BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044169
         (742 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  855 bits (2210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/723 (57%), Positives = 535/723 (73%), Gaps = 34/723 (4%)

Query: 21  PVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGIS 80
           P++    P K    K   V       +AC LF K+PKR G+S ++   +G  +  E+G+ 
Sbjct: 32  PIISASGPYKGCMSKGNVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVK 91

Query: 81  RNGYSTRNDS----FPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELG 136
             G+ TRN++    F  GF                     +Q+V   LS+C RE C+ELG
Sbjct: 92  EAGFFTRNETPHVEFGGGFPH-------------------RQYVFSALSFCGREGCVELG 132

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           RR+H  + K  +  D+FV  SL++MYAKCG++ S V V  +M  LD A+CNCL++ YA+N
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARN 192

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F QAF  F+++  +  +PNHYTYSTMLA+CG++SAI EGKQLHA  +K+QYLS+TAV 
Sbjct: 193 GFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVG 252

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NALLT+Y KCGMME+AE VFE L QRN+ISWTA INGF QHGD++K L+   +MRE GI+
Sbjct: 253 NALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           PNE+TF++ LASC  +++   G MFH QVIK+GMA G FVGTAI+DMYSGLGE+ EA+KQ
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
            K+MG++AS+VSWNA IAG+  N+K E+A+EAF +MV+ D AC+EFTYS+I KACS  PS
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPS 432

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LAT  QIHSR++KS  ESN+HV SSLIEAY +CGS E+A +VF+Q++ ADVVSWNS+IKA
Sbjct: 433 LATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKA 492

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           YSQNG   KAI L  KM+ EG +PT+ TFL VLSACSHSGLVQ+GQ+ F+SMV++Y I P
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           EE H SCMVD+LGRAG+LE AL FI  L +KPTA IWRPL AACR +S+L+MAE+++++I
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKI 612

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           L+L+P+DA VYVTLSNMYAE G  ADAE QR+LM+ KEISKEPGCSWIEV NK+Y+FFS 
Sbjct: 613 LDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSH 672

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHTD-----------NEKEDRVLYHSERLAVGFGLI 725
           +K+H EMPKVYEKLKQL++QI+DIG++              KE  +LYHSE+LAV FGL+
Sbjct: 673 DKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEKLAVCFGLL 732

Query: 726 SLP 728
           SLP
Sbjct: 733 SLP 735



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 165/538 (30%), Positives = 283/538 (52%), Gaps = 32/538 (5%)

Query: 128  SREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
            +R+  L  GR  HA +    +    +  A L++ Y +CG + +   +  ++P  +I    
Sbjct: 814  ARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWI 873

Query: 188  CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
             L    A+   +++A S F ++    ++PN +   ++L  CG LS    G+ +H   +K 
Sbjct: 874  VLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKN 933

Query: 248  QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
             + S   + +AL+ MY KCG +E A  VF+ +V ++++   A+++G+ QHG   + L LV
Sbjct: 934  SFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLV 993

Query: 308  CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
              M++ G+ PN  ++   +A  + + +  M                              
Sbjct: 994  QKMQQAGVKPNVVSWNTLIAGFSQVGDKSM------------------------------ 1023

Query: 368  GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
              + E  + +   G     VSW + I+GF +N    E  +AF +M+         T SS+
Sbjct: 1024 --VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSL 1081

Query: 428  LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            L AC+ + +L   ++IH   +    E +V+V S+L++ Y KCG   +A+ +F  +   + 
Sbjct: 1082 LPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNT 1141

Query: 488  VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
            V+WNS+I  Y+ +G   +AI LF +M     +  + TF AVL+ACSH+G+V+ G+ +F  
Sbjct: 1142 VTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXK 1201

Query: 548  MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            M ++Y I P   HY+CMVDLLGRAGKL  A   I  +P++P   +W  L  ACR H +++
Sbjct: 1202 MQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIE 1261

Query: 608  MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
            +AE  ++ + EL+P+     + LSN+YA+AG   +A + +K+MK ++  K PGCSWIE
Sbjct: 1262 LAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 189/424 (44%), Gaps = 36/424 (8%)

Query: 112  ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
            E L   QFV+  +L  C        G   H +I K +   D ++ ++L+ MY+KCG ++ 
Sbjct: 898  EGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEK 957

Query: 171  MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
               V   +   D+   N +++GYA++    +A     K+    V+PN  +++T++A    
Sbjct: 958  ACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIA---G 1014

Query: 231  LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
             S + +               K+ VS     M                 V+ +V+SWT++
Sbjct: 1015 FSQVGD---------------KSMVSEVFRLMTANG-------------VEPDVVSWTSV 1046

Query: 291  INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
            I+GF Q+    +       M + G  P+  T +  L +C ++ N   G   H   +  G+
Sbjct: 1047 ISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGV 1106

Query: 351  ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                +V +A+VDMY+  G I EAK  L  M    ++V+WN+ I G+  +    EAIE F+
Sbjct: 1107 EKDVYVRSALVDMYAKCGYISEAKI-LFYMMPERNTVTWNSLIFGYANHGYCNEAIELFN 1165

Query: 411  QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESNVHVGSSLIEAYNKC 469
            QM  +D   D  T++++L ACS    +   E +  ++  K + E  +   + +++   + 
Sbjct: 1166 QMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRA 1225

Query: 470  GSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLA 527
            G   +A  +   +    D   W +++ A   +G    A +  E +  +E   P +S  L+
Sbjct: 1226 GKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLS 1285

Query: 528  VLSA 531
             L A
Sbjct: 1286 NLYA 1289



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 97/201 (48%), Gaps = 10/201 (4%)

Query: 110  SLESLLDKQF------VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
            + + +LD+ F      +  +L  C+    L  G+  H       V  D +V ++LV+MYA
Sbjct: 1062 AFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYA 1121

Query: 164  KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
            KCG I     +   MP  +  + N L+ GYA +   ++A   F +++  D + +H T++ 
Sbjct: 1122 KCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTA 1181

Query: 224  MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-V 280
            +L  C     ++ G+ L  + M+ +Y  +  + +   ++ +  + G + +A  + + + V
Sbjct: 1182 VLNACSHAGMVELGESLFXK-MQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPV 1240

Query: 281  QRNVISWTAIINGFKQHGDYE 301
            + +   W A++   + HG+ E
Sbjct: 1241 EPDKFVWGALLGACRNHGNIE 1261



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/412 (20%), Positives = 159/412 (38%), Gaps = 51/412 (12%)

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           KSMV      P  +   C+C++    +    + A  F  KL    ++P    +  +LA C
Sbjct: 542 KSMVQDYSIQP--EETHCSCMVDILGRAGQLENALDFIKKLT---MKPTASIWRPLLAAC 596

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV---- 284
              S +   + +  + + L+    T V   L  MY + G   DAE+    + Q+ +    
Sbjct: 597 RYNSNLQMAEYVAEKILDLEPNDAT-VYVTLSNMYAEVGRWADAENQRRLMEQKEISKEP 655

Query: 285 -ISWTAIINGF-------KQHGD----YEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             SW  + N         K H +    YEK  +LV  +++ G  P     T  +    S 
Sbjct: 656 GCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPP----TTTVLHPESR 711

Query: 333 RNSHMGYMFHAQVIKRGMALGDFV-GTAI---------VDMYSGLGEIWEAKKQLKEMGK 382
           +      ++H++ +     L     G  I         +D YS +  I     +      
Sbjct: 712 QPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYIPTPL 771

Query: 383 SAS----SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +A+    S+   A +   +RN  T    ++ S            TY+  +   +   +L 
Sbjct: 772 AAAAAMQSLINRANVYRVYRNISTHRTFQSSSD-----------TYAKAIDMYARDRALY 820

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +H+ +V        +  + L+  Y +CG   +A ++F ++   ++  W  +  A +
Sbjct: 821 RGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACA 880

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           + G   +A+  F +M  EG+RP      ++L AC H    + G+ +   ++K
Sbjct: 881 RRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 932


>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/704 (38%), Positives = 394/704 (55%), Gaps = 94/704 (13%)

Query: 21  PVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGIS 80
           P++    P K    K   V       +AC LF K+PKR G+S ++   +G  +  E+G+ 
Sbjct: 32  PIISASGPYKGCMSKGNVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVK 91

Query: 81  RNGYSTRNDS----FPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELG 136
             G+ TRN++    F  GF                     +Q+V   LS+C RE C+ELG
Sbjct: 92  EAGFFTRNETPHVEFGGGFPH-------------------RQYVFSALSFCGREGCVELG 132

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           RR+H  + K  +  D+FV  SL++MYAKCG++ S V V  +M  LD A+CNCL++ YA+N
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARN 192

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F QAF  F+++  +  +PNHYTYSTMLA+CG++SAI EGKQLHA  +K+QYLS+TAV 
Sbjct: 193 GFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVG 252

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NALLT+Y KCGMME+AE VFE L QRN+ISWTA INGF QHGD++K L+   +MRE GI+
Sbjct: 253 NALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312

Query: 317 PNEYTFTVALASCA--------------------------------------SLR----- 333
           PNE+TF++ LASC                                       SLR     
Sbjct: 313 PNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFV 372

Query: 334 ------------NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
                       +   G   H  ++K       ++ +A++ MYS  G + +A +    + 
Sbjct: 373 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI- 431

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
              + VSWN  IAG             FSQM+         T SS+L AC+ + +L   +
Sbjct: 432 --PNVVSWNTLIAG-------------FSQMLDQGFCPSSVTISSLLPACTNVANLRHGK 476

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           +IH   +    E +V+V S+L++ Y KCG   +A+ +F  +   + V+WNS+I  Y+ +G
Sbjct: 477 EIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHG 536

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
              +AI LF +M     +  + TF AVL+ACSH+G+V+ G+ +F  M ++Y I P   HY
Sbjct: 537 YCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHY 596

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           +CMVDLLGRAGKL  A   I  +P++P   +W  L  ACR H ++++AE  ++ + EL+P
Sbjct: 597 ACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEP 656

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
           +     + LSN+YA+AG   +A + +K+MK ++  K PGCSWIE
Sbjct: 657 ESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 700


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/636 (36%), Positives = 373/636 (58%), Gaps = 13/636 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +L  C+  E LE G++ HA + +     + +V  ++++MY KCG ++  + V 
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   ++ S   ++AG+A++   D+AF FF K+    ++PN  T+ ++L  C S SA+ 
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+Q+    ++  Y S   V  ALL+MY KCG ++DA  VFE + ++NV++W A+I  + 
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH  Y+  L     + ++GI PN  TFT  L  C S  +  +G   H  ++K G+     
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A+V M+   G++  AK    +M K    VSWN  IAGF ++ K + A + F  M  +
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ T++ +L AC+   +L    ++H+ I ++ F+ +V VG+ LI  Y KCGS EDA
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            +VF +L   +V SW SMI  Y+Q+GR ++A+ LF +M  EG++P   TF+  LSAC+H+
Sbjct: 670 HQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+++G   F+SM KE+ I P   HY CMVDL GRAG L  A+ FI  + ++P + +W  
Sbjct: 730 GLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC+ H ++++AE  +++ LELDP+D  V+V LSN+YA AG+  +  + RK+M  + +
Sbjct: 789 LLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K+PG SWIEV  K++ F+S +K+H +  +++ +L++L  ++  +G+            D
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           NEKE  + YHSERLA+ +GL+  P       S+ L 
Sbjct: 909 NEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 279/552 (50%), Gaps = 20/552 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK+  + +L+ C+    ++ GR  + LI K     D FV  +L+NM+ KCGDI     V 
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  D+ +   ++ G A++  F QA + F +++   VQP+   + ++L  C    A++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++HA+  ++ + ++  V  A+L+MY KCG MEDA  VF+ +  RNV+SWTA+I GF 
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QHG  ++       M E GI+PN  TF   L +C+S      G      +I+ G    D 
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++ MY+  G + +A +  +++ K  + V+WNA I  + ++++ + A+  F  +++ 
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T++SIL  C    SL   + +H  I+K+  ES++HV ++L+  +  CG    A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + +F+ +   D+VSWN++I  + Q+G+ + A   F+ M   GI+P   TF  +L+AC+  
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSC-------MVDLLGRAGKLEIALIFISNLPIKP 588
             + +G+++          L  EA + C       ++ +  + G +E A      LP K 
Sbjct: 629 EALTEGRRLHA--------LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KK 679

Query: 589 TAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               W  +      H   K A E   +   E    D   +V   +  A AGL    E   
Sbjct: 680 NVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI--EEGLH 737

Query: 648 KLMKMKEISKEP 659
               MKE + EP
Sbjct: 738 HFQSMKEFNIEP 749



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 270/494 (54%), Gaps = 5/494 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q    +L  C + + L  G R +  I K+ V  D F+  +L+NMYAKCG+  S   +  
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD 169

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            M   D+ S N LL GY ++ L+++AF    ++    V+P+  T+ +ML  C     +D+
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G++L+   +K  + +   V  AL+ M+IKCG + DA  VF+ L  R++++WT++I G  +
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG +++   L   M E+G+ P++  F   L +C        G   HA++ + G     +V
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GTAI+ MY+  G + E   ++ ++ K  + VSW A IAGF ++ + +EA   F++M+ + 
Sbjct: 350 GTAILSMYTKCGSM-EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +  T+ SIL ACS   +L   +QI   I+++ + S+  V ++L+  Y KCGS +DA 
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF +++  +VV+WN+MI AY Q+ +   A+  F+ ++ EGI+P +STF ++L+ C  S 
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYS-CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            ++ G+ V   ++K    L  + H S  +V +    G L  A    +++P +     W  
Sbjct: 529 SLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS-WNT 585

Query: 596 LFAACRCHSDLKMA 609
           + A    H   ++A
Sbjct: 586 IIAGFVQHGKNQVA 599



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 214/396 (54%), Gaps = 2/396 (0%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D    N +L   +K   F++A     ++D   +Q    TYS +L +C     + +G++++
Sbjct: 74  DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
               K        + N L+ MY KCG    A+ +F+ + +++V SW  ++ G+ QHG YE
Sbjct: 134 NHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +  +L   M +D + P++ TF   L +CA  RN   G   +  ++K G     FVGTA++
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +M+   G+I +A K    +  +   V+W + I G  R+ + ++A   F +M       D+
Sbjct: 254 NMHIKCGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
             + S+L+AC+   +L   +++H+R+ +  +++ ++VG++++  Y KCGS EDA  VF  
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   +VVSW +MI  ++Q+GR  +A + F KM+  GI P   TF+++L ACS    ++ G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           Q++ + ++ E G   ++   + ++ +  + G L+ A
Sbjct: 433 QQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDA 467


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/636 (36%), Positives = 373/636 (58%), Gaps = 13/636 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +L  C+  E LE G++ HA + +     + +V  ++++MY KCG ++  + V 
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   ++ S   ++AG+A++   D+AF FF K+    ++PN  T+ ++L  C S SA+ 
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALK 430

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+Q+    ++  Y S   V  ALL+MY KCG ++DA  VFE + ++NV++W A+I  + 
Sbjct: 431 RGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH  Y+  L     + ++GI PN  TFT  L  C S  +  +G   H  ++K G+     
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLH 550

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A+V M+   G++  AK    +M K    VSWN  IAGF ++ K + A + F  M  +
Sbjct: 551 VSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVAFDYFKMMQES 609

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ T++ +L AC+   +L    ++H+ I ++ F+ +V VG+ LI  Y KCGS EDA
Sbjct: 610 GIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDA 669

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            +VF +L   +V SW SMI  Y+Q+GR ++A+ LF +M  EG++P   TF+  LSAC+H+
Sbjct: 670 HQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHA 729

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+++G   F+SM KE+ I P   HY CMVDL GRAG L  A+ FI  + ++P + +W  
Sbjct: 730 GLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGA 788

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC+ H ++++AE  +++ LELDP+D  V+V LSN+YA AG+  +  + RK+M  + +
Sbjct: 789 LLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGV 848

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K+PG SWIEV  K++ F+S +K+H +  +++ +L++L  ++  +G+            D
Sbjct: 849 VKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVED 908

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           NEKE  + YHSERLA+ +GL+  P       S+ L 
Sbjct: 909 NEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLR 944



 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 280/552 (50%), Gaps = 20/552 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK+  + +L+ C+    ++ GR  + LI K     D FV  +L+NM+ KCGDI     V 
Sbjct: 210 DKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVF 269

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  D+ +   ++ G A++  F QA + F +++   VQP+   + ++L  C    A++
Sbjct: 270 DNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALE 329

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++HA+  ++ + ++  V  A+L+MY KCG MEDA  VF+ +  RNV+SWTA+I GF 
Sbjct: 330 QGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFA 389

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QHG  ++       M E GI+PN  TF   L +C+S      G      +I+ G    D 
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++ MY+  G + +A +  +++ K  + V+WNA I  + ++++ + A+  F  +++ 
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQ-NVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T++SIL  C    SL   + +H  I+K+  ES++HV ++L+  +  CG    A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + +F+ +   D+VSWN++I  + Q+G+ + A   F+ M   GI+P   TF  +L+AC+  
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSC-------MVDLLGRAGKLEIALIFISNLPIKP 588
             + +G+++          L  EA + C       ++ +  + G +E A      LP K 
Sbjct: 629 EALTEGRRLHA--------LITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KK 679

Query: 589 TAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               W  + A    H   K A E   +   E    D   +V   +  A AGL    E   
Sbjct: 680 NVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLI--EEGLH 737

Query: 648 KLMKMKEISKEP 659
               MKE + EP
Sbjct: 738 HFQSMKEFNIEP 749



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 270/494 (54%), Gaps = 5/494 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q    +L  C + + L  G R +  I K+ V  D F+  +L+NMYAKCG+  S   +  
Sbjct: 110 RQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFD 169

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            M   D+ S N LL GY ++ L+++AF    ++    V+P+  T+ +ML  C     +D+
Sbjct: 170 DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G++L+   +K  + +   V  AL+ M+IKCG + DA  VF+ L  R++++WT++I G  +
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLAR 289

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG +++   L   M E+G+ P++  F   L +C        G   HA++ + G     +V
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GTAI+ MY+  G + E   ++ ++ K  + VSW A IAGF ++ + +EA   F++M+ + 
Sbjct: 350 GTAILSMYTKCGSM-EDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG 408

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +  T+ SIL ACS   +L   +QI   I+++ + S+  V ++L+  Y KCGS +DA 
Sbjct: 409 IEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAH 468

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF +++  +VV+WN+MI AY Q+ +   A+  F+ ++ EGI+P +STF ++L+ C  S 
Sbjct: 469 RVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYS-CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            ++ G+ V   ++K    L  + H S  +V +    G L  A    +++P +     W  
Sbjct: 529 SLELGKWVHFLIMK--AGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVS-WNT 585

Query: 596 LFAACRCHSDLKMA 609
           + A    H   ++A
Sbjct: 586 IIAGFVQHGKNQVA 599



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 214/396 (54%), Gaps = 2/396 (0%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D    N +L   +K   F++A     ++D   +Q    TYS +L +C     + +G++++
Sbjct: 74  DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
               K        + N L+ MY KCG    A+ +F+ + +++V SW  ++ G+ QHG YE
Sbjct: 134 NHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYE 193

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +  +L   M +D + P++ TF   L +CA  RN   G   +  ++K G     FVGTA++
Sbjct: 194 EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALI 253

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +M+   G+I +A K    +  +   V+W + I G  R+ + ++A   F +M       D+
Sbjct: 254 NMHIKCGDIGDATKVFDNL-PTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
             + S+L+AC+   +L   +++H+R+ +  +++ ++VG++++  Y KCGS EDA  VF  
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   +VVSW +MI  ++Q+GR  +A + F KM+  GI P   TF+++L ACS    ++ G
Sbjct: 373 VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRG 432

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           Q++ + ++ E G   ++   + ++ +  + G L+ A
Sbjct: 433 QQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDA 467


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/636 (36%), Positives = 363/636 (57%), Gaps = 12/636 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +LS CS    L  GR  H  + +  +  D  V  +L++MYAKCG ++    V 
Sbjct: 128 DKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVF 187

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D  S   L   YA++   +++   +  +    V+P+  TY  +L+ CGSL+A++
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GKQ+HA  ++ +Y S   VS AL  MY+KCG  +DA  VFE L  R+VI+W  +I GF 
Sbjct: 248 KGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV 307

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
             G  E+       M E+G+ P+  T+T  L++CA       G   HA+  K G+     
Sbjct: 308 DSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A+++MYS  G + +A++    M K    VSW   +  +    +  E+   F QM++ 
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTTLLGRYADCDQVVESFTTFKQMLQQ 426

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++ TY  +LKACS   +L   ++IH+ +VK+   +++ V ++L+  Y KCGS EDA
Sbjct: 427 GVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF  ++  DVV+WN++I    QNGR  +A+  +E M  EG+RP  +TF+ VLSAC   
Sbjct: 487 IRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVC 546

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            LV++G++ F  M K+YGI+P E HY+CMVD+L RAG L  A   I  +P+KP+A +W  
Sbjct: 547 NLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGA 606

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L AACR H ++++ E  ++  L+L+P +A +YV+LS +YA AG+  D  + RK MK + +
Sbjct: 607 LLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGV 666

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            KEPG SWIE+  +++ F ++++SH    ++Y +L+ L +Q++ +G+            D
Sbjct: 667 KKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDD 726

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             KE  V +HSE+LA+ +GLIS P       S+ L 
Sbjct: 727 EGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLR 762



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 257/485 (52%), Gaps = 3/485 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D    +++L  C + + L +G++ H  I +  V  + ++T +L+ +YA CG +     +
Sbjct: 26  VDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQL 85

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +     + S N +++GYA   L  +AF+ F  +    ++P+ +T+ ++L+ C S + +
Sbjct: 86  FDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVL 145

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G+++H + M+    + T V NAL++MY KCG + DA  VF+ +  R+ +SWT +   +
Sbjct: 146 NWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAY 205

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G  E+ L+    M ++ + P+  T+   L++C SL     G   HA +++       
Sbjct: 206 AESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDV 265

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V TA+  MY   G   +A +++ E       ++WN  I GF  + + EEA   F +M+ 
Sbjct: 266 RVSTALTKMYMKCGAFKDA-REVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
              A D  TY+++L AC+    LA  ++IH+R  K    S+V  G++LI  Y+K GS +D
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF ++   DVVSW +++  Y+   +  ++   F++M+ +G++    T++ VL ACS+
Sbjct: 385 ARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSN 444

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              ++ G+++   +VK  G+L + A  + ++ +  + G +E A+     + ++     W 
Sbjct: 445 PVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVV-TWN 502

Query: 595 PLFAA 599
            L   
Sbjct: 503 TLIGG 507



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 207/384 (53%), Gaps = 3/384 (0%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           Q + Y Y  +L  C     +  GKQ+H   ++        ++N LL +Y  CG + +A  
Sbjct: 25  QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQ 84

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F+    ++V+SW  +I+G+   G  ++   L  LM+++ ++P+++TF   L++C+S   
Sbjct: 85  LFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAV 144

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            + G   H +V++ G+A    VG A++ MY+  G + +A++    M  S   VSW     
Sbjct: 145 LNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA-SRDEVSWTTLTG 203

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
            +  +   EE+++ +  M++        TY ++L AC  L +L   +QIH+ IV+S++ S
Sbjct: 204 AYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHS 263

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +V V ++L + Y KCG+++DA  VF  L+  DV++WN+MI+ +  +G+  +A   F +M+
Sbjct: 264 DVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRML 323

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            EG+ P  +T+  VLSAC+  G +  G+++     K+ G++ +    + ++++  +AG +
Sbjct: 324 EEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSM 382

Query: 575 EIALIFISNLPIKPTAPIWRPLFA 598
           + A      +P +     W  L  
Sbjct: 383 KDARQVFDRMPKRDVVS-WTTLLG 405



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 44/281 (15%)

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     D + Y  +L++C     LA  +Q+H  I++   + NV++ ++L++ Y  CGS  
Sbjct: 21  RKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVN 80

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +A ++F + +   VVSWN MI  Y+  G A++A  LF  M  E + P   TF+++LSACS
Sbjct: 81  EARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACS 140

Query: 534 HS-----------------------------------GLVQDGQKVFESMVKEYGILPEE 558
                                                G V+D ++VF++M        +E
Sbjct: 141 SPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASR-----DE 195

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
             ++ +      +G  E +L     +    ++P+   +  + +AC   + L+  + I   
Sbjct: 196 VSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAH 255

Query: 616 ILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           I+E +   D  V   L+ MY + G   DA E  + +  +++
Sbjct: 256 IVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDV 296


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/631 (36%), Positives = 376/631 (59%), Gaps = 12/631 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I VL+  S    L+ G+  H+ I       D  V  +LV MYAKCG  K    V +++  
Sbjct: 231 ISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVN 290

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ + N ++ G A+   +++A   + ++    V PN  TY  +L  C + +A+  GK++
Sbjct: 291 RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEI 350

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H++  K  + S   V NAL++MY +CG ++DA  VF+ +V+++VISWTA+I G  + G  
Sbjct: 351 HSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFG 410

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L +   M++ G++PN  T+T  L +C+S      G   H QV++ G+A    VG  +
Sbjct: 411 AEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTL 470

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V+MYS  G + +A++    M +    V++NA I G+  +   +EA++ F ++       D
Sbjct: 471 VNMYSMCGSVKDARQVFDRMIQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPD 529

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + TY ++L AC+   SL    +IH+ + K  F S+  VG++L+  Y KCGS+ DA  VF 
Sbjct: 530 KVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFE 589

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++T  +V+SWN++I   +Q+GR + A+ LFE+M +EG++P   TF+++LSACSH+GL+++
Sbjct: 590 KMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEE 649

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ F SM +++ I+P   HY CMVDLLGRAG+L+ A   I  +P +    IW  L  AC
Sbjct: 650 GRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGAC 709

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H ++ +AE  ++  L+LD D+A VYV LS+MYA AG+   A + RKLM+ + ++KEPG
Sbjct: 710 RIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPG 769

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
            SWI+V +K++ F ++++SH +  K+Y +L +L   ++  G+            + EKE+
Sbjct: 770 RSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKEN 829

Query: 710 RVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            V +HSERLA+ +GLIS P   +    + L 
Sbjct: 830 AVCHHSERLAIAYGLISTPPGTRIHIFKNLR 860



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 275/534 (51%), Gaps = 7/534 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++  LS C     LE GR  H    +  +  D  V   ++NMYAKCG I+    V 
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M    + S    + GYA     + AF  F K++   V PN  TY ++L    S +A+ 
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H++ +   + S TAV  AL+ MY KCG  +D   VFE LV R++I+W  +I G  
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G +E+   +   M+ +G+ PN+ T+ + L +C +    H G   H++V K G      
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++ MYS  G I +A+    +M +    +SW A I G  ++    EA+  + +M + 
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRK-DVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  TY+SIL ACS   +L    +IH ++V++   ++ HVG++L+  Y+ CGS +DA
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            +VF ++   D+V++N+MI  Y+ +   ++A+ LF+++  EG++P   T++ +L+AC++S
Sbjct: 484 RQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANS 543

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G ++  +++  ++V++ G   + +  + +V    + G    A I    +  K     W  
Sbjct: 544 GSLEWAREI-HTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISWNA 601

Query: 596 LFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
           +      H   + A +   +  +E    D   +V+L +  + AGL    EE R+
Sbjct: 602 IIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGL---LEEGRR 652



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 292/576 (50%), Gaps = 13/576 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C   + L  GR+ H  I +     DQ+   +L+NMY +CG I+    V K++ Y
Sbjct: 27  MKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY 86

Query: 181 LD--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           ++  + S N ++ GY +    ++A     ++    + P+  T  + L+ C S  A++ G+
Sbjct: 87  MERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGR 146

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H Q M+   L    V+N +L MY KCG +E+A  VF+ + +++V+SWT  I G+   G
Sbjct: 147 EIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCG 206

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             E    +   M ++G+ PN  T+   L + +S      G   H++++  G      VGT
Sbjct: 207 RSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGT 266

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V MY+  G  ++  +Q+ E   +   ++WN  I G       EEA E ++QM R    
Sbjct: 267 ALVKMYAKCGS-YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            ++ TY  +L AC    +L   ++IHSR+ K+ F S++ V ++LI  Y++CGS +DA  V
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   DV+SW +MI   +++G   +A+ ++++M   G+ P   T+ ++L+ACS    +
Sbjct: 386 FDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAAL 445

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G+++ + +V E G+  +    + +V++    G ++ A      + I+     +  +  
Sbjct: 446 EWGRRIHQQVV-EAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIG 503

Query: 599 ACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
               H+  K A  +  ++ E  L PD    Y+ + N  A +G    A E   L++     
Sbjct: 504 GYAAHNLGKEALKLFDRLQEEGLKPDK-VTYINMLNACANSGSLEWAREIHTLVR----- 557

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           K    S   V N +   +++  S S+   V+EK+ +
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTK 593



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 255/534 (47%), Gaps = 56/534 (10%)

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           D A      L     Q N   Y  ML  C  +  +  G+Q+H   ++ + +      NAL
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 260 LTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           + MYI+CG +E+A  V++ L  ++R V SW A++ G+ Q+G  EK L+L+  M++ G+ P
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +  T    L+SC S      G   H Q ++ G+     V   I++MY+  G I EA++  
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M K  S VSW   I G+    ++E A E F +M +     +  TY S+L A S   +L
Sbjct: 185 DKMEKK-SVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              + +HSRI+ +  ES+  VG++L++ Y KCGS++D  +VF +L   D+++WN+MI   
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 303

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS---------------------- 535
           ++ G   +A  ++ +M  EG+ P   T++ +L+AC +S                      
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363

Query: 536 -------------GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
                        G ++D + VF+ MV++  I      ++ M+  L ++G    AL    
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVI-----SWTAMIGGLAKSGFGAEALTVYQ 418

Query: 583 NLP---IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAG 638
            +    ++P    +  +  AC   + L+    I +Q++E     DA V  TL NMY+  G
Sbjct: 419 EMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
              DA +    M  ++I           YN +   ++ +    E  K++++L++
Sbjct: 479 SVKDARQVFDRMIQRDIV---------AYNAMIGGYAAHNLGKEALKLFDRLQE 523


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/693 (35%), Positives = 384/693 (55%), Gaps = 36/693 (5%)

Query: 48   ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGY-STRNDSFPDGFIDDGCSNTVPV 106
            A +LFN  PKR  L + + I  GY   E++G +   Y   +++    G +          
Sbjct: 439  ARELFNTMPKR-DLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVT--------- 488

Query: 107  TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                          + +LS C+       G+  H  I ++ +  +  +  +L+NMY +CG
Sbjct: 489  -------------FLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535

Query: 167  DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
             I     V +     DI S N ++AG+A++  ++ A+  FL++    ++P+  T++++L 
Sbjct: 536  SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595

Query: 227  ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
             C +  A++ G+Q+H   ++        + NAL+ MYI+CG ++DA  VF  L  RNV+S
Sbjct: 596  GCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS 655

Query: 287  WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
            WTA+I GF   G+  K   L   M+ DG  P + TF+  L +C S      G    A ++
Sbjct: 656  WTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715

Query: 347  KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
              G  L   VG A++  YS  G + +A+K   +M  +   +SWN  IAG+ +N     A+
Sbjct: 716  NSGYELDTGVGNALISAYSKSGSMTDARKVFDKM-PNRDIMSWNKMIAGYAQNGLGGTAL 774

Query: 407  EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            +   QM       ++F++ SIL ACS   +L   +++H+ IVK K + +V VG++LI  Y
Sbjct: 775  QFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMY 834

Query: 467  NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
             KCGS E+A+ VF   T  +VV+WN+MI AY+Q+G A KA+  F  M  EGI+P  STF 
Sbjct: 835  AKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFT 894

Query: 527  AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
            ++LSAC+HSGLV +G ++F S+  ++G+ P   HY C+V LLGRAG+ + A   I+ +P 
Sbjct: 895  SILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPF 954

Query: 587  KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
             P A +W  L  ACR H ++ +AE  +   L+L+  + AVYV LSN+YA AG   D  + 
Sbjct: 955  PPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKI 1014

Query: 647  RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--- 703
            R++M+ + I KEPG SWIEV N I+ F + ++SH E  ++YE+LK+L  ++E  G++   
Sbjct: 1015 RRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDT 1074

Query: 704  -------DNEKEDRVL-YHSERLAVGFGLISLP 728
                   D E ++  L  HSERLA+ +GL+  P
Sbjct: 1075 QYVLHNLDKEHQETSLCTHSERLAIAYGLLKTP 1107



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 243/438 (55%), Gaps = 1/438 (0%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           ++++   + VL+ CS  + L  G   H+ I++     D  +  SL++MYA+CGD+     
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +   MP  D+ S N ++AGYA+     +A   + ++    V+P   T+  +L+ C + SA
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +GK +H   ++    S   ++NAL+ MY +CG + +A++VFEG   R++ISW ++I G
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             QHG YE   +L   M+++G++P++ TF   L  C +     +G   H  +I+ G+ L 
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +G A+++MY   G + +A +    + +  + +SW A I GF    +  +A E F QM 
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSL-RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQ 680

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +     + T+SSILKAC     L   +++ + I+ S +E +  VG++LI AY+K GS  
Sbjct: 681 NDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMT 740

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA +VF ++   D++SWN MI  Y+QNG    A+    +M  +G+     +F+++L+ACS
Sbjct: 741 DARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACS 800

Query: 534 HSGLVQDGQKVFESMVKE 551
               +++G++V   +VK 
Sbjct: 801 SFSALEEGKRVHAEIVKR 818



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 267/549 (48%), Gaps = 20/549 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           ++++  C+R+  L   +R HA + +  V  D F++  L+NMY KC  +     V  +MP 
Sbjct: 86  VDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR 145

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N L++ YA+     +AF  F ++      P+  TY ++L  C S + ++ GK++
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKI 205

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H++ ++  Y     V N+LL MY KC  +  A  VF G+ +R+V+S+  ++  + Q    
Sbjct: 206 HSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+ + L   M  +GI P++ T+   L +  +      G   H   +  G+     VGTA+
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTAL 325

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
             M+   G++  AK+ L+        V +NA IA   ++   EEA E + QM  +    +
Sbjct: 326 ATMFVRCGDVAGAKQALEAFADR-DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMN 384

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             TY S+L ACS   +L   E IHS I +    S+V +G+SLI  Y +CG    A  +F+
Sbjct: 385 RTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFN 444

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D++SWN++I  Y++     +A+ L+++M  EG++P   TFL +LSAC++S    D
Sbjct: 445 TMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSD 504

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+ + E +++  GI       + ++++  R G +  A         +     W  + A  
Sbjct: 505 GKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIIS-WNSMIAGH 562

Query: 601 RCHSDLKMAE--FISKQILELDPDD---AAVYVTLSN------------MYAEAGLQADA 643
             H   + A   F+  +   L+PD    A+V V   N            +  E+GLQ D 
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622

Query: 644 EEQRKLMKM 652
                L+ M
Sbjct: 623 NLGNALINM 631



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 258/530 (48%), Gaps = 24/530 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A Q+F K P+R  +S + LI        ++G  +  +    +    GFI           
Sbjct: 136 AHQVFLKMPRRDVISWNSLI----SCYAQQGFKKKAFQLFEEMQTAGFIPS--------- 182

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                    K   I +L+ C     LE G++ H+ I +     D  V  SL+NMY KC D
Sbjct: 183 ---------KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCED 233

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           + S   V   +   D+ S N +L  YA+ A  ++    F ++    + P+  TY  +L  
Sbjct: 234 LPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDA 293

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
             + S +DEGK++H   +     S   V  AL TM+++CG +  A+   E    R+V+ +
Sbjct: 294 FTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVY 353

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I    QHG YE+       MR DG+  N  T+   L +C++ +    G + H+ + +
Sbjct: 354 NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE 413

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G +    +G +++ MY+  G++  A++    M K    +SWNA IAG+ R +   EA++
Sbjct: 414 VGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR-DLISWNAIIAGYARREDRGEAMK 472

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            + QM          T+  +L AC+   + +  + IH  I++S  +SN H+ ++L+  Y 
Sbjct: 473 LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYR 532

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           +CGS  +A+ VF    A D++SWNSMI  ++Q+G    A  LF +M  EG+ P   TF +
Sbjct: 533 RCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFAS 592

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           VL  C +   ++ G+++   ++ E G+  +    + ++++  R G L+ A
Sbjct: 593 VLVGCKNPEALELGRQI-HMLIIESGLQLDVNLGNALINMYIRCGSLQDA 641



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 191/403 (47%), Gaps = 3/403 (0%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
            + N   Y  ++  C    ++ E K++HAQ ++        +SN L+ MY+KC  + DA 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VF  + +R+VISW ++I+ + Q G  +K  +L   M+  G  P++ T+   L +C S  
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
               G   H+++I+ G      V  ++++MY    ++  A++    + +    VS+N  +
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR-DVVSYNTML 256

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
             + +    EE I  F QM       D+ TY ++L A +    L   ++IH   V     
Sbjct: 257 GLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLN 316

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S++ VG++L   + +CG    A++        DVV +N++I A +Q+G   +A   + +M
Sbjct: 317 SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
             +G+    +T+L+VL+ACS S  +  G+ +  S + E G   +    + ++ +  R G 
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGE-LIHSHISEVGHSSDVQIGNSLISMYARCGD 435

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           L  A    + +P K     W  + A      D   A  + KQ+
Sbjct: 436 LPRARELFNTMP-KRDLISWNAIIAGYARREDRGEAMKLYKQM 477


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/636 (36%), Positives = 367/636 (57%), Gaps = 12/636 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +LS CS    L  GR  H  + +  +  +  V  +L++MYAKCG ++    V 
Sbjct: 144 DKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVF 203

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D  S   L   YA++    ++   +  +    V+P+  TY  +L+ CGSL+A++
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GKQ+HAQ ++ ++ S   VS AL  MYIKCG ++DA  VFE L  R+VI+W  +I G  
Sbjct: 264 KGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLV 323

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
             G  E+   +   M ++ + P+  T+   L++CA       G   HA+ +K G+     
Sbjct: 324 DSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR 383

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A+++MYS  G + +A++    M K    VSW A + G+    +  E+   F +M++ 
Sbjct: 384 FGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++ TY  +LKACS   +L   ++IH+ +VK+   +++ V ++L+  Y KCGS EDA
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RV   ++  DVV+WN++I   +QNGR  +A+  FE M  E +RP  +TF+ V+SAC   
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            LV++G++ F SM K+YGI+P E HY+CMVD+L RAG L  A   I  +P KP+A +W  
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L AACR H ++++ E  ++Q L+L+P +A  YV+LS +YA AG+  D  + RKLMK + +
Sbjct: 623 LLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DN 705
            KEPG SWIEV  +++ F + ++SH    ++Y +L+ L +QI+ +G+           D 
Sbjct: 683 KKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQ 742

Query: 706 EKEDR-VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           E ++R V +HSE+LA+ +GLIS P +     S+ L 
Sbjct: 743 EGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLR 778



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 254/466 (54%), Gaps = 2/466 (0%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           S +D    +++L  C + + L +G++ H  I +  +  + ++  +L+ +Y  CG +    
Sbjct: 40  SQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEAR 99

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +  +     + S N +++GYA   L  +AF+ F  +    ++P+ +T+ ++L+ C S +
Sbjct: 100 RLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A++ G+++H + M+    +   V NAL++MY KCG + DA  VF+ +  R+ +SWT +  
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + + G  ++ L+    M ++G+ P+  T+   L++C SL     G   HAQ+++     
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHS 279

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V TA+  MY   G + +A +++ E   +   ++WN  I G   + + EEA   F +M
Sbjct: 280 DVRVSTALTKMYIKCGAVKDA-REVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRM 338

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           ++   A D  TY +IL AC+    LA  ++IH+R VK    S+V  G++LI  Y+K GS 
Sbjct: 339 LKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSM 398

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           +DA +VF ++   DVVSW +++  Y+  G+  ++   F+KM+ +G+     T++ VL AC
Sbjct: 399 KDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKAC 458

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           S+   ++ G+++   +VK  GI  + A  + ++ +  + G +E A+
Sbjct: 459 SNPVALKWGKEIHAEVVKA-GIFADLAVANALMSMYFKCGSVEDAI 503


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/636 (34%), Positives = 373/636 (58%), Gaps = 13/636 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +L  C+  E LE G+R HA + +  +  + +V  +L++MY KCG ++  + V 
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   ++ S   ++AG+A++   ++AF FF K+    ++PN  T+ ++L  C   SA+ 
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALK 424

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+H + +K  Y++   V  ALL+MY KCG + DA +VFE + ++NV++W A+I  + 
Sbjct: 425 QGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYV 484

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH  Y+  +     + ++GI P+  TFT  L  C S     +G    + +I+ G      
Sbjct: 485 QHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH 544

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  A+V M+   G++  A     +M +    VSWN  IAGF ++ + + A + F  M  +
Sbjct: 545 IRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQHGENQFAFDYFKMMQES 603

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ T++ +L AC+   +L    ++H+ I ++  + +V VG+ LI  Y KCGS +DA
Sbjct: 604 GVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDA 663

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  L   +V SW SMI  Y+Q+GR ++A+ LF +M  EG++P   TF+  LSAC+H+
Sbjct: 664 HLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHA 723

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+++G   FESM K++ I P   HY CMVDL GRAG L  A+ FI+ + +KP + +W  
Sbjct: 724 GLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGA 782

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC+ H D+++AE ++++ LELDP+D  VYV LSN+YA AG+  +  + RK+M  + +
Sbjct: 783 LLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGV 842

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K+PG SWIEV  +++ F S +K+H ++ +++ +L +L  +++ +G+            D
Sbjct: 843 VKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRYVLHDVED 902

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +EKE  + +HSERLA+ +GL+  P       S+ L 
Sbjct: 903 SEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLR 938



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 268/495 (54%), Gaps = 3/495 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           + +Q    +L  C + + L  G R H  I  + +  D F+   L++MYAKCG+  S   +
Sbjct: 102 IHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQI 161

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +MP  D+ S N LL GY ++  +++AF    ++    V+P+ YT+  ML  C     +
Sbjct: 162 FDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNV 221

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D+G +L +  +   + +   V  AL+ M+IKCG ++DA  VF  L +R++I+WT++I G 
Sbjct: 222 DKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGL 281

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +H  +++   L  +M E+G+ P++  F   L +C        G   HA++ + G+    
Sbjct: 282 ARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEI 341

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +VGTA++ MY+  G + E   ++  + K  + VSW A IAGF ++ + EEA   F++M+ 
Sbjct: 342 YVGTALLSMYTKCGSM-EDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIE 400

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    +  T+ SIL ACS   +L    QIH RI+K+ + ++  V ++L+  Y KCGS  D
Sbjct: 401 SGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMD 460

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  VF +++  +VV+WN+MI AY Q+ +   A+  F+ ++ EGI+P +STF ++L+ C  
Sbjct: 461 ARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKS 520

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              ++ G+ V +S++   G   +    + +V +    G L  A+   +++P +     W 
Sbjct: 521 PDALELGKWV-QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVS-WN 578

Query: 595 PLFAACRCHSDLKMA 609
            + A    H + + A
Sbjct: 579 TIIAGFVQHGENQFA 593



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 277/545 (50%), Gaps = 6/545 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + +L+ C+  + ++ G    +LI       D FV  +L+NM+ KCG +   + V 
Sbjct: 204 DKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVF 263

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  D+ +   ++ G A++  F QA + F  ++   VQP+   + ++L  C    A++
Sbjct: 264 NNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALE 323

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++HA+  ++   ++  V  ALL+MY KCG MEDA  VF  +  RNV+SWTA+I GF 
Sbjct: 324 QGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFA 383

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QHG  E+       M E GI+PN  TF   L +C+       G   H ++IK G    D 
Sbjct: 384 QHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++ MY+  G + +A+   + + K  + V+WNA I  + +++K + A+  F  +++ 
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQ-NVVAWNAMITAYVQHEKYDNAVATFQALLKE 502

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  T++SIL  C    +L   + + S I+++ FES++H+ ++L+  +  CG    A
Sbjct: 503 GIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSA 562

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F+ +   D+VSWN++I  + Q+G  + A   F+ M   G++P   TF  +L+AC+  
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASP 622

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             + +G+++  +++ E  +  +    + ++ +  + G ++ A +   NLP K     W  
Sbjct: 623 EALTEGRRL-HALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTS 680

Query: 596 LFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
           +      H   K A E   +   E    D   +V   +  A AGL    E       MK+
Sbjct: 681 MITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLI--KEGLHHFESMKD 738

Query: 655 ISKEP 659
            + EP
Sbjct: 739 FNIEP 743



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 215/398 (54%), Gaps = 5/398 (1%)

Query: 180 YLDIAS---CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++DI +    N  L   +K     +A    L +D   +Q +  TYS++L +C     + +
Sbjct: 63  FVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD 122

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+++H      +      + N L++MY KCG    A+ +F+ +  ++V SW  ++ G+ Q
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           H  YE+  RL   M +DG+ P++YTF   L +CA  +N   G    + ++  G     FV
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GTA+++M+   G + +A K    + +    ++W + I G  R+++ ++A   F  M    
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRR-DLITWTSMITGLARHRQFKQACNLFQVMEEEG 301

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D+  + S+LKAC+   +L   +++H+R+ +   ++ ++VG++L+  Y KCGS EDA 
Sbjct: 302 VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDAL 361

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF+ +   +VVSW +MI  ++Q+GR  +A + F KM+  GI P   TF+++L ACS   
Sbjct: 362 EVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPS 421

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            ++ G+++ + ++K  G + ++   + ++ +  + G L
Sbjct: 422 ALKQGRQIHDRIIKA-GYITDDRVRTALLSMYAKCGSL 458


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/618 (36%), Positives = 362/618 (58%), Gaps = 12/618 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L+LG+ +HA + K     D  +  +LV+MY K G +     V   +   D
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRD 227

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +++ N ++ GYAK+   ++AF  F ++     +PN  ++ ++L  C +  A+  GK +HA
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q M    +    V+ AL+ MY+ CG +E A  VF+ +  R+V+SWT +I G+ ++ + E 
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED 347

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L   M+E+GI P+  T+   + +CAS  +  +    H+QV++ G      V TA+V 
Sbjct: 348 AFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVH 407

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G I +A++    M +    VSW+A I  +  N   EEA E F  M RN+   D  
Sbjct: 408 MYAKCGAIKDARQVFDAMSRR-DVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY ++L AC  L +L    +I+++ +K+   S++ VG++LI    K GS E A  +F  +
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM 526

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVV+WN MI  YS +G AR+A+ LF++M+ E  RP + TF+ VLSACS +G V++G+
Sbjct: 527 VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGR 586

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  ++   GI+P    Y CMVDLLGRAG+L+ A + I+ +P+KP + IW  L AACR 
Sbjct: 587 RFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + +L +AE  +++ L  +P D AVYV LS+MYA AG+  +  + RK+M+ + + KE GC+
Sbjct: 647 YGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCT 706

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WIEV  K++ F  +++SH +  ++Y +L +LM  I+  G+            + EKE+ +
Sbjct: 707 WIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQEKEEAI 766

Query: 712 LYHSERLAVGFGLISLPA 729
            YHSE+LA+ +G++SLP+
Sbjct: 767 SYHSEKLAIAYGVLSLPS 784



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 269/536 (50%), Gaps = 7/536 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D +  +++   C       LG++    I ++    + +   +L+ +++ CG++      
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +    + + N ++AGYA+     +AF+ F ++    ++P+  T+  +L  C S + +
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK+ HAQ +K+ ++S   +  AL++MY+K G M+ A  VF+GL +R+V ++  +I G+
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + GD EK  +L   M+++G  PN  +F   L  C++      G   HAQ +  G+    
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V TA++ MY G G I  A++   +M K    VSW   I G+  N   E+A   F+ M  
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKM-KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D  TY  I+ AC+    L+   +IHS++V++ F +++ V ++L+  Y KCG+ +D
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF  ++  DVVSW++MI AY +NG   +A   F  M    + P   T++ +L+AC H
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            G +  G +++   +K   ++      + ++++  + G +E A     N+ ++     W 
Sbjct: 478 LGALDLGMEIYTQAIKA-DLVSHIPVGNALINMNVKHGSIERARYIFENM-VQRDVVTWN 535

Query: 595 PLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            +      H + + A +   + + E    ++  +V + +  + AG     EE R+ 
Sbjct: 536 VMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGF---VEEGRRF 588



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 187/378 (49%), Gaps = 3/378 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  CS  E L  G+  HA    T +  D  V  +L+ MY  CG I+    V  +M  
Sbjct: 267 LSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV 326

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S   ++ GYA+N+  + AF  F  +    +QP+  TY  ++  C S + +   +++
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+Q ++  + +   V  AL+ MY KCG ++DA  VF+ + +R+V+SW+A+I  + ++G  
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCG 446

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+      LM+ + ++P+  T+   L +C  L    +G   + Q IK  +     VG A+
Sbjct: 447 EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNAL 506

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           ++M    G I  A+   + M +    V+WN  I G+  +    EA++ F +M++     +
Sbjct: 507 INMNVKHGSIERARYIFENMVQR-DVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPN 565

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVF 479
             T+  +L ACS    +    +  S ++  +     + +   +++   + G  ++AE + 
Sbjct: 566 SVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLI 625

Query: 480 SQLTAADVVS-WNSMIKA 496
           +++      S W++++ A
Sbjct: 626 NRMPLKPNSSIWSTLLAA 643



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 39/365 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   I +++ C+    L L R  H+ + +     D  V  +LV+MYAKCG IK    V 
Sbjct: 363 DRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVF 422

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S + ++  Y +N   ++AF  F  +   +V+P+  TY  +L  CG L A+D
Sbjct: 423 DAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALD 482

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G +++ Q +K   +S   V NAL+ M +K G +E A  +FE +VQR+V++W  +I G+ 
Sbjct: 483 LGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYS 542

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGD 354
            HG+  + L L   M ++   PN  TF   L++C+       G  F + ++  RG+    
Sbjct: 543 LHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTM 602

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +   +VD+    GE+ EA+  +  M    +S  W                         
Sbjct: 603 ELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIW------------------------- 637

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWE 473
                     S++L AC +  +L   E+   R + S+ ++  V+V   L   Y   G WE
Sbjct: 638 ----------STLLAACRIYGNLDVAERAAERCLMSEPYDGAVYV--QLSHMYAAAGMWE 685

Query: 474 DAERV 478
           +  +V
Sbjct: 686 NVAKV 690


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/621 (36%), Positives = 374/621 (60%), Gaps = 13/621 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I VL+  S    L+ G+  H+ I       D  V  +LV MYAKCG  K    V +++  
Sbjct: 349 INVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVN 408

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ + N ++ G A+   +++A   + ++    + PN  TY  +L  C + +A+  G+++
Sbjct: 409 RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI 468

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H++ +K  ++   +V NAL++MY +CG ++DA  +F  +V++++ISWTA+I G  + G  
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLG 528

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L +   M++ G+ PN  T+T  L +C+S      G   H QVI+ G+A    V   +
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTL 588

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V+MYS  G + +A++    M +    V++NA I G+  +   +EA++ F ++       D
Sbjct: 589 VNMYSMCGSVKDARQVFDRMTQR-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPD 647

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + TY ++L AC+   SL   ++IHS ++K  + S+  +G++L+  Y KCGS+ DA  VF 
Sbjct: 648 KVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFD 707

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   +V+SWN++I   +Q+GR +  + LFE+M +EGI+P   TF+++LSACSH+GL+++
Sbjct: 708 KMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEE 767

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ F SM +++GI P   HY CMVDLLGRAG+L+     I  +P +    IW  L  AC
Sbjct: 768 GRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGAC 827

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H ++ +AE  ++  L+LDPD+AAVYV LS+MYA AG+   A + RKLM+ + ++KEPG
Sbjct: 828 RIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPG 887

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
            SWIEV +K++ F ++++SH E  K+Y +L +L   ++  G+            + EKE+
Sbjct: 888 RSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKEN 947

Query: 710 RVLYHSERLAVGFGLIS-LPA 729
            V +HSERLA+ +GLIS LP 
Sbjct: 948 AVCHHSERLAIAYGLISTLPG 968



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 274/535 (51%), Gaps = 7/535 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L +   + +LS C     LE GR  H    K  +  D  V   ++NMYAKCG I     V
Sbjct: 242 LGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M    + S   ++ GYA     + AF  F K+    V PN  TY  +L      +A+
Sbjct: 302 FDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK +H+  +   + S  AV  AL+ MY KCG  +D   VFE LV R++I+W  +I G 
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G++E+   +   M+ +G+ PN+ T+ + L +C +    H G   H++V+K G     
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  A++ MY+  G I +A+    +M +    +SW A I G  ++    EA+  F  M +
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRK-DIISWTAMIGGLAKSGLGAEALAVFQDMQQ 540

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +  TY+SIL ACS   +L    +IH +++++   ++ HV ++L+  Y+ CGS +D
Sbjct: 541 AGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKD 600

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF ++T  D+V++N+MI  Y+ +   ++A+ LF+++  EG++P   T++ +L+AC++
Sbjct: 601 ARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACAN 660

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           SG ++  +++  S+V + G L + +  + +V    + G    AL+    + +K     W 
Sbjct: 661 SGSLEWAKEI-HSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNVISWN 718

Query: 595 PLFAACRCHSDLK-MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
            +   C  H   + + +   +  +E    D   +V+L +  + AGL    EE R+
Sbjct: 719 AIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGL---LEEGRR 770



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 282/574 (49%), Gaps = 13/574 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C   + L  GR  H  I +     DQ+   +L+NMY +CG I+    V  ++ +
Sbjct: 145 MKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH 204

Query: 181 LD--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            +  + S N ++ GY +    ++A     ++    +     T   +L+ C S SA++ G+
Sbjct: 205 TERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGR 264

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H + MK + L    V+N +L MY KCG + +A  VF+ +  ++V+SWT II G+   G
Sbjct: 265 EIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCG 324

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             E    +   M+++G+ PN  T+   L + +       G   H+ ++  G      VGT
Sbjct: 325 HSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGT 384

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V MY+  G  ++  +Q+ E   +   ++WN  I G       EEA E + QM R    
Sbjct: 385 ALVKMYAKCGS-YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMM 443

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            ++ TY  +L AC    +L    +IHSR+VK  F  ++ V ++LI  Y +CGS +DA  +
Sbjct: 444 PNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLL 503

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F+++   D++SW +MI   +++G   +A+ +F+ M   G++P   T+ ++L+ACS    +
Sbjct: 504 FNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAAL 563

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             G+++ + ++ E G+  +    + +V++    G ++ A      +  +     +  +  
Sbjct: 564 DWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVA-YNAMIG 621

Query: 599 ACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
               H+  K A  +  ++ E  L PD    Y+ + N  A +G    A+E   L     + 
Sbjct: 622 GYAAHNLGKEALKLFDRLQEEGLKPDK-VTYINMLNACANSGSLEWAKEIHSL-----VL 675

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           K+   S   + N +   +++  S S+   V++K+
Sbjct: 676 KDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM 709



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 248/529 (46%), Gaps = 46/529 (8%)

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           D+A      L     + N   Y  ML  C  +  +  G+++H   ++   +      NAL
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182

Query: 260 LTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           + MYI+CG +E+A  V+  L   +R V SW A++ G+ Q+G  E+ L+L+  M++ G+  
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
              T    L+SC S      G   H + +K  +     V   I++MY+  G I EA++  
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M ++ S VSW   I G+     +E A E F +M +     +  TY ++L A S   +L
Sbjct: 303 DKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAAL 361

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              + +HS I+ +  ES++ VG++L++ Y KCGS++D  +VF +L   D+++WN+MI   
Sbjct: 362 KWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGL 421

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS-----------HSGLVQDG----- 541
           ++ G   +A  ++ +M  EG+ P   T++ +L+AC            HS +V+DG     
Sbjct: 422 AEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481

Query: 542 --QKVFESMVKEYGILPEEA------------HYSCMVDLLGRAGKLEIALIFISNLP-- 585
             Q    SM    G + +               ++ M+  L ++G    AL    ++   
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541

Query: 586 -IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADA 643
            +KP    +  +  AC   + L     I +Q++E     DA V  TL NMY+  G   DA
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDA 601

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
            +    M  ++I           YN +   ++ +    E  K++++L++
Sbjct: 602 RQVFDRMTQRDIV---------AYNAMIGGYAAHNLGKEALKLFDRLQE 641



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 4/214 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   I +L+ C+    LE  +  H+L+ K     D  +  +LV+ YAKCG     + V 
Sbjct: 647 DKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVF 706

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S N ++ G A++         F ++    ++P+  T+ ++L+ C     ++
Sbjct: 707 DKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLE 766

Query: 236 EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG++      +   ++ T      ++ +  + G +++ E++ + +  Q N   W A++  
Sbjct: 767 EGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGA 826

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            + HG+   P+          +DP+     VAL+
Sbjct: 827 CRIHGNV--PVAERAAESSLKLDPDNAAVYVALS 858


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/631 (35%), Positives = 362/631 (57%), Gaps = 12/631 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  CS    L  G+  HA +       D  +  +LV+MY K G +     V   +  
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHI 221

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+++ N ++ GYAK+  +++AF  F ++  + ++PN  ++ ++L  C +  A+  GK +
Sbjct: 222 RDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAV 281

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ M    +    V+ +L+ MY  CG +E A  VF+ +  R+V+SWT +I G+ ++G+ 
Sbjct: 282 HAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E    L   M+E+GI P+  T+   + +CA   N +     H+QV   G      V TA+
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTAL 401

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V MY+  G I +A++    M +    VSW+A I  +  N    EA E F  M R++   D
Sbjct: 402 VHMYAKCGAIKDARQVFDAMPRR-DVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPD 460

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             TY ++L AC  L +L    +I+++ +K+   S+V +G++LI    K GS E A  +F 
Sbjct: 461 GVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFD 520

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   DV++WN+MI  YS +G AR+A+ LF++M+ E  RP + TF+ VLSACS +G V +
Sbjct: 521 TMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDE 580

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ F  +++  GI+P    Y CMVDLLGRAG+L+ A + I ++P+KPT+ IW  L  AC
Sbjct: 581 GRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVAC 640

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H +L +AE  +++ L +DP D AVYV LS+MYA AG+  +  + RK+M+ + I KE G
Sbjct: 641 RIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQG 700

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
           C+WIEV  K++ F  +++SH  + ++Y +L +LM  I+  G+            + +KE+
Sbjct: 701 CTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQQKEE 760

Query: 710 RVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + YHSE+LA+ +G++SLP+       + L 
Sbjct: 761 AISYHSEKLAIAYGVLSLPSGTPIRIYKNLR 791



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 257/504 (50%), Gaps = 3/504 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D +  +++   C+      LG++    I +     + +   +L+ +Y+ CG++     +
Sbjct: 55  IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +    + + N L+AGYA+     +AF+ F ++    ++P+  T+ ++L  C S + +
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + GK++HAQ +   ++S   +  AL++MY+K G M+DA  VF+GL  R+V ++  ++ G+
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + GD+EK   L   M++ G+ PN+ +F   L  C +      G   HAQ +  G+    
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V T+++ MY+  G I  A++    M K    VSW   I G+  N   E+A   F+ M  
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNM-KVRDVVSWTVMIEGYAENGNIEDAFGLFATMQE 353

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D  TY  I+ AC++  +L    +IHS++  + F +++ V ++L+  Y KCG+ +D
Sbjct: 354 EGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKD 413

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF  +   DVVSW++MI AY +NG   +A   F  M    I P   T++ +L+AC H
Sbjct: 414 ARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGH 473

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            G +  G +++   +K   ++      + ++ +  + G +E A  +I +  ++     W 
Sbjct: 474 LGALDVGMEIYTQAIKA-DLVSHVPLGNALIIMNAKHGSVERAR-YIFDTMVRRDVITWN 531

Query: 595 PLFAACRCHSDLKMAEFISKQILE 618
            +      H + + A ++  ++L+
Sbjct: 532 AMIGGYSLHGNAREALYLFDRMLK 555



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 39/365 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +++ C+    L   R  H+ +       D  V+ +LV+MYAKCG IK    V 
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVF 418

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  D+ S + ++  Y +N    +AF  F  +   +++P+  TY  +L  CG L A+D
Sbjct: 419 DAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALD 478

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G +++ Q +K   +S   + NAL+ M  K G +E A  +F+ +V+R+VI+W A+I G+ 
Sbjct: 479 VGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYS 538

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGD 354
            HG+  + L L   M ++   PN  TF   L++C+       G  F   +++ RG+    
Sbjct: 539 LHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTV 598

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +   +VD+    GE+ EA+  +K M    +S  W                         
Sbjct: 599 KLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIW------------------------- 633

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSR-IVKSKFESNVHVGSSLIEAYNKCGSWE 473
                     SS+L AC +  +L   E+   R ++   ++  V+V   L   Y   G WE
Sbjct: 634 ----------SSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYV--QLSHMYAAAGMWE 681

Query: 474 DAERV 478
           +  +V
Sbjct: 682 NVAKV 686



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 175/379 (46%), Gaps = 37/379 (9%)

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           E G   +  T+      C  LR++ +G      +I+ G  L  +    ++ +YS  G + 
Sbjct: 50  EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           EA +Q+ +  ++ + V+WNA IAG+ +    +EA   F QMV         T+ S+L AC
Sbjct: 110 EA-RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDAC 168

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S    L   +++H+++V + F S+  +G++L+  Y K GS +DA +VF  L   DV ++N
Sbjct: 169 SSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFN 228

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA----------------CSHS 535
            M+  Y+++G   KA  LF +M   G++P   +FL++L                  C ++
Sbjct: 229 VMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA 288

Query: 536 GLVQDGQKVFESMVKEYGI---------------LPEEAHYSCMVDLLGRAGKLEIALIF 580
           GLV D  +V  S+++ Y                 + +   ++ M++     G +E A   
Sbjct: 289 GLVDD-IRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGL 347

Query: 581 ISNLP---IKPTAPIWRPLFAACRCHSDLKMAEFISKQI-LELDPDDAAVYVTLSNMYAE 636
            + +    I+P    +  +  AC   ++L  A  I  Q+ +     D  V   L +MYA+
Sbjct: 348 FATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAK 407

Query: 637 AGLQADAEEQRKLMKMKEI 655
            G   DA +    M  +++
Sbjct: 408 CGAIKDARQVFDAMPRRDV 426


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/619 (36%), Positives = 364/619 (58%), Gaps = 12/619 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +LS C+    L  G + H+ + K  +  D  V  +L+++Y  C DIK+   +     
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +L  + K     ++F  F ++    + PN +TY ++L  C S+ A+D G+Q
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H Q +K  +     V + L+ MY K G ++ A  +   L + +V+SWTA+I+G+ QH  
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           + + L+    M   GI  +   F+ A+++CA ++  + G   HAQ    G +    +G A
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +V +Y+  G I EA  + +++  +  S+SWN  I+GF ++   E+A++ F+QM R     
Sbjct: 557 LVSLYARCGRIKEAYLEFEKI-DAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
             FT+ S + A + + ++   +QIH+ I+K  F+S++ V ++LI  Y KCGS EDA R F
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREF 675

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   + VSWN+MI  YSQ+G   +A+ LFEKM   G  P + TF+ VLSACSH GLV 
Sbjct: 676 CEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVT 735

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G   FESM KE+G++P+ AHY+C+VDL+ RAG L  A  FI  +PI+P A IWR L +A
Sbjct: 736 KGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSA 795

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C  H ++++ EF ++ +LEL+P+D+A YV LSNMYA +G     ++ R++M+ + + KEP
Sbjct: 796 CTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEP 855

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKED 709
           G SWIEV N ++ F+  ++ H    K+YE L +L ++  +IG+           + E++D
Sbjct: 856 GRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLLNDVEQEQKD 915

Query: 710 RVLY-HSERLAVGFGLISL 727
             +Y HSE+LA+ FGL+SL
Sbjct: 916 PTVYIHSEKLAITFGLLSL 934



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 239/468 (51%), Gaps = 3/468 (0%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           Q  I +L  C     L   ++ H  I K     +  +   LV++Y   GD+  +V V + 
Sbjct: 11  QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFED 70

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDE 236
           MP   + S + +++G+ +  + ++    F  +   +V P   +++++L  C G    I  
Sbjct: 71  MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
            +Q+HA+ +    L    +SN L+ +Y K G++  A  VF+ L  ++ +SW A+I+GF Q
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G  E+ + L C M   GI P  Y F+  L+ C  ++   +G   HA V K G +L  +V
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             A+V +YS +     A+K   +M +S   VS+N+ I+G  +   ++ A+E F++M R+ 
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKM-QSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D  T +S+L AC+   +L   EQ+HS ++K+   S++ V  +L++ Y  C   + A 
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F      +VV WN M+ A+ +     ++  +F +M ++G+ P   T+ ++L  C+  G
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVG 429

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
            +  G+++   ++K  G        S ++D+  + GKL+ A + +  L
Sbjct: 430 ALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 240/465 (51%), Gaps = 2/465 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ +  ++G + HAL+ K     + +V  +LV +Y++  +  S   V  +M   D
Sbjct: 219 VLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKD 278

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N L++G A+    D A   F K+    ++P+  T +++L+ C S  A+ +G+QLH+
Sbjct: 279 EVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHS 338

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   V  ALL +Y+ C  ++ A  +F      NV+ W  ++  F +  +  +
Sbjct: 339 YVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSE 398

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             R+   M+  G+ PN++T+   L +C S+    +G   H QVIK G     +V + ++D
Sbjct: 399 SFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLID 458

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++  A   L+ + +    VSW A I+G+ ++    EA++ F +M+      D  
Sbjct: 459 MYAKHGKLDTAHVILRTLTED-DVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNI 517

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            +SS + AC+ + +L    QIH++   S +  ++ +G++L+  Y +CG  ++A   F ++
Sbjct: 518 GFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKI 577

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D +SWN +I  ++Q+G    A+ +F +M    +  +  TF + +SA ++   ++ G+
Sbjct: 578 DAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGK 637

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           ++  +M+ + G   +    + ++    + G +E A      +P K
Sbjct: 638 QI-HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEK 681



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 167/616 (27%), Positives = 294/616 (47%), Gaps = 34/616 (5%)

Query: 89  DSFPDGFIDDGCSNTVP--VTCYSLESLLDKQFVI-EVLSYCSREECLELGRRY----HA 141
           D    GF++   SN V    +C   E++   +     VL  CS      +G RY    HA
Sbjct: 80  DKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHR---IGIRYAEQIHA 136

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
            I    +     ++  L+ +YAK G I S   V   +   D  S   +++G+++N   ++
Sbjct: 137 RIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEE 196

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A   F ++    + P  Y +S++L+ C  +   D G+QLHA   K     +T V NAL+T
Sbjct: 197 AIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVT 256

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           +Y +      AE VF  +  ++ +S+ ++I+G  Q G  +  L L   M+ D + P+  T
Sbjct: 257 LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L++CAS      G   H+ VIK G++    V  A++D+Y    +I  A +      
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL-TA 375

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           ++ + V WN  +  F +     E+   F QM       ++FTY SIL+ C+ + +L   E
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           QIH++++K+ F+ NV+V S LI+ Y K G  + A  +   LT  DVVSW ++I  Y+Q+ 
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHN 495

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF-ESMVKEYGILPEEAH 560
              +A+  F++M+  GI+  N  F + +SAC+    +  G+++  +S V  Y    + + 
Sbjct: 496 LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYS--EDLSI 553

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA----ACRCHSDLKMAEFISKQI 616
            + +V L  R G+++ A +    +  K +   W  L +    +  C   LK+   +++  
Sbjct: 554 GNALVSLYARCGRIKEAYLEFEKIDAKDSIS-WNGLISGFAQSGYCEDALKVFAQMNRAK 612

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           LE      A + T  +  + A   A+ ++ +++  M  I K    S IEV N +  F+++
Sbjct: 613 LE------ASFFTFGSAVSAAANIANIKQGKQIHAM--IIKRGFDSDIEVSNALITFYAK 664

Query: 677 -------NKSHSEMPK 685
                   +   EMP+
Sbjct: 665 CGSIEDARREFCEMPE 680



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 140/575 (24%), Positives = 262/575 (45%), Gaps = 65/575 (11%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N  TY  +L +C +  ++ E K+LH + +KL + +++ + N L+ +Y   G ++    VF
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR-NS 335
           E +  R+V SW  II+GF +     + L L   M E+ + P E +F   L +C+  R   
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                 HA++I  G+     +   ++ +Y+  G I  A+K    +  +  SVSW A I+G
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLC-TKDSVSWVAMISG 187

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           F +N   EEAI  F +M         + +SS+L  C+ +      EQ+H+ + K      
Sbjct: 188 FSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLE 247

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
            +V ++L+  Y++  ++  AE+VFS++ + D VS+NS+I   +Q G +  A+ LF KM  
Sbjct: 248 TYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKR 307

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---------EYGILP--------EE 558
           + ++P   T  ++LSAC+ +G +  G+++   ++K         E  +L         + 
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367

Query: 559 AH-------------YSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRC 602
           AH             ++ M+   G+   L  +      + IK   P    +  +   C  
Sbjct: 368 AHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTS 427

Query: 603 HSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              L + E I  Q+++     +  V   L +MYA+ G    A      + ++ ++++   
Sbjct: 428 VGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAH-----VILRTLTEDDVV 482

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------------- 705
           SW  + +     ++Q+   +E  K ++++     Q ++IG +                  
Sbjct: 483 SWTALISG----YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQI 538

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             +  V  +SE L++G  L+SL A+    C R  E
Sbjct: 539 HAQSYVSGYSEDLSIGNALVSLYAR----CGRIKE 569


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/619 (35%), Positives = 360/619 (58%), Gaps = 12/619 (1%)

Query: 121  IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
            + +LS C+       G+  H  I ++ +  +  +  +L+NMY +CG +     V +    
Sbjct: 435  LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494

Query: 181  LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             D+ S N ++AG+A++  ++ A+  F ++   +++P++ T++++L+ C +  A++ GKQ+
Sbjct: 495  RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554

Query: 241  HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
            H +  +        + NAL+ MYI+CG ++DA +VF  L  R+V+SWTA+I G    G+ 
Sbjct: 555  HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
             K + L   M+ +G  P + TF+  L  C S      G    A ++  G  L   VG A+
Sbjct: 615  MKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNAL 674

Query: 361  VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            +  YS  G + +A++   +M  S   VSWN  IAG+ +N   + A+E   QM   D   +
Sbjct: 675  ISAYSKSGSMTDAREVFDKM-PSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN 733

Query: 421  EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            +F++ S+L ACS   +L   +++H+ IVK K + +V VG++LI  Y KCGS  +A+ VF 
Sbjct: 734  KFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFD 793

Query: 481  QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
             +   +VV+WN+MI AY+Q+G A KA+  F  M  EGI+P  STF ++LSAC+H+GLV +
Sbjct: 794  NIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            G ++F SM  EYG+LP   HY C+V LLGRA + + A   I+ +P  P A +W  L  AC
Sbjct: 854  GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 913

Query: 601  RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
            R H ++ +AE  +   L+L+  + AVY+ LSN+YA AG   D  + R++M+ + I KEPG
Sbjct: 914  RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 973

Query: 661  CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKED 709
             SWIEV N I+ F + ++SH E  ++Y +LK+L  ++E+ G+  +            +E 
Sbjct: 974  RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQET 1033

Query: 710  RVLYHSERLAVGFGLISLP 728
             +  HSERLA+ +GLI  P
Sbjct: 1034 SLCTHSERLAIAYGLIKTP 1052



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/436 (31%), Positives = 241/436 (55%), Gaps = 1/436 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++   + +L+ CS  + LE G+  H+ I++     D  +  +L++MYA+CGD+     +
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP  D+ S N ++AGYA+     +A   + ++    V+P   T+  +L+ C + SA 
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            +GK +H   ++    S   ++NAL+ MY +CG + +A++VFEG   R+VISW ++I G 
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            QHG YE   +L   M+ + ++P+  TF   L+ C +     +G   H ++ + G+ L  
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +G A+++MY   G + +A+     + +    +SW A I G     +  +AIE F QM  
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                 + T+SSILK C+    L   +++ + I+ S +E +  VG++LI AY+K GS  D
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  VF ++ + D+VSWN +I  Y+QNG  + A+    +M  + + P   +F+++L+ACS 
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 535 SGLVQDGQKVFESMVK 550
              +++G++V   +VK
Sbjct: 747 FSALEEGKRVHAEIVK 762



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 269/565 (47%), Gaps = 37/565 (6%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   I +L   +    L+ G+R H L  +  +  D  V  +LV M  +CGD+ S     
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K     D+   N L+A  A++    +AF  + ++    V  N  TY ++L  C +  A++
Sbjct: 288 KGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H+   +  + S   + NAL++MY +CG +  A  +F  + +R++ISW AII G+ 
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +  D  + +RL   M+ +G+ P   TF   L++CA+      G M H  +++ G+     
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  A+++MY   G + EA+    E  ++   +SWN+ IAG  ++   E A + F +M   
Sbjct: 468 LANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE 526

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   D  T++S+L  C    +L   +QIH RI +S  + +V++G++LI  Y +CGS +DA
Sbjct: 527 ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  L   DV+SW +MI   +  G   KAI LF +M  EG RP  STF ++L  C+ S
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSS 646

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP---------- 585
             + +G+KV   ++   G   +    + ++    ++G +  A      +P          
Sbjct: 647 ACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKI 705

Query: 586 ------------------------IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD- 620
                                   + P    +  L  AC   S L+  + +  +I++   
Sbjct: 706 IAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKL 765

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEE 645
             D  V   L +MYA+ G Q +A+E
Sbjct: 766 QGDVRVGAALISMYAKCGSQGEAQE 790



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 264/549 (48%), Gaps = 20/549 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C+R+  L   +R HA + +  V  D F++  L+NMY KC  +     V K+MP 
Sbjct: 31  VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPR 90

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N L++ YA+     +AF  F ++      PN  TY ++L  C S + ++ GK++
Sbjct: 91  RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKI 150

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+Q +K  Y     V N+LL+MY KCG +  A  VF G+  R+V+S+  ++  + Q    
Sbjct: 151 HSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYV 210

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ L L   M  +GI P++ T+   L +  +      G   H   ++ G+     VGTA+
Sbjct: 211 KECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTAL 270

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V M    G++  AK+  K        V +NA IA   ++    EA E + +M  +  A +
Sbjct: 271 VTMCVRCGDVDSAKQAFKGTADR-DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALN 329

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             TY SIL ACS   +L   + IHS I +    S+V +G++LI  Y +CG    A  +F 
Sbjct: 330 RTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFY 389

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D++SWN++I  Y++     +A+ L+++M  EG++P   TFL +LSAC++S    D
Sbjct: 390 TMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYAD 449

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+ + E +++  GI       + ++++  R G L  A         +     W  + A  
Sbjct: 450 GKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-WNSMIAGH 507

Query: 601 RCHSDLKMAE--FISKQILELDPDDAAVYVTLS---------------NMYAEAGLQADA 643
             H   + A   F   Q  EL+PD+      LS                   E+GLQ D 
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567

Query: 644 EEQRKLMKM 652
                L+ M
Sbjct: 568 NLGNALINM 576



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 3/397 (0%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +L  C     + E K++HAQ ++        +SN L+ MY+KC  + DA  VF+ +
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +R+VISW ++I+ + Q G  +K  +L   M+  G  PN+ T+   L +C S      G 
Sbjct: 89  PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGK 148

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H+Q+IK G      V  +++ MY   G++  A++    +      VS+N  +  + + 
Sbjct: 149 KIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPR-DVVSYNTMLGLYAQK 207

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              +E +  F QM     + D+ TY ++L A +    L   ++IH   V+    S++ VG
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+    +CG  + A++ F      DVV +N++I A +Q+G   +A   + +M  +G+ 
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVA 327

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
              +T+L++L+ACS S  ++ G K+  S + E G   +    + ++ +  R G L  A  
Sbjct: 328 LNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
               +P K     W  + A      D   A  + KQ+
Sbjct: 387 LFYTMP-KRDLISWNAIIAGYARREDRGEAMRLYKQM 422


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/647 (35%), Positives = 355/647 (54%), Gaps = 15/647 (2%)

Query: 94  GFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           G++ +G  N      Y ++      DK   + V+  C  +  L+ GR+ H  I       
Sbjct: 94  GYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFES 153

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  V  +L +MY KCG +++   V  +MP  D+ S N ++AGY++N    +A + F ++ 
Sbjct: 154 DVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQ 213

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              ++PN  T  +++ +C  L A+++GKQ+H   ++    S   V N L+ MY KCG + 
Sbjct: 214 VNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVN 273

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +FE +  R+V SW AII G+  +  + + L     M+  GI PN  T    L +CA
Sbjct: 274 TAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACA 333

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L     G   H   I+ G    D VG A+V+MY+  G +  A K  + M K  + V+WN
Sbjct: 334 HLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK-NVVAWN 392

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+G+ ++    EA+  F +M       D F   S+L AC+   +L   +QIH   ++S
Sbjct: 393 AIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRS 452

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            FESNV VG+ L++ Y KCG+   A+++F ++   DVVSW +MI AY  +G    A+ LF
Sbjct: 453 GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALF 512

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            KM   G +  +  F A+L+ACSH+GLV  G + F+ M  +YG+ P+  HY+C+VDLLGR
Sbjct: 513 SKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGR 572

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG L+ A   I N+ ++P A +W  L  ACR H ++++ E  +K + ELDPD+A  YV L
Sbjct: 573 AGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLL 632

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+YAEA    D  + RK+MK K + K+PGCS + V+  +  F   +++H +  ++Y  L
Sbjct: 633 SNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAML 692

Query: 691 KQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLIS 726
           + L +Q+   G+  N            KE+ +  HSE+LA+ FG+I+
Sbjct: 693 EILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIIN 739



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 208/396 (52%), Gaps = 2/396 (0%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           + GY KN  +++A   + ++    + P+   + +++  CGS S +  G+++H   +   +
Sbjct: 92  IIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF 151

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            S   V  AL +MY KCG +E+A  VF+ + +R+V+SW AII G+ Q+G   + L L   
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M+ +GI PN  T    +  CA L     G   H   I+ G+     V   +V+MY+  G 
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A K  + M       SWNA I G+  N +  EA+  F++M       +  T  S+L 
Sbjct: 272 VNTAHKLFERM-PIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLP 330

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+ L +L   +QIH   ++S FESN  VG++L+  Y KCG+   A ++F ++   +VV+
Sbjct: 331 ACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA 390

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I  YSQ+G   +A+ LF +M  +GI+P +   ++VL AC+H   ++ G+++    +
Sbjct: 391 WNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +  G        + +VD+  + G +  A      +P
Sbjct: 451 RS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 177/353 (50%), Gaps = 5/353 (1%)

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           ++ N + W   I G+ ++G + K LRL   M+  GI+P++  F   + +C S  +   G 
Sbjct: 81  IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +I RG      VGTA+  MY+  G +  A++    M K    VSWNA IAG+ +N
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKR-DVVSWNAIIAGYSQN 199

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +  EA+  FS+M  N    +  T  S++  C+ L +L   +QIH   ++S  ES+V V 
Sbjct: 200 GQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVV 259

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + L+  Y KCG+   A ++F ++   DV SWN++I  YS N +  +A+  F +M V GI+
Sbjct: 260 NGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P + T ++VL AC+H   ++ GQ++    ++  G    +   + +V++  + G +  A  
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYK 378

Query: 580 FISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTL 630
               +P K     W  + +      H    +A FI  Q   + PD  A+   L
Sbjct: 379 LFERMP-KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 156/318 (49%), Gaps = 11/318 (3%)

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           + Q  +     ++V W   I G+ +N    +A+  + QM R     D+  + S++KAC  
Sbjct: 73  QTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGS 132

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
              L    ++H  I+   FES+V VG++L   Y KCGS E+A +VF ++   DVVSWN++
Sbjct: 133 QSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAI 192

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  YSQNG+  +A+ LF +M V GI+P +ST ++V+  C+H   ++ G+++    ++  G
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-G 251

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK--MAEF 611
           I  +    + +V++  + G +  A      +PI+  A  W  +      +S     +A F
Sbjct: 252 IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVAS-WNAIIGGYSLNSQHHEALAFF 310

Query: 612 ISKQILELDPDDAAVYVTL---SNMYA-EAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
              Q+  + P+   +   L   ++++A E G Q      R   +  ++    G + + +Y
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVV---GNALVNMY 367

Query: 668 NKIYRFFSQNKSHSEMPK 685
            K     S  K    MPK
Sbjct: 368 AKCGNVNSAYKLFERMPK 385


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/692 (34%), Positives = 388/692 (56%), Gaps = 34/692 (4%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A Q+F+K  +R  +S + LI          G+++ G+S R     +    D C     V
Sbjct: 266 AAEQIFSKMHRRDRISYNSLI---------SGLAQRGFSDRALQLFEKMQLD-CMKPDCV 315

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           T  SL            LS C+       G++ H+ + K  +  D  +  SL+++Y KC 
Sbjct: 316 TVASL------------LSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           DI++           ++   N +L  Y +     +++  FL++    + PN YTY ++L 
Sbjct: 364 DIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILR 423

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C SL A+D G+Q+H Q +K  +     V + L+ MY K G ++ A  + + L + +V+S
Sbjct: 424 TCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS 483

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WTA+I G+ QH  + + L+L   M   GI  +   F+ A+++CA ++  + G   HAQ  
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY 543

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
             G +    +G A+V +Y+  G   +A    +++  +  ++SWNA I+GF ++   EEA+
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKI-DAKDNISWNALISGFAQSGHCEEAL 602

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + FSQM +     + FT+ S + A +   ++   +QIH+ ++K+ ++S     + LI  Y
Sbjct: 603 QVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLY 662

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           +KCGS EDA+R F ++   +VVSWN+MI  YSQ+G   +A+ LFE+M   G+ P + TF+
Sbjct: 663 SKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 722

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
            VLSACSH GLV +G   F SM KE+G++P+  HY C+VDLLGRA  L  A  FI  +PI
Sbjct: 723 GVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPI 782

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           +P A IWR L +AC  H ++++ EF ++ +LEL+P+D+A YV LSNMYA +G     +  
Sbjct: 783 EPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRT 842

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---- 702
           R++MK + + KEPG SWIEV N I+ FF  ++ H    ++YE +  L ++  +IG+    
Sbjct: 843 RQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDR 902

Query: 703 ------TDNEKEDRVLY-HSERLAVGFGLISL 727
                  + E++D   Y HSE+LAV FGL+SL
Sbjct: 903 YNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSL 934



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 159/592 (26%), Positives = 287/592 (48%), Gaps = 29/592 (4%)

Query: 19  PYPVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEE-- 76
           P+ V EQ+  K  +H        P        L++K+     +  + L+F      +   
Sbjct: 127 PFQVTEQIHAKIIHHGFG---SSPLVCNPLIDLYSKNGH---VDLAKLVFERLFLKDSVS 180

Query: 77  -----KGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREE 131
                 G+S+NG   R D     F     S  +P T Y   S         VLS C++ E
Sbjct: 181 WVAMISGLSQNG---REDEAILLFCQMHKSAVIP-TPYVFSS---------VLSACTKIE 227

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
             +LG + H  I K  +  + FV  +LV +Y++ G++ +   +  +M   D  S N L++
Sbjct: 228 LFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLIS 287

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G A+    D+A   F K+    ++P+  T +++L+ C S+ A  +GKQLH+  +K+   S
Sbjct: 288 GLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSS 347

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              +  +LL +Y+KC  +E A   F      NV+ W  ++  + Q G+  +   +   M+
Sbjct: 348 DLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQ 407

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
            +G+ PN+YT+   L +C SL    +G   H QVIK G     +V + ++DMY+  GE+ 
Sbjct: 408 IEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELD 467

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+  L+ + +    VSW A IAG+ ++    EA++ F +M       D   +SS + AC
Sbjct: 468 TARGILQRL-REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC 526

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + + +L   +QIH++   S +  ++ +G++L+  Y +CG  +DA   F ++ A D +SWN
Sbjct: 527 AGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWN 586

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I  ++Q+G   +A+ +F +M   G+     TF + +SA +++  ++ G+++   M+K 
Sbjct: 587 ALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT 646

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            G   E    + ++ L  + G +E A      +P K     W  +      H
Sbjct: 647 -GYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVS-WNAMITGYSQH 696



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 246/486 (50%), Gaps = 6/486 (1%)

Query: 116 DKQFVIEVLSYCSREEC-LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           D+     VL  CS  +   ++  + HA I          V   L+++Y+K G +     V
Sbjct: 110 DESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLV 169

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +++   D  S   +++G ++N   D+A   F ++    V P  Y +S++L+ C  +   
Sbjct: 170 FERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELF 229

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+QLH   +K    S+T V NAL+T+Y + G +  AE +F  + +R+ IS+ ++I+G 
Sbjct: 230 KLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGL 289

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q G  ++ L+L   M+ D + P+  T    L++CAS+   + G   H+ VIK GM+   
Sbjct: 290 AQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDL 349

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +  +++D+Y    +I E   +     ++ + V WN  +  + +     E+   F QM  
Sbjct: 350 IIEGSLLDLYVKCFDI-ETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQI 408

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +++TY SIL+ C+ L +L   EQIH++++KS F+ NV+V S LI+ Y K G  + 
Sbjct: 409 EGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDT 468

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +  +L   DVVSW +MI  Y+Q+    +A+ LF++M  +GIR  N  F + +SAC+ 
Sbjct: 469 ARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAG 528

Query: 535 SGLVQDGQKVF-ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
              +  GQ++  +S +  Y    + +  + +V L  R G+ + A +    +  K     W
Sbjct: 529 IQALNQGQQIHAQSYISGYS--EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-W 585

Query: 594 RPLFAA 599
             L + 
Sbjct: 586 NALISG 591



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 237/468 (50%), Gaps = 4/468 (0%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA I K+   G+  + + L+++Y   G++ + + +   +P  +++  N +++G    
Sbjct: 30  KKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAV 255
            L  Q    F  +   +V P+  T++++L  C G  +     +Q+HA+ +   + S   V
Sbjct: 90  KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLV 149

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N L+ +Y K G ++ A+ VFE L  ++ +SW A+I+G  Q+G  ++ + L C M +  +
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P  Y F+  L++C  +    +G   H  ++K G++   FV  A+V +YS  G +  A++
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              +M +    +S+N+ I+G  +   ++ A++ F +M  +    D  T +S+L AC+ + 
Sbjct: 270 IFSKMHRR-DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +    +Q+HS ++K    S++ +  SL++ Y KC   E A   F      +VV WN M+ 
Sbjct: 329 AGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLV 388

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           AY Q G   ++  +F +M +EG+ P   T+ ++L  C+  G +  G+++   ++K  G  
Sbjct: 389 AYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQ 447

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
                 S ++D+  + G+L+ A   +  L  +     W  + A    H
Sbjct: 448 FNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAMIAGYTQH 494



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 137/576 (23%), Positives = 264/576 (45%), Gaps = 67/576 (11%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++ N  TY  +   C +  ++ + K+LHA+  K  +  +  + + L+ +Y+  G +++A 
Sbjct: 6   IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ +   NV  W  +I+G        + L L  LM  + + P+E TF   L +C+  +
Sbjct: 66  KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125

Query: 334 NS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +    HA++I  G      V   ++D+YS  G +  AK   + +     SVSW A 
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-DSVSWVAM 184

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +N + +EAI  F QM ++      + +SS+L AC+ +      EQ+H  IVK   
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
            S   V ++L+  Y++ G+   AE++FS++   D +S+NS+I   +Q G + +A+ LFEK
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---------------------- 550
           M ++ ++P   T  ++LSAC+  G    G+++   ++K                      
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 551 -----EYGILPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAA 599
                EY +  E  +   ++ M+   G+ G L  +      + I+   P    +  +   
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           C     L + E I  Q+++       VYV   L +MYA+ G   + +  R +  ++ + +
Sbjct: 425 CTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHG---ELDTARGI--LQRLRE 478

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------------ 705
           E   SW  +       ++Q+   +E  K++++++    + ++IG +              
Sbjct: 479 EDVVSWTAMIAG----YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534

Query: 706 ----EKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
                 +  +  +SE L++G  L+SL A+    C R
Sbjct: 535 GQQIHAQSYISGYSEDLSIGNALVSLYAR----CGR 566



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 159/325 (48%), Gaps = 6/325 (1%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M E GI  N  T+      C +  +       HA++ K G    D +G+ ++D+Y   GE
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A K   ++  S  S  WN  I+G    +   + +  FS M+  +   DE T++S+L+
Sbjct: 61  VDNAIKLFDDIPSSNVSF-WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 430 ACSLLPS-LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ACS   +     EQIH++I+   F S+  V + LI+ Y+K G  + A+ VF +L   D V
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SW +MI   SQNGR  +AI+LF +M    + PT   F +VLSAC+   L + G+++   +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDL 606
           VK +G+  E    + +V L  R G L  A    S +  +     +  L +  A R  SD 
Sbjct: 240 VK-WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS-YNSLISGLAQRGFSDR 297

Query: 607 KMAEFISKQILELDPDDAAVYVTLS 631
            +  F   Q+  + PD   V   LS
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLS 322


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/615 (36%), Positives = 347/615 (56%), Gaps = 13/615 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   HA + K     D  ++ + V MY K   +++     K M   ++AS N LL+G+  
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               DQ     ++L     +PN YT+ ++L  C S   ++EGK +H Q +K      + +
Sbjct: 169 TETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHL 228

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N+L+ +Y KCG    A  VF  + +R+V+SWTA+I GF   G Y   LR+   M  +G 
Sbjct: 229 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGF 287

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           +PN YTF   L SC+SL +  +G   HAQ++K  +   DFVGTA+VDMY+    + +A+ 
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + K     +W   +AG+ ++ + E+A++ F QM R     +EFT +S L  CS + 
Sbjct: 348 IFNRLIKR-DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 406

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L +  Q+HS  +K+    ++ V S+L++ Y KCG  EDAE VF  L + D VSWN++I 
Sbjct: 407 TLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIIC 466

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            YSQ+G+  KA+  FE M+ EG  P   TF+ VLSACSH GL+++G+K F S+ K YGI 
Sbjct: 467 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT 526

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+LGRAGK      FI  + +     IW  +  AC+ H +++  E  + +
Sbjct: 527 PTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMK 586

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           + EL+P+  + Y+ LSNM+A  G+  D    R LM  + + KEPGCSW+EV  +++ F S
Sbjct: 587 LFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLS 646

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            + SH ++ +++ KL+ L Q++  +G+T           D EK++ + YHSERLA+ F L
Sbjct: 647 HDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFAL 706

Query: 725 ISLPAKNKFECSRTL 739
           +S   +      + L
Sbjct: 707 LSTSTRKTIRIFKNL 721



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 233/461 (50%), Gaps = 4/461 (0%)

Query: 143 ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
           + K  +C D  + +SLVN+Y KC  ++    V+++MP  D+   N  L+         +A
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
              F  +    ++ N + ++++++   SL     G+ +HA   K  + S   +SNA +TM
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y+K   +E+    F+ ++  N+ S   +++GF      ++  R++  +  +G +PN YTF
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
              L +CAS  + + G   H QVIK G+     +  ++V++Y+  G    A K   E+ +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               VSW A I GF   +     +  F+QM+      + +T+ SIL++CS L  +   +Q
Sbjct: 255 R-DVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H++IVK+  + N  VG++L++ Y K    EDAE +F++L   D+ +W  ++  Y+Q+G+
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             KA+  F +M  EG++P   T  + LS CS    +  G+++  SM  + G   +    S
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVAS 431

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            +VD+  + G +E A +    L  + T   W  +      H
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQH 471



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 202/397 (50%), Gaps = 8/397 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I +L  C+ +  L  G+  H  + K+ +  D  +  SLVN+YAKCG       V  ++P 
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S   L+ G+     +      F ++      PN YT+ ++L  C SLS +D GKQ+
Sbjct: 255 RDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ +K        V  AL+ MY K   +EDAE++F  L++R++ +WT I+ G+ Q G  
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           EK ++    M+ +G+ PNE+T   +L+ C+ +     G   H+  IK G +   FV +A+
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASAL 433

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY+  G + +A+     +  S  +VSWN  I G+ ++ +  +A++AF  M+      D
Sbjct: 434 VDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           E T+  +L ACS +  +   ++  + + K       +   + +++   + G + + E   
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 480 SQLT-AADVVSWNSMIKAYSQNGR----ARKAIILFE 511
            ++   ++V+ W +++ A   +G      R A+ LFE
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFE 589



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 180/350 (51%), Gaps = 38/350 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC++F + P+R  +S + LI  G++  E  G   +G    N    +GF  +         
Sbjct: 245 ACKVFGEIPERDVVSWTALI-TGFV-AEGYG---SGLRIFNQMLAEGFNPN--------- 290

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+          I +L  CS    ++LG++ HA I K ++ G+ FV  +LV+MYAK   
Sbjct: 291 MYTF---------ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 341

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++    +  ++   D+ +   ++AGYA++   ++A   F+++    V+PN +T ++ L+ 
Sbjct: 342 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 401

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C  ++ +D G+QLH+  +K        V++AL+ MY KCG +EDAE VF+GLV R+ +SW
Sbjct: 402 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 461

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
             II G+ QHG   K L+    M ++G  P+E TF   L++C     SHMG +   +  K
Sbjct: 462 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSAC-----SHMGLIEEGK--K 514

Query: 348 RGMALGDFVGTA--------IVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
              +L    G          +VD+    G+  E +  ++EM  +++ + W
Sbjct: 515 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 564



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 146/336 (43%), Gaps = 38/336 (11%)

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           +VIK G+     + +++V++Y     +  A++ L+EM        WN +++        +
Sbjct: 14  RVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEM-PIQDVQQWNQKLSSANSPYPLQ 72

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA++ F  M       ++F ++S++ A + L      E IH+ + K  FES++ + ++ +
Sbjct: 73  EAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFV 132

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y K  S E+  + F  +   ++ S N+++  +       +   +  +++VEG  P   
Sbjct: 133 TMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMY 192

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+++L  C+  G + +G+ +   ++K  GI P+   ++ +V++  + G    A      
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKS-GINPDSHLWNSLVNVYAKCGSANYACKVFGE 251

Query: 584 LP---------------------------------IKPTAPIWRPLFAACRCHSDLKMAE 610
           +P                                   P    +  +  +C   SD+ + +
Sbjct: 252 IPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 311

Query: 611 FISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAE 644
            +  QI++  LD +D  V   L +MYA+     DAE
Sbjct: 312 QVHAQIVKNSLDGND-FVGTALVDMYAKNRFLEDAE 346



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 73/341 (21%), Positives = 132/341 (38%), Gaps = 56/341 (16%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           ++I  R++K+    + H+ SSL+  Y KC S + A +V  ++   DV  WN  + + +  
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
              ++A+ LF  M    IR     F +++SA +  G    G+ +   + K YG   +   
Sbjct: 69  YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCK-YGFESDILI 127

Query: 561 YSCMVDLLGRAGKLEIALIF-----ISNLP-----------------------------I 586
            +  V +  +   +E    F     I NL                               
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAE 644
           +P    +  +   C    DL   + I  Q+++  ++P D+ ++ +L N+YA+ G    A 
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINP-DSHLWNSLVNVYAKCG---SAN 243

Query: 645 EQRKLMKMKEISKEPGCSWI--------EVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
              K+    EI +    SW         E Y    R F+Q  +    P +Y  +  +++ 
Sbjct: 244 YACKV--FGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFIS-ILRS 300

Query: 697 IEDIGHTDNEKEDRVLYHSERLA----VGFGLISLPAKNKF 733
              +   D  K+         L     VG  L+ + AKN+F
Sbjct: 301 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 341


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 237/702 (33%), Positives = 388/702 (55%), Gaps = 34/702 (4%)

Query: 50   QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
            Q+FN   +R  +S + LI          G+S+ GYS +            C + +   C 
Sbjct: 327  QVFNAMLQRDEVSYNSLI---------SGLSQQGYSDKALEL----FKKMCLDCLKPDCV 373

Query: 110  SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
            ++ SLL         S CS    L +G+++H+   K  +  D  +  +L+++Y KC DIK
Sbjct: 374  TVASLL---------SACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIK 424

Query: 170  SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
            +           ++   N +L  Y      +++F  F ++    ++PN +TY ++L  C 
Sbjct: 425  TAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCS 484

Query: 230  SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            SL A+D G+Q+H Q +K  +     VS+ L+ MY K G ++ A  +F  L +++V+SWTA
Sbjct: 485  SLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTA 544

Query: 290  IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            +I G+ QH  + + L L   M++ GI  +   F  A+++CA ++  + G   HAQ    G
Sbjct: 545  MIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSG 604

Query: 350  MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
             +    VG A+V +Y+  G++ +A     ++  S  ++SWN+ I+GF ++   EEA+  F
Sbjct: 605  YSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISGFAQSGHCEEALSLF 663

Query: 410  SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            SQM +     + FT+   + A + + ++   +QIH+ I+K+  +S   V + LI  Y KC
Sbjct: 664  SQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKC 723

Query: 470  GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            G+ +DAER F ++   + +SWN+M+  YSQ+G   KA+ LFE M   G+ P + TF+ VL
Sbjct: 724  GNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVL 783

Query: 530  SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            SACSH GLV +G K F+SM + +G++P+  HY+C+VDLLGR+G L  A  F+  +PI+P 
Sbjct: 784  SACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPD 843

Query: 590  APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            A + R L +AC  H ++ + EF +  +LEL+P D+A YV LSNMYA  G     +  R++
Sbjct: 844  AMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQM 903

Query: 650  MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD----- 704
            MK + + KEPG SWIEV N ++ FF+ ++ H  + K+YE L+ L +   + G+       
Sbjct: 904  MKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSL 963

Query: 705  -NEKEDR-----VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             N+ E R      + HSE+LA+ FGL+SL +       + L 
Sbjct: 964  LNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLR 1005



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 241/455 (52%), Gaps = 2/455 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E  ++G + H L+ K     + +V  +LV +Y++ G+      V   M   D
Sbjct: 277 VLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRD 336

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N L++G ++    D+A   F K+    ++P+  T +++L+ C S+ A+  GKQ H+
Sbjct: 337 EVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHS 396

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   +  ALL +Y+KC  ++ A   F      NV+ W  ++  +    +  +
Sbjct: 397 YAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNE 456

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             ++   M+ +GI+PN++T+   L +C+SLR   +G   H QV+K G     +V + ++D
Sbjct: 457 SFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLID 516

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+ LG++  A K  + + K    VSW A IAG+ +++K  EA+  F +M       D  
Sbjct: 517 MYAKLGKLDHALKIFRRL-KEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNI 575

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            ++S + AC+ + +L   +QIH++   S +  ++ VG++L+  Y +CG   DA   F ++
Sbjct: 576 GFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI 635

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            + D +SWNS+I  ++Q+G   +A+ LF +M   G    + TF   +SA ++   V+ G+
Sbjct: 636 FSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGK 695

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++  +M+ + G   E    + ++ L  + G ++ A
Sbjct: 696 QI-HAMIIKTGHDSETEVSNVLITLYAKCGNIDDA 729



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 256/535 (47%), Gaps = 9/535 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           + Q  + +L  C        G + H  I K   C +  +   L+++Y   GD+   V V 
Sbjct: 67  NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA-I 234
            +MP   ++  N +L  +    +  +    F ++    V+P+  TY+ +L  CG      
Sbjct: 127 DEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPF 186

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              +++HA+T+   Y +   V N L+ +Y K G +  A+ VF+GL +R+ +SW A+++G 
Sbjct: 187 HCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGL 246

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q G  E+ + L C M   G+ P  Y F+  L++C  +    +G   H  V+K+G +L  
Sbjct: 247 SQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLET 306

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V  A+V +YS LG    A++    M +    VS+N+ I+G  +   +++A+E F +M  
Sbjct: 307 YVCNALVTLYSRLGNFIPAEQVFNAMLQR-DEVSYNSLISGLSQQGYSDKALELFKKMCL 365

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D  T +S+L ACS + +L   +Q HS  +K+   S++ +  +L++ Y KC   + 
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A   F      +VV WN M+ AY       ++  +F +M +EGI P   T+ ++L  CS 
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              V  G+++   ++K  G        S ++D+  + GKL+ AL     L  K     W 
Sbjct: 486 LRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVS-WT 543

Query: 595 PLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
            + A    H     A  + K++ +  +  D+      +S   A AG+QA  + Q+
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAIS---ACAGIQALNQGQQ 595



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 233/448 (52%), Gaps = 7/448 (1%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
            C+E   + HA           FV   L+++Y K G + S   V   +   D  S   +L
Sbjct: 187 HCVE---KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAML 243

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           +G +++   ++A   F ++    V P  Y +S++L+ C  +     G+QLH   +K  + 
Sbjct: 244 SGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFS 303

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
            +T V NAL+T+Y + G    AE VF  ++QR+ +S+ ++I+G  Q G  +K L L   M
Sbjct: 304 LETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKM 363

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             D + P+  T    L++C+S+    +G  FH+  IK GM+    +  A++D+Y    +I
Sbjct: 364 CLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDI 423

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
             A +      ++ + V WN  +  +       E+ + F+QM       ++FTY SIL+ 
Sbjct: 424 KTAHEFFLST-ETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRT 482

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           CS L ++   EQIH++++K+ F+ NV+V S LI+ Y K G  + A ++F +L   DVVSW
Sbjct: 483 CSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSW 542

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF-ESMV 549
            +MI  Y+Q+ +  +A+ LF++M  +GI   N  F + +SAC+    +  GQ++  ++ V
Sbjct: 543 TAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACV 602

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             Y    + +  + +V L  R GK+  A
Sbjct: 603 SGYS--DDLSVGNALVSLYARCGKVRDA 628



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 191/387 (49%), Gaps = 4/387 (1%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V+ N  TY  +L  C S     +G +LH + +K+ + ++  +   L+ +YI  G ++ A 
Sbjct: 64  VRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAV 123

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +VF+ +  R +  W  +++ F       + L L   M ++ + P+E T+   L  C    
Sbjct: 124 TVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGD 183

Query: 334 NS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
              H     HA+ I  G     FV   ++D+Y   G +  AKK    + K   SVSW A 
Sbjct: 184 VPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR-DSVSWVAM 242

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           ++G  ++   EEA+  F QM  +      + +SS+L AC+ +      EQ+H  ++K  F
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGF 302

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
               +V ++L+  Y++ G++  AE+VF+ +   D VS+NS+I   SQ G + KA+ LF+K
Sbjct: 303 SLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKK 362

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M ++ ++P   T  ++LSACS  G +  G++ F S   + G+  +      ++DL  +  
Sbjct: 363 MCLDCLKPDCVTVASLLSACSSVGALLVGKQ-FHSYAIKAGMSSDIILEGALLDLYVKCS 421

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAA 599
            ++ A  F  +   +    +W  +  A
Sbjct: 422 DIKTAHEFFLSTETENVV-LWNVMLVA 447



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 3/267 (1%)

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           LM E G+  N  T+   L  C S      G+  H +++K G      +   ++D+Y   G
Sbjct: 58  LMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFG 117

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A     EM     S  WN  +  F   +     +  F +M++     DE TY+ +L
Sbjct: 118 DLDGAVTVFDEMPVRPLSC-WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176

Query: 429 KACSLLPSLATC-EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + C        C E+IH+R +   +E+++ V + LI+ Y K G    A++VF  L   D 
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDS 236

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSW +M+   SQ+G   +A++LF +M   G+ PT   F +VLSAC+     + G+++   
Sbjct: 237 VSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQL-HG 295

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKL 574
           +V + G   E    + +V L  R G  
Sbjct: 296 LVLKQGFSLETYVCNALVTLYSRLGNF 322


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 221/629 (35%), Positives = 354/629 (56%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L  G+  H+L  +     D+F++  LV+MY+KCG     + V  ++   D
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + ++    +     +A   F ++    V PN +T +++++    L  +  G+ +HA
Sbjct: 396 VVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHA 455

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  +     V NAL+TMY+K G ++D   VFE    R++ISW A+++GF  +   + 
Sbjct: 456 CVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDT 515

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            LR+   M  +G +PN YTF   L SC+SL +  +G   HAQ++K  +   DFVGTA+VD
Sbjct: 516 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 575

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    + +A+     + K     +W   +AG+ ++ + E+A++ F QM R     +EF
Sbjct: 576 MYAKNRFLEDAETIFNRLIKR-DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEF 634

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S L  CS + +L +  Q+HS  +K+    ++ V S+L++ Y KCG  EDAE VF  L
Sbjct: 635 TLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL 694

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            + D VSWN++I  YSQ+G+  KA+  FE M+ EG  P   TF+ VLSACSH GL+++G+
Sbjct: 695 VSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGK 754

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F S+ K YGI P   HY+CMVD+LGRAGK      FI  + +     IW  +  AC+ 
Sbjct: 755 KHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKM 814

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H +++  E  + ++ EL+P+  + Y+ LSNM+A  G+  D    R LM  + + KEPGCS
Sbjct: 815 HGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCS 874

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           W+EV  +++ F S + SH ++ +++ KL+ L Q++  +G+T           D EK++ +
Sbjct: 875 WVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELL 934

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            YHSERLA+ F L+S   +      + L 
Sbjct: 935 FYHSERLALAFALLSTSTRKTIRIFKNLR 963



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 225/428 (52%), Gaps = 1/428 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+ +  L  G+  H  + K+ +  D  +  SLVN+YAKCG       V  ++P  D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+ G+        A + F ++    V+ N +TY+T L  C     ++ GKQ+HA
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +K+   S   V +AL+ +Y KCG M  AE VF  + ++N +SW A++NGF Q GD EK
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L C M    I+ +++T +  L  CA+  N   G + H+  I+ G  L +F+   +VD
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G   +A K    + +    VSW+A I    +  ++ EA E F +M  +    ++F
Sbjct: 374 MYSKCGLAGDALKVFVRI-EDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQF 432

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S++ A + L  L   E IH+ + K  FE +  V ++L+  Y K GS +D  RVF   
Sbjct: 433 TLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT 492

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           T  D++SWN+++  +  N      + +F +M+ EG  P   TF+++L +CS    V  G+
Sbjct: 493 TNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGK 552

Query: 543 KVFESMVK 550
           +V   +VK
Sbjct: 553 QVHAQIVK 560



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 226/465 (48%), Gaps = 49/465 (10%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS ML  C S   ++EGK +H Q +K      + + N+L+ +Y KCG    A  VF  + 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +R+V+SWTA+I GF   G     + L C MR +G++ NE+T+  AL +C+   +   G  
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA+ IK G     FVG+A+VD+Y+  GE+  A++    M K  ++VSWNA + GF +  
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQ-NAVSWNALLNGFAQMG 309

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             E+ +  F +M  ++    +FT S++LK C+   +L   + +HS  ++   E +  +  
Sbjct: 310 DAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC 369

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            L++ Y+KCG   DA +VF ++   DVVSW+++I    Q G++R+A  +F++M   G+ P
Sbjct: 370 CLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 521 TNSTFLAVLSA-----------------CSHS------------------GLVQDGQKVF 545
              T  +++SA                 C +                   G VQDG +VF
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVF 489

Query: 546 ESMVKE----YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           E+        +  L    H +   D   R     +A  F       P    +  +  +C 
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGF------NPNMYTFISILRSCS 543

Query: 602 CHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAE 644
             SD+ + + +  QI++  LD +D  V   L +MYA+     DAE
Sbjct: 544 SLSDVDLGKQVHAQIVKNSLDGND-FVGTALVDMYAKNRFLEDAE 587



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 152/277 (54%), Gaps = 15/277 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I +L  CS    ++LG++ HA I K ++ G+ FV  +LV+MYAK   ++    +  ++  
Sbjct: 536 ISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK 595

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ +   ++AGYA++   ++A   F+++    V+PN +T ++ L+ C  ++ +D G+QL
Sbjct: 596 RDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  +K        V++AL+ MY KCG +EDAE VF+GLV R+ +SW  II G+ QHG  
Sbjct: 656 HSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQG 715

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA- 359
            K L+    M ++G  P+E TF   L++C     SHMG +   +  K   +L    G   
Sbjct: 716 GKALKAFEAMLDEGTVPDEVTFIGVLSAC-----SHMGLIEEGK--KHFNSLSKIYGITP 768

Query: 360 -------IVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                  +VD+    G+  E +  ++EM  +++ + W
Sbjct: 769 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 805


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/576 (35%), Positives = 351/576 (60%), Gaps = 1/576 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    L LG+  H+   K+A   D  V  + ++MYAKCG +     V+  MP   + S 
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSY 351

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ GYA++    QA   F  L    +  +  T S  L  C S+    EG+Q+H   +K
Sbjct: 352 NAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVK 411

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
              +S   V+NA+L MY KC  + +A  +F+ + +R+ +SW AII   +Q+G+ E+ L  
Sbjct: 412 SISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAH 471

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M    ++P+++T+   L +CA  +  + G   H ++IK GM    FVG A+VDMY  
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCK 531

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G I +A K + +  +  + VSWNA I+GF   Q++E+A + FS+M+      D FTY++
Sbjct: 532 CGMIEKADK-IHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAA 590

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+ L ++   +QIH++I+K + +S+V++ S+L++ Y+KCG+ +D++ +F +    D
Sbjct: 591 VLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRD 650

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+WN+M+  Y+ +G   +A+ LFE M +  ++P ++TF++VL AC+H GLV  G   F+
Sbjct: 651 FVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFD 710

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M+ EYG+ P+  HYSCMVD+LGR+G+++ AL  +  +P +  A IWR L + C+ H ++
Sbjct: 711 VMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNV 770

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  ++ +L+LDP D++  V LSN+YA+AG+  +  E RK+M+  ++ KEPGCSWIE+
Sbjct: 771 EVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIEL 830

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F   +K H    ++YEKL  L+ +++ +G+
Sbjct: 831 KDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGY 866



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 173/608 (28%), Positives = 304/608 (50%), Gaps = 25/608 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGY---STRN----DSFPDGFIDDG- 99
           AC++F+K   R  +S + +I +GY +  E  I+R  +     R+    +S   GF+ +G 
Sbjct: 103 ACKVFDKMYLRDVVSYNSII-SGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGE 161

Query: 100 CSNTVPVTCYSLE-----SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           C  ++ V    LE        D+  +  VL  C   E  ++G + H L+ K     D   
Sbjct: 162 CRKSIDVF---LEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVT 218

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
            ++L+ MYAKC  +   ++V  ++P  +  S + ++AG  +N    +    F ++ G+ V
Sbjct: 219 GSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV 278

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
             +   Y+++   C +LSA+  GK+LH+  +K  + S   V  A L MY KCG M DA+ 
Sbjct: 279 GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQK 338

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           V   + + ++ S+ AII G+ +     + L+   L+ + G+  +E T + AL +CAS+R 
Sbjct: 339 VLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRG 398

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   H   +K        V  AI+DMY     + EA   L +M +   +VSWNA IA
Sbjct: 399 DLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEA-SDLFDMMERRDAVSWNAIIA 457

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
              +N   EE +  F+ M+ +    D+FTY S+LKAC+   +L T  +IH+RI+KS    
Sbjct: 458 ACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGF 517

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +  VG++L++ Y KCG  E A+++  +     +VSWN++I  +S   ++  A   F +M+
Sbjct: 518 DSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRML 577

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGK 573
             G+ P N T+ AVL  C++   V  G+++   ++K+   L  + +  S +VD+  + G 
Sbjct: 578 EMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQE--LQSDVYICSTLVDMYSKCGN 635

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDAAVYVTLS 631
           ++ + +     P +     W  +      H   +  +  F S Q++ + P+  A +V++ 
Sbjct: 636 MQDSQLMFEKAPNRDFVT-WNAMLCGYAHHGLGEEALKLFESMQLVNVKPNH-ATFVSVL 693

Query: 632 NMYAEAGL 639
              A  GL
Sbjct: 694 RACAHMGL 701



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/552 (27%), Positives = 260/552 (47%), Gaps = 46/552 (8%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS++  L  G++ HA +         FV+  L+ MY KC  +     V  +M   D+ S 
Sbjct: 59  CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSY 118

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQP------------------------------ 216
           N +++GYA     D A  FF ++   DV                                
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178

Query: 217 -NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +  + + +L  CG+L   D G Q+H   +K  +       +ALL MY KC  ++D+ SV
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  L ++N +SW+A+I G  Q+    + L L   M+  G+  ++  +     SCA+L   
Sbjct: 239 FSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSAL 298

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   H+  +K        VGTA +DMY+  G + +A+K L  M K  S  S+NA I G
Sbjct: 299 RLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPK-CSLQSYNAIIVG 357

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + R+ +  +A+++F  +++     DE T S  L AC+ +       Q+H   VKS   SN
Sbjct: 358 YARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSN 417

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + V +++++ Y KC +  +A  +F  +   D VSWN++I A  QNG   + +  F  M+ 
Sbjct: 418 ICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIH 477

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T+ +VL AC+    +  G ++   ++K  G+  +    + +VD+  + G +E
Sbjct: 478 SRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKS-GMGFDSFVGAALVDMYCKCGMIE 536

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE----FISKQI-LELDPDD---AAVY 627
            A   I +   + T   W  + +     S L+ +E    F S+ + + ++PD+   AAV 
Sbjct: 537 KA-DKIHDRTEQKTMVSWNAIISG---FSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVL 592

Query: 628 VTLSNMYAEAGL 639
            T +N+ A  GL
Sbjct: 593 DTCANL-ATVGL 603



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 221/456 (48%), Gaps = 41/456 (8%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK-------------- 265
           T+S +   C   ++++ GKQ HA+ +   +   T VSN L+ MYIK              
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 266 -----------------CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
                            CG M+ A   F  + +R+V+SW ++I+GF Q+G+  K + +  
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G+  +  +  V L +C +L    MG   H  V+K G       G+A++ MY+   
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + ++     E+ +  + VSW+A IAG  +N +  E +E F +M        +  Y+S+ 
Sbjct: 231 RLDDSLSVFSELPEK-NWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++C+ L +L   +++HS  +KS F S++ VG++ ++ Y KCG   DA++V S +    + 
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           S+N++I  Y+++ R  +A+  F+ ++  G+     T    L+AC+      +G++V    
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLA 409

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKL-EIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           VK    +      + ++D+ G+   L E + +F  ++  +  A  W  + AAC  + + +
Sbjct: 410 VKSIS-MSNICVANAILDMYGKCKALAEASDLF--DMMERRDAVSWNAIIAACEQNGNEE 466

Query: 608 --MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +A F S     ++PDD   +   S + A AG QA
Sbjct: 467 ETLAHFASMIHSRMEPDD---FTYGSVLKACAGRQA 499



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 142/273 (52%), Gaps = 11/273 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+  + L  G   H  I K+ +  D FV A+LV+MY KCG I+    +  +     
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKT 549

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++G++     + A  FF ++  + V P+++TY+ +L  C +L+ +  GKQ+HA
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA 609

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q +K +  S   + + L+ MY KCG M+D++ +FE    R+ ++W A++ G+  HG  E+
Sbjct: 610 QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEE 669

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFV 356
            L+L   M+   + PN  TF   L +CA     HMG      + F   + + G+      
Sbjct: 670 ALKLFESMQLVNVKPNHATFVSVLRACA-----HMGLVDKGLHYFDVMLSEYGLDPQSEH 724

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            + +VD+    G I EA   +++M   A +V W
Sbjct: 725 YSCMVDILGRSGRIDEALNLVQKMPFEADAVIW 757


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 361/617 (58%), Gaps = 12/617 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C+    L+ G + H+ + K  +  D  +  SL+++Y KCGD+++ + +       +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L  + +     ++F  F ++    ++PN +TY  +L  C     ID G+Q+H+
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  + S   VS  L+ MY K G +E A  V E L +++V+SWT++I G+ QH   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M++ GI P+      A++ CA +     G   HA++   G +    +  A+V+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G I EA    +E+ +    ++WN  ++GF ++   EEA++ F +M ++    + F
Sbjct: 490 LYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S L A + L  +   +QIH+R++K+       VG++LI  Y KCGS+EDA+  FS++
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  + VSWN++I + SQ+GR  +A+ LF++M  EGI+P + TF+ VL+ACSH GLV++G 
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  EYGI P   HY+C++D+ GRAG+L+ A  FI  +PI   A +WR L +AC+ 
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ EF +K +LEL+P D+A YV LSN YA     A+ ++ RK+M+ + + KEPG S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---V 711
           WIEV N ++ FF  ++ H    ++Y  L  +  ++  +G+         D E+E R    
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTD 848

Query: 712 LYHSERLAVGFGLISLP 728
           L HSE+LAV FGL+SLP
Sbjct: 849 LVHSEKLAVTFGLMSLP 865



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 244/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E    GR  HA   K   C + FV  +++ +Y +CG  +    V   MP+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    + A   F ++    + P+  T S++LA C SL  + +G QLH+
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K    S   +  +LL +Y+KCG +E A  +F    + NV+ W  ++  F Q  D  K
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L C M+  GI PN++T+   L +C   R   +G   H+  +K G     +V   ++D
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A++ L EM K    VSW + IAG+ +++  ++A+ AF +M +     D  
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S +  C+ + ++    QIH+RI  S +  +V + ++L+  Y +CG   +A   F ++
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++WN ++  ++Q+G   +A+ +F +M   G++    TF++ LSA ++   ++ G+
Sbjct: 508 EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   ++K       E   + ++ L G+ G  E A +  S +  +     W  +  +C  
Sbjct: 568 QIHARVIKTGHSFETEVG-NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQ 625

Query: 603 HS 604
           H 
Sbjct: 626 HG 627



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 264/574 (45%), Gaps = 18/574 (3%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+   C   GRR+      HA      +   + V   L+++Y+K G +     V +++  
Sbjct: 46  CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+N L ++A   + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+  V NA++T+Y++CG    AE VF  +  R+ +++  +I+G  Q G  
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHG 225

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L +   M+  G+ P+  T +  LA+CASL +   G   H+ + K G++    +  ++
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G++ E    +       + V WN  +  F +     ++ E F QM       +
Sbjct: 286 LDLYVKCGDV-ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  VK+ FES+++V   LI+ Y+K G  E A RV  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+   + A+  F++M   GI P N    + +S C+    ++ 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G ++  + +   G   + + ++ +V+L  R G++  A      +  K     W  L +  
Sbjct: 465 GLQI-HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLVSG- 521

Query: 601 RCHSDLKMAEFISKQILELDPDDAA--VYVTLSNMYAEAGL----QADAEEQRKLMKMKE 654
              +   + E   K  + +D       V+  +S + A A L    Q      R +     
Sbjct: 522 --FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
              E G + I +Y K   F       SEM +  E
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC-------SLLPSL 437
            + S    +AGF  ++   + +  F+   R         ++  L+AC        ++P  
Sbjct: 5   GAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVP-- 62

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               +IH++ V         VG+ LI+ Y+K G    A RVF +L+A D VSW +M+  Y
Sbjct: 63  ----EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +QNG   +A+ L+ +M   G+ PT     +VLS+C+ + L   G+ +     K +G   E
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSE 177

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQI 616
               + ++ L  R G   +A     ++P + T      +    +C H +  +  F   Q 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             L PD     VT+S++ A      D ++  +L
Sbjct: 238 SGLSPD----CVTISSLLAACASLGDLQKGTQL 266


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/580 (35%), Positives = 347/580 (59%), Gaps = 1/580 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+    L LG + H    KT    D  +  + ++MY KC ++     +   +P  +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GYA++    +A   F  L    +  +  + S     C  +    EG Q+H 
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            +MK    S   V+NA+L MY KCG + +A  VFE +V R+ +SW AII   +Q+G+ EK
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M + G++P+E+T+   L +CA  +  + G   H ++IK  + L  FVG A++D
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALID 520

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A+K L +     + VSWNA I+GF   +++EEA + FS+M+      D F
Sbjct: 521 MYSKCGMMEKAEK-LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 579

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY++IL  C+ L ++   +QIH++I+K + +S+ ++ S+L++ Y+KCG+ +D + +F + 
Sbjct: 580 TYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 639

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V+WN+M+  Y+Q+G   +A+ +FE M +E ++P ++TFLAVL AC H GLV+ G 
Sbjct: 640 PNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 699

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F SM+  YG+ P+  HYSC+VD++GR+G++  AL  I  +P +  A IWR L + C+ 
Sbjct: 700 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKI 759

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  +  IL+L+P+D+A YV LSN+YA AG+  +  + RK+M+   + KEPGCS
Sbjct: 760 HGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 819

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           WIE+ ++++ F   +K+H    ++YE L  L  +++ +G+
Sbjct: 820 WIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGY 859



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 274/545 (50%), Gaps = 16/545 (2%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYST---RN----DSFPDGFIDDGC 100
           A ++F+  P+R  +S + ++F GY    + G+++  +     R+    +S   G++ +G 
Sbjct: 96  AFKVFDGMPQRDTVSWNAMLF-GYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGD 154

Query: 101 SNTVP---VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
              V    +    + ++ D+     VL  CS  E    G + H L  K     D    ++
Sbjct: 155 HRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 214

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L++MYAKC  +   +     MP  +  S + ++AG  +N         F ++    V  +
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             T++++   C  LSA+  G QLH   +K  + +   +  A L MY+KC  + DA+ +F 
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L   N+ S+ AII G+ +     + L +  L+++ G+  +E + + A  +CA ++    
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H   +K        V  AI+DMY   G + EA    +EM  S  +VSWNA IA   
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHE 453

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N   E+ +  F  M+++    DEFTY S+LKAC+   +L    +IH+RI+KS+   +  
Sbjct: 454 QNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSF 513

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG +LI+ Y+KCG  E AE++  +L    VVSWN++I  +S   ++ +A   F KM+  G
Sbjct: 514 VGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 573

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLE- 575
           + P N T+  +L  C++   V+ G+++   ++K+   L  +A+  S +VD+  + G ++ 
Sbjct: 574 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQD 631

Query: 576 IALIF 580
             LIF
Sbjct: 632 FQLIF 636



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 268/585 (45%), Gaps = 42/585 (7%)

Query: 103 TVPVTCYS--LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           T+P++ +S    +   K+    +   CS  + L  G++ HA +  T      FVT  L+ 
Sbjct: 26  TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA-------LFD------------- 200
           MY KC D++    V   MP  D  S N +L GYA          LFD             
Sbjct: 86  MYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL 145

Query: 201 -----------QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
                      +    FL++  +    +  T++ +L  C SL     G Q+H   +K+ +
Sbjct: 146 ISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGF 205

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                  +ALL MY KC  ++ +   F  + ++N +SW+AII G  Q+ D    L L   
Sbjct: 206 DCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE 265

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M++ G+  ++ TF     SCA L    +G   H   +K        +GTA +DMY     
Sbjct: 266 MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A+K    +  + +  S+NA I G+ R+ K  EA+  F  + ++    DE + S   +
Sbjct: 326 LSDAQKLFNSL-PNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFR 384

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+++       Q+H   +KS  +SN+ V +++++ Y KCG+  +A  VF ++ + D VS
Sbjct: 385 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 444

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I A+ QNG   K + LF  M+  G+ P   T+ +VL AC+    +  G ++   ++
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRII 504

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           K    L      + ++D+  + G +E A      L  + T   W  + +        + A
Sbjct: 505 KSRLGLDSFVGIA-LIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEA 562

Query: 610 EFISKQILEL--DPDD---AAVYVTLSNMYA-EAGLQADAEEQRK 648
           +    ++LE+  DPD+   A +  T +N+   E G Q  A+  +K
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 125/539 (23%), Positives = 236/539 (43%), Gaps = 75/539 (13%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+S +   C    A+  GKQ HA+ +  ++     V+N L+ MYIKC  +E A  VF+G+
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 280 VQ-------------------------------RNVISWTAIINGFKQHGDYEKPLRLVC 308
            Q                               R+V+SW ++I+G+  +GD+ K + +  
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G   +  TF V L SC+SL +   G   H   +K G       G+A++DMY+   
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++ +   Q        + VSW+A IAG  +N      +E F +M +      + T++S+ 
Sbjct: 224 KL-DCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++C+ L +L    Q+H   +K+ F ++V +G++ ++ Y KC +  DA+++F+ L   ++ 
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC---------------S 533
           S+N++I  Y+++ +  +A+ +F  +   G+     +      AC               S
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS 402

Query: 534 HSGLVQDGQKVFESMVKEYG---------------ILPEEAHYSCMVDLLGRAGKLEIAL 578
              L Q    V  +++  YG               +  +   ++ ++    + G  E  L
Sbjct: 403 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462

Query: 579 -IFISNLP--IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMY 634
            +F+  L   ++P    +  +  AC     L     I  +I++     D+ V + L +MY
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMY 522

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           ++ G+   AE+         ++++   SW    N I   FS  K   E  K + K+ ++
Sbjct: 523 SKCGMMEKAEKLH-----DRLAEQTVVSW----NAIISGFSLQKQSEEAQKTFSKMLEM 572


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 361/617 (58%), Gaps = 12/617 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C+    L+ G + H+ + K  +  D  +  SL+++Y KCGD+++ + +       +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L  + +     ++F  F ++    ++PN +TY  +L  C     ID G+Q+H+
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  + S   VS  L+ MY K G +E A  V E L +++V+SWT++I G+ QH   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M++ GI P+      A++ CA +     G   HA++   G +    +  A+V+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G I EA    +E+ +    ++WN  ++GF ++   EEA++ F +M ++    + F
Sbjct: 490 LYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S L A + L  +   +QIH+R++K+       VG++LI  Y KCGS+EDA+  FS++
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  + VSWN++I + SQ+GR  +A+ LF++M  EGI+P + TF+ VL+ACSH GLV++G 
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  EYGI P   HY+C++D+ GRAG+L+ A  FI  +PI   A +WR L +AC+ 
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ EF +K +LEL+P D+A YV LSN YA     A+ ++ RK+M+ + + KEPG S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---V 711
           WIEV N ++ FF  ++ H    ++Y  L  +  ++  +G+         D E+E R    
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTD 848

Query: 712 LYHSERLAVGFGLISLP 728
           L HSE+LAV FGL+SLP
Sbjct: 849 LVHSEKLAVTFGLMSLP 865



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 244/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E    GR  HA   K   C + FV  +++ +Y +CG  +    V   MP+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    + A   F ++    + P+  T S++LA C SL  + +G QLH+
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K    S   +  +LL +Y+KCG +E A  +F    + NV+ W  ++  F Q  D  K
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L C M+  GI PN++T+   L +C   R   +G   H+  +K G     +V   ++D
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A++ L EM K    VSW + IAG+ +++  ++A+ AF +M +     D  
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S +  C+ + ++    QIH+RI  S +  +V + ++L+  Y +CG   +A   F ++
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++WN ++  ++Q+G   +A+ +F +M   G++    TF++ LSA ++   ++ G+
Sbjct: 508 EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   ++K       E   + ++ L G+ G  E A +  S +  +     W  +  +C  
Sbjct: 568 QIHARVIKTGHSFETEVG-NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQ 625

Query: 603 HS 604
           H 
Sbjct: 626 HG 627



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 264/574 (45%), Gaps = 18/574 (3%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+   C   GRR+      HA      +   + V   L+++Y+K G +     V +++  
Sbjct: 46  CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+N L ++A   + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+  V NA++T+Y++CG    AE VF  +  R+ +++  +I+G  Q G  
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHG 225

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L +   M+  G+ P+  T +  LA+CASL +   G   H+ + K G++    +  ++
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G++ E    +       + V WN  +  F +     ++ E F QM       +
Sbjct: 286 LDLYVKCGDV-ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  VK+ FES+++V   LI+ Y+K G  E A RV  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+   + A+  F++M   GI P N    + +S C+    ++ 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G ++  + +   G   + + ++ +V+L  R G++  A      +  K     W  L +  
Sbjct: 465 GLQI-HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLVSG- 521

Query: 601 RCHSDLKMAEFISKQILELDPDDAA--VYVTLSNMYAEAGL----QADAEEQRKLMKMKE 654
              +   + E   K  + +D       V+  +S + A A L    Q      R +     
Sbjct: 522 --FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
              E G + I +Y K   F       SEM +  E
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC-------SLLPSL 437
            + S    +AGF  ++   + +  F+   R         ++  L+AC        ++P  
Sbjct: 5   GAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVP-- 62

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               +IH++ V         VG+ LI+ Y+K G    A RVF +L+A D VSW +M+  Y
Sbjct: 63  ----EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +QNG   +A+ L+ +M   G+ PT     +VLS+C+ + L   G+ +     K +G   E
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSE 177

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQI 616
               + ++ L  R G   +A     ++P + T      +    +C H +  +  F   Q 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             L PD     VT+S++ A      D ++  +L
Sbjct: 238 SGLSPD----CVTISSLLAACASLGDLQKGTQL 266


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/671 (33%), Positives = 364/671 (54%), Gaps = 22/671 (3%)

Query: 82  NGYSTRNDSFPDGFIDDGCSNT-VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYH 140
           NGY+ R D    G +   CS   + V C           +  VL  C+  + L+ G+  H
Sbjct: 287 NGYAQRGD--VTGVLKLFCSMMELDVKCNEFT-------LTTVLKGCANSKNLKQGQVIH 337

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
           +LI K    G++F+   LV+MY+KCG     + V K +   DI   + L+    +    +
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           ++   F  +   D  PN YT  ++L+   +   +  G+ +HA   K  + +  AVSNAL+
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           TMY+K G + D   ++E +V R++ISW A ++G    G Y++PL +   M E+G  PN Y
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF   L SC+ L + H G   HA +IK  +   +FV TA++DMY+    + +A      +
Sbjct: 518 TFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                  +W   I  + +  + E+A+  F QM +     +EFT +  L  CS L SL   
Sbjct: 578 -SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +Q+HS + KS   S++ VGS+L++ Y KCG  E+AE +F  L   D ++WN++I  Y+QN
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G+  KA+  F  M+ EGI P   TF  +LSACSH GLV++G++ F SM +++GI P   H
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            +CMVD+LGR GK +    FI  + +   A IW  +  A + H++L + E  + ++ EL 
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P++ + Y+ LSN++A  G   D +  R LM  K + KEPGCSW+E   +++ F S + SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876

Query: 681 SEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPA 729
            ++ +++ KL +L +++  I +            + EK++ + +HSERLA+GF LIS  +
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS 936

Query: 730 KNKFECSRTLE 740
           + K    + L 
Sbjct: 937 EKKIRIFKNLR 947



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 246/483 (50%), Gaps = 8/483 (1%)

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            C+S +  L  ++   +L  C+ +  L + +  H LI K  +  D  +  SLVN+YAKC 
Sbjct: 104 VCWSSKKKL--KYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR 161

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
                  V+ +MP  D+ S   L+ G       + +   F ++    + PN +T +T L 
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C    A+D GKQ+HAQ  KL  L    V +AL+ +Y KCG +E A  +F G+ ++N ++
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  ++NG+ Q GD    L+L C M E  +  NE+T T  L  CA+ +N   G + H+ +I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G    +F+G  +VDMYS  G   +A    K + K    V W+A I    +  ++EE+I
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI-KKPDIVVWSALITCLDQQGQSEESI 400

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F  M   D   +++T  S+L A +   +L   + IH+ + K  FE++V V ++L+  Y
Sbjct: 401 KLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K G   D  +++  +   D++SWN+ +      G   + + +F  M+ EG  P   TF+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC--MVDLLGRAGKLEIALIFISNL 584
           ++L +CS    V  G++V   ++K      ++ ++ C  ++D+  +   LE A +  + L
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQ---LDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577

Query: 585 PIK 587
            ++
Sbjct: 578 SVR 580


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/629 (35%), Positives = 350/629 (55%), Gaps = 12/629 (1%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E+   K  +  VL  C+    L  G+  HAL  ++    D+F+  SLV+MY+KCG +   
Sbjct: 46  ETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA 105

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + V  ++   D+ + + ++ G  +     +A   F  +     +PN +T S++++   ++
Sbjct: 106 LKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNM 165

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             +  G+ +H    K  + S   VSN L+ MY+K   +ED   VFE +   +++SW A++
Sbjct: 166 GDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALL 225

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +GF       +  R+   M  +G  PN +TF   L SC+SL +   G   HA +IK    
Sbjct: 226 SGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSD 285

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
             DFVGTA+VDMY+    + +A      +  +    SW   I+G+ +  + E+A++ F Q
Sbjct: 286 DDDFVGTALVDMYAKARCLEDAGVAFDRL-VNRDIFSWTVIISGYAQTDQAEKAVKYFRQ 344

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M R     +E+T +S L  CS + +L    Q+H+  VK+    ++ VGS+L++ Y KCG 
Sbjct: 345 MQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            E AE +F  L + D+VSWN++I  YSQ+G+  KA+  F  M+ EGI P  +TF+ VLSA
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS  GLV++G+K F+SM K YGI P   HY+CMVD+LGRAGK     IFI  + + P + 
Sbjct: 465 CSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL 524

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IW  +  AC+ H ++   E  +K++ E++P   + Y+ LSN++A  G   D    R LM 
Sbjct: 525 IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMT 584

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------- 702
            + I KEPGCSW+EV  +++ F SQ+ SH ++ ++Y KL +L Q +  IG+         
Sbjct: 585 SRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLH 644

Query: 703 --TDNEKEDRVLYHSERLAVGFGLISLPA 729
             ++ EK + + YHSERLA+ F L+S  A
Sbjct: 645 NVSNKEKMEHLYYHSERLALSFALLSTNA 673



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 5/456 (1%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  +  S N LL GYA+     +    F K+   + + + +T ST+L  C +  ++ EG
Sbjct: 11  MPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREG 70

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K LHA  ++        +  +L+ MY KCG + DA  VF  +   +V++W+A+I G  Q 
Sbjct: 71  KVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQ 130

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  ++   L  LMR  G  PN++T +  +++  ++ +   G   H  + K G    + V 
Sbjct: 131 GHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVS 190

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             ++ MY     + +  K  + M  +   VSWNA ++GF+ +Q        F QM+    
Sbjct: 191 NPLIMMYMKSRCVEDGNKVFEAM-TNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGF 249

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             + FT+ S+L++CS L      +Q+H+ I+K+  + +  VG++L++ Y K    EDA  
Sbjct: 250 KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGV 309

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F +L   D+ SW  +I  Y+Q  +A KA+  F +M  EGI+P   T  + LS CSH   
Sbjct: 310 AFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMAT 369

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           +++G+++    VK  G   +    S +VDL G+ G +E A      L I      W  + 
Sbjct: 370 LENGRQLHAVAVKA-GHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-ISRDIVSWNTII 427

Query: 598 AACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS 631
           +    H   + A    + +L   + PD+A     LS
Sbjct: 428 SGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLS 463



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 173/316 (54%), Gaps = 2/316 (0%)

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ME AE +F G+ ++N +SW A++NG+ Q GD +K L+L C M+E     +++T +  L  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA+  +   G + HA  ++ G  + +F+G ++VDMYS  G +++A K   ++ ++   V+
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI-RNPDVVA 119

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W+A I G  +    +EA E F  M R  A  ++FT SS++   + +  L   + IH  I 
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  FES+  V + LI  Y K    ED  +VF  +T  D+VSWN+++  +  +    +   
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F +M++EG +P   TF++VL +CS     + G++V   ++K      ++   + +VD+ 
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSD-DDDFVGTALVDMY 298

Query: 569 GRAGKLEIALIFISNL 584
            +A  LE A +    L
Sbjct: 299 AKARCLEDAGVAFDRL 314


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/671 (33%), Positives = 364/671 (54%), Gaps = 22/671 (3%)

Query: 82  NGYSTRNDSFPDGFIDDGCSNT-VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYH 140
           NGY+ R D    G +   CS   + V C           +  VL  C+  + L+ G+  H
Sbjct: 287 NGYAQRGD--VTGVLKLFCSMMELDVKCNEFT-------LTTVLKGCANSKNLKQGQVIH 337

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
           +LI K    G++F+   LV+MY+KCG     + V K +   DI   + L+    +    +
Sbjct: 338 SLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSE 397

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           ++   F  +   D  PN YT  ++L+   +   +  G+ +HA   K  + +  AVSNAL+
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           TMY+K G + D   ++E +V R++ISW A ++G    G Y++PL +   M E+G  PN Y
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF   L SC+ L + H G   HA +IK  +   +FV TA++DMY+    + +A      +
Sbjct: 518 TFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                  +W   I  + +  + E+A+  F QM +     +EFT +  L  CS L SL   
Sbjct: 578 -SVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGG 636

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +Q+HS + KS   S++ VGS+L++ Y KCG  E+AE +F  L   D ++WN++I  Y+QN
Sbjct: 637 QQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQN 696

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G+  KA+  F  M+ EGI P   TF  +LSACSH GLV++G++ F SM +++GI P   H
Sbjct: 697 GQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDH 756

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            +CMVD+LGR GK +    FI  + +   A IW  +  A + H++L + E  + ++ EL 
Sbjct: 757 CACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQ 816

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P++ + Y+ LSN++A  G   D +  R LM  K + KEPGCSW+E   +++ F S + SH
Sbjct: 817 PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSH 876

Query: 681 SEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPA 729
            ++ +++ KL +L +++  I +            + EK++ + +HSERLA+GF LIS  +
Sbjct: 877 PQIQEIHLKLDELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTSS 936

Query: 730 KNKFECSRTLE 740
           + K    + L 
Sbjct: 937 EKKIRIFKNLR 947



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/483 (29%), Positives = 246/483 (50%), Gaps = 8/483 (1%)

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            C+S +  L  ++   +L  C+ +  L + +  H LI K  +  D  +  SLVN+YAKC 
Sbjct: 104 VCWSSKKKL--KYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCR 161

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
                  V+ +MP  D+ S   L+ G       + +   F ++    + PN +T +T L 
Sbjct: 162 YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLK 221

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C    A+D GKQ+HAQ  KL  L    V +AL+ +Y KCG +E A  +F G+ ++N ++
Sbjct: 222 ACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVT 281

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  ++NG+ Q GD    L+L C M E  +  NE+T T  L  CA+ +N   G + H+ +I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G    +F+G  +VDMYS  G   +A    K + K    V W+A I    +  ++EE+I
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI-KKPDIVVWSALITCLDQQGQSEESI 400

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F  M   D   +++T  S+L A +   +L   + IH+ + K  FE++V V ++L+  Y
Sbjct: 401 KLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMY 460

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K G   D  +++  +   D++SWN+ +      G   + + +F  M+ EG  P   TF+
Sbjct: 461 MKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFI 520

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC--MVDLLGRAGKLEIALIFISNL 584
           ++L +CS    V  G++V   ++K      ++ ++ C  ++D+  +   LE A +  + L
Sbjct: 521 SILGSCSCLFDVHYGRQVHAHIIKNQ---LDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577

Query: 585 PIK 587
            ++
Sbjct: 578 SVR 580


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/621 (35%), Positives = 366/621 (58%), Gaps = 18/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAK-CGDIKSMVAVVKQMPY 180
           V+  CS      +G   +  + KT     D  V   L++M+ K  GD+ S   V  +MP 
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   ++  +A+      A   FL ++     P+ +TYS++L+ C  L  +  GKQL
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H++ ++L       V  +L+ MY KC   G ++D+  VFE + + NV+SWTAII  + Q 
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 331

Query: 298 GDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G+ +K  + L C M    I PN ++F+  L +C +L + + G   ++  +K G+A  + V
Sbjct: 332 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 391

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G +++ MY+  G + +A+K    + +  + VS+NA + G+ +N K+EEA   F+++    
Sbjct: 392 GNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 450

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                FT++S+L   + + ++   EQIH R++K  ++SN  + ++LI  Y++CG+ E A 
Sbjct: 451 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 510

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +VF+++   +V+SW SMI  ++++G A +A+ +F KM+  G +P   T++AVLSACSH G
Sbjct: 511 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 570

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           ++ +GQK F SM KE+GI+P   HY+CMVDLLGR+G L  A+ FI+++P+   A +WR L
Sbjct: 571 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 630

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H + ++    ++ ILE +PDD A Y+ LSN++A AG   D  + RK MK + + 
Sbjct: 631 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 690

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           KE GCSWIEV N+++RF     SH +  ++Y++L QL  +I+++G+            + 
Sbjct: 691 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 750

Query: 706 EKEDRVLYHSERLAVGFGLIS 726
           +KE  +  HSE++AV FGLIS
Sbjct: 751 QKEQFLFQHSEKIAVAFGLIS 771



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 248/463 (53%), Gaps = 9/463 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-YL 181
           +L  C R    +LG+  H  + ++ +  D  V  +L+++Y+KCGD ++   + + M    
Sbjct: 50  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 109

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S + +++ +A N++  QA   FL +  +   PN Y ++ ++  C + +    G+ ++
Sbjct: 110 DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 169

Query: 242 AQTMKLQYL-SKTAVSNALLTMYIK-CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
              +K  YL +   V   L+ M++K  G +  A  VF+ + +RN+++WT +I  F Q G 
Sbjct: 170 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 229

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               + L   M   G  P+ +T++  L++C  L    +G   H++VI+ G+AL   VG +
Sbjct: 230 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 289

Query: 360 IVDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-EAIEAFSQMVRN 415
           +VDMY+     G + +++K  ++M +  + +SW A I  + ++ + + EAIE F +M+  
Sbjct: 290 LVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSGECDKEAIELFCKMISG 348

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + F++SS+LKAC  L    T EQ++S  VK    S   VG+SLI  Y + G  EDA
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            + F  L   ++VS+N+++  Y++N ++ +A +LF ++   GI  +  TF ++LS  +  
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           G +  G+++   ++K  G    +   + ++ +  R G +E A 
Sbjct: 469 GAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAF 510



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%), Gaps = 14/396 (3%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
            AFS    +   +  P+  TYS +L  C        GK +H + M+      + V N L+
Sbjct: 27  HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 86

Query: 261 TMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           ++Y KCG  E A  +FEG+  +R+++SW+A+++ F  +    + +     M E G  PNE
Sbjct: 87  SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 146

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQL 377
           Y F   + +C++   + +G + +  V+K G    D  VG  ++DM+  G G++  A K  
Sbjct: 147 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 206

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M +  + V+W   I  F +     +AI+ F  M  +    D FTYSS+L AC+ L  L
Sbjct: 207 DKMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 265

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMI 494
           A  +Q+HSR+++     +V VG SL++ Y KC   GS +D+ +VF Q+   +V+SW ++I
Sbjct: 266 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 325

Query: 495 KAYSQNGRARK-AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
            AY Q+G   K AI LF KM+   IRP + +F +VL AC +      G++V+   VK  G
Sbjct: 326 TAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK-LG 384

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIA-----LIFISNL 584
           I       + ++ +  R+G++E A     ++F  NL
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 420



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 14/299 (4%)

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +   A      M + +A  D  TYS +LK+C    +    + +H ++++S  E +  V +
Sbjct: 24  RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 83

Query: 461 SLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +LI  Y+KCG  E A  +F  +    D+VSW++M+  ++ N    +AI  F  M+  G  
Sbjct: 84  TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 143

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGR-AGKLEIA 577
           P    F AV+ ACS++     G+ ++  +VK  G L  +    C ++D+  + +G L  A
Sbjct: 144 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 578 LIFISNLPIKP--TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
                 +P +   T  +    FA   C  D  +  F+  ++    P D   Y ++ +   
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVP-DRFTYSSVLSACT 260

Query: 636 EAGLQADAEE-QRKLMKMK-EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           E GL A  ++   +++++   +    GCS +++Y K     + + S  +  KV+E++ +
Sbjct: 261 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC----AADGSVDDSRKVFEQMPE 315


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 216/651 (33%), Positives = 367/651 (56%), Gaps = 48/651 (7%)

Query: 136  GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
            GR  H  + +  +  D  + ++LV+MY+KCG ++    V + +   +  S N LLAGY +
Sbjct: 396  GRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ 455

Query: 196  NALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
                ++A   +  +   D +QP+ +T++T+L +C +    ++G+Q+HA  ++        
Sbjct: 456  EGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 515

Query: 255  VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            V   L+ MY +CG +  A+ +F  + +RN  SW ++I G++Q+G+ ++ LRL   M+ +G
Sbjct: 516  VETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 575

Query: 315  IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI---W 371
            I P+ ++ +  L+SC SL +S  G   H  +++  M     +   +VDMY+  G +   W
Sbjct: 576  IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAW 635

Query: 372  ----------------------------EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
                                        +AK    +M +  +++ WN+ +AG+      +
Sbjct: 636  KVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTAL-WNSILAGYANKGLKK 694

Query: 404  EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSL 462
            E+   F +M+ +D   D  T  +I+  CS LP+L   +Q+HS I+K  F   +V + ++L
Sbjct: 695  ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754

Query: 463  IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
            ++ Y+KCG+   A  VF  +   ++VSWN+MI  YS++G +++A+IL+E+M  +G+ P  
Sbjct: 755  VDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNE 814

Query: 523  STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
             TFLA+LSACSH+GLV++G ++F SM ++Y I  +  HY+CMVDLLGRAG+LE A  F+ 
Sbjct: 815  VTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVE 874

Query: 583  NLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
             +PI+P    W  L  ACR H D+ M    ++++ ELDP +   YV +SN+YA AG   +
Sbjct: 875  KMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKE 934

Query: 643  AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
             E+ R++MKMK + K+PG SWIE+ ++I  F + +K+H +  ++Y  L+ L  Q + +G+
Sbjct: 935  VEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 994

Query: 703  T-------DNEKEDR-------VLYHSERLAVGFGLISLPAKNKFECSRTL 739
                     N K+ +       +L HSERLA+  GLISLP K+     + L
Sbjct: 995  IPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNL 1045



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 250/467 (53%), Gaps = 11/467 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     V+  C   E +   R+  + + K  +  + FV  +LV+ YA+ G +   V  +
Sbjct: 174 DKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSL 233

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++    + + N ++AGY K   +++A+  F ++  I V P+++T+++ L +CG+L + D
Sbjct: 234 DEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 293

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GKQ+H++ +   +   T V NAL+ MY KC   E    VF+ + +RN ++W +II+   
Sbjct: 294 GGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEA 353

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q G +   L L   M+E G   N +     L + A L +   G   H  +++  +     
Sbjct: 354 QFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDII 413

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +G+A+VDMYS  G + EA +  + + +  + VS+NA +AG+ +  K EEA+E +  M   
Sbjct: 414 LGSALVDMYSKCGMVEEAHQVFRSLLER-NEVSYNALLAGYVQEGKAEEALELYHDMQSE 472

Query: 416 DA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           D    D+FT++++L  C+   +     QIH+ ++++    N+ V + L+  Y++CG    
Sbjct: 473 DGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNY 532

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A+ +F+++   +  SWNSMI+ Y QNG  ++A+ LF++M + GI+P   +  ++LS+C  
Sbjct: 533 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 592

Query: 535 SGLVQDGQKVFESMVK----EYGILPEEAHYSCMVDLLGRAGKLEIA 577
               Q G+++   +V+    E GIL        +VD+  + G ++ A
Sbjct: 593 LSDSQKGRELHNFIVRNTMEEEGILQ-----VVLVDMYAKCGSMDYA 634



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 138/436 (31%), Positives = 231/436 (52%), Gaps = 9/436 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C      + G++ H+ +      GD FV  +L++MYAKC D +S + V  +M   + 
Sbjct: 283 LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 342

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++  A+   F+ A   FL++     + N +   ++L     L+ I +G++LH  
Sbjct: 343 VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGH 402

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++    S   + +AL+ MY KCGM+E+A  VF  L++RN +S+ A++ G+ Q G  E+ 
Sbjct: 403 LVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEA 462

Query: 304 LRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
           L L   M+ EDGI P+++TFT  L  CA+ RN + G   HA +I+  +     V T +V 
Sbjct: 463 LELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVH 522

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G +  AK+    M +  ++ SWN+ I G+ +N +T+EA+  F QM  N    D F
Sbjct: 523 MYSECGRLNYAKEIFNRMAER-NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 581

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + SS+L +C  L       ++H+ IV++  E    +   L++ Y KCGS + A +V+ Q 
Sbjct: 582 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT 641

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV+  N M+ A+  +GRA  A  LF++M        NS    +L+  ++ GL ++  
Sbjct: 642 IKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNS----ILAGYANKGLKKESF 697

Query: 543 KVFESMVK---EYGIL 555
             F  M++   EY +L
Sbjct: 698 NHFLEMLESDIEYDVL 713



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/553 (22%), Positives = 258/553 (46%), Gaps = 45/553 (8%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---DIKSMVAVVKQMPYLDI 183
           C      + G+  H  +       D ++   ++ +YA+ G   D+     + ++MP  ++
Sbjct: 81  CIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNL 140

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N ++  YA+   + +    + ++ G     + +T+ +++  C ++  +   +QL + 
Sbjct: 141 TAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSS 200

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V  AL+  Y + G M+DA +  + +   +V++W A+I G+ +   +E+ 
Sbjct: 201 VVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEA 260

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
             +   M + G+ P+ +TF  AL  C +LR+   G   H+++I  G     FVG A++DM
Sbjct: 261 WGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDM 320

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+   +     K   EMG+  + V+WN+ I+   +     +A+  F +M  +    + F 
Sbjct: 321 YAKCDDEESCLKVFDEMGER-NQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFN 379

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
             SIL A + L  +    ++H  +V++   S++ +GS+L++ Y+KCG  E+A +VF  L 
Sbjct: 380 LGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLL 439

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQ 542
             + VS+N+++  Y Q G+A +A+ L+  M  E GI+P   TF  +L+ C++      G+
Sbjct: 440 ERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGR 499

Query: 543 KVFESMVKE----------------------------YGILPEEAHYS--CMVDLLGRAG 572
           ++   +++                             +  + E   YS   M++   + G
Sbjct: 500 QIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNG 559

Query: 573 KLEIALIFISNLP---IKPTAPIWRPLFAACRCHSD----LKMAEFISKQILELDPDDAA 625
           + + AL     +    IKP       + ++C   SD     ++  FI +  +E   ++  
Sbjct: 560 ETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTME---EEGI 616

Query: 626 VYVTLSNMYAEAG 638
           + V L +MYA+ G
Sbjct: 617 LQVVLVDMYAKCG 629



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 235/522 (45%), Gaps = 60/522 (11%)

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED- 271
           DV P    YS+++  C   ++   GK +H Q +   Y     +   +L +Y + G ++D 
Sbjct: 68  DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125

Query: 272 --AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
             A  +FE + +RN+ +W  +I  + +  DY + LRL   MR  G   +++TF   + +C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC 185

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            ++ +        + V+K G+    FVG A+VD Y+  G + +A   L E+ +  S V+W
Sbjct: 186 IAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI-EGTSVVTW 244

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA IAG+ +    EEA   F +M++     D FT++S L+ C  L S    +Q+HS+++ 
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
             F+ +  VG++LI+ Y KC   E   +VF ++   + V+WNS+I A +Q G    A++L
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVL 364

Query: 510 FEKMVVEGIRPTNSTFLAVLSAC-----------------------------------SH 534
           F +M   G +       ++L A                                    S 
Sbjct: 365 FLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSK 424

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP----IKPTA 590
            G+V++  +VF S+++       E  Y+ ++    + GK E AL    ++     I+P  
Sbjct: 425 CGMVEEAHQVFRSLLER-----NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQ 479

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +  L   C    +      I   ++  +   +  V   L +MY+E G    A+E    
Sbjct: 480 FTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE---- 535

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
                +++    SW    N +   + QN    E  +++++++
Sbjct: 536 -IFNRMAERNAYSW----NSMIEGYQQNGETQEALRLFKQMQ 572



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 154/331 (46%), Gaps = 52/331 (15%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N +   C+SL S+L         S C      + GR  H  I +  +  +  +   LV+M
Sbjct: 574 NGIKPDCFSLSSML---------SSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDM 624

Query: 162 YAKCGDI------------------KSMVA-------------VVKQMPYLDIASCNCLL 190
           YAKCG +                    MV+             +  QM   + A  N +L
Sbjct: 625 YAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSIL 684

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           AGYA   L  ++F+ FL++   D++ +  T  T++ +C SL A++ G QLH+  +K  ++
Sbjct: 685 AGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFV 744

Query: 251 SKTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           + + V   AL+ MY KCG +  A +VF+ +  +N++SW A+I+G+ +HG  ++ L L   
Sbjct: 745 NCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEE 804

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDM 363
           M + G+ PNE TF   L++C     SH G +     I   M     +       T +VD+
Sbjct: 805 MPKKGMYPNEVTFLAILSAC-----SHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDL 859

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
               G + +AK+ +++M       +W A + 
Sbjct: 860 LGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 890


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/621 (35%), Positives = 366/621 (58%), Gaps = 18/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAK-CGDIKSMVAVVKQMPY 180
           V+  CS      +G   +  + KT     D  V   L++M+ K  GD+ S   V  +MP 
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 193

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   ++  +A+      A   FL ++     P+ +TYS++L+ C  L  +  GKQL
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H++ ++L       V  +L+ MY KC   G ++D+  VFE + + NV+SWTAII  + Q 
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 313

Query: 298 GDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G+ +K  + L C M    I PN ++F+  L +C +L + + G   ++  +K G+A  + V
Sbjct: 314 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 373

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G +++ MY+  G + +A+K    + +  + VS+NA + G+ +N K+EEA   F+++    
Sbjct: 374 GNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 432

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                FT++S+L   + + ++   EQIH R++K  ++SN  + ++LI  Y++CG+ E A 
Sbjct: 433 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 492

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +VF+++   +V+SW SMI  ++++G A +A+ +F KM+  G +P   T++AVLSACSH G
Sbjct: 493 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 552

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           ++ +GQK F SM KE+GI+P   HY+CMVDLLGR+G L  A+ FI+++P+   A +WR L
Sbjct: 553 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 612

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H + ++    ++ ILE +PDD A Y+ LSN++A AG   D  + RK MK + + 
Sbjct: 613 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 672

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           KE GCSWIEV N+++RF     SH +  ++Y++L QL  +I+++G+            + 
Sbjct: 673 KEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEE 732

Query: 706 EKEDRVLYHSERLAVGFGLIS 726
           +KE  +  HSE++AV FGLIS
Sbjct: 733 QKEQFLFQHSEKIAVAFGLIS 753



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 248/463 (53%), Gaps = 9/463 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-YL 181
           +L  C R    +LG+  H  + ++ +  D  V  +L+++Y+KCGD ++   + + M    
Sbjct: 32  LLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKR 91

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S + +++ +A N++  QA   FL +  +   PN Y ++ ++  C + +    G+ ++
Sbjct: 92  DLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIY 151

Query: 242 AQTMKLQYL-SKTAVSNALLTMYIK-CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
              +K  YL +   V   L+ M++K  G +  A  VF+ + +RN+++WT +I  F Q G 
Sbjct: 152 GFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGC 211

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               + L   M   G  P+ +T++  L++C  L    +G   H++VI+ G+AL   VG +
Sbjct: 212 ARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCS 271

Query: 360 IVDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-EAIEAFSQMVRN 415
           +VDMY+     G + +++K  ++M +  + +SW A I  + ++ + + EAIE F +M+  
Sbjct: 272 LVDMYAKCAADGSVDDSRKVFEQMPEH-NVMSWTAIITAYVQSGECDKEAIELFCKMISG 330

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + F++SS+LKAC  L    T EQ++S  VK    S   VG+SLI  Y + G  EDA
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            + F  L   ++VS+N+++  Y++N ++ +A +LF ++   GI  +  TF ++LS  +  
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           G +  G+++   ++K  G    +   + ++ +  R G +E A 
Sbjct: 451 GAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGNIEAAF 492



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%), Gaps = 14/396 (3%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
            AFS    +   +  P+  TYS +L  C        GK +H + M+      + V N L+
Sbjct: 9   HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 68

Query: 261 TMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           ++Y KCG  E A  +FEG+  +R+++SW+A+++ F  +    + +     M E G  PNE
Sbjct: 69  SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 128

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQL 377
           Y F   + +C++   + +G + +  V+K G    D  VG  ++DM+  G G++  A K  
Sbjct: 129 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 188

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M +  + V+W   I  F +     +AI+ F  M  +    D FTYSS+L AC+ L  L
Sbjct: 189 DKMPER-NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLL 247

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMI 494
           A  +Q+HSR+++     +V VG SL++ Y KC   GS +D+ +VF Q+   +V+SW ++I
Sbjct: 248 ALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAII 307

Query: 495 KAYSQNGRARK-AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
            AY Q+G   K AI LF KM+   IRP + +F +VL AC +      G++V+   VK  G
Sbjct: 308 TAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK-LG 366

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIA-----LIFISNL 584
           I       + ++ +  R+G++E A     ++F  NL
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 402



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 14/299 (4%)

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +   A      M + +A  D  TYS +LK+C    +    + +H ++++S  E +  V +
Sbjct: 6   RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 65

Query: 461 SLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +LI  Y+KCG  E A  +F  +    D+VSW++M+  ++ N    +AI  F  M+  G  
Sbjct: 66  TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGR-AGKLEIA 577
           P    F AV+ ACS++     G+ ++  +VK  G L  +    C ++D+  + +G L  A
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 578 LIFISNLPIKP--TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
                 +P +   T  +    FA   C  D  +  F+  ++    P D   Y ++ +   
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARD-AIDLFLDMELSGYVP-DRFTYSSVLSACT 242

Query: 636 EAGLQADAEE-QRKLMKMK-EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           E GL A  ++   +++++   +    GCS +++Y K     + + S  +  KV+E++ +
Sbjct: 243 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC----AADGSVDDSRKVFEQMPE 297


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 360/617 (58%), Gaps = 12/617 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C+    L+ G + H+ + K  +  D  +  SL+++Y KCGD+++ + +       +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTN 309

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L  + +     ++F  F ++    ++PN +TY  +L  C     ID G+Q+H+
Sbjct: 310 VVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHS 369

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  + S   VS  L+ MY K G +E A  V E L +++V+SWT++I G+ QH   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD 429

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M++ GI P+      A++ CA +     G   HA++   G +    +  A+V+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVN 489

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G I EA    +EM +    ++ N  ++GF ++   EEA++ F +M ++    + F
Sbjct: 490 LYARCGRIREAFSSFEEM-ELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S L A + L  +   +QIH+R++K+       VG++LI  Y KCGS+EDA+  FS++
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  + VSWN++I + SQ+GR  +A+ LF++M  EGI+P + TF+ VL+ACSH GLV++G 
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGL 668

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  EYGI P   HY+C++D+ GRAG+L+ A  FI  +PI   A +WR L +AC+ 
Sbjct: 669 SYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKV 728

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ EF +K +LEL+P D+A YV LSN YA     A+ ++ RK+M+ + + KEPG S
Sbjct: 729 HKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---V 711
           WIEV N ++ FF  ++ H    ++Y  L  +  ++  +G+         D E+E R    
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTD 848

Query: 712 LYHSERLAVGFGLISLP 728
           L HSE+LAV FGL+SLP
Sbjct: 849 LVHSEKLAVTFGLMSLP 865



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 243/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E    GR  HA   K   C + FV  +++ +Y +CG  +    V   MP+ D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    + A   F ++    + P+  T S++LA C SL  + +G QLH+
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K    S   +  +LL +Y+KCG +E A  +F    + NV+ W  ++  F Q  D  K
Sbjct: 269 YLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAK 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L C M+  GI PN++T+   L +C   R   +G   H+  +K G     +V   ++D
Sbjct: 329 SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A++ L EM K    VSW + IAG+ +++  ++A+ AF +M +     D  
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNI 447

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S +  C+ + ++    QIH+RI  S +  +V + ++L+  Y +CG   +A   F ++
Sbjct: 448 GLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEM 507

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++ N ++  ++Q+G   +A+ +F +M   G++    TF++ LSA ++   ++ G+
Sbjct: 508 ELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   ++K       E   + ++ L G+ G  E A +  S +  +     W  +  +C  
Sbjct: 568 QIHARVIKTGHSFETEVG-NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQ 625

Query: 603 HS 604
           H 
Sbjct: 626 HG 627



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 231/467 (49%), Gaps = 8/467 (1%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+   C   GRR+      HA      +   + V   L+++Y+K G +     V +++  
Sbjct: 46  CALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSA 105

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+N L ++A   + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLI 165

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+  V NA++T+Y++CG    AE VF  +  R+ +++  +I+G  Q G  
Sbjct: 166 HAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHG 225

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L +   M+  G+ P+  T +  LA+CASL +   G   H+ + K G++    +  ++
Sbjct: 226 EHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSL 285

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G++ E    +       + V WN  +  F +     ++ E F QM       +
Sbjct: 286 LDLYVKCGDV-ETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  VK+ FES+++V   LI+ Y+K G  E A RV  
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+   + A+  F++M   GI P N    + +S C+    ++ 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G ++  + +   G   + + ++ +V+L  R G++  A      + +K
Sbjct: 465 GLQI-HARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELK 510



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC-------SLLPSL 437
            + S    +AGF  ++   + +  F+   R         ++  L+AC        ++P  
Sbjct: 5   GAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVP-- 62

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               +IH++ V         VG+ LI+ Y+K G    A RVF +L+A D VSW +M+  Y
Sbjct: 63  ----EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +QNG   +A+ L+ +M   G+ PT     +VLS+C+ + L   G+ +     K +G   E
Sbjct: 119 AQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYK-HGFCSE 177

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQI 616
               + ++ L  R G   +A     ++P + T      +    +C H +  +  F   Q 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQF 237

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             L PD     VT+S++ A      D ++  +L
Sbjct: 238 SGLSPD----CVTISSLLAACASLGDLQKGTQL 266


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/627 (33%), Positives = 360/627 (57%), Gaps = 11/627 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D + V  ++   +R + L  G++ HA++ +     + F++   +N+Y+KCG++   + 
Sbjct: 72  LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +  +M   ++ S   ++ G+A N+ F +A S F ++         +  S++L  C SL A
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I  G Q+H   +K  +  +  V + L  MY KCG + DA   FE +  ++ + WT++I+G
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDG 251

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F ++GD++K L     M  D +  +++     L++C++L+ S  G   HA ++K G    
Sbjct: 252 FVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYE 311

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            F+G A+ DMYS  G++  A    +      S VS  A I G+    + E+A+  F  + 
Sbjct: 312 TFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     +EFT++S++KAC+    L    Q+H ++VK  F+ +  V S+L++ Y KCG ++
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFD 431

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            + ++F ++   D ++WN+++  +SQ+G  R AI  F  M+  G++P   TF+ +L  CS
Sbjct: 432 HSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCS 491

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+G+V+DG   F SM K YG++P+E HYSC++DLLGRAGKL+ A  FI+N+P +P    W
Sbjct: 492 HAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGW 551

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
                AC+ H D++ A+F + ++++L+P+++  +V LSN+YA+     D +  RK++K  
Sbjct: 552 CSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDG 611

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---------- 703
            ++K PG SW+++ NK + F  ++ SH +  ++YEKL  L+ QI+ IG+           
Sbjct: 612 NMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDM 671

Query: 704 -DNEKEDRVLYHSERLAVGFGLISLPA 729
            DN KE  + YHSER+AV F L++ P 
Sbjct: 672 DDNLKEKLLHYHSERIAVAFSLLTCPT 698


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/666 (33%), Positives = 359/666 (53%), Gaps = 68/666 (10%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG------- 166
            LD     ++L  C R +     RR HA I KT    + F+   LV+ Y KCG       
Sbjct: 16  FLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARK 75

Query: 167 ------------------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
                                    +     V K MP  D  S N +++G+A++  F++A
Sbjct: 76  VFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEA 135

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
             FF+ +   D   N Y++ + L+ C  L+ ++ G Q+HA   K +YL    + +AL+ M
Sbjct: 136 LRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KCG++  A+  F+G+  RN++SW ++I  ++Q+G   K L +  +M ++G++P+E T 
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITL 255

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM- 380
              +++CAS      G   HA+V+KR     D V G A+VDMY+    + EA+     M 
Sbjct: 256 ASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315

Query: 381 --------------GKSASS---------------VSWNAQIAGFFRNQKTEEAIEAFSQ 411
                          ++AS                VSWNA IAG+ +N + EEA+  F  
Sbjct: 316 LRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLL 375

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEA 465
           + R       +T+ ++L AC+ L  L    Q H++I+K  F      ES++ VG+SLI+ 
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDM 435

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCG  ED   VF ++   DVVSWN+MI  Y+QNG    A+ +F KM+V G +P + T 
Sbjct: 436 YMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTM 495

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + VLSACSH+GLV++G++ F SM  E G+ P + H++CMVDLLGRAG L+ A   I  +P
Sbjct: 496 IGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMP 555

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           ++P   +W  L AAC+ H ++++ ++++++++E+DP ++  YV LSNMYAE G   D   
Sbjct: 556 MQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVR 615

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            RK M+ + + K+PGCSWIE+ ++++ F  ++K H     ++  LK L +Q++  G+   
Sbjct: 616 VRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPE 675

Query: 706 EKEDRV 711
             +D +
Sbjct: 676 ADDDEI 681



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 219/465 (47%), Gaps = 43/465 (9%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V  +S + +L++      LS C+    L +G + HALI+K+    D ++ ++LV+MY+KC
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKC 199

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G +         M   +I S N L+  Y +N    +A   F+ +    V+P+  T ++++
Sbjct: 200 GVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVV 259

Query: 226 AICGSLSAIDEGKQLHAQTMKL-QYLSKTAVSNALLTMYIKCGMMEDAESVFE------- 277
           + C S SAI EG Q+HA+ +K  +Y +   + NAL+ MY KC  + +A  VF+       
Sbjct: 260 SACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNV 319

Query: 278 ------------------------GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
                                    ++++NV+SW A+I G+ Q+G+ E+ +RL  L++ +
Sbjct: 320 VSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD------FVGTAIVDMYSGL 367
            I P  YTF   L +CA+L +  +G   H Q++K G           FVG +++DMY   
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKC 439

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G + +     + M +    VSWNA I G+ +N     A+E F +M+ +    D  T   +
Sbjct: 440 GMVEDGCLVFERMVER-DVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGV 498

Query: 428 LKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAA 485
           L ACS    +    +  HS   +          + +++   + G  ++A  +   +    
Sbjct: 499 LSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQP 558

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           D V W S++ A   +G       + EK++   I P NS    +LS
Sbjct: 559 DNVVWGSLLAACKVHGNIELGKYVAEKLM--EIDPLNSGPYVLLS 601



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 37/322 (11%)

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +HG  +K +  +C +       +   F   L SC   ++       HA++IK   +   F
Sbjct: 3   RHGFVQKLVGELCFL-------DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIF 55

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEM------------------GK------------SAS 385
           +   +VD Y   G   +A+K    M                  GK               
Sbjct: 56  IQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPD 115

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
             SWNA ++GF ++ + EEA+  F  M   D   +E+++ S L AC+ L  L    QIH+
Sbjct: 116 QCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHA 175

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I KS++  +V++GS+L++ Y+KCG    A+R F  +   ++VSWNS+I  Y QNG A K
Sbjct: 176 LISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGK 235

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ +F  M+  G+ P   T  +V+SAC+    +++G ++   +VK      +    + +V
Sbjct: 236 ALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALV 295

Query: 566 DLLGRAGKLEIALIFISNLPIK 587
           D+  +  ++  A +    +P++
Sbjct: 296 DMYAKCRRVNEARLVFDRMPLR 317


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/636 (34%), Positives = 366/636 (57%), Gaps = 46/636 (7%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           + +T +S+E  +  + +I+V   C   +CL+  R+    + +     + F   SL+++  
Sbjct: 41  ILMTQFSMEIFIQNR-LIDVYGKC---DCLDDARKLFDRMPQR----NTFTWNSLISVLT 92

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +     +   MP  D  S N +++G+A++  F+++  +F+K+   D   N Y++ +
Sbjct: 93  KSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGS 152

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L+ C  L  ++ G Q+HA   K +Y +   + +AL+ MY KCG +  AE VF G+++RN
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +++W ++I  ++Q+G   + L +   M + G++P+E T    +++CASL     G   HA
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHA 272

Query: 344 QVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM---------------GKSAS-- 385
           +V+K      D V G A+VDMY+   ++ EA++    M                ++AS  
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 386 -------------SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
                         VSWNA IAG+ +N + EEA+  F  + R       +T+ ++L AC+
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACA 392

Query: 433 LLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            L  L    Q H+ ++K  F      ES++ VG+SLI+ Y KCGS ED  RVF ++   D
Sbjct: 393 NLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 452

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN++I  Y+QNG   +A+ +F KM+V G +P + T + VL ACSH+GLV++G+  F 
Sbjct: 453 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 512

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM +E+G++P + HY+CMVDLLGRAG L  A   I  +P+ P A +W  L AAC+ H ++
Sbjct: 513 SM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNI 571

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           +M +  ++++LE+DP ++  YV LSNMYAE G   D    RKLM+ + ++K+PGCSWIEV
Sbjct: 572 EMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEV 631

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F  ++KSH    ++Y  LK L +Q++ +G+
Sbjct: 632 ESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 667



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 197/399 (49%), Gaps = 64/399 (16%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN   ++ +L  C    +    + +HA+ +  Q+  +  + N L+ +Y KC  ++DA  +
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 276 FEGLVQRNVISWTAII-------------------------------NGFKQHGDYEKPL 304
           F+ + QRN  +W ++I                               +GF QH  +E+ L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
                M  +    NEY+F  AL++CA L + +MG   HA V K   +   ++G+A++DMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           S  G +  A++    M +  + V+WN+ I  + +N    EA+E F +M+ +    DE T 
Sbjct: 193 SKCGSVACAEEVFSGMIER-NLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERV----- 478
           +S++ AC+ L +L    QIH+R+VK+ KF  ++ +G++L++ Y KC    +A RV     
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 479 --------------------------FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
                                     FS++T  +VVSWN++I  Y+QNG   +A+ LF  
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +  E I PT+ TF  +LSAC++   +  G++    ++K+
Sbjct: 372 LKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQ 410



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           +VR+    +   ++ +L +C    S      +H+RI+ ++F   + + + LI+ Y KC  
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            +DA ++F ++   +  +WNS+I   +++G   +A  LF  M      P   ++ +++S 
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSG 121

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPE 557
            +     ++  + F  M +E  +L E
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNE 147


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 229/633 (36%), Positives = 363/633 (57%), Gaps = 22/633 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL   + +  +E G + H ++ K+ +    FV  S+VNMY+K   +    AV   M   +
Sbjct: 199 VLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRN 258

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+  N L  +AF  F ++    V+     ++T++ +C ++  +   KQLH 
Sbjct: 259 AVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHC 318

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---EGLVQRNVISWTAIINGFKQHGD 299
           Q +K        +  AL+  Y KC  ++DA  +F    G+  +NV+SWTAII+G+ Q+G 
Sbjct: 319 QVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV--QNVVSWTAIISGYVQNGR 376

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ + L C MR +G+ PN +T++  L + A++  S +    HA V+K        VGTA
Sbjct: 377 TDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQI----HALVVKTNYENSPSVGTA 432

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           + D YS +G+  EA K + E+      V+W+A ++G+ +    E A++ F Q+ +     
Sbjct: 433 LSDSYSKIGDANEAAK-IFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEP 491

Query: 420 DEFTYSSILKACSL-LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           +EFT+SS+L AC+    S+   +Q HS  +KS F + + V S+L+  Y K G+ E A  V
Sbjct: 492 NEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEV 551

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +    D+VSWNSMI  Y+Q+G  +K++ +FE+M  + +     TF+ V+SAC+H+GLV
Sbjct: 552 FKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLV 611

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +GQ+ F+ MVK+Y I+P   HYSCMVDL  RAG LE A+  I+ +P    A IWR L A
Sbjct: 612 NEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLA 671

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H ++++ E  +++++ L P D+A YV LSN+YA AG   +  + RKLM MK++ KE
Sbjct: 672 ACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKE 731

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG---------HTDNEKED 709
            G SWIEV NK + F + + SH +  ++Y KL++L  +++D G         H   E+  
Sbjct: 732 AGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHK 791

Query: 710 RVLY--HSERLAVGFGLISLPAKNKFECSRTLE 740
            V+   HSERLA+ FGLI+ P     +  + L 
Sbjct: 792 EVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 824



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 173/617 (28%), Positives = 294/617 (47%), Gaps = 58/617 (9%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEK-------GISRNGYSTRNDSFPDGFIDDGCSN 102
           QLF+++P++     + L+F    N + K       G+ R+G  T           DG S 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT-----------DGSS- 94

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECL---ELGRRYHALITKTAVCGDQFVTASLV 159
              ++C              VL  C    CL    +G++ H    K     D  V  SLV
Sbjct: 95  ---LSC--------------VLKVCG---CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLV 134

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           +MY K   ++    V  +M   ++ S   LLAGY +N L +QA   F ++    ++PN +
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T++ +L    +  A+++G Q+H   +K    S   V N+++ MY K  M+ DA++VF+ +
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RN +SW ++I GF  +G   +   L   MR +G+   +  F   +  CA+++      
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H QVIK G      + TA++  YS   EI +A K    M    + VSW A I+G+ +N
Sbjct: 315 QLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN 374

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKA-CSLLPSLATCEQIHSRIVKSKFESNVHV 458
            +T+ A+  F QM R     + FTYS+IL A  ++ PS     QIH+ +VK+ +E++  V
Sbjct: 375 GRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPS-----QIHALVVKTNYENSPSV 429

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           G++L ++Y+K G   +A ++F  +   D+V+W++M+  Y+Q G    A+ +F ++  EG+
Sbjct: 430 GTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGV 489

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA- 577
            P   TF +VL+AC+      +  K F S   + G        S +V +  + G +E A 
Sbjct: 490 EPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESAN 549

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHS----DLKMAEFISKQILELDPDDAAVYVTLSNM 633
            +F   +     +  W  + +    H      LK+ E +  + LEL   D   ++ + + 
Sbjct: 550 EVFKRQVDRDLVS--WNSMISGYAQHGCGKKSLKIFEEMRSKNLEL---DGITFIGVISA 604

Query: 634 YAEAGLQADAEEQRKLM 650
              AGL  + +    LM
Sbjct: 605 CTHAGLVNEGQRYFDLM 621


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/580 (34%), Positives = 347/580 (59%), Gaps = 1/580 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+    L++G + HA   K     D  V  + ++MYAKCG +     +   +P   
Sbjct: 283 VFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHS 342

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N ++ G  +N    +A  FF  L    +  N  + S   + C S+    +G+QLH+
Sbjct: 343 LQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K    S   V+N++L MY KC  + +A  +F+ + +R+ +SW A+I   +Q+G+ E+
Sbjct: 403 LSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEE 462

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M    ++P+++T+   L +C+S +  + G   H ++IK G+ L  FVG A++D
Sbjct: 463 TLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALID 522

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G I EAKK + +  +  + VSWNA IAGF   + +E+A   F +M++     D F
Sbjct: 523 MYCKCGMIEEAKK-IHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNF 581

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY+ +L AC+ L S+   +QIH +I+K +  S+V++ S+L++ Y+KCG+ +D+  VF + 
Sbjct: 582 TYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKA 641

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V+WN+MI  Y+Q+G   +A+  FE+M +E +RP ++TF+++L AC+H G +  G 
Sbjct: 642 PNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGL 701

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F +M+ EYG+ P+  HYSCM+D++GR+G++  AL  I  +P +  A IWR L + C+ 
Sbjct: 702 HYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKI 761

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  +  IL+L+P+D++  + LSN+YA+AG+     E RK+M+  ++ KEPGCS
Sbjct: 762 HGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCS 821

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           WIEV ++++ F   NK+H    ++Y+ L  L+ +++ IG+
Sbjct: 822 WIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGY 861



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 167/638 (26%), Positives = 295/638 (46%), Gaps = 39/638 (6%)

Query: 11  INTSSFTFPYPVVEQVKPKKCNHRKTVEVKEPFASYS-------ACQLFNKSPKRAGLST 63
           +  S   + Y V E     K + R  +      + Y+       A + F  +PKR  +S 
Sbjct: 89  LRCSHLNYAYKVFE-----KMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSW 143

Query: 64  SDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEV 123
           + ++          G  +NG   ++    D F+D G S  V           D+     V
Sbjct: 144 NSML---------SGFLQNGECRKS---IDVFLDMGRSEEVG---------FDQTTFAVV 182

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS  E   LG + H LI +     D    ++L++MYAKC  +   + +  ++P  + 
Sbjct: 183 LKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNW 242

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              + ++AG  +N         F ++  + +  +   Y+++   C  LSA+  G QLHA 
Sbjct: 243 VCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAH 302

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  + S   V  A L MY KCG + DA+ +F  L + ++  + AII G  ++    + 
Sbjct: 303 ALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEA 362

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L+   L+ + G+  NE + + A ++CAS++    G   H+  +K  +     V  +I+DM
Sbjct: 363 LQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDM 422

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y     + EA     EM +   +VSWNA IA   +N   EE +  F+ M+R     D+FT
Sbjct: 423 YGKCEALSEACCMFDEMERR-DAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFT 481

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y S+LKACS   +L +  +IH+RI+KS    +  VG +LI+ Y KCG  E+A+++  ++ 
Sbjct: 482 YGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIE 541

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
              +VSWN++I  ++    +  A   F +M+   ++P N T+  VL AC++   V  G++
Sbjct: 542 QQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ 601

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +   ++K   +  +    S +VD+  + G ++ + +     P K     W  +      H
Sbjct: 602 IHGQIIK-LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVT-WNAMICGYAQH 659

Query: 604 --SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
              +  +  F   Q+  + P+  A +V++    A  G 
Sbjct: 660 GLGEEALGYFERMQLENVRPNH-ATFVSILRACAHMGF 696



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 258/588 (43%), Gaps = 69/588 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  CS    L+ G++ HA +  +    D +++  L+ MY +C  +     V ++M   D
Sbjct: 49  IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRD 108

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP-------------------------- 216
           + S N +++GYA     + A  FF      DV                            
Sbjct: 109 VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGR 168

Query: 217 ------NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                 +  T++ +L  C  L     G Q+H   +++ +       +ALL MY KC  ++
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLD 228

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           D+  +F  +  +N + W+AII G  Q+ ++   L L   M++ GI  ++  +     SCA
Sbjct: 229 DSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCA 288

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L    +G   HA  +K        VGTA +DMY+  G + +A++    + K  S   +N
Sbjct: 289 GLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH-SLQCYN 347

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I G  RN+K  EA++ F  ++++    +E + S    AC+ +       Q+HS  VKS
Sbjct: 348 AIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKS 407

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              SN+ V +S+++ Y KC +  +A  +F ++   D VSWN++I A+ QNG   + + LF
Sbjct: 408 TLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLF 467

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M+   + P   T+ +VL ACS    +  G ++   ++K  G+  +      ++D+  +
Sbjct: 468 ASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKS-GLGLDSFVGGALIDMYCK 526

Query: 571 AGKLEIA----------------------------------LIFISNLPIKPTAPIWRPL 596
            G +E A                                     +  + +KP    +  +
Sbjct: 527 CGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIV 586

Query: 597 FAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADA 643
             AC   + + + + I  QI++L+   D  +  TL +MY++ G   D+
Sbjct: 587 LDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDS 634



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/466 (23%), Positives = 217/466 (46%), Gaps = 37/466 (7%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+S ++  C   +++  GKQ HA+ +   ++    +SN L+ MY++C  +  A  VFE +
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 280 VQRNVI-------------------------------SWTAIINGFKQHGDYEKPLRLVC 308
            QR+VI                               SW ++++GF Q+G+  K + +  
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 309 LM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
            M R + +  ++ TF V L +C+ L +  +G   H  +++ G       G+A++DMY+  
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
             + ++ K   E+    + V W+A IAG  +N +    +E F +M +      +  Y+S+
Sbjct: 225 KRLDDSLKIFSEI-PVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            ++C+ L +L    Q+H+  +K  F S++ VG++ ++ Y KCGS  DA+R+F+ L    +
Sbjct: 284 FRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSL 343

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
             +N++I    +N +  +A+  F+ ++  G+     +     SAC+      DG+++   
Sbjct: 344 QCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSL 403

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            VK   +       + ++D+ G+   L  A      +  +  A  W  + AA   + + +
Sbjct: 404 SVKS-TLRSNICVANSILDMYGKCEALSEACCMFDEME-RRDAVSWNAVIAAHEQNGNEE 461

Query: 608 --MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
             +  F S   L ++PD       L    ++  L +  E   +++K
Sbjct: 462 ETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 358/620 (57%), Gaps = 12/620 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +L+ C+    L+ G++ H+ + K  +  D     SL+++Y KCGDI++   +     
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +L  Y + +   ++F  F ++    + PN +TY  +L  C     I+ G+Q
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQ 367

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H+ ++K  + S   VS  L+ MY K G ++ A  + E L +R+V+SWT++I G+ QH  
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+ L     M++ G+ P+      A ++CA ++    G   HA+V   G A    +   
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +V++Y+  G   EA    +E+ +    ++WN  I+GF +++  ++A+  F +M +  A  
Sbjct: 488 LVNLYARCGRSEEAFSLFREI-EHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKY 546

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           + FT+ S + A + L  +   +Q+H R VK+   S   V ++LI  Y KCGS EDA+ +F
Sbjct: 547 NVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIF 606

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S+++  + VSWN++I + SQ+GR  +A+ LF++M  EG++P + TF+ VL+ACSH GLV+
Sbjct: 607 SEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVE 666

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G   F+SM   YG+ P   HY+C+VD+LGRAG+L+ A  F+  +PI   A IWR L +A
Sbjct: 667 EGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H ++++ E  +K +LEL+P D+A YV LSN YA  G  A+ ++ RK+MK + I KEP
Sbjct: 727 CKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEP 786

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKE 708
           G SWIEV N ++ FF  ++ H    ++Y+ L +L  ++  IG+              +K+
Sbjct: 787 GRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKD 846

Query: 709 DRVLYHSERLAVGFGLISLP 728
                HSE+LAV FGL++LP
Sbjct: 847 PTAFVHSEKLAVAFGLMTLP 866



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 243/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ +    GR  HA + K A C + FV  +L+ +Y   G  K    V   M + D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    + A   F ++    ++P+  T +++LA C S+  + +GKQLH+
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K           +LL +Y+KCG +E A  +F    + NV+ W  ++  + Q  D  K
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   M+  GI PN++T+   L +C       +G   H+  IK G     +V   ++D
Sbjct: 330 SFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A+K L EM +    VSW + IAG+ ++   EEA+  F +M       D  
Sbjct: 390 MYSKYGCLDKARKIL-EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNI 448

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S   AC+ + ++    QIH+R+  S + +++ + ++L+  Y +CG  E+A  +F ++
Sbjct: 449 GLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++WN +I  + Q+   ++A+++F KM   G +    TF++ +SA ++   ++ G+
Sbjct: 509 EHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGK 568

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           +V    VK  G   E    + ++ L G+ G +E A +  S + ++     W  +  +C  
Sbjct: 569 QVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQ 626

Query: 603 HS 604
           H 
Sbjct: 627 HG 628



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 230/458 (50%), Gaps = 8/458 (1%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+ + C   G R+      HA      +  D+ +   L+++YAK G +     V K++  
Sbjct: 47  CALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS 106

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA++ L  +AF  + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 107 RDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMI 166

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+T V NAL+ +Y+  G  + AE VF  ++  + +++  +I+G  Q G  
Sbjct: 167 HAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHG 226

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L++   M+  G+ P+  T    LA+CAS+ +   G   H+ ++K GM+       ++
Sbjct: 227 ECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSL 286

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G+I E    +  +G   + V WN  +  + +     ++ E F QM       +
Sbjct: 287 LDLYVKCGDI-ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  +K+ FES+++V   LI+ Y+K G  + A ++  
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+    +A+  F++M   G+ P N    +  SAC+    ++ 
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           G ++  + V   G   + + ++ +V+L  R G+ E A 
Sbjct: 466 GLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/714 (34%), Positives = 383/714 (53%), Gaps = 55/714 (7%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEK-------GISRNGYSTRNDSFPDGFIDDGCSN 102
           QLF+++P++     + L+F    N + K       G+ R+G  T           DG S 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPT-----------DGSS- 94

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECL---ELGRRYHALITKTAVCGDQFVTASLV 159
              ++C              VL  C    CL    +G++ H    K     D  V  SLV
Sbjct: 95  ---LSC--------------VLKVCG---CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLV 134

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           +MY K   ++    V  +M   ++ S   LLAGY +N L +QA   F ++    ++PN +
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T++ +L    +  A+++G Q+H   +K    S   V N+++ MY K  M+ DA++VF+ +
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RN +SW ++I GF  +G   +   L   MR +G+   +  F   +  CA+++      
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H QVIK G      + TA++  YS   EI +A K    M    + VSW A I+G+ +N
Sbjct: 315 QLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQN 374

Query: 400 QKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSL-LPSLATCEQIHSRIVKSKFESNVH 457
            +T+ A+  F QM R +    +EFT+SS+L AC+    S+   +Q HS  +KS F + + 
Sbjct: 375 GRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALC 434

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V S+L+  Y K G+ E A  VF +    D+VSWNSMI  Y+Q+G  +K++ +FE+M  + 
Sbjct: 435 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 494

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +     TF+ V+SAC+H+GLV +GQ+ F+ MVK+Y I+P   HYSCMVDL  RAG LE A
Sbjct: 495 LELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKA 554

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
           +  I+ +P    A IWR L AACR H ++++ E  +++++ L P D+A YV LSN+YA A
Sbjct: 555 MDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATA 614

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   +  + RKLM MK++ KE G SWIEV NK + F + + SH +  ++Y KL++L  ++
Sbjct: 615 GNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRL 674

Query: 698 EDIG---------HTDNEKEDRVLY--HSERLAVGFGLISLPAKNKFECSRTLE 740
           +D G         H   E+   V+   HSERLA+ FGLI+ P     +  + L 
Sbjct: 675 KDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 728


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/638 (35%), Positives = 352/638 (55%), Gaps = 12/638 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           + D    +EVL  C +++ L   ++ H  I K+ +  +  V  +L+++Y +CG ++    
Sbjct: 25  ITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARC 84

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   +     AS N ++AGY ++   + A   F ++    VQPN  TY  +L  C SLSA
Sbjct: 85  VFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSA 144

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  GK++HA        S   V  ALL MY KCG + +A  +F+ L+  ++ISWT +I  
Sbjct: 145 LKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGA 204

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q G+ ++  RL+  M ++G  PN  T+   L +CAS          H   +  G+ L 
Sbjct: 205 YAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELD 264

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             VGTA+V MY+  G I +A+     M K    VSWN  I  F  + +  EA + F QM 
Sbjct: 265 VRVGTALVQMYAKSGSIDDARVVFDRM-KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ 323

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 D   + SIL AC+   +L   ++IH   + S  E +V VG++L+  Y+K GS +
Sbjct: 324 TEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSID 383

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA  VF ++   +VVSWN+MI   +Q+G  + A+ +F +M   G++P   TF+AVLSACS
Sbjct: 384 DARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACS 443

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV +G+  + +M + YGI P+ +H +CMVDLLGRAG+L  A +FI N+ + P    W
Sbjct: 444 HAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATW 503

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  +CR + ++++ E ++K+ L+LDP +AA YV LSN+YAEAG        R +M+ +
Sbjct: 504 GALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRER 563

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-------- 705
            I KEPG SWIEV NKI+ F   + SH E  ++ E   +++++I+  G+  +        
Sbjct: 564 GIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGYIPDTRLVLKNK 623

Query: 706 ---EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              +KE  +  HSE+LA+ +GL+  P  N     + L 
Sbjct: 624 NMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLR 661



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 190/394 (48%), Gaps = 21/394 (5%)

Query: 306 LVCLMR--EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           +V LM   + G+  + + +   L  C   ++       H  +IK  M     V   ++ +
Sbjct: 13  IVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G + EA+     + K  S  SWNA IAG+  ++  E+A+  F +M       +  T
Sbjct: 73  YIECGRLQEARCVFDALVKK-SGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y  ILKAC+ L +L   +++H+ I     ES+V VG++L+  Y KCGS  +A R+F  L 
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D++SW  MI AY+Q+G  ++A  L  +M  EG +P   T++++L+AC+  G ++  ++
Sbjct: 192 NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKR 251

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           V    + + G+  +    + +V +  ++G ++ A +    + ++     W  +  A   H
Sbjct: 252 VHRHAL-DAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVS-WNVMIGAFAEH 309

Query: 604 SDLKMAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
                A   F+  Q     P DA +++++ N  A AG          L  +K+I +    
Sbjct: 310 GRGHEAYDLFLQMQTEGCKP-DAIMFLSILNACASAG---------ALEWVKKIHRHALD 359

Query: 662 SWIEVYNKI----YRFFSQNKSHSEMPKVYEKLK 691
           S +EV  ++       +S++ S  +   V++++K
Sbjct: 360 SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK 393



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EAI      ++     D F Y  +LK C     L   +Q+H  I+KS+ E N HV ++L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y +CG  ++A  VF  L      SWN+MI  Y ++  A  A+ LF +M  EG++P   
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           T++ +L AC+    ++ G++V  + ++  G+  +    + ++ + G+ G +  A     N
Sbjct: 131 TYMIILKACASLSALKWGKEV-HACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189

Query: 584 L----------------------------------PIKPTAPIWRPLFAACRCHSDLKMA 609
           L                                    KP A  +  +  AC     LK  
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249

Query: 610 EFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           + + +  L+   + D  V   L  MYA++G   DA      MK++++
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDV 296


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 356/620 (57%), Gaps = 12/620 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +L+ C+    L+ G++ H+ + K  +  D     SL+++Y KCGDI++   +     
Sbjct: 248 VASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGD 307

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +L  Y + +   ++F  F ++    + PN +TY  +L  C     I+ G+Q
Sbjct: 308 RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQ 367

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H+ ++K  + S   VS  L+ MY K   ++ A  + E L +R+V+SWT++I G+ QH  
Sbjct: 368 IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDF 427

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+ L     M++ G+ P+      A ++CA ++    G   HA+V   G A    +   
Sbjct: 428 CEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +V++Y+  G   EA    +E+      ++WN  I+GF +++  E+A+  F +M +  A  
Sbjct: 488 LVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKY 546

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           + FT+ S + A + L  +   +Q+H R VK+   S   V ++LI  Y KCGS EDA+ +F
Sbjct: 547 NVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIF 606

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S+++  + VSWN++I + SQ+GR  +A+ LF++M  EG++P + TF+ VL+ACSH GLV+
Sbjct: 607 SEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVE 666

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G   F+SM   YG+ P   HY+C+VD+LGRAG+L+ A  F+  +PI   A IWR L +A
Sbjct: 667 EGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSA 726

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H ++++ E  +K +LEL+P D+A YV LSN YA  G  A+ ++ RK+MK + I KEP
Sbjct: 727 CKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEP 786

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKE 708
           G SWIEV N ++ FF  ++ H    ++Y+ L +L  ++  IG+              +K+
Sbjct: 787 GRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKD 846

Query: 709 DRVLYHSERLAVGFGLISLP 728
                HSE+LAV FGL++LP
Sbjct: 847 PTAFVHSEKLAVAFGLMTLP 866



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 241/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ +    GR  HA + K A C + FV  +L+ +Y   G  K    V   M + D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    + A   F ++    ++P+  T +++LA C S+  + +GKQLH+
Sbjct: 210 RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHS 269

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K           +LL +Y+KCG +E A  +F    + NV+ W  ++  + Q  D  K
Sbjct: 270 YLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK 329

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   M+  GI PN++T+   L +C       +G   H+  IK G     +V   ++D
Sbjct: 330 SFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLID 389

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    + +A+K L EM +    VSW + IAG+ ++   EEA+  F +M       D  
Sbjct: 390 MYSKYRCLDKARKIL-EMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNI 448

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S   AC+ + ++    QIH+R+  S + +++ + ++L+  Y +CG  E+A  +F ++
Sbjct: 449 GLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++WN +I  + Q+    +A+++F KM   G +    TF++ +SA ++   ++ G+
Sbjct: 509 DHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGK 568

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           +V    VK  G   E    + ++ L G+ G +E A +  S + ++     W  +  +C  
Sbjct: 569 QVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQ 626

Query: 603 HS 604
           H 
Sbjct: 627 HG 628



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 228/458 (49%), Gaps = 8/458 (1%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+ + C   G R+      HA      +  D+ +   L+++YAK G +     V K++  
Sbjct: 47  CALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSS 106

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+  L  +AF  + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 107 RDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMI 166

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+T V NAL+ +Y+  G  + AE VF  ++  + +++  +I+G  Q G  
Sbjct: 167 HAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHG 226

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L++   M+  G+ P+  T    LA+CAS+ +   G   H+ ++K GM+       ++
Sbjct: 227 ECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSL 286

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G+I E    +  +G   + V WN  +  + +     ++ E F QM       +
Sbjct: 287 LDLYVKCGDI-ETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  +K+ FES+++V   LI+ Y+K    + A ++  
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE 405

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+    +A+  F++M   G+ P N    +  SAC+    ++ 
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           G ++  + V   G   + + ++ +V+L  R G+ E A 
Sbjct: 466 GLQI-HARVYVSGYAADISIWNTLVNLYARCGRSEEAF 502


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/607 (36%), Positives = 357/607 (58%), Gaps = 20/607 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H ++ K  +     V+ SL+N+Y KCG+++    +  +     + + N +++GYA 
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L  +A   F  +    V+ +  ++++++ +C +L  +   +QLH   +K  +L    +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332

Query: 256 SNALLTMYIKCGMMEDAESVFE--GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
             AL+  Y KC  M DA  +F+  G V  NV+SWTA+I+GF Q+   E+ + L   M+  
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+ PNE+T++V L +   +  S +    HAQV+K        VGTA++D Y  LG++ EA
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            K    +      V+W+A +AG+ +  +TE AI+ F ++ +     +EFT+SSIL  C+ 
Sbjct: 448 AKVFSGI-DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506

Query: 434 L-PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              S+   +Q H   +KS+ +S++ V S+L+  Y K G+ E AE VF +    D+VSWNS
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y+Q+G+A KA+ +F++M    ++    TF+ V +AC+H+GLV++G+K F+ MV++ 
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            I P + H SCMVDL  RAG+LE A+  I N+P    + IWR + AACR H   ++    
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +++I+ + P+D+A YV LSNMYAE+G   +  + RKLM  + + KEPG SWIEV NK Y 
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL-YHSERLAVG 721
           F + ++SH    ++Y KL+ L  +++D+G+           D+E ++ VL  HSERLA+ 
Sbjct: 747 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806

Query: 722 FGLISLP 728
           FGLI+ P
Sbjct: 807 FGLIATP 813



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 264/533 (49%), Gaps = 28/533 (5%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           Y+A  LF+KSP R   S   L+F         G SR+G +               +  + 
Sbjct: 44  YNAHNLFDKSPGRDRESYISLLF---------GFSRDGRTQE-------------AKRLF 81

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLEL-GRRYHALITKTAVCGDQFVTASLVNMYAK 164
           +  + L   +D      VL   S   C EL GR+ H    K     D  V  SLV+ Y K
Sbjct: 82  LNIHRLGMEMDCSIFSSVLK-VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 140

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
             + K    V  +M   ++ +   L++GYA+N++ D+  + F+++     QPN +T++  
Sbjct: 141 GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L +         G Q+H   +K        VSN+L+ +Y+KCG +  A  +F+    ++V
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W ++I+G+  +G   + L +   MR + +  +E +F   +  CA+L+        H  
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V+K G      + TA++  YS    + +A +  KE+G   + VSW A I+GF +N   EE
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ FS+M R     +EFTYS IL A   LP ++  E +H+++VK+ +E +  VG++L++
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLD 436

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           AY K G  E+A +VFS +   D+V+W++M+  Y+Q G    AI +F ++   GI+P   T
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           F ++L+ C+ +       K F     +  +       S ++ +  + G +E A
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/640 (33%), Positives = 366/640 (57%), Gaps = 13/640 (2%)

Query: 113 SLLDKQFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            ++  +F I + L+ C+  +  +LGR+ H L+ K  +  DQF   +LV+MY+K G+I+  
Sbjct: 178 GIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGA 237

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           VAV + + + D+ S N ++AG   +   D A     ++ G   +PN +T S+ L  C ++
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAM 297

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
              + G+QLH+  +K+   S    +  L+ MY KC MM+DA   ++ + ++++I+W A+I
Sbjct: 298 GFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALI 357

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+ Q GD+   + L   M  + ID N+ T +  L S ASL+   +    H   IK G+ 
Sbjct: 358 SGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY 417

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              +V  +++D Y     I EA K  +E       V++ + I  + +    EEA++ + Q
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEER-TWEDLVAYTSMITAYSQYGDGEEALKLYLQ 476

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M   D   D F  SS+L AC+ L +    +Q+H   +K  F  ++   +SL+  Y KCGS
Sbjct: 477 MQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGS 536

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            EDA+R FS++    +VSW++MI  Y+Q+G  ++A+ LF +M+ +G+ P + T ++VL A
Sbjct: 537 IEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCA 596

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C+H+GLV +G++ FE M   +GI P + HY+CM+DLLGR+GKL  A+  ++++P +    
Sbjct: 597 CNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGF 656

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L  A R H ++++ +  +K + +L+P+ +  +V L+N+YA AG+  +  + RK MK
Sbjct: 657 VWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMK 716

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE----------DIG 701
             ++ KEPG SWIE+ +K+Y F   ++SHS   ++Y KL QL   +           DI 
Sbjct: 717 DSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIH 776

Query: 702 HTDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           + D  +++++LY HSE+LAV FGLI+ P        + L 
Sbjct: 777 NVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLR 816



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 254/496 (51%), Gaps = 3/496 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS +  L +GR+ H +   T    D FV  +LV MYAKCG +     +   +   +
Sbjct: 88  VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERN 147

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L + Y ++ L  +A   F ++    + PN ++ S +L  C  L   D G+++H 
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+        +NAL+ MY K G +E A +VF+ +   +V+SW AII G   H   + 
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L+  M+  G  PN +T + AL +CA++    +G   H+ +IK       F    +VD
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    + +A++    M K    ++WNA I+G+ +     +A+  FS+M   D   ++ 
Sbjct: 328 MYSKCEMMDDARRAYDSMPKK-DIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T S++LK+ + L ++  C+QIH+  +KS   S+ +V +SL++ Y KC   ++A ++F + 
Sbjct: 387 TLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEER 446

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           T  D+V++ SMI AYSQ G   +A+ L+ +M    I+P      ++L+AC++    + G+
Sbjct: 447 TWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGK 506

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++    +K +G + +    + +V++  + G +E A    S +P +     W  +      
Sbjct: 507 QLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVS-WSAMIGGYAQ 564

Query: 603 HSDLKMAEFISKQILE 618
           H   K A  +  Q+L 
Sbjct: 565 HGHGKEALRLFNQMLR 580



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/559 (28%), Positives = 259/559 (46%), Gaps = 42/559 (7%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA + K     D  +   LV +Y+KC        +V +   LD+ S + LL+GY +N   
Sbjct: 4   HAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFV 63

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           ++A   F ++  + V+ N +T+ ++L  C     ++ G+++H   +   + S   V+N L
Sbjct: 64  EEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTL 123

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + MY KCG+++D+  +F G+V+RNV+SW A+ + + Q     + + L   M   GI PNE
Sbjct: 124 VVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNE 183

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           ++ ++ L +CA L+   +G   H  ++K G+ L  F   A+VDMYS  GEI  A    ++
Sbjct: 184 FSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQD 243

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +      VSWNA IAG   +   + A+    +M  +    + FT SS LKAC+ +     
Sbjct: 244 IAH-PDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+HS ++K    S++     L++ Y+KC   +DA R +  +   D+++WN++I  YSQ
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS----------------HSGLVQDGQK 543
            G    A+ LF KM  E I    +T   VL + +                 SG+  D   
Sbjct: 363 CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY- 421

Query: 544 VFESMVKEYG----------ILPEE-----AHYSCMVDLLGRAGKLEIAL---IFISNLP 585
           V  S++  YG          I  E        Y+ M+    + G  E AL   + + +  
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAE 644
           IKP   I   L  AC   S  +  + +    ++     D     +L NMYA+ G   DA+
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDAD 541

Query: 645 EQRKLMKMKEISKEPGCSW 663
                    EI      SW
Sbjct: 542 RA-----FSEIPNRGIVSW 555



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 199/410 (48%), Gaps = 18/410 (4%)

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           +LHA  +K  +    ++ N L+T+Y KC     A  + +   + +V+SW+++++G+ Q+G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             E+ L +   M   G+  NE+TF   L +C+  R+ +MG   H   +  G     FV  
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            +V MY+  G + ++++    + +  + VSWNA  + + +++   EA+  F +MVR+   
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVER-NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +EF+ S IL AC+ L       +IH  ++K   + +    ++L++ Y+K G  E A  V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  +   DVVSWN++I     +     A++L ++M   G RP   T  + L AC+  G  
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 539 QDGQKVFESMVKEYGILPEEAHYSC-----MVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           + G+++  S++K       +AH        +VD+  +   ++ A     ++P K     W
Sbjct: 301 ELGRQLHSSLIK------MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-W 353

Query: 594 RPLFAA-CRCHSDLKMAEFISKQILE-LDPDDAAVYVTLSNMYAEAGLQA 641
             L +   +C   L      SK   E +D +   +   L ++   A LQA
Sbjct: 354 NALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSV---ASLQA 400


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 204/566 (36%), Positives = 341/566 (60%), Gaps = 2/566 (0%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV-AVVKQMPYLDIASCNCLLAGYAKN 196
           + H    KT    D  +  + ++MY KC ++      +   +P  ++ S N ++ GYA++
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +A   F  L    +  +  + S     C  +    EG Q+H  +MK    S   V+
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVA 351

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NA+L MY KCG + +A  VFE +V R+ +SW AII   +Q+G+ EK L L   M + G++
Sbjct: 352 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 411

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+T+   L +CA  +  + G   H ++IK  M L  FVG A++DMYS  G + +A+K 
Sbjct: 412 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEK- 470

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L +     + VSWNA I+GF   +++EEA + FS+M+      D FTY++IL  C+ L +
Sbjct: 471 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 530

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           +   +QIH++I+K + +S+ ++ S+L++ Y+KCG+ +D + +F +    D V+WN+M+  
Sbjct: 531 VELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCG 590

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+Q+G   +A+ +FE M +E ++P ++TFLAVL AC H GLV+ G   F SM+  YG+ P
Sbjct: 591 YAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDP 650

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           +  HYSC+VD++GR+G++  AL  I  +P +  A IWR L + C+ H ++++AE  +  I
Sbjct: 651 QLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSI 710

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           L+L+P+D+A YV LSN+YA AG+  +  + RK+M+   + KEPGCSWIE+ ++++ F   
Sbjct: 711 LQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVG 770

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGH 702
           +K+H    ++YE L  L  +++ +G+
Sbjct: 771 DKAHPRSKEIYENLDVLTDEMKWVGY 796



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 187/373 (50%), Gaps = 3/373 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H L  K+    +  V  ++++MY KCG +     V ++M   D  S N ++A + +
Sbjct: 332 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 391

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   ++  S F+ +    ++P+ +TY ++L  C    A++ G ++H + +K +    + V
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFV 451

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             AL+ MY KCGMME AE + + L ++ V+SW AII+GF      E+  +    M E G+
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 511

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           DP+ +T+   L +CA+L    +G   HAQ+IK+ +    ++ + +VDMYS  G + +  +
Sbjct: 512 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF-Q 570

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
            + E   +   V+WNA + G+ ++   EEA++ F  M   +   +  T+ ++L+AC  + 
Sbjct: 571 LIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 630

Query: 436 SLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
            +       HS +     +  +   S +++   + G    A  +   +   AD V W ++
Sbjct: 631 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTL 690

Query: 494 IKAYSQNGRARKA 506
           +     +G    A
Sbjct: 691 LSXCKIHGNVEVA 703



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 141/571 (24%), Positives = 239/571 (41%), Gaps = 77/571 (13%)

Query: 103 TVPVTCYS--LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           T+P++ +S    +   K+    +   CS  + L  G++ HA +  T      FVT  L+ 
Sbjct: 26  TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA-------LFD----------QAF 203
           MY KC D+     V   MP  D  S N +L GYA          LFD          + F
Sbjct: 86  MYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELF 145

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
            F  ++  +    +  T++ +L  C SL     G Q+H   +K+ +       +ALL MY
Sbjct: 146 DF--RMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 203

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KC +  D                           D    L L   M++ G+        
Sbjct: 204 AKCCVQND---------------------------DLRGGLELFKEMQKAGVG------- 229

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
                             H   +K        +GTA +DMY     + +   QL     +
Sbjct: 230 --------------ALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN 275

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            +  S+NA I G+ R+ K  EA+  F  + ++    DE + S   +AC+++       Q+
Sbjct: 276 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV 335

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H   +KS  +SN+ V +++++ Y KCG+  +A  VF ++ + D VSWN++I A+ QNG  
Sbjct: 336 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 395

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
            K + LF  M+  G+ P   T+ +VL AC+    +  G ++   ++K    L      + 
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIA- 454

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL--DP 621
           ++D+  + G +E A      L  + T   W  + +        + A+    ++LE+  DP
Sbjct: 455 LIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513

Query: 622 DD---AAVYVTLSNMYA-EAGLQADAEEQRK 648
           D+   A +  T +N+   E G Q  A+  +K
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKK 544



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 149/278 (53%), Gaps = 11/278 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+  + L  G   H  I K+ +  D FV  +L++MY+KCG ++    +  ++    
Sbjct: 420 VLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 479

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++G++     ++A   F K+  + V P+++TY+T+L  C +L  ++ GKQ+HA
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q +K +  S   +S+ L+ MY KCG M+D + +FE    R+ ++W A++ G+ QHG  E+
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFV 356
            L++   M+ + + PN  TF   L +C      HMG      + FH+ +   G+      
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACG-----HMGLVEKGLHYFHSMLSNYGLDPQLEH 654

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            + +VD+    G++ +A + ++ M   A +V W   ++
Sbjct: 655 YSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/625 (34%), Positives = 348/625 (55%), Gaps = 13/625 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   I +L   +    L+ G+R H L  +  +  D  V  +LV M  +CGD+ S     
Sbjct: 228 DKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF 287

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K +   D+   N L+A  A++    +AF  + ++    V  N  TY ++L  C +  A++
Sbjct: 288 KGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H+   +  + S   + NAL++MY +CG +  A  +F  + +R++ISW AII G+ 
Sbjct: 348 AGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYA 407

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +  D  + +RL   M+ +G+ P   TF   L++CA+      G M H  +++ G+     
Sbjct: 408 RREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGH 467

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  A+++MY   G + EA+    E  ++   +SWN+ IAG  ++   E A + F +M   
Sbjct: 468 LANALMNMYRRCGSLMEAQNVF-EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNE 526

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   D  T++S+L  C    +L   +QIH RI +S  + +V++G++LI  Y +CGS +DA
Sbjct: 527 ELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDA 586

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN-STFLAVLSACSH 534
             VF  L   DV+SW +MI   +  G   KAI LF +M  EG RP + STF ++LSAC+H
Sbjct: 587 RNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNH 646

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV +G ++F SM  EYG+LP   HY C+V LLGRA + + A   I+ +P  P A +W 
Sbjct: 647 AGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWE 706

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L  ACR H ++ +AE  +   L+L+  + AVY+ LSN+YA AG   D  + R++M+ + 
Sbjct: 707 TLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRG 766

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--------- 705
           I KEPG SWIEV N I+ F + ++SH E  ++Y +LK+L  ++E+ G+  +         
Sbjct: 767 IRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLG 826

Query: 706 --EKEDRVLYHSERLAVGFGLISLP 728
              +E  +  HSERLA+ +GLI  P
Sbjct: 827 KAHQETSLCTHSERLAIAYGLIKTP 851



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 267/554 (48%), Gaps = 20/554 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +L  C+R+  L   +R HA + +  V  D F++  L+NMY KC  +     V 
Sbjct: 26  DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K+MP  D+ S N L++ YA+     +AF  F ++      PN  TY ++L  C S + ++
Sbjct: 86  KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK++H+Q +K  Y     V N+LL+MY KCG +  A  VF G+  R+V+S+  ++  + 
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q    ++ L L   M  +GI P++ T+   L +  +      G   H   ++ G+     
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGTA+V M    G++  AK+  K +      V +NA IA   ++    EA E + +M  +
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGIADR-DVVVYNALIAALAQHGHNVEAFEQYYRMRSD 324

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             A +  TY SIL ACS   +L   + IHS I +    S+V +G++LI  Y +CG    A
Sbjct: 325 GVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKA 384

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F  +   D++SWN++I  Y++     +A+ L+++M  EG++P   TFL +LSAC++S
Sbjct: 385 RELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS 444

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
               DG+ + E +++  GI       + ++++  R G L  A         +     W  
Sbjct: 445 SAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVIS-WNS 502

Query: 596 LFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTLS---------------NMYAEAG 638
           + A    H   + A   F   Q  EL+PD+      LS                   E+G
Sbjct: 503 MIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESG 562

Query: 639 LQADAEEQRKLMKM 652
           LQ D      L+ M
Sbjct: 563 LQLDVNLGNALINM 576



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 201/392 (51%), Gaps = 8/392 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++   + +L+ CS  + LE G+  H+ I++     D  +  +L++MYA+CGD+     +
Sbjct: 328 LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP  D+ S N ++AGYA+     +A   + ++    V+P   T+  +L+ C + SA 
Sbjct: 388 FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            +GK +H   ++    S   ++NAL+ MY +CG + +A++VFEG   R+VISW ++I G 
Sbjct: 448 ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGH 507

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            QHG YE   +L   M+ + ++P+  TF   L+ C +     +G   H ++ + G+ L  
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +G A+++MY   G + +A+     + +    +SW A I G     +  +AIE F QM +
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQM-Q 625

Query: 415 NDA--ACDEFTYSSILKACSLLPSLATCEQIHSRIVK--SKFESNVHVGSSLIEAYNKCG 470
           N+     D  T++SIL AC+    +    QI S +        +  H G  L+    +  
Sbjct: 626 NEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYG-CLVGLLGRAR 684

Query: 471 SWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
            +++AE + +Q+    D   W +++ A   +G
Sbjct: 685 RFQEAETLINQMPFPPDAAVWETLLGACRIHG 716


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/613 (34%), Positives = 342/613 (55%), Gaps = 11/613 (1%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C + + L  GR +H  + +T     +F+  S++ MY KCG +     V  +M   ++ S 
Sbjct: 20  CGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSW 79

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +++ YA+N +FD+ F  F  +  ++ +PN  TY   L    + S ++ GKQ+H+  ++
Sbjct: 80  NTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIR 139

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
               S  +V+ A+  MY+KCG +E AE VFE + ++N ++WT I+ G+ Q       L L
Sbjct: 140 SGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALAL 199

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G++ +EY F++ L +CA L   + G   H  ++K G+     VGT +VD Y  
Sbjct: 200 FAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVK 259

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              +  A K  + + +  + VSW+A I G+ +  + EEA++ F  +       + FTY+S
Sbjct: 260 CSNLESATKAFEWISE-PNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTS 318

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           I +ACS L    +  Q H+  +KS   +  H  S++I  Y++CG  + A RVF  +   D
Sbjct: 319 IFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPD 378

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+W ++I  Y+  G A +A+ LF +M   G+RP   TF+AVL+ACSHSGLV +G++  E
Sbjct: 379 AVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLE 438

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM   YG+     HY CMVD+  RAG L+ AL  I ++P  P A  W+ L   C  + +L
Sbjct: 439 SMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNL 498

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++ E  ++ + +LDP+D A Y+ + N+YA  G   +A   RK+M  + + KE  CSWI V
Sbjct: 499 EIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITV 558

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI----------EDIGHTDNEKEDRVLYHSE 716
             K++RF   +K H +  ++Y KL+ L   +          ED+ ++  E+++++L HSE
Sbjct: 559 KGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLVHSE 618

Query: 717 RLAVGFGLISLPA 729
           RLA+ FGLIS P+
Sbjct: 619 RLALAFGLISTPS 631



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 192/389 (49%), Gaps = 5/389 (1%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           GI V P   +Y  +   CG + ++ +G+  H Q  +        + N++L MY KCG + 
Sbjct: 5   GISVSPR--SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLA 62

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF+ + +RN++SW  II+ + ++G ++K   +   M E    PN  T+   L S  
Sbjct: 63  DARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLL 122

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +     +G   H+  I+ G+     V TAI +MY   G +  A+   ++M +  ++V+W 
Sbjct: 123 NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEK-NAVAWT 181

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             + G+ + ++  +A+  F++MV      DE+ +S +LKAC+ L  L    QIH  IVK 
Sbjct: 182 GIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKL 241

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             ES V VG+ L++ Y KC + E A + F  ++  + VSW+++I  Y Q G   +A+  F
Sbjct: 242 GLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTF 301

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E +    +   + T+ ++  ACS       G +     +K   ++  +   S M+ +  R
Sbjct: 302 ESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKS-SLVAYQHGESAMITMYSR 360

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+L+ A     ++   P A  W  + A 
Sbjct: 361 CGRLDYATRVFESID-DPDAVAWTAIIAG 388



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 151/313 (48%), Gaps = 14/313 (4%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+     VL  C+  E L  GR+ H  I K  +  +  V   LV+ Y KC +++S    
Sbjct: 210 LDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKA 269

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + +   +  S + L+ GY +   F++A   F  L    V  N +TY+++   C +L+  
Sbjct: 270 FEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADF 329

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G Q HA  +K   ++     +A++TMY +CG ++ A  VFE +   + ++WTAII G+
Sbjct: 330 NSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGY 389

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
              G+  + L+L   M++ G+ PN  TF   L +C     SH G +   +     M+   
Sbjct: 390 AYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTAC-----SHSGLVIEGRQYLESMSSNY 444

Query: 355 FVGTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG--FFRNQKTEE-A 405
            V T I      VD+YS  G + EA + ++ M  S  ++SW   + G   +RN +  E A
Sbjct: 445 GVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELA 504

Query: 406 IEAFSQMVRNDAA 418
            E   Q+   D A
Sbjct: 505 AENLFQLDPEDTA 517



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 2/268 (0%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M + GI  +  ++     +C  +++   G +FH Q+ +      +F+  +++ MY   G 
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A+K   EM +  + VSWN  I+ +  N   ++    FS M+  +   +  TY   L+
Sbjct: 61  LADARKVFDEM-RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +      L   +QIHS  ++S   SN  V +++   Y KCG  E AE VF +++  + V+
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W  ++  Y+Q  R   A+ LF KMV EG+      F  VL AC+    +  G+++   +V
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           K  G+  E +  + +VD   +   LE A
Sbjct: 240 K-LGLESEVSVGTPLVDFYVKCSNLESA 266


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/600 (35%), Positives = 345/600 (57%), Gaps = 5/600 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G+  HA +    +  +  +  +LV+MY KC  I+  V V K     D+     +++G
Sbjct: 232 LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISG 291

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + ++  F +A + F +++   V PN++TYS +L  C S+ A+D GKQ+H++ +     + 
Sbjct: 292 FTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEND 351

Query: 253 TAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            +V N+L+ MY+KC  M+EDA   F G+   NVISWT++I GF +HG  E+ +++   M+
Sbjct: 352 VSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQ 411

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G+ PN +T +  L +C ++++       H  +IK        VG A+VD Y+GLG + 
Sbjct: 412 GVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVD 471

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A   +  M K    +++ +      +    E A+   + M ++D   D F+ +S L A 
Sbjct: 472 DAW-HVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAA 530

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + +P + T +Q+H   VKS   S + V + L++ Y KCG   DA R F ++T  D VSWN
Sbjct: 531 AGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWN 590

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I   + NG    A+  FE M + G+ P   T L VL ACSH GLV  G   F+SM ++
Sbjct: 591 GLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREK 650

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           +GI P+  HY C+VDLLGRAG+LE A+  I  +P KP A I++ L  AC+ H ++ + E 
Sbjct: 651 HGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEH 710

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
           +++Q LELDP D A YV L+N+Y ++G     E+ R++M+ + + K PG SW+E  N ++
Sbjct: 711 MARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVH 770

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL-YHSERLAVGFGLISLPAK 730
            F + + SH ++ K++EK++ L+ Q  + G     +E+R L +HSE+LAV FGLIS P K
Sbjct: 771 LFTAGDTSHPQIGKIHEKIESLIAQFRNQGIW--YQENRALAHHSEKLAVAFGLISTPPK 828



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 229/427 (53%), Gaps = 4/427 (0%)

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           T   + S ++   + +++S+C+     + G   H+ I K     D F++ +L+++Y KC 
Sbjct: 6   TVSKIPSKIEYSLLKDIVSFCNSRSVRD-GICIHSPIIKMGFQEDMFLSNNLLSLYGKCF 64

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +     +  +MP  D+AS   L++ Y K    ++A   F  +      PN +T ST L 
Sbjct: 65  GVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALR 124

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C +L   + G +  A   K  + S   + +AL+  Y KCG  ++A  VFE +   +++S
Sbjct: 125 SCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVS 184

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WT +++ F + G + + L+L   M + G+ PNE+TF V L + +S    + G + HA ++
Sbjct: 185 WTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTF-VKLLAASSFLGLNYGKLVHAHLM 243

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
              + L   + TA+VDMY     I +A K + ++        W A I+GF ++ K  EAI
Sbjct: 244 MWRIELNLVLKTALVDMYCKCQSIEDAVK-VSKLTLEYDVFLWTAIISGFTQSLKFREAI 302

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            AF +M  +    + FTYS IL ACS + +L   +QIHSR+V +  E++V VG+SL++ Y
Sbjct: 303 TAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMY 362

Query: 467 NKCGSW-EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
            KC +  EDA R F  + + +V+SW S+I  +S++G   ++I +F  M   G+RP + T 
Sbjct: 363 MKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTL 422

Query: 526 LAVLSAC 532
             +L AC
Sbjct: 423 STILGAC 429



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 249/510 (48%), Gaps = 7/510 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS       G R+ AL+TK+    +  + ++L++ Y+KCG  +    V + M   DI
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   +++ + +   + QA   + ++    V PN +T+  +LA   S   ++ GK +HA 
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLA-ASSFLGLNYGKLVHAH 241

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            M  +      +  AL+ MY KC  +EDA  V +  ++ +V  WTAII+GF Q   + + 
Sbjct: 242 LMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREA 301

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           +     M   G+ PN +T++  L +C+S+    +G   H++V+  G+     VG ++VDM
Sbjct: 302 ITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDM 361

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y     + E   +      S + +SW + IAGF  +   EE+I+ F  M       + FT
Sbjct: 362 YMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFT 421

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            S+IL AC  + SL    ++H  I+K+  +++V VG++L++AY   G  +DA  V S + 
Sbjct: 422 LSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMK 481

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             DV+++ S+    +Q G    A+ +   M  + +R    +  + LSA +   +++ G++
Sbjct: 482 HRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQ 541

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI-KPTAPIWRPLF--AAC 600
           +    VK  G+    +  + +VDL G+ G +  A    S L I +P A  W  L    A 
Sbjct: 542 LHCYSVKS-GLGSWISVSNGLVDLYGKCGCIHDA--HRSFLEITEPDAVSWNGLIFGLAS 598

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTL 630
             H    ++ F   ++  ++PD     + L
Sbjct: 599 NGHVSSALSAFEDMRLAGVEPDQITCLLVL 628



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 231/478 (48%), Gaps = 41/478 (8%)

Query: 216 PNHYTYSTM---LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           P+   YS +   ++ C S S  D G  +H+  +K+ +     +SN LL++Y KC  + +A
Sbjct: 11  PSKIEYSLLKDIVSFCNSRSVRD-GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA 69

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             +F+ +  R+V SWT +++ + + G++E+ L L   M   G  PNE+T + AL SC++L
Sbjct: 70  RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
           R  + G  F A V K G      +G+A++D YS  G   EA +  + M  +   VSW   
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM-NNGDIVSWTMM 188

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           ++ F       +A++ + +M++   A +EFT+  +L A S L  L   + +H+ ++  + 
Sbjct: 189 VSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRI 247

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E N+ + ++L++ Y KC S EDA +V       DV  W ++I  ++Q+ + R+AI  F +
Sbjct: 248 ELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHE 307

Query: 513 MVVEGIRPTNSTFLAVLSACS-----------HSGLVQDGQK----VFESMVKEY----- 552
           M   G+ P N T+  +L+ACS           HS +V  G +    V  S+V  Y     
Sbjct: 308 METSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSN 367

Query: 553 ----------GIL-PEEAHYSCMVDLLGRAGKLEIAL-IF--ISNLPIKPTAPIWRPLFA 598
                     GI  P    ++ ++      G  E ++ +F  +  + ++P +     +  
Sbjct: 368 MIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILG 427

Query: 599 ACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           AC     L     +   I++ + D D  V   L + YA  G+  DA     +MK +++
Sbjct: 428 ACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDV 485



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 117/261 (44%), Gaps = 5/261 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   + L   R+ H  I K     D  V  +LV+ YA  G +     V   M + D
Sbjct: 425 ILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRD 484

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   L     +    + A +    ++  DV+ + ++ ++ L+    +  ++ GKQLH 
Sbjct: 485 VITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHC 544

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K    S  +VSN L+ +Y KCG + DA   F  + + + +SW  +I G   +G    
Sbjct: 545 YSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSS 604

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGM--ALGDFVGTA 359
            L     MR  G++P++ T  + L +C+      MG   F +   K G+   L  +V   
Sbjct: 605 ALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYV--C 662

Query: 360 IVDMYSGLGEIWEAKKQLKEM 380
           +VD+    G + EA   ++ M
Sbjct: 663 LVDLLGRAGRLEEAMNVIETM 683


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/625 (34%), Positives = 360/625 (57%), Gaps = 12/625 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  +L+ CS    L  G++ H+ + K  +  D  +  SL+++Y K GDI+  + + 
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                 ++   N +L  Y +     ++F  F ++    V+PN +TY  ML  C     I 
Sbjct: 303 DSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIG 362

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+Q+H+ T+K  + S   VS  L+ MY K G ++ A+ + + + +++V+SWT++I G+ 
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH   ++ L     M+  GI P+      A+++CA ++  H G   HA+V   G +    
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVS 482

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +   +V +Y+  G   EA    + + +    ++WN  I+GF ++   EEA++ F +M + 
Sbjct: 483 IWNGLVYLYARCGISKEAFSSFEAI-EHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA 541

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
            A  + FT+ S + A + L  +   +QIH+R++K+ + S   + ++LI  Y KCGS EDA
Sbjct: 542 GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDA 601

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +  F ++T  + VSWN++I   SQ+GR  +A+ LF++M  +G++P++ TF+ VL+ACSH 
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHV 661

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV++G   F+SM  E+GI P   HY+C+VD+LGRAG+L+ A  F+  +PI   + +WR 
Sbjct: 662 GLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRT 721

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +AC+ H +L++ EF +K +LEL+P D+A YV LSN YA  G  A  ++ RK+MK + +
Sbjct: 722 LLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGV 781

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEK 707
            KEPG SWIEV N ++ FF  ++ H    ++Y  L  L  ++  IG+         + EK
Sbjct: 782 RKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEK 841

Query: 708 EDR---VLYHSERLAVGFGLISLPA 729
           E +      HSE+LAV FGL+SLP+
Sbjct: 842 EGKDPTAFVHSEKLAVAFGLMSLPS 866



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 243/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C++ E  +LGR  H  + K     + FV  +L+++Y +C   +    V   M Y D
Sbjct: 149 ILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+    D+A   F ++    + P+  T +++LA C ++  + +GKQLH+
Sbjct: 209 SVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHS 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        +  +LL +Y+K G +E+A  +F+   + NV+ W  ++  + Q  D  K
Sbjct: 269 YLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAK 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   M   G+ PN++T+   L +C       +G   H+  IK G     +V   ++D
Sbjct: 329 SFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLID 388

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A++ L +M +    VSW + IAG+ +++  +EA+E F +M       D  
Sbjct: 389 MYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNI 447

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S + AC+ + ++    QIH+R+  S + ++V + + L+  Y +CG  ++A   F  +
Sbjct: 448 GLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAI 507

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + ++WN +I  ++Q+G   +A+ +F KM   G +    TF++ +SA ++   ++ G+
Sbjct: 508 EHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGK 567

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   ++K  G   E    + ++ L G+ G +E A +    +  K     W  +   C  
Sbjct: 568 QIHARVIKT-GYTSETEISNALISLYGKCGSIEDAKMDFFEMT-KRNEVSWNTIITCCSQ 625

Query: 603 HS 604
           H 
Sbjct: 626 HG 627



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 233/452 (51%), Gaps = 8/452 (1%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+   C   GRR+      HA      + G + +   L+++YAK G ++    V +++  
Sbjct: 46  CALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSV 105

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+N L ++A   + ++    V P  Y  S++L+ C        G+ +
Sbjct: 106 RDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLI 165

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q  K  + S+T V NAL+++Y++C     A+ VF  ++  + +++  +I+G  Q G  
Sbjct: 166 HVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHG 225

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ L +   M+  G+ P+  T    LA+C+++ +   G   H+ ++K GM+L   +  ++
Sbjct: 226 DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSL 285

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G+I EA  Q+ + G   + V WN  +  + +     ++ + F +M+      +
Sbjct: 286 LDLYVKSGDIEEA-LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  +L+ C+    +   EQIHS  +K+ F+S+++V   LI+ Y+K G  + A+R+  
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   DVVSW SMI  Y Q+   ++A+  F++M   GI P N    + +SAC+    V  
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           G ++  + V   G   + + ++ +V L  R G
Sbjct: 465 GSQI-HARVYVSGYSADVSIWNGLVYLYARCG 495



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 19/273 (6%)

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS-------LLPSL 437
            + S+N  +AGF      E+ +  F+   R         ++  L+AC        L+P  
Sbjct: 5   GAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVP-- 62

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               +IH++ +         +G+ LI+ Y K G    A RVF +L+  D VSW +++  Y
Sbjct: 63  ----EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGY 118

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +QNG   +A+ L+ +M   G+ PT     ++LSAC+ + L Q G+ +   + K+ G   E
Sbjct: 119 AQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQ-GFFSE 177

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQI 616
               + ++ L  R     +A     ++    +      +    +C H D  +  F   Q+
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQL 237

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             L PD     VT++++ A      D  + ++L
Sbjct: 238 SGLSPDS----VTIASLLAACSAVGDLRKGKQL 266


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/606 (36%), Positives = 357/606 (58%), Gaps = 18/606 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H ++ K  +     V+ SL+N+Y KCG+++    +  +     + + N +++GYA 
Sbjct: 217 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 276

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L  +A   F  +    V+ +  ++++++ +C +L  +   +QLH   +K  ++    +
Sbjct: 277 NGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNI 336

Query: 256 SNALLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
             AL+  Y KC  M DA  +F E     NV+SWTA+I+GF Q+   E+ + L   M+  G
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + PNE+T++V L +   +  S +    HAQV+K        VGTA++D Y  LG++ EA 
Sbjct: 397 VRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAA 452

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS-L 433
           K    +  +   V+W+A +AG+ +  +TE AI+ FS++ +     +EFT+SSIL  C+  
Sbjct: 453 KVFSGI-DNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAAT 511

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             S+   +Q H   +KS+ +S++ V S+L+  Y K G  E AE VF +    D+VSWNSM
Sbjct: 512 TASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSM 571

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+Q+G+A KA+ +F++M    ++  + TF+ V +AC+H+GLV++G+K F+ MV++  
Sbjct: 572 ISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 631

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P + H SCMVDL  RAG+LE A+  I N+P    + IWR + AACR H   ++    +
Sbjct: 632 IAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAA 691

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           ++I+ + P+D+A YV LSNMYAE+G   +  + RKLM  + + KEPG SWIEV NK Y F
Sbjct: 692 EKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAF 751

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL-YHSERLAVGF 722
            + ++SH    ++Y KL+ L  +++D+G+           D+E ++ VL  HSERLA+ F
Sbjct: 752 LAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAF 811

Query: 723 GLISLP 728
           GLI+ P
Sbjct: 812 GLIATP 817



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 246/489 (50%), Gaps = 28/489 (5%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           Y A  LF+KSP R   S + L+F         G SR+G +             G    + 
Sbjct: 48  YYAHNLFDKSPDRDRESYTSLLF---------GFSRDGRTQEATRLFLNIQHLG----ME 94

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLEL-GRRYHALITKTAVCGDQFVTASLVNMYAK 164
           + C    S+L            S   C EL GR+ H    K     D  V  SLV+ Y K
Sbjct: 95  MDCSIFSSVLK----------VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 144

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
             + K    V  +M   ++ +   L++GYA+N+L ++  + F+++     QPN +T++  
Sbjct: 145 GSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAA 204

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L +         G Q+H   +K        VSN+L+ +Y+KCG +  A  +F+    ++V
Sbjct: 205 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 264

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W ++I+G+  +G   + L +   MR + +  +E +F   +  CA+L+        H  
Sbjct: 265 VTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCS 324

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V+K G      + TA++  YS    + +A +  KE G   + VSW A I+GF +N   EE
Sbjct: 325 VVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEE 384

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+  FS+M R     +EFTYS IL A   LP ++  E +H+++VK+ +E +  VG++L++
Sbjct: 385 AVGLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLD 440

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           AY K G  ++A +VFS +   D+V+W++M+  Y+Q G    AI +F ++   G++P   T
Sbjct: 441 AYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFT 500

Query: 525 FLAVLSACS 533
           F ++L+ C+
Sbjct: 501 FSSILNVCA 509


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/640 (35%), Positives = 363/640 (56%), Gaps = 26/640 (4%)

Query: 119  FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS--LVNMYAKCGDIKSMVAVVK 176
            FV+ +L+  +   CLELG++ H ++ ++ +  DQ V+    L+NMY K G +    +V  
Sbjct: 938  FVV-MLTVVAGLNCLELGKQIHGIVMRSGL--DQVVSVGNCLINMYVKAGSVSRARSVFG 994

Query: 177  QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            QM  +D+ S N +++G   + L + +   F+ L    + P+ +T +++L  C SL    E
Sbjct: 995  QMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSL----E 1050

Query: 237  G-----KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            G      Q+HA  MK   +  + VS AL+ +Y K G ME+AE +F      ++ SW AI+
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 292  NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            +G+   GD+ K LRL  LM+E G   ++ T   A  +   L     G   HA V+KRG  
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFN 1170

Query: 352  LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
            L  FV + ++DMY   GE+  A++   E+  S   V+W   I+G   N + E A+  + Q
Sbjct: 1171 LDLFVTSGVLDMYLKCGEMESARRVFSEI-PSPDDVAWTTMISGCVENGQEEHALFTYHQ 1229

Query: 412  MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
            M  +    DE+T+++++KACSLL +L    QIH+ IVK     +  V +SL++ Y KCG+
Sbjct: 1230 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGN 1289

Query: 472  WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             EDA  +F +     + SWN+MI   +Q+G A++A+  F+ M   G+ P   TF+ VLSA
Sbjct: 1290 IEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSA 1349

Query: 532  CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            CSHSGLV +  + F SM K YGI PE  HYSC+VD L RAG++E A   IS++P + +A 
Sbjct: 1350 CSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASAS 1409

Query: 592  IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            ++R L  ACR   D +  + +++++L L+P D+A YV LSN+YA A    +    R +M+
Sbjct: 1410 MYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMR 1469

Query: 652  MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------T 703
               + K+PG SW+++ NK++ F + ++SH E   +Y K++ +M++I + G+         
Sbjct: 1470 KVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDTDFALV 1529

Query: 704  DNEKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            D E+ED+   + YHSE+LA+ +GL+  P        + L 
Sbjct: 1530 DVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLR 1569



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 206/429 (48%), Gaps = 4/429 (0%)

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            D+   N  L+ + +     +A   F+ +    V  +  T+  ML +   L+ ++ GKQ+H
Sbjct: 899  DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
               M+       +V N L+ MY+K G +  A SVF  + + ++ISW  +I+G    G  E
Sbjct: 959  GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018

Query: 302  KPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAI 360
              + +   +  D + P+++T    L +C+SL    ++    HA  +K G+ L  FV TA+
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078

Query: 361  VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            +D+YS  G++ EA+             SWNA + G+  +    +A+  +  M  +    D
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQ-DGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137

Query: 421  EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            + T  +  KA   L  L   +QIH+ +VK  F  ++ V S +++ Y KCG  E A RVFS
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFS 1197

Query: 481  QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            ++ + D V+W +MI    +NG+   A+  + +M +  ++P   TF  ++ ACS    ++ 
Sbjct: 1198 EIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQ 1257

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            G+++  ++VK      +    + +VD+  + G +E A         +  A  W  +    
Sbjct: 1258 GRQIHANIVK-LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIAS-WNAMIVGL 1315

Query: 601  RCHSDLKMA 609
              H + K A
Sbjct: 1316 AQHGNAKEA 1324



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 198/455 (43%), Gaps = 33/455 (7%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLL 190
            L LG+R HA I  +    D+FVT +L+ MYAKCG + S   +    P    D+ + N +L
Sbjct: 672  LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731

Query: 191  AGYAKNA-LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
            +  A +A      F  F  L    V    +T + +  +C   ++    + LH   +K+  
Sbjct: 732  SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791

Query: 250  LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                 V+ AL+ +Y K G++ +A  +F+G+  R+V+ W  ++  +       + + L   
Sbjct: 792  QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSE 851

Query: 310  MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
                G  P++ T           +N      F A   K             + MY   G 
Sbjct: 852  FHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK-------------LFMYDDDG- 897

Query: 370  IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
                          +  + WN  ++ F +  +  EA++ F  M+ +  ACD  T+  +L 
Sbjct: 898  --------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLT 943

Query: 430  ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
              + L  L   +QIH  +++S  +  V VG+ LI  Y K GS   A  VF Q+   D++S
Sbjct: 944  VVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLIS 1003

Query: 490  WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH-SGLVQDGQKVFESM 548
            WN+MI   + +G    ++ +F  ++ + + P   T  +VL ACS   G      ++    
Sbjct: 1004 WNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACA 1063

Query: 549  VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
            +K  G++ +    + ++D+  + GK+E A     N
Sbjct: 1064 MKA-GVVLDSFVSTALIDVYSKRGKMEEAEFLFVN 1097



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 213/491 (43%), Gaps = 41/491 (8%)

Query: 140  HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
            H    K  +  D FV  +LVN+YAK G I+    +   M   D+   N ++  Y    L 
Sbjct: 783  HGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLE 842

Query: 200  DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             +A   F +      +P+  T  T+  +      I E KQ  A   K             
Sbjct: 843  YEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATK------------- 889

Query: 260  LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
            L MY   G               +VI W   ++ F Q G+  + +     M    +  + 
Sbjct: 890  LFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDG 935

Query: 320  YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             TF V L   A L    +G   H  V++ G+     VG  +++MY   G +  A+    +
Sbjct: 936  LTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQ 995

Query: 380  MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS--- 436
            M +    +SWN  I+G   +   E ++  F  ++R+    D+FT +S+L+ACS L     
Sbjct: 996  MNE-VDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054

Query: 437  LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
            LAT  QIH+  +K+    +  V ++LI+ Y+K G  E+AE +F      D+ SWN+++  
Sbjct: 1055 LAT--QIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHG 1112

Query: 497  YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV--QDGQKVFESMVKEYGI 554
            Y  +G   KA+ L+  M   G R    T   V +A +  GLV  + G+++   +VK  G 
Sbjct: 1113 YIVSGDFPKALRLYILMQESGERSDQITL--VNAAKAAGGLVGLKQGKQIHAVVVKR-GF 1169

Query: 555  LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
              +    S ++D+  + G++E A    S +P  P    W  + + C  +   + A F   
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEEHALFTYH 1228

Query: 615  QIL--ELDPDD 623
            Q+   ++ PD+
Sbjct: 1229 QMRLSKVQPDE 1239



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--T 483
           SIL+       L+  ++ H+RI+ S    +  V ++LI  Y KCGS   A ++F     T
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 484 AADVVSWNSMIKAYSQNG-RARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             D+V+WN+++ A + +  ++     LF  +    +  T  T   V   C
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMC 770


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/631 (35%), Positives = 357/631 (56%), Gaps = 22/631 (3%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   ++ +LS     + L+LG + HAL+ K++      V+ SL+NMY+K G + +     
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
               P LD+ S N +++ YA+N L  +A   F  L    ++P+ +T +++L  C   S  D
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC---STGD 1009

Query: 236  EGK------QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            EG+      Q+H   +K   ++ + VS AL+ +Y K G M++AE +  G    ++ SW A
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 290  IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            I+ G+ +     K L    LM E GI  +E T   A+ +   L N   G    A  IK G
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG 1129

Query: 350  MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 +V + ++DMY   G++  A +   E+ +    V+W   I+G+  N   + A+  +
Sbjct: 1130 FNNDLWVSSGVLDMYIKCGDMPNALELFGEISR-PDEVAWTTMISGYIENGDEDHALSVY 1188

Query: 410  SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
              M  +    DE+T+++++KA S L +L   +QIH+ +VK  +  +  VG+SL++ Y KC
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248

Query: 470  GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            GS +DA RVF ++    VV WN+M+   +Q+G   +A+ LF  M   GI+P   TF+ VL
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 530  SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            SACSHSGL  +  K F++M K YGI PE  HYSC+VD LGRAG+++ A   I+++P K +
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368

Query: 590  APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            A ++R L  ACR   D + A+ ++ ++L LDP D++ YV LSN+YA +    D  + R +
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428

Query: 650  MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----HTD- 704
            MK+K + K+PG SWI+V NK++ F   ++SH +   +YEK++ LM++I + G     TD 
Sbjct: 1429 MKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDF 1488

Query: 705  -------NEKEDRVLYHSERLAVGFGLISLP 728
                    EKE  + YHSE+LA+ FGLIS P
Sbjct: 1489 TLLDVEEEEKERALYYHSEKLAIAFGLISTP 1519



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 205/458 (44%), Gaps = 45/458 (9%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            L+LG+R HA I  +    D+++T +L+ MY+KCG + S   V  +    D+ + N +LA 
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 193  YAK-------NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
            YA+       N L  + F  F  L          T + +L +C     +   + +H   +
Sbjct: 687  YAQFADSSYENVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 246  KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
            K+ +     VS AL+ +Y K G++  A  +F+ + +R+ + W  ++  + ++   ++ LR
Sbjct: 745  KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 306  LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
                    G  P+       +    S  +++     HA+ +K   A+  F          
Sbjct: 805  FFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKR--HAEQVK-AYAMKMF---------- 851

Query: 366  GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
                            + ++  +WN ++  F    +   AI+ F  ++R+    D  T  
Sbjct: 852  -------------PFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 426  SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
             IL A      L   EQIH+ ++KS F   V V +SL+  Y+K G    AE+ F      
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958

Query: 486  DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
            D++SWN+MI +Y+QN    +AI  F  ++ +G++P   T  +VL ACS      D  + F
Sbjct: 959  DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYF 1014

Query: 546  E--SMVKEY----GILPEEAHYSCMVDLLGRAGKLEIA 577
               S V  Y    GI+ +    + ++DL  + GK++ A
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 126/564 (22%), Positives = 230/564 (40%), Gaps = 71/564 (12%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            +++    H    K     D FV+ +LVN+Y K G +     +  +MP  D    N +L  
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 193  YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAIDEGKQLHAQTMKLQYLS 251
            Y +N+  D+A  FF         P+   +S +  + G + S +   ++ HA+ +K     
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFXPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKAY--- 846

Query: 252  KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
                                A  +F      N+ +W   +  F   G     +     + 
Sbjct: 847  --------------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886

Query: 312  EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
               I  +  T  + L++     +  +G   HA VIK   A    V  ++++MYS  G ++
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
             A+K           +SWN  I+ + +N    EAI  F  ++R+    D+FT +S+L+AC
Sbjct: 947  AAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005

Query: 432  SLLPS---LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            S            Q+H   +K    ++  V ++LI+ Y+K G  ++AE +       D+ 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 489  SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL---VQDGQKVF 545
            SWN+++  Y ++ ++RKA+  F  M   GI P +   LA  +A   SG    ++ G+++ 
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGI-PIDEITLA--TAIKASGCLINLKQGKQIQ 1122

Query: 546  ESMVK---------EYGIL---------------------PEEAHYSCMVDLLGRAGKLE 575
               +K           G+L                     P+E  ++ M+      G  +
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182

Query: 576  IALIFISNLPIKPTAP---IWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLS 631
             AL     + +    P    +  L  A  C + L+  + I   +++LD   D  V  +L 
Sbjct: 1183 HALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLV 1242

Query: 632  NMYAEAGLQADAEEQRKLMKMKEI 655
            +MY + G   DA    + M ++++
Sbjct: 1243 DMYCKCGSVQDAYRVFRKMDVRKV 1266



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 8/232 (3%)

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           S  ++ +  +G   HA+++  G     ++   ++ MYS  G +  A+ Q+ +       V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSAR-QVFDKSSDRDLV 678

Query: 388 SWNAQIAGF--FRNQKTEEAIEAFS--QMVRNDA-ACDEFTYSSILKACSLLPSLATCEQ 442
           +WN+ +A +  F +   E  +E F    ++R    +    T + +LK C L   +   E 
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H   VK  FE ++ V  +L+  Y K G    A  +F ++   D V WN M+KAY +N  
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             +A+  F      G  P  S    V+   +    V + +K     VK Y +
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSD--VSNNRKRHAEQVKAYAM 848


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/631 (35%), Positives = 357/631 (56%), Gaps = 22/631 (3%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   ++ +LS     + L+LG + HAL+ K++      V+ SL+NMY+K G + +     
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTF 952

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
               P LD+ S N +++ YA+N L  +A   F  L    ++P+ +T +++L  C   S  D
Sbjct: 953  INSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC---STGD 1009

Query: 236  EGK------QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            EG+      Q+H   +K   ++ + VS AL+ +Y K G M++AE +  G    ++ SW A
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 290  IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            I+ G+ +     K L    LM E GI  +E T   A+ +   L N   G    A  IK G
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG 1129

Query: 350  MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 +V + ++DMY   G++  A +   E+ +    V+W   I+G+  N   + A+  +
Sbjct: 1130 FNNDLWVSSGVLDMYIKCGDMPNALELFGEISR-PDEVAWTTMISGYIENGDEDHALSVY 1188

Query: 410  SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
              M  +    DE+T+++++KA S L +L   +QIH+ +VK  +  +  VG+SL++ Y KC
Sbjct: 1189 HLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKC 1248

Query: 470  GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            GS +DA RVF ++    VV WN+M+   +Q+G   +A+ LF  M   GI+P   TF+ VL
Sbjct: 1249 GSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 530  SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            SACSHSGL  +  K F++M K YGI PE  HYSC+VD LGRAG+++ A   I+++P K +
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368

Query: 590  APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            A ++R L  ACR   D + A+ ++ ++L LDP D++ YV LSN+YA +    D  + R +
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNM 1428

Query: 650  MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----HTD- 704
            MK+K + K+PG SWI+V NK++ F   ++SH +   +YEK++ LM++I + G     TD 
Sbjct: 1429 MKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDF 1488

Query: 705  -------NEKEDRVLYHSERLAVGFGLISLP 728
                    EKE  + YHSE+LA+ FGLIS P
Sbjct: 1489 TLLDVEEEEKERALYYHSEKLAIAFGLISTP 1519



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 205/458 (44%), Gaps = 45/458 (9%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            L+LG+R HA I  +    D+++T +L+ MY+KCG + S   V  +    D+ + N +LA 
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 193  YAK-------NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
            YA+       N L  + F  F  L          T + +L +C     +   + +H   +
Sbjct: 687  YAQFADSSYENVL--EGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744

Query: 246  KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
            K+ +     VS AL+ +Y K G++  A  +F+ + +R+ + W  ++  + ++   ++ LR
Sbjct: 745  KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804

Query: 306  LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
                    G  P+       +    S  +++     HA+ +K   A+  F          
Sbjct: 805  FFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKR--HAEQVK-AYAMKMF---------- 851

Query: 366  GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
                            + ++  +WN ++  F    +   AI+ F  ++R+    D  T  
Sbjct: 852  -------------PFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 426  SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
             IL A      L   EQIH+ ++KS F   V V +SL+  Y+K G    AE+ F      
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958

Query: 486  DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
            D++SWN+MI +Y+QN    +AI  F  ++ +G++P   T  +VL ACS      D  + F
Sbjct: 959  DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS----TGDEGEYF 1014

Query: 546  E--SMVKEY----GILPEEAHYSCMVDLLGRAGKLEIA 577
               S V  Y    GI+ +    + ++DL  + GK++ A
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 126/564 (22%), Positives = 230/564 (40%), Gaps = 71/564 (12%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            +++    H    K     D FV+ +LVN+Y K G +     +  +MP  D    N +L  
Sbjct: 733  VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792

Query: 193  YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAIDEGKQLHAQTMKLQYLS 251
            Y +N+  D+A  FF         P+   +S +  + G + S +   ++ HA+ +K     
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFFPD---FSNLHCVIGGVNSDVSNNRKRHAEQVKAY--- 846

Query: 252  KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
                                A  +F      N+ +W   +  F   G     +     + 
Sbjct: 847  --------------------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886

Query: 312  EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
               I  +  T  + L++     +  +G   HA VIK   A    V  ++++MYS  G ++
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
             A+K           +SWN  I+ + +N    EAI  F  ++R+    D+FT +S+L+AC
Sbjct: 947  AAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC 1005

Query: 432  SLLPS---LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            S            Q+H   +K    ++  V ++LI+ Y+K G  ++AE +       D+ 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 489  SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL---VQDGQKVF 545
            SWN+++  Y ++ ++RKA+  F  M   GI P +   LA  +A   SG    ++ G+++ 
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGI-PIDEITLA--TAIKASGCLINLKQGKQIQ 1122

Query: 546  ESMVK---------EYGIL---------------------PEEAHYSCMVDLLGRAGKLE 575
               +K           G+L                     P+E  ++ M+      G  +
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182

Query: 576  IALIFISNLPIKPTAP---IWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLS 631
             AL     + +    P    +  L  A  C + L+  + I   +++LD   D  V  +L 
Sbjct: 1183 HALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLV 1242

Query: 632  NMYAEAGLQADAEEQRKLMKMKEI 655
            +MY + G   DA    + M ++++
Sbjct: 1243 DMYCKCGSVQDAYRVFRKMDVRKV 1266



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 8/232 (3%)

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           S  ++ +  +G   HA+++  G     ++   ++ MYS  G +  A+ Q+ +       V
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSAR-QVFDKSSDRDLV 678

Query: 388 SWNAQIAGF--FRNQKTEEAIEAFS--QMVRNDA-ACDEFTYSSILKACSLLPSLATCEQ 442
           +WN+ +A +  F +   E  +E F    ++R    +    T + +LK C L   +   E 
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H   VK  FE ++ V  +L+  Y K G    A  +F ++   D V WN M+KAY +N  
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             +A+  F      G  P  S    V+   +    V + +K     VK Y +
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSD--VSNNRKRHAEQVKAYAM 848


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/628 (34%), Positives = 357/628 (56%), Gaps = 12/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+R   LE GR  HA I K+ +  ++++  +L++MYAKCG +     V   +   +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S   ++  +       +A+  +  +     +P+  T+ ++L    +   +  G+++H 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +  K     +  V  +L+ MY KCG +  A+ +F+ L ++NV++WT +I G+ Q G  + 
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L+  M++  + PN+ T+T  L  C +      G   H  +I+ G     +V  A++ 
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G + EA+K   ++      V+W A + G+ +    +EAI+ F +M +     D+ 
Sbjct: 342 MYCKCGGLKEARKLFGDL-PHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKM 400

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S L +CS    L   + IH ++V + +  +V++ S+L+  Y KCGS +DA  VF+Q+
Sbjct: 401 TFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQM 460

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  +VV+W +MI   +Q+GR R+A+  FE+M  +GI+P   TF +VLSAC+H GLV++G+
Sbjct: 461 SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F SM  +YGI P   HYSC VDLLGRAG LE A   I  +P +P   +W  L +ACR 
Sbjct: 521 KHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRI 580

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           HSD++  E  ++ +L+LDPDD   YV LSN+YA AG   DAE+ R++M+ +++ KEPG S
Sbjct: 581 HSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRV--- 711
           WIEV  K++ F  ++KSH E  ++Y +L +L +QI++ G+         D ++E +V   
Sbjct: 641 WIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTL 700

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTL 739
             HSERLA+ +GL+  P        + L
Sbjct: 701 CSHSERLAITYGLMKTPPGTPIRIVKNL 728



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 237/485 (48%), Gaps = 44/485 (9%)

Query: 99  GCSNTVPVTCYSLESLL----DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           G  N     CY    L     DK   + +L+  +  E L++G++ H  I K  +  +  V
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
             SLV MYAKCGDI     +  ++P  ++ +   L+AGYA+    D A     K+   +V
Sbjct: 235 GTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEV 294

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            PN  TY+++L  C +  A++ GK++H   ++  Y  +  V NAL+TMY KCG +++A  
Sbjct: 295 APNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARK 354

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F  L  R+V++WTA++ G+ Q G +++ + L   M++ GI P++ TFT AL SC+S   
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   H Q++  G +L  ++ +A+V MY+  G + +A+    +M +  + V+W A I 
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMIT 473

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC-EQIHSRIVKSKFE 453
           G  ++ +  EA+E F QM +     D+ T++S+L AC+ +  +    +   S  +    +
Sbjct: 474 GCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIK 533

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
             V   S  ++   + G  E+AE V   +                               
Sbjct: 534 PMVEHYSCFVDLLGRAGHLEEAENVILTMP------------------------------ 563

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP-EEAHYSCMVDLLGRAG 572
                +P  S + A+LSAC     V+ G++  E+++K   + P ++  Y  + ++   AG
Sbjct: 564 ----FQPGPSVWGALLSACRIHSDVERGERAAENVLK---LDPDDDGAYVALSNIYAAAG 616

Query: 573 KLEIA 577
           + E A
Sbjct: 617 RYEDA 621



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 2/290 (0%)

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G  ++ L ++  M   G       F   L  CA LR+   G   HA ++K G+    +
Sbjct: 73  KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +   ++ MY+  G + +A++    + +  + VSW A I  F    +  EA + +  M   
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGI-RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ T+ S+L A +    L   +++H  I K+  E    VG+SL+  Y KCG    A
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKA 251

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + +F +L   +VV+W  +I  Y+Q G+   A+ L EKM    + P   T+ ++L  C+  
Sbjct: 252 QVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTP 311

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
             ++ G+KV   +++  G   E    + ++ +  + G L+ A     +LP
Sbjct: 312 LALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLFGDLP 360



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 110/218 (50%), Gaps = 2/218 (0%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           +   +++ +  ++   +  + +EA+   + M+          +  +L+ C+ L SL    
Sbjct: 57  RKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGR 116

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           ++H+ I+KS  + N ++ ++L+  Y KCGS  DA RVF  +   ++VSW +MI+A+    
Sbjct: 117 EVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGN 176

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           +  +A   +E M + G +P   TF+++L+A ++  L+Q GQKV   + K  G+  E    
Sbjct: 177 QNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKA-GLELEPRVG 235

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           + +V +  + G +  A +    LP K     W  L A 
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVV-TWTLLIAG 272


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/621 (34%), Positives = 362/621 (58%), Gaps = 18/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAKC-GDIKSMVAVVKQMPY 180
           V   CS +E + LG+     + KT     D  V  +L++M+ K  GD++S   V  +MP 
Sbjct: 48  VFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD 107

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   ++  + +      A   FL +      P+ +T S +++ C  +  +  G+Q 
Sbjct: 108 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H   MK        V  +L+ MY KC   G ++DA  VF+ +   NV+SWTAII G+ Q 
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227

Query: 298 GDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G  ++  + L   M +  + PN +TF+  L +CA+L +  +G   +A V+K  +A  + V
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G +++ MYS  G +  A+K    + +  + VS+N  +  + ++  +EEA E F+++    
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEK-NLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG 346

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              + FT++S+L   S + ++   EQIHSRI+KS F+SN+H+ ++LI  Y++CG+ E A 
Sbjct: 347 TGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAF 406

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +VF+++   +V+SW SMI  ++++G A +A+  F KM+  G+ P   T++AVLSACSH G
Sbjct: 407 QVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVG 466

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           L+ +G K F+SM  E+GI+P   HY+C+VDLLGR+G LE A+  ++++P K  A + R  
Sbjct: 467 LISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTF 526

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H ++ + +  ++ ILE DP D A Y+ LSN++A AG   +  E RK MK + ++
Sbjct: 527 LGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLT 586

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           KE GCSWIEV NK+++F+  + SH +  ++Y++L QL  +I+++G+            + 
Sbjct: 587 KEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEE 646

Query: 706 EKEDRVLYHSERLAVGFGLIS 726
           +KE  +  HSE++AV +G IS
Sbjct: 647 QKEQYLFQHSEKIAVAYGFIS 667



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 240/481 (49%), Gaps = 12/481 (2%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S + L++ YA N    +A S F  +      PN Y ++ +   C +   I  GK + 
Sbjct: 6   DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 242 AQTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
              +K  Y  S   V  AL+ M++K  G +E A  VF+ +  RNV++WT +I  F+Q G 
Sbjct: 66  GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               + L   M   G  P+ +T +  +++CA +    +G  FH  V+K G+ L   VG +
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 360 IVDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-EAIEAFSQMVRN 415
           +VDMY+     G + +A+K    M    + +SW A I G+ ++   + EAIE F +MV+ 
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRM-PVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + FT+SS+LKAC+ L  +   EQ+++ +VK +  S   VG+SLI  Y++CG+ E+A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            + F  L   ++VS+N+++ AY+++  + +A  LF ++   G      TF ++LS  S  
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G +  G+++   ++K  G        + ++ +  R G +E A    + +        W  
Sbjct: 365 GAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWTS 422

Query: 596 LFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           +      H     A     ++LE  + P++   Y+ + +  +  GL ++  +  K MK++
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAGVSPNE-VTYIAVLSACSHVGLISEGLKHFKSMKVE 481

Query: 654 E 654
            
Sbjct: 482 H 482



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 152/276 (55%), Gaps = 7/276 (2%)

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +R+++SW+A+I+ +  +    + +     M E G  PNEY FT    +C++  N  +G +
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 341 FHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
               ++K G    D  VG A++DM+  G G++  A K    M    + V+W   I  F +
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRM-PDRNVVTWTLMITRFQQ 122

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
              + +A++ F  MV +    D FT S ++ AC+ +  L+   Q H  ++KS  + +V V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 459 GSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA-RKAIILFEKMV 514
           G SL++ Y KC   GS +DA +VF ++   +V+SW ++I  Y Q+G   R+AI LF +MV
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
              ++P + TF +VL AC++   +  G++V+  +VK
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVK 278



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 6/212 (2%)

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           MG     VSW+A I+ +  N+K  EAI AF  M+      +E+ ++ + +ACS   +++ 
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 440 CEQIHSRIVKSK-FESNVHVGSSLIEAYNKC-GSWEDAERVFSQLTAADVVSWNSMIKAY 497
            + I   ++K+  FES+V VG +LI+ + K  G  E A +VF ++   +VV+W  MI  +
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
            Q G +R A+ LF  MV+ G  P   T   V+SAC+  GL+  G++ F  +V + G+  +
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ-FHCLVMKSGLDLD 179

Query: 558 EAHYSCMVDLLGRA---GKLEIALIFISNLPI 586
                 +VD+  +    G ++ A      +P+
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/568 (36%), Positives = 344/568 (60%), Gaps = 16/568 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  +MP  ++ +   ++  +A+      A   FL ++     P+ +TYS++L+ C  L  
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAI 290
           +  GKQLH++ ++L       V  +L+ MY KC   G ++D+  VFE + + NV+SWTAI
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 291 INGFKQHGDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I  + Q G+ +K  + L C M    I PN ++F+  L +C +L + + G   ++  +K G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +A  + VG +++ MY+  G + +A+K    + +  + VS+NA + G+ +N K+EEA   F
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           +++         FT++S+L   + + ++   EQIH R++K  ++SN  + ++LI  Y++C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G+ E A +VF+++   +V+SW SMI  ++++G A +A+ +F KM+  G +P   T++AVL
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH G++ +GQK F SM KE+GI+P   HY+CMVDLLGR+G L  A+ FI+++P+   
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           A +WR L  ACR H + ++    ++ ILE +PDD A Y+ LSN++A AG   D  + RK 
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 490

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT------ 703
           MK + + KE GCSWIEV N+++RF     SH +  ++Y++L QL  +I+++G+       
Sbjct: 491 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 550

Query: 704 -----DNEKEDRVLYHSERLAVGFGLIS 726
                + +KE  +  HSE++AV FGLIS
Sbjct: 551 LHDIEEEQKEQFLFQHSEKIAVAFGLIS 578



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 256/519 (49%), Gaps = 37/519 (7%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F+K P+R  L T  L+   +  +   G +R+          D F+D   S  VP  
Sbjct: 9   AYKVFDKMPER-NLVTWTLMITRFAQL---GCARDAI--------DLFLDMELSGYVP-- 54

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC-- 165
                   D+     VLS C+    L LG++ H+ + +  +  D  V  SLV+MYAKC  
Sbjct: 55  --------DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 106

Query: 166 -GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD-QAFSFFLKLDGIDVQPNHYTYST 223
            G +     V +QMP  ++ S   ++  YA++   D +A   F K+    ++PNH+++S+
Sbjct: 107 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 166

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+LS    G+Q+++  +KL   S   V N+L++MY + G MEDA   F+ L ++N
Sbjct: 167 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 226

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           ++S+ AI++G+ ++   E+   L   + + GI  + +TF   L+  AS+     G   H 
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           +++K G      +  A++ MYS  G I  A +   EM +  + +SW + I GF ++    
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFAT 345

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSL 462
            A+E F +M+      +E TY ++L ACS +  ++  ++  + + K       +   + +
Sbjct: 346 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 405

Query: 463 IEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGR---ARKAIILFEKMVVEGI 518
           ++   + G   +A E + S    AD + W +++ A   +G     R A     +M++E  
Sbjct: 406 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA----AEMILEQE 461

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
               + ++ + +  + +G  +D  K+ +SM KE  ++ E
Sbjct: 462 PDDPAAYILLSNLHASAGQWKDVVKIRKSM-KERNLIKE 499



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 171/311 (54%), Gaps = 6/311 (1%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ + +RN+++WT +I  F Q G     + L   M   G  P+ +T++  L++C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL---GEIWEAKKQLKEMGKSASSVS 388
           L    +G   H++VI+ G+AL   VG ++VDMY+     G + +++K  ++M +  + +S
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMS 127

Query: 389 WNAQIAGFFRNQKTE-EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           W A I  + ++ + + EAIE F +M+      + F++SS+LKAC  L    T EQ++S  
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           VK    S   VG+SLI  Y + G  EDA + F  L   ++VS+N+++  Y++N ++ +A 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           +LF ++   GI  +  TF ++LS  +  G +  G+++   ++K  G    +   + ++ +
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISM 306

Query: 568 LGRAGKLEIAL 578
             R G +E A 
Sbjct: 307 YSRCGNIEAAF 317



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 122/224 (54%), Gaps = 10/224 (4%)

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           IW    ++ +     + V+W   I  F +     +AI+ F  M  +    D FTYSS+L 
Sbjct: 5   IWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLS 64

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAAD 486
           AC+ L  LA  +Q+HSR+++     +V VG SL++ Y KC   GS +D+ +VF Q+   +
Sbjct: 65  ACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHN 124

Query: 487 VVSWNSMIKAYSQNGRARK-AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           V+SW ++I AY+Q+G   K AI LF KM+   IRP + +F +VL AC +      G++V+
Sbjct: 125 VMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVY 184

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-----LIFISNL 584
              VK  GI       + ++ +  R+G++E A     ++F  NL
Sbjct: 185 SYAVK-LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNL 227


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/568 (36%), Positives = 344/568 (60%), Gaps = 16/568 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  +MP  ++ +   ++  +A+      A   FL ++     P+ +TYS++L+ C  L  
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAI 290
           +  GKQLH++ ++L       V  +L+ MY KC   G ++D+  VFE + + NV+SWTAI
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 291 INGFKQHGDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I  + Q G+ +K  + L C M    I PN ++F+  L +C +L + + G   ++  +K G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +A  + VG +++ MY+  G + +A+K    + +  + VS+NA + G+ +N K+EEA   F
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           +++         FT++S+L   + + ++   EQIH R++K  ++SN  + ++LI  Y++C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G+ E A +VF+++   +V+SW SMI  ++++G A +A+ +F KM+  G +P   T++AVL
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH G++ +GQK F SM KE+GI+P   HY+CMVDLLGR+G L  A+ FI+++P+   
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           A +WR L  ACR H + ++    ++ ILE +PDD A Y+ LSN++A AG   D  + RK 
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 485

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT------ 703
           MK + + KE GCSWIEV N+++RF     SH +  ++Y++L QL  +I+++G+       
Sbjct: 486 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 545

Query: 704 -----DNEKEDRVLYHSERLAVGFGLIS 726
                + +KE  +  HSE++AV FGLIS
Sbjct: 546 LHDIEEEQKEQFLFQHSEKIAVAFGLIS 573



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 256/519 (49%), Gaps = 37/519 (7%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F+K P+R  L T  L+   +  +   G +R+          D F+D   S  VP  
Sbjct: 4   AYKVFDKMPER-NLVTWTLMITRFAQL---GCARDAI--------DLFLDMELSGYVP-- 49

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC-- 165
                   D+     VLS C+    L LG++ H+ + +  +  D  V  SLV+MYAKC  
Sbjct: 50  --------DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 101

Query: 166 -GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD-QAFSFFLKLDGIDVQPNHYTYST 223
            G +     V +QMP  ++ S   ++  YA++   D +A   F K+    ++PNH+++S+
Sbjct: 102 DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSS 161

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+LS    G+Q+++  +KL   S   V N+L++MY + G MEDA   F+ L ++N
Sbjct: 162 VLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKN 221

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           ++S+ AI++G+ ++   E+   L   + + GI  + +TF   L+  AS+     G   H 
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           +++K G      +  A++ MYS  G I  A +   EM +  + +SW + I GF ++    
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHGFAT 340

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSL 462
            A+E F +M+      +E TY ++L ACS +  ++  ++  + + K       +   + +
Sbjct: 341 RALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACM 400

Query: 463 IEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGR---ARKAIILFEKMVVEGI 518
           ++   + G   +A E + S    AD + W +++ A   +G     R A     +M++E  
Sbjct: 401 VDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA----AEMILEQE 456

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
               + ++ + +  + +G  +D  K+ +SM KE  ++ E
Sbjct: 457 PDDPAAYILLSNLHASAGQWKDVVKIRKSM-KERNLIKE 494



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 171/311 (54%), Gaps = 6/311 (1%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ + +RN+++WT +I  F Q G     + L   M   G  P+ +T++  L++C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL---GEIWEAKKQLKEMGKSASSVS 388
           L    +G   H++VI+ G+AL   VG ++VDMY+     G + +++K  ++M +  + +S
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH-NVMS 122

Query: 389 WNAQIAGFFRNQKTE-EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           W A I  + ++ + + EAIE F +M+      + F++SS+LKAC  L    T EQ++S  
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           VK    S   VG+SLI  Y + G  EDA + F  L   ++VS+N+++  Y++N ++ +A 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           +LF ++   GI  +  TF ++LS  +  G +  G+++   ++K  G    +   + ++ +
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISM 301

Query: 568 LGRAGKLEIAL 578
             R G +E A 
Sbjct: 302 YSRCGNIEAAF 312



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 47/79 (59%)

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           W  A +VF ++   ++V+W  MI  ++Q G AR AI LF  M + G  P   T+ +VLSA
Sbjct: 1   WAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 60

Query: 532 CSHSGLVQDGQKVFESMVK 550
           C+  GL+  G+++   +++
Sbjct: 61  CTELGLLALGKQLHSRVIR 79


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 219/629 (34%), Positives = 346/629 (55%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL      E  +LG   HA + K     D FV  +L++ Y+ CG  +    V   + Y D
Sbjct: 151 VLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKD 210

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++A Y +N  F+++   F ++  +  +PN++T++++L  C  L   + GK +H 
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  YL +  V   L+ +YIK G ++DA  VFE + + +VI W+ +I  + Q    E+
Sbjct: 271 CAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEE 330

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + + C MR   + PN++T    L +CASL +  +G   H  V+K G+ +  FV  A++D
Sbjct: 331 AIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMD 390

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + E   QL     + + VSWN  I G+ +    E+A+  F  M+       E 
Sbjct: 391 MYAKCGRM-ENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEV 449

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYSS+L+AC+ + +L    QIHS  VK+ ++ N  VG++LI+ Y KCG+ +DA  VF  L
Sbjct: 450 TYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDML 509

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN+MI  YS +G   +A+  FE M+    +P   TF+ +LSACS++GL+  GQ
Sbjct: 510 REHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQ 569

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SMV+EY I P   HY+CMV LLGR+G L+ A   +  +P +P+  +WR L +AC  
Sbjct: 570 AYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVI 629

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H+D+++    ++++LE++P+D A +V LSN+YA A    +    R  MK K I KEPG S
Sbjct: 630 HNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLS 689

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WIE   +++ F   + SH +   +   L+ L  +  + G+            D +KE R+
Sbjct: 690 WIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRL 749

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSERLA+ +GLI  P+ +     + L 
Sbjct: 750 WVHSERLALAYGLIRTPSISPLRIIKNLR 778



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 219/428 (51%), Gaps = 1/428 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C R      G+  H  I K   C D F    L+N Y K   +     +  +MP  +
Sbjct: 50  LLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRN 109

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S   L+ GY++   F +A   F +L G   + N + +ST+L +  S      G  +HA
Sbjct: 110 TVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHA 169

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              KL + S   V  AL+  Y  CG  E A  VF+ +  ++++SWT ++  + ++  +E+
Sbjct: 170 CVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEE 229

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L   MR  G  PN +TF   L +C  L   ++G   H    K       FVG  ++D
Sbjct: 230 SLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELID 289

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G++ +A +  +EM K    + W+  IA + +++++EEAIE F +M R     ++F
Sbjct: 290 LYIKSGDVDDALQVFEEMPKD-DVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQF 348

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L+AC+ L  L    QIH  +VK   + NV V ++L++ Y KCG  E++ ++FS+ 
Sbjct: 349 TLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSES 408

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
                VSWN++I  Y Q G   KA+ILF+ M+   ++ T  T+ +VL AC+    ++ G 
Sbjct: 409 PNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGS 468

Query: 543 KVFESMVK 550
           ++    VK
Sbjct: 469 QIHSLSVK 476



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 184/369 (49%), Gaps = 2/369 (0%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N Y Y ++L  C        GK LH + +K         +N LL  Y+K   + DA  +F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  RN +S+  +I G+ Q   + + + L   ++ +G + N + F+  L    S   + 
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G+  HA V K G     FVGTA++D YS  G   E  +Q+ +  +    VSW   +A +
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYA-ECARQVFDAIEYKDMVSWTGMVACY 221

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N+  EE+++ FS+M       + FT++S+LKAC  L      + +H    K+ +   +
Sbjct: 222 VENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEEL 281

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            VG  LI+ Y K G  +DA +VF ++   DV+ W+ MI  Y+Q+ ++ +AI +F +M   
Sbjct: 282 FVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRG 341

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            + P   T  ++L AC+    +Q G ++   +VK  G+       + ++D+  + G++E 
Sbjct: 342 LVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK-VGLDMNVFVSNALMDMYAKCGRMEN 400

Query: 577 ALIFISNLP 585
           +L   S  P
Sbjct: 401 SLQLFSESP 409


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/620 (37%), Positives = 340/620 (54%), Gaps = 15/620 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE  +  H    K     D  V  +L++MYAKCG I     V   M   D+ S N ++ G
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGG 309

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            A+N    +AF+ FLK+      P+  TY ++L    S  A +  K++H   +++  +S 
Sbjct: 310 LAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSD 369

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V +A + MYI+CG ++DA+ +F+ L  RNV +W A+I G  Q     + L L   MR 
Sbjct: 370 LRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRR 429

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIW 371
           +G  P+  TF   L++             H+  I  G+   D  VG A+V MY+  G   
Sbjct: 430 EGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV--DLRVGNALVHMYAKCGNTM 487

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            AK+   +M +  +  +W   I+G  ++    EA   F QM+R     D  TY SIL AC
Sbjct: 488 YAKQVFDDMVER-NVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC 546

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           +   +L   +++HS  V +   S++ VG++L+  Y KCGS +DA RVF  +   DV SW 
Sbjct: 547 ASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWT 606

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            MI   +Q+GR   A+ LF KM +EG +P   +F+AVLSACSH+GLV +G++ F S+ ++
Sbjct: 607 VMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQD 666

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P   HY+CMVDLLGRAG+LE A  FI N+PI+P    W  L  AC  + +L+MAEF
Sbjct: 667 YGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEF 726

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            +K+ L+L P  A+ YV LSN+YA  G        R +M+ + I KEPG SWIEV N+I+
Sbjct: 727 AAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIH 786

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAV 720
            F   + SH E  ++Y KLK L+++++  G+          TD E KE  +  HSE+LA+
Sbjct: 787 SFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAI 846

Query: 721 GFGLISLPAKNKFECSRTLE 740
            +GL+  P +N     + L 
Sbjct: 847 VYGLMHTPYRNPIRVYKNLR 866



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 203/413 (49%), Gaps = 3/413 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     L+ G++ HA I ++    D  V  +LVNMY KCG I     +  +M  
Sbjct: 34  LSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE 93

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ S   ++ G A      +AF  FL++      PN YTY ++L    S  A++  K++
Sbjct: 94  RNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEV 153

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  +         V NAL+ MY K G ++DA  VF+G+V+R++ SWT +I G  QHG  
Sbjct: 154 HSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRG 213

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGT 358
           ++   L   M   G  PN  T+   L + A      + ++   H    K G      VG 
Sbjct: 214 QEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGN 273

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MY+  G I +A+     M      +SWNA I G  +N    EA   F +M +    
Sbjct: 274 ALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV 332

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  TY S+L       +    +++H   V+    S++ VGS+ +  Y +CGS +DA+ +
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLI 392

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           F +L   +V +WN+MI   +Q    R+A+ LF +M  EG  P  +TF+ +LSA
Sbjct: 393 FDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/486 (28%), Positives = 237/486 (48%), Gaps = 9/486 (1%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           ++ GYA+    + A   + ++     QPN  TY ++L  C S  ++  GK++HA  ++  
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           + S   V  AL+ MY+KCG ++DA+ +F+ +V+RNVISWT +I G   +G  ++      
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M+ +G  PN YT+   L + AS          H+  +  G+AL   VG A+V MY+  G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            I +A+     M +     SW   I G  ++ + +EA   F QM R     +  TY SIL
Sbjct: 181 SIDDARVVFDGMVER-DIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 429 KACSLLPS--LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            A ++  +  L   +++H    K+ F S++ VG++LI  Y KCGS +DA  VF  +   D
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V+SWN+MI   +QNG   +A  +F KM  EG  P ++T+L++L+    +G  +  ++V +
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC---RCH 603
             V E G++ +    S  V +  R G ++ A +    L ++     W  +       +C 
Sbjct: 360 HAV-EVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQKCG 417

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            +  ++ F+  +     PD       LS    E  L+   E     +    +    G + 
Sbjct: 418 RE-ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNAL 476

Query: 664 IEVYNK 669
           + +Y K
Sbjct: 477 VHMYAK 482



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 8/138 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + +LS C+    LE  +  H+      +  D  V  +LV+MYAKCG +     V 
Sbjct: 535 DATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S   ++ G A++     A   F+K+     +PN Y++  +L+ C     +D
Sbjct: 595 DDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVD 654

Query: 236 EGKQLHAQTMKLQYLSKT 253
           EG++        Q+LS T
Sbjct: 655 EGRR--------QFLSLT 664


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/625 (34%), Positives = 351/625 (56%), Gaps = 12/625 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++  CS +  L  G++ HA  TK     +  +  +L+N+YAKC DI++ +   
Sbjct: 371 DSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF 430

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +    ++   N +L  Y        +F  F ++   ++ PN YTY ++L  C  L  ++
Sbjct: 431 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+Q+H+Q +K  +     V + L+ MY K G ++ A  +      ++V+SWT +I G+ 
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+   +K L     M + GI  +E   T A+++CA L+    G   HAQ    G +    
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 610

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              A+V +YS  G I EA     E  ++  +++WNA ++GF ++   EEA+  F++M R 
Sbjct: 611 FQNALVTLYSKCGNIEEAYLAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNRE 669

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + FT+ S +KA S   ++   +Q+H+ I K+ ++S   V +++I  Y KCGS  DA
Sbjct: 670 GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDA 729

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ++ F +L+  + VSWN+MI AYS++G   +A+  F++M+   +RP + T + VLSACSH 
Sbjct: 730 KKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 789

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV  G + FESM  EYG+ P+  HY C+VD+L RAG L  A  FI  +PI+P A +WR 
Sbjct: 790 GLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRT 849

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +AC  H ++++ EF +  +LEL+P+D+A YV LSN+YA        +  R+ MK K +
Sbjct: 850 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGV 909

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------- 705
            KEPG SWIEV N I+ F+  +++H    +++E  K L ++  +IG+  +          
Sbjct: 910 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQ 969

Query: 706 -EKEDRVLYHSERLAVGFGLISLPA 729
            +K+  +  HSE+LA+ FGL+SLPA
Sbjct: 970 EQKDPTIFIHSEKLAISFGLLSLPA 994



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 175/656 (26%), Positives = 299/656 (45%), Gaps = 74/656 (11%)

Query: 60  GLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDG-FIDDGCSNTVPVTCYSLES----- 113
           GL  S ++ N  +++     SRNG+  R     DG ++ D  S    ++  S        
Sbjct: 200 GLGKSTIVCNPLIDL----YSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEA 255

Query: 114 --LLDKQFVI----------EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
             L    +V+           VLS C + E LE+G + H L+ K     D +V  +LV++
Sbjct: 256 IRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL 315

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHY 219
           Y   G + S   +   M   D  + N L+ G ++    ++A   F  ++LDG+  +P+  
Sbjct: 316 YFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL--EPDSN 373

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T ++++  C S   +  G+QLHA T KL + S   +  ALL +Y KC  +E A + F   
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
              NV+ W  ++  +    D     R+   M+ + I PN+YT+   L +C  L +  +G 
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFR 398
             H+Q+IK    L  +V + ++DMY+ LG++  A   L +  GK    VSW   IAG+ +
Sbjct: 494 QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV--VSWTTMIAGYTQ 551

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               ++A+  F QM+      DE   ++ + AC+ L +L   +QIH++   S F S++  
Sbjct: 552 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPF 611

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            ++L+  Y+KCG+ E+A   F Q  A D ++WN+++  + Q+G   +A+ +F +M  EGI
Sbjct: 612 QNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGI 671

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
              N TF + + A S +  ++ G++V   + K                  G   + E+  
Sbjct: 672 DSNNFTFGSAVKAASETANMKQGKQVHAVITKT-----------------GYDSETEVCN 714

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             IS             ++A C   SD K      KQ LEL   +   +  + N Y++ G
Sbjct: 715 AIIS-------------MYAKCGSISDAK------KQFLELSMKNEVSWNAMINAYSKHG 755

Query: 639 LQADAEEQRKLMKMKEISKE--------PGCSWIEVYNKIYRFF-SQNKSHSEMPK 685
             ++A +    M    +             CS I + +K   +F S N  +   PK
Sbjct: 756 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPK 811



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/440 (28%), Positives = 215/440 (48%), Gaps = 2/440 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I    +     V   L+++Y++ G +     V   +   D +S   +++G +KN   
Sbjct: 193 HARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECE 252

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            +A   F  +  + + P  Y +S++L+ C  + +++ G+QLH   +KL + S T V NAL
Sbjct: 253 VEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 312

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +++Y   G +  AE +F  + QR+ +++  +ING  Q G  EK + L   M+ DG++P+ 
Sbjct: 313 VSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDS 372

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T    + +C+S      G   HA   K G A  D +  A++++Y+   +I  A     E
Sbjct: 373 NTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLE 432

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
             +  + V WN  +  +        +   F QM   +   +++TY SILK C  L  L  
Sbjct: 433 T-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 491

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            EQIHS+I+K+ F+ N +V S LI+ Y K G  + A  +  +    DVVSW +MI  Y+Q
Sbjct: 492 GEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ 551

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
                KA+  F +M+  GIR         +SAC+    +++GQ++        G   +  
Sbjct: 552 YNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDLP 610

Query: 560 HYSCMVDLLGRAGKLEIALI 579
             + +V L  + G +E A +
Sbjct: 611 FQNALVTLYSKCGNIEEAYL 630



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 249/518 (48%), Gaps = 9/518 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ GR+ H+ I K     +  ++  L++ Y   GD+   + V  +MP   I + N ++  
Sbjct: 84  LDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKE 143

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLS 251
            A  +L  + F  F ++   +V PN  T+S +L  C G   A D  +Q+HA+ +      
Sbjct: 144 LASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGK 203

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            T V N L+ +Y + G ++ A  VF+GL  ++  SW A+I+G  ++    + +RL C M 
Sbjct: 204 STIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMY 263

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI P  Y F+  L++C  + +  +G   H  V+K G +   +V  A+V +Y  LG + 
Sbjct: 264 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLI 323

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+     M +   +V++N  I G  +    E+A+E F +M  +    D  T +S++ AC
Sbjct: 324 SAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S   +L + +Q+H+   K  F SN  +  +L+  Y KC   E A   F +    +VV WN
Sbjct: 383 SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            M+ AY      R +  +F +M +E I P   T+ ++L  C   G ++ G+++   ++K 
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 502

Query: 552 YGILPEEAHYSC--MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
              L     Y C  ++D+  + GKL+ A   +     K     W  + A    ++    A
Sbjct: 503 SFQLNA---YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKA 558

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +Q+L+       V +T + + A AGLQA  E Q+
Sbjct: 559 LTTFRQMLDRGIRSDEVGLT-NAVSACAGLQALKEGQQ 595



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 210/426 (49%), Gaps = 19/426 (4%)

Query: 210 DGID------VQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
           +GID      ++PNH T   +L  C  +  ++DEG++LH+Q +KL + +   +S  LL  
Sbjct: 53  NGIDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDF 112

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y+  G ++ A  VF+ + +R + +W  +I          K   L   M  + + PNE TF
Sbjct: 113 YLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTF 172

Query: 323 TVALASCASLRNSHMGY----MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           +  L +C   R   + +      HA++I +G+     V   ++D+YS  G +  A++   
Sbjct: 173 SGVLEAC---RGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFD 229

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            +     S SW A I+G  +N+   EAI  F  M         + +SS+L AC  + SL 
Sbjct: 230 GLYLKDHS-SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 288

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             EQ+H  ++K  F S+ +V ++L+  Y   GS   AE +FS ++  D V++N++I   S
Sbjct: 289 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLS 348

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q G   KA+ LF++M ++G+ P ++T  +++ ACS  G +  GQ++  +   + G    +
Sbjct: 349 QCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL-HAYTTKLGFASND 407

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK--MAEFISKQI 616
                +++L  +   +E AL +     ++    +W  +  A     DL+     F   QI
Sbjct: 408 KIEGALLNLYAKCSDIETALNYFLETEVENVV-LWNVMLVAYGLLDDLRNSFRIFRQMQI 466

Query: 617 LELDPD 622
            E+ P+
Sbjct: 467 EEIVPN 472


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/625 (34%), Positives = 354/625 (56%), Gaps = 12/625 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++  CS +  L  G++ HA  TK     +  +  +L+N+YAKC DI++ +   
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +    ++   N +L  Y        +F  F ++   ++ PN YTY ++L  C  L  ++
Sbjct: 408 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+Q+H+Q +K  +     V + L+ MY K G ++ A  +      ++V+SWT +I G+ 
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+   +K L     M + GI  +E   T A+++CA L+    G   HAQ    G +    
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              A+V +YS  G+I E+     E  ++  +++WNA ++GF ++   EEA+  F +M R 
Sbjct: 588 FQNALVTLYSRCGKIEESYLAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 646

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + FT+ S +KA S   ++   +Q+H+ I K+ ++S   V ++LI  Y KCGS  DA
Sbjct: 647 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 706

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           E+ F +++  + VSWN++I AYS++G   +A+  F++M+   +RP + T + VLSACSH 
Sbjct: 707 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 766

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV  G   FESM  EYG+ P+  HY C+VD+L RAG L  A  FI  +PIKP A +WR 
Sbjct: 767 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 826

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +AC  H ++++ EF +  +LEL+P+D+A YV LSN+YA +      +  R+ MK K +
Sbjct: 827 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 886

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------- 705
            KEPG SWIEV N I+ F+  +++H    +++E  + L ++  +IG+  +          
Sbjct: 887 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 946

Query: 706 EKEDRVLY-HSERLAVGFGLISLPA 729
           E++D +++ HSE+LA+ FGL+SLPA
Sbjct: 947 EQKDPIIFIHSEKLAISFGLLSLPA 971



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 269/575 (46%), Gaps = 52/575 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C + E LE+G + H L+ K     D +V  +LV++Y   G++ S   +   M   D
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313

Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + N L+ G ++    ++A   F  + LDG+  +P+  T ++++  C +   +  G+QL
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGL--EPDSNTLASLVVACSADGTLFRGQQL 371

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA T KL + S   +  ALL +Y KC  +E A   F      NV+ W  ++  +    D 
Sbjct: 372 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 431

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
               R+   M+ + I PN+YT+   L +C  L +  +G   H+Q+IK    L  +V + +
Sbjct: 432 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 491

Query: 361 VDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +DMY+ LG++  A   L +  GK    VSW   IAG+ +    ++A+  F QM+      
Sbjct: 492 IDMYAKLGKLDTAWDILIRFAGKDV--VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 549

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           DE   ++ + AC+ L +L   +QIH++   S F S++   ++L+  Y++CG  E++   F
Sbjct: 550 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 609

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            Q  A D ++WN+++  + Q+G   +A+ +F +M  EGI   N TF + + A S +  ++
Sbjct: 610 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 669

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G++V   + K                  G   + E+    IS             ++A 
Sbjct: 670 QGKQVHAVITKT-----------------GYDSETEVCNALIS-------------MYAK 699

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE- 658
           C   SD +      KQ LE+   +   +  + N Y++ G  ++A +    M    +    
Sbjct: 700 CGSISDAE------KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 753

Query: 659 -------PGCSWIEVYNK-IYRFFSQNKSHSEMPK 685
                    CS I + +K I  F S N  +   PK
Sbjct: 754 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 788



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 213/437 (48%), Gaps = 8/437 (1%)

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           Y  L   T VC        L+++Y++ G +     V   +   D +S   +++G +KN  
Sbjct: 175 YQGLRDSTVVCN------PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 228

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             +A   F  +  + + P  Y +S++L+ C  + +++ G+QLH   +KL + S T V NA
Sbjct: 229 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 288

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+++Y   G +  AE +F  + QR+ +++  +ING  Q G  EK + L   M  DG++P+
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
             T    + +C++      G   HA   K G A  + +  A++++Y+   +I  A     
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E  +  + V WN  +  +        +   F QM   +   +++TY SILK C  L  L 
Sbjct: 409 ET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             EQIHS+I+K+ F+ N +V S LI+ Y K G  + A  +  +    DVVSW +MI  Y+
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q     KA+  F +M+  GIR         +SAC+    +++GQ++        G   + 
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 586

Query: 559 AHYSCMVDLLGRAGKLE 575
              + +V L  R GK+E
Sbjct: 587 PFQNALVTLYSRCGKIE 603



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 247/518 (47%), Gaps = 9/518 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ GR+ H+ I K  +  +  ++  L + Y   GD+     V  +MP   I + N ++  
Sbjct: 61  LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 120

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLS 251
            A   L  + F  F+++   +V PN  T+S +L  C G   A D  +Q+HA+ +      
Sbjct: 121 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 180

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            T V N L+ +Y + G ++ A  VF+GL  ++  SW A+I+G  ++    + +RL C M 
Sbjct: 181 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI P  Y F+  L++C  + +  +G   H  V+K G +   +V  A+V +Y  LG + 
Sbjct: 241 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 300

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+     M +   +V++N  I G  +    E+A+E F +M  +    D  T +S++ AC
Sbjct: 301 SAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S   +L   +Q+H+   K  F SN  +  +L+  Y KC   E A   F +    +VV WN
Sbjct: 360 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 419

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            M+ AY      R +  +F +M +E I P   T+ ++L  C   G ++ G+++   ++K 
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 479

Query: 552 YGILPEEAHYSC--MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
              L     Y C  ++D+  + GKL+ A   +     K     W  + A    ++    A
Sbjct: 480 NFQLNA---YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKA 535

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +Q+L+       V +T + + A AGLQA  E Q+
Sbjct: 536 LTTFRQMLDRGIRSDEVGLT-NAVSACAGLQALKEGQQ 572



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 16/425 (3%)

Query: 208 KLDGID---VQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
           ++D ++   ++PNH T   +L  C  +  ++DEG++LH+Q +KL   S   +S  L   Y
Sbjct: 31  RIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY 90

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           +  G +  A  VF+ + +R + +W  +I          +   L   M  + + PNE TF+
Sbjct: 91  LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 150

Query: 324 VALASCASLRNSHMGY----MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             L +C   R   + +      HA+++ +G+     V   ++D+YS  G +  A++    
Sbjct: 151 GVLEAC---RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 207

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +     S SW A I+G  +N+   EAI  F  M         + +SS+L AC  + SL  
Sbjct: 208 LRLKDHS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 266

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            EQ+H  ++K  F S+ +V ++L+  Y   G+   AE +FS ++  D V++N++I   SQ
Sbjct: 267 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 326

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
            G   KA+ LF++M ++G+ P ++T  +++ ACS  G +  GQ++  +   + G      
Sbjct: 327 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNK 385

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK--MAEFISKQIL 617
               +++L  +   +E AL +     ++    +W  +  A     DL+     F   QI 
Sbjct: 386 IEGALLNLYAKCADIETALDYFLETEVENVV-LWNVMLVAYGLLDDLRNSFRIFRQMQIE 444

Query: 618 ELDPD 622
           E+ P+
Sbjct: 445 EIVPN 449


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/625 (34%), Positives = 354/625 (56%), Gaps = 12/625 (1%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   +  ++  CS +  L  G++ HA  TK     +  +  +L+N+YAKC DI++ +   
Sbjct: 388  DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +    ++   N +L  Y        +F  F ++   ++ PN YTY ++L  C  L  ++
Sbjct: 448  LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507

Query: 236  EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             G+Q+H+Q +K  +     V + L+ MY K G ++ A  +      ++V+SWT +I G+ 
Sbjct: 508  LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            Q+   +K L     M + GI  +E   T A+++CA L+    G   HAQ    G +    
Sbjct: 568  QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627

Query: 356  VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
               A+V +YS  G+I E+     E  ++  +++WNA ++GF ++   EEA+  F +M R 
Sbjct: 628  FQNALVTLYSRCGKIEESYLAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686

Query: 416  DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                + FT+ S +KA S   ++   +Q+H+ I K+ ++S   V ++LI  Y KCGS  DA
Sbjct: 687  GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746

Query: 476  ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            E+ F +++  + VSWN++I AYS++G   +A+  F++M+   +RP + T + VLSACSH 
Sbjct: 747  EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806

Query: 536  GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            GLV  G   FESM  EYG+ P+  HY C+VD+L RAG L  A  FI  +PIKP A +WR 
Sbjct: 807  GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866

Query: 596  LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            L +AC  H ++++ EF +  +LEL+P+D+A YV LSN+YA +      +  R+ MK K +
Sbjct: 867  LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926

Query: 656  SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------- 705
             KEPG SWIEV N I+ F+  +++H    +++E  + L ++  +IG+  +          
Sbjct: 927  KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 986

Query: 706  EKEDRVLY-HSERLAVGFGLISLPA 729
            E++D +++ HSE+LA+ FGL+SLPA
Sbjct: 987  EQKDPIIFIHSEKLAISFGLLSLPA 1011



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 155/575 (26%), Positives = 269/575 (46%), Gaps = 52/575 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C + E LE+G + H L+ K     D +V  +LV++Y   G++ S   +   M   D
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353

Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + N L+ G ++    ++A   F  + LDG+  +P+  T ++++  C +   +  G+QL
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGL--EPDSNTLASLVVACSADGTLFRGQQL 411

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA T KL + S   +  ALL +Y KC  +E A   F      NV+ W  ++  +    D 
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
               R+   M+ + I PN+YT+   L +C  L +  +G   H+Q+IK    L  +V + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531

Query: 361 VDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +DMY+ LG++  A   L +  GK    VSW   IAG+ +    ++A+  F QM+      
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDV--VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           DE   ++ + AC+ L +L   +QIH++   S F S++   ++L+  Y++CG  E++   F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            Q  A D ++WN+++  + Q+G   +A+ +F +M  EGI   N TF + + A S +  ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G++V   + K                  G   + E+    IS             ++A 
Sbjct: 710 QGKQVHAVITKT-----------------GYDSETEVCNALIS-------------MYAK 739

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE- 658
           C   SD +      KQ LE+   +   +  + N Y++ G  ++A +    M    +    
Sbjct: 740 CGSISDAE------KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793

Query: 659 -------PGCSWIEVYNK-IYRFFSQNKSHSEMPK 685
                    CS I + +K I  F S N  +   PK
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 213/437 (48%), Gaps = 8/437 (1%)

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           Y  L   T VC        L+++Y++ G +     V   +   D +S   +++G +KN  
Sbjct: 215 YQGLRDSTVVCN------PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             +A   F  +  + + P  Y +S++L+ C  + +++ G+QLH   +KL + S T V NA
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+++Y   G +  AE +F  + QR+ +++  +ING  Q G  EK + L   M  DG++P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
             T    + +C++      G   HA   K G A  + +  A++++Y+   +I  A     
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E  +  + V WN  +  +        +   F QM   +   +++TY SILK C  L  L 
Sbjct: 449 ET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             EQIHS+I+K+ F+ N +V S LI+ Y K G  + A  +  +    DVVSW +MI  Y+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q     KA+  F +M+  GIR         +SAC+    +++GQ++        G   + 
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626

Query: 559 AHYSCMVDLLGRAGKLE 575
              + +V L  R GK+E
Sbjct: 627 PFQNALVTLYSRCGKIE 643



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 247/518 (47%), Gaps = 9/518 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ GR+ H+ I K  +  +  ++  L + Y   GD+     V  +MP   I + N ++  
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLS 251
            A   L  + F  F+++   +V PN  T+S +L  C G   A D  +Q+HA+ +      
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            T V N L+ +Y + G ++ A  VF+GL  ++  SW A+I+G  ++    + +RL C M 
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI P  Y F+  L++C  + +  +G   H  V+K G +   +V  A+V +Y  LG + 
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+     M +   +V++N  I G  +    E+A+E F +M  +    D  T +S++ AC
Sbjct: 341 SAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S   +L   +Q+H+   K  F SN  +  +L+  Y KC   E A   F +    +VV WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            M+ AY      R +  +F +M +E I P   T+ ++L  C   G ++ G+++   ++K 
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519

Query: 552 YGILPEEAHYSC--MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
              L     Y C  ++D+  + GKL+ A   +     K     W  + A    ++    A
Sbjct: 520 NFQLNA---YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKA 575

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +Q+L+       V +T + + A AGLQA  E Q+
Sbjct: 576 LTTFRQMLDRGIRSDEVGLT-NAVSACAGLQALKEGQQ 612



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 16/425 (3%)

Query: 208 KLDGID---VQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
           ++D ++   ++PNH T   +L  C  +  ++DEG++LH+Q +KL   S   +S  L   Y
Sbjct: 71  RIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY 130

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           +  G +  A  VF+ + +R + +W  +I          +   L   M  + + PNE TF+
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190

Query: 324 VALASCASLRNSHMGY----MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             L +C   R   + +      HA+++ +G+     V   ++D+YS  G +  A++    
Sbjct: 191 GVLEAC---RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +     S SW A I+G  +N+   EAI  F  M         + +SS+L AC  + SL  
Sbjct: 248 LRLKDHS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            EQ+H  ++K  F S+ +V ++L+  Y   G+   AE +FS ++  D V++N++I   SQ
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
            G   KA+ LF++M ++G+ P ++T  +++ ACS  G +  GQ++  +   + G      
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNK 425

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK--MAEFISKQIL 617
               +++L  +   +E AL +     ++    +W  +  A     DL+     F   QI 
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVV-LWNVMLVAYGLLDDLRNSFRIFRQMQIE 484

Query: 618 ELDPD 622
           E+ P+
Sbjct: 485 EIVPN 489


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 221/644 (34%), Positives = 368/644 (57%), Gaps = 21/644 (3%)

Query: 112 ESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E +L  ++ +  V++    E  + +G + HA++ K        V  SL+++Y++ G ++ 
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V  +M   D  + N ++AGY +N    + F  F K+    V+P H T+++++  C S
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS 307

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTA 289
           L  +   K +  + +K  + +   V  AL+    KC  M+DA S+F  + + +NV+SWTA
Sbjct: 308 LRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTA 367

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+G  Q+G  ++ + L   MR +G+ PN +T++  L     +  S M    HA+VIK  
Sbjct: 368 MISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEM----HAEVIKTN 423

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 VGTA++D Y  LG   +A K   E+ ++   ++W+A +AG+ +  +TEEA + F
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDAVKVF-EIIEAKDLMAWSAMLAGYAQTGETEEAAKLF 482

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLAT--CEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            Q+++     +EFT+SS++ AC+  P+ A    +Q H+  +K +  + + V S+L+  Y 
Sbjct: 483 HQLIKEGIKPNEFTFSSVINACAS-PTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYA 541

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           K G+ + A  VF +    D+VSWNSMI  YSQ+G+A+KA+ +F++M    +     TF+ 
Sbjct: 542 KRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIG 601

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           V++AC+H+GLV+ GQK F SM+ ++ I P   HYSCM+DL  RAG LE A+  I+ +P  
Sbjct: 602 VITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFP 661

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
           P A +WR L  A R H ++++ E  +++++ L P+D+A YV LSNMYA AG   +    R
Sbjct: 662 PGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVR 721

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---- 703
           KLM  +++ KEPG SWIEV NK Y F + + +H    ++Y KL +L  +++D G+     
Sbjct: 722 KLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTK 781

Query: 704 -------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                  D +KE  + +HSERLA+ FGLI+ P +   +  + L 
Sbjct: 782 NVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLR 825



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 255/518 (49%), Gaps = 6/518 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V + C+     +LGR+ H    K  +     V  SLV+MY K  ++     V  +M   +
Sbjct: 99  VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   LLAGY+ N L+   +  F ++    V PN YT ST++A   +   +  G Q+HA
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +     V N+L+++Y + GM+ DA  VF+ +  R+ ++W ++I G+ ++G   +
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLE 278

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   M+  G+ P   TF   + SCASLR   +  +   + +K G      V TA++ 
Sbjct: 279 VFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV 338

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
             S   E+ +A      M +  + VSW A I+G  +N   ++A+  FSQM R     + F
Sbjct: 339 ALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHF 398

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYS+IL      P   +  ++H+ ++K+ +E +  VG++L++AY K G+  DA +VF  +
Sbjct: 399 TYSAILTVH--YPVFVS--EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEII 454

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D+++W++M+  Y+Q G   +A  LF +++ EGI+P   TF +V++AC+      +  
Sbjct: 455 EAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQG 514

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F +   +  +       S +V +  + G ++ A         +     W  + +    
Sbjct: 515 KQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVS-WNSMISGYSQ 573

Query: 603 HSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGL 639
           H   K A  +  ++ + + D DA  ++ +      AGL
Sbjct: 574 HGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGL 611



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 191/346 (55%), Gaps = 4/346 (1%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTM 245
           N LL  Y+++    +A + F+ L    +QP+  T S +  IC GSL     G+Q+H Q +
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDG-KLGRQVHCQCV 120

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           K   +   +V  +L+ MY+K   + D   VF+ + +RNV+SWT+++ G+  +G Y     
Sbjct: 121 KFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWE 180

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L C M+ +G+ PN YT +  +A+  +     +G   HA V+K G      V  +++ +YS
Sbjct: 181 LFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYS 240

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            LG + +A+    +M +    V+WN+ IAG+ RN +  E  E F++M          T++
Sbjct: 241 RLGMLRDARDVFDKM-EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFA 299

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TA 484
           S++K+C+ L  LA  + +  + +KS F ++  V ++L+ A +KC   +DA  +FS +   
Sbjct: 300 SVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEG 359

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            +VVSW +MI    QNG   +A+ LF +M  EG++P + T+ A+L+
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/567 (36%), Positives = 330/567 (58%), Gaps = 1/567 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR  HA+  K   C D FV +SL+NMY K G       V   MP  +  S   +++GYA 
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
             L  +A   F  +   +   N + ++++L+       ++ GKQ+H   +K   LS  +V
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+TMY KCG ++DA   FE    +N I+W+A+I G+ Q GD +K L+L   M   GI
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGI 306

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E+TF   + +C+ L  +  G   H  ++K G     +V TA+VDMY+    I +A+K
Sbjct: 307 RPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARK 366

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + +    V W + I G+ +N + E+A+  + +M       +E T +S+LKACS L 
Sbjct: 367 GFDYL-QEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L   +QIH+R VK  F   V +GS+L   Y KCG  +D   VF ++ A DV+SWN+MI 
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQNG  ++A+ LFE+M +EG +P   TF+ +LSACSH GLV+ G   F  M  E+G+ 
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMD 545

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+L RAGKL+ A+ F  +  I     +WR +  ACR + + ++  +  ++
Sbjct: 546 PRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEK 605

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ++EL   +++ YV LS++Y+  G   D E  R++MK++ +SKEPGCSWIE+ + ++ F  
Sbjct: 606 LMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVV 665

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           +++ H ++  ++ +L+QL +Q++D G+
Sbjct: 666 KDQMHPQIGDIHVELRQLSKQMKDEGY 692



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 258/527 (48%), Gaps = 8/527 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           ++ F   +L Y +    L+ G+  HA I K++     ++  SLVN+YAKC  ++    V 
Sbjct: 6   NRSFFTALLQY-THNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVF 63

Query: 176 KQMPYLDIASCNCLLAGYAKNALF--DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +++   D+ S NC++ GY+++           F ++   +  PN +T++ +     +L  
Sbjct: 64  ERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVD 123

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G+  HA  +K+       V ++L+ MY K G+  +A  VF+ + +RN +SW  +I+G
Sbjct: 124 AAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISG 183

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +       + L L  LMR +    NE+ FT  L++       + G   H   +K G+   
Sbjct: 184 YASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSI 243

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             VG A+V MY+  G + +A  Q  E     +S++W+A I G+ ++  +++A++ FS M 
Sbjct: 244 VSVGNALVTMYAKCGSLDDA-LQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMH 302

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +     EFT+  ++ ACS L +    +Q+H  ++K  FES ++V ++L++ Y KC S  
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIV 362

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA + F  L   D+V W SMI  Y QNG    A+ L+ +M +EGI P   T  +VL ACS
Sbjct: 363 DARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACS 422

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
               ++ G+++    VK YG   E    S +  +  + G L+   +    +P +     W
Sbjct: 423 SLAALEQGKQIHARTVK-YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS-W 480

Query: 594 RPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGL 639
             + +    +   K A E   +  LE    D   +V + +  +  GL
Sbjct: 481 NAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGL 527



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 249/512 (48%), Gaps = 47/512 (9%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P++ ++ T L       ++ +GK LHAQ +K    S   ++N+L+ +Y KC  + +A+ V
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 276 FEGLVQRNVISWTAIINGFKQHG--DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           FE +  ++V+SW  IING+ QHG       + L   MR +   PN +TF     + ++L 
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           ++  G + HA  IK       FVG+++++MY   G   EA+K    M +  +SVSW   I
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPER-NSVSWATMI 181

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+   +   EA+  F  M R +   +EF ++S+L A +L   +   +QIH   VK+   
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S V VG++L+  Y KCGS +DA + F   +  + ++W++MI  Y+Q+G + KA+ LF  M
Sbjct: 242 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSM 301

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK----------------------- 550
            + GIRP+  TF+ V++ACS  G   +G++V + ++K                       
Sbjct: 302 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361

Query: 551 -------EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAAC 600
                  +Y   P+   ++ M+    + G+ E AL     + ++   P       +  AC
Sbjct: 362 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 421

Query: 601 RCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
              + L+  + I  + ++     +  +   LS MYA+ G   D     + M  +++    
Sbjct: 422 SSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDV---- 477

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
             SW    N +    SQN    E  +++E+++
Sbjct: 478 -ISW----NAMISGLSQNGCGKEALELFEEMQ 504



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 5/152 (3%)

Query: 90  SFPDGFIDDGCSNTVPVTCYS---LESLLDKQFVI-EVLSYCSREECLELGRRYHALITK 145
           S   G++ +G  N   ++ Y    +E +L  +  +  VL  CS    LE G++ HA   K
Sbjct: 381 SMIGGYVQNG-ENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
                +  + ++L  MYAKCG +K    V ++MP  D+ S N +++G ++N    +A   
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           F ++     +P++ T+  +L+ C  +  ++ G
Sbjct: 500 FEEMQLEGTKPDYVTFVNILSACSHMGLVERG 531


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 230/632 (36%), Positives = 357/632 (56%), Gaps = 20/632 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  + +  L+LG+R HA   K       FV  SL+NMYAKCG ++   +V   M   D
Sbjct: 207 VLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD 266

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AG   N    +A   F +      +    TY+T++ +C +L  +   +QLH+
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYE 301
             +K  +     V  AL   Y KCG + DA ++F      RNV+SWTAII+G  Q+GD  
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             + L   MRED + PNE+T++  L +  S+    +    HAQVIK       FVGTA++
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALL 442

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
             YS  G   +A    K M +    V+W+A ++   +    E A   F++M       +E
Sbjct: 443 ASYSKFGSTEDALSIFK-MIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501

Query: 422 FTYSSILKACSLLPSLATCE--QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           FT SS++ AC+  PS    +  Q H+  +K ++   + V S+L+  Y++ G+ + A+ VF
Sbjct: 502 FTISSVIDACAC-PSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVF 560

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            + T  D+VSWNSMI  Y+Q+G + KAI  F +M   GI+    TFLAV+  C+H+GLV 
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVV 620

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +GQ+ F+SMV+++ I P   HY+CMVDL  RAGKL+  +  I ++P    A +WR L  A
Sbjct: 621 EGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H ++++ +F + ++L L+P D++ YV LSN+YA AG   + +E RKLM  +++ KE 
Sbjct: 681 CRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEA 740

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKE 708
           GCSWI++ NK++ F + +KSH    ++Y+KLK ++ +++  G++ N           +KE
Sbjct: 741 GCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKE 800

Query: 709 DRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             ++ HSERLA+ FGLI+ P     +  + L 
Sbjct: 801 AMLVAHSERLALAFGLIATPPGTPLQIVKNLR 832



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 244/468 (52%), Gaps = 7/468 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMV 172
           L+D   +  VL  C       LG + H L  K     G+     SLV+MY KCG +   +
Sbjct: 96  LVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGI 155

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            V + MP  ++ +   LL G A   +  +  + F ++    + PN +T++++L+   S  
Sbjct: 156 EVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG 215

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+D G+++HAQ++K    S   V N+L+ MY KCG++EDA+SVF  +  R+++SW  ++ 
Sbjct: 216 ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMA 275

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G + +    + L+L    R       + T+   +  CA+L+   +    H+ V+K G  L
Sbjct: 276 GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHL 335

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V TA+ D YS  GE+ +A         S + VSW A I+G  +N     A+  FS+M
Sbjct: 336 TGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRM 395

Query: 413 VRNDAACDEFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
             +    +EFTYS++LKA  S+LP      QIH++++K+ ++    VG++L+ +Y+K GS
Sbjct: 396 REDRVMPNEFTYSAMLKASLSILP-----PQIHAQVIKTNYQHIPFVGTALLASYSKFGS 450

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            EDA  +F  +   DVV+W++M+  ++Q G    A  LF KM ++GI+P   T  +V+ A
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           C+      D  + F ++  +Y         S +V +  R G ++ A I
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 1/179 (0%)

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+  L E+ +  ++V  N  +  + R     E ++ FS   R     D  T S +LKAC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 433 LLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            +P     EQ+H   VK   +   V  G+SL++ Y KCGS  +   VF  +   +VV+W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           S++   +      + + LF +M  EGI P   TF +VLSA +  G +  GQ+V    VK
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/626 (33%), Positives = 350/626 (55%), Gaps = 11/626 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   +  V+   ++ + L  G++ HAL+         F+T  LVNMY+KCG++   + 
Sbjct: 2   LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +   MP  ++ S   +++G ++N+ F +A   F  +      P  + +S+ +  C SL +
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I+ GKQ+H   +K    S+  V + L  MY KCG M DA  VFE +  ++ +SWTA+I+G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + + G++E+ L     M ++ +  +++     L +C +L+    G   H+ V+K G    
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FVG A+ DMYS  G++  A        +  + VS+   I G+   ++ E+ +  F ++ 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     +EFT+SS++KAC+   +L    Q+H++++K  F+ +  V S L++ Y KCG  E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A + F ++     ++WNS++  + Q+G  + AI +FE+MV  G++P   TF+++L+ CS
Sbjct: 362 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 421

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV++G   F SM K YG++P E HYSC++DLLGRAG+L+ A  FI+ +P +P A  W
Sbjct: 422 HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
                ACR H D +M +  ++++++L+P ++   V LSN+YA      D    R  M+  
Sbjct: 482 CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDG 541

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---------- 703
            + K PG SW++V  K + F +++ SH     +YEKL  L+ QI+  G+           
Sbjct: 542 NVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDM 601

Query: 704 -DNEKEDRVLYHSERLAVGFGLISLP 728
            D+ KE  +  HSER+AV F LIS+P
Sbjct: 602 DDSMKEKLLHRHSERIAVAFALISMP 627



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 26/349 (7%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNT 103
           A + AC++F + P +  +S + +I +GY  I E   +   +    D              
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMI-DGYSKIGEFEEALLAFKKMIDE------------- 201

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
                   E  +D+  +   L  C   +  + GR  H+ + K     D FV  +L +MY+
Sbjct: 202 --------EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253

Query: 164 KCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           K GD++S   V        ++ S  CL+ GY +    ++  S F++L    ++PN +T+S
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           +++  C + +A+++G QLHAQ MK+ +     VS+ L+ MY KCG++E A   F+ +   
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 373

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYM 340
             I+W ++++ F QHG  +  +++   M + G+ PN  TF   L  C  A L    + Y 
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY- 432

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           F++     G+  G+   + ++D+    G + EAK+ +  M    ++  W
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/631 (34%), Positives = 344/631 (54%), Gaps = 14/631 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    LE GR+ H  + +T    D F   +LV+MY+K GDI+    V ++MP  D
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N  ++G   +    +A    L++    + PN +T S++L  C    A + G+Q+H 
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+  L+ MY K G ++DA  VF+ + +R++I W A+I+G    G + +
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390

Query: 303 PLRLVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            L L   MR++G+D   N  T    L S AS          HA   K G+     V   +
Sbjct: 391 VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGL 450

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D Y   G++  A K  KE  +S   +S    +    +    E+AI+ F QM+R     D
Sbjct: 451 IDSYWKCGQLDYAIKVFKE-SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPD 509

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            F  SS+L AC+ L +    +Q+H+ ++K +F S+V  G++L+ AY KCGS EDA+  FS
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFS 569

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L    +VSW++MI   +Q+G  ++A+ LF +M+ EG+ P + T  +VLSAC+H+GLV D
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            +K FESM + +GI   E HY+CM+D+LGRAGKLE A+  ++N+P +  A +W  L  A 
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGAS 689

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H D ++    ++++  L+P+ +  +V L+N YA AG+  +  + RKLMK   + KEP 
Sbjct: 690 RVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPA 749

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKED 709
            SW+E+ +K++ F   +KSH     +Y KL +L   +   G+  N           EKE 
Sbjct: 750 MSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKEL 809

Query: 710 RVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + +HSERLAV F LIS P+       + L 
Sbjct: 810 LLSHHSERLAVAFALISTPSGAPIRVKKNLR 840



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 265/547 (48%), Gaps = 24/547 (4%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           +F + V+  C+ +  +  G + HAL   T +  D FV  +LV +Y   G    MV   ++
Sbjct: 103 EFALPVVLKCAPD--VRFGAQVHALAVATRLVHDVFVANALVAVYGGFG----MVDEARR 156

Query: 178 M--PYLDIA------SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           M   Y+ +       S N +++ Y KN     A   F ++     +PN + +S ++  C 
Sbjct: 157 MFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACT 216

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
               ++ G+Q+H   ++  Y      +NAL+ MY K G +E A +VFE +   +V+SW A
Sbjct: 217 GSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNA 276

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            I+G   HG   + L L+  M+  G+ PN +T +  L +CA     ++G   H  ++K  
Sbjct: 277 FISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV 336

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
               +FV   +VDMY+  G + +A+K    M +    + WNA I+G   + +  E +  F
Sbjct: 337 ADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR-DLILWNALISGCSHDGRHGEVLSLF 395

Query: 410 SQMVRN--DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            +M +   D   +  T +S+LK+ +   ++    Q+H+   K    S+ HV + LI++Y 
Sbjct: 396 HRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYW 455

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG  + A +VF +  + D++S  +M+ A SQ      AI LF +M+ +G+ P +    +
Sbjct: 456 KCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSS 515

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L+AC+     + G++V   ++K      +    + +V    + G +E A +  S LP +
Sbjct: 516 LLNACTSLSAYEQGKQVHAHLIKRQ-FTSDVFAGNALVYAYAKCGSIEDADMAFSGLPER 574

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA---EAGLQADAE 644
                W  +      H   K A  +  ++  LD   A  ++TL+++ +    AGL  DA+
Sbjct: 575 GIVS-WSAMIGGLAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSACNHAGLVDDAK 631

Query: 645 EQRKLMK 651
           +  + MK
Sbjct: 632 KYFESMK 638



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 199/408 (48%), Gaps = 14/408 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T  + LA  G+  ++  G  LH+  +K   L+    SN LLT+Y +C +   A +VF+ +
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLA--GFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
                +SW++++  +  +G     L     MR  G+  NE+   V L     +R    G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGA 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE---MGKSASSVSWNAQIAGF 396
             HA  +   +    FV  A+V +Y G G + EA++   E   +G   ++VSWN  I+ +
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N ++ +AI  F +MV +    +EF +S ++ AC+    L    Q+H  +V++ +E +V
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
              ++L++ Y+K G  E A  VF ++ AADVVSWN+ I     +G   +A+ L  +M   
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+ P   T  +VL AC+ +G    G+++   MVK      E      +VD+  + G L+ 
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDD 359

Query: 577 ALIFISNLPIKPTAPIWRPLFAAC----RCHSDLKMAEFISKQILELD 620
           A      +P +    +W  L + C    R    L +   + K+ L+LD
Sbjct: 360 ARKVFDFMPRRDLI-LWNALISGCSHDGRHGEVLSLFHRMRKEGLDLD 406



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 144/282 (51%), Gaps = 3/282 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +++  +  VL   +  E +   R+ HAL  K  +  D  V   L++ Y KCG +   + V
Sbjct: 407 VNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKV 466

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            K+    DI S   ++   ++    + A   F+++    ++P+ +  S++L  C SLSA 
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           ++GKQ+HA  +K Q+ S     NAL+  Y KCG +EDA+  F GL +R ++SW+A+I G 
Sbjct: 527 EQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGL 586

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMAL 352
            QHG  ++ L L   M ++G+ PN  T T  L++C  A L +    Y F +     G+  
Sbjct: 587 AQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY-FESMKETFGIDR 645

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +     ++D+    G++ +A + +  M   A++  W A + 
Sbjct: 646 TEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLG 687


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/665 (31%), Positives = 367/665 (55%), Gaps = 46/665 (6%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C+    LE GR+ H ++    +  D  V  +L+ MY+KCG+I     V  +M  
Sbjct: 161 LSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTE 220

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ S   ++   A++   ++AF  + ++    + PN  T+ ++L  C +  A++ G+++
Sbjct: 221 RNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 280

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+   +    +   V+NAL+TMY KC  +++A  +F+ + +R+VISW+A+I G+ Q G  
Sbjct: 281 HSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYK 340

Query: 301 EKP-----LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +K       +L+  MR +G+ PN+ TF   L +C +      G   HA++ K G  L   
Sbjct: 341 DKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRS 400

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGK------------------------------SAS 385
           + TAI +MY+  G I+EA++   +M                                + +
Sbjct: 401 LQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRN 460

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWN  IAG+ +N    +  E  S M       D  T  +IL+AC  L  L   + +H+
Sbjct: 461 VVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHA 520

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
             VK   ES+  V +SLI  Y+KCG   +A  VF +++  D V+WN+M+  Y Q+G   +
Sbjct: 521 EAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLE 580

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ LF++M+ E + P   T  AV+SACS +GLVQ+G+++F  M +++ + P + HY CMV
Sbjct: 581 AVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMV 640

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGRAG+L+ A  FI ++P +P   +W  L  AC+ H+++++AE  +  ILEL+P  A+
Sbjct: 641 DLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYAS 700

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
           VY+TLSN+YA+AG   D+ + R++M  + + K+ G S IE+  +I+ F +++ +H E+  
Sbjct: 701 VYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDA 760

Query: 686 VYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFE 734
           ++ +L+ L +++++ G+T           D +KE  + +HSE+LA+ +GL+  P+     
Sbjct: 761 IHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIR 820

Query: 735 CSRTL 739
             + L
Sbjct: 821 IMKNL 825



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/581 (27%), Positives = 272/581 (46%), Gaps = 46/581 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+ +C++    E G+  H  + +  V  D ++  SL+N Y+K  D+ S   V ++M   D
Sbjct: 62  VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRD 121

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + + ++A YA N    +AF  F ++   +++PN  T+ ++L  C + S +++G+++H 
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT 181

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
               +   +  AV+ AL+TMY KCG +  A  VF  + +RNV+SWTAII    QH    +
Sbjct: 182 IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L   M + GI PN  TF   L SC +    + G   H+ + +RG+     V  A++ 
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-----QKTEEAIEAFSQMVRNDA 417
           MY     + EA++    M K    +SW+A IAG+ ++     +  +E  +   +M R   
Sbjct: 302 MYCKCNSVQEAREIFDRMSKR-DVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE------------------------ 453
             ++ T+ SIL+AC+   +L    QIH+ + K  FE                        
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420

Query: 454 -------SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
                   NV   +S +  Y KCG    AE+VFS++   +VVSWN MI  Y+QNG   K 
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
             L   M  EG +P   T + +L AC     ++ G+ V    VK  G+  +    + ++ 
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVK-LGLESDTVVATSLIG 539

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDA 624
           +  + G++  A      +  + T   W  + A    H D   A  + K++L+  + P++ 
Sbjct: 540 MYSKCGQVAEARTVFDKMSNRDTVA-WNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEI 598

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLM----KMKEISKEPGC 661
            +   +S   + AGL  +  E  ++M    KM    +  GC
Sbjct: 599 TLTAVISAC-SRAGLVQEGREIFRMMQEDFKMTPRKQHYGC 638



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 178/350 (50%), Gaps = 8/350 (2%)

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
            +K  G+ V  N  TY  ++  C      ++GK +H Q  +L       + N+L+  Y K
Sbjct: 46  IIKQRGLLVNSN--TYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSK 103

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
              +  AE VF  +  R+V++W+++I  +  +    K       M +  I+PN  TF   
Sbjct: 104 FEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSI 163

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +C +      G   H  V   GM     V TA++ MYS  GEI  A +   +M +  +
Sbjct: 164 LKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTER-N 222

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSW A I    +++K  EA E + QM++   + +  T+ S+L +C+   +L    +IHS
Sbjct: 223 VVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHS 282

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I +   E+++ V ++LI  Y KC S ++A  +F +++  DV+SW++MI  Y+Q+G   K
Sbjct: 283 HISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDK 342

Query: 506 AII-----LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             I     L E+M  EG+ P   TF+++L AC+  G ++ G+++   + K
Sbjct: 343 ESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 150/314 (47%), Gaps = 44/314 (14%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC---------- 165
           +K   + +L  C+    LE GR+ HA ++K     D+ +  ++ NMYAKC          
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVF 422

Query: 166 ---------------------GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
                                GD+ S   V  +MP  ++ S N ++AGYA+N    + F 
Sbjct: 423 SKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFE 482

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
               +     QP+  T  T+L  CG+L+ ++ GK +HA+ +KL   S T V+ +L+ MY 
Sbjct: 483 LLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYS 542

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG + +A +VF+ +  R+ ++W A++ G+ QHGD  + + L   M ++ + PNE T T 
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTA 602

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT-------AIVDMYSGLGEIWEAKKQL 377
            +++C     S  G +   + I R M   DF  T        +VD+    G + EA++ +
Sbjct: 603 VISAC-----SRAGLVQEGREIFR-MMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFI 656

Query: 378 KEMGKSASSVSWNA 391
           + M        W+A
Sbjct: 657 QSMPCEPDISVWHA 670



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 200/431 (46%), Gaps = 52/431 (12%)

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + ++L+ ++++ G+  N  T+   +  CA  R    G M H Q+ + G+ +  ++G
Sbjct: 35  GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++++ YS   ++  A++  + M      V+W++ IA +  N    +A + F +M   + 
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRM-TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T+ SILKAC+    L    +IH+ +     E++V V ++LI  Y+KCG    A  
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC----- 532
           VF ++T  +VVSW ++I+A +Q+ +  +A  L+E+M+  GI P   TF+++L++C     
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273

Query: 533 -----------SHSGL-------------------VQDGQKVFESMVKEYGILPEEAHYS 562
                      S  GL                   VQ+ +++F+ M K   I      +S
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVI-----SWS 328

Query: 563 CMVDLLGRAG---KLEIALIF-----ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            M+    ++G   K  I  +F     +    + P    +  +  AC  H  L+    I  
Sbjct: 329 AMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHA 388

Query: 615 QILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           ++ ++  + D ++   + NMYA+ G   +AE+    M  K +      S++ +Y K    
Sbjct: 389 ELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV--AWTSFLSMYIKCGDL 446

Query: 674 FSQNKSHSEMP 684
            S  K  SEMP
Sbjct: 447 SSAEKVFSEMP 457


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/618 (34%), Positives = 359/618 (58%), Gaps = 13/618 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+R   LE GR  HA I K+ +  ++++  +L++MYAKCG +     V   +   +
Sbjct: 53  LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S   ++  +       +AF  +  +     +P+  T+ ++L    +   +  G+++H 
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + ++     +  V  +L+ MY KCG +  A  +F+ L ++NV++WT +I G+ Q G  + 
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L+  M++  + PN+ TF   L  C +      G   H  +I+ G     +V  +++ 
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G + EA+K   ++      V+W A + G+ +    +EAI  F +M +     D+ 
Sbjct: 293 MYCKCGGLEEARKLFSDL-PHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKM 351

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S+L +CS    L   ++IH ++V + +  +V++ S+L+  Y KCGS +DA  VF+Q+
Sbjct: 352 TFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQM 411

Query: 483 TAADVVSWNSMIKAY-SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +  +VV+W ++I    +Q+GR R+A+  F++M  +GI+P   TF +VLSAC+H GLV++G
Sbjct: 412 SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +K F SM  +YGI P   HYSC VDLLGRAG LE A   I ++P  P   +W  L +ACR
Sbjct: 472 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACR 531

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            HSD++  E  ++ +L+LDPDD   YV LS++YA AG   DAE+ R++M+ +++ KEPG 
Sbjct: 532 VHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQ 591

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRV 711
           SWIEV  K++ F  ++KSH E  ++Y +L +L +QI+++G+           D E+++R+
Sbjct: 592 SWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERI 651

Query: 712 LY-HSERLAVGFGLISLP 728
           L+ HSERLA+ +GL+  P
Sbjct: 652 LFSHSERLAITYGLMKTP 669



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 233/462 (50%), Gaps = 15/462 (3%)

Query: 99  GCSNTVPVTCYSLESLL----DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           G  N     CY    L     DK   + +L+  +  E L+LG++ H  I +  +  +  V
Sbjct: 126 GNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRV 185

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
             SLV MYAKCGDI     +  ++P  ++ +   L+AGYA+    D A      +   +V
Sbjct: 186 GTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEV 245

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            PN  T++++L  C + +A++ GK++H   ++  Y  +  V N+L+TMY KCG +E+A  
Sbjct: 246 APNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARK 305

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F  L  R+V++WTA++ G+ Q G +++ + L   M++ GI P++ TFT  L SC+S   
Sbjct: 306 LFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAF 365

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   H Q++  G  L  ++ +A+V MY+  G + +A     +M +  + V+W A I 
Sbjct: 366 LQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIIT 424

Query: 395 G-FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC-EQIHSRIVKSKF 452
           G   ++ +  EA+E F QM +     D+ T++S+L AC+ +  +    +   S  +    
Sbjct: 425 GCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGI 484

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-WNSMIKA---YSQNGRARKAII 508
           +  V   S  ++   + G  E+AE V   +      S W +++ A   +S   R  +A  
Sbjct: 485 KPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERA-- 542

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
              + V++     +  ++A+ S  + +G  +D +KV + M K
Sbjct: 543 --AENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEK 582



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
            F   L  CA LR+   G   HA ++K G+    ++   ++ MY+  G + +A++    +
Sbjct: 49  VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +  + VSW A I  F    K  EA + +  M       D+ T+ S+L A +    L   
Sbjct: 109 -RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLG 167

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +++H  IV++  E    VG+SL+  Y KCG    A  +F +L   +VV+W  +I  Y+Q 
Sbjct: 168 QKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQ 227

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G+   A+ L E M    + P   TF ++L  C+    ++ G+KV   +++  G   E   
Sbjct: 228 GQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQS-GYGRELWV 286

Query: 561 YSCMVDLLGRAGKLEIALIFISNLP----------------------------------I 586
            + ++ +  + G LE A    S+LP                                  I
Sbjct: 287 VNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGI 346

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADA 643
           KP    +  +  +C   + L+  + I +Q++    + D  +   L +MYA+ G   DA
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDA 404



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 4/256 (1%)

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +  + +EA+   + M+          +  +L+ C+ L SL    ++H+ I+KS  + N +
Sbjct: 24  KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + ++L+  Y KCGS  DA RVF  +   ++VSW +MI+A+    +  +A   +E M + G
Sbjct: 84  LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            +P   TF+++L+A ++  L+Q GQKV   +V E G+  E    + +V +  + G +  A
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIV-EAGLELEPRVGTSLVGMYAKCGDISKA 202

Query: 578 LIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            +    LP K     W  L A  A +   D+ +    + Q  E+ P+       L     
Sbjct: 203 RVIFDRLPEKNVV-TWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261

Query: 636 EAGLQADAEEQRKLMK 651
            A L+   +  R +++
Sbjct: 262 PAALEHGKKVHRYIIQ 277


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/636 (35%), Positives = 357/636 (56%), Gaps = 18/636 (2%)

Query: 119  FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS--LVNMYAKCGDIKSMVAVVK 176
            FV+ +LS  +   CLELG++ H ++ ++ +  DQ V+    L+NMY K G +     V  
Sbjct: 909  FVV-MLSVVAGLNCLELGKQIHGIVVRSGL--DQVVSVGNCLINMYVKTGSVSRARTVFW 965

Query: 177  QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA-ID 235
            QM  +D+ S N +++G A + L + +   F+ L    + P+ +T +++L  C SL     
Sbjct: 966  QMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH 1025

Query: 236  EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
               Q+HA  MK   +  + VS  L+ +Y K G ME+AE +F      ++ SW A+++G+ 
Sbjct: 1026 LATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYI 1085

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
              GD+ K LRL  LM+E G   N+ T   A  +   L     G    A V+KRG  L  F
Sbjct: 1086 VSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLF 1145

Query: 356  VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            V + ++DMY   GE+  A++   E+  S   V+W   I+G   N + E A+  +  M  +
Sbjct: 1146 VISGVLDMYLKCGEMESARRIFNEI-PSPDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204

Query: 416  DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                DE+T+++++KACSLL +L    QIH+  VK     +  V +SL++ Y KCG+ EDA
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1264

Query: 476  ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
              +F +   + + SWN+MI   +Q+G A +A+  FE+M   G+ P   TF+ VLSACSHS
Sbjct: 1265 RGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHS 1324

Query: 536  GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            GLV +  + F SM K YGI PE  HYSC+VD L RAG++  A   IS++P + +A ++R 
Sbjct: 1325 GLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRT 1384

Query: 596  LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            L  ACR   D +  + +++++L L+P D+A YV LSN+YA A    +    R +M+   +
Sbjct: 1385 LLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANV 1444

Query: 656  SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------TDNEK 707
             K+PG SW+++ NK++ F + ++SH E   +Y K++ +M++I + G+         D E+
Sbjct: 1445 KKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDTDFALVDVEE 1504

Query: 708  EDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            ED+   + YHSE+LA+ +GL+  P        + L 
Sbjct: 1505 EDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLR 1540



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 197/397 (49%), Gaps = 3/397 (0%)

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            D+ + N  L+ + +     +A   F+ +    V  +  T+  ML++   L+ ++ GKQ+H
Sbjct: 870  DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
               ++       +V N L+ MY+K G +  A +VF  + + +++SW  +I+G    G  E
Sbjct: 930  GIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEE 989

Query: 302  KPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAI 360
              + +   +   G+ P+++T    L +C+SL    H+    HA  +K G+ L  FV T +
Sbjct: 990  CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTL 1049

Query: 361  VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            +D+YS  G++ EA+             SWNA + G+  +    +A+  +  M  +    +
Sbjct: 1050 IDVYSKSGKMEEAEFLFVNQ-DGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108

Query: 421  EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            + T ++  KA   L  L   +QI + +VK  F  ++ V S +++ Y KCG  E A R+F+
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168

Query: 481  QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            ++ + D V+W +MI    +NG+   A+  +  M +  ++P   TF  ++ ACS    ++ 
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            G+++  + VK      +    + +VD+  + G +E A
Sbjct: 1229 GRQIHANTVK-LNCAFDPFVMTSLVDMYAKCGNIEDA 1264



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 223/518 (43%), Gaps = 51/518 (9%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLL 190
            L LG+R HA I  +    D+F+T +L+ MY+KCG + S   +    P    D+ + N +L
Sbjct: 642  LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 191  AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
            + +A  A     F  F  L    V    +T + +  +C   ++    + LH   +K+   
Sbjct: 702  SAHADKA--RDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQ 759

Query: 251  SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
                V+ AL+ +Y K G + +A  +F+G+  R+V+ W  ++  +   G   + L L    
Sbjct: 760  WDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEF 819

Query: 311  REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
               G+ P++ T                     A+V+K    + +                
Sbjct: 820  NRTGLRPDDVTLCTL-----------------ARVVKSKQNVLE---------------- 846

Query: 371  WEAKKQLKEMGK----------SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            W+ K QLK  G            +  ++WN  ++ F +  +T EA++ F  M+ +  ACD
Sbjct: 847  WQLK-QLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACD 905

Query: 421  EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              T+  +L   + L  L   +QIH  +V+S  +  V VG+ LI  Y K GS   A  VF 
Sbjct: 906  GLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFW 965

Query: 481  QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            Q+   D+VSWN+MI   + +G    ++ +F  ++  G+ P   T  +VL ACS  G    
Sbjct: 966  QMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH 1025

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
                  +   + G++ +    + ++D+  ++GK+E A     N      A  W  +    
Sbjct: 1026 LATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLAS-WNAMMHGY 1084

Query: 601  RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
                D   A  +   IL  +  + A  +TL+N    AG
Sbjct: 1085 IVSGDFPKA--LRLYILMQESGERANQITLANAAKAAG 1120



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 160/375 (42%), Gaps = 42/375 (11%)

Query: 214 VQPNHYTYS-----TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           + P H  +S     ++L    + S +  GK+ HA+ +   +     ++N L+TMY KCG 
Sbjct: 617 IPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGS 676

Query: 269 MEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKP-LRLVCLMREDGIDPNEYTFTVA 325
           +  A  +F+      R++++W AI++    H D  +    L  L+R   +    +T    
Sbjct: 677 LSSARKLFDTTPDTSRDLVTWNAILSA---HADKARDGFHLFRLLRRSFVSATRHTLAPV 733

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
              C    +       H   +K G+    FV  A+V++Y+  G I EA+     MG    
Sbjct: 734 FKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLR-D 792

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V WN  +  +       EA+  FS+  R     D+ T       C+L           +
Sbjct: 793 VVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL------CTL-----------A 835

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF---SQLTAADVVSWNSMIKAYSQNGR 502
           R+VKSK ++ +      ++AY          ++F        +DV++WN  +  + Q G 
Sbjct: 836 RVVKSK-QNVLEWQLKQLKAY--------GTKLFMYDDDDDGSDVIAWNKTLSWFLQRGE 886

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             +A+  F  M+   +     TF+ +LS  +    ++ G+++   +V+  G+    +  +
Sbjct: 887 TWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGN 945

Query: 563 CMVDLLGRAGKLEIA 577
           C++++  + G +  A
Sbjct: 946 CLINMYVKTGSVSRA 960


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/626 (33%), Positives = 348/626 (55%), Gaps = 11/626 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   +  V+   ++ + L  G++ HAL+         F+T  LVNMY+KCG++   + 
Sbjct: 2   LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALK 61

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +   MP  ++ S   +++G ++N+ F +A   F  +      P  + +S+ +  C SL +
Sbjct: 62  LFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGS 121

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I+ GKQ+H   +K    S+  V + L  MY KCG M DA  VFE +  ++ +SWTA+I+G
Sbjct: 122 IEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDG 181

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + + G++E+ L     M ++ +  +++     L +C +L+    G   H+ V+K G    
Sbjct: 182 YSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 241

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FVG A+ DMYS  G++  A        +  + VS+   I G+   ++ E+ +  F ++ 
Sbjct: 242 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 301

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     +EFT+SS++KAC+   +L    Q+H++++K  F+ +  V S L++ Y KCG  E
Sbjct: 302 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 361

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A + F ++     ++WNS++  + Q+G  + AI  FE+MV  G++P   TF+++L+ CS
Sbjct: 362 HAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCS 421

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV++G   F SM K YG++P E HYSC++DLLGRAG+L+ A  FI+ +P +P A  W
Sbjct: 422 HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
                ACR H D +M +  ++++++L+P ++   V LSN+YA      D    R  M+  
Sbjct: 482 CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDG 541

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---------- 703
            + K PG SW++V  K + F +++ SH     +YEKL  L+ QI+  G+           
Sbjct: 542 NVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDM 601

Query: 704 -DNEKEDRVLYHSERLAVGFGLISLP 728
            D  KE  +  HSER+AV F LIS+P
Sbjct: 602 DDXMKEKLLHRHSERIAVAFALISMP 627



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 166/349 (47%), Gaps = 26/349 (7%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNT 103
           A + AC++F + P +  +S + +I +GY  I E   +   +    D              
Sbjct: 156 AMFDACKVFEEMPCKDEVSWTAMI-DGYSKIGEFEEALLAFKKMIDE------------- 201

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
                   E  +D+  +   L  C   +  + GR  H+ + K     D FV  +L +MY+
Sbjct: 202 --------EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253

Query: 164 KCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           K GD++S   V        ++ S  CL+ GY +    ++  S F++L    ++PN +T+S
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           +++  C + +A+++G QLHAQ MK+ +     VS+ L+ MY KCG++E A   F+ +   
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDP 373

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYM 340
             I+W ++++ F QHG  +  ++    M + G+ PN  TF   L  C  A L    + Y 
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY- 432

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           F++     G+  G+   + ++D+    G + EAK+ +  M    ++  W
Sbjct: 433 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 481


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 235/692 (33%), Positives = 380/692 (54%), Gaps = 34/692 (4%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F+    R G+S + LI          G+ + G+S R          D     +  
Sbjct: 314 SAERIFSTMNSRDGVSYNSLI---------SGLVQQGFSDRALELFTKMQRD----CLKP 360

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            C ++ SLL         S C+    L  G + H+   K  +  D  +  SL+++Y+KC 
Sbjct: 361 DCITVASLL---------SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           D+++           +I   N +L  Y +      +F  F ++    + PN +TY ++L 
Sbjct: 412 DVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C SL A+  G+Q+H   +K  +     V + L+ MY K G +  A  +   L + +V+S
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WTA+I G+ QH  + + L+L   M   GI  +   F  A+++CA +R    G   HAQ  
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
             G      +  A++ +Y+  G I EA    +++G   +++SWN+ ++G  ++   EEA+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK-NNISWNSLVSGLAQSGYFEEAL 650

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F +M+R +A  + FTY S + A + L ++   +QIHS ++K+ ++S   V +SLI  Y
Sbjct: 651 QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K GS  DA R F+ ++  +V+SWN+MI  YSQ+G   +A+ LFE+M V GI P + TF+
Sbjct: 711 AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
            VLSACSH GLV++G   FESM K + ++P+  HY C+VDLLGRAG+L+ A+ +I  +PI
Sbjct: 771 GVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
              A IWR L +AC  H ++++ E  +  +LEL+P+D+A YV +SN+YA +      +  
Sbjct: 831 PADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWS 890

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD-- 704
           RKLMK + + KEPG SWIEV N ++ F++ +K H    ++YE +  L ++  +IG+    
Sbjct: 891 RKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950

Query: 705 ----NEKE----DRVLY-HSERLAVGFGLISL 727
               NE E    D + + HSE+LA+ FGL+SL
Sbjct: 951 FSLLNESEQGQKDPITHVHSEKLAIAFGLLSL 982



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 233/476 (48%), Gaps = 9/476 (1%)

Query: 130 EECLELGR-----RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
           E CL  G      R H  I+K+   G+  +  SLV+ Y + GD    V V  +     + 
Sbjct: 66  EGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVF 125

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQ 243
           S N ++  +       Q F  F ++    + PN YT++ +L  C G   A +  KQ+H++
Sbjct: 126 SWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSR 185

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
           T    + S   V+N L+ +Y K G +E A+ VF  +  +++++W A+I+G  Q+G  E+ 
Sbjct: 186 TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEA 245

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L C M    I P  Y  +  L++   ++   +G   H  VIK G     +V   +V +
Sbjct: 246 ILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVAL 305

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS   ++  A++    M  S   VS+N+ I+G  +   ++ A+E F++M R+    D  T
Sbjct: 306 YSRSRKLISAERIFSTM-NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +S+L AC+ + +L    Q+HS  +K+   +++ +  SL++ Y+KC   E A + F    
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTE 424

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++V WN M+ AY Q      +  +F +M +EG+ P   T+ ++L  C+  G +  G++
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +   ++K  G        S ++D+  + G+L +AL  +  LP       W  + A 
Sbjct: 485 IHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS-WTAMIAG 538



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 258/544 (47%), Gaps = 33/544 (6%)

Query: 52  FNKSPKRAGLSTSDLIFNGYMNIEEK------------------GISRNGYSTRNDSFPD 93
           F+ SP  A L       NGY+   +K                  G+S+NG          
Sbjct: 191 FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILL-- 248

Query: 94  GFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
            F D   S   P T Y L S         VLS  ++ +  ELG + H L+ K     + +
Sbjct: 249 -FCDMHASEIFP-TPYVLSS---------VLSASTKIQLFELGEQLHCLVIKWGFHSETY 297

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V   LV +Y++   + S   +   M   D  S N L++G  +    D+A   F K+    
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P+  T +++L+ C S+ A+ +G QLH+  +K    +   +  +LL +Y KC  +E A 
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
             F      N++ W  ++  + Q  +      +   M+ +G+ PN++T+   L +C SL 
Sbjct: 418 KFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
             ++G   H  VIK G  L  +V + ++DMY+  G++  A + L+ + +    VSW A I
Sbjct: 478 ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED-DVVSWTAMI 536

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AG+ ++    EA++ F +M       D   ++S + AC+ + +L   +QIH++   + F 
Sbjct: 537 AGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG 596

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           +++ + ++LI  Y +CG  ++A   F ++   + +SWNS++   +Q+G   +A+ +F +M
Sbjct: 597 ADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRM 656

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +         T+ + +SA +    ++ GQ++  SMV + G   E    + ++ L  ++G 
Sbjct: 657 LRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGS 715

Query: 574 LEIA 577
           +  A
Sbjct: 716 ISDA 719



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 15/374 (4%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V+ N+  Y  +L  C +  ++ E  +LH +  K  +  +  + ++L+  Y + G    A 
Sbjct: 54  VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALASCA 330
            VF+    R+V SW  +I+ F      +   ++ CL R    +GI PN YTF   L +C 
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV 170

Query: 331 SLRNSHMGYMFHAQVIKRGMALG----DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
                 + + +  QV  R    G      V   ++D+YS  G I  AKK    +      
Sbjct: 171 G---GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DI 226

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V+W A I+G  +N   EEAI  F  M  ++     +  SS+L A + +      EQ+H  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           ++K  F S  +V + L+  Y++      AER+FS + + D VS+NS+I    Q G + +A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF KM  + ++P   T  ++LSAC+  G +  G ++    +K  G+  +      ++D
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLD 405

Query: 567 LLGRAGKLEIALIF 580
           L  +   +E A  F
Sbjct: 406 LYSKCADVETAHKF 419


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/637 (32%), Positives = 354/637 (55%), Gaps = 50/637 (7%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C      + G++ H+ +      GD FV  +L++MYAKC D +S + V  +M   + 
Sbjct: 182 LRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQ 241

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKL----DGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
            + N +++  A+   F+ A   FL++    DGI  QP+ +T++T+L +C +    ++G+Q
Sbjct: 242 VTWNSIISAEAQFGHFNDALVLFLRMQESEDGI--QPDQFTFTTLLTLCANQRNDNQGRQ 299

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  ++        V   L+ MY +CG +  A+ +F  + +RN  SW ++I G++Q+G+
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 359

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ LRL   M+ +GI P+ ++ +  L+SC SL +S  G   H  +++  M     +   
Sbjct: 360 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 419

Query: 360 IVDMYSGLGEI---WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           +VDMY+  G +   W+   Q   + K  ++  WN+ +AG+      +E+   F +M+ +D
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQ--TIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESD 477

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D  T  +I+    L                          ++L++ Y+KCG+   A 
Sbjct: 478 IEYDVLTMVTIVNLLVL-------------------------ETALVDMYSKCGAITKAR 512

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF  +   ++VSWN+MI  YS++G +++A+IL+E+M  +G+ P   TFLA+LSACSH+G
Sbjct: 513 TVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTG 572

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV++G ++F SM ++Y I  +  HY+CMVDLLGRAG+LE A  F+  +PI+P    W  L
Sbjct: 573 LVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGAL 632

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H D+ M    ++++ ELDP +   YV +SN+YA AG   + E+ R++MKMK + 
Sbjct: 633 LGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVK 692

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-------DNEKED 709
           K+PG SWIE+ ++I  F + +K+H +  ++Y  L+ L  Q + +G+         N K+ 
Sbjct: 693 KDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDI 752

Query: 710 R-------VLYHSERLAVGFGLISLPAKNKFECSRTL 739
           +       +L HSERLA+  GLISLP K+     + L
Sbjct: 753 KEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNL 789



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 218/433 (50%), Gaps = 21/433 (4%)

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED- 271
           DV P    YS+++  C   ++   GK +H Q +   Y     +   +L +Y + G ++D 
Sbjct: 68  DVNP--LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125

Query: 272 --AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
             A  +FE + +RN+ +W  +I  + +  DY +   +   M + G+ P+ +TF  AL  C
Sbjct: 126 CYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVC 185

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            +LR+   G   H+++I  G     FVG A++DMY+   +     K   EMG+  + V+W
Sbjct: 186 GALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER-NQVTW 244

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRI 447
           N+ I+   +     +A+  F +M  ++     D+FT++++L  C+   +     QIH+ +
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           +++    N+ V + L+  Y++CG    A+ +F+++   +  SWNSMI+ Y QNG  ++A+
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEAL 364

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK----EYGILPEEAHYSC 563
            LF++M + GI+P   +  ++LS+C      Q G+++   +V+    E GIL        
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ-----VV 419

Query: 564 MVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS-KQILELDP 621
           +VD+  + G ++ A  ++   +       +W  + A    +  LK   F    ++LE D 
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG-YANKGLKKESFNHFLEMLESDI 478

Query: 622 D-DAAVYVTLSNM 633
           + D    VT+ N+
Sbjct: 479 EYDVLTMVTIVNL 491


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 214/629 (34%), Positives = 344/629 (54%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    LE GR+ HA++ +T    D F   +LV+MY+K GDI+    V  ++P  D
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETD 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N  ++G   +     A    L++    + PN +T S++L  C    A + G+Q+H 
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHG 327

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   ++  L+ MY K G+++DA+ VF+ + QR+++ W A+I+G      + +
Sbjct: 328 FMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAE 387

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L C MR++G D N  T    L S ASL         HA   K G      V   ++D
Sbjct: 388 ALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLID 447

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y     +  A +  ++ G S   +++ + I    +    E+AI+ F +M+R     D F
Sbjct: 448 SYWKCDCLNYAYRVFEKHG-SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPF 506

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H+ ++K +F S+V  G++L+  Y KCGS EDA+  FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGL 566

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               VVSW++MI   +Q+G  ++A+ +F +MV E I P + T  +VL AC+H+GLV + +
Sbjct: 567 PEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAK 626

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM + +GI   E HY+CM+DLLGRAGKL+ A+  ++++P +  A +W  L AA R 
Sbjct: 627 RYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRV 686

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D ++    ++++  L+P+ +  +V L+N YA AG+  D  + RKLMK  ++ KEP  S
Sbjct: 687 HRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMS 746

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           W+E+ +K++ F   +KSH     +Y KL +L   +   G+             NEKE  +
Sbjct: 747 WVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLL 806

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSERLAV F LIS PA       + L 
Sbjct: 807 SHHSERLAVAFALISTPAGAPIRVKKNLR 835



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 265/544 (48%), Gaps = 17/544 (3%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           +FV+ V+  C+ +     G + HAL   T + GD FV  +LV MY   G +     V  +
Sbjct: 103 EFVLPVVLKCAPDA--GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDE 160

Query: 178 MP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                +  S N L++ Y KN     A   F ++    VQPN + +S ++  C     ++ 
Sbjct: 161 AGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEA 220

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+++HA  ++  Y      +NAL+ MY K G +  A  VF  + + +V+SW A I+G   
Sbjct: 221 GRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVL 280

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG  +  L L+  M+  G+ PN +T +  L +CA     ++G   H  ++K      +++
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYI 340

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
              +VDMY+  G + +AKK    + +    V WNA I+G     +  EA+  F +M +  
Sbjct: 341 AFGLVDMYAKHGLLDDAKKVFDWIPQR-DLVLWNALISGCSHGAQHAEALSLFCRMRKEG 399

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +  T +++LK+ + L +++   Q+H+   K  F S+ HV + LI++Y KC     A 
Sbjct: 400 FDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAY 459

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF +  + D++++ SMI A SQ      AI LF +M+ +G+ P      ++L+AC+   
Sbjct: 460 RVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLS 519

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
             + G++V   ++K    + +    + +V    + G +E A +  S LP K     W  +
Sbjct: 520 AYEQGKQVHAHLIKRQ-FMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVS-WSAM 577

Query: 597 FAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA---EAGLQADAEEQRKLMK 651
                 H   K A  +  ++++  + P+    ++T++++      AGL  +A  +R    
Sbjct: 578 IGGLAQHGHGKRALDVFHRMVDEHISPN----HITMTSVLCACNHAGLVDEA--KRYFNS 631

Query: 652 MKEI 655
           MKE+
Sbjct: 632 MKEM 635



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 215/442 (48%), Gaps = 9/442 (2%)

Query: 126 YCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIAS 185
           Y + +  L+ G   HA + K+ +         L++ Y+KC    S   V  ++P     S
Sbjct: 14  YAATQSLLQ-GAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVS 70

Query: 186 CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
            + L+  Y+ NA+   A   F  +    V+ N +    +L  C   +    G QLHA  M
Sbjct: 71  WSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GTQLHALAM 127

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDYEKPL 304
                    V+NAL+ MY   G +++A  VF E   +RN +SW  +++ + ++      +
Sbjct: 128 ATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAV 187

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
           ++   M   G+ PNE+ F+  + +C   R+   G   HA VI+ G     F   A+VDMY
Sbjct: 188 KVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMY 247

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           S LG+I  A     ++ ++   VSWNA I+G   +   + A+E   QM  +    + FT 
Sbjct: 248 SKLGDIRMAAVVFGKVPET-DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTL 306

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           SSILKAC+   +     QIH  +VK+  +S+ ++   L++ Y K G  +DA++VF  +  
Sbjct: 307 SSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQ 366

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            D+V WN++I   S   +  +A+ LF +M  EG     +T  AVL + +    + D ++V
Sbjct: 367 RDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQV 426

Query: 545 FESMVKEYGILPEEAHYSCMVD 566
             ++ ++ G L +    + ++D
Sbjct: 427 -HALAEKLGFLSDSHVVNGLID 447



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 179/381 (46%), Gaps = 7/381 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T   +L    +  ++ +G  +HA  +K    +     N LL+ Y KC +   A  VF+ +
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
                +SW++++  +  +      L     MR   +  NE+   V L  CA   ++  G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVL-KCAP--DAGFGT 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA  +  G+    FV  A+V MY G G + EA+    E G   ++VSWN  ++ + +N
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +   A++ F +MV      +EF +S ++ AC+    L    ++H+ ++++ ++ +V   
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y+K G    A  VF ++   DVVSWN+ I     +G  + A+ L  +M   G+ 
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T  ++L AC+ SG    G+++   MVK          +  +VD+  + G L+ A  
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFG-LVDMYAKHGLLDDAKK 359

Query: 580 FISNLPIKPTAPIWRPLFAAC 600
               +P +    +W  L + C
Sbjct: 360 VFDWIPQRDLV-LWNALISGC 379


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/632 (34%), Positives = 352/632 (55%), Gaps = 17/632 (2%)

Query: 111 LESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE     QF +  VL  CS    ++ G   H  + K    G+ FV   LV+MYAKC  + 
Sbjct: 155 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVS 214

Query: 170 SMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
               + K + +   +      ++ GYA+N    +A  FF  +    V+ N YT+ T+L  
Sbjct: 215 EAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C S+ A   G+Q+H   +K  + S   V +AL+ MY KCG +++A+++ E +   +V+SW
Sbjct: 275 CSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW 334

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            +++ GF +HG  E+ LRL   M    +  ++YTF   L  C  +  S      H  +IK
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIK 392

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G      V  A+VDMY+  G++  A    ++M +    +SW + + G+ +N   EE+++
Sbjct: 393 TGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEK-DVISWTSLVTGYAQNNSHEESLK 451

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F  M       D+F  +SIL AC+ L  L   +Q+H   +KS    +  V +SL+  Y 
Sbjct: 452 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYA 511

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG  +DA+ +F  +   DV++W ++I  Y+QNG+ R ++  ++ MV  G RP   TF+ 
Sbjct: 512 KCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIG 571

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L ACSH+GLV +G+K F+ M K YGI P   HY+CM+DL GR+GKL+ A   +  + +K
Sbjct: 572 LLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVK 631

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
           P A +W+ L +ACR H +L++AE  +  + EL+P +A  YV LSNMY+ +    D  + R
Sbjct: 632 PDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIR 691

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---- 703
           KLMK K I KEPGCSW+E+ +++  F S ++ H    ++Y K+ +++ +I++ G+     
Sbjct: 692 KLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMS 751

Query: 704 ----DNEKEDR---VLYHSERLAVGFGLISLP 728
               D +KE +   + YHSE+LAV FGL++ P
Sbjct: 752 FSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAP 783



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 234/469 (49%), Gaps = 48/469 (10%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK-------NALFD----- 200
           + T  L+N  +K G +     +  +MP  D  S N +++ Y           LFD     
Sbjct: 66  YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125

Query: 201 -------------------QAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                              +AF  F  ++L+G   + + +T  ++L +C SL  I  G+ 
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEGW--KASQFTLGSVLRVCSSLGLIQTGEM 183

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQH 297
           +H   +K  +     V   L+ MY KC  + +AE +F+GL   ++N + WTA++ G+ Q+
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GD  K +     M   G++ N+YTF   L +C+S+     G   H  ++K G     +V 
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY+  G++  AK  L+ M +    VSWN+ + GF R+   EEA+  F  M   + 
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETM-EDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362

Query: 418 ACDEFTYSSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
             D++T+ S+L  C   S+ P     + +H  I+K+ FE+   V ++L++ Y K G  + 
Sbjct: 363 KIDDYTFPSVLNCCVVGSINP-----KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDC 417

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  VF ++   DV+SW S++  Y+QN    +++ +F  M V G+ P      ++LSAC+ 
Sbjct: 418 AYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAE 477

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIFIS 582
             L++ G++V    +K  G+   ++ Y+ +V +  + G L+ A  IF+S
Sbjct: 478 LTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 98/250 (39%), Gaps = 67/250 (26%)

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           +A    IH+    S +ES ++  + L+   +K G   DA ++F ++   D  SWN+MI +
Sbjct: 48  MAFLRSIHTTTAAS-YES-IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISS 105

Query: 497 YSQNGR---AR----------------------------KAIILFEKMVVEGIRPTNSTF 525
           Y   GR   AR                            +A  LF  M +EG + +  T 
Sbjct: 106 YVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTL 165

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            +VL  CS  GL+Q G+ +   +VK                  G  G + +    +    
Sbjct: 166 GSVLRVCSSLGLIQTGEMIHGFVVKN-----------------GFEGNVFVVTGLVD--- 205

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
                     ++A C+C S+   AEF+ K  LE D  +  ++  +   YA+ G    A E
Sbjct: 206 ----------MYAKCKCVSE---AEFLFKG-LEFDRKNHVLWTAMVTGYAQNGDGYKAVE 251

Query: 646 QRKLMKMKEI 655
             + M  + +
Sbjct: 252 FFRYMHAQGV 261


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/706 (34%), Positives = 379/706 (53%), Gaps = 28/706 (3%)

Query: 58  RAGLSTSDLIFNGYM---NIEEKGISRNGYSTRN----DSFPDGFIDDGCSNTVPVTCYS 110
           RA +     + + YM    +E+  +   G   RN     S   G++     + V    + 
Sbjct: 132 RAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFR 191

Query: 111 L--ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
           +  E +    F    VLS  + +  ++LGRR HA   K       FV  SL+NMY+KCG 
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGL 251

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++   AV +QM   D+ S N L+AG   N    +A   F        + +  TYST++ +
Sbjct: 252 VEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKL 311

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVIS 286
           C +L  +   +QLH+  +K  + S   V  A++  Y KCG ++DA ++F  +   +NV+S
Sbjct: 312 CANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVS 371

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WTA+I G  Q+ D      L   MRED + PNE+T++  L +   +    +    HAQ+I
Sbjct: 372 WTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQII 427

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K        VGTA++  YS LG   EA    K M      V+W+A ++ + +    + A 
Sbjct: 428 KTNYQHAPSVGTALLASYSKLGNTEEALSIFK-MIDHKDVVAWSAMLSCYSQAGDCDGAT 486

Query: 407 EAFSQMVRNDAACDEFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
             F +M       +EFT SS + AC S    +    Q H+  +K +++  + VGS+L+  
Sbjct: 487 NVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTM 546

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y + GS + A  VF + T  D+VSWNSMI  Y+Q+G +++A+  F +M   GI    +TF
Sbjct: 547 YARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATF 606

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           LAV+  C+H+GLV++GQ+ F+SMV ++ I P   HYSCMVDL  RAGKL+  +  I  +P
Sbjct: 607 LAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMP 666

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
               A +WR L  ACR H ++++ +  ++++L L+PDD+A YV LSN+YA AG   + +E
Sbjct: 667 FPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDE 726

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            RKLM  K++ KE GCSWI++ NK++ F + +KSH    ++Y KLK +  +++  G+  N
Sbjct: 727 VRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPN 786

Query: 706 -----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                      +KE  ++ HSERLA+ FGLI+ P +   +  + L 
Sbjct: 787 TSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLR 832



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 235/450 (52%), Gaps = 15/450 (3%)

Query: 136 GRRYHALITKTAVCG----DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           G + H L  K   CG    +  V  +LV+MY KCG ++    V + MP  ++ +   LL 
Sbjct: 118 GEQLHCLCVK---CGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLT 174

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           GY +        + F ++    V PN +T++++L+   S  A+D G+++HAQ++K    S
Sbjct: 175 GYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRS 234

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V N+L+ MY KCG++E+A++VF  +  R+++SW  ++ G   +    + L+L    R
Sbjct: 235 TVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSR 294

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
                 ++ T++  +  CA+L+   +    H+ V+K G      V TAI+D YS  GE+ 
Sbjct: 295 ASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELD 354

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A      M  S + VSW A I G  +N     A   FS+M  ++   +EFTYS++L A 
Sbjct: 355 DAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTAS 414

Query: 432 --SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
              LLP      QIH++I+K+ ++    VG++L+ +Y+K G+ E+A  +F  +   DVV+
Sbjct: 415 IPILLP------QIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVA 468

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W++M+  YSQ G    A  +F KM ++G++P   T  + + AC+      D  + F ++ 
Sbjct: 469 WSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAIS 528

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
            +Y         S +V +  R G ++ A I
Sbjct: 529 IKYRYQDAICVGSALVTMYARKGSIDSARI 558


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/621 (34%), Positives = 335/621 (53%), Gaps = 12/621 (1%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           EC EL    HA I K     + FV  +L++ YA CG + S       +   D+ S   ++
Sbjct: 55  ECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMV 114

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           A YA+N  F  +   F ++  +   PNH+T++ +L  C  L A   GK +H   +K  Y 
Sbjct: 115 ACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYE 174

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
               V   LL +Y K G   D   VFE + + +VI W+ +I+ + Q     + + L   M
Sbjct: 175 MDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQM 234

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           R   + PN++TF   L SCAS+ N  +G   H  V+K G+    FV  A++D+Y+  G +
Sbjct: 235 RRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRL 294

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
             + K   E+  + + V+WN  I G+ ++   ++A+  +  M+       E TYSS+L+A
Sbjct: 295 DNSMKLFMEL-PNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRA 353

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+ L ++    QIHS  +K+ ++ +V VG++LI+ Y KCGS ++A  VF  L+  D +SW
Sbjct: 354 CASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISW 413

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N+MI  YS +G   +A+  F+ M      P   TF+++LSACS++GL+  GQ  F+SMV+
Sbjct: 414 NAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQ 473

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           +YGI P   HY+CMV LLGR+G L+ A+  I  +P++P   +WR L  AC  H+D+ +  
Sbjct: 474 DYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGI 533

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             ++QIL++DP D A +V LSN+YA           RK MK K + KEPG SWIE    +
Sbjct: 534 MSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIV 593

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLA 719
           + F   + SH +M  +   L+ L  + E  G+            D+EK+  +  HSERLA
Sbjct: 594 HYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLA 653

Query: 720 VGFGLISLPAKNKFECSRTLE 740
           + FGLI  P++      + L 
Sbjct: 654 LAFGLIRTPSRGHIRILKNLR 674



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 198/367 (53%), Gaps = 1/367 (0%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  +  S   L+ GY ++   D+    F ++     + N + ++T+L +  S+   +  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
             LHA   KL + S   V  AL+  Y  CG +  A   F+ +  ++++SWT ++  + ++
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             ++  L+L   MR  G +PN +TF   L +C  L    +G   H  V+K    +  +VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             ++D+Y+  G+  +  +  +EM K    + W+  I+ + ++ ++ EA+E F QM R   
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKH-DVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++FT++S+L++C+ + +L   +Q+H  ++K   + NV V ++L++ Y KCG  +++ +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F +L   + V+WN+MI  Y Q+G   KA+ L++ M+   ++ +  T+ +VL AC+    
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 538 VQDGQKV 544
           ++ G ++
Sbjct: 360 MELGTQI 366



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C   E   +G+  H  + KT    D +V   L+++Y K GD   ++ V ++MP  D
Sbjct: 148 VLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHD 207

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   + +++ YA++    +A   F ++    V PN +T++++L  C S+  +  GKQ+H 
Sbjct: 208 VIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHC 267

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+       VSNAL+ +Y KCG ++++  +F  L  RN ++W  +I G+ Q GD +K
Sbjct: 268 HVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDK 327

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M E  +  +E T++  L +CASL    +G   H+  +K        VG A++D
Sbjct: 328 ALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALID 387

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G I  A+    +M      +SWNA I+G+  +    EA++AF  M   +   ++ 
Sbjct: 388 MYAKCGSIKNARLVF-DMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKL 446

Query: 423 TYSSILKACS 432
           T+ SIL ACS
Sbjct: 447 TFVSILSACS 456



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 168/314 (53%), Gaps = 5/314 (1%)

Query: 114 LLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           +L  QF    VL  C+  E L+LG++ H  + K  + G+ FV+ +L+++YAKCG + + +
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +  ++P  +  + N ++ GY ++   D+A S +  +    VQ +  TYS++L  C SL+
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A++ G Q+H+ ++K  Y     V NAL+ MY KCG +++A  VF+ L +R+ ISW A+I+
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM 350
           G+  HG   + L+   +M+E    PN+ TF   L++C  A L +    Y F + V   G+
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNY-FKSMVQDYGI 477

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                  T +V +    G + +A K ++E+    +   W A +     +   +  I +  
Sbjct: 478 EPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQ 537

Query: 411 QMVRNDAACDEFTY 424
           Q+++ D   DE T+
Sbjct: 538 QILQIDPQ-DEATH 550


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 245/699 (35%), Positives = 373/699 (53%), Gaps = 41/699 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF++ PKR  +S + LI +GY  +         Y    + F +  + D         
Sbjct: 73  AKKLFDRMPKRNVVSWNSLI-SGYTQM-------GFYHEVMNLFKEARMSD--------- 115

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                  LDK      LS C R   L LGR  HALIT + + G   +T SL++MY KCG 
Sbjct: 116 -----LRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGR 170

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I     V +    LD  S N L+AGY +    D+     +K+    +  N Y   + L  
Sbjct: 171 IDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKA 230

Query: 228 CGS--LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
           CGS   S+I+ GK LH   +KL       V  ALL  Y K G +EDA  +F+ +   NV+
Sbjct: 231 CGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVV 290

Query: 286 SWTAIINGFKQHGDY-----EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            + A+I GF Q          + + L   M+  G+ P+E+TF+  L +C+++     G  
Sbjct: 291 MYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQ 350

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HAQ+ K  +   +F+G A+V++YS  G I +  K      K    VSW + I G  +N 
Sbjct: 351 IHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPK-LDVVSWTSLIVGHVQNG 409

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + E  +  F +++ +    DEFT S +L AC+ L ++ + EQIH+  +K+   +   + +
Sbjct: 410 QFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN 469

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           S I  Y KCG  + A   F +    D+VSW+ MI + +Q+G A++A+ LFE M   GI P
Sbjct: 470 SQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 529

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TFL VL ACSH GLV++G + FE M K++GI P   H +C+VDLLGRAG+L  A  F
Sbjct: 530 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF 589

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I +   +    +WR L +ACR H      + ++++++EL+P+ AA YV L N+Y +AG+Q
Sbjct: 590 IMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQ 649

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
             A E R LMK + + KEPG SWIEV N ++ F + ++SH     +Y +L++++++I+ +
Sbjct: 650 MPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKL 709

Query: 701 GHTD-----------NEKEDRVLYHSERLAVGFGLISLP 728
            + D           ++    V YHSE+LAV FG+ISLP
Sbjct: 710 DYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLP 748



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 236/449 (52%), Gaps = 8/449 (1%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           Y L   LD     +++   +R   L  G+  H  + KT      F+  +L+ MY KCG+ 
Sbjct: 11  YYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGET 70

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                +  +MP  ++ S N L++GY +   + +  + F +    D++ + +T+S  L++C
Sbjct: 71  DVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
           G    +  G+ +HA            ++N+L+ MY KCG ++ A  VFE   + + +SW 
Sbjct: 131 GRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWN 190

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM--GYMFHAQVI 346
           ++I G+ + G  ++ LRL+  M   G++ N Y    AL +C S  +S +  G M H   +
Sbjct: 191 SLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----NQK 401
           K G+ L   VGTA++D Y+ +G++ +A K  K M    + V +NA IAGF +     ++ 
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLM-PDPNVVMYNAMIAGFLQMETMADEF 309

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EA+  F +M        EFT+SSILKACS + +    +QIH++I K   +S+  +G++
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L+E Y+  GS ED  + F      DVVSW S+I  + QNG+    + LF +++  G +P 
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             T   +LSAC++   V+ G+++    +K
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIK 458



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 197/392 (50%), Gaps = 16/392 (4%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           Q +   L LD +       TY+ ++       ++  GK  H   +K  +     + N LL
Sbjct: 9   QPYYLGLPLDSV-------TYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLL 61

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            MY KCG  + A+ +F+ + +RNV+SW ++I+G+ Q G Y + + L    R   +  +++
Sbjct: 62  YMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKF 121

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF+ AL+ C    +  +G + HA +   G+     +  +++DMY   G I +  + + E 
Sbjct: 122 TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRI-DWARLVFES 180

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC--SLLPSLA 438
                SVSWN+ IAG+ R    +E +    +M+R+    + +   S LKAC  +   S+ 
Sbjct: 181 ADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIE 240

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             + +H   VK   + +V VG++L++ Y K G  EDA ++F  +   +VV +N+MI  + 
Sbjct: 241 CGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFL 300

Query: 499 Q-----NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           Q     +  A +A+ LF +M   G++P+  TF ++L ACS     + G+++   + K Y 
Sbjct: 301 QMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YN 359

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +  +E   + +V+L   +G +E  L    + P
Sbjct: 360 LQSDEFIGNALVELYSLSGSIEDGLKCFHSTP 391



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 102/199 (51%), Gaps = 5/199 (2%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  TY+ +++  +   SL   +  H  ++K+ F+  + + ++L+  Y KCG  + A+++F
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   +VVSWNS+I  Y+Q G   + + LF++  +  +R    TF   LS C  +  ++
Sbjct: 78  DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIFISNLPIKPTAPIWRPLFA 598
            G ++  +++   G+       + ++D+  + G+++ A L+F S   +   +  W  L A
Sbjct: 138 LG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVS--WNSLIA 194

Query: 599 A-CRCHSDLKMAEFISKQI 616
              R  S+ +M   + K +
Sbjct: 195 GYVRIGSNDEMLRLLVKML 213


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 235/692 (33%), Positives = 379/692 (54%), Gaps = 34/692 (4%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F+    R G+S + LI          G+ + G+S R          D     +  
Sbjct: 314 SAERIFSTMNSRDGVSYNSLI---------SGLVQQGFSDRALELFTKMQRD----CLKP 360

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            C ++ SLL         S C+    L  G + H+   K  +  D  +  SL+++Y+KC 
Sbjct: 361 DCITVASLL---------SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCA 411

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           D+++           +I   N +L  Y +      +F  F ++    + PN +TY ++L 
Sbjct: 412 DVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILR 471

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C SL A+  G+Q+H   +K  +     V + L+ MY K G +  A  +   L + +V+S
Sbjct: 472 TCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS 531

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WTA+I G+ QH  + + L+L   M   GI  +   F  A+++CA +R    G   HAQ  
Sbjct: 532 WTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSY 591

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
             G      +  A++ +Y+  G I EA    +++G   +++SWN+ ++G  ++   EEA+
Sbjct: 592 AAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDK-NNISWNSLVSGLAQSGYFEEAL 650

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F +M+R +A  + FTY S + A + L ++   +QIHS ++K+ ++S   V +SLI  Y
Sbjct: 651 QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K GS  DA R F+ ++  +V+SWN+MI  YSQ+G   +A+ LFE+M V GI P + TF+
Sbjct: 711 AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
            VLSACSH GLV++G   FESM K + ++P+  HY C+VDLLGRAG+L+ A+ +I  +PI
Sbjct: 771 GVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
              A IWR L +AC  H ++++ E  +  +LEL+P+D+A YV +SN+YA +      +  
Sbjct: 831 PADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWS 890

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD-- 704
           RKLMK   + KEPG SWIEV N ++ F++ +K H    ++YE +  L ++  +IG+    
Sbjct: 891 RKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950

Query: 705 ----NEKE----DRVLY-HSERLAVGFGLISL 727
               NE E    D + + HSE+LA+ FGL+SL
Sbjct: 951 FSLLNESEQGQKDPITHVHSEKLAIAFGLLSL 982



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 233/476 (48%), Gaps = 9/476 (1%)

Query: 130 EECLELGR-----RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
           E CL  G      R H  I+K+   G+  +  SLV+ Y + GD    V V  +     + 
Sbjct: 66  EGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVF 125

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQ 243
           S N ++  +       Q F  F ++    + PN YT++ +L  C G   A +  KQ+H++
Sbjct: 126 SWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSR 185

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
           T    + S   V+N L+ +Y K G +E A+ VF  +  +++++W A+I+G  Q+G  E+ 
Sbjct: 186 TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEA 245

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L C M    I P  Y  +  L++   ++   +G   H  VIK G     +V   +V +
Sbjct: 246 ILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVAL 305

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS   ++  A++    M  S   VS+N+ I+G  +   ++ A+E F++M R+    D  T
Sbjct: 306 YSRSRKLISAERIFSTM-NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCIT 364

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +S+L AC+ + +L    Q+HS  +K+   +++ +  SL++ Y+KC   E A + F    
Sbjct: 365 VASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTE 424

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++V WN M+ AY Q      +  +F +M +EG+ P   T+ ++L  C+  G +  G++
Sbjct: 425 TENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQ 484

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +   ++K  G        S ++D+  + G+L +AL  +  LP       W  + A 
Sbjct: 485 IHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVS-WTAMIAG 538



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 258/544 (47%), Gaps = 33/544 (6%)

Query: 52  FNKSPKRAGLSTSDLIFNGYMNIEEK------------------GISRNGYSTRNDSFPD 93
           F+ SP  A L       NGY+   +K                  G+S+NG          
Sbjct: 191 FDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILL-- 248

Query: 94  GFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
            F D   S   P T Y L S         VLS  ++ +  ELG + H L+ K     + +
Sbjct: 249 -FCDMHASEIFP-TPYVLSS---------VLSASTKIQLFELGEQLHCLVIKWGFHSETY 297

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V   LV +Y++   + S   +   M   D  S N L++G  +    D+A   F K+    
Sbjct: 298 VCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDC 357

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P+  T +++L+ C S+ A+ +G QLH+  +K    +   +  +LL +Y KC  +E A 
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
             F      N++ W  ++  + Q  +      +   M+ +G+ PN++T+   L +C SL 
Sbjct: 418 KFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
             ++G   H  VIK G  L  +V + ++DMY+  G++  A + L+ + +    VSW A I
Sbjct: 478 ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPED-DVVSWTAMI 536

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AG+ ++    EA++ F +M       D   ++S + AC+ + +L   +QIH++   + F 
Sbjct: 537 AGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFG 596

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           +++ + ++LI  Y +CG  ++A   F ++   + +SWNS++   +Q+G   +A+ +F +M
Sbjct: 597 ADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRM 656

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +         T+ + +SA +    ++ GQ++  SMV + G   E    + ++ L  ++G 
Sbjct: 657 LRTEAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGS 715

Query: 574 LEIA 577
           +  A
Sbjct: 716 ISDA 719



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 176/374 (47%), Gaps = 15/374 (4%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V+ N+  Y  +L  C +  ++ E  +LH +  K  +  +  + ++L+  Y + G    A 
Sbjct: 54  VRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAV 113

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALASCA 330
            VF+    R+V SW  +I+ F      +   ++ CL R    +GI PN YTF   L +C 
Sbjct: 114 KVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFCLFRRMLAEGITPNGYTFAGVLKACV 170

Query: 331 SLRNSHMGYMFHAQVIKRGMALG----DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
                 + + +  QV  R    G      V   ++D+YS  G I  AKK    +      
Sbjct: 171 G---GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMK-DI 226

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V+W A I+G  +N   EEAI  F  M  ++     +  SS+L A + +      EQ+H  
Sbjct: 227 VTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCL 286

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           ++K  F S  +V + L+  Y++      AER+FS + + D VS+NS+I    Q G + +A
Sbjct: 287 VIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRA 346

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF KM  + ++P   T  ++LSAC+  G +  G ++    +K  G+  +      ++D
Sbjct: 347 LELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKA-GMSADIILEGSLLD 405

Query: 567 LLGRAGKLEIALIF 580
           L  +   +E A  F
Sbjct: 406 LYSKCADVETAHKF 419


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/632 (36%), Positives = 356/632 (56%), Gaps = 20/632 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  + +  L+LG+R HA   K       FV  SL+NMYAKCG ++   +V   M   D
Sbjct: 207 VLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRD 266

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AG   N    +A   F +      +    TY+T++ +C +L  +   +QLH+
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYE 301
             +K  +     V  AL   Y KCG + DA ++F      RNV+SWTAII+G  Q+GD  
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             + L   MRED + PNE+T++  L +  S+    +    HAQVIK        VGTA++
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALL 442

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
             YS  G   +A    K M +    V+W+A ++   +    E A   F++M       +E
Sbjct: 443 ASYSKFGSTEDALSIFK-MIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNE 501

Query: 422 FTYSSILKACSLLPSLATCE--QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           FT SS++ AC+  PS    +  Q H+  +K ++   + V S+L+  Y++ G+ + A+ VF
Sbjct: 502 FTISSVIDACAC-PSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVF 560

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            + T  D+VSWNSMI  Y+Q+G + KAI  F +M   GI+    TFLAV+  C+H+GLV 
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVV 620

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +GQ+ F+SMV+++ I P   HY+CMVDL  RAGKL+  +  I ++P    A +WR L  A
Sbjct: 621 EGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H ++++ +F + ++L L+P D++ YV LSN+YA AG   + +E RKLM  +++ KE 
Sbjct: 681 CRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEA 740

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKE 708
           GCSWI++ NK++ F + +KSH    ++Y+KLK ++ +++  G++ N           +KE
Sbjct: 741 GCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKE 800

Query: 709 DRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             ++ HSERLA+ FGLI+ P     +  + L 
Sbjct: 801 AMLVAHSERLALAFGLIATPPGTPLQIVKNLR 832



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/468 (30%), Positives = 244/468 (52%), Gaps = 7/468 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMV 172
           L+D   +  VL  C       LG + H L  K     G+     SLV+MY KCG +   +
Sbjct: 96  LVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGI 155

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            V + MP  ++ +   LL G A   +  +  + F ++    + PN +T++++L+   S  
Sbjct: 156 EVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQG 215

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+D G+++HAQ++K    S   V N+L+ MY KCG++EDA+SVF  +  R+++SW  ++ 
Sbjct: 216 ALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMA 275

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G + +    + L+L    R       + T+   +  CA+L+   +    H+ V+K G  L
Sbjct: 276 GLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHL 335

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V TA+ D YS  GE+ +A         S + VSW A I+G  +N     A+  FS+M
Sbjct: 336 TGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRM 395

Query: 413 VRNDAACDEFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
             +    +EFTYS++LKA  S+LP      QIH++++K+ ++    VG++L+ +Y+K GS
Sbjct: 396 REDRVMPNEFTYSAMLKASLSILP-----PQIHAQVIKTNYQHIPSVGTALLASYSKFGS 450

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            EDA  +F  +   DVV+W++M+  ++Q G    A  LF KM ++GI+P   T  +V+ A
Sbjct: 451 TEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDA 510

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           C+      D  + F ++  +Y         S +V +  R G ++ A I
Sbjct: 511 CACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 1/179 (0%)

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+  L E+ +  ++V  N  +  + R     E ++ FS   R     D  T S +LKAC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 433 LLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            +P     EQ+H   VK   +   V  G+SL++ Y KCGS  +   VF  +   +VV+W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           S++   +      + + LF +M  EGI P   TF +VLSA +  G +  GQ+V    VK
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 231/632 (36%), Positives = 349/632 (55%), Gaps = 19/632 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LDK      LS C R   L LGR  HALIT + + G   +T SL++MY KCG I     V
Sbjct: 39  LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLV 98

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS--LS 232
            +    LD  S N L+AGY +    D+     +K+    +  N Y   + L  CGS   S
Sbjct: 99  FESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSS 158

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +I+ GK LH   +KL       V  ALL  Y K G +EDA  +F+ +   NV+ + A+I 
Sbjct: 159 SIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIA 218

Query: 293 GFKQHGDY-----EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           GF Q          + + L   M+  G+ P+E+TF+  L +C+++     G   HAQ+ K
Sbjct: 219 GFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK 278

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +   +F+G A+V++YS  G I +  K      K    VSW + I G  +N + E  + 
Sbjct: 279 YNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPK-LDVVSWTSLIVGHVQNGQFEGGLT 337

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +++ +    DEFT S +L AC+ L ++ + EQIH+  +K+   +   + +S I  Y 
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG  + A   F +    D+VSW+ MI + +Q+G A++A+ LFE M   GI P + TFL 
Sbjct: 398 KCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLG 457

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL ACSH GLV++G + FE M K++GI P   H +C+VDLLGRAG+L  A  FI +   +
Sbjct: 458 VLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFE 517

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +WR L +ACR H      + ++++++EL+P+ AA YV L N+Y +AG+Q  A E R
Sbjct: 518 GDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIR 577

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD--- 704
            LMK + + KEPG SWIEV N ++ F + ++SH     +Y +L++++++I+ + + D   
Sbjct: 578 NLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKL 637

Query: 705 --------NEKEDRVLYHSERLAVGFGLISLP 728
                   ++    V YHSE+LAV FG+ISLP
Sbjct: 638 VSDASEPKHKDNSMVSYHSEKLAVTFGIISLP 669



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 207/380 (54%), Gaps = 8/380 (2%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  ++ S N L++GY +   + +  + F +    D++ + +T+S  L++CG    +  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + +HA            ++N+L+ MY KCG ++ A  VFE   + + +SW ++I G+ + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM--GYMFHAQVIKRGMALGDF 355
           G  ++ LRL+  M   G++ N Y    AL +C S  +S +  G M H   +K G+ L   
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----NQKTEEAIEAFS 410
           VGTA++D Y+ +G++ +A K  K M    + V +NA IAGF +     ++   EA+  F 
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLM-PDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +M        EFT+SSILKACS + +    +QIH++I K   +S+  +G++L+E Y+  G
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S ED  + F      DVVSW S+I  + QNG+    + LF +++  G +P   T   +LS
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359

Query: 531 ACSHSGLVQDGQKVFESMVK 550
           AC++   V+ G+++    +K
Sbjct: 360 ACANLAAVKSGEQIHAYAIK 379



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 9/312 (2%)

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RNV+SW ++I+G+ Q G Y + + L    R   +  +++TF+ AL+ C    +  +G +
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA +   G+     +  +++DMY   G I +  + + E      SVSWN+ IAG+ R  
Sbjct: 63  IHALITVSGLGGPVLLTNSLIDMYCKCGRI-DWARLVFESADELDSVSWNSLIAGYVRIG 121

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKAC--SLLPSLATCEQIHSRIVKSKFESNVHV 458
             +E +    +M+R+    + +   S LKAC  +   S+   + +H   VK   + +V V
Sbjct: 122 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 181

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ-----NGRARKAIILFEKM 513
           G++L++ Y K G  EDA ++F  +   +VV +N+MI  + Q     +  A +A+ LF +M
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
              G++P+  TF ++L ACS     + G+++   + K Y +  +E   + +V+L   +G 
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGS 300

Query: 574 LEIALIFISNLP 585
           +E  L    + P
Sbjct: 301 IEDGLKCFHSTP 312


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/620 (36%), Positives = 346/620 (55%), Gaps = 20/620 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  + +  ++LGRR HA   K   C   FV  SL+NMYAKCG ++    V   M   D
Sbjct: 211 VLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRD 270

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AG   N    +A   F             TY+T++ +C ++  +   +QLH+
Sbjct: 271 MVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHS 330

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYE 301
             +K  + S   V  AL+  Y K G + +A  +F  +   +NV+SWTA+ING  Q+GD  
Sbjct: 331 SVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390

Query: 302 KPLRLVCLMREDGIDPNEYTF-TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
               L   MREDG+ PN++T+ T+  AS ASL         HAQVIK        VGTA+
Sbjct: 391 LAAALFSRMREDGVAPNDFTYSTILTASVASLPPQ-----IHAQVIKTNYECTSIVGTAL 445

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +  YS L    EA    K M      VSW+A +  + +   ++ A   F +M  +    +
Sbjct: 446 LASYSKLCNTEEALSIFK-MIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPN 504

Query: 421 EFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           EFT SS++ AC S    +    Q H+  +K +    + V S+L+  Y + GS E A+ +F
Sbjct: 505 EFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIF 564

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            + T  D+VSWNSM+  Y+Q+G ++KA+ +F +M  EGI     TFL+V+  C+H+GLV+
Sbjct: 565 ERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVE 624

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +GQ+ F+SM ++YGI P   HY+CMVDL  RAGKL+ A+  I  +       +WR L  A
Sbjct: 625 EGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGA 684

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H ++++ +  ++++L L+P D+A YV LSN+Y+ AG   + +E RKLM  K++ KE 
Sbjct: 685 CKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEA 744

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKE 708
           GCSWI++ NK++ F + +KSH    ++Y KL+ +  +++  G+            + +KE
Sbjct: 745 GCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEVAEEQKE 804

Query: 709 DRVLYHSERLAVGFGLISLP 728
             +  HSERLA+ FGLI+ P
Sbjct: 805 AMLAMHSERLALAFGLIATP 824



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 234/461 (50%), Gaps = 9/461 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++ VL  C       LG++ H L  +     GD  V  SLV+MY K   +     V + M
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM 165

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  ++ +   LL GY ++         F ++    V PN  T++++L++  S   +D G+
Sbjct: 166 PKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGR 225

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++HAQ++K    S   V N+L+ MY KCG++E+A  VF G+  R+++SW  ++ G   +G
Sbjct: 226 RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L+L    R       + T+   +  CA+++   +    H+ V+KRG      V T
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D YS  G++  A      M  S + VSW A I G  +N     A   FS+M  +  A
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405

Query: 419 CDEFTYSSILKA--CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
            ++FTYS+IL A   SL P      QIH++++K+ +E    VG++L+ +Y+K  + E+A 
Sbjct: 406 PNDFTYSTILTASVASLPP------QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEAL 459

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F  +   DVVSW++M+  Y+Q G +  A  +F KM + G++P   T  +V+ AC+   
Sbjct: 460 SIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPT 519

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              D  + F ++  ++         S +V +  R G +E A
Sbjct: 520 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA 560


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 223/661 (33%), Positives = 367/661 (55%), Gaps = 22/661 (3%)

Query: 79  ISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRR 138
           ISR+      +S  + F +   S   P  C ++ SLL         + C+    L  G++
Sbjct: 216 ISRHAQCGNGESALEIFEEMRLSGWTP-DCVTIASLL---------AACASIGDLNKGKQ 265

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H+ + K  +  D  +  SL+++Y KCG I   + + K     ++   N +L  Y + + 
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             ++F  F ++    V+PN +TY  +L  C     I+ G+Q+H  ++K  + S   VS  
Sbjct: 326 LAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGV 385

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY K G ++ A  + E L  ++V+SWT++I G+ QH   ++ L     M+  GI P+
Sbjct: 386 LIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
                 A+++CA ++    G   H++V   G +    +  A+V++Y+  G   EA   L 
Sbjct: 446 NIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAF-SLF 504

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E  +    ++WN  ++GF ++   EEA+E F +M +     + FT+ S + A + L  + 
Sbjct: 505 EAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIK 564

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             +QIH+ ++K+   S   V ++LI  Y KCGS EDA+  F +++  + VSWN++I + S
Sbjct: 565 QGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCS 624

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+G   +A+ LF++M  EG++P + TF+ VL+ACSH GLV++G   F+SM  E+GI P  
Sbjct: 625 QHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRP 684

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+C+VD+LGRAG+L+ A  F+  +P+   A +WR L +ACR H ++++ E  +K +LE
Sbjct: 685 DHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLE 744

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+P D+A YV LSN YA  G  A  +  RK+MK + + KEPG SWIEV N ++ FF  ++
Sbjct: 745 LEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDR 804

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---VLYHSERLAVGFGLISL 727
            H    ++Y+ L  L  ++  IG+         + EKE +      HSE+LAV FGL+SL
Sbjct: 805 LHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSL 864

Query: 728 P 728
           P
Sbjct: 865 P 865



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 257/505 (50%), Gaps = 13/505 (2%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           CS  VP T Y L S         VLS C++    E GR  HA + K   C +  V  +L+
Sbjct: 136 CSGVVP-TPYVLSS---------VLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALI 185

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
            +Y + G +     V  +MPY D  + N L++ +A+    + A   F ++      P+  
Sbjct: 186 ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T +++LA C S+  +++GKQLH+  +K        +  +LL +Y+KCG++ +A  +F+  
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            + NV+ W  ++  + Q  D  K   L C M   G+ PNE+T+   L +C      ++G 
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H   IK G     +V   ++DMYS  G + +A++ L E+ ++   VSW + IAG+ ++
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL-EVLEAKDVVSWTSMIAGYVQH 424

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           +  +EA+E F  M       D    +S + AC+ + ++   +QIHSR+  S + ++V + 
Sbjct: 425 EFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIW 484

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  Y +CG  ++A  +F  +   D ++WN M+  ++Q+G   +A+ +F KM   G++
Sbjct: 485 NALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVK 544

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               TF++ +SA ++   ++ G+++  +++K  G   E    + ++ L G+ G +E A +
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKM 603

Query: 580 FISNLPIKPTAPIWRPLFAACRCHS 604
               +  +     W  +  +C  H 
Sbjct: 604 QFFEMSERNHVS-WNTIITSCSQHG 627



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 226/433 (52%), Gaps = 5/433 (1%)

Query: 144 TKTAVCG---DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
            K   CG   D+     L+++YAK G ++    V +Q+   D  S   +L+GYA+N L +
Sbjct: 66  AKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGE 125

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +A   + ++    V P  Y  S++L+ C   +  ++G+ +HAQ  K    S+T V NAL+
Sbjct: 126 EAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALI 185

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            +Y++ G +  AE VF  +   + +++  +I+   Q G+ E  L +   MR  G  P+  
Sbjct: 186 ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    LA+CAS+ + + G   H+ ++K GM+    +  +++D+Y   G I EA +  K  
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS- 304

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
           G   + V WN  +  + +     ++ + F QMV      +EFTY  +L+ C+    +   
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           EQIH   +K+ FES+++V   LI+ Y+K G  + A R+   L A DVVSW SMI  Y Q+
Sbjct: 365 EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQH 424

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
              ++A+  F+ M + GI P N    + +SAC+    ++ GQ++  S V   G   + + 
Sbjct: 425 EFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQI-HSRVYVSGYSADVSI 483

Query: 561 YSCMVDLLGRAGK 573
           ++ +V+L  R G+
Sbjct: 484 WNALVNLYARCGR 496



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 196/410 (47%), Gaps = 8/410 (1%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA+ +           N L+ +Y K G+++ A  VFE L  R+ +SW A+++G+ ++G 
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+ + L   M   G+ P  Y  +  L++C        G + HAQV K+G      VG A
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ +Y   G +  A++   EM      V++N  I+   +    E A+E F +M  +    
Sbjct: 184 LIALYLRFGSLSLAERVFSEM-PYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  T +S+L AC+ +  L   +Q+HS ++K+    +  +  SL++ Y KCG   +A  +F
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
                 +VV WN M+ AY Q     K+  LF +MV  G+RP   T+  +L  C+++G + 
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+++    +K  G   +      ++D+  + G L+ A   +  L  K     W  + A 
Sbjct: 363 LGEQIHLLSIKT-GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVS-WTSMIAG 420

Query: 600 CRCHSDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
              H   K A   F   Q+  + PD+  +   +S   A AG++A  + Q+
Sbjct: 421 YVQHEFCKEALETFKDMQLFGIWPDNIGLASAIS---ACAGIKAMRQGQQ 467



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC-ASLRNSHM 337
           + +R   S    + GF  H D EK L L               F  AL  C  S+++  +
Sbjct: 1   MTRRAAASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPL 60

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
             + HA+ I  G+      G  ++D+Y+  G +  A++  +++  +  +VSW A ++G+ 
Sbjct: 61  VPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL-SARDNVSWVAMLSGYA 119

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           RN   EEA+  + QM  +      +  SS+L AC+          +H+++ K    S   
Sbjct: 120 RNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG++LI  Y + GS   AERVFS++   D V++N++I  ++Q G    A+ +FE+M + G
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             P   T  ++L+AC+  G +  G+++   ++K  G+ P+      ++DL  + G +  A
Sbjct: 240 WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEA 298

Query: 578 L-IFISNLPIKPTAPIWRPLFAACRCHSDL 606
           L IF S    +    +W  +  A    SDL
Sbjct: 299 LEIFKSG--DRTNVVLWNLMLVAYGQISDL 326


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/597 (35%), Positives = 341/597 (57%), Gaps = 17/597 (2%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           +L+ +YAKCG I   + +    P+   ++ +   L+   +++    QA +FF ++    +
Sbjct: 137 TLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGI 196

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            PNH+T+S +L  C   + + EG+Q+HA   K  +L+   V+ ALL MY KCG M  AE+
Sbjct: 197 YPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAEN 256

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLR 333
           VF+ +  RN++SW ++I GF ++  Y    R + + RE   + P++ + +  L++CA L 
Sbjct: 257 VFDEMPHRNLVSWNSMIVGFVKNKLYG---RAIGVFREVLSLGPDQVSISSVLSACAGLV 313

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
               G   H  ++KRG+    +V  ++VDMY   G ++E   +L   G     V+WN  I
Sbjct: 314 ELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCG-LFEDATKLFCGGGDRDVVTWNVMI 372

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G FR +  E+A   F  M+R     DE +YSS+  A + + +L     IHS ++K+   
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N  + SSL+  Y KCGS  DA +VF +    +VV W +MI  + Q+G A +AI LFE+M
Sbjct: 433 KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM 492

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           + EG+ P   TF++VLSACSH+G + DG K F SM   + I P   HY+CMVDLLGR G+
Sbjct: 493 LNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGR 552

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           LE A  FI ++P +P + +W  L  AC  H++++M   +++++ +L+PD+   Y+ LSN+
Sbjct: 553 LEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNI 612

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           Y   G+  +A+E R+LM +  + KE GCSWI+V N+ + F + ++SHS   ++Y  L++L
Sbjct: 613 YIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKL 672

Query: 694 MQQIEDIGH----------TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + I+  G+           +  +E  +  HSE+LA+ FGL+ LP  +     + L 
Sbjct: 673 KELIKRRGYVAETQFATNSVEGSEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLR 729



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 218/461 (47%), Gaps = 50/461 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  G++ HALI K     D FV  +L++MYAKCG +     V  +MP+ +
Sbjct: 206 ILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRN 265

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ G+ KN L+ +A   F ++  + + P+  + S++L+ C  L  +D GKQ+H 
Sbjct: 266 LVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHG 323

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K   +    V N+L+ MY KCG+ EDA  +F G   R+V++W  +I G  +  ++E+
Sbjct: 324 SIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQ 383

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                  M  +G++P+E +++    + AS+     G M H+ V+K G      + +++V 
Sbjct: 384 ACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVT 443

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G + +A +  +E  K  + V W A I  F ++    EAI+ F +M+      +  
Sbjct: 444 MYGKCGSMLDAYQVFRET-KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYI 502

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFE-----SNVHVGSSLIEAYNKCGSWEDAER 477
           T+ S+L ACS           H+  +   F+     +NVH     +E Y  C        
Sbjct: 503 TFVSVLSACS-----------HTGKIDDGFKYFNSMANVHNIKPGLEHY-AC-------- 542

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
                          M+    + GR  +A    E M  E   P +  + A+L AC     
Sbjct: 543 ---------------MVDLLGRVGRLEEACRFIESMPFE---PDSLVWGALLGACGKHAN 584

Query: 538 VQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAGKLEIA 577
           V+ G++V E + K   + P+   +Y  + ++  R G LE A
Sbjct: 585 VEMGREVAERLFK---LEPDNPGNYMLLSNIYIRHGMLEEA 622



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 169/353 (47%), Gaps = 6/353 (1%)

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-- 281
           +L     L ++    Q+H+Q +     +  A  N LL +Y KCG +     +F       
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            NV++WT +IN   +     + L     MR  GI PN +TF+  L +CA       G   
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA + K       FV TA++DMY+  G +  A+    EM    + VSWN+ I GF +N+ 
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEM-PHRNLVSWNSMIVGFVKNKL 281

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
              AI  F +++      D+ + SS+L AC+ L  L   +Q+H  IVK      V+V +S
Sbjct: 282 YGRAIGVFREVL--SLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNS 339

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y KCG +EDA ++F      DVV+WN MI    +     +A   F+ M+ EG+ P 
Sbjct: 340 LVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPD 399

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            +++ ++  A +    +  G  +  S V + G +      S +V + G+ G +
Sbjct: 400 EASYSSLFHASASIAALTQGTMI-HSHVLKTGHVKNSRISSSLVTMYGKCGSM 451



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 150/304 (49%), Gaps = 9/304 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VLS C+    L+ G++ H  I K  + G  +V  SLV+MY KCG  +    + 
Sbjct: 298 DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLF 357

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                 D+ + N ++ G  +   F+QA ++F  +    V+P+  +YS++     S++A+ 
Sbjct: 358 CGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALT 417

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G  +H+  +K  ++  + +S++L+TMY KCG M DA  VF    + NV+ WTA+I  F 
Sbjct: 418 QGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFH 477

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-----MFHAQVIKRGM 350
           QHG   + ++L   M  +G+ P   TF   L++C+       G+     M +   IK G+
Sbjct: 478 QHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGL 537

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                    +VD+   +G + EA + ++ M     S+ W A +    ++   E   E   
Sbjct: 538 EH----YACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAE 593

Query: 411 QMVR 414
           ++ +
Sbjct: 594 RLFK 597



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--TA 484
           +L   + L SL    QIHS++V +   +++   ++L+  Y KCGS      +F+     +
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            +VV+W ++I   S++ +  +A+  F +M   GI P + TF A+L AC+H+ L+ +GQ++
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
             +++ ++  L +    + ++D+  + G + +A      +P +     W  +      + 
Sbjct: 223 -HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVS-WNSMIVGFVKNK 280

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
               A  + +++L L PD  ++   LS   A AGL
Sbjct: 281 LYGRAIGVFREVLSLGPDQVSISSVLS---ACAGL 312


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/654 (32%), Positives = 363/654 (55%), Gaps = 46/654 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C+    LE  R  H ++  + +  D  V  +L+ MY+KCG+I     + ++M  
Sbjct: 183 LSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKE 242

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ S   ++   A++   ++AF  + K+    + PN  T+ ++L  C +  A++ G+++
Sbjct: 243 RNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRI 302

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+   +    +   V+NAL+TMY KC  ++DA   F+ + +R+VISW+A+I G+ Q G  
Sbjct: 303 HSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQ 362

Query: 301 EKP-----LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +K       +L+  MR +G+ PN+ TF   L +C+       G   HA++ K G      
Sbjct: 363 DKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRS 422

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEM------------------GKSASS----------- 386
           + TAI +MY+  G I+EA++   +M                  G   S+           
Sbjct: 423 LQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRN 482

Query: 387 -VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWN  IAG+ ++    +  E  S M       D  T  SIL+AC  L +L   + +H+
Sbjct: 483 VVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHA 542

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
             VK   ES+  V +SLI  Y+KCG   +A  VF +++  D V+WN+M+  Y Q+G   +
Sbjct: 543 EAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPE 602

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ LF++M+ E + P   TF AV+SAC  +GLVQ+G+++F  M +++ + P + HY CMV
Sbjct: 603 AVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMV 662

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGRAG+L+ A  FI  +P +P   +W  L  AC+ H ++++AE+ +  IL L+P +A+
Sbjct: 663 DLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNAS 722

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
           VYVTLSN+YA+AG   D+ + RK+M  K + K+ G S IE+  +I+ F +++ +H E+  
Sbjct: 723 VYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDS 782

Query: 686 VYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           ++ +L+ L +++++ G+T +           +KE  + +HSE+LA+ +GL+  P
Sbjct: 783 IHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTP 836



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/580 (27%), Positives = 276/580 (47%), Gaps = 44/580 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++ +C++    E G+  H  + +  +  D ++  SL+N Y+K GD+ S+  V ++M   D
Sbjct: 84  IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRD 143

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + + ++A YA N    +AF  F ++   +++PN  T+ ++L  C + S +++ +++H 
Sbjct: 144 VVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHT 203

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                   +  AV+ AL+TMY KCG +  A  +F+ + +RNV+SWTAII    QH    +
Sbjct: 204 VVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNE 263

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L   M + GI PN  TF   L SC +    + G   H+ + +RG+     V  A++ 
Sbjct: 264 AFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALIT 323

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-----QKTEEAIEAFSQMVRNDA 417
           MY     I +A++    M K    +SW+A IAG+ ++     +  +E  +   +M R   
Sbjct: 324 MYCKCNCIQDARETFDRMSKR-DVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGV 382

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES----------------------- 454
             ++ T+ SILKACS+  +L    QIH+ I K  FES                       
Sbjct: 383 FPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQ 442

Query: 455 --------NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
                   NV   +SL+  Y KCG    AE+VFS+++  +VVSWN MI  Y+Q+G   K 
Sbjct: 443 VFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKV 502

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
             L   M VEG +P   T +++L AC     ++ G+ V    VK  G+  +    + ++ 
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVK-LGLESDTVVATSLIG 561

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-ELDPDDAA 625
           +  + G++  A      +  + T   W  + A    H     A  + K++L E  P +  
Sbjct: 562 MYSKCGEVTEARTVFDKISNRDTVA-WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEI 620

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLM----KMKEISKEPGC 661
            +  + +    AGL  +  E  ++M    +MK   +  GC
Sbjct: 621 TFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGC 660



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 215/453 (47%), Gaps = 13/453 (2%)

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
            +K  G+ V  N  TY  ++  C  L   ++GK +H Q  +L       + N+L+  Y K
Sbjct: 68  IIKQRGLLVNSN--TYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSK 125

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
            G +   E VF  +  R+V++W+++I  +  +    K       M++  I+PN  TF   
Sbjct: 126 FGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSI 185

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +C +          H  V   GM     V TA++ MYS  GEI  A +  ++M K  +
Sbjct: 186 LKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM-KERN 244

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSW A I    +++K  EA E + +M++   + +  T+ S+L +C+   +L    +IHS
Sbjct: 245 VVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHS 304

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I +   E++V V ++LI  Y KC   +DA   F +++  DV+SW++MI  Y+Q+G   K
Sbjct: 305 HISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDK 364

Query: 506 AII-----LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
             +     L E+M  EG+ P   TF+++L ACS  G ++ G+++   + K  G   + + 
Sbjct: 365 ESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK-VGFESDRSL 423

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + + ++  + G +  A    S +  K     W  L        DL  AE   K   E+ 
Sbjct: 424 QTAIFNMYAKCGSIYEAEQVFSKMENKNVVA-WASLLTMYIKCGDLTSAE---KVFSEMS 479

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             +   +  +   YA++G  A   E    MK++
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE 512



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 200/430 (46%), Gaps = 52/430 (12%)

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  ++ ++L+ ++++ G+  N  T+   +  CA LR    G M H Q+ + G+A+  ++G
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++++ YS  G++   ++  + M      V+W++ IA +  N    +A + F +M   + 
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRM-TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T+ SILKAC+    L    +IH+ +  S  E++V V ++LI  Y+KCG    A  
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC----- 532
           +F ++   +VVSW ++I+A +Q+ +  +A  L+EKM+  GI P   TF+++L++C     
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295

Query: 533 -----------SHSGL-------------------VQDGQKVFESMVKEYGILPEEAHYS 562
                      S  GL                   +QD ++ F+ M K   I      +S
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVI-----SWS 350

Query: 563 CMVDLLGRAG---KLEIALIF-----ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            M+    ++G   K  +  +F     +    + P    +  +  AC  H  L+    I  
Sbjct: 351 AMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHA 410

Query: 615 QILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           +I ++    D ++   + NMYA+ G   +AE+    M+ K +      S + +Y K    
Sbjct: 411 EISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV--AWASLLTMYIKCGDL 468

Query: 674 FSQNKSHSEM 683
            S  K  SEM
Sbjct: 469 TSAEKVFSEM 478



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 36/310 (11%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKT----------------AVCGDQF------ 153
           +K   + +L  CS    LE GR+ HA I+K                 A CG  +      
Sbjct: 385 NKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVF 444

Query: 154 ---------VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
                      ASL+ MY KCGD+ S   V  +M   ++ S N ++AGYA++    + F 
Sbjct: 445 SKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFE 504

Query: 205 FF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
               +K++G   QP+  T  ++L  CG+LSA++ GK +HA+ +KL   S T V+ +L+ M
Sbjct: 505 LLSSMKVEGF--QPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGM 562

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KCG + +A +VF+ +  R+ ++W A++ G+ QHG   + + L   M ++ + PNE TF
Sbjct: 563 YSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITF 622

Query: 323 TVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           T  +++C        G  +F        M  G      +VD+    G + EA++ ++ M 
Sbjct: 623 TAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMP 682

Query: 382 KSASSVSWNA 391
                  W+A
Sbjct: 683 CEPDISVWHA 692


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/588 (35%), Positives = 343/588 (58%), Gaps = 2/588 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V  VLS CS  E LE G++ HA + +     D  V   L++ Y KC  +K+   + 
Sbjct: 137 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 196

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            QM   +I S   +++GY +N+   +A   F +++ +  +P+ +  +++L  CGSL A++
Sbjct: 197 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALE 256

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA T+K    S   V N L+ MY K  ++ DA+ VF+ + ++NVIS+ A+I G+ 
Sbjct: 257 QGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYS 316

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
                 + L L   MR     P+  TF   L   ASL    +    H  +IK G++L  F
Sbjct: 317 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLF 376

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G+A++D+YS    + +A+   +EM +    V WNA   G+ ++ + EEA++ +S +  +
Sbjct: 377 AGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTLQFS 435

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EFT+++++ A S L SL   +Q H+++VK   +    V ++L++ Y KCGS E+A
Sbjct: 436 RQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 495

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F+     DVV WNSMI  ++Q+G A +A+ +F +M+ EGI+P   TF+AVLSACSH+
Sbjct: 496 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 555

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G V+DG   F SM   +GI P   HY+C+V LLGR+GKL  A  FI  +PI+P A +WR 
Sbjct: 556 GXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR   ++++ ++ ++  +  DP D+  Y+ LSN++A  G+ AD ++ R  M   E+
Sbjct: 615 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 674

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            KEPG SWIEV NK+  F ++  +H E   +   L  L+Q I+  G+ 
Sbjct: 675 VKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYV 722



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 234/461 (50%), Gaps = 3/461 (0%)

Query: 118 QFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +FV+  V+  C++   +E G + H  + ++    D +V  SL++ Y+K GBI+    V  
Sbjct: 37  EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFD 96

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           Q+      +   ++AGY K      +   F ++   +V P+ Y  S++L+ C  L  ++ 
Sbjct: 97  QLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 156

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ+HA  ++       +V N L+  Y KC  ++    +F+ +V +N+ISWT +I+G+ Q
Sbjct: 157 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 216

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +    + ++L   M   G  P+ +  T  L SC SL     G   HA  IK  +   +FV
Sbjct: 217 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFV 276

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
              ++DMY+    + +AKK    M +  + +S+NA I G+   +K  EA+E F +M    
Sbjct: 277 KNGLIDMYAKSNLLXDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRL 335

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                 T+ S+L   + L +L   +QIH  I+K     ++  GS+LI+ Y+KC   +DA 
Sbjct: 336 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDAR 395

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF ++   D+V WN+M   Y+Q+    +A+ L+  +     +P   TF A+++A S+  
Sbjct: 396 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 455

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            ++ GQ+    +VK  G+       + +VD+  + G +E A
Sbjct: 456 SLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEA 495



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 214/443 (48%), Gaps = 11/443 (2%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            PN +  ++++  C  L  +++G QLH   ++  +     V  +L+  Y K G +E A  
Sbjct: 34  HPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARL 93

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+ L+++  ++WT II G+ + G     L L   MRE  + P+ Y  +  L++C+ L  
Sbjct: 94  VFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEF 153

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   HA V++RG  +   V   ++D Y+    +   +K   +M    + +SW   I+
Sbjct: 154 LEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM-VVKNIISWTTMIS 212

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+ +N    EA++ F +M R     D F  +S+L +C  L +L    Q+H+  +K+  ES
Sbjct: 213 GYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLES 272

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N  V + LI+ Y K     DA++VF  +   +V+S+N+MI+ YS   +  +A+ LF +M 
Sbjct: 273 NEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMR 332

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           V    P+  TF+++L   S S    +  K    ++ + G+  +    S ++D+  +   +
Sbjct: 333 VRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYV 391

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDD---AAVYVT 629
           + A      +  K    +W  +F     H  ++  +  + + Q     P++   AA+   
Sbjct: 392 KDARHVFEEMNEKDIV-VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITA 450

Query: 630 LSNMYAEAGLQADAEEQRKLMKM 652
            SN+   A L+   +   +L+KM
Sbjct: 451 ASNL---ASLRHGQQFHNQLVKM 470



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 190/431 (44%), Gaps = 56/431 (12%)

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  +  V L R+ G  PNE+     + +C  L     G   H  V++ G     +VGT++
Sbjct: 19  EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 78

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D YS  G+I  A+    ++ +  ++V+W   IAG+ +  ++  ++E F+QM   +   D
Sbjct: 79  IDFYSKNGBIEVARLVFDQLLEK-TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            +  SS+L ACS+L  L   +QIH+ +++   E +V V + LI+ Y KC   +   ++F 
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-------- 532
           Q+   +++SW +MI  Y QN    +A+ LF +M   G +P      +VL++C        
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257

Query: 533 ---------------------------SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
                                      + S L+ D +KVF+ M ++  I      Y+ M+
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVI-----SYNAMI 312

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD--- 622
           +      KL  AL     + ++   P      +     + L   E +SKQI  L      
Sbjct: 313 EGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALE-LSKQIHGLIIKXGV 371

Query: 623 --DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
             D      L ++Y++     DA    + M  K+I          V+N ++  ++Q+  +
Sbjct: 372 SLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV---------VWNAMFFGYTQHLEN 422

Query: 681 SEMPKVYEKLK 691
            E  K+Y  L+
Sbjct: 423 EEALKLYSTLQ 433


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/618 (34%), Positives = 336/618 (54%), Gaps = 12/618 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL      E  ELGR  H  + K     + F+  +L++ Y+  G +     V  ++   D
Sbjct: 52  VLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKD 111

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++A YA+N  F +A  FF ++     +PN++T++ +L  C  L   D GK +H 
Sbjct: 112 MVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHC 171

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  Y     V   LL +Y +CG  +DA   F  + + +VI W+ +I+ F Q G  EK
Sbjct: 172 SVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK 231

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L + C MR   + PN++TF+  L + A + +  +    H   +K G++   FV  A++ 
Sbjct: 232 ALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMA 291

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y+  G I E   +L E     + VSWN  I  + +    E A+  FS M+R      E 
Sbjct: 292 CYAKCGCI-EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEV 350

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYSSIL+AC+ L +L    Q+H    K+ +  +V VG++LI+ Y KCGS +DA  +F  L
Sbjct: 351 TYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML 410

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN++I  YS +G   +AI +F  M     +P   TF+ VLSACS++G + +G+
Sbjct: 411 DLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGK 470

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM ++YGI P   HY+CMV L+GR+G L+ A+ FI ++P +P+  IWR L  AC  
Sbjct: 471 QYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVI 530

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H+D+++    ++++LEL+P D A +V LSN+YA A    +    RK MK K + KEPG S
Sbjct: 531 HNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLS 590

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WIE    ++ F   + SH+++  +   L+ L  +    G++           D+EKE  +
Sbjct: 591 WIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLL 650

Query: 712 LYHSERLAVGFGLISLPA 729
             HSERLA+ FGL+ +PA
Sbjct: 651 WLHSERLALAFGLVRMPA 668



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 221/432 (51%), Gaps = 5/432 (1%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  +MP  +  S   L+ GYA++  F +AF  F +L G   + N + ++T+L +  S+  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            + G+ +H   +K+ Y S T +  AL+  Y   G +  A  VF+ +  ++++SWT +I  
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + ++  + + L     MR  G  PN +TF   L +C  L+N   G   H  V+K      
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            +VG  ++++Y+  G+  +A +   +M K+   + W+  I+ F ++ ++E+A+E F QM 
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKN-DVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     ++FT+SS+L+A + + SL   + IH   +K+   ++V V ++L+  Y KCG  E
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            +  +F  L+  + VSWN++I +Y Q G   +A+ LF  M+   ++ T  T+ ++L AC+
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 534 HSGLVQDGQKVFESMVKE-YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
               ++ G +V     K  YG   + A  + ++D+  + G ++ A      L ++     
Sbjct: 361 TLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS- 417

Query: 593 WRPLFAACRCHS 604
           W  +      H 
Sbjct: 418 WNAIICGYSMHG 429


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/628 (35%), Positives = 357/628 (56%), Gaps = 21/628 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V  V++  + +  + +G + HAL+ K     ++ V  SL++M +K G ++    V 
Sbjct: 202 DYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVF 261

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D  S N ++AG+  N    +AF  F  +     +P H T+++++  C SL  + 
Sbjct: 262 DNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIING 293
             + LH +T+K    +   V  AL+    KC  ++DA S+F  +  VQ +V+SWTA+I+G
Sbjct: 322 LVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQ-SVVSWTAMISG 380

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q+GD ++ + L  LMR +G+ PN +T++  L    ++  S +    HA+VIK      
Sbjct: 381 YLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEI----HAEVIKTNYEKS 436

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             VGTA++D +  +G I +A K   E+ ++   ++W+A +AG+ +  +TEEA + F Q+ 
Sbjct: 437 SSVGTALLDAFVKIGNISDAVKVF-ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLT 495

Query: 414 RNDAACDEFTYSSILKACSL-LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           R     +EFT+ SI+ AC+    S+   +Q H+  +K +  + + V SSL+  Y K G+ 
Sbjct: 496 REGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNI 555

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E A  +F +    D+VSWNSMI  Y+Q+G+A+KA+ +FE+M    +     TF+ V+SAC
Sbjct: 556 ESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISAC 615

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           +H+GLV  GQ  F  M+ ++ I P   HYSCM+DL  RAG L  A+  I+ +P  P A +
Sbjct: 616 AHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATV 675

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           WR + AA R H ++++ +  +++I+ L+P  +A YV LSN+YA AG   +    RKLM  
Sbjct: 676 WRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDK 735

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
           + + KEPG SWIEV NK Y F + + SH     +Y KL +L  ++ D+G+          
Sbjct: 736 RRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHD 795

Query: 704 --DNEKEDRVLYHSERLAVGFGLI-SLP 728
             D +KE  + +HSERLA+ FGLI +LP
Sbjct: 796 IEDEQKETILSHHSERLAIAFGLIATLP 823



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 261/532 (49%), Gaps = 12/532 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+      +G + H    K  +     V  SLV+MY K G+++    V  +M   D
Sbjct: 108 VLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRD 167

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N LL GY+ N   DQ +  F  +     +P++YT ST++A   +  A+  G Q+HA
Sbjct: 168 VVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL + ++  V N+L++M  K GM+ DA  VF+ +  ++ +SW ++I G   +G   +
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                  M+  G  P   TF   + SCASL+   +  + H + +K G++    V TA++ 
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMV 347

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
             +   EI +A      M    S VSW A I+G+ +N  T++A+  FS M R     + F
Sbjct: 348 ALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHF 407

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYS+IL     +       +IH+ ++K+ +E +  VG++L++A+ K G+  DA +VF  +
Sbjct: 408 TYSTILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI 463

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV++W++M+  Y+Q G   +A  +F ++  EGI+P   TF ++++AC+      +  
Sbjct: 464 ETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQG 523

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F +   +  +       S +V L  + G +E A         +     W  + +    
Sbjct: 524 KQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS-WNSMISGYAQ 582

Query: 603 HSDLKMA----EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           H   K A    E + K+ LE+   DA  ++ + +  A AGL    +    +M
Sbjct: 583 HGQAKKALEVFEEMQKRNLEV---DAITFIGVISACAHAGLVGKGQNYFNIM 631



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 263/561 (46%), Gaps = 52/561 (9%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           Q P  D+   N LL  Y++     +A   F+ L    + P+ YT S +L++C        
Sbjct: 61  QTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTV 120

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+Q+H Q +K   +   +V N+L+ MY K G + D   VF+ +  R+V+SW +++ G+  
Sbjct: 121 GEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSW 180

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +   ++   L CLM+ +G  P+ YT +  +A+ A+     +G   HA V+K G      V
Sbjct: 181 NRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLV 240

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             +++ M S  G + +A+     M ++  SVSWN+ IAG   N +  EA E F+ M    
Sbjct: 241 CNSLISMLSKSGMLRDARVVFDNM-ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG 299

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           A     T++S++K+C+ L  L     +H + +KS   +N +V ++L+ A  KC   +DA 
Sbjct: 300 AKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAF 359

Query: 477 RVFSQLTAAD-VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF---------- 525
            +FS +     VVSW +MI  Y QNG   +A+ LF  M  EG++P + T+          
Sbjct: 360 SLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAV 419

Query: 526 ---------------------LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
                                 A+L A    G + D  KVFE +++   ++     +S M
Sbjct: 420 FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFE-LIETKDVIA----WSAM 474

Query: 565 VDLLGRAGKLEIALIFISNLP---IKPTAPIWRPLFAACRC-HSDLKMAEFISKQILELD 620
           +    +AG+ E A      L    IKP    +  +  AC    + ++  +      ++L 
Sbjct: 475 LAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLR 534

Query: 621 PDDA-AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
            ++A  V  +L  +YA+ G    A E  K  K +++      SW    N +   ++Q+  
Sbjct: 535 LNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDL-----VSW----NSMISGYAQHGQ 585

Query: 680 HSEMPKVYEKLKQLMQQIEDI 700
             +  +V+E++++   +++ I
Sbjct: 586 AKKALEVFEEMQKRNLEVDAI 606



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 135/262 (51%), Gaps = 1/262 (0%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A+ +F+    R++     ++  + +    ++ L L   +   G+ P+ YT +  L+ CA 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
             N  +G   H Q +K G+     VG ++VDMY+  G + + ++   EMG     VSWN+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDR-DVVSWNS 173

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            + G+  N+  ++  E F  M       D +T S+++ A +   ++A   QIH+ +VK  
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           FE+   V +SLI   +K G   DA  VF  +   D VSWNSMI  +  NG+  +A   F 
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293

Query: 512 KMVVEGIRPTNSTFLAVLSACS 533
            M + G +PT++TF +V+ +C+
Sbjct: 294 NMQLAGAKPTHATFASVIKSCA 315


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/634 (35%), Positives = 355/634 (55%), Gaps = 17/634 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQM 178
           I +LS  +    LELG++ H  + +     DQFV+   S +NMY K G +     +  QM
Sbjct: 301 IVILSVVASLNHLELGKQIHGAVVRFG--WDQFVSVANSAINMYVKAGSVNYARRMFGQM 358

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS-AIDEG 237
             +D+ S N +++G A++ L + +   F+ L    + P+ +T +++L  C SL  +   G
Sbjct: 359 KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG 418

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+H   +K   +  + VS AL+ +Y K G ME+AE +F      ++ SW A+++GF   
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            +Y + LRL  LM E G   ++ TF  A  +   L     G   HA VIK       FV 
Sbjct: 479 DNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVI 538

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           + I+DMY   GE+  A+K   ++  S   V+W   I+G   N + E+A+  + QM     
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQI-PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGV 597

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             DE+T+++++KACSLL +L   +QIH+ I+K     +  V +SL++ Y KCG+ EDA  
Sbjct: 598 QPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYG 657

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F ++    V  WN+MI   +Q+G A +A+  F +M   G+ P   TF+ VLSACSHSGL
Sbjct: 658 LFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGL 717

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
             D  K F+SM K YG+ PE  HYSC+VD L RAG ++ A   +S++P + +A ++R L 
Sbjct: 718 TSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLL 777

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR   D +  E +++++  +DP D+A YV LSN+YA A    +A   R +MK   + K
Sbjct: 778 NACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKK 837

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------TDNEKED 709
           EPG SWI++ NK++ F + ++SH E   +Y K++ +M++I++ G+         D E+ED
Sbjct: 838 EPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEEED 897

Query: 710 R---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +   + YHSE+LA+ +GL+  P        + L 
Sbjct: 898 KESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLR 931



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 240/480 (50%), Gaps = 6/480 (1%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+   N  L+ Y +     +A   F  +    V  +  TY  +L++  SL+ ++ GKQ+H
Sbjct: 261 DVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIH 320

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++  +    +V+N+ + MY+K G +  A  +F  + + ++ISW  +I+G  + G  E
Sbjct: 321 GAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEE 380

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMALGDFVGTAI 360
             LRL   +   G+ P+++T T  L +C+SL  S+ +G   H   +K G+ L  FV TA+
Sbjct: 381 CSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTAL 440

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+YS  G++ EA + L          SWNA + GF  +    EA+  FS M       D
Sbjct: 441 IDVYSKGGKMEEA-ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKAD 499

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + T+++  KA   L  L   +QIH+ ++K +F  ++ V S +++ Y KCG  + A +VF+
Sbjct: 500 QITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFN 559

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q+ + D V+W ++I    +NG   +A+  + +M + G++P   TF  ++ ACS    ++ 
Sbjct: 560 QIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQ 619

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++  +++K      +    + +VD+  + G +E A      +  +  A +W  +    
Sbjct: 620 GKQIHANIMK-LNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVA-LWNAMIVGL 677

Query: 601 RCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
             H + + A  F ++        D   ++ + +  + +GL +DA +    M+ K    EP
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQ-KTYGVEP 736



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 225/488 (46%), Gaps = 50/488 (10%)

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           S  SLL + F   +L +   +  L LG+R HA+I  + +  D++VT +L+ MYAKCG + 
Sbjct: 8   SPSSLLPQWF--SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLF 65

Query: 170 SMVAVVKQMPY--LDIASCNCLLAGYAKNA-LFD-----QAFSFFLKLDGIDVQPNHYTY 221
           S   +    P    D+ + N +LA YA    L D     +AF  F  L    +    +T 
Sbjct: 66  SARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTL 125

Query: 222 STMLAIC---GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           S +  +C   GS SA  E  Q +A  + LQ+     V+ AL+ +Y K   + +A  +F+ 
Sbjct: 126 SPLFKLCLLYGSPSA-SEALQGYAVKIGLQW--DVFVAGALVNIYAKFQRIREARVLFDR 182

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  R+V+ W  ++  + + G  ++ L L       G+ P+          C S+R   MG
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD----------CVSVRTILMG 232

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
                            VG   V     L ++     +L      +    WN  ++ + +
Sbjct: 233 -----------------VGKKTV-FERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
             +  EA++ F  M+++   CD  TY  IL   + L  L   +QIH  +V+  ++  V V
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSV 334

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +S I  Y K GS   A R+F Q+   D++SWN++I   +++G    ++ LF  ++  G+
Sbjct: 335 ANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGL 394

Query: 519 RPTNSTFLAVLSACS---HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
            P   T  +VL ACS    S  V  G++V    +K  GI+ +    + ++D+  + GK+E
Sbjct: 395 LPDQFTITSVLRACSSLEESYCV--GRQVHTCALKA-GIVLDSFVSTALIDVYSKGGKME 451

Query: 576 IALIFISN 583
            A +   N
Sbjct: 452 EAELLFHN 459


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/603 (34%), Positives = 332/603 (55%), Gaps = 37/603 (6%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + F   +L++  A+ G     +A+   +P  D  S N ++A  A++     A  F   + 
Sbjct: 80  NTFSYNALLSACARLGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMH 139

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             D   N Y++++ L+ C S  A   G+Q+HA   K  + S   +  AL+ MY KC   E
Sbjct: 140 ADDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPE 199

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A+ VF+ + +RN++SW ++I  ++Q+G  ++ L L   M +DG  P+E T    +++CA
Sbjct: 200 EAQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACA 259

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMG-------- 381
            L     G   H +++K      D V   A+VDMY+  G  WEAK     M         
Sbjct: 260 GLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSET 319

Query: 382 -------KSASS---------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
                  KSA+                V+WN  IA +  N + EEA+  F ++ R     
Sbjct: 320 SMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWP 379

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWE 473
             +TY ++L AC+ L +L   +Q H  ++K  F      ES+V VG+SL++ Y K GS  
Sbjct: 380 THYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSIS 439

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           D  +VF ++ A D VSWN+MI  Y+QNGRA+ A++LFE+M+    RP + T + VLSAC 
Sbjct: 440 DGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACG 499

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGLV++G++ F+SM +++GI+P   HY+CM+DLLGRAG L+     I N+P++P A +W
Sbjct: 500 HSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLW 559

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  ACR H ++ M E+ + ++ ELDPD++  YV LSNMYAE G  AD    R+ MK +
Sbjct: 560 ASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHR 619

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY 713
            +SK+PGCSWIE+  K+  F +++  H    ++++ L+ +  Q+  +       +D + +
Sbjct: 620 GVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQMSRMSIDAEIADDLMNF 679

Query: 714 HSE 716
            SE
Sbjct: 680 SSE 682



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 175/346 (50%), Gaps = 39/346 (11%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ E+    G + HAL+TK++   D ++  +LV+MYAKC   +    V   MP  +I
Sbjct: 154 LSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNI 213

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N L+  Y +N   D+A + F+++      P+  T +++++ C  L+A  EG+Q+H +
Sbjct: 214 VSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTR 273

Query: 244 TMKL-QYLSKTAVSNALLTMYIKCGM-------------------------------MED 271
            +K  ++     ++NAL+ MY KCG                                + D
Sbjct: 274 MVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGD 333

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A++VF  +V++NV++W  +I  +  + + E+ LRL   ++ + + P  YT+   L +CA+
Sbjct: 334 AQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACAN 393

Query: 332 LRNSHMGYMFHAQVIKRGMALGD------FVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L N  +G   H  V+K G           FVG ++VDMY   G I +  K  + M  +  
Sbjct: 394 LANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMA-ARD 452

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +VSWNA I G+ +N + ++A+  F +M+ ++   D  T   +L AC
Sbjct: 453 NVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 64/366 (17%)

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI----------------------- 285
           +  +T + N LL+ Y + G + DA  VF+G+  RN                         
Sbjct: 46  FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105

Query: 286 --------SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
                   S+ A++    QHG     LR +  M  D    N Y+F  AL++CAS + S  
Sbjct: 106 AIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRT 165

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA V K       ++GTA+VDMY+      EA+K    M +  + VSWN+ I  + 
Sbjct: 166 GEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPER-NIVSWNSLITCYE 224

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNV 456
           +N   +EA+  F +M+++    DE T +S++ AC+ L +     Q+H+R+VKS +F  ++
Sbjct: 225 QNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDM 284

Query: 457 HVGSSLIEAYNKCG-SWE------------------------------DAERVFSQLTAA 485
            + ++L++ Y KCG +WE                              DA+ VF Q+   
Sbjct: 285 VLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEK 344

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +VV+WN +I  Y+ N    +A+ LF ++  E + PT+ T+  VL+AC++   +Q GQ+  
Sbjct: 345 NVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAH 404

Query: 546 ESMVKE 551
             ++KE
Sbjct: 405 VHVLKE 410



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S F     + ++L+ AY + GS  DA RVF  +   +  S+N+++ A ++ GRA  A+ L
Sbjct: 44  SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALAL 103

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           F  +      P   ++ AV++A +  G   D  +   +M
Sbjct: 104 FGAIP----DPDQCSYNAVVAALAQHGRGGDALRFLAAM 138


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/617 (34%), Positives = 352/617 (57%), Gaps = 18/617 (2%)

Query: 127 CSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIA 184
           CS  E + +G      + KT  +  D  V   L++M+ K  GD+ S   V ++MP  +  
Sbjct: 178 CSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           +   ++    +     +A   FL++     +P+ +T S +++ C ++  +  G+QLH+Q 
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297

Query: 245 MKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY- 300
           ++        V   L+ MY KC   G M  A  +F+ ++  NV SWTA+I G+ Q G Y 
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+ L L   M    + PN +TF+  L +CA+L    +G       +K G +  + V  ++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G I +A+K    + +  + +S+N  I  + +N  +EEA+E F+++        
Sbjct: 418 ISMYARSGRIDDARKAFDILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            FT++S+L   + + ++   EQIH+R++KS  + N  V ++LI  Y++CG+ E A +VF 
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   +V+SW S+I  ++++G A +A+ LF KM+ EG+RP   T++AVLSACSH GLV +
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNE 596

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G K F+SM  E+G++P   HY+CMVD+LGR+G L  A+ FI+++P K  A +WR    AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H +L++ +  +K I+E +P D A Y+ LSN+YA      +    RK MK K + KE G
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAG 716

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKED 709
           CSW+EV NK+++F+  + SH +  ++Y++L+ L  +I+ +G+  N           +KE 
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776

Query: 710 RVLYHSERLAVGFGLIS 726
            +  HSE++AV FGLIS
Sbjct: 777 LLFQHSEKIAVAFGLIS 793



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 257/535 (48%), Gaps = 11/535 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLD 182
           L  C R    ++G   H  +T++ +  D     SL+++Y+KCG  +   ++ + M    D
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRD 132

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + +++ +A N +  +A   F+ +      PN Y ++     C +   +  G  +  
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 243 QTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
             +K  YL S   V   L+ M++K  G +  A  VFE + +RN ++WT +I    Q G  
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + + L   M   G +P+ +T +  +++CA++    +G   H+Q I+ G+ L   VG  +
Sbjct: 253 GEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312

Query: 361 VDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAFSQMVRND 416
           ++MY+     G +  A+K   ++    +  SW A I G+  +    EEA++ F  M+   
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQI-LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              + FT+SS LKAC+ L +L   EQ+ +  VK  F S   V +SLI  Y + G  +DA 
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           + F  L   +++S+N++I AY++N  + +A+ LF ++  +G+  +  TF ++LS  +  G
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            +  G+++   ++K  G+   ++  + ++ +  R G +E A     ++  +     W  +
Sbjct: 492 TIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTSI 549

Query: 597 FAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
                 H     A E   K + E    +   Y+ + +  +  GL  +  +  K M
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSM 604



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 172/314 (54%), Gaps = 5/314 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK---QMP 179
           V+S C+  E L LG++ H+   +  +  D+ V   L+NMYAKC    SM A  K   Q+ 
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336

Query: 180 YLDIASCNCLLAGYAKNALFD-QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             ++ S   ++ GY +   +D +A   F  +    V PNH+T+S+ L  C +L+A+  G+
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+    +KL + S   V+N+L++MY + G ++DA   F+ L ++N+IS+  +I+ + ++ 
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           + E+ L L   + + G+  + +TF   L+  AS+     G   HA+VIK G+ L   V  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MYS  G I  A +  ++M +  + +SW + I GF ++    +A+E F +M+     
Sbjct: 517 ALISMYSRCGNIESAFQVFEDM-EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575

Query: 419 CDEFTYSSILKACS 432
            +  TY ++L ACS
Sbjct: 576 PNLVTYIAVLSACS 589



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 9/370 (2%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            P+  TYS  L  C    + D G  +H +  +      +   N+L+++Y KCG  E A S
Sbjct: 63  HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATS 122

Query: 275 VFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +F+ +   R++ISW+A+++ F  +    + L     M E+G  PNEY F  A  +C++  
Sbjct: 123 IFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAE 182

Query: 334 NSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKSASSVSWNA 391
              +G      V+K G    D  VG  ++DM+  G G++  A K  ++M +  ++V+W  
Sbjct: 183 FVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER-NAVTWTL 241

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I    +     EAI+ F +M+ +    D FT S ++ AC+ +  L   +Q+HS+ ++  
Sbjct: 242 MITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301

Query: 452 FESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQ-NGRARKAI 507
              +  VG  LI  Y KC   GS   A ++F Q+   +V SW +MI  Y Q  G   +A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF  M++  + P + TF + L AC++   ++ G++VF   VK  G        + ++ +
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK-LGFSSVNCVANSLISM 420

Query: 568 LGRAGKLEIA 577
             R+G+++ A
Sbjct: 421 YARSGRIDDA 430



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 138/277 (49%), Gaps = 3/277 (1%)

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G   K +  +  M   G  P+  T+++ L  C   R+  +G + H ++ +  + L   
Sbjct: 43  NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              +++ +YS  G+  +A    + MG S   +SW+A ++ F  N     A+  F  M+ N
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKC-GSWE 473
               +E+ +++  +ACS    ++  + I   +VK+ + +S+V VG  LI+ + K  G   
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLV 222

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A +VF ++   + V+W  MI    Q G A +AI LF +M++ G  P   T   V+SAC+
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACA 282

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +  L+  GQ++    ++ +G+  +     C++++  +
Sbjct: 283 NMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAK 318


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/616 (34%), Positives = 336/616 (54%), Gaps = 46/616 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F   S++  Y+K G +K  + +  +MP  D  S N +++  +++    +  + FL++   
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
             +PN  TY+++L+ C S+  ++ G  LHA+ ++++          L+ MY KCG +E A
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 300

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+GL + N +SWT++I G  Q G  E+ L L   MRE  +  +++T    L  C S 
Sbjct: 301 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG----------- 381
           ++  +G   HA  I RG+     V  A+V MY+  G++W+A    + M            
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMI 420

Query: 382 -------------------KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                                 + +SWN+ +A + +    EE ++ + QM+R     D  
Sbjct: 421 TAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWI 480

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+S+ + AC+ L  L    QI ++  K  F SNV V +S++  Y++CG  E+A+++FS +
Sbjct: 481 TFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 540

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              ++VSWN+M+  Y+QNG+ RK I +FEKM+  G  P   ++++VLS CSHSG V +GQ
Sbjct: 541 VMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQ 600

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F SM K++GI P   H+ CMVDLLGRAG+LE A   I+ +P KP A IW  L AACR 
Sbjct: 601 YYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRI 660

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H + K+AE   K +LELD +    Y  L+N+Y+E+G        RKLM+ K + K PGCS
Sbjct: 661 HGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCS 720

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ---------QIEDIGHTDNEKEDRVLY 713
           WIEV N+++ F   + +H ++  V+  L+++++          + + G + N       Y
Sbjct: 721 WIEVDNRVHVFTVDDTNHPQIKDVHRMLEEIIKKIEEIKNYANVMNSGRSHN-------Y 773

Query: 714 HSERLAVGFGLISLPA 729
           HSE+LAV   LISLPA
Sbjct: 774 HSEKLAVPLRLISLPA 789



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 216/474 (45%), Gaps = 53/474 (11%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E +  C+    + + R+ HA +    +    F+   L+NMY+ CG I     V   + + 
Sbjct: 9   ESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP 68

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA-------------IC 228
           ++ S N +++G+A +    +A   F K+     + +  ++++M++               
Sbjct: 69  NVYSWNTMISGFADSGQMREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATIKAS 124

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV------------- 275
           GSL  +    QLH    K  +   T V  ++L MYIKCG M+ A+ V             
Sbjct: 125 GSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWN 184

Query: 276 ------------------FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
                             F  + +R+ +SW  +I+   QHG   + L     M   G  P
Sbjct: 185 SMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRP 244

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           N  T+   L++C S+ +   G   HA++++    L  + G  ++DMY+  G + E+ +Q+
Sbjct: 245 NSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRL-ESARQV 303

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +     ++VSW + I G  +    EEA+  F+QM     A D+FT +++L  C     +
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           +  EQ+H+  +    +S+V V ++L+  Y KCG    A   F  +   D++SW +MI A+
Sbjct: 364 SIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAF 423

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           SQ G   KA   F+KM    +   NS    +L+     G  ++G KV+  M++E
Sbjct: 424 SQAGDVEKAREYFDKMPERNVISWNS----MLATYMQRGYWEEGLKVYIQMLRE 473



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 32/341 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LE G   HA I +   C D +    L++MYAKCG ++S   V   +   +
Sbjct: 252 VLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN 311

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S   L+ G A+    ++A   F ++  + V  + +T +T+L +C S   I  G+QLHA
Sbjct: 312 AVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHA 371

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+     S   V+NAL+TMY KCG +  A   FE +  R++ISWTA+I  F Q GD EK
Sbjct: 372 HTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEK 431

Query: 303 P-------------------------------LRLVCLMREDGIDPNEYTFTVALASCAS 331
                                           L++   M  +G+  +  TF+ ++++CA 
Sbjct: 432 AREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACAD 491

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G    AQ  K G +    V  ++V MYS  G+I EA+K    +    + VSWNA
Sbjct: 492 LAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI-VMKNLVSWNA 550

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
            +AG+ +N +  + IE F +M+      D+ +Y S+L  CS
Sbjct: 551 MMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCS 591



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 184/425 (43%), Gaps = 54/425 (12%)

Query: 33  HRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP 92
           H + V ++     Y+ C L +   K   L ++  +F+G    E   +S         S  
Sbjct: 269 HARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL--TEHNAVSWT-------SLI 319

Query: 93  DGFIDDGCSNTVPVTCYSLESL--LDKQFVI-EVLSYCSREECLELGRRYHALITKTAVC 149
            G    G      V    +  +     QF +  VL  C  ++ + +G + HA      + 
Sbjct: 320 GGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLD 379

Query: 150 GDQFVTASLVNMYAKCGDI------------------KSMVAVVKQ-------------M 178
               V  +LV MYAKCGD+                   +M+    Q             M
Sbjct: 380 SSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKM 439

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  ++ S N +LA Y +   +++    ++++    V+ +  T+ST ++ C  L+ +  G 
Sbjct: 440 PERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGN 499

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+ AQ  KL + S  +V+N+++TMY +CG +E+A+ +F  +V +N++SW A++ G+ Q+G
Sbjct: 500 QILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNG 559

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMAL 352
              K + +   M   G  P++ ++   L+ C     SH G      Y F +     G++ 
Sbjct: 560 QGRKVIEIFEKMLNIGNVPDQISYVSVLSGC-----SHSGFVSEGQYYFLSMTKDHGISP 614

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
                  +VD+    G++ +AK  + +M    ++  W A +A    +  T+ A  A   +
Sbjct: 615 MSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNL 674

Query: 413 VRNDA 417
           +  DA
Sbjct: 675 LELDA 679



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/413 (22%), Positives = 166/413 (40%), Gaps = 85/413 (20%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           F  ++  CASLR+  +    HAQ+I  G+    F+   +++MYS  G I +A +    + 
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGI- 65

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS---------SILKACS 432
              +  SWN  I+GF  + +  EA + F +M   D+       S         + +KA  
Sbjct: 66  MFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASG 125

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L  L    Q+H    K  F  +  V +S+++ Y KCG+ + A++VF +     +  WNS
Sbjct: 126 SLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNS 185

Query: 493 MIKAYSQNGRARKAIILFEK-------------------------------MVVEGIRPT 521
           MI  YS+ G  +KA+ LF K                               M  +G RP 
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPN 245

Query: 522 NSTFLAVLSACS-----------HS------------------------GLVQDGQKVFE 546
           + T+ +VLSAC+           H+                        G ++  ++VF+
Sbjct: 246 SMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFD 305

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL---PIKPTAPIWRPLFAACRCH 603
            + +   +      ++ ++  + +AG  E AL+  + +   P+         +   C   
Sbjct: 306 GLTEHNAV-----SWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360

Query: 604 SDLKMAEFISKQILELDPDDAA-VYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            D+ + E +    +    D +  V   L  MYA+ G    A    +LM +++I
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDI 413


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 201/579 (34%), Positives = 339/579 (58%), Gaps = 12/579 (2%)

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           V++ +Q+   D  + N ++ G+       +A   F ++    VQP+ +T+  +L +C  L
Sbjct: 78  VSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRL 137

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            A+ EG+Q+HA  MK  + S   V N L+ MY  CG +E A  VF+ + +RNV +W ++ 
Sbjct: 138 QALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMF 197

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+ + G++E+ ++L   M E  I  +E T    L +C  L +  +G   +  V ++G+ 
Sbjct: 198 AGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLK 257

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               + T++VDMY+  G++  A++   +M +    V+W+A I+G+ +  +  EA++ F +
Sbjct: 258 GNPTLITSLVDMYAKCGQVDTARRLFDQMDRR-DVVAWSAMISGYSQASRCREALDLFHE 316

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M + +   +E T  SIL +C++L +L T + +H  I K + +  V +G++L++ Y KCGS
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            E +  VF ++   +V+SW  +I+  + NG+ +KA+  F  M+ + + P + TF+ VLSA
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH+GLV +G+ +F SM +++GI P   HY CMVD+LGRAG +E A  FI N+PI+P A 
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IWR L A+C+ H ++++ E   KQ++ L+P  +  Y+ LSN+YA  G   DA + R  MK
Sbjct: 497 IWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMK 556

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------ 705
            K I K PGCS IE+   I+ FF+++  HS+  ++Y  ++ +M+QI+  G+  N      
Sbjct: 557 EKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARL 616

Query: 706 -----EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                +KE  V +HSE+LA+ FGLI  P       ++ L
Sbjct: 617 DAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNL 655



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL--TMYIKCGMMEDAESVFEGL 279
           + +L  C ++  ++E   +HA  +K + L K  V+  LL     +    M+ A S+F  +
Sbjct: 28  TLILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQI 84

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            + +  ++  +I GF       + + L   M E+ + P+E+TF   L  C+ L+    G 
Sbjct: 85  DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA ++K G     FV   ++ MY+  GE+  A++   EM +  +  +WN+  AG+ ++
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER-NVRTWNSMFAGYTKS 203

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              EE ++ F +M+  D   DE T  S+L AC  L  L   E I+  + +   + N  + 
Sbjct: 204 GNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI 263

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +SL++ Y KCG  + A R+F Q+   DVV+W++MI  YSQ  R R+A+ LF +M    I 
Sbjct: 264 TSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANID 323

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T +++LS+C+  G ++ G+ V    +K+  +       + ++D   + G +E ++ 
Sbjct: 324 PNEITMVSILSSCAVLGALETGKWV-HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIE 382

Query: 580 FISNLPIK 587
               +P+K
Sbjct: 383 VFGKMPVK 390



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 11/309 (3%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L+   D+  ++ VL+ C R   LELG   +  + +  + G+  +  SLV+MYAKCG + +
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              +  QM   D+ + + +++GY++ +   +A   F ++   ++ PN  T  ++L+ C  
Sbjct: 279 ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAV 338

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L A++ GK +H    K +      +  AL+  Y KCG +E +  VF  +  +NV+SWT +
Sbjct: 339 LGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVL 398

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G   +G  +K L    LM E  ++PN+ TF   L++C     SH G +   + +   M
Sbjct: 399 IQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC-----SHAGLVDEGRDLFVSM 453

Query: 351 ALGDFVGTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +    +   I      VD+    G I EA + +K M    ++V W   +A    ++  E 
Sbjct: 454 SRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEI 513

Query: 405 AIEAFSQMV 413
             E+  Q++
Sbjct: 514 GEESLKQLI 522


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 332/576 (57%), Gaps = 1/576 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+   CL   R+ HA   K     D+ V  ++V++YAK G++         +P+ ++ +C
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G  +  L  +A   F  +    V  +  + S + + C  +    +G Q+H   +K
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V NA+L +Y KC  + +A  VF+ + QR+ +SW AII   +Q+  YE  +  
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAH 441

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
           +  M   G++P+++T+   L +CA L++   G + H + IK G+ L  FV + +VDMY  
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCK 501

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G I EA+K    +G     VSWN+ I+GF   +++EEA   FS+M+      D FTY++
Sbjct: 502 CGAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYAT 560

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG+  D+  +F +    D
Sbjct: 561 VLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLD 620

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI  Y+ +G+  +A+ +FE+M    + P ++TF+AVL ACSH GL+ DG + F 
Sbjct: 621 FVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFH 680

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M   Y ++P+  H++CMVD+LGR+   + AL FI ++PI+  A +W+ L + C+   D+
Sbjct: 681 LMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDV 740

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  +  +L LDPDDA+VY+ LSN+YA +G   D    R+LM+   + KEPGCSWIEV
Sbjct: 741 EVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEV 800

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F   +K H    +VYE L  L+ +++  G+
Sbjct: 801 QSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGY 836



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 238/466 (51%), Gaps = 2/466 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+  +  +L  C   + L LG + HAL  KT +  D    ++LV+MY KC  +   +  
Sbjct: 149 LDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRF 208

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   +  S    +AG  +N  + +    F+++  + +  +   Y++    C ++  +
Sbjct: 209 FHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCL 268

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              +QLHA  +K  + S   V  A++ +Y K G + DA   F GL   NV +  A++ G 
Sbjct: 269 STARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGL 328

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G   + ++L   M   G+  +  + +   ++CA ++    G   H   +K G  +  
Sbjct: 329 VRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDV 388

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  AI+D+Y     + EA    +EM +   SVSWNA IA   +N+  E+ I   ++M+R
Sbjct: 389 CVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAHLNEMLR 447

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D+FTY S+LKAC+ L SL     +H + +KS    +  V S++++ Y KCG+  +
Sbjct: 448 SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITE 507

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A+++  ++   ++VSWNS+I  +S   ++ +A   F +M+  G++P + T+  VL  C++
Sbjct: 508 AQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCAN 567

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+ 
Sbjct: 568 LATIELGKQIHGQIIKQE-MLGDEYISSTLVDMYAKCGNMPDSLLM 612



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 243/532 (45%), Gaps = 41/532 (7%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  Y   GD  +  ++   MP  D+ S N L++GY ++ +F  +    +++    V  
Sbjct: 90  TMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVAL 149

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T + +L  CG L  +  G Q+HA  +K    +     +AL+ MY KC  ++DA   F
Sbjct: 150 DRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFF 209

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A I G  Q+  Y + + L   M+  G+  ++  +  A  SCA++    
Sbjct: 210 HGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLS 269

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-SWNAQIAG 395
                HA  IK   +    VGTAIVD+Y+  G + +A++    +G    +V + NA + G
Sbjct: 270 TARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAF--IGLPHHNVETCNAMMVG 327

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             R     EA++ F  M R+    D  + S +  AC+ +       Q+H   VKS F+ +
Sbjct: 328 LVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVD 387

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V V +++++ Y KC +  +A  VF ++   D VSWN++I A  QN      I    +M+ 
Sbjct: 388 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLR 447

Query: 516 EGIRPTNSTFLAVLSACS-----HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            G+ P + T+ +VL AC+       GLV  G+ +   +  +  +        C    +  
Sbjct: 448 SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITE 507

Query: 571 AGKL-------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
           A KL                         E A  F S   ++ +KP    +  +   C  
Sbjct: 508 AQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCAN 567

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADA----EEQRKL 649
            + +++ + I  QI++ +   D  +  TL +MYA+ G   D+    E+ RKL
Sbjct: 568 LATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKL 619



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 210/458 (45%), Gaps = 43/458 (9%)

Query: 220 TYSTMLAICGSL--SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           T+S +  +C S   SA+  G+  HA+ +   ++  T VSN LL MY +CG    A  VF+
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 278 GLVQRN-------------------------------VISWTAIINGFKQHGDYEKPLRL 306
            +  R+                               V+SW  +I+G+ QHG +   + L
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+  +  T  V L SC  L +  +G   HA  +K G+      G+A+VDMY  
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              + +A +    MG+  +SVSW A IAG  +N++    +E F QM R      +  Y+S
Sbjct: 199 CRSLDDALRFFHGMGER-NSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYAS 257

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
             ++C+ +P L+T  Q+H+  +K+ F S+  VG+++++ Y K G+  DA R F  L   +
Sbjct: 258 AFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHN 317

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V + N+M+    + G   +A+ LF+ M   G+     +   V SAC+       G +V  
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHC 377

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC---RCH 603
             VK  G   +    + ++DL G+   L  A +    +  + +   W  + AA     C+
Sbjct: 378 LAVKS-GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS-WNAIIAALEQNECY 435

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
            D  +A         ++PDD   +   S + A AGLQ+
Sbjct: 436 ED-TIAHLNEMLRSGMEPDD---FTYGSVLKACAGLQS 469



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 185/374 (49%), Gaps = 3/374 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S C+  +    G + H L  K+    D  V  +++++Y KC  +     V ++M   D
Sbjct: 359 VFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRD 418

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++A   +N  ++   +   ++    ++P+ +TY ++L  C  L +++ G  +H 
Sbjct: 419 SVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHG 478

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +K        VS+ ++ MY KCG + +A+ + + +  + ++SW +II+GF      E+
Sbjct: 479 KAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEE 538

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             R    M + G+ P+ +T+   L +CA+L    +G   H Q+IK+ M   +++ + +VD
Sbjct: 539 AQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVD 598

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + ++     E  +    VSWNA I G+  + +  EA+E F +M R +   +  
Sbjct: 599 MYAKCGNMPDSLLMF-EKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHA 657

Query: 423 TYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFS 480
           T+ ++L+ACS +  L   C+  H    + K    +   + +++   +  G  E  E + S
Sbjct: 658 TFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRS 717

Query: 481 QLTAADVVSWNSMI 494
               AD V W +++
Sbjct: 718 MPIEADAVVWKTLL 731



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 15/302 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+  + LE G   H    K+ +  D FV++++V+MY KCG I     +  ++   +
Sbjct: 460 VLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQE 519

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++G++     ++A  FF ++  + V+P+H+TY+T+L  C +L+ I+ GKQ+H 
Sbjct: 520 LVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHG 579

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q +K + L    +S+ L+ MY KCG M D+  +FE   + + +SW A+I G+  HG   +
Sbjct: 580 QIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLE 639

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMA--LGD 354
            L +   M+   + PN  TF   L +C     SH+G +      FH    +  +   L  
Sbjct: 640 ALEMFERMQRANVVPNHATFVAVLRAC-----SHVGLLDDGCQYFHLMTSRYKLVPQLEH 694

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F    +VD+        EA + ++ M   A +V W   ++     Q  E A  A S ++R
Sbjct: 695 F--ACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLR 752

Query: 415 ND 416
            D
Sbjct: 753 LD 754


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/658 (32%), Positives = 354/658 (53%), Gaps = 68/658 (10%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK---- 169
            LD     ++L+ C+R        R HA I K+    + F+   L+++Y KCG +     
Sbjct: 16  FLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARK 75

Query: 170 ---------------------------SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
                                        V + ++MP +D  S N +++G+ ++  FD+A
Sbjct: 76  LFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEA 135

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
             +F ++ G     N Y++ + L+ C  L  +  G Q+H+   +  YLS   + +AL+ M
Sbjct: 136 LVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDM 195

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KCG +E A+SVF+ +  R+ +SW ++I  ++Q+G  ++ L++   M + G++P+E T 
Sbjct: 196 YSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTL 255

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM- 380
              +++CA++     G   HA+V+K      D + G A++DMY+    I EA+     M 
Sbjct: 256 ASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMP 315

Query: 381 ------------GKSASS-----------------VSWNAQIAGFFRNQKTEEAIEAFSQ 411
                       G + +S                 ++WNA IAG  +N + EEA+  F  
Sbjct: 316 IRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRL 375

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEA 465
           + R       +T+ ++L AC+ L  L    Q HS ++K  F      +S+V VG+SLI+ 
Sbjct: 376 LKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDM 435

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCGS E+  RVF  +   D VSWN+MI  Y+QNG   KA+ +F KM+  G  P + T 
Sbjct: 436 YMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTM 495

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + VL ACSH+GL+ +G+  F SM  ++G++P + HY+CMVDLLGRAG LE A   I  + 
Sbjct: 496 IGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMS 555

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           ++P A +W  L AAC+ H ++++ E++ K++LE+DP+++  YV LSNMYAE     +   
Sbjct: 556 MQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVR 615

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            RKLM+ + + K+PGCSWIE+  ++  F  ++K H+   ++Y  L+ ++QQ++  G+ 
Sbjct: 616 VRKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYV 673



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 122/265 (46%), Gaps = 19/265 (7%)

Query: 51  LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTR--NDSFPDGFIDDGCS----NTV 104
           +F+  P R+ +S + ++ +GY    +  ++R  +S     D      +  GC+    N  
Sbjct: 310 IFDMMPIRSVVSETSMV-SGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEE 368

Query: 105 PVTCYSL---ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVC------GDQFV 154
            +  + L   ES+    +    +L+ C+    L+LGR+ H+ + K           D FV
Sbjct: 369 ALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFV 428

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
             SL++MY KCG +++   V + M   D  S N ++ GYA+N   ++A   F K+     
Sbjct: 429 GNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGE 488

Query: 215 QPNHYTYSTMLAICGSLSAIDEGK-QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
            P+H T   +L  C     +DEG+    + T +   +        ++ +  + G +E+A+
Sbjct: 489 APDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAK 548

Query: 274 SVFEGL-VQRNVISWTAIINGFKQH 297
           ++ E + +Q + I W +++   K H
Sbjct: 549 NLIEEMSMQPDAIVWGSLLAACKVH 573


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/636 (32%), Positives = 356/636 (55%), Gaps = 13/636 (2%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   ++ VL+  +  + LELG++ H +  K+ +  D  V  SLVNMY+K G       V 
Sbjct: 903  DAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVF 962

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAI 234
              M +LD+ S N +++  A+++L +++ + F+ L    ++P+H+T +++L  C SL   +
Sbjct: 963  NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGL 1022

Query: 235  DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            +  +Q+H   +K   ++ + V+  L+ +Y K G ME+AE +F+     ++  W A++ G+
Sbjct: 1023 NISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGY 1082

Query: 295  KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
                D +K L L  L+ + G   ++ T   A  +C  L     G   HA  IK G     
Sbjct: 1083 IIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDL 1142

Query: 355  FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
             V + I+DMY   G++  A      +  +   V+W + I+G   N   ++A+  + +M +
Sbjct: 1143 HVNSGILDMYIKCGDMVNAGIVFNYI-SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201

Query: 415  NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
            +    DE+T+++++KA S + +L    Q+H+ ++K    S+  VG+SL++ Y KCG+ ED
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261

Query: 475  AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
            A R+F ++   ++  WN+M+   +Q+G A +A+ LF+ M   GI P   +F+ +LSACSH
Sbjct: 1262 AYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSH 1321

Query: 535  SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            +GL  +  +   SM  +YGI PE  HYSC+VD LGRAG ++ A   I  +P K +A I R
Sbjct: 1322 AGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINR 1381

Query: 595  PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
             L  ACR   D++  + ++ ++  L+P D+A YV LSN+YA A    D  + RK+MK K 
Sbjct: 1382 ALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKN 1441

Query: 655  ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
            + K+PG SWI+V N ++ F   ++SH +   +Y+K++++M+ I + G+            
Sbjct: 1442 VKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVE 1501

Query: 704  DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
            D EKE  + YHSE+LA+ +GLIS PA       + L
Sbjct: 1502 DEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNL 1537



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 205/459 (44%), Gaps = 37/459 (8%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            L LG+  HA I  +   GD F++ +L+ MY+KCG + S   V    P  D+ + N +L  
Sbjct: 637  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696

Query: 193  YA-----KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            YA      +    +    F  L          T + +L +C +   +   + +H   +K+
Sbjct: 697  YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 756

Query: 248  QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                   VS AL+ +Y KCG M DA  +F+ + +R+V+ W  ++ G+ Q G  ++  +L 
Sbjct: 757  GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 816

Query: 308  CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
                  G+ P+E++  + L   + +                G  L D V           
Sbjct: 817  SEFHRSGLRPDEFSVQLILNGVSEVN------------WDEGKWLADQV----------- 853

Query: 368  GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
             + + AK  L +   +     WN +++          AIE F  M   +   D  T   +
Sbjct: 854  -QAYAAKLSLSD--DNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910

Query: 428  LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            L A +    L   +Q+H   VKS  +S+V V +SL+  Y+K G    A  VF+ +   D+
Sbjct: 911  LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970

Query: 488  VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
            +SWNSMI + +Q+    +++ LF  ++ EG++P + T  +VL ACS    + DG  +   
Sbjct: 971  ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LIDGLNISRQ 1027

Query: 548  M---VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
            +     + G + +    + ++D+  ++GK+E A     N
Sbjct: 1028 IHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN 1066



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 143/604 (23%), Positives = 251/604 (41%), Gaps = 70/604 (11%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            VL  C    CL      H    K  +  D FV+ +LVN+Y+KCG ++    +   M   D
Sbjct: 733  VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 792

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            +   N +L GY +  L  +AF  F +     ++P+ ++   +L     ++  DEGK L  
Sbjct: 793  VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLAD 851

Query: 243  QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            Q     Y +K ++S             +D   VF          W   ++     GD   
Sbjct: 852  QVQA--YAAKLSLS-------------DDNPDVF---------CWNKKLSECLWAGDNWG 887

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             +     M    ID +  T  V LA+ A   +  +G   H   +K G+     V  ++V+
Sbjct: 888  AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947

Query: 363  MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            MYS +G  + A++   +M K    +SWN+ I+   ++   EE++  F  ++      D F
Sbjct: 948  MYSKMGCAYFAREVFNDM-KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 1006

Query: 423  TYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T +S+L+AC SL+  L    QIH   +K+   ++  V ++LI+ Y+K G  E+AE +F  
Sbjct: 1007 TLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN 1066

Query: 482  LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
                D+  WN+M+  Y      +KA+ LF  +   G +    T      AC    L+  G
Sbjct: 1067 KDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG 1126

Query: 542  QKVFESMVK---------EYGIL---------------------PEEAHYSCMVDLLGRA 571
            +++    +K           GIL                     P++  ++ M+      
Sbjct: 1127 KQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDN 1186

Query: 572  GKLEIALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVY 627
            G  + AL     +    + P    +  L  A  C + L+    +   +++LD   D  V 
Sbjct: 1187 GNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVG 1246

Query: 628  VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
             +L +MYA+ G   DA    K M ++ I+         ++N +    +Q+ +  E   ++
Sbjct: 1247 TSLVDMYAKCGNIEDAYRLFKKMNVRNIA---------LWNAMLVGLAQHGNAEEAVNLF 1297

Query: 688  EKLK 691
            + +K
Sbjct: 1298 KSMK 1301



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 6/213 (2%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +  S  N  +G   HA+++  G A   F+   ++ MYS  G +  A +Q+ +      
Sbjct: 628 LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSA-RQVFDTTPERD 686

Query: 386 SVSWNAQIAGFF-----RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            V+WNA +  +       +   +E +  F  +  +  +    T + +LK C     L   
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           E +H   +K   E +V V  +L+  Y+KCG   DA  +F  +   DVV WN M+K Y Q 
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           G  ++A  LF +    G+RP   +   +L+  S
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVS 839


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/615 (33%), Positives = 344/615 (55%), Gaps = 12/615 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H  + K     D F   +LV+MYAK GD+   ++V +++   DI S N ++AG   
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   +QA     ++    + PN +T S+ L  C  +   + G+QLH+  MK+   S   V
Sbjct: 337 HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFV 396

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           S  L+ MY KC ++EDA   F  L ++++I+W AII+G+ Q+ +  + L L   M ++GI
Sbjct: 397 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             N+ T +  L S A L+  H+    H   +K G     +V  +++D Y     + +A++
Sbjct: 457 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 516

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             +E       VS+ + I  + +  + EEA++ F +M   +   D F  SS+L AC+ L 
Sbjct: 517 IFEEC-TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +    +Q+H  I+K  F  ++  G+SL+  Y KCGS +DA R FS+LT   +VSW++MI 
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             +Q+G  R+A+ LF +M+ EG+ P + T ++VL AC+H+GLV + +  FESM + +G  
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 695

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P + HY+CM+DLLGRAGK+  A+  ++ +P +  A +W  L  A R H D+++    ++ 
Sbjct: 696 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 755

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           +  L+P+ +  +V L+N+YA AG   +  E R+LM+  ++ KEPG SWIEV +K+Y F  
Sbjct: 756 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 815

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            ++SH    ++Y KL +L   ++  G+             +EKE  + +HSE+LAV FGL
Sbjct: 816 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 875

Query: 725 ISLPAKNKFECSRTL 739
           I+ P        + L
Sbjct: 876 IATPQGAPIRVKKNL 890



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 180/626 (28%), Positives = 313/626 (50%), Gaps = 28/626 (4%)

Query: 58  RAGLSTSDLIFNGYMNIEEKGISRN-GYSTR---NDSFPD---------GFIDDGCSNTV 104
           ++GLS    I N  +N+  K   RN GY+ +     S PD         G+  +G     
Sbjct: 84  KSGLSDDPSIRNHLINLYSK--CRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGA 141

Query: 105 PVTCYSLESLLDK--QFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
            +  + +  L  K  +F    VL  CS  + L +G++ H ++  +   GD FV  +LV M
Sbjct: 142 LMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVM 201

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           YAKC +      +  ++P  ++ S N L + Y +     +A   F ++    ++PN ++ 
Sbjct: 202 YAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSL 261

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S+M+  C  L     GK +H   +KL Y      +NAL+ MY K G + DA SVFE + Q
Sbjct: 262 SSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ 321

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            +++SW A+I G   H  +E+ L L+  M+  GI PN +T + AL +CA +    +G   
Sbjct: 322 PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQL 381

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H+ ++K  M    FV   +VDMYS    + +A+     + +    ++WNA I+G+ +  +
Sbjct: 382 HSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK-DLIAWNAIISGYSQYWE 440

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EA+  F +M +     ++ T S+ILK+ + L  +  C Q+H   VKS F S+++V +S
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 500

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI++Y KC   EDAER+F + T  D+VS+ SMI AY+Q G+  +A+ LF +M    ++P 
Sbjct: 501 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 560

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
                ++L+AC++    + G+++   ++K YG + +    + +V++  + G ++ A    
Sbjct: 561 RFVCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAF 619

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGL 639
           S L  +     W  +      H   + A  +  Q+L+  + P+   + V++      AGL
Sbjct: 620 SELTERGIVS-WSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL-VSVLGACNHAGL 677

Query: 640 QADA----EEQRKLMKMKEISKEPGC 661
             +A    E   +L   K + +   C
Sbjct: 678 VTEAKLYFESMEELFGFKPMQEHYAC 703



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 274/564 (48%), Gaps = 51/564 (9%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++LS C   + L  G + HA ITK+ +  D  +   L+N+Y+KC +      +V +    
Sbjct: 61  KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEP 120

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S + L++GYA+N L   A   F ++  + V+ N +T+S++L  C  +  +  GKQ+H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   +     V+N L+ MY KC    D++ +F+ + +RNV+SW A+ + + Q     
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCG 240

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + + L   M   GI PNE++ +  + +C  LR+S  G + H  +IK G     F   A+V
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+ +G++ +A    +++ K    VSWNA IAG   ++  E+A+E   QM R+    + 
Sbjct: 301 DMYAKVGDLADAISVFEKI-KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNI 359

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT SS LKAC+ +       Q+HS ++K   ES++ V   L++ Y+KC   EDA   F+ 
Sbjct: 360 FTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 419

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA---------- 531
           L   D+++WN++I  YSQ     +A+ LF +M  EGI    +T   +L +          
Sbjct: 420 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 479

Query: 532 ----------------------------CSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
                                       CSH   V+D +++FE        + +   ++ 
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH---VEDAERIFEECT-----IGDLVSFTS 531

Query: 564 MVDLLGRAGKLEIAL---IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           M+    + G+ E AL   + + ++ +KP   +   L  AC   S  +  + +   IL+  
Sbjct: 532 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591

Query: 621 -PDDAAVYVTLSNMYAEAGLQADA 643
              D     +L NMYA+ G   DA
Sbjct: 592 FVLDIFAGNSLVNMYAKCGSIDDA 615



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 175/342 (51%), Gaps = 1/342 (0%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +D  +  P   +YS +L+ C +  ++  G Q+HA   K       ++ N L+ +Y KC  
Sbjct: 47  IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRN 106

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
              A  + +   + +++SW+A+I+G+ Q+G     L     M   G+  NE+TF+  L +
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C+ +++  +G   H  V+  G     FV   +V MY+   E  ++K+   E+ +  + VS
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER-NVVS 225

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA  + + +     EA+  F +MV +    +EF+ SS++ AC+ L   +  + IH  ++
Sbjct: 226 WNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  ++ +    ++L++ Y K G   DA  VF ++   D+VSWN++I     +    +A+ 
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           L  +M   GI P   T  + L AC+  GL + G+++  S++K
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK 387



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 153/296 (51%), Gaps = 5/296 (1%)

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           L+ +    P   +++  L+ C + ++   G   HA + K G++    +   ++++YS   
Sbjct: 46  LIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCR 105

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
               A+K + E       VSW+A I+G+ +N     A+ AF +M      C+EFT+SS+L
Sbjct: 106 NFGYARKLVDE-SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           KACS++  L   +Q+H  +V S FE +V V ++L+  Y KC  + D++R+F ++   +VV
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ-KVFES 547
           SWN++   Y Q     +A+ LF +MV+ GI+P   +  ++++AC  +GL    + K+   
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC--TGLRDSSRGKIIHG 282

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            + + G   +    + +VD+  + G L  A+     +  +P    W  + A C  H
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QPDIVSWNAVIAGCVLH 337


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/617 (34%), Positives = 351/617 (56%), Gaps = 18/617 (2%)

Query: 127 CSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIA 184
           CS  E + +G      + KT  +  D  V   L++M+ K  GD+ S   V ++MP  +  
Sbjct: 178 CSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAV 237

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           +   ++    +     +A   FL +     +P+ +T S +++ C ++  +  G+QLH+Q 
Sbjct: 238 TWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQA 297

Query: 245 MKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY- 300
           ++        V   L+ MY KC   G M  A  +F+ ++  NV SWTA+I G+ Q G Y 
Sbjct: 298 IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYD 357

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+ L L   M    + PN +TF+  L +CA+L    +G       +K G +  + V  ++
Sbjct: 358 EEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSL 417

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G I +A+K    + +  + +S+N  I  + +N  +EEA+E F+++        
Sbjct: 418 ISMYARSGRIDDARKAFDILFEK-NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGAS 476

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            FT++S+L   + + ++   EQIH+R++KS  + N  V ++LI  Y++CG+ E A +VF 
Sbjct: 477 AFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFE 536

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   +V+SW S+I  ++++G A +A+ LF KM+ EG+RP   T++AVLSACSH GLV +
Sbjct: 537 DMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNE 596

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G K F+SM  E+G++P   HY+C+VD+LGR+G L  A+ FI+++P K  A +WR    AC
Sbjct: 597 GWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGAC 656

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H +L++ +  +K I+E +P D A Y+ LSN+YA      +    RK MK K + KE G
Sbjct: 657 RVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAG 716

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKED 709
           CSW+EV NK+++F+  + SH +  ++Y++L+ L  +I+ +G+  N           +KE 
Sbjct: 717 CSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776

Query: 710 RVLYHSERLAVGFGLIS 726
            +  HSE++AV FGLIS
Sbjct: 777 LLFQHSEKIAVAFGLIS 793



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 257/535 (48%), Gaps = 11/535 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLD 182
           L  C R    ++G   H  +T++ +  D     SL+++Y+KCG  +   ++ + M    D
Sbjct: 73  LKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRD 132

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + +++ +A N +  +A   F+ +      PN Y ++     C +   +  G  +  
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 243 QTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
             +K  YL S   V   L+ M++K  G +  A  VFE + +RN ++WT +I    Q G  
Sbjct: 193 FVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + + L   M   G +P+ +T +  +++CA++    +G   H+Q I+ G+ L   VG  +
Sbjct: 253 GEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCL 312

Query: 361 VDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAFSQMVRND 416
           ++MY+     G +  A+K   ++    +  SW A I G+  +    EEA++ F  M+   
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQI-LDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTH 371

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              + FT+SS LKAC+ L +L   EQ+ +  VK  F S   V +SLI  Y + G  +DA 
Sbjct: 372 VIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDAR 431

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           + F  L   +++S+N++I AY++N  + +A+ LF ++  +G+  +  TF ++LS  +  G
Sbjct: 432 KAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIG 491

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            +  G+++   ++K  G+   ++  + ++ +  R G +E A     ++  +     W  +
Sbjct: 492 TIGKGEQIHARVIKS-GLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVIS-WTSI 549

Query: 597 FAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
                 H     A E   K + E    +   Y+ + +  +  GL  +  +  K M
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSM 604



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 173/314 (55%), Gaps = 5/314 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK---QMP 179
           V+S C+  E L LG++ H+   +  +  D+ V   L+NMYAKC    SM A  K   Q+ 
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336

Query: 180 YLDIASCNCLLAGYAKNALFD-QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             ++ S   ++ GY +   +D +A   F  +    V PNH+T+S+ L  C +L+A+  G+
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGE 396

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+    +KL + S   V+N+L++MY + G ++DA   F+ L ++N+IS+  +I+ + ++ 
Sbjct: 397 QVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNL 456

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           + E+ L L   + + G+  + +TF   L+  AS+     G   HA+VIK G+ L   V  
Sbjct: 457 NSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN 516

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MYS  G I  A +  ++M +  + +SW + I GF ++    +A+E F +M+     
Sbjct: 517 ALISMYSRCGNIESAFQVFEDM-EDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVR 575

Query: 419 CDEFTYSSILKACS 432
            +E TY ++L ACS
Sbjct: 576 PNEVTYIAVLSACS 589



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 184/370 (49%), Gaps = 9/370 (2%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            P+  TYS  L  C    + D G  +H +  +      +   N+L+++Y KCG  E A S
Sbjct: 63  HPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATS 122

Query: 275 VFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +F  +   R++ISW+A+++ F  +    + L     M E+G  PNEY F  A  +C++  
Sbjct: 123 IFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAE 182

Query: 334 NSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKSASSVSWNA 391
              +G      VIK G    D  VG  ++DM+  G G++  A K  ++M +  ++V+W  
Sbjct: 183 FVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPER-NAVTWTL 241

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I    +     EAI+ F  M+ +    D FT S ++ AC+ +  L   +Q+HS+ ++  
Sbjct: 242 MITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301

Query: 452 FESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQ-NGRARKAI 507
              +  VG  LI  Y KC   GS   A ++F Q+   +V SW +MI  Y Q  G   +A+
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEAL 361

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF  M++  + P + TF + L AC++   ++ G++VF   VK  G        + ++ +
Sbjct: 362 DLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVK-LGFSSVNCVANSLISM 420

Query: 568 LGRAGKLEIA 577
             R+G+++ A
Sbjct: 421 YARSGRIDDA 430



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 136/277 (49%), Gaps = 3/277 (1%)

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G   K +  +  M   G  P+  T+++ L  C   R+  +G + H ++ +  + L   
Sbjct: 43  NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSV 102

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              +++ +YS  G+  +A    + MG S   +SW+A ++ F  N     A+  F  M+ N
Sbjct: 103 TLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIEN 162

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKC-GSWE 473
               +E+ +++  +ACS    ++  + I   ++K+ + +S+V VG  LI+ + K  G   
Sbjct: 163 GYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLV 222

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A +VF ++   + V+W  MI    Q G A +AI LF  M+  G  P   T   V+SAC+
Sbjct: 223 SAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACA 282

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +  L+  GQ++    ++ +G+  +     C++++  +
Sbjct: 283 NMELLLLGQQLHSQAIR-HGLTLDRCVGCCLINMYAK 318


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/652 (32%), Positives = 346/652 (53%), Gaps = 68/652 (10%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG--------------- 166
           ++L  C +       R  H  + +T  C + F+   L+++Y KCG               
Sbjct: 29  KLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSER 88

Query: 167 ---DIKSMVAVVKQ-------------MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
                 S+++ + +             MP  D  S N ++AG+A++  F++A  +F+++ 
Sbjct: 89  NVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMH 148

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             D   N Y++ + L+ C  L  +  G Q+H    K +Y     + + L+  Y KCG++ 
Sbjct: 149 RDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVG 208

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VF+G+ ++NV+SW  +I  ++Q+G   + L     M E G  P+E T    +++CA
Sbjct: 209 CARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACA 268

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM--------- 380
           +L     G   HA+V+K      D + G A+VDMY+  G + EA+     M         
Sbjct: 269 TLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSET 328

Query: 381 ------GKSASS---------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
                  KSAS                VSWNA IAG+ +N + EEA+  F  + R     
Sbjct: 329 TMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCP 388

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWE 473
             +T+ ++L A + L  L    Q HS +VK  F      E ++ VG+SLI+ Y KCGS E
Sbjct: 389 THYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVE 448

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +  RVF  +   D VSWN+MI  Y+QNG   +A+ LF+KM+  G +P + T +  L ACS
Sbjct: 449 EGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACS 508

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV++G++ F SM KE+G+LP + HY+CMVDLLGRAG LE A   I ++P +P A +W
Sbjct: 509 HAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVW 568

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L +AC+ H ++ + ++++++I E+DP  +  YV L+NMY+E G   DA   RKLM+ +
Sbjct: 569 SSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRR 628

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            + K+PGCSWI++ + ++ F  ++K H +  ++Y  LK L + +   G+  +
Sbjct: 629 GVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 205/432 (47%), Gaps = 69/432 (15%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           ++ +L +C  L +  + + +H + ++  +  +  + N L+ +Y KCG ++ A  VF+ + 
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86

Query: 281 QRNVI-------------------------------SWTAIINGFKQHGDYEKPLRLVCL 309
           +RNV                                SW ++I GF QH  +E+ L     
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M  D    N+Y+F   L++C+ L++  +G   H  + K   +L  F+G+ ++D YS  G 
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A++    M +  + VSWN  I  + +N    EA+EAF +M       DE T +S++ 
Sbjct: 207 VGCARRVFDGM-EEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVS 265

Query: 430 ACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA---- 484
           AC+ L +     QIH+R+VKS KF +++ +G++L++ Y KCG   +A  VF ++      
Sbjct: 266 ACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325

Query: 485 ---------------------------ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
                                       D+VSWN++I  Y+QNG   +A+ LF  +  E 
Sbjct: 326 SETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRES 385

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-----EYGILPEEAHYSCMVDLLGRAG 572
           + PT+ TF  +L+A ++   ++ G++    +VK     + G  P+    + ++D+  + G
Sbjct: 386 VCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCG 445

Query: 573 KLEIALIFISNL 584
            +E  L    N+
Sbjct: 446 SVEEGLRVFENM 457



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 31/145 (21%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D   ++ +L  C  L S      +H R++++ F   V + + LI+ Y KCG  + A +VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 480 SQLTAADVV-------------------------------SWNSMIKAYSQNGRARKAII 508
            +++  +V                                SWNSMI  ++Q+ R  +A+ 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACS 533
            F +M  +     + +F + LSACS
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACS 167


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 334/576 (57%), Gaps = 1/576 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+   CL  GR+ HA   K     D+ V  ++V++YAK   +         +P   + + 
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G  +  L  +A   F  +    ++ +  + S + + C       +G+Q+H   +K
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V+NA+L +Y KC  + +A  +F+G+ Q++ +SW AII   +Q+G Y+  +  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+ P+++T+   L +CA+LR+   G M H +VIK G+    FV + +VDMY  
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G I EA+K    +G     VSWNA ++GF  N+++EEA + FS+M+      D FT+++
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG   D+  VF ++   D
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 618

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI  Y+ +G   +A+ +FE+M  E + P ++TF+AVL ACSH GL  DG + F 
Sbjct: 619 FVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFH 678

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M   Y + P+  H++CMVD+LGR+   + A+ FI+++P +  A IW+ L + C+   D+
Sbjct: 679 LMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDV 738

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  +  +L LDPDD++VY+ LSN+YAE+G  AD    R+L+K   + KEPGCSWIEV
Sbjct: 739 EIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEV 798

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F   +K+H    ++YE L  L+ +++  G+
Sbjct: 799 QSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 834



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 237/464 (51%), Gaps = 2/464 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     +L  CS  E L LG + HAL  KT +  D    ++LV+MY KC  +   +   
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +  S    +AG  +N  + +    F+++  + +  +  +Y++    C ++S ++
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLHA  +K ++ S   V  A++ +Y K   + DA   F GL    V +  A++ G  
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 327

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   + + L   M    I  +  + +   ++CA  +    G   H   IK G  +   
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++D+Y     + EA    + M K   SVSWNA IA   +N   ++ I  F++M+R 
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+FTY S+LKAC+ L SL     +H +++KS   S+  V S++++ Y KCG  ++A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +++  ++    VVSWN+++  +S N  + +A   F +M+  G++P + TF  VL  C++ 
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+
Sbjct: 567 ATIELGKQIHGQIIKQE-MLDDEYISSTLVDMYAKCGDMPDSLL 609



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 259/542 (47%), Gaps = 42/542 (7%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  Y+  GDI + VA+   MP  D+ S N L++GY +  +F ++   F+++    V P
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T++ +L  C +L  +  G Q+HA  +K          +AL+ MY KC  ++DA   F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A I G  Q+  Y + L L   M+  G+  ++ ++  A  SCA++   +
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK   +    VGTAIVD+Y+    + +A++    +       S NA + G 
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGL 326

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R     EA+  F  M+R+    D  + S +  AC+        +Q+H   +KS F+ ++
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 386

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +++++ Y KC +  +A  +F  +   D VSWN++I A  QNG     I+ F +M+  
Sbjct: 387 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-- 574
           G++P + T+ +VL AC+    ++ G  V + ++K  G+  +    S +VD+  + G +  
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDE 505

Query: 575 -----------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
                                        E A  F S   ++ +KP    +  +   C  
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +++ + I  QI++ +  DD  +  TL +MYA+ G   D+     L+  +++ K    
Sbjct: 566 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDS-----LLVFEKVEKRDFV 620

Query: 662 SW 663
           SW
Sbjct: 621 SW 622



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 190/374 (50%), Gaps = 3/374 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S C+  +    G++ H L  K+    D  V  +++++Y KC  +     + + M   D
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++A   +N  +D     F ++    ++P+ +TY ++L  C +L +++ G  +H 
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +K    S   V++ ++ MY KCG++++A+ + + +  + V+SW AI++GF  + + E+
Sbjct: 477 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 536

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             +    M + G+ P+ +TF   L +CA+L    +G   H Q+IK+ M   +++ + +VD
Sbjct: 537 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 596

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++ ++    +++ K    VSWNA I G+  +    EA+  F +M + +   +  
Sbjct: 597 MYAKCGDMPDSLLVFEKVEKR-DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655

Query: 423 TYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFS 480
           T+ ++L+ACS +      C   H      K E  +   + +++   +  G  E  + + S
Sbjct: 656 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 715

Query: 481 QLTAADVVSWNSMI 494
               AD V W +++
Sbjct: 716 MPFQADAVIWKTLL 729



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 219/500 (43%), Gaps = 61/500 (12%)

Query: 249 YLSKTAVSNALLTMYI-------------------------------KCGMMEDAESVFE 277
           ++    VSN LL MY                                  G +  A ++F+
Sbjct: 48  FVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFD 107

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G+   +V+SW A+++G+ Q G +++ + L   M   G+ P+  TF V L SC++L    +
Sbjct: 108 GMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSL 167

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  +K G+ +    G+A+VDMY     + +A      M +  + VSW A IAG  
Sbjct: 168 GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER-NWVSWGAAIAGCV 226

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N++    +E F +M R      + +Y+S  ++C+ +  L T  Q+H+  +K+KF S+  
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG+++++ Y K  S  DA R F  L    V + N+M+    + G   +A+ LF+ M+   
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           IR    +   V SAC+ +     GQ+V    +K  G   +    + ++DL G+   L  A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEA 405

Query: 578 LIFISNLPIKPTAPIWRPLFAACR--CHSDLKMAEFISKQILELDPDD----------AA 625
            +    +  K +   W  + AA     H D  +  F       + PDD          AA
Sbjct: 406 YLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464

Query: 626 VY-----VTLSNMYAEAGLQADAEEQRKLMKM----------KEISKEPGCSWIEVYNKI 670
           +      + + +   ++GL +DA     ++ M          +++    G   +  +N I
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 524

Query: 671 YRFFSQNKSHSEMPKVYEKL 690
              FS NK   E  K + ++
Sbjct: 525 LSGFSLNKESEEAQKFFSEM 544



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 33/186 (17%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+V S F     V + L++ Y +C     A RVF  +   D VSWN+M+ AYS  G    
Sbjct: 42  RMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 506 AIILFE-------------------------------KMVVEGIRPTNSTFLAVLSACSH 534
           A+ LF+                               +M   G+ P  +TF  +L +CS 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  G +V    VK  G+  +    S +VD+ G+   L+ AL F   +P +     W 
Sbjct: 162 LEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS-WG 219

Query: 595 PLFAAC 600
              A C
Sbjct: 220 AAIAGC 225


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 240/691 (34%), Positives = 369/691 (53%), Gaps = 26/691 (3%)

Query: 58  RAGLSTSDLIFNGYMNIEEKGISRNGYSTRN----DSFPDGFIDDGCSNTVPVTCYSL-- 111
           R G S  D+  N +  ++ + +   G   RN     S   G+I  G    V    + +  
Sbjct: 92  RVGTSLVDMYMNWHSVLDGRKVFE-GMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRA 150

Query: 112 ESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E +    F    VLS  + +  ++LG+  HA   K   C   FV  SL+NMYAKCG ++ 
Sbjct: 151 EGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V  +M   D+ S N L+AG   N    +A   F             TYST++ +C +
Sbjct: 211 ARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN 270

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTA 289
           L  +   +QLH+  +K  + S   V  AL+  Y K G ++ A  VF  +   +NV+SWTA
Sbjct: 271 LKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTA 330

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+G  Q+GD      L   MREDG+ PN+ T++  L    ++  +      HAQVIK  
Sbjct: 331 MIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTN 386

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 VGTA++  YS L    EA    K M      VSW+A +  + +      A  AF
Sbjct: 387 YECTPTVGTALMVSYSKLCSTEEALSIFK-MIDQKDVVSWSAMLTCYAQAGDCNGATNAF 445

Query: 410 SQMVRNDAACDEFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
            +M  +    +EFT SS + AC S    +    Q H+  +K +    + V S+L+  Y +
Sbjct: 446 IKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYAR 505

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            GS E+A+ VF + T  D++SWNSM+  Y+Q+G ++KA+ +F +M VEGI     TFL+V
Sbjct: 506 KGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSV 565

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           +  C+H+GLV++GQ+ F+ MV++YGI P   HY+CMVDL  RAGKL+  +  I  +P   
Sbjct: 566 IMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPA 625

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IWR L  ACR H ++++ +  ++++L L+P D+A YV LSN+Y+ AG   + +E RK
Sbjct: 626 GPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRK 685

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH------ 702
           LM  K++ KE GCSWI++ NK++ F + +KSH    ++Y KL+ +  +++  G+      
Sbjct: 686 LMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSF 745

Query: 703 -----TDNEKEDRVLYHSERLAVGFGLISLP 728
                 +++KE  +  HSERLA+ FGLI+ P
Sbjct: 746 VPHDVAEDQKEAMLAMHSERLALAFGLIATP 776



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 229/461 (49%), Gaps = 9/461 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++ ++  C       LG++ HAL  +     GD  V  SLV+MY     +     V + M
Sbjct: 58  LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++ +   LL GY +  +     S F ++    V PN +T+S++L++  S   +D G+
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQ 177

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +HAQ++K    S   V N+L+ MY KCG++E+A  VF  +  R+++SW  ++ G   +G
Sbjct: 178 HVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L+L    R       E T++  +  CA+L++  +    H+ V+K G      V T
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMT 297

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D Y+  G++ +A      M  S + VSW A I G  +N     A   FS+M  +  A
Sbjct: 298 ALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVA 357

Query: 419 CDEFTYSSILKA--CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
            ++ TYS+IL     S  P      QIH++++K+ +E    VG++L+ +Y+K  S E+A 
Sbjct: 358 PNDLTYSTILTVSEASFPP------QIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEAL 411

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F  +   DVVSW++M+  Y+Q G    A   F KM + G++P   T  + + AC+   
Sbjct: 412 SIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPA 471

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              D  + F ++  ++         S +V +  R G +E A
Sbjct: 472 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA 512


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 334/576 (57%), Gaps = 1/576 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+   CL  GR+ HA   K     D+ V  ++V++YAK   +         +P   + + 
Sbjct: 260 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 319

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G  +  L  +A   F  +    ++ +  + S + + C       +G+Q+H   +K
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V+NA+L +Y KC  + +A  +F+G+ Q++ +SW AII   +Q+G Y+  +  
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+ P+++T+   L +CA+LR+   G M H +VIK G+    FV + +VDMY  
Sbjct: 440 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 499

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G I EA+K    +G     VSWNA ++GF  N+++EEA + FS+M+      D FT+++
Sbjct: 500 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 558

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG   D+  VF ++   D
Sbjct: 559 VLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 618

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI  Y+ +G   +A+ +FE+M  E + P ++TF+AVL ACSH GL  DG + F 
Sbjct: 619 FVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFH 678

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M   Y + P+  H++CMVD+LGR+   + A+ FI+++P +  A IW+ L + C+   D+
Sbjct: 679 LMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDV 738

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  +  +L LDPDD++VY+ LSN+YAE+G  AD    R+L+K   + KEPGCSWIEV
Sbjct: 739 EIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEV 798

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F   +K+H    ++YE L  L+ +++  G+
Sbjct: 799 QSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 834



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 237/464 (51%), Gaps = 2/464 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     +L  CS  E L LG + HAL  KT +  D    ++LV+MY KC  +   +   
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +  S    +AG  +N  + +    F+++  + +  +  +Y++    C ++S ++
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLHA  +K ++ S   V  A++ +Y K   + DA   F GL    V +  A++ G  
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 327

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   + + L   M    I  +  + +   ++CA  +    G   H   IK G  +   
Sbjct: 328 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 387

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++D+Y     + EA    + M K   SVSWNA IA   +N   ++ I  F++M+R 
Sbjct: 388 VNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+FTY S+LKAC+ L SL     +H +++KS   S+  V S++++ Y KCG  ++A
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 506

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +++  ++    VVSWN+++  +S N  + +A   F +M+  G++P + TF  VL  C++ 
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+
Sbjct: 567 ATIELGKQIHGQIIKQE-MLDDEYISSTLVDMYAKCGDMPDSLL 609



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 259/542 (47%), Gaps = 42/542 (7%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  Y+  GDI + VA+   MP  D+ S N L++GY +  +F ++   F+++    V P
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T++ +L  C +L  +  G Q+HA  +K          +AL+ MY KC  ++DA   F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A I G  Q+  Y + L L   M+  G+  ++ ++  A  SCA++   +
Sbjct: 208 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK   +    VGTAIVD+Y+    + +A++    +       S NA + G 
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGL 326

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R     EA+  F  M+R+    D  + S +  AC+        +Q+H   +KS F+ ++
Sbjct: 327 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 386

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +++++ Y KC +  +A  +F  +   D VSWN++I A  QNG     I+ F +M+  
Sbjct: 387 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 446

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-- 574
           G++P + T+ +VL AC+    ++ G  V + ++K  G+  +    S +VD+  + G +  
Sbjct: 447 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDE 505

Query: 575 -----------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
                                        E A  F S   ++ +KP    +  +   C  
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +++ + I  QI++ +  DD  +  TL +MYA+ G   D+     L+  +++ K    
Sbjct: 566 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDS-----LLVFEKVEKRDFV 620

Query: 662 SW 663
           SW
Sbjct: 621 SW 622



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 190/374 (50%), Gaps = 3/374 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S C+  +    G++ H L  K+    D  V  +++++Y KC  +     + + M   D
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 416

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++A   +N  +D     F ++    ++P+ +TY ++L  C +L +++ G  +H 
Sbjct: 417 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 476

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +K    S   V++ ++ MY KCG++++A+ + + +  + V+SW AI++GF  + + E+
Sbjct: 477 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 536

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             +    M + G+ P+ +TF   L +CA+L    +G   H Q+IK+ M   +++ + +VD
Sbjct: 537 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 596

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++ ++    +++ K    VSWNA I G+  +    EA+  F +M + +   +  
Sbjct: 597 MYAKCGDMPDSLLVFEKVEKR-DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 655

Query: 423 TYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFS 480
           T+ ++L+ACS +      C   H      K E  +   + +++   +  G  E  + + S
Sbjct: 656 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 715

Query: 481 QLTAADVVSWNSMI 494
               AD V W +++
Sbjct: 716 MPFQADAVIWKTLL 729



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 219/500 (43%), Gaps = 61/500 (12%)

Query: 249 YLSKTAVSNALLTMYI-------------------------------KCGMMEDAESVFE 277
           ++    VSN LL MY                                  G +  A ++F+
Sbjct: 48  FVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFD 107

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G+   +V+SW A+++G+ Q G +++ + L   M   G+ P+  TF V L SC++L    +
Sbjct: 108 GMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSL 167

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  +K G+ +    G+A+VDMY     + +A      M +  + VSW A IAG  
Sbjct: 168 GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER-NWVSWGAAIAGCV 226

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N++    +E F +M R      + +Y+S  ++C+ +  L T  Q+H+  +K+KF S+  
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG+++++ Y K  S  DA R F  L    V + N+M+    + G   +A+ LF+ M+   
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 346

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           IR    +   V SAC+ +     GQ+V    +K  G   +    + ++DL G+   L  A
Sbjct: 347 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEA 405

Query: 578 LIFISNLPIKPTAPIWRPLFAACR--CHSDLKMAEFISKQILELDPDD----------AA 625
            +    +  K +   W  + AA     H D  +  F       + PDD          AA
Sbjct: 406 YLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 464

Query: 626 VY-----VTLSNMYAEAGLQADAEEQRKLMKM----------KEISKEPGCSWIEVYNKI 670
           +      + + +   ++GL +DA     ++ M          +++    G   +  +N I
Sbjct: 465 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 524

Query: 671 YRFFSQNKSHSEMPKVYEKL 690
              FS NK   E  K + ++
Sbjct: 525 LSGFSLNKESEEAQKFFSEM 544



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 33/186 (17%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+V S F  N  V + L++ Y +C     A RVF  +   D VSWN+M+ AYS  G    
Sbjct: 42  RMVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 506 AIILFE-------------------------------KMVVEGIRPTNSTFLAVLSACSH 534
           A+ LF+                               +M   G+ P  +TF  +L +CS 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  G +V    VK  G+  +    S +VD+ G+   L+ AL F   +P +     W 
Sbjct: 162 LEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS-WG 219

Query: 595 PLFAAC 600
              A C
Sbjct: 220 AAIAGC 225


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/648 (35%), Positives = 360/648 (55%), Gaps = 28/648 (4%)

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
           P+T  SL SLL+          CSR    +   + H+ +  TA+    F+  +L+N+YAK
Sbjct: 29  PLT--SLNSLLN----------CSRTS--KHATQIHSQLITTALLSLPFLFNNLLNLYAK 74

Query: 165 CGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           CG +   + +    P    ++ S   L+    +     +A +FF  +    V PNHYT+S
Sbjct: 75  CGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFS 134

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
            +L+ C   +A   G+Q+H+   K  +L++  V +AL+ MY KC  M  AE VFE +  R
Sbjct: 135 AVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVR 194

Query: 283 NVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           N++SW  +I GF Q+  Y++ +     L+ E+    +E +F+   ++CA+  N   G   
Sbjct: 195 NLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQV 254

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   +K G+    ++  ++ DMY   G   +  K     G +   V+WN  I  +  N  
Sbjct: 255 HGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTG-ARDVVTWNIMIMAYVYNHN 313

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            E+A  +F  M R  +  DE +YSS+L +C+ L +L     IH++I++S F  N+ V SS
Sbjct: 314 YEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASS 373

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y KCGS  DA ++F +    +VV W ++I A  Q+G A   + LFE+M+ EGI+P 
Sbjct: 374 LITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPD 433

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             TF++VLSACSH+G V++G   F SM+K +GI P   HY+C+VDLL RAG+L+ A  FI
Sbjct: 434 YITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFI 493

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +PIKP A +W  L +ACR HS+L M + ++ ++ +L+PD+   YV L N+    G+  
Sbjct: 494 ELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLN 553

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           +A+E R+ M+   + KEPGCSWI++ N  Y F   +KSH +  ++YE L++L + ++  G
Sbjct: 554 EADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKG 613

Query: 702 HT----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           +           +  KE  + YHSE++A+ FGL+SLPA       + L
Sbjct: 614 YVAETEFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNL 661


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/624 (33%), Positives = 350/624 (56%), Gaps = 15/624 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           ++Q + ++L  CS+    + G + HA         D  +   L++MY KC  +    +V 
Sbjct: 3   ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S   L+ GY +      + +   ++    V+PN +T+ST L  CG+L  ++
Sbjct: 63  DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q+H   +K  +   + V NA + MY KCG +  AE VF  +  RN++SW A+I G  
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG--MALG 353
             G+  K L L   M+  G  P+E+TFT  L +C +L     G   HA +I RG  +++ 
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIR 242

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           + + +AIVD+Y+  G ++EA+K    + +  + +SW+A I GF +     EA++ F Q+ 
Sbjct: 243 NIIASAIVDLYAKCGYLFEAQKVFDRI-EQKNLISWSALIQGFAQEGNLLEAMDLFRQLR 301

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            + +  D F  S ++   + L  +   +Q+H  I+K     ++ V +S+I+ Y KCG  E
Sbjct: 302 ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTE 361

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +AER+FS++   +VVSW  MI  Y ++G   KAI LF +M ++GI      +LA+LSACS
Sbjct: 362 EAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS 421

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGL+++ Q+ F  +   + + P   HY+CMVD+LGRAG+L+ A   I N+ +KP   IW
Sbjct: 422 HSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIW 481

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           + L +ACR H +L++   + + +  +D D+   YV +SN+YAEAG   + E  RKL+K K
Sbjct: 482 QTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAK 541

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHT--------- 703
            + KE G SW+E+  +I+ F+  + +H    K++E LK++ +++ E++G+          
Sbjct: 542 GLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHD 601

Query: 704 --DNEKEDRVLYHSERLAVGFGLI 725
             +  KE+ +  HSE+LA+G  L+
Sbjct: 602 VEEESKEENLRVHSEKLAIGLALV 625


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 334/576 (57%), Gaps = 1/576 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+   CL  GR+ HA   K     D+ V  ++V++YAK   +         +P   + + 
Sbjct: 302 CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS 361

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G  +  L  +A   F  +    ++ +  + S + + C       +G+Q+H   +K
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V+NA+L +Y KC  + +A  +F+G+ Q++ +SW AII   +Q+G Y+  +  
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+ P+++T+   L +CA+LR+   G M H +VIK G+    FV + +VDMY  
Sbjct: 482 FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCK 541

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G I EA+K    +G     VSWNA ++GF  N+++EEA + FS+M+      D FT+++
Sbjct: 542 CGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFAT 600

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG   D+  VF ++   D
Sbjct: 601 VLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRD 660

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI  Y+ +G   +A+ +FE+M  E + P ++TF+AVL ACSH GL  DG + F 
Sbjct: 661 FVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFH 720

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M   Y + P+  H++CMVD+LGR+   + A+ FI+++P +  A IW+ L + C+   D+
Sbjct: 721 LMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDV 780

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  +  +L LDPDD++VY+ LSN+YAE+G  AD    R+L+K   + KEPGCSWIEV
Sbjct: 781 EIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEV 840

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++++ F   +K+H    ++YE L  L+ +++  G+
Sbjct: 841 QSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 876



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 237/464 (51%), Gaps = 2/464 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     +L  CS  E L LG + HAL  KT +  D    ++LV+MY KC  +   +   
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +  S    +AG  +N  + +    F+++  + +  +  +Y++    C ++S ++
Sbjct: 250 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 309

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLHA  +K ++ S   V  A++ +Y K   + DA   F GL    V +  A++ G  
Sbjct: 310 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLV 369

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   + + L   M    I  +  + +   ++CA  +    G   H   IK G  +   
Sbjct: 370 RAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDIC 429

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++D+Y     + EA    + M K   SVSWNA IA   +N   ++ I  F++M+R 
Sbjct: 430 VNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 488

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+FTY S+LKAC+ L SL     +H +++KS   S+  V S++++ Y KCG  ++A
Sbjct: 489 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEA 548

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +++  ++    VVSWN+++  +S N  + +A   F +M+  G++P + TF  VL  C++ 
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+
Sbjct: 609 ATIELGKQIHGQIIKQE-MLDDEYISSTLVDMYAKCGDMPDSLL 651



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 259/542 (47%), Gaps = 42/542 (7%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  Y+  GDI + VA+   MP  D+ S N L++GY +  +F ++   F+++    V P
Sbjct: 130 TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 189

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T++ +L  C +L  +  G Q+HA  +K          +AL+ MY KC  ++DA   F
Sbjct: 190 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 249

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A I G  Q+  Y + L L   M+  G+  ++ ++  A  SCA++   +
Sbjct: 250 YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 309

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK   +    VGTAIVD+Y+    + +A++    +       S NA + G 
Sbjct: 310 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGL 368

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R     EA+  F  M+R+    D  + S +  AC+        +Q+H   +KS F+ ++
Sbjct: 369 VRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDI 428

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +++++ Y KC +  +A  +F  +   D VSWN++I A  QNG     I+ F +M+  
Sbjct: 429 CVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRF 488

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-- 574
           G++P + T+ +VL AC+    ++ G  V + ++K  G+  +    S +VD+  + G +  
Sbjct: 489 GMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDE 547

Query: 575 -----------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
                                        E A  F S   ++ +KP    +  +   C  
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 607

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +++ + I  QI++ +  DD  +  TL +MYA+ G   D+     L+  +++ K    
Sbjct: 608 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDS-----LLVFEKVEKRDFV 662

Query: 662 SW 663
           SW
Sbjct: 663 SW 664



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 190/374 (50%), Gaps = 3/374 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S C+  +    G++ H L  K+    D  V  +++++Y KC  +     + + M   D
Sbjct: 399 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKD 458

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++A   +N  +D     F ++    ++P+ +TY ++L  C +L +++ G  +H 
Sbjct: 459 SVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHD 518

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +K    S   V++ ++ MY KCG++++A+ + + +  + V+SW AI++GF  + + E+
Sbjct: 519 KVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEE 578

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             +    M + G+ P+ +TF   L +CA+L    +G   H Q+IK+ M   +++ + +VD
Sbjct: 579 AQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVD 638

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++ ++    +++ K    VSWNA I G+  +    EA+  F +M + +   +  
Sbjct: 639 MYAKCGDMPDSLLVFEKVEKR-DFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHA 697

Query: 423 TYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFS 480
           T+ ++L+ACS +      C   H      K E  +   + +++   +  G  E  + + S
Sbjct: 698 TFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINS 757

Query: 481 QLTAADVVSWNSMI 494
               AD V W +++
Sbjct: 758 MPFQADAVIWKTLL 771



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 219/500 (43%), Gaps = 61/500 (12%)

Query: 249 YLSKTAVSNALLTMYI-------------------------------KCGMMEDAESVFE 277
           ++    VSN LL MY                                  G +  A ++F+
Sbjct: 90  FVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFD 149

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G+   +V+SW A+++G+ Q G +++ + L   M   G+ P+  TF V L SC++L    +
Sbjct: 150 GMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSL 209

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  +K G+ +    G+A+VDMY     + +A      M +  + VSW A IAG  
Sbjct: 210 GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER-NWVSWGAAIAGCV 268

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N++    +E F +M R      + +Y+S  ++C+ +  L T  Q+H+  +K+KF S+  
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 328

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG+++++ Y K  S  DA R F  L    V + N+M+    + G   +A+ LF+ M+   
Sbjct: 329 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSS 388

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           IR    +   V SAC+ +     GQ+V    +K  G   +    + ++DL G+   L  A
Sbjct: 389 IRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS-GFDVDICVNNAVLDLYGKCKALMEA 447

Query: 578 LIFISNLPIKPTAPIWRPLFAACR--CHSDLKMAEFISKQILELDPDD----------AA 625
            +    +  K +   W  + AA     H D  +  F       + PDD          AA
Sbjct: 448 YLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAA 506

Query: 626 VY-----VTLSNMYAEAGLQADAEEQRKLMKM----------KEISKEPGCSWIEVYNKI 670
           +      + + +   ++GL +DA     ++ M          +++    G   +  +N I
Sbjct: 507 LRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAI 566

Query: 671 YRFFSQNKSHSEMPKVYEKL 690
              FS NK   E  K + ++
Sbjct: 567 LSGFSLNKESEEAQKFFSEM 586



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 33/186 (17%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+V S F     V + L++ Y +C     A RVF  +   D VSWN+M+ AYS  G    
Sbjct: 84  RMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 143

Query: 506 AIILFE-------------------------------KMVVEGIRPTNSTFLAVLSACSH 534
           A+ LF+                               +M   G+ P  +TF  +L +CS 
Sbjct: 144 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 203

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  G +V    VK  G+  +    S +VD+ G+   L+ AL F   +P +     W 
Sbjct: 204 LEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS-WG 261

Query: 595 PLFAAC 600
              A C
Sbjct: 262 AAIAGC 267


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/622 (33%), Positives = 354/622 (56%), Gaps = 46/622 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
           + F   ++++ Y+K GD+ +M  +   MP  D  S N L++GY       +A   +  + 
Sbjct: 70  NSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMM 129

Query: 210 -DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY----- 263
            DG+ +  N  T+STML +  S   +D G+Q+H Q +K  + +   V ++L+ MY     
Sbjct: 130 KDGV-LNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGL 188

Query: 264 --------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                                     ++ GM++D++ +F G+ +R+ ISWT +I G  Q+
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + + L   MR++G+  ++YTF   L +C  LR    G   H  +I+ G     FVG
Sbjct: 249 GLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG 308

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY     +  A+   K M  + + VSW A + G+ +N  +EEA+  F  M RN  
Sbjct: 309 SALVDMYCKCRSVRYAEAVFKRMA-NKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGI 367

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+FT  S++ +C+ L SL    Q H + + S   S + V ++LI  Y KCGS ED+ +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQ 427

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F +++  D VSW +++  Y+Q G+A + I LFE+M+V+G++P   TF+AVLSACS +GL
Sbjct: 428 LFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGL 487

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V+ GQ+ FESM+K++GI+P   HY+CM+DL GRAG+LE A  FI+ +P  P +  W  L 
Sbjct: 488 VERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLL 547

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           ++CR + + ++ ++ ++ +LELDP + A Y+ LS++YA  G  ++  + R+ M+ K   K
Sbjct: 548 SSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARK 607

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
           EPG SWI+  +K+Y F + ++S     ++Y +L++L  ++ + G+            D+E
Sbjct: 608 EPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSE 667

Query: 707 KEDRVLYHSERLAVGFGLISLP 728
           K   + +HSE+LA+ FGL+ +P
Sbjct: 668 KMKMLNHHSEKLAIAFGLLFIP 689



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 225/483 (46%), Gaps = 61/483 (12%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
           ++F+  P R G+S + LI +GY+     G       T N    DG ++            
Sbjct: 92  EIFSIMPNRDGVSWNSLI-SGYVCY---GSVVEAVKTYNSMMKDGVLN------------ 135

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI- 168
                L++     +L   S + C++LGR+ H  I K       FV +SLV+MYAK G + 
Sbjct: 136 -----LNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVS 190

Query: 169 --------------------------KSMVAVVKQ----MPYLDIASCNCLLAGYAKNAL 198
                                       MV   K+    M   D  S   ++ G  +N L
Sbjct: 191 VASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGL 250

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             +A   F  +    +  + YT+ ++L  CG L A+ EGK++H   ++  Y     V +A
Sbjct: 251 EAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSA 310

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY KC  +  AE+VF+ +  +NV+SWTA++ G+ Q+G  E+ +R+ C M+ +GI+P+
Sbjct: 311 LVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPD 370

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           ++T    ++SCA+L +   G  FH Q +  G+     V  A++ +Y   G I ++ +   
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFD 430

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           EM      VSW A ++G+ +  K  E I+ F +M+      D  T+ ++L ACS    + 
Sbjct: 431 EM-SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVE 489

Query: 439 TCEQIHSRIVKSK----FESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
             +Q    ++K      F  +    + +I+ + + G  E+A+   +++  + D + W ++
Sbjct: 490 RGQQYFESMLKDHGIIPFSDHY---TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATL 546

Query: 494 IKA 496
           + +
Sbjct: 547 LSS 549



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 185/402 (46%), Gaps = 63/402 (15%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           + K+LH   +K     +T + N L+  Y K G +  A  VF+ + Q N  SW  +++ + 
Sbjct: 23  QAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYS 82

Query: 296 QHGDYEK--------PLR-----------LVC-------------LMREDGIDPNEYTFT 323
           + GD           P R            VC             +M++  ++ N  TF+
Sbjct: 83  KSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFS 142

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG-- 381
             L   +S     +G   H Q++K G     FVG+++VDMY+ +G +  A +   E+   
Sbjct: 143 TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202

Query: 382 ----------------------------KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                                       K   S+SW   I G  +N    EA++ F  M 
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           +   A D++T+ S+L AC  L +L   ++IH+ I++S +  NV VGS+L++ Y KC S  
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            AE VF ++   +VVSW +M+  Y QNG + +A+ +F  M   GI P + T  +V+S+C+
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +   +++G + F       G++      + ++ L G+ G +E
Sbjct: 383 NLASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIE 423



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 62/284 (21%)

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS--- 385
           C   RN       H  +IK       F+   +++ YS LG I  A+    +M +  S   
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 386 ---------------------------SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
                                       VSWN+ I+G+       EA++ ++ M+++   
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 419 -CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK--------- 468
             +  T+S++L   S    +    QIH +IVK  F + V VGSSL++ Y K         
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 469 ----------------------CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
                                  G  +D++R+F  +   D +SW +MI    QNG   +A
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           + LF  M  EG+     TF +VL+AC     +++G+++   +++
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIR 298



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 33/181 (18%)

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           K C    +    +++H  I+KS       + ++LI AY+K G+   A  VF ++   +  
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 489 SWNSMIKAYSQNGRARKAIILFEKM--------------------VVEGIRPTNS----- 523
           SWN+M+ AYS++G       +F  M                    VVE ++  NS     
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 524 -------TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
                  TF  +L   S  G V  G+++   +VK +G        S +VD+  + G + +
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVK-FGFGAYVFVGSSLVDMYAKMGLVSV 191

Query: 577 A 577
           A
Sbjct: 192 A 192


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/626 (33%), Positives = 355/626 (56%), Gaps = 19/626 (3%)

Query: 123 VLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C + + +E+GRR H +++  T  C D  +   ++ MY+ CG       V  ++   
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++   N +++ Y +N LF+ A S F +L  + + +P+++T   ++  C  L  +  G+ +
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGD 299
           H    K+  +S   V NAL+ MY KCG++E+A + VF+ +  + V SW A++ G+ Q+ D
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             K L L   M + G+DP+ +T    L +C+ +++ H G   H   ++ G+A+  F+G +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ +Y   G+ + A+     M +  S VSWN  IAG+ +N   +EAI  F QM+ +    
Sbjct: 351 LLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            E     +  ACS L +L   +++H   +K+    ++ V SS+I+ Y K G    ++R+F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            +L   DV SWN +I  Y  +GR ++A+ LFEKM+  G++P + TF  +L ACSH+GLV+
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           DG + F  M+  + I P+  HY+C+VD+LGRAG+++ AL  I  +P  P + IW  L ++
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H +L + E ++ ++LEL+P+    YV +SN++A +G   D    R  MK   + K+ 
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRV 711
           GCSWIEV  K++ F   ++   E+ +V E  ++L  +I  IG+T        D E+ED++
Sbjct: 650 GCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEEDKI 709

Query: 712 LY---HSERLAVGFGLIS----LPAK 730
                HSE+LA+ FGL++    LP +
Sbjct: 710 GILRGHSEKLAISFGLLNTAKGLPVR 735


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/632 (34%), Positives = 353/632 (55%), Gaps = 22/632 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL   + E  +E G + HA+I K       FV  +L+ MY K   +    AV   M   D
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N ++ GYA    + + F  F ++    V+ +   + T L +C     ++  KQLH 
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-GLVQRNVISWTAIINGFKQHGDYE 301
             +K  Y     +  AL+  Y KC  +++A  +F       NV++WTA+I GF Q+ + E
Sbjct: 331 GVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNE 390

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K + L C M  +G+ PN +T++  LA     + S +    HAQ+IK        V TA++
Sbjct: 391 KAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATALL 446

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D Y   G + E+ +    +  +   V+W+A + G  + + +E+A+E F Q+V+     +E
Sbjct: 447 DAYVKTGNVVESARVFYSI-PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505

Query: 422 FTYSSILKACSLLPSLATCE---QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           +T+SS++ ACS   S AT E   QIH+  VKS   + + V S+L+  Y+K G+ E AE+V
Sbjct: 506 YTFSSVINACS--SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKV 563

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F++    D+VSWNSMI  Y Q+G A+KA+ +F+ M  +G+   + TF+ VL+AC+H+GLV
Sbjct: 564 FTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLV 623

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+K F  M+K+Y I  +  HYSCMVDL  RAG  + A+  I+ +P   +  IWR L A
Sbjct: 624 EEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLA 683

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H +L++ +  +++++ L P+DA  YV LSN++A AG   +    RKLM  +++ KE
Sbjct: 684 ACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKE 743

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEK 707
            GCSWIE+ N+I+ F + + SH     VY KL++L  +++D+G+            +  K
Sbjct: 744 AGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHK 803

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           E  +  HSERLA+ +GLI+LP     +  + L
Sbjct: 804 EAILSQHSERLAIAYGLIALPPGAPIQIEKNL 835



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 261/523 (49%), Gaps = 18/523 (3%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +GR+ H    K+    D  V  SLV+MY K  D +    +  +M   ++ S   LL+GYA
Sbjct: 122 VGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYA 181

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N L D+      ++    V PN +T++T+L      S I+ G Q+HA  +K  +   T 
Sbjct: 182 RNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTF 241

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V NAL+ MY+K  M+ DAE+VF+ +V R+ ++W  +I G+   G Y +  ++   MR  G
Sbjct: 242 VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  +   F  AL  C+  R  +     H  V+K G      + TA++  YS    + EA 
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL--KACS 432
           K       + + V+W A I GF +N   E+A++ F QM R     + FTYS++L  K  S
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
           LL       Q+H++I+K+ +E    V ++L++AY K G+  ++ RVF  + A D+V+W++
Sbjct: 422 LL------SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS-GLVQDGQKVFESMVKE 551
           M+   +Q   + KA+ +F ++V EG++P   TF +V++ACS S   V+ G+++  + VK 
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-- 609
            G        S ++ +  + G +E A    +    +     W  +      H D K A  
Sbjct: 536 -GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVS-WNSMITGYGQHGDAKKALE 593

Query: 610 --EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             + +  Q L   P D   ++ +      AGL  + E+   +M
Sbjct: 594 VFQIMQNQGL---PLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 209/413 (50%), Gaps = 9/413 (2%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           + P  DI+  N LL  +++N    +A   F  L    +  +  T S  L +CG L     
Sbjct: 63  ETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVV 122

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+Q+H Q++K  +L   +V  +L+ MY+K    ED   +F+ +  +NV+SWT++++G+ +
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G  ++ + L+  M+ +G++PN +TF   L + A       G   HA ++K G     FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             A++ MY     + +A+     M     SV+WN  I G+       E  + F +M    
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSM-VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                  + + LK CS    L   +Q+H  +VK+ +E    + ++L+  Y+KC S ++A 
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361

Query: 477 RVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ++FS   AA +VV+W +MI  + QN    KA+ LF +M  EG+RP + T+  VL+    S
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK-LEIALIFISNLPIK 587
            L Q   ++ ++    Y  +P  A  + ++D   + G  +E A +F S +P K
Sbjct: 422 LLSQLHAQIIKAY---YEKVPSVA--TALLDAYVKTGNVVESARVFYS-IPAK 468



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 205/420 (48%), Gaps = 11/420 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L +      L  CS++  L   ++ H  + K      Q +  +L+  Y+KC  +     +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
                   ++ +   ++ G+ +N   ++A   F ++    V+PNH+TYST+LA  G  S+
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA--GKPSS 421

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +    QLHAQ +K  Y    +V+ ALL  Y+K G + ++  VF  +  +++++W+A++ G
Sbjct: 422 LL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMAL 352
             Q  D EK + +   + ++G+ PNEYTF+  + +C+S   +   G   HA  +K G + 
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSN 539

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V +A++ MYS  G I  A+K      +    VSWN+ I G+ ++   ++A+E F  M
Sbjct: 540 ALCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGDAKKALEVFQIM 598

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGS 471
                  D+ T+  +L AC+    +   E+  + ++K    +  +   S +++ Y++ G 
Sbjct: 599 QNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGM 658

Query: 472 WEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           ++ A  + + +   A    W +++ A   +       +  EK+V   ++P ++    +LS
Sbjct: 659 FDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLV--SLQPNDAVGYVLLS 716



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 12/281 (4%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  +F+    +++  +  ++  F ++    + L L   +   G+  +  T + AL  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L +  +G   H Q +K G      VGT++VDMY    +  + +    EMG   + VSW +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK-NVVSWTS 175

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            ++G+ RN   +E I   +QM       + FT++++L A +    +    Q+H+ IVK+ 
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           FE    V ++LI  Y K     DAE VF  +   D V+WN MI  Y+  G   +   +F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 512 KMVVEGIRPTNSTFLAVLSACS-----------HSGLVQDG 541
           +M + G++ + + F   L  CS           H G+V++G
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/652 (32%), Positives = 354/652 (54%), Gaps = 29/652 (4%)

Query: 83  GYSTRNDSFPDGF------IDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELG 136
           GY  RND F +G       +D+G   +      +  S             C+     ELG
Sbjct: 245 GY-VRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRS-------------CAGLSAFELG 290

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
            + HA   KT    D  V  + ++MYAKC  +     V    P     S N L+ GYA+ 
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +A   F  L    +  +  + S  L  C ++    EG QLH   +K        V+
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N +L MY KCG + +A  +F+ +  ++ +SW AII   +Q+   E+ L L   M    ++
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P++YTF   + +CA  +  + G   H +VIK GM L  FVG+AI+DMY   G + EA+K 
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK- 529

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           + E  +  ++VSWN+ I+GF   ++ E A+  FS+M++     D FTY+++L  C+ L +
Sbjct: 530 IHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLAT 589

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           +   +QIH +I+K +  S+V++ S++++ Y+KCG+ +D+  +F +    D V+W++MI A
Sbjct: 590 VELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICA 649

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+ +G    AI LFE+M ++ ++P ++ F++VL AC+H G V  G   F  M   YG+ P
Sbjct: 650 YAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDP 709

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           +  HYSCMVDLLGR+G++  AL  I ++P +    IWR L   CR   ++++AE  +  +
Sbjct: 710 QMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSL 769

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           L+LDP D++ YV LSN+YA AG+  +  + R  MK  ++ KEPGCSWI+V ++++ F   
Sbjct: 770 LQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVG 829

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVLYHSERLAV 720
           +K+H    ++Y++   L+ +++  G+         D E +++  Y   ++ V
Sbjct: 830 DKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQDSYEGHKITV 881



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 269/575 (46%), Gaps = 30/575 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A  +F+K P+R  +S + +IF GY  +     ++  +    DS P+    D  S    ++
Sbjct: 92  AFNVFDKMPQRDVISWNTMIF-GYAGVGNMEFAQFLF----DSMPE---RDVVSWNSMLS 143

Query: 108 CY--------SLESLLDKQFVIE----------VLSYCSREECLELGRRYHALITKTAVC 149
           CY        S+E +  K  ++E          VL  C+  E   LG + H L  +    
Sbjct: 144 CYLQNGFHRKSIE-IFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFD 202

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            D     +LV+MY+ C  +     +  +MP  +    + ++AGY +N  F +    +  +
Sbjct: 203 SDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVM 262

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               +  +  T+++    C  LSA + G QLHA  +K  +     V  A L MY KC  M
Sbjct: 263 LDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRM 322

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            DA  VF         S  A+I G+ +     + L +   +++  +D +E + + AL +C
Sbjct: 323 VDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC 382

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           ++++    G   H   +K G+     V   I+DMY+  G + EA     +M +   +VSW
Sbjct: 383 SAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDM-EIKDAVSW 441

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA IA   +N+  EE +  F  M+R+    D++T+ S++KAC+   +L    ++H R++K
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S    +  VGS++I+ Y KCG   +AE++  +L     VSWNS+I  +S   +   A+  
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +M+  G+ P N T+  VL  C++   V+ G+++   ++K   +  +    S +VD+  
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYIASTIVDMYS 620

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           + G ++ + I     P K     W  +  A   H 
Sbjct: 621 KCGNMQDSRIMFEKAP-KRDYVTWSAMICAYAYHG 654



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 230/484 (47%), Gaps = 33/484 (6%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +   CS  + +  G++ HA IT T      FV+  L+  Y KC ++     V  +MP  
Sbjct: 43  HIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQR 102

Query: 182 DIASCNCLLAGYA-------------------------------KNALFDQAFSFFLKLD 210
           D+ S N ++ GYA                               +N    ++   F K+ 
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            +++Q ++ T++ +L  C  +     G Q+H   +++ + S      AL+ MY  C  ++
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A ++F  + +RN + W+A+I G+ ++  + + L+L  +M ++G+  ++ TF  A  SCA
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L    +G   HA  +K      + VGTA +DMY+    + +A+K       + +  S N
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF-PNPTRQSHN 341

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I G+ R  +  EA+E F  + ++    DE + S  L ACS +       Q+H   VK 
Sbjct: 342 ALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKC 401

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             + N+ V +++++ Y KCG+  +A  +F  +   D VSWN++I A+ QN    + + LF
Sbjct: 402 GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALF 461

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M+   + P + TF +V+ AC+    +  G +V   ++K  G+  +    S ++D+  +
Sbjct: 462 VSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKS-GMGLDWFVGSAIIDMYCK 520

Query: 571 AGKL 574
            G L
Sbjct: 521 CGML 524



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/539 (24%), Positives = 238/539 (44%), Gaps = 46/539 (8%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC------------- 266
           T+S +   C +L AI+ GKQ HAQ     ++    VSN LL  Y KC             
Sbjct: 40  TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99

Query: 267 ------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
                             G ME A+ +F+ + +R+V+SW ++++ + Q+G + K + +  
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MR   I  +  TF V L +C  + +  +G   H   I+ G       GTA+VDMYS   
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A     EM +  +SV W+A IAG+ RN +  E ++ +  M+       + T++S  
Sbjct: 220 KLDHAFNIFCEMPER-NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++C+ L +     Q+H+  +K+ F  +  VG++ ++ Y KC    DA +VF+        
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           S N++I  Y++  +  +A+ +F  +    +     +    L+ACS      +G ++    
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC--HSDL 606
           VK  G+       + ++D+  + G L  A +   ++ IK  A  W  + AA     H + 
Sbjct: 399 VK-CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKD-AVSWNAIIAAHEQNEHVEE 456

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            +A F+S     ++PDD      +     +  L    E   +++K        G  W  V
Sbjct: 457 TLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK-----SGMGLDWF-V 510

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLM----QQIEDIGHTDNEKEDRVLYHSERLAVG 721
            + I   + +     E  K++E+L++        I     ++ + E+ + Y S  L VG
Sbjct: 511 GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG 569



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 33/210 (15%)

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + T+S I + CS L ++   +Q H++I  + F   V V + L++ Y KC +   A  VF 
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 481 QLTAADVVSWNSMIKAYS-------------------------------QNGRARKAIIL 509
           ++   DV+SWN+MI  Y+                               QNG  RK+I +
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F KM +  I+   +TF  VL AC+       G +V   +  + G   +    + +VD+  
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV-HCLAIQMGFDSDVVTGTALVDMYS 216

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
              KL+ A      +P + +   W  + A 
Sbjct: 217 TCKKLDHAFNIFCEMPERNSV-CWSAVIAG 245


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 220/633 (34%), Positives = 353/633 (55%), Gaps = 22/633 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL   + E  +E G + HA+I K       FV  +L+ MY K   +    AV   M   D
Sbjct: 211 VLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRD 270

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N ++ GYA    + + F  F ++    V+ +   + T L +C     ++  KQLH 
Sbjct: 271 SVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHC 330

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-GLVQRNVISWTAIINGFKQHGDYE 301
             +K  Y     +  AL+  Y KC  +++A  +F       NV++WTA+I GF Q+ + +
Sbjct: 331 GVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNK 390

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K + L C M  +G+ PN +T++  LA     + S +    HAQ+IK        V TA++
Sbjct: 391 KAVDLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATALL 446

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D Y   G + E+ +    +  +   V+W+A + G  + + +E+A+E F Q+V+     +E
Sbjct: 447 DAYVKTGNVVESARVFYSI-PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505

Query: 422 FTYSSILKACSLLPSLATCE---QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           +T+SS++ ACS   S AT E   QIH+  VKS   + + V S+L+  Y+K G+ E AE+V
Sbjct: 506 YTFSSVINACS--SSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKV 563

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F++    D+VSWNSMI  Y Q+G A+KA+ +F+ M  +G+   + TF+ VL+AC+H+GLV
Sbjct: 564 FTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLV 623

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+K F  M+K+Y I  +  HYSCMVDL  RAG  + A+  I+ +P   +  IWR L A
Sbjct: 624 EEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLA 683

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H +L++ +  +++++ L P+DA  YV LSN++A AG   +    RKLM  +++ KE
Sbjct: 684 ACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKE 743

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEK 707
            GCSWIE+ N+I+ F + + SH     VY KL++L  +++D+G+            +  K
Sbjct: 744 AGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHK 803

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           E  +  HSERLA+ +GLI+LP     +  + L 
Sbjct: 804 EAILSQHSERLAIAYGLIALPPGAPIQIEKNLR 836



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 154/523 (29%), Positives = 261/523 (49%), Gaps = 18/523 (3%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +GR+ H    K+    D  V  SLV+MY K  D +    +  +M   ++ S   LL+GYA
Sbjct: 122 VGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYA 181

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N L D+      ++    V PN +T++T+L      S I+ G Q+HA  +K  +   T 
Sbjct: 182 RNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTF 241

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V NAL+ MY+K  M+ DAE+VF+ +V R+ ++W  +I G+   G Y +  ++   MR  G
Sbjct: 242 VCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  +   F  AL  C+  R  +     H  V+K G      + TA++  YS    + EA 
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL--KACS 432
           K       + + V+W A I GF +N   ++A++ F QM R     + FTYS++L  K  S
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
           LL       Q+H++I+K+ +E    V ++L++AY K G+  ++ RVF  + A D+V+W++
Sbjct: 422 LL------SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSA 475

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS-GLVQDGQKVFESMVKE 551
           M+   +Q   + KA+ +F ++V EG++P   TF +V++ACS S   V+ G+++  + VK 
Sbjct: 476 MLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS 535

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-- 609
            G        S ++ +  + G +E A    +    +     W  +      H D K A  
Sbjct: 536 -GKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVS-WNSMITGYGQHGDAKKALE 593

Query: 610 --EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             + +  Q L   P D   ++ +      AGL  + E+   +M
Sbjct: 594 VFQIMQNQGL---PLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 210/413 (50%), Gaps = 9/413 (2%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           + P  DI+  N LL  +++N    +A   F  L    +  +  T S  L +CG L     
Sbjct: 63  ETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVV 122

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+Q+H Q++K  +L   +V  +L+ MY+K    ED   +F+ +  +NV+SWT++++G+ +
Sbjct: 123 GRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYAR 182

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G  ++ + L+  M+ +G++PN +TF   L + A       G   HA ++K G     FV
Sbjct: 183 NGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFV 242

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             A++ MY     + +A+     M     SV+WN  I G+       E  + F +M    
Sbjct: 243 CNALICMYLKSEMVGDAEAVFDSM-VVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAG 301

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                  + + LK CS    L   +Q+H  +VK+ +E    + ++L+  Y+KC S ++A 
Sbjct: 302 VKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAF 361

Query: 477 RVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ++FS   AA +VV+W +MI  + QN   +KA+ LF +M  EG+RP + T+  VL+    S
Sbjct: 362 KLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSS 421

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK-LEIALIFISNLPIK 587
            L Q   ++ ++    Y  +P  A  + ++D   + G  +E A +F S +P K
Sbjct: 422 LLSQLHAQIIKAY---YEKVPSVA--TALLDAYVKTGNVVESARVFYS-IPAK 468



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 203/420 (48%), Gaps = 11/420 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L +      L  CS++  L   ++ H  + K      Q +  +L+  Y+KC  +     +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
                   ++ +   ++ G+ +N    +A   F ++    V+PNH+TYST+LA  G  S+
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA--GKPSS 421

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +    QLHAQ +K  Y    +V+ ALL  Y+K G + ++  VF  +  +++++W+A++ G
Sbjct: 422 LLS--QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMAL 352
             Q  D EK + +   + ++G+ PNEYTF+  + +C+S   +   G   HA  +K G + 
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSN 539

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V +A++ MYS  G I  A+K      +    VSWN+ I G+ ++   ++A+E F  M
Sbjct: 540 ALCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGDAKKALEVFQIM 598

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGS 471
                  D+ T+  +L AC+    +   E+  + ++K    +      S +++ Y++ G 
Sbjct: 599 QNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGM 658

Query: 472 WEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           ++ A  + + +   A    W +++ A   +       +  EK+V   ++P ++    +LS
Sbjct: 659 FDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLV--SLQPNDAVGYVLLS 716



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 12/281 (4%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  +F+    +++  +  ++  F ++    + L L   +   G+  +  T + AL  C  
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L +  +G   H Q +K G      VGT++VDMY    +  + +    EMG   + VSW +
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK-NVVSWTS 175

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            ++G+ RN   +E I   +QM       + FT++++L A +    +    Q+H+ IVK+ 
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           FE    V ++LI  Y K     DAE VF  +   D V+WN MI  Y+  G   +   +F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 512 KMVVEGIRPTNSTFLAVLSACS-----------HSGLVQDG 541
           +M + G++ + + F   L  CS           H G+V++G
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNG 336


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/628 (31%), Positives = 342/628 (54%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L+ G+  H  +   +   + F    +VNMYAKC  I     +  +MP  D
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERD 212

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++AG+++N    +A    L++     +P+  T  T+L     +  +  GK +H 
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  +     +S AL  MY KCG +E A  +F+G+ Q+ V+SW ++++G+ Q+G+ EK
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M E+GIDP   T   AL +CA L +   G   H  V +  +     V  +++ 
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    +  A      +    + VSWNA I G+ +N +  EA+  FS+M       D F
Sbjct: 393 MYSKCKRVDIASDIFNNL-NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S++ A + L      + IH  I++S  + N+ V ++L++ Y+KCG+   A ++F  +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +   V++WN+MI  Y  +G  R A+ LF+KM    + P + T+L+V+SACSHSGLV +G 
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F+SM ++YG+ P   HY  MVDLLGRAG+++ A  FI N+PI P   ++  +  AC+ 
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKI 631

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  +K++ EL+PD+   +V L+N+YA     +   E RK M+ K + K PGCS
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ F+S + +H +  ++Y  L++L+ +I+  G+           D+ +E  + 
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLN 751

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ FGL++          + L 
Sbjct: 752 SHSEKLAIAFGLLNTSPGTTIHVRKNLR 779



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 222/439 (50%), Gaps = 8/439 (1%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
           L+ K  +  +      LV++++K G I     V + +     A  + +L GYAKN+  + 
Sbjct: 71  LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A +F  ++   DV+P  Y ++ +L +CG  + +  GK++H Q +   + +       ++ 
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KC  ++DA  +F+ + +R+++SW  II GF Q+G  +K L LV  M+++G  P+  T
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L + A +    +G   H   I+ G A    + TA+ DMYS  G +  A+     M 
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           +  + VSWN+ + G+ +N + E+AI  F +M+         T    L AC+ L  L   +
Sbjct: 311 QK-TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            +H  + +    S++ V +SLI  Y+KC   + A  +F+ L     VSWN+MI  Y+QNG
Sbjct: 370 FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNG 429

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPEE 558
           R  +A+  F +M   G++P + T ++V+ A +   + +  + +   +++   +  I    
Sbjct: 430 RVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT 489

Query: 559 AHYSCMVDLLGRAGKLEIA 577
           A    +VD+  + G + +A
Sbjct: 490 A----LVDMYSKCGAIHMA 504



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 216 PNH---YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           P+H   +  + +L +C S+    E  Q+    +K    ++      L++++ K G + +A
Sbjct: 44  PSHVYKHPAAVLLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEA 100

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VFE +  +    +  ++ G+ ++   E  L  +C MR D + P  Y FT  L  C   
Sbjct: 101 ARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H Q+I    A   F  T +V+MY+   +I +A K    M +    VSWN  
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-DLVSWNTI 219

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAGF +N   ++A+E   +M       D  T  ++L A + +  L   + IH   +++ F
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
              V++ ++L + Y+KCGS E A  +F  +    VVSWNSM+  Y QNG   KAI +FEK
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+ EGI PT  T +  L AC+  G ++ G K     V +  +  + +  + ++ +  +  
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCK 398

Query: 573 KLEIALIFISNL 584
           +++IA    +NL
Sbjct: 399 RVDIASDIFNNL 410



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 126/520 (24%), Positives = 228/520 (43%), Gaps = 63/520 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F++ P+R  +S + +I          G S+NG++ +         D+G        
Sbjct: 201 AYKMFDRMPERDLVSWNTII---------AGFSQNGFAKKALELVLRMQDEG-------- 243

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   ++ VL   +    L +G+  H    +        ++ +L +MY+KCG 
Sbjct: 244 -----QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTML 225
           +++   +   M    + S N ++ GY +N   ++A + F K+  +GID  P   T    L
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID--PTGVTIMEAL 356

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  ++ GK +H    +L   S  +V N+L++MY KC  ++ A  +F  L  R  +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G+ Q+G   + L     M+  G+ P+ +T    + + A L  +      H  +
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+  +    FV TA+VDMYS  G I  A+K L +M      ++WNA I G+  +     A
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARK-LFDMISDRHVITWNAMIDGYGTHGLGRAA 535

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F +M +     ++ TY S++ ACS           HS +V    +  +    S+ + 
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACS-----------HSGLV----DEGLRHFKSMKQD 580

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y    S +                + +M+    + GR ++A    E M    I P  + +
Sbjct: 581 YGLEPSMD---------------HYGAMVDLLGRAGRIKEAWDFIENM---PISPGITVY 622

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
            A+L AC     ++ G+K  +   K + + P+E  Y  ++
Sbjct: 623 GAMLGACKIHKNIEVGEKAAK---KLFELNPDEGGYHVLL 659


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/681 (32%), Positives = 356/681 (52%), Gaps = 77/681 (11%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---DIK 169
           S LD     ++L  C + + +   R  HA I KT    + F+   LV++Y KCG   D +
Sbjct: 15  SFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDAR 74

Query: 170 SMVAVVKQ----------------------------MPYLDIASCNCLLAGYAKNALFDQ 201
            +   ++Q                            MP  D  S N +++G+A+   F++
Sbjct: 75  KVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEE 134

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A  F + +   D   N Y++ + L+ C  L  +  G Q+H    K +Y     + +AL+ 
Sbjct: 135 ALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVD 194

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KC ++  A+  F+ +  RN++SW ++I  ++Q+G   K L +   M   GI+P+E T
Sbjct: 195 MYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM 380
                ++CASL     G   HA+V+K      D V G A+VDMY+    + EA+     M
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 381 -------------GKSASS-----------------VSWNAQIAGFFRNQKTEEAIEAFS 410
                        G + +S                 VSWNA IAG+ +N + EEA+  F 
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIE 464
            + R       +T+ ++L AC+ L  L    Q H+ I+K  F      +S++ VG+SLI+
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y KCG  ED   VF ++   D VSWN+MI  Y+QNG   +A+ +F +M+V G RP + T
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
            + VLSACSH+GLV++G+  F+SM  E+G++P + HY+CMVDLLGRAG L+ A   I  +
Sbjct: 495 MIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P++P A +W  L AAC+ H ++ + +++++++LE+DP ++  YV LSNMYAE G   D  
Sbjct: 555 PMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVV 614

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT- 703
             RK M+   + K+PGCSWI + + ++ F  ++K H     +Y  LK L +Q++ +G+  
Sbjct: 615 RVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVP 674

Query: 704 --------DNEKEDRVLYHSE 716
                   + E +  ++ HSE
Sbjct: 675 EADDDEPYEEESDSELILHSE 695



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 234/494 (47%), Gaps = 47/494 (9%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V  +S + +L++      LS C+    L +G + H LI K+    D ++ ++LV+MY+KC
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC 199

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
             + S       M   +I S N L+  Y +N    +A   F+++    ++P+  T +++ 
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVA 259

Query: 226 AICGSLSAIDEGKQLHAQTMKL-QYLSKTAVSNALLTMYIKCGMMEDAESVFE------- 277
           + C SLSAI EG Q+HA+ MK  +Y +   + NAL+ MY KC  + +A  VF+       
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDV 319

Query: 278 ------------------------GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
                                    +++RNV+SW A+I G+ Q+G+ E+ +RL  L++ +
Sbjct: 320 VSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRE 379

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD------FVGTAIVDMYSGL 367
            I P  YTF   L +CA+L +  +G   H  ++K G           FVG +++DMY   
Sbjct: 380 SIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKC 439

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G + + +   + M +   +VSWNA I G+ +N    EA+E F +M+ +    D  T   +
Sbjct: 440 GLVEDGRLVFERMLER-DNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGV 498

Query: 428 LKACSL--LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TA 484
           L ACS   L     C    S  ++          + +++   + G  ++A  +   +   
Sbjct: 499 LSACSHAGLVEEGRC-YFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPME 557

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQK 543
            D V W S++ A   +G       + E+++   I P NS    +LS   +  G  +D  +
Sbjct: 558 PDAVVWGSLLAACKVHGNITLGKYVAERLL--EIDPLNSGPYVLLSNMYAELGRWKDVVR 615

Query: 544 VFESMVKEYGILPE 557
           V + M ++ G++ +
Sbjct: 616 VRKQM-RQMGVIKQ 628



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 128/269 (47%), Gaps = 23/269 (8%)

Query: 51  LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYST---RN----DSFPDGFIDDGCSNT 103
           +F++ P R  +S + ++ +GY        +R  +S    RN    ++   G+  +G  N 
Sbjct: 310 VFDRMPLRDVVSETSMV-SGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNG-ENE 367

Query: 104 VPVTCYSL---ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVC------GDQF 153
             V  + L   ES+    +    +L+ C+    L+LGR+ H  I K           D F
Sbjct: 368 EAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIF 427

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V  SL++MY KCG ++    V ++M   D  S N ++ GYA+N    +A   F ++    
Sbjct: 428 VGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSG 487

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--LSKTAVSNALLTMYIKCGMMED 271
            +P+H T   +L+ C     ++EG+  + Q+M +++  +        ++ +  + G +++
Sbjct: 488 ERPDHVTMIGVLSACSHAGLVEEGR-CYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDE 546

Query: 272 AESVFEGL-VQRNVISWTAIINGFKQHGD 299
           A ++ + + ++ + + W +++   K HG+
Sbjct: 547 ANNLIQTMPMEPDAVVWGSLLAACKVHGN 575


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/630 (33%), Positives = 354/630 (56%), Gaps = 64/630 (10%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           + +T +S+E  +  + +I+V   C   +CL+  R+    + +     + F   SL+++  
Sbjct: 41  ILMTQFSMEIFIQNR-LIDVYGKC---DCLDDARKLFDRMPQR----NTFTWNSLISVLT 92

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +     +   MP  D  S N +++G+A++  F+++  +F+K+   D   N Y++ +
Sbjct: 93  KSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGS 152

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L+ C  L  ++ G Q+HA   K +Y +   + +AL+ MY KCG +  AE VF G+++RN
Sbjct: 153 ALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERN 212

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +++W ++I  ++Q+G   + L +   M + G++P+E T    +++CASL     G   HA
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHA 272

Query: 344 QVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM---------------GKSAS-- 385
           +V+K      D V G A+VDMY+   ++ EA++    M                ++AS  
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 386 -------------SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
                         VSWNA IAG+ +N + EEA+  F  + R       +T+ ++LK   
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLK--- 389

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
                                S++ VG+SLI+ Y KCGS ED  RVF ++   D VSWN+
Sbjct: 390 ---------------------SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNA 428

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +I  Y+QNG   +A+ +F KM+V G +P + T + VL ACSH+GLV++G+  F SM +E+
Sbjct: 429 IIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEH 487

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G++P + HY+CMVDLLGRAG L  A   I  +P+ P A +W  L AAC+ H +++M +  
Sbjct: 488 GLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 547

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++++LE+DP ++  YV LSNMYAE G   D    RKLM+ + ++K+PGCSWIEV ++++ 
Sbjct: 548 AEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHV 607

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           F  ++KSH    ++Y  LK L +Q++ +G+
Sbjct: 608 FLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 637



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 195/407 (47%), Gaps = 75/407 (18%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN   ++ +L  C    +    + +HA+ +  Q+  +  + N L+ +Y KC  ++DA  +
Sbjct: 13  PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72

Query: 276 FEGLVQRNVISWTAII-------------------------------NGFKQHGDYEKPL 304
           F+ + QRN  +W ++I                               +GF QH  +E+ L
Sbjct: 73  FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
                M  +    NEY+F  AL++CA L + +MG   HA V K   +   ++G+A++DMY
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           S  G +  A++    M +  + V+WN+ I  + +N    EA+E F +M+ +    DE T 
Sbjct: 193 SKCGSVACAEEVFSGMIER-NLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERV----- 478
           +S++ AC+ L +L    QIH+R+VK+ KF  ++ +G++L++ Y KC    +A RV     
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMS 311

Query: 479 --------------------------FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
                                     FS++T  +VVSWN++I  Y+QNG   +A+ LF  
Sbjct: 312 IRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRL 371

Query: 513 MVVEGIRPTNSTFLAVLSA-----------CSHSGLVQDGQKVFESM 548
           +  E I PT+ TF  +L +               G ++DG +VFE M
Sbjct: 372 LKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKM 418



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           +VR+    +   ++ +L +C    S      +H+RI+ ++F   + + + LI+ Y KC  
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            +DA ++F ++   +  +WNS+I   +++G   +A  LF  M      P   ++ +++S 
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSG 121

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPE 557
            +     ++  + F  M +E  +L E
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNE 147


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/628 (32%), Positives = 351/628 (55%), Gaps = 12/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+  E    GR+ H  + K     D F   +LV+MYAK G ++   +V  ++   D
Sbjct: 117 MINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPD 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N ++AG   +    +A     +++   + PN +T S+ L  C  ++  + G+QLH+
Sbjct: 177 IVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHS 236

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+   S + +   L+ MY KC  M+DA  VF+ + +R++I+W A+I+G  Q+ + E+
Sbjct: 237 SLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEE 296

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L  LM  +GI  N+ T +  L S A+L+ ++M    HA  +K G    ++V  +++D
Sbjct: 297 AASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLID 356

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y   G + +A +  +E       V + + +  + ++ + EEA+  + +M       D F
Sbjct: 357 TYGKCGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H  I+K  F S++  G+SL+  Y KCGS EDA   FS++
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI 475

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               +VSW++MI   +Q+G  ++A+ LF++M+  G+ P + T ++VL AC+H+GLV + +
Sbjct: 476 PVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK 535

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F SM   +GI P + HY+CM+DLLGRAGKLE A+  ++ +P +  A +W  L  A R 
Sbjct: 536 HYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARI 595

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++ + E  ++ +L L+P+ +  +V L+N+YA  G+       R+LMK  ++ KEPG S
Sbjct: 596 HKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMS 655

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD-----------NEKEDRV 711
           W+EV +K+Y F   ++SHS   ++Y KL +L   ++  G+             +EKE  +
Sbjct: 656 WLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLL 715

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTL 739
            +HSE+LAV FGLI+ P        + L
Sbjct: 716 YHHSEKLAVAFGLIATPPGAPIRVKKNL 743



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/531 (30%), Positives = 287/531 (54%), Gaps = 4/531 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+  + L LG++ H ++  T    D+FV  SLV +YAKCG      ++   +P   
Sbjct: 16  VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRS 75

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L + Y  + +  +A S F  +    ++PN ++ S+M+ +C  L    +G+++H 
Sbjct: 76  VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL Y S    +NAL+ MY K G++EDA SVF+ + + +++SW AII G   H  + +
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L+  M + G+ PN +T + AL +CA +    +G   H+ +IK  M    F+G  ++D
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    + +A+   K M +    ++WNA I+G  +N++ EEA   F  M       ++ 
Sbjct: 256 MYSKCNSMDDARLVFKLMPER-DMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQT 314

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T S++LK+ + L +   C QIH+  +KS FE + +V +SLI+ Y KCG  EDA RVF + 
Sbjct: 315 TLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEES 374

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+V + S++ AY+Q+G+  +A+ L+ +M   GI+P +    ++L+AC+     + G+
Sbjct: 375 PIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGK 434

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           +V   ++K +G + +    + +V++  + G +E A    S +P++     W  +      
Sbjct: 435 QVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS-WSAMIGGLAQ 492

Query: 603 HSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           H   K A  + KQ+L++  P +    V++      AGL A+A+     MK+
Sbjct: 493 HGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKI 543



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 219/466 (46%), Gaps = 35/466 (7%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           + ++ N + + ++L  C     +  GKQ+H   +   + S   V+N+L+ +Y KCG   D
Sbjct: 4   LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A S+F+ +  R+V+SW A+ + +     + + + L   M   GI PNE++ +  +  C  
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L +S  G   H  +IK G     F   A+VDMY+ +G + +A     E+ K    VSWNA
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKP-DIVSWNA 182

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IAG   ++    A+E   +M ++    + FT SS LKAC+ +       Q+HS ++K  
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
             S+  +G  LI+ Y+KC S +DA  VF  +   D+++WN++I  +SQN    +A  LF 
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302

Query: 512 KMVVEGIRPTNSTFLAVLSACS-----------HSGLVQDG----QKVFESMVKEYG--- 553
            M  EGI    +T   VL + +           H+  ++ G      V  S++  YG   
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 554 ------------ILPEEAHYSCMVDLLGRAGKLEIAL---IFISNLPIKPTAPIWRPLFA 598
                        + +   ++ +V    + G+ E AL   + + +  IKP + +   L  
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422

Query: 599 ACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADA 643
           AC   S  +  + +   IL+     D     +L NMYA+ G   DA
Sbjct: 423 ACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDA 468


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/636 (34%), Positives = 346/636 (54%), Gaps = 24/636 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K F + +L  C  +      +  H  + KT    + FV + LVN+YAKCG+++    V 
Sbjct: 63  EKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVF 122

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + MP  ++ +   L+ G+ +N+    A   F ++      P+ YT S +L  C SL ++ 
Sbjct: 123 ENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLK 182

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q HA  +K      T+V +AL ++Y KCG +EDA   F  + ++NVISWT+ ++   
Sbjct: 183 LGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACG 242

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G   K LRL   M  + I PNE+T T AL+ C  + +  +G    +  IK G      
Sbjct: 243 DNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLR 302

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-----------QKTEE 404
           V  +++ +Y   G I EA +    M    S V+WNA IAG  +            Q+  E
Sbjct: 303 VRNSLLYLYLKSGFIVEAHRFFNRM-DDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSE 361

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ FS++ ++    D FT SS+L  CS + ++   EQIH++ +K+ F S+V V +SLI 
Sbjct: 362 ALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLIS 421

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            YNKCGS E A + F +++   +++W SMI  +SQ+G +++A+ +FE M + G+RP   T
Sbjct: 422 MYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVT 481

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+ VLSACSH+G+V      FE M K+Y I P   HY CMVD+  R G+LE AL FI  +
Sbjct: 482 FVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKM 541

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
             +P+  IW    A CR H +L++  + S+Q+L L P D   YV L NMY  A    D  
Sbjct: 542 NYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVS 601

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-- 702
             RK+M+++++ K    SWI + +K+Y F + +K+H     + + L+ L+ + +++G+  
Sbjct: 602 RVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEM 661

Query: 703 ----------TDNEKEDRVLYHSERLAVGFGLISLP 728
                      + +     +YHSE+LA+ FGL +LP
Sbjct: 662 LESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLP 697


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/588 (35%), Positives = 343/588 (58%), Gaps = 3/588 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V  VLS CS  E LE G++ HA + +     D  V   L++ Y KC  +K+   + 
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            QM   +I S   +++GY +N+   +A   F +++ +  +P+ +  +++L  CGS  A++
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA T+K    S   V N L+ MY K  ++ DA+ VF+ + ++NVIS+ A+I G+ 
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
                 + L L   MR     P+  TF   L   ASL    +    H  +IK G++L  F
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G+A++D+YS    + +A+   +EM +    V WNA   G+ ++ + EEA++ +S +  +
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGYTQHLENEEALKLYSTLQFS 527

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EFT+++++ A S L SL   +Q H+++VK   +    V ++L++ Y KCGS E+A
Sbjct: 528 RQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 587

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F+     DVV WNSMI  ++Q+G A +A+ +F +M+ EGI+P   TF+AVLSACSH+
Sbjct: 588 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 647

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G V+DG   F SM   +GI P   HY+C+V LLGR+GKL  A  FI  +PI+P A +WR 
Sbjct: 648 GRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 706

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR   ++++ ++ ++  +  DP D+  Y+ LSN++A  G+ AD ++ R  M   E+
Sbjct: 707 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 766

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            KEPG SWIEV NK+  F +++ +H E   +   L  L+Q I+  G+ 
Sbjct: 767 VKEPGRSWIEVNNKVNVFIARDTTHRE-ADIGSVLDILIQHIKGAGYV 813



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 233/461 (50%), Gaps = 3/461 (0%)

Query: 118 QFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +FV+  V+  C++   +E G + H  + ++    D +V  SL++ Y+K G+I+    V  
Sbjct: 129 EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 188

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           Q+      +   ++AGY K      +   F ++   +V P+ Y  S++L+ C  L  ++ 
Sbjct: 189 QLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 248

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ+HA  ++       +V N L+  Y KC  ++    +F+ +V +N+ISWT +I+G+ Q
Sbjct: 249 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 308

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +    + ++L   M   G  P+ +  T  L SC S      G   HA  IK  +   +FV
Sbjct: 309 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
              ++DMY+    + +AKK    M +  + +S+NA I G+   +K  EA+E F +M    
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRL 427

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                 T+ S+L   + L +L   +QIH  I+K     ++  GS+LI+ Y+KC   +DA 
Sbjct: 428 FPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDAR 487

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF ++   D+V WN+M   Y+Q+    +A+ L+  +     +P   TF A+++A S+  
Sbjct: 488 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 547

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            ++ GQ+    +VK  G+       + +VD+  + G +E A
Sbjct: 548 SLRHGQQFHNQLVK-MGLDFCPFVTNALVDMYAKCGSIEEA 587



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 251/519 (48%), Gaps = 12/519 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  I  + +  D F+   L+N+ +K   + +   V  +MP+ ++ + + +++ Y++    
Sbjct: 50  HGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYS 109

Query: 200 DQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           ++A   F+ L     + PN +  ++++  C  L  +++G QLH   ++  +     V  +
Sbjct: 110 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 169

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+  Y K G +E+A  VF+ L ++  ++WT II G+ + G     L L   MRE  + P+
Sbjct: 170 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 229

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            Y  +  L++C+ L     G   HA V++RG  +   V   ++D Y+    +   +K   
Sbjct: 230 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 289

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M    + +SW   I+G+ +N    EA++ F +M R     D F  +S+L +C    +L 
Sbjct: 290 QM-VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              Q+H+  +K+  ES+  V + LI+ Y K     DA++VF  +   +V+S+N+MI+ YS
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
              +  +A+ LF +M V    P+  TF+++L   S S    +  K    ++ ++G+  + 
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALELSKQIHGLIIKFGVSLDL 467

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQI 616
              S ++D+  +   ++ A      +  K    +W  +F     H  ++  +  + + Q 
Sbjct: 468 FAGSALIDVYSKCSYVKDARHVFEEMNEKDIV-VWNAMFFGYTQHLENEEALKLYSTLQF 526

Query: 617 LELDPDD---AAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
               P++   AA+    SN+   A L+   +   +L+KM
Sbjct: 527 SRQKPNEFTFAALITAASNL---ASLRHGQQFHNQLVKM 562



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 181/339 (53%), Gaps = 2/339 (0%)

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           +++P    ++ +L +  S + I   K +H Q +     S T ++N L+ +  K   +++A
Sbjct: 22  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 81

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCAS 331
             VF+ +  +N+I+W+++++ + Q G  E+ L + V L R+ G  PNE+     + +C  
Sbjct: 82  RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 141

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L     G   H  V++ G     +VGT+++D YS  G I EA+    ++ +  ++V+W  
Sbjct: 142 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK-TAVTWTT 200

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IAG+ +  ++  ++E F+QM   +   D +  SS+L ACS+L  L   +QIH+ +++  
Sbjct: 201 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 260

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            E +V V + LI+ Y KC   +   ++F Q+   +++SW +MI  Y QN    +A+ LF 
Sbjct: 261 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 320

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +M   G +P      +VL++C     ++ G++V    +K
Sbjct: 321 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIK 359



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 9/217 (4%)

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH +I+ S  +S+  + + LI   +K    ++A  VF ++   ++++W+SM+  YSQ G 
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 503 ARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           + +A+++F  +  + G  P      +V+ AC+  G+V+ G ++   +V+  G   +    
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRS-GFDQDVYVG 167

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA-CRC-HSDLKMAEFISKQILEL 619
           + ++D   + G +E A +    L  K TA  W  + A   +C  S + +  F   +   +
Sbjct: 168 TSLIDFYSKNGNIEEARLVFDQLSEK-TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNV 226

Query: 620 DPDDAAVYVTLSN----MYAEAGLQADAEEQRKLMKM 652
            PD   V   LS      + E G Q  A   R+  +M
Sbjct: 227 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/621 (33%), Positives = 343/621 (55%), Gaps = 40/621 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +LS C+    L  G+++H+   K  +  D  V  SL+++Y KC DIK+         
Sbjct: 355 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKT--------- 405

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                  +     Y +    +++F  F ++    + PN +TY ++L  C +L A D G+Q
Sbjct: 406 ------AHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQ 459

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H Q +K  +     VS+ L+ MY K G ++ A  +F  L + +V+SWTA+I G+ QH  
Sbjct: 460 IHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDK 519

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           + + L L   M++ GI  +   F  A+++CA ++    G   HAQ    G +    +G A
Sbjct: 520 FTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNA 579

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +V +Y+  G++ EA     ++  +  +VSWN+ ++GF ++   EEA+  F+QM +     
Sbjct: 580 LVSLYARCGKVREAYAAFDQI-YAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI 638

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           + FT+ S + A + + ++   +QIH  I K+ ++S   V ++LI  Y KCG+ +D     
Sbjct: 639 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD----- 693

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
                   +SWNSMI  YSQ+G   +A+ LFE M    + P + TF+ VLSACSH GLV 
Sbjct: 694 --------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVD 745

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G   F SM + + ++P+  HY+C+VDLLGR+G L  A  F+  +PI+P A +WR L +A
Sbjct: 746 EGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSA 805

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C  H ++ + EF +  +LEL+P D+A YV +SNMYA +G     +  R++MK + + KEP
Sbjct: 806 CNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEP 865

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD-----------NEKE 708
           G SW+EV N ++ FF+ +++H     +YE L+ L  +  + G+              +K+
Sbjct: 866 GRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKD 925

Query: 709 DRVLYHSERLAVGFGLISLPA 729
              + HSERLA+ FGL+SL +
Sbjct: 926 PTEIIHSERLAIAFGLLSLTS 946



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 237/454 (52%), Gaps = 19/454 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E  E G++ H L+ K     + +V  +LV +Y++ G++ S   +   M   D
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLH 241
             S N L++G A+    ++A + F K++ +D Q P+  T +++L+ C S+ A+  GKQ H
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMN-LDCQKPDCVTVASLLSACASVGALPNGKQFH 375

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           +  +K    S   V  +LL +Y+KC  ++ A   F                 + Q  +  
Sbjct: 376 SYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFL---------------CYGQLDNLN 420

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K  ++   M+ +GI PN++T+   L +C +L  + +G   H QV+K G     +V + ++
Sbjct: 421 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 480

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+  G++  A K  + + K    VSW A IAG+ ++ K  EA+  F +M       D 
Sbjct: 481 DMYAKHGKLDHALKIFRRL-KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDN 539

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
             ++S + AC+ + +L    QIH++   S +  ++ +G++L+  Y +CG   +A   F Q
Sbjct: 540 IGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQ 599

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           + A D VSWNS++  ++Q+G   +A+ +F +M   G+   + TF + +SA ++   V+ G
Sbjct: 600 IYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIG 659

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +++   M+++ G   E    + ++ L  + G ++
Sbjct: 660 KQI-HGMIRKTGYDSETEVSNALITLYAKCGTID 692



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 220/487 (45%), Gaps = 38/487 (7%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L++ Y   GD+   V V  +MP   ++  N +   +    L  +    F ++   +V+ +
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 218 HYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
              ++ +L  C G+  +    +Q+HA+T+   + S T + N L+ +Y K G +  A+ VF
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           E L  R+ +SW A+I+G  Q+G  E+ + L C               + L++C  +    
Sbjct: 223 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFC--------------QIVLSACTKVEFFE 268

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H  V+K+G +   +V  A+V +YS  G +  A++    M +    VS+N+ I+G 
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQR-DRVSYNSLISGL 327

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +      A+  F +M  +    D  T +S+L AC+ + +L   +Q HS  +K+   S++
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V  SL++ Y KC               +D+ + +     Y Q     K+  +F +M +E
Sbjct: 388 VVEGSLLDLYVKC---------------SDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIE 432

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           GI P   T+ ++L  C+  G    G+++   ++K  G        S ++D+  + GKL+ 
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDH 491

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMY 634
           AL     L        W  + A    H     A  + K++ +  +  D+      +S   
Sbjct: 492 ALKIFRRLKENDVVS-WTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAIS--- 547

Query: 635 AEAGLQA 641
           A AG+QA
Sbjct: 548 ACAGIQA 554



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 36/270 (13%)

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           LM + G+  N  TF   L  C + R+                    + G  ++D Y   G
Sbjct: 71  LMEQHGVRANSQTFLWLLEGCLNSRSF-------------------YDGLKLIDFYLAFG 111

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A     EM   + S  WN     F   +        F +M+  +   DE  ++ +L
Sbjct: 112 DLNCAVNVFDEMPIRSLSC-WNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVL 170

Query: 429 KACSL-LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + CS    S    EQIH++ + S FES+  + + LI+ Y K G    A++VF  L A D 
Sbjct: 171 RGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDS 230

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSW +MI   SQNG   +A++LF ++              VLSAC+     + G+++   
Sbjct: 231 VSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQL-HG 275

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +V + G   E    + +V L  R+G L  A
Sbjct: 276 LVLKQGFSSETYVCNALVTLYSRSGNLSSA 305


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/569 (36%), Positives = 324/569 (56%), Gaps = 3/569 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ HAL  KTA   D F  +SL+NMY K G +     +  +MP  +  S   +++GYA 
Sbjct: 135 GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYAS 194

Query: 196 NALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             L D+AF  F  ++ +      N + ++++L+       ++ G+Q+H+  MK   +   
Sbjct: 195 QELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIV 254

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           +V+NAL+TMY+KCG +EDA   FE    +N I+W+A++ GF Q GD +K L+L   M + 
Sbjct: 255 SVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  P+E+T    + +C+       G   H   +K G  L  +V +A+VDMY+  G I +A
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDA 374

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +K   E  +    V W + I G+ +N   E A+  + +M       ++ T +S+LKACS 
Sbjct: 375 RKGF-ECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSN 433

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L +L   +Q+H+ I+K  F   + +GS+L   Y KCGS +D  R+F ++ A DV+SWN+M
Sbjct: 434 LAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAM 493

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I   SQNGR  + + LFEKM +EG +P N TF+ +LSACSH GLV  G   F+ M  E+ 
Sbjct: 494 ISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFN 553

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P   HY+CMVD+L RAGKL  A  FI +  +     +WR L AA + H D  +  +  
Sbjct: 554 IAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAG 613

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           ++++EL   +++ YV LS++Y   G   D E  R +MK + ++KEPGCSWIE+ +  + F
Sbjct: 614 EKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVF 673

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
              +  H ++ ++   LK L + ++D G+
Sbjct: 674 VVGDNMHPQIDEIRLGLKLLTKLMKDEGY 702



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 253/533 (47%), Gaps = 21/533 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V+  L +C+R + L  GR  HA I  T       +  SL+N+YAKC        V   + 
Sbjct: 13  VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN 72

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-----LKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             D+ S NCL+  +++      +         L +    + PN +T + +     +LS  
Sbjct: 73  NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDS 132

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+Q HA  +K         +++LL MY K G++ +A  +F+ + +RN +SW  +I+G+
Sbjct: 133 RAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGY 192

Query: 295 KQHGDYEKPLRLVCLMR--EDGIDPNEYTFTVALA--SCASLRNSHMGYMFHAQVIKRGM 350
                 ++   L  LMR  E G + NE+ FT  L+  +C  L N+  G   H+  +K G+
Sbjct: 193 ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNT--GRQVHSLAMKNGL 250

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                V  A+V MY   G + +A K   E+  + +S++W+A + GF +   +++A++ F 
Sbjct: 251 VCIVSVANALVTMYVKCGSLEDALKTF-ELSGNKNSITWSAMVTGFAQFGDSDKALKLFY 309

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M ++     EFT   ++ ACS   ++    Q+H   +K  +E  ++V S+L++ Y KCG
Sbjct: 310 DMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCG 369

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S  DA + F  +   DVV W S+I  Y QNG    A+ L+ KM + G+ P + T  +VL 
Sbjct: 370 SIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLK 429

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACS+   +  G+++   ++K Y    E    S +  +  + G L+        +P +   
Sbjct: 430 ACSNLAALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVI 488

Query: 591 PIWRPLFAAC----RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
             W  + +      R +  L++ E   K  LE    D   +V L +  +  GL
Sbjct: 489 S-WNAMISGLSQNGRGNEGLELFE---KMCLEGTKPDNVTFVNLLSACSHMGL 537



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 116 DKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           + +FV   VLS  +    +  GR+ H+L  K  +     V  +LV MY KCG ++  +  
Sbjct: 217 ENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKT 276

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +     +  + + ++ G+A+    D+A   F  +      P+ +T   ++  C    AI
Sbjct: 277 FELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAI 336

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EG+Q+H  ++KL Y  +  V +AL+ MY KCG + DA   FE + Q +V+ WT+II G+
Sbjct: 337 VEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGY 396

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+GDYE  L L   M+  G+ PN+ T    L +C++L     G   HA +IK   +L  
Sbjct: 397 VQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEI 456

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +G+A+  MY+  G + +  +    M  +   +SWNA I+G  +N +  E +E F +M  
Sbjct: 457 PIGSALSAMYAKCGSLDDGYRIFWRM-PARDVISWNAMISGLSQNGRGNEGLELFEKMCL 515

Query: 415 NDAACDEFTYSSILKACS 432
                D  T+ ++L ACS
Sbjct: 516 EGTKPDNVTFVNLLSACS 533


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/628 (31%), Positives = 341/628 (54%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L+ G+  H  +   +   + F    +VNMYAKC  I     +  +MP  D
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERD 212

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++AG+++N    +A    L++     +P+  T  T+L     +  +  GK +H 
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  +     +S AL  MY KCG +E A  +F+G+ Q+ V+SW ++++G+ Q+G+ EK
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M E+GIDP   T   AL +CA L +   G   H  V +  +     V  +++ 
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    +  A      +    + VSWNA I G+ +N +  EA+  FS+M       D F
Sbjct: 393 MYSKCKRVDIASDIFNNL-NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSF 451

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S++ A + L      + IH  I++S  + N+ V ++L++ Y+KCG+   A ++F  +
Sbjct: 452 TMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMI 511

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +   V++WN+MI  Y  +G  R A+ LF+KM    + P + T+L+V+SACSHSGLV +G 
Sbjct: 512 SDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGL 571

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F+SM ++YG+ P   HY  MVDLLGRAG+++ A  FI N+PI P   ++     AC+ 
Sbjct: 572 RHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKI 631

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  +K++ EL+PD+   +V L+N+YA     +   E RK M+ K + K PGCS
Sbjct: 632 HKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCS 691

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ F+S + +H +  ++Y  L++L+ +I+  G+           D+ +E  + 
Sbjct: 692 VVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLILDVEDDVQEQLLN 751

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ FGL++          + L 
Sbjct: 752 SHSEKLAIAFGLLNTSPGTTIHVRKNLR 779



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 222/439 (50%), Gaps = 8/439 (1%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
           L+ K  +  +      LV++++K G I     V + +     A  + +L GYAKN+  + 
Sbjct: 71  LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A +F  ++   DV+P  Y ++ +L +CG  + +  GK++H Q +   + +       ++ 
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KC  ++DA  +F+ + +R+++SW  II GF Q+G  +K L LV  M+++G  P+  T
Sbjct: 191 MYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT 250

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L + A +    +G   H   I+ G A    + TA+ DMYS  G +  A+     M 
Sbjct: 251 LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMD 310

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           +  + VSWN+ + G+ +N + E+AI  F +M+         T    L AC+ L  L   +
Sbjct: 311 QK-TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            +H  + +    S++ V +SLI  Y+KC   + A  +F+ L     VSWN+MI  Y+QNG
Sbjct: 370 FVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNG 429

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPEE 558
           R  +A+  F +M   G++P + T ++V+ A +   + +  + +   +++   +  I    
Sbjct: 430 RVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT 489

Query: 559 AHYSCMVDLLGRAGKLEIA 577
           A    +VD+  + G + +A
Sbjct: 490 A----LVDMYSKCGAIHMA 504



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 216 PNH---YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           P+H   +  + +L +C S+    E  Q+    +K    ++      L++++ K G + +A
Sbjct: 44  PSHVYKHPAAVLLELCTSMK---ELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEA 100

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VFE +  +    +  ++ G+ ++   E  L  +C MR D + P  Y FT  L  C   
Sbjct: 101 ARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDN 160

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H Q+I    A   F  T +V+MY+   +I +A K    M +    VSWN  
Sbjct: 161 ADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER-DLVSWNTI 219

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAGF +N   ++A+E   +M       D  T  ++L A + +  L   + IH   +++ F
Sbjct: 220 IAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGF 279

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
              V++ ++L + Y+KCGS E A  +F  +    VVSWNSM+  Y QNG   KAI +FEK
Sbjct: 280 AKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEK 339

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+ EGI PT  T +  L AC+  G ++ G K     V +  +  + +  + ++ +  +  
Sbjct: 340 MLEEGIDPTGVTIMEALHACADLGDLERG-KFVHKFVDQLNLGSDISVMNSLISMYSKCK 398

Query: 573 KLEIALIFISNL 584
           +++IA    +NL
Sbjct: 399 RVDIASDIFNNL 410



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 226/520 (43%), Gaps = 63/520 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F++ P+R  +S + +I          G S+NG++ +         D+G        
Sbjct: 201 AYKMFDRMPERDLVSWNTII---------AGFSQNGFAKKALELVLRMQDEG-------- 243

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   ++ VL   +    L +G+  H    +        ++ +L +MY+KCG 
Sbjct: 244 -----QRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTML 225
           +++   +   M    + S N ++ GY +N   ++A + F K+  +GID  P   T    L
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID--PTGVTIMEAL 356

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  ++ GK +H    +L   S  +V N+L++MY KC  ++ A  +F  L  R  +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G+ Q+G   + L     M+  G+ P+ +T    + + A L  +      H  +
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+  +    FV TA+VDMYS  G I  A+K L +M      ++WNA I G+  +     A
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARK-LFDMISDRHVITWNAMIDGYGTHGLGRAA 535

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F +M +     ++ TY S++ ACS           HS +V    +  +    S+ + 
Sbjct: 536 LDLFDKMKKGAVEPNDITYLSVISACS-----------HSGLV----DEGLRHFKSMKQD 580

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y    S +                + +M+    + GR ++A    E M    I P  + +
Sbjct: 581 YGLEPSMD---------------HYGAMVDLLGRAGRIKEAWDFIENM---PISPGITVY 622

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
            A   AC     ++ G+K  +   K + + P+E  Y  ++
Sbjct: 623 GAXXGACKIHKNIEVGEKAAK---KLFELNPDEGGYHVLL 659


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/580 (33%), Positives = 332/580 (57%), Gaps = 1/580 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+   CL   R+ HA   K     D+ V  ++V++YAK   +         +P   
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +CN ++ G  +  L  +A   F  +    +  +  + S + + C  +    +G Q+H 
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHC 362

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +     V NA+L +Y KC  + +A  VF+ + QR+ +SW AII   +Q+  YE 
Sbjct: 363 LAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYED 422

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +  +  M   G++P+++T+   L +CA L++   G + H + IK G+ L  FV + +VD
Sbjct: 423 TIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVD 482

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G I EA+K    +G     VSWN+ I+GF  N+++EEA + FS+M+      D F
Sbjct: 483 MYCKCGMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY+++L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG+  D+  +F + 
Sbjct: 542 TYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA 601

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN+MI  Y+ +G+  +A+ +FE+M    + P ++TF+AVL ACSH GL+ DG 
Sbjct: 602 QKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGC 661

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  M   Y + P+  H++CMVD+LGR+   + AL FI ++P++  A IW+ L + C+ 
Sbjct: 662 RYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKI 721

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             D+++AE  +  +L LDPDD++VY+ LSN+YAE+G   D    R+LM+   + KEPGCS
Sbjct: 722 RQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCS 781

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           WIEV ++++ F + +K H    +VYE L  L+ +++  G+
Sbjct: 782 WIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGY 821



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 237/465 (50%), Gaps = 2/465 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +L  C   E L LG + HA+  KT +  D    ++LV+MY KC  ++  +   
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   +  S    +AG  +N  + +    F+++  + +  +   Y+++   C +++ + 
Sbjct: 195 HGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLS 254

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             +QLHA  +K ++ +   V  A++ +Y K   + DA   F  L    V +  A++ G  
Sbjct: 255 TARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLV 314

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   + L+L   M   GI  +  + +   ++CA ++    G   H   IK G  +   
Sbjct: 315 RTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC 374

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  AI+D+Y     + EA    +EM +   SVSWNA IA   +N+  E+ I   ++M+R 
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRY 433

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+FTY S+LKAC+ L SL     +H + +KS    +  V S++++ Y KCG   +A
Sbjct: 434 GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 493

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +++  ++   ++VSWNS+I  +S N ++ +A   F +M+  G++P + T+  VL  C++ 
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
             ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+ 
Sbjct: 554 ATIELGKQIHGQIIKQE-MLGDEYISSTLVDMYAKCGNMPDSLLM 597



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/571 (25%), Positives = 259/571 (45%), Gaps = 46/571 (8%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  YA  GD  +  ++   MP  D+ S N LL+GY +  +F  +    +++    V P
Sbjct: 75  TMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAP 134

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T + +L  CG L  +  G Q+HA  +K          +AL+ MY KC  +EDA   F
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A I G  Q+  Y + L L   M+  G+  ++  +     SCA++    
Sbjct: 195 HGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLS 254

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                HA  IK   +    VGTAIVD+Y+    + +A++    +  + +  + NA + G 
Sbjct: 255 TARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL-PNHTVQACNAMMVGL 313

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R     EA++ F  M R+    D  + S +  AC+ +       Q+H   +KS F+ +V
Sbjct: 314 VRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDV 373

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +++++ Y KC +  +A  VF ++   D VSWN++I A  QN      I    +M+  
Sbjct: 374 CVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRY 433

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-- 574
           G+ P + T+ +VL AC+    ++ G  V    +K  G+  +    S +VD+  + G +  
Sbjct: 434 GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKS-GLGLDAFVSSTVVDMYCKCGMITE 492

Query: 575 -----------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
                                        E A  F S   ++ +KP    +  +   C  
Sbjct: 493 AQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCAN 552

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +++ + I  QI++ +   D  +  TL +MYA+ G   D+     L+  ++  K    
Sbjct: 553 LATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDS-----LLMFEKAQKLDFV 607

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           SW    N +   ++ +    E  +++E+++Q
Sbjct: 608 SW----NAMICGYALHGQGFEALEMFERMQQ 634



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 232/541 (42%), Gaps = 83/541 (15%)

Query: 220 TYSTMLAICGSL--SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           T+S +  +C     SA+  G+  HA+ +   ++  T VSN LL MY +CG    A  VF+
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 278 GLVQRN-------------------------------VISWTAIINGFKQHGDYEKPLRL 306
            +  R+                               V+SW A+++G+ Q G +   + L
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+ P+  T  V L +C  L +  +G   HA  +K G+ +    G+A+VDMY  
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              + +A +    MG+  +SVSW A IAG  +N++    +E F QM R      +  Y+S
Sbjct: 184 CRSLEDALRFFHGMGER-NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYAS 242

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           + ++C+ +  L+T  Q+H+  +K+KF ++  VG+++++ Y K  S  DA R F  L    
Sbjct: 243 VFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHT 302

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V + N+M+    + G   +A+ LF+ M   GI     +   V SAC+       G +V  
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHC 362

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC---RCH 603
             +K  G   +    + ++DL G+   L  A +    +  + +   W  + AA     C+
Sbjct: 363 LAIKS-GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS-WNAIIAALEQNECY 420

Query: 604 SDLKMAEFISKQILELDPD----------------------------------DAAVYVT 629
            D  +A         ++PD                                  DA V  T
Sbjct: 421 ED-TIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           + +MY + G+  +A++    +  +E+      SW    N I   FS NK   E  K + +
Sbjct: 480 VVDMYCKCGMITEAQKLHDRIGGQEL-----VSW----NSIISGFSLNKQSEEAQKFFSE 530

Query: 690 L 690
           +
Sbjct: 531 M 531


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/588 (35%), Positives = 338/588 (57%), Gaps = 5/588 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  VLS CS    LE G++ HA I +  +  D  +   L++ Y KCG + +   + 
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +I S   LL+GY +NAL  +A   F  +    ++P+ Y  S++L  C SL A+ 
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q+HA T+K    + + V+N+L+ MY KC  + DA  VF+     +V+ + A+I G+ 
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427

Query: 296 QHG---DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           + G   +  + L +   MR   I P+  TF   L + ASL +  +    H  + K G+ L
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F G+A++D+YS    + +++    EM K    V WN+  AG+ +  + EEA+  F ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             +    DEFT+++++ A   L S+   ++ H +++K   E N ++ ++L++ Y KCGS 
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA + F    + DVV WNS+I +Y+ +G  +KA+ + EKM+ EGI P   TF+ VLSAC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GLV+DG K FE M++ +GI PE  HY CMV LLGRAG+L  A   I  +P KP A +
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           WR L + C    ++++AE  ++  +  DP D+  +  LSN+YA  G+  +A++ R+ MK+
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
           + + KEPG SWI +  +++ F S++KSH +  ++YE L  L+ QI  +
Sbjct: 786 EGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 248/515 (48%), Gaps = 7/515 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
            + + K+    D +V   L++ Y K G+I     V   +P     +   +++G  K    
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             +   F +L   +V P+ Y  ST+L+ C  L  ++ GKQ+HA  ++       ++ N L
Sbjct: 231 YVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVL 290

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +  Y+KCG +  A  +F G+  +N+ISWT +++G+KQ+  +++ + L   M + G+ P+ 
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           Y  +  L SCASL     G   HA  IK  +    +V  +++DMY+    + +A+K   +
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-D 409

Query: 380 MGKSASSVSWNAQIAGFFR---NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           +  +A  V +NA I G+ R     +  EA+  F  M          T+ S+L+A + L S
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +QIH  + K     ++  GS+LI+ Y+ C   +D+  VF ++   D+V WNSM   
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y Q     +A+ LF ++ +   RP   TF  +++A  +   VQ GQ+ F   + + G+  
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLEC 588

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
                + ++D+  + G  E A     +   +     W  + ++   H + K A + + K 
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV-CWNSVISSYANHGEGKKALQMLEKM 647

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           + E    +   +V + +  + AGL  D  +Q +LM
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 249/509 (48%), Gaps = 19/509 (3%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  I    +  D +++  L+N+Y++ G +     V ++MP  ++ S + +++    + ++
Sbjct: 67  HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126

Query: 200 DQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK----QLHAQTMKLQYLSKTA 254
           +++   FL+        PN Y  S+ +  C  L     G+    QL +  +K  +     
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVY 184

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V   L+  Y+K G ++ A  VF+ L +++ ++WT +I+G  + G     L+L   + ED 
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+ Y  +  L++C+ L     G   HA +++ G+ +   +   ++D Y   G +  A 
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K    M  + + +SW   ++G+ +N   +EA+E F+ M +     D +  SSIL +C+ L
Sbjct: 305 KLFNGM-PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L    Q+H+  +K+   ++ +V +SLI+ Y KC    DA +VF    AADVV +N+MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423

Query: 495 KAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           + YS+ G      +A+ +F  M    IRP+  TF+++L A +    +   +++   M K 
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK- 482

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-- 609
           YG+  +    S ++D+      L+ + +    + +K    IW  +FA     S+ + A  
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFAGYVQQSENEEALN 541

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAG 638
            F+  Q+    PD+     T +NM   AG
Sbjct: 542 LFLELQLSRERPDE----FTFANMVTAAG 566



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 165/314 (52%), Gaps = 4/314 (1%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H Q +       T +SN L+ +Y + G M  A  VFE + +RN++SW+ +++    HG 
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 300 YEKPLRLVC-LMREDGIDPNEYTFTVALASCASL--RNSHMGYMFHAQVIKRGMALGDFV 356
           YE+ L +     R     PNEY  +  + +C+ L  R   M +   + ++K G     +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GT ++D Y   G I  A+     + +  S+V+W   I+G  +  ++  +++ F Q++ ++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D +  S++L ACS+LP L   +QIH+ I++   E +  + + LI++Y KCG    A 
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F+ +   +++SW +++  Y QN   ++A+ LF  M   G++P      ++L++C+   
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364

Query: 537 LVQDGQKVFESMVK 550
            +  G +V    +K
Sbjct: 365 ALGFGTQVHAYTIK 378


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/578 (35%), Positives = 336/578 (58%), Gaps = 13/578 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+      LG + H    KT    D  V  + ++MYAKC ++     +   +P  +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI------DE 236
           + S N ++ GYA+N    QAF  FL+L     Q N +++   +++ G+LSA        E
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQL-----QKNSFSFDE-VSLSGALSAAAVIKGHSE 377

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G QLH   +K    S   V+NA+L MY KCG + +A  +F+ +  R+ +SW AII   +Q
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQ 437

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +    K L     M    ++P+E+T+   L +CA  R    G   H ++IK GM L  FV
Sbjct: 438 NESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFV 497

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G+A+VDMYS  G + EA+K    + +  + VSWNA I+GF   +K+E++   FS M+   
Sbjct: 498 GSALVDMYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMG 556

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D FTY+++L  C+ L ++   +QIH++++K +  S+V++ S+L++ Y+KCG+  D+ 
Sbjct: 557 VEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSL 616

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F +    D V+WN+MI  ++ +G   +A+ LFE M+ E I+P ++TF++VL ACSH G
Sbjct: 617 LMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVG 676

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
             + G   F+ M   Y + P+  HYSCMVD+LGR+G++E AL  I ++P +  A IWR L
Sbjct: 677 NAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTL 736

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            + C+   ++++AE  +  +L+LDP+D++ Y  LSN+YA+AG+     + R+ M+   + 
Sbjct: 737 LSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLK 796

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           KEPGCSWIEV ++++ F   +K+H +   +Y  L  L+
Sbjct: 797 KEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLI 834



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 270/566 (47%), Gaps = 13/566 (2%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFN----GYMNIEE---KGISRNGYSTRNDSFPDGFIDDG- 99
           A ++F + P+R  +S + ++F     G M + +     +  +G     +S   G++ +G 
Sbjct: 78  AYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGD 137

Query: 100 --CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
              S  V +    L  + D   +   L  CS  E   LG + H +  +     D    ++
Sbjct: 138 IQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSA 197

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           LV+MYAKC  ++  + V  ++P  +  S +  +AG  +N    +    F ++    +  +
Sbjct: 198 LVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVS 257

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             TY+++   C  LSA   G QLH   +K  + S   V  A L MY KC  M DA  +F 
Sbjct: 258 QSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFS 317

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L   N+ S+ A+I G+ ++    +  +L   ++++    +E + + AL++ A ++    
Sbjct: 318 LLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H   IK  ++    V  AI+DMY   G + EA     EM +    VSWNA I    
Sbjct: 378 GLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM-EIRDPVSWNAIITACE 436

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N+   + +  F  M+R+    DEFTY S+LKAC+   + +   ++H RI+KS     + 
Sbjct: 437 QNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMF 496

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VGS+L++ Y+KCG  E+AE++  +L    +VSWN++I  +S   ++  +   F  M+  G
Sbjct: 497 VGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMG 556

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           + P N T+  VL  C++   V  G+++   M+K   +L +    S +VD+  + G +  +
Sbjct: 557 VEPDNFTYATVLDTCANLATVGLGKQIHAQMIK-LELLSDVYITSTLVDMYSKCGNMHDS 615

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCH 603
           L+     P K  +  W  +      H
Sbjct: 616 LLMFRKAP-KRDSVTWNAMICGFAYH 640



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 230/488 (47%), Gaps = 34/488 (6%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-- 179
            +   CS    L+ G+  HA +  +      FVT  L+ MY KC  ++    V ++MP  
Sbjct: 29  HIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQR 88

Query: 180 ------------------------------YLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
                                         + D+ S N L++GY +N    ++ + FLK+
Sbjct: 89  DIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKM 148

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
             + V  +H T +  L IC  L     G Q+H   +++ +       +AL+ MY KC  +
Sbjct: 149 RDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSL 208

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           ED+  VF  L  +N ISW+A I G  Q+    + L+L   M+  GI  ++ T+     SC
Sbjct: 209 EDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC 268

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A L  S +G   H   +K        VGTA +DMY+    + +A K L  +    +  S+
Sbjct: 269 AGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYK-LFSLLPDHNLQSY 327

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA I G+ RN++  +A + F Q+ +N  + DE + S  L A +++   +   Q+H   +K
Sbjct: 328 NAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIK 387

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S   SN+ V +++++ Y KCG+  +A  +F ++   D VSWN++I A  QN    K +  
Sbjct: 388 SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSH 447

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F  M+   + P   T+ +VL AC+      +G +V   ++K  G+  +    S +VD+  
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKS-GMGLKMFVGSALVDMYS 506

Query: 570 RAGKLEIA 577
           + G +E A
Sbjct: 507 KCGMMEEA 514



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 47/419 (11%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+S +   C +  A+  GK+ HA  +   +     V+N L+ MY+KC  +E A  VFE +
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 280 VQR--------------------------------NVISWTAIINGFKQHGDYEKPLRLV 307
            QR                                +V+SW ++I+G+ Q+GD +K + + 
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             MR+ G+  +  T  V+L  C+ L +  +G   H   ++ G       G+A+VDMY+  
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
             + ++     E+    + +SW+A IAG  +N +    ++ F +M R      + TY+S+
Sbjct: 206 NSLEDSLDVFSEL-PDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            ++C+ L +     Q+H   +K+ F S+V VG++ ++ Y KC +  DA ++FS L   ++
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS----HS-GLVQDGQ 542
            S+N+MI  Y++N +  +A  LF ++          +    LSA +    HS GL   G 
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPLFAAC 600
            +  ++     +       + ++D+ G+ G L  A      + I+   P+ W  +  AC
Sbjct: 385 AIKSNLSSNICVA------NAILDMYGKCGALVEASGLFDEMEIRD--PVSWNAIITAC 435


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/633 (34%), Positives = 339/633 (53%), Gaps = 26/633 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     L   R  H  + KT    D FV  SLVN Y +CG  +   ++  QMP 
Sbjct: 82  VPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPE 141

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   L+ GY  N+   +A   F+++      P+HYT   ML  C + +  D G Q+
Sbjct: 142 KNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQV 201

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  T+K + LS T++ N+L  MY K G +E A   F  +  +NVI+WT +I+   +  +Y
Sbjct: 202 HGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENY 261

Query: 301 -EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  L L   M  DG+ PNE+T T  ++ C +  + ++G    A   K G      V  +
Sbjct: 262 TELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNS 321

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-----------EAIEA 408
            + +Y   GE  EA +  +EM    S ++WNA I+G+ +  +T            +A++ 
Sbjct: 322 TMYLYLRKGETDEAMRFFEEM-DDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKV 380

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  + R+    D FT+SSIL  CS + +L   EQIH++ +K+ F S+V V S+L+  YNK
Sbjct: 381 FRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  EDA + F +++   +V+W SMI  YSQ+GR ++AI LFE M   G+RP   TF+ V
Sbjct: 441 CGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCV 500

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACS++GL +  +  F+ M +EY I P   HY CMVD+  R G+L+ A  FI     +P
Sbjct: 501 LSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEP 560

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L A CR H ++++A + + +++EL P     YV L NMY       D    RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRK 620

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH------ 702
           LMK + +      SWI + +K+Y F + +K+H    ++Y+ L+ L+++ + IG+      
Sbjct: 621 LMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSA 680

Query: 703 --TDNEKEDR-----VLYHSERLAVGFGLISLP 728
             +D+E + +     V +HSERLAV  GL+  P
Sbjct: 681 ELSDSEDDKKPPAGSVRHHSERLAVALGLLQTP 713



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 225/473 (47%), Gaps = 27/473 (5%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L +C    ++   + LH   +K    +   V+ +L+  Y++CG  +DA S+F+ + 
Sbjct: 81  YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           ++NV++WTA+I G+  +    + L +   M E G  P+ YT    L +C++  N+ +G  
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQ 200

Query: 341 FHAQVIK-RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
            H   IK R +++   +G ++  MY+  G +  A +  + M    + ++W   I+    +
Sbjct: 201 VHGYTIKYRALSITS-IGNSLCRMYAKSGSLESAMRAFR-MVPDKNVITWTTMISACAED 258

Query: 400 QK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           +  TE  +  F  M+ +    +EFT +S++  C     L   +Q+ +   K   ++N+ V
Sbjct: 259 ENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPV 318

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ---------NGRAR--KAI 507
            +S +  Y + G  ++A R F ++    +++WN+MI  Y+Q         + R+R  +A+
Sbjct: 319 KNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQAL 378

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            +F  +    ++P   TF ++LS CS    ++ G+++    +K  G L +    S +V++
Sbjct: 379 KVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKT-GFLSDVVVNSALVNM 437

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILELDPDDAA 625
             + G +E A      + I+ T   W  + +    H   + A   F   +   + P++  
Sbjct: 438 YNKCGCIEDATKAFVEMSIR-TLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEIT 496

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIYRF 673
               LS   + AGL   AE    +MK +E   EP     GC  ++++ ++ R 
Sbjct: 497 FVCVLSAC-SYAGLAEKAEHYFDMMK-EEYKIEPIVDHYGC-MVDMFVRLGRL 546



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 128/269 (47%), Gaps = 15/269 (5%)

Query: 383 SASSVSWNAQIAGFFRNQKTEEA------IEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           +A   +WN +     +N  T EA      +     M+R         Y  +L  C    S
Sbjct: 34  AADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGS 93

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L     +H  +VK+   +++ V +SL+ AY +CG+ +DA  +F Q+   +VV+W ++I  
Sbjct: 94  LGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITG 153

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+ N +  +A+ +F +M+  G  P++ T  A+L+ACS S     G +V    +K Y  L 
Sbjct: 154 YTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIK-YRALS 212

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC---RCHSDLKMAEFIS 613
             +  + +  +  ++G LE A+     +P K     W  + +AC     +++L +  F+ 
Sbjct: 213 ITSIGNSLCRMYAKSGSLESAMRAFRMVPDK-NVITWTTMISACAEDENYTELGLTLFLD 271

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQAD 642
             +  + P++     TL+++ +  G + D
Sbjct: 272 MLMDGVLPNE----FTLTSVMSLCGTRLD 296


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 342/619 (55%), Gaps = 11/619 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE G+  H    +  +  D  V   L+ MYAKCG+ +    +   +   D+ + + ++A 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             +    ++A S F ++    ++PN  T  ++L  C  LS +  GK +H  T+K    S 
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
            +   AL++MY KCG    A + F  +  R++++W ++ING+ Q GD    + +   +R 
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             I+P+  T    + +CA L +   G   H  ++K G      V  A++DMY+  G +  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +   +   V+WN  IA + +N   +EAI +F QM   +   +  T+ S+L A +
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +       H+ I++  F SN  VG+SLI+ Y KCG  + +E++F+++   D VSWN+
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNA 704

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           M+  Y+ +G   +AI LF  M    ++  + +F++VLSAC H+GLV++G+K+F SM  +Y
Sbjct: 705 MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKY 764

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            I P+  HY+CMVDLLGRAG  +  L FI  +P++P A +W  L  +CR HS++K+ E  
Sbjct: 765 HIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVA 824

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
              +++L+P + A +V LS++YA++G  ADA + R  M    + K PGCSW+E+ NK++ 
Sbjct: 825 LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--------EKEDRVLY---HSERLAVG 721
           F   +KSH ++  ++     L++++E IG+  +        E+ED+ ++   HSERLA+ 
Sbjct: 885 FRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 944

Query: 722 FGLISLPAKNKFECSRTLE 740
           F L++ P  +  +  + L 
Sbjct: 945 FALLNTPPGSTIQIVKNLR 963



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 253/520 (48%), Gaps = 12/520 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +EL R  H  + +        V+  L+++Y+KCGD+     V  QM   D  S   ++AG
Sbjct: 246 IELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N  F +    F K+   +V+ N  +  +          +++GK++H   ++ +  S 
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+  L+ MY KCG  E A+ +F GL  R++++W+AII    Q G  E+ L L   M+ 
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             + PN  T    L +CA L    +G   H   +K  M      GTA+V MY+  G    
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A      M  S   V+WN+ I G+ +      AI+ F ++  +    D  T   ++ AC+
Sbjct: 484 ALTTFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWN 491
           LL  L     IH  IVK  FES+ HV ++LI+ Y KCGS   AE +F++     D V+WN
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I AY QNG A++AI  F +M +E   P + TF++VL A ++    ++G   F + + +
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQ 661

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMA 609
            G L      + ++D+  + G+L+ +    + +  K T   W  + +  A   H D  +A
Sbjct: 662 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRAIA 720

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            F   Q  ++  D  + +V++ +    AGL    EE RK+
Sbjct: 721 LFSLMQESQVQIDSVS-FVSVLSACRHAGL---VEEGRKI 756



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 263/571 (46%), Gaps = 7/571 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     VL  C+    L+ G  +H  I +  +  D F+ A LV+MY+K GD+K    V 
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  D+ + N ++AG +++    +A  FF  +  + V+P+  +   +      LS I+
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             + +H    +  +   +AVSN L+ +Y KCG ++ A  VF+ +V ++ +SW  ++ G+ 
Sbjct: 248 LCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYA 305

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G + + L L   M+   +  N+ +   A  + A   +   G   H   +++ +     
Sbjct: 306 HNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V T ++ MY+  GE  E  KQL    +    V+W+A IA   +    EEA+  F +M   
Sbjct: 366 VATPLMVMYAKCGET-EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T  SIL AC+ L  L   + IH   VK+  +S++  G++L+  Y KCG +  A
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
              F+++++ D+V+WNS+I  Y+Q G    AI +F K+ +  I P   T + V+ AC+  
Sbjct: 485 LTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G  +   +VK  G   +    + ++D+  + G L  A    +          W  
Sbjct: 545 NDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603

Query: 596 LFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           + AA     H+   ++ F   ++    P+       L      A  +        +++M 
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663

Query: 654 EISKE-PGCSWIEVYNKIYRFFSQNKSHSEM 683
            +S    G S I++Y K  +     K  +EM
Sbjct: 664 FLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM 694



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 198/433 (45%), Gaps = 7/433 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+    L+LG+  H    K  +  D     +LV+MYAKCG   + +    +M 
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI + N L+ GYA+      A   F KL    + P+  T   ++  C  L+ +D+G  
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
           +H   +KL + S   V NAL+ MY KCG +  AE +F      ++ ++W  II  + Q+G
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ +     MR +   PN  TF   L + A L     G  FHA +I+ G      VG 
Sbjct: 613 HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGN 672

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G++  ++K   EM     +VSWNA ++G+  +   + AI  FS M  +   
Sbjct: 673 SLIDMYAKCGQLDYSEKLFNEMDHK-DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 419 CDEFTYSSILKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
            D  ++ S+L AC     +    +I HS   K   + ++   + +++   + G +++   
Sbjct: 732 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 478 VFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHS 535
               +    D   W +++ +   +   +   +  + +V   + P N     VLS+  + S
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV--KLEPRNPAHFVVLSSIYAQS 849

Query: 536 GLVQDGQKVFESM 548
           G   D  K    M
Sbjct: 850 GRWADAGKARSKM 862



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 218/475 (45%), Gaps = 45/475 (9%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA--LLTMYIKCGMMEDAES 274
           N+  Y  +L+ C  L+ +    Q+HAQ +   +    ++++   L +++ KC +   A S
Sbjct: 31  NYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARS 84

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+     + I W ++I  + +   Y + L +   M E G++P++YTFT  L +C    N
Sbjct: 85  VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALN 144

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G  FH ++ +RG+    F+G  +VDMYS +G++  A++   +M K    V+WNA IA
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR-DVVAWNAMIA 203

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G  +++   EA++ F  M          +  ++      L ++  C  IH  + +  F S
Sbjct: 204 GLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS 263

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            V  G  LI+ Y+KCG  + A RVF Q+   D VSW +M+  Y+ NG   + + LF+KM 
Sbjct: 264 AVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE----------------------- 551
           +  +R    + ++   A + +  ++ G+++    +++                       
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381

Query: 552 ------YGILPEE-AHYSCMVDLLGRAGKLEIALIF---ISNLPIKPTAPIWRPLFAACR 601
                 +G+   +   +S ++  L + G  E AL     + N  +KP       +  AC 
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441

Query: 602 CHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
             S LK+ + I    ++ D D D +    L +MYA+ G    A      M  ++I
Sbjct: 442 DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDI 496



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 189/396 (47%), Gaps = 9/396 (2%)

Query: 158 LVNMYA---KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           L+N+Y+   KC   +S   V    P       N ++  Y ++  +++A   +  +    +
Sbjct: 69  LINLYSLFHKCDLARS---VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+ YT++ +L  C     + EG   H +  +        +   L+ MY K G ++ A  
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+ + +R+V++W A+I G  Q  D  + +     M+  G++P+  +          L N
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +    H  V +R  +    V   ++D+YS  G++  A++   +M      VSW   +A
Sbjct: 246 IELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+  N    E +E F +M   +   ++ +  S   A +    L   ++IH   ++ + +S
Sbjct: 303 GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS 362

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++ V + L+  Y KCG  E A+++F  L   D+V+W+++I A  Q G   +A+ LF++M 
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            + ++P   T +++L AC+   L++ G+ +    VK
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/619 (34%), Positives = 344/619 (55%), Gaps = 44/619 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK-NALFDQAFSFFLKLDG 211
           F   +++++Y+K G +  M  +   MP+ D  S N  ++GYA   +  D    + L L  
Sbjct: 72  FSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKD 131

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK------ 265
             +  N  T+STML +C     +D G+Q++ Q +K  + S   V + L+ MY K      
Sbjct: 132 AAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYD 191

Query: 266 -------------------------CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                                    CGM+E+++ +F GL +R+ ISWT +I G  Q+G  
Sbjct: 192 AKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLE 251

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L +   MR  G   +++TF   L +C SL     G   HA VI+       FVG+A+
Sbjct: 252 REALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMYS    I  A+   K M +  + +SW A + G+ +N  +EEA++ F +M RN    D
Sbjct: 312 VDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPD 370

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FT  S++ +C+ L SL    Q H R + S   S + V ++LI  Y KCGS E++ R+F+
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFT 430

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D VSW +++  Y+Q G+A + I LFE+M+  G++P   TF+ VLSACS +GLV+ 
Sbjct: 431 EMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEK 490

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G + FESM+KE+GI+P   H +C++DLLGRAG+LE A  FI+N+P  P    W  L ++C
Sbjct: 491 GLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSC 550

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H D+++ ++ +  ++ L+P + A YV LS++YA  G      + R+ M+ K + KEPG
Sbjct: 551 RVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPG 610

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
            SWI+   K++ F + ++S   + ++Y +L++L  ++ + G+            ++EK  
Sbjct: 611 YSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIK 670

Query: 710 RVLYHSERLAVGFGLISLP 728
            + +HSE+LA+ FGLI +P
Sbjct: 671 MLNHHSEKLAIAFGLIFVP 689



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 64/441 (14%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+++L +C       + K+LH   +K     +T +SN L+T Y K G +  A  VF+ + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 281 QRNVISWTAI-------------------------------INGFKQHGDYEKPLRLVCL 309
           Q N+ SW  I                               I+G+  +G     +R+  L
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 310 MRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           M +D  ++ N  TF+  L  C+  R   +G   + Q++K G     FVG+ +VDMY+ LG
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 369 EIWEAKKQLKEMG------------------------------KSASSVSWNAQIAGFFR 398
            I++AK+   EM                               K   S+SW   I G  +
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N    EA++ F +M     A D+FT+ S+L AC  L +L   +QIH+ ++++  + NV V
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           GS+L++ Y+KC S + AE VF ++   +V+SW +M+  Y QNG + +A+ +F +M   G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            P + T  +V+S+C++   +++G + F       G++      + ++ L G+ G  E + 
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSH 426

Query: 579 IFISNLPIKPTAPIWRPLFAA 599
              + + I+     W  L A 
Sbjct: 427 RLFTEMNIRDEVS-WTALLAG 446



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 223/488 (45%), Gaps = 61/488 (12%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
           Q+FN  P R G+S  +L  +GY N          Y +             CS+ V V   
Sbjct: 92  QIFNLMPFRDGVSW-NLAISGYAN----------YGS-------------CSDAVRVYKL 127

Query: 110 SLESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            L+     L++     +L  CS+  C++LGR+ +  I K     D FV + LV+MY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAK------------------------------- 195
            I        +MP  ++  CN ++ G  +                               
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L  +A   F ++       + +T+ ++L  CGSL A+ EGKQ+HA  ++  +     V
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            +AL+ MY KC  ++ AE+VF+ + Q+NVISWTA++ G+ Q+G  E+ +++   M+ +G+
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           +P+++T    ++SCA+L +   G  FH + +  G+     V  A++ +Y   G    + +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              EM      VSW A +AG+ +  K  E I  F +M+ +    D  T+  +L ACS   
Sbjct: 428 LFTEM-NIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486

Query: 436 SLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSM 493
            +    Q    ++K       V   + +I+   + G  E+A    + +    DVV W ++
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546

Query: 494 IKAYSQNG 501
           + +   +G
Sbjct: 547 LSSCRVHG 554


>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
 gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/635 (33%), Positives = 334/635 (52%), Gaps = 70/635 (11%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L   R  HA I K+ V G+ F+  +LV+ YA+ G ++    V  ++P  +  S N LL+ 
Sbjct: 33  LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSA 92

Query: 193 YAK-------NALFD--------------------------QAFSFFLKLDGIDVQPNHY 219
           YA+        ALF+                           A  F   +   D   N Y
Sbjct: 93  YARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAY 152

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           ++++ L+ C +      G+Q+H    +  +     + +AL+ MY KC   EDA  VF+ +
Sbjct: 153 SFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAM 212

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +RNV+SW ++I  ++Q+G   + L L   M   G  P+E T +  +++CA L     G 
Sbjct: 213 PERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGR 272

Query: 340 MFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM---------------GKS 383
             HA ++K      D V   A+VDMY+  G  WEA+     M                KS
Sbjct: 273 QVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKS 332

Query: 384 ASS---------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           A+                ++WN  IA + +N + EEAI  F Q+ R+      +TY ++L
Sbjct: 333 ANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVL 392

Query: 429 KACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            AC  +  L   +Q H  ++K  F      ES+V VG+SL++ Y K GS +D  +VF ++
Sbjct: 393 NACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 452

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D VSWN+MI  Y+QNGRA+ A+ LFE+M+     P + T + VLSAC HSGLV +G+
Sbjct: 453 AARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGR 512

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM +++GI P   HY+CMVDLLGRAG L+ A   I+++P++P + +W  L  ACR 
Sbjct: 513 RYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRL 572

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E+ + ++ ELDP ++  YV LSNMYAE G  A+    R+ MK + +SK+PGCS
Sbjct: 573 HKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCS 632

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           WIE+  K+  F +++K H    +++  L+ +  ++
Sbjct: 633 WIEIGRKMNVFLARDKRHPCRNEIHNTLRIIQMEM 667



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 41/413 (9%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ E+    G + H L+ ++    D  + ++LV+MYAKC   +    V   MP  ++
Sbjct: 158 LSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNV 217

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N L+  Y +N    +A   F+++      P+  T S++++ C  L+A  EG+Q+HA 
Sbjct: 218 VSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAH 277

Query: 244 TMKLQYLSKTAV-SNALLTMYIKCGM-------------------------------MED 271
            +K   L    V +NAL+ MY KCG                                +ED
Sbjct: 278 MVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVED 337

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A+ VF  +V++NVI+W  +I  + Q+G+ E+ +RL   ++ D I P  YT+   L +C +
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397

Query: 332 LRNSHMGYMFHAQVIKRGMAL------GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           + +  +G   H  V+K G           FVG ++VDMY   G I +  K  + M  +  
Sbjct: 398 IADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-ARD 456

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ-IH 444
           +VSWNA I G+ +N + ++A+  F +M+ ++   D  T   +L AC     +    +  H
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFH 516

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
           S         +    + +++   + G  ++AE + + +    D V W S++ A
Sbjct: 517 SMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 72/429 (16%)

Query: 218 HYTYSTMLA-ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           H   S+ LA +  S   +   +  HA+ +K     +T + N L++ Y + G + DA  VF
Sbjct: 16  HLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVF 75

Query: 277 EGLVQRNVISWTAIINGFKQ---------------------------------HGDYEKP 303
           + +  RN  S+ A+++ + +                                  G     
Sbjct: 76  DEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADA 135

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LR +  M  D    N Y+F  AL++CA+ ++S  G   H  V +   A    + +A+VDM
Sbjct: 136 LRFLAAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDM 195

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+      +A++    M +  + VSWN+ I  + +N    EA+  F +M+    + DE T
Sbjct: 196 YAKCERPEDARRVFDAMPER-NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVT 254

Query: 424 YSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCG-SW--------- 472
            SS++ AC+ L +     Q+H+ +VK  +   ++ + ++L++ Y KCG +W         
Sbjct: 255 LSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314

Query: 473 ---------------------EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
                                EDA+ VFSQ+   +V++WN +I AY+QNG   +AI LF 
Sbjct: 315 PSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE---YGILPEEAHY--SCMVD 566
           ++  + I PT+ T+  VL+AC +   +Q GQ+    ++KE   +   PE   +  + +VD
Sbjct: 375 QLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 434

Query: 567 LLGRAGKLE 575
           +  + G ++
Sbjct: 435 MYLKTGSID 443


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/654 (33%), Positives = 352/654 (53%), Gaps = 26/654 (3%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN--DSFPDGFIDDGCSNTV 104
           +A QLF+K  +R  +S + +I +GY+N         G +T      F   +++ G     
Sbjct: 19  NARQLFDKMLQRDEISWTTII-SGYVN---------GMNTTEALSLFSKMWVEPGLH--- 65

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
                     +D   +   L  C     +  G   H    KT      FV ++LV+MY K
Sbjct: 66  ----------MDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMK 115

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G +     V K+MP  ++ S   ++AG  +     +A ++F  +    V  + YT+S+ 
Sbjct: 116 IGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSA 175

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L  C    A++ G+++H QT+K  + + + V+N L TMY KCG ++    +FE + QR+V
Sbjct: 176 LKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDV 235

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +SWT II    Q G  E  ++    MRE  + PNE+TF   ++ CA+L     G   HA 
Sbjct: 236 VSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAH 295

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           VI+RG+     V  +I+ MYS   ++  A    + + +    +SW+  I+G+ +    EE
Sbjct: 296 VIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR-DIISWSTMISGYAQGGCGEE 354

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A +  S M R     +EF ++S+L  C  +  L   +Q+H+ ++    E N  V S+LI 
Sbjct: 355 AFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALIN 414

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KCGS ++A ++F +    ++VSW +MI  Y+++G +++AI LF+K+   G+RP + T
Sbjct: 415 MYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVT 474

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+AVL+ACSH+GLV  G   F S+ K + I P + HY CM+DLL RAG+L  A   I ++
Sbjct: 475 FIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSM 534

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P +    +W  L  ACR H D+   +  +++IL+LDP+ A  ++TL+NMYA  G   +A 
Sbjct: 535 PFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAA 594

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           E RK+MK K + KEPG SWI+  +++  F S ++SH E   +Y+ L  L  Q E
Sbjct: 595 EVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAE 648



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 169/322 (52%), Gaps = 3/322 (0%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGI 315
           N +L   +K G + +A  +F+ ++QR+ ISWT II+G+    +  + L L   M  E G+
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             + +  ++AL +C    +   G   H   +K       FVG+A+VDMY  +G++ E   
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             KEM    + VSW A IAG  R    +EA+  FS M      CD +T+SS LKAC+   
Sbjct: 125 VFKEM-PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L    +IH + +K  F +   V ++L   YNKCG  +   R+F  +T  DVVSW ++I 
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           +  Q G+   A+  F +M    + P   TF AV+S C+  G ++ G+++   +++  G++
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR-GLV 302

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
              +  + ++ +  +  +L++A
Sbjct: 303 DSLSVANSIMAMYSKCWQLDLA 324


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/604 (32%), Positives = 331/604 (54%), Gaps = 11/604 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  GR  H ++       + F   ++VN+YAKC  I+    + ++MP  D+ S N ++AG
Sbjct: 158 LRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAG 217

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+N    +A    L++     +P+  T  ++L     L A+  G+ +H    +  +   
Sbjct: 218 YAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYM 277

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+ A+L  Y KCG +  A  VF+G+  RNV+SW  +I+G+ Q+G+ E+       M +
Sbjct: 278 VNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLD 337

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G++P   +   AL +CA+L +   G   H  + ++ +     V  +++ MYS    +  
Sbjct: 338 EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDI 397

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A      + K  + V+WNA I G+ +N    EA+  F +M  +D   D FT  S++ A +
Sbjct: 398 AASVFGNL-KHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALA 456

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L      + IH   +++  + NV V ++LI+ + KCG+ + A ++F  +    V++WN+
Sbjct: 457 DLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNA 516

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y  NG  R+A+ LF +M    ++P   TFL+V++ACSHSGLV++G   FESM + Y
Sbjct: 517 MIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENY 576

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G+ P   HY  MVDLLGRAG+L+ A  FI ++P+KP   +   +  ACR H ++++ E  
Sbjct: 577 GLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKT 636

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           + ++ +LDPDD   +V L+NMYA A +       R  M+ K I K PGCS +E+ N+++ 
Sbjct: 637 ADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHT 696

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVLYHSERLAVGF 722
           F+S + +H +  ++Y  L+ L  +++  G+           ++ KE  +  HSERLA+ F
Sbjct: 697 FYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLAIAF 756

Query: 723 GLIS 726
           GL++
Sbjct: 757 GLLN 760



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 231/504 (45%), Gaps = 47/504 (9%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY-LDIASCNCLLAGYAKNALFD 200
           LI K     +      L++++ K   I     V + + + LD+   + +L GYAKN+   
Sbjct: 66  LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY-HTMLKGYAKNSTLR 124

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
            A  F+ ++   +V P  Y ++ +L + G    +  G+++H   +   + S      A++
Sbjct: 125 DAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVV 184

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            +Y KC  +EDA  +FE + QR+++SW  ++ G+ Q+G   + +++V  M+E G  P+  
Sbjct: 185 NLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSI 244

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L + A L+   +G   H    + G      V TA++D Y   G +  A+   K M
Sbjct: 245 TLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGM 304

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
             S + VSWN  I G+ +N ++EEA   F +M+         +    L AC+ L  L   
Sbjct: 305 -SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG 363

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
             +H  + + K   +V V +SLI  Y+KC   + A  VF  L    VV+WN+MI  Y+QN
Sbjct: 364 RYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQN 423

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSAC---------------------------- 532
           G   +A+ LF +M    I+P + T ++V++A                             
Sbjct: 424 GCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVC 483

Query: 533 -----SHS--GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF---IS 582
                +H+  G +Q  +K+F+ M + + I      ++ M+D  G  G    AL     + 
Sbjct: 484 TALIDTHAKCGAIQTARKLFDLMQERHVIT-----WNAMIDGYGTNGHGREALDLFNEMQ 538

Query: 583 NLPIKPTAPIWRPLFAACRCHSDL 606
           N  +KP    +  + AAC  HS L
Sbjct: 539 NGSVKPNEITFLSVIAAC-SHSGL 561



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 187/385 (48%), Gaps = 9/385 (2%)

Query: 216 PNH---YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           P+H   +  + +L +C SL    E  Q+    +K  + ++      L++++ K   + +A
Sbjct: 39  PSHVYRHPSAILLELCTSLK---ELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEA 95

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VFE +  +  + +  ++ G+ ++      +R    MR D + P  Y FT  L      
Sbjct: 96  ARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGEN 155

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H  VI  G     F  TA+V++Y+   +I +A K  + M +    VSWN  
Sbjct: 156 LDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQR-DLVSWNTV 214

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           +AG+ +N     A++   QM       D  T  S+L A + L +L     IH    ++ F
Sbjct: 215 VAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGF 274

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E  V+V +++++ Y KCGS   A  VF  +++ +VVSWN+MI  Y+QNG + +A   F K
Sbjct: 275 EYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLK 334

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+ EG+ PTN + +  L AC++ G ++ G+ V   ++ E  I  + +  + ++ +  +  
Sbjct: 335 MLDEGVEPTNVSMMGALHACANLGDLERGRYV-HRLLDEKKIGFDVSVMNSLISMYSKCK 393

Query: 573 KLEIALIFISNLPIKPTAPIWRPLF 597
           +++IA     NL  K T   W  + 
Sbjct: 394 RVDIAASVFGNLKHK-TVVTWNAMI 417



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 154/315 (48%), Gaps = 26/315 (8%)

Query: 83  GYSTRN----DSFPDGFIDDGCSNTVPVTCYSLESLLDKQF------VIEVLSYCSREEC 132
           G S+RN    ++  DG+  +G S     T      +LD+        ++  L  C+    
Sbjct: 303 GMSSRNVVSWNTMIDGYAQNGESEEAFAT---FLKMLDEGVEPTNVSMMGALHACANLGD 359

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE GR  H L+ +  +  D  V  SL++MY+KC  +    +V   + +  + + N ++ G
Sbjct: 360 LERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILG 419

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+N   ++A + F ++   D++P+ +T  +++     LS   + K +H   ++      
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKN 479

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V  AL+  + KCG ++ A  +F+ + +R+VI+W A+I+G+  +G   + L L   M+ 
Sbjct: 480 VFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQN 539

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGY----MFHAQVIKRGMALG---DFVGTAIVDMYS 365
             + PNE TF   +A+C     SH G     M++ + +K    L    D  G A+VD+  
Sbjct: 540 GSVKPNEITFLSVIAAC-----SHSGLVEEGMYYFESMKENYGLEPTMDHYG-AMVDLLG 593

Query: 366 GLGEIWEAKKQLKEM 380
             G + +A K +++M
Sbjct: 594 RAGRLDDAWKFIQDM 608


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/639 (34%), Positives = 361/639 (56%), Gaps = 24/639 (3%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLEL-GRRYHALITKTAVCG-DQFVTASLVNMYAKCGDI 168
           E LL   F +      C   E   L G     L+ K    G D  V  +L++M+AK GD+
Sbjct: 146 EGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDL 205

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
            +M  V   +    +     L+  YA++   D+A   FL +     QP+ YT S+ML+ C
Sbjct: 206 VAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSAC 265

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG---MMEDAESVFEGLVQRNVI 285
             L +   G+QLH+  ++L   S + VS  L+ MY K      + +A  VF  + + NV+
Sbjct: 266 TELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVM 325

Query: 286 SWTAIINGFKQHGDYE-KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +WTA+++G+ Q G  + + + L C M  +GI PN  T++  L +CA+L +   G   H  
Sbjct: 326 AWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTH 385

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            +K  +A  + VG A+V MY+  G I EA+    ++ +  + VS++  + G  R+   ++
Sbjct: 386 CVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK-NMVSFSGNLDGDGRSNTYQD 444

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
                 Q+ R +     FT+ S++ A + +  L   +++H+  +K+ F S+  +G+SL+ 
Sbjct: 445 -----YQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVS 499

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y++CG   DA +VF ++   +V+SW SMI   +++G A +A+ LF  M+  G++P + T
Sbjct: 500 MYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVT 559

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           ++AVLSACSH+GLV++G++ F  M K +G++P   HY+CMVDLLGR+G +E AL FI+ +
Sbjct: 560 YIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEM 619

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P +  A +W+ L  AC+ H+++ + E  +  +++L+P D A YV LSN+YAEAGL     
Sbjct: 620 PCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVA 679

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-- 702
             R LM+ K + KE G SW+ V N I+ F + + SH +  ++Y KL+ L+++I+ +G+  
Sbjct: 680 RIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEEIYTKLETLIREIKVMGYVP 739

Query: 703 ---------TDNEKEDRVLYHSERLAVGFGLISLPAKNK 732
                    +D  KE  +L HSE++AV FGLIS  +  K
Sbjct: 740 DTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATK 778



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 11/327 (3%)

Query: 234 IDEGKQLHAQTMKLQYLSKT--AVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTA 289
           I  G+ L    ++   L +T   V+N+LLT+Y KC  +  A SVF+G+    R+++SWTA
Sbjct: 63  IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM-GYMFHAQVIKR 348
           + +   ++G   + LRL     E+G+ PN +T   A  +C +    H+ G      V K 
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182

Query: 349 GMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
           G    D  VG A++DM++  G++   ++    + +  + V W   I  + ++  ++EA+E
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFER-TVVVWTLLITRYAQSGYSDEAVE 241

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F  M+ N    D++T SS+L AC+ L S    +Q+HS  ++   ES+  V   L++ Y 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 468 KCG---SWEDAERVFSQLTAADVVSWNSMIKAYSQNG-RARKAIILFEKMVVEGIRPTNS 523
           K     S  +A  VF+++   +V++W +++  Y Q G +  + +ILF KM+ EGIRP + 
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVK 550
           T+ ++L AC++ G    G+++    VK
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVK 388



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 245/533 (45%), Gaps = 25/533 (4%)

Query: 133 LELGR--RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNC 188
           + LGR  + H L T + +  D  V  SL+ +Y+KC  + +  +V   MP    D+ S   
Sbjct: 63  IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID-EGKQLHAQTMKL 247
           + +  ++N    +A   F +     + PN +T       C +       G  +     KL
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182

Query: 248 QYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            +  +  +V  AL+ M+ K G +     VF+GL +R V+ WT +I  + Q G  ++ + L
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY-- 364
              M E+G  P++YT +  L++C  L +  +G   H+  ++ G+     V   +VDMY  
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK 302

Query: 365 SGLGE-IWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAFSQMVRNDAACDEF 422
           S  G+ +  A++    M K  + ++W A ++G+  R  +  + +  F +M+      +  
Sbjct: 303 SHNGQSLHNAREVFNRMPKH-NVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYSS+LKAC+ L    +  QIH+  VKS       VG++L+  Y + GS E+A   F QL
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL--AVLSACSHSGLVQD 540
              ++VS++  +     +GR+      ++   +E +    STF   +++SA +  G++  
Sbjct: 422 YEKNMVSFSGNLDG---DGRSNT----YQDYQIERMELGISTFTFGSLISAAASVGMLTK 474

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           GQ++    +K  G   + A  + +V +  R G L  A      +        W  + +  
Sbjct: 475 GQRLHALSLKA-GFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVIS-WTSMISGL 532

Query: 601 RCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
             H     A E     I   + P+D   Y+ + +  + AGL  + +E  ++M+
Sbjct: 533 AKHGYAARALELFHDMIAAGVKPND-VTYIAVLSACSHAGLVKEGKEHFRMMQ 584


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/637 (34%), Positives = 354/637 (55%), Gaps = 14/637 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   I VL+   R + L LG++ H +  K  +     V+ SL+NMY K   I     V 
Sbjct: 321 DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAI 234
             M   D+ S N ++AG A++ L  +A   F++L    ++P+HYT +++L    SL   +
Sbjct: 381 NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGL 440

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              KQ+H   +K   ++ + VS AL+  Y +   M++AE +F G    ++++W A+++G+
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGY 499

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q  D  K L L  LM + G   +++T    L +C  L   + G   HA  IK G  L  
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDL 559

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V + I+DMY   G++  A+     +      V+W   I+G   N + E A+  FSQM  
Sbjct: 560 WVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTLISGCIENGEEERALHVFSQMRL 618

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                DEFT +++ KA S L +L    QIH+  +K    S+  VG+SL++ Y KCGS +D
Sbjct: 619 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDD 678

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +F ++   ++ +WN+M+   +Q+G  ++A+ LF++M   GI+P   TF+ VLSACSH
Sbjct: 679 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH 738

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           SGLV +  K   SM ++YGI PE  HYSC+ D LGRAG ++ A   I ++ ++ +A ++R
Sbjct: 739 SGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYR 798

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L AACR   D +  + ++ ++LEL+P D++ YV LSNMYA A    + +  R +MK  +
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
           + K+PG SWIEV NKI+ F   ++S+ +   +Y+K+K +++ I+  G+            
Sbjct: 859 VKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVE 918

Query: 704 DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + EKE  + YHSE+LAV FGL+S P        + L 
Sbjct: 919 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 955



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 225/468 (48%), Gaps = 14/468 (2%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           +I S N +L+GY     +      F+ +   D++ +  T+  +LA    L ++  G+Q+H
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +KL       VSN+L+ MY K   +  A +VF  + +R++ISW ++I G  Q  D E
Sbjct: 346 CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQ-SDLE 404

Query: 302 KPLRLVCLMRED---GIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVG 357
             +  VCL  +    G+ P+ YT T  L + +SL     +    H   IK       FV 
Sbjct: 405 --VEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVS 462

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           TA++D YS    + EA+        +   V+WNA ++G+ ++    + +E F+ M +   
Sbjct: 463 TALIDAYSRNRCMKEAEVLFGR--NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGE 520

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+FT +++LK C  L ++   +Q+H+  +KS ++ ++ V S +++ Y KCG    A+ 
Sbjct: 521 RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQF 580

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F  +   D V+W ++I    +NG   +A+ +F +M + G+ P   T   +  A S    
Sbjct: 581 AFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTA 640

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           ++ G+++  + +K      +    + +VD+  + G ++ A      + +      W  + 
Sbjct: 641 LEQGRQIHANALK-LNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAML 698

Query: 598 AACRCHSDLKMAEFISKQI--LELDPDDAAVYVTLSNMYAEAGLQADA 643
                H + K A  + KQ+  L + P D   ++ + +  + +GL ++A
Sbjct: 699 VGLAQHGEGKEALQLFKQMESLGIKP-DKVTFIGVLSACSHSGLVSEA 745



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 216/463 (46%), Gaps = 37/463 (7%)

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           +H    K  + GD FV  +LVN+Y K G +K    + ++MPY D+   N +L  Y +   
Sbjct: 174 FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGF 233

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            ++A         ID+    +T                   LH   + L+ LS+ +  ++
Sbjct: 234 KEEA---------IDLSSAFHT-----------------SGLHPNEITLRLLSRISGDDS 267

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
                 + G ++  E+  +      +IS   I++G+   G Y   L+    M E  ++ +
Sbjct: 268 ------EAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECD 321

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           + TF + LA+   L +  +G   H   +K G+ L   V  ++++MY  L +I  A+    
Sbjct: 322 QVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFN 381

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP-SL 437
            M +    +SWN+ IAG  ++    EA+  F Q++R     D +T +S+LKA S LP  L
Sbjct: 382 NMSER-DLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGL 440

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           +  +QIH   +K+   ++  V ++LI+AY++    ++AE +F +    D+V+WN+M+  Y
Sbjct: 441 SLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGY 499

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +Q+    K + LF  M  +G R  + T   VL  C     +  G++V    +K  G   +
Sbjct: 500 TQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS-GYDLD 558

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
               S ++D+  + G +  A     ++P+ P    W  L + C
Sbjct: 559 LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLISGC 600



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 186/412 (45%), Gaps = 50/412 (12%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LG+  HA I       ++F+  +L++MY+KCG +     V  +MP  D+ S N +LA 
Sbjct: 62  LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121

Query: 193 YAKNAL-----FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           YA+++        +AF  F  L    V  +  T S ML +C     +   +  H    K+
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                  V+ AL+ +Y+K G +++   +FE +  R+V+ W  ++  + + G  E+ + L 
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 241

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
                 G+ PNE   T+ L S  S  +S  G                             
Sbjct: 242 SAFHTSGLHPNE--ITLRLLSRISGDDSEAG----------------------------- 270

Query: 368 GEIWEAKKQLK--EMGKSASSV----SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
                   Q+K  E G  AS+V    S N  ++G+    +    ++ F  MV +D  CD+
Sbjct: 271 --------QVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQ 322

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T+  +L     L SLA  +Q+H   +K   +  + V +SLI  Y K      A  VF+ 
Sbjct: 323 VTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNN 382

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           ++  D++SWNS+I   +Q+    +A+ LF +++  G++P + T  +VL A S
Sbjct: 383 MSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 134/318 (42%), Gaps = 48/318 (15%)

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK  HA+ + L+   +  + N L++MY KCG +  A  VF+ + +R+++SW +I+  + Q
Sbjct: 65  GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124

Query: 297 HGD-----YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM-----FHAQVI 346
             +      ++   L  ++R+D +  +  T +  L  C      H GY+     FH    
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCL-----HSGYVCASESFHGYAC 179

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G+   DFV  A+V++Y   G++ E +   +EM      V WN  +  +      EEAI
Sbjct: 180 KIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEM-PYRDVVLWNLMLKAYLEMGFKEEAI 238

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           +                 SS      L P+  T  ++ SRI     E+            
Sbjct: 239 D----------------LSSAFHTSGLHPNEITL-RLLSRISGDDSEA------------ 269

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            +  S+E+     +    ++++S N ++  Y   G+    +  F  MV   +     TF+
Sbjct: 270 GQVKSFENGNDASA---VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFI 326

Query: 527 AVLSACSHSGLVQDGQKV 544
            VL+       +  GQ+V
Sbjct: 327 LVLATAVRLDSLALGQQV 344


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/683 (32%), Positives = 361/683 (52%), Gaps = 43/683 (6%)

Query: 26  VKPKKCNHRKTVEVKEPFASYS-------ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKG 78
           +K K  NH   V +     +YS       AC+LF++  +R   S + LI      + E G
Sbjct: 95  LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI----AGLAENG 150

Query: 79  ISRNGYS-----TRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECL 133
           +  +G+           FPD F   G                       +L  C   + +
Sbjct: 151 LFLDGFEFFCEMQSQGIFPDQFAYSG-----------------------ILQICIGLDSI 187

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ELG   HA I         FV+ +L+NMYAK  +I+    V   M  +++ S N ++ G+
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             N L+  AF  FL++ G  V P+  T+  +    G L  +++ K++    ++L   S T
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNT 307

Query: 254 AVSNALLTMYIKCGMMEDAESVFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            V  AL+ M  KCG +++A S+F    +  R    W A+I+G+ + G  EK L L   M 
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
           ++ I  + YT+     + A+L+   +G   HA+ IK G+ +    +  A+ + Y+  G +
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            + +K    M +    +SW + +  + +  + ++AIE FS M     A ++FT+SS+L +
Sbjct: 428 EDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+ L  L   +Q+H  I K   + +  + S+L++ Y KCG   DA++VF++++ AD VSW
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            ++I  ++Q+G    A+ LF +MV  G+ P   TFL VL ACSH GLV++G + F+ M K
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
            YG++PE  HY+C+VDLL R G L  A+ FIS +P++P   +W+ L  ACR H ++++ E
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             +++IL    +++A YV LSN Y E+G   D    R LMK + + KEPGCSWI V   +
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTL 726

Query: 671 YRFFSQNKSHSEMPKVYEKLKQL 693
           ++F++ ++ H E  K+Y KL++L
Sbjct: 727 HKFYAGDQQHPEKDKIYAKLEEL 749


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/590 (35%), Positives = 337/590 (57%), Gaps = 7/590 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  VLS CS    LE G++ HA I +     D  +   L++ Y KCG +++   + 
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLF 307

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +I S   LL+GY +N+L  +A   F  +    ++P+ +  S++L  C SL A++
Sbjct: 308 DGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALE 367

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q+HA T+K    + + V+N+L+ MY KC  + +A  VF+     +V+ + A+I G+ 
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYS 427

Query: 296 QHG---DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           + G   +    L +   MR   I P+  TF   L + ASL +  +    H  + K G+ L
Sbjct: 428 RLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNL 487

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F G+A++ +YS    + +++    EM K    V WN+  +G+ +  + EEA+  F ++
Sbjct: 488 DIFAGSALIAVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFSGYVQQSENEEALNLFLEL 546

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             +    DEFT+  ++ A   L SL   ++ H +++K   E N ++ ++L++ Y KCGS 
Sbjct: 547 QLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA + F    + DVV WNS+I +Y+ +G  RKA+ + EKM+ EGI P   TF+ VLSAC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GLV+DG K FE M++ +GI PE  HY CMV LLGRAG+L  A   I  +P KP A +
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIV 725

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           WR L + C    ++++AE+ ++  +  DP D+  +  LSN+YA  G+  DA++ R+ MK 
Sbjct: 726 WRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKF 785

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           + + KEPG SWIE+  +++ F S++KSH +  ++YE L  L+ QI   GH
Sbjct: 786 EGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR--GH 833



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/515 (25%), Positives = 249/515 (48%), Gaps = 7/515 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
            + + K+    D +V   L++ Y K G+I     V   +P     +   +++G  K    
Sbjct: 171 QSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             +   F +L   +V P+ Y  ST+L+ C  L  ++ GKQ+HA  ++  +    ++ N L
Sbjct: 231 YVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVL 290

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +  Y+KCG +  A  +F+G+  +N+ISWT +++G+KQ+  +++ + L   M + G+ P+ 
Sbjct: 291 IDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDM 350

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +  +  L SCASL     G   HA  IK  +    +V  +++DMY+    + EA+K   +
Sbjct: 351 FACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF-D 409

Query: 380 MGKSASSVSWNAQIAGFFR---NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           +  +   V +NA I G+ R     +  +A+  F  M          T+ S+L+A + L S
Sbjct: 410 IFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTS 469

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +QIH  + K     ++  GS+LI  Y+ C   +D+  VF ++   D+V WNSM   
Sbjct: 470 LGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSG 529

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y Q     +A+ LF ++ +   RP   TF+ +++A  +   +Q GQ+ F   + + G+  
Sbjct: 530 YVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQE-FHCQLLKRGLEC 588

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
                + ++D+  + G  E A     +   +     W  + ++   H + + A + + K 
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV-CWNSVISSYANHGEGRKALQMLEKM 647

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           + E    +   +V + +  + AGL  D  +Q +LM
Sbjct: 648 MCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 249/526 (47%), Gaps = 23/526 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  I  + +  D +++  L+N+Y++ G +     V ++MP  ++ + + +++    +  +
Sbjct: 67  HGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFY 126

Query: 200 DQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK----QLHAQTMKLQYLSKTA 254
           +++   FL         PN Y  S+ +  C  L     G+    QL +  +K ++     
Sbjct: 127 EESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDG--SGRWMVFQLQSFLVKSRFDRDVY 184

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V   L+  Y+K G ++ A  VF+ L +++ ++WT +I+G  + G     L+L   + E  
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+ Y  +  L++C+ L     G   HA +++ G      +   ++D Y   G +  A 
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAH 304

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K    M  + + +SW   ++G+ +N   +EA+E F+ M +     D F  SSIL +C+ L
Sbjct: 305 KLFDGM-PNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L    Q+H+  +K+   ++ +V +SLI+ Y KC    +A +VF    A DVV +N+MI
Sbjct: 364 HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMI 423

Query: 495 KAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           + YS+ G       A+ +F  M    IRP+  TF+++L A +    +   +++   M K 
Sbjct: 424 EGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK- 482

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-- 609
           +G+  +    S ++ +      L+ + +    + +K    IW  +F+     S+ + A  
Sbjct: 483 FGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFSGYVQQSENEEALN 541

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAG----LQADAEEQRKLMK 651
            F+  Q+    PD+     T  +M   AG    LQ   E   +L+K
Sbjct: 542 LFLELQLSRDRPDE----FTFVDMVTAAGNLASLQLGQEFHCQLLK 583



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 163/314 (51%), Gaps = 4/314 (1%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H Q +       T +SN L+ +Y + G M  A  VFE + +RN+++W+ +++    HG 
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 300 YEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ--VIKRGMALGDFV 356
           YE+ L +     R     PNEY  +  + +C+ L  S    +F  Q  ++K       +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GT ++D Y   G I  A+     + +  S+V+W   I+G  +  ++  +++ F Q++  +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D +  S++L ACS+LP L   +QIH+ I++   E +  + + LI++Y KCG    A 
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAH 304

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F  +   +++SW +++  Y QN   ++A+ LF  M   G++P      ++L++C+   
Sbjct: 305 KLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLH 364

Query: 537 LVQDGQKVFESMVK 550
            ++ G +V    +K
Sbjct: 365 ALEFGTQVHAYTIK 378



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 85/181 (46%), Gaps = 7/181 (3%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++ +L+  +L   L     +H +I+ S  E + ++ + L+  Y++ G    A +VF ++ 
Sbjct: 47  FARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP 106

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILF-EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
             ++V+W++M+ A + +G   +++++F +        P      + + AC  SGL   G+
Sbjct: 107 ERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGR 164

Query: 543 KV---FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            +    +S + +     +    + ++D   + G ++ A +    LP K T   W  + + 
Sbjct: 165 WMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVT-WTTMISG 223

Query: 600 C 600
           C
Sbjct: 224 C 224


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/632 (33%), Positives = 342/632 (54%), Gaps = 45/632 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F   +L++  A    +  M A+   M   DI S N ++AG++      QA   +L L   
Sbjct: 73  FTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQA 132

Query: 213 D--VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------- 263
           D  V+P+  T STM+    +L     GKQ H Q ++L + +   V + L+ MY       
Sbjct: 133 DSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVG 192

Query: 264 ------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
                                   ++C M+E+A  +FE +  R+ I+WT ++ GF Q+G 
Sbjct: 193 DAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGL 252

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L +   MR  GI  ++YTF   L +C +L     G   HA +I+       FVG+A
Sbjct: 253 ESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSA 312

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMYS    I  A+   + M    + +SW A I G+ +N  +EEA+  FS+M R+    
Sbjct: 313 LVDMYSKCRSIKLAETVFRRM-TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D++T  S++ +C+ L SL    Q H   + S     + V ++L+  Y KCGS EDA R+F
Sbjct: 372 DDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            +++  D VSW +++  Y+Q GRA++ I LFEKM+ +G++P   TF+ VLSACS +G V+
Sbjct: 432 DEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVE 491

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+  F SM K++GI+P + HY+CM+DL  R+GKL+ A  FI  +P+ P A  W  L +A
Sbjct: 492 KGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR   D+++ ++ ++ +LE+DP + A YV L +M+A  G   +  + R+ M+ +++ KEP
Sbjct: 552 CRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEP 611

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKE 708
           GCSWI+  NK++ F + ++SH     +YEKL+ L  ++ + G+            D +K 
Sbjct: 612 GCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKV 671

Query: 709 DRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             V +HSE+LA+ FGLI +P +      + L 
Sbjct: 672 HMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLR 703



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 72/423 (17%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N LL  Y K     +A   F  +      PN +TY                         
Sbjct: 45  NHLLTAYGKAGRHARARRVFDAMP----HPNLFTY------------------------- 75

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR- 305
                     NALL+      ++ D E++F  + QR+++S+ A+I GF   G + + +R 
Sbjct: 76  ----------NALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRV 125

Query: 306 -LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
            L  L  +  + P+  T +  + + ++L +  +G  FH Q+++ G     FVG+ +VDMY
Sbjct: 126 YLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMY 185

Query: 365 SGLGEIWEAK------------------------------KQLKEMGKSASSVSWNAQIA 394
           + +  + +AK                              ++L E+     S++W   + 
Sbjct: 186 AKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVT 245

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           GF +N    EA+E F +M     A D++T+ SIL AC  L +L   +QIH+ I++++++ 
Sbjct: 246 GFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDD 305

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           NV VGS+L++ Y+KC S + AE VF ++T  +++SW ++I  Y QNG + +A+ +F +M 
Sbjct: 306 NVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQ 365

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            +GI P + T  +V+S+C++   +++G + F  +    G++      + +V L G+ G +
Sbjct: 366 RDGIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSI 424

Query: 575 EIA 577
           E A
Sbjct: 425 EDA 427



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 196/401 (48%), Gaps = 36/401 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAK---CGDIK---------------------- 169
           LG+++H  I +     + FV + LV+MYAK    GD K                      
Sbjct: 158 LGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLL 217

Query: 170 --SMVAVVKQ----MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
              MV   ++    M   D  +   ++ G+ +N L  +A   F ++    +  + YT+ +
Sbjct: 218 RCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGS 277

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+LSA+++GKQ+HA  ++ +Y     V +AL+ MY KC  ++ AE+VF  +  +N
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKN 337

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +ISWTA+I G+ Q+G  E+ +R+   M+ DGIDP++YT    ++SCA+L +   G  FH 
Sbjct: 338 IISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHC 397

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     V  A+V +Y   G I +A +   EM      VSW A ++G+ +  + +
Sbjct: 398 LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVSGYAQFGRAK 456

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSS 461
           E I+ F +M+      D  T+  +L ACS    +         + K       + H  + 
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHY-TC 515

Query: 462 LIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNG 501
           +I+ Y++ G  ++AE    Q+    D + W +++ A    G
Sbjct: 516 MIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 155/283 (54%), Gaps = 5/283 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C     LE G++ HA I +T    + FV ++LV+MY+KC  IK    V
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETV 329

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++M   +I S   L+ GY +N   ++A   F  ++ DGID  P+ YT  ++++ C +L+
Sbjct: 330 FRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID--PDDYTLGSVISSCANLA 387

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +++EG Q H   +    +    VSNAL+T+Y KCG +EDA  +F+ +   + +SWTA+++
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVS 447

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMA 351
           G+ Q G  ++ + L   M   G+ P+  TF   L++C+       G   FH+     G+ 
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIV 507

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             D   T ++D+YS  G++ EA++ +K+M     ++ W   ++
Sbjct: 508 PIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLS 550



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 9/214 (4%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+  +    N+   ++L+          D E +F+ +T  D+VS+N++I  +S  G   +
Sbjct: 62  RVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQ 121

Query: 506 AIILFEKMVV--EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           A+ ++  ++     +RP+  T   ++ A S  G    G++ F   +   G        S 
Sbjct: 122 AVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQ-FHCQILRLGFGANAFVGSP 180

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD- 622
           +VD+  +   +  A      +  K        +    RC    KM E  ++++ E+  D 
Sbjct: 181 LVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC----KMVEE-ARRLFEVMTDR 235

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
           D+  + T+   + + GL+++A E  + M+ + I+
Sbjct: 236 DSITWTTMVTGFTQNGLESEALEIFRRMRFQGIA 269


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/638 (33%), Positives = 352/638 (55%), Gaps = 27/638 (4%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           ++  F + +L  C  ++ +   ++ HA I KT    D F+   LVN+YAKCG +++   V
Sbjct: 67  VESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKV 126

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++P  ++ S   L+ GY  ++  + A   F ++      P +YT  T L+    L + 
Sbjct: 127 FDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSK 186

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + GKQ+H  ++K +     ++ N+L ++Y KCG +E A   F  +  +NVISWT +I+ +
Sbjct: 187 ELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAW 246

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G+    L+    M  + ++PNE+T T AL+ C  +++  +G   H+  IK G     
Sbjct: 247 GDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNL 306

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTE 403
            +  +I+ +Y   G I EAKK   EM ++ S V+WNA IAG  R           +Q   
Sbjct: 307 PIKNSIMYLYLKCGWIHEAKKLFDEM-ETISLVTWNAMIAGHARMMDFAKDDLAAHQCGT 365

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA+  F ++ R+    D FT+SS+L  CS L +L   EQ+H++ +K+ F S+V VG++L+
Sbjct: 366 EALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALV 425

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             YNKCGS E A + F +++   ++SW SMI  Y+QNG+ ++A++LFE M + G+RP   
Sbjct: 426 NMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKI 485

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ VLSACSH+G+V +    F+ M  EY I P   HY+C++D+  R G+L+ A  FI  
Sbjct: 486 TFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKE 545

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           + ++P   IW  L A CR    L++  + ++Q+L L P D   Y  L NMY  AG   + 
Sbjct: 546 MDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEV 605

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
              RK+MK +++ +    SWI + +KIY F    +SH++  ++YE L  L ++ +  G+ 
Sbjct: 606 SRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKSFGYE 665

Query: 704 DNEKED---------------RVLYHSERLAVGFGLIS 726
             E  +                ++YHSE+LA+ FGL++
Sbjct: 666 WEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLN 703



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           EA S  +R     +   Y  IL+ C     ++  ++IH+ IVK+    +  + + L+  Y
Sbjct: 56  EALS-FIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVY 114

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG+ E A +VF +L   +VVSW +++  Y  + +   A+ +F +M+  G  PTN T  
Sbjct: 115 AKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLG 174

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
             LSA S     + G+++    +K Y I  + +  + +  L  + G LE A+
Sbjct: 175 TALSASSDLHSKELGKQIHGYSIK-YRIEFDASIGNSLCSLYSKCGSLECAV 225


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/628 (32%), Positives = 343/628 (54%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C  E  L +G+  H L+ K+    D F    L NMYAKC  +     V  +MP  D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERD 200

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++AGY++N +   A      +   +++P+  T  ++L    +L  I  GK++H 
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             M+  + S   ++ AL+ MY KCG ++ A  +F+G+++RNV+SW ++I+ + Q+ + ++
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M ++G+ P + +   AL +CA L +   G   H   ++  +     V  +++ 
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLIS 380

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY    E+  A     ++ +S + VSWNA I GF +N +  EA+  FSQM       D F
Sbjct: 381 MYCKCKEVDTAASMFGKL-QSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTF 439

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY S++ A + L      + IH  ++++  + NV V ++L++ Y KCG+   A  +F  +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +   V +WN+MI  Y  +G  + A+ LFE+M    IRP   TFL+V+SACSHSGLV+ G 
Sbjct: 500 SERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGL 559

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F  M + Y I P   HY  MVDLLGRAG+L  A  FI  +P+KP   ++  +  AC+ 
Sbjct: 560 KCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++  AE +++++ EL+P+D   +V L+N+Y  A +     + R  M  + + K PGCS
Sbjct: 620 HKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ FFS + +H    K+Y  L++L+ QI++ G+           D+ KE  + 
Sbjct: 680 MVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLILGLEDDVKEQLLS 739

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ FGL++  A       + L 
Sbjct: 740 SHSEKLAISFGLLNTTAGTTIHVRKNLR 767



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 221/454 (48%), Gaps = 5/454 (1%)

Query: 130 EECLELGRRYH--ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           E C  L    H   LI K  +  +      LV+++ + G +     V + +         
Sbjct: 45  ERCSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYY 104

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            +L G+AK +  D+A  FF+++   +V+P  Y ++ +L +CG  + +  GK++H   +K 
Sbjct: 105 TMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
            +         L  MY KC  + +A  VF+ + +R+++SW  I+ G+ Q+G     L +V
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
            LM E+ + P+  T    L + ++LR   +G   H   ++ G      + TA+VDMY+  
Sbjct: 225 NLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKC 284

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G +  A+     M +  + VSWN+ I  + +N+  +EA+  F +M+       + +    
Sbjct: 285 GSLKTARLLFDGMLER-NVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L AC+ L  L     IH   V+ + + NV V +SLI  Y KC   + A  +F +L +  +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSWN+MI  ++QNGR  +A+  F +M    ++P   T+++V++A +   +     K    
Sbjct: 404 VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA-KWIHG 462

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIF 580
           +V    +       + +VD+  + G + IA LIF
Sbjct: 463 VVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIF 496



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 239/541 (44%), Gaps = 57/541 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL   S    + +G+  H    +        +  +LV+MYAKCG +K+   +   M 
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGML 298

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N ++  Y +N    +A   F K+    V+P   +    L  C  L  ++ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  +++L+     +V N+L++MY KC  ++ A S+F  L  R ++SW A+I GF Q+G 
Sbjct: 359 IHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGR 418

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L     M+   + P+ +T+   + + A L  +H     H  V++  +    FV TA
Sbjct: 419 PIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTA 478

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY+  G I  A + + +M       +WNA I G+  +   + A+E F +M +     
Sbjct: 479 LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRP 537

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T+ S++ ACS                           S L+EA  KC  +   +  +
Sbjct: 538 NGVTFLSVISACS--------------------------HSGLVEAGLKC--FHMMKENY 569

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S   + D   + +M+    + GR  +A     +M V   +P  + + A+L AC     V 
Sbjct: 570 SIEPSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPV---KPAVNVYGAMLGACQIHKNVN 624

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRA-------GKLEIALIFISNLPIKPTAPI 592
             +KV E +   + + PE+  Y  ++  + RA       G++ ++++    L   P   +
Sbjct: 625 FAEKVAERL---FELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLR-QGLRKTPGCSM 680

Query: 593 ------WRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
                     F+    H S  K+  F+ K I ++     A YV  +N+    GL+ D +E
Sbjct: 681 VEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKE---AGYVPDTNLI--LGLEDDVKE 735

Query: 646 Q 646
           Q
Sbjct: 736 Q 736


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/538 (36%), Positives = 318/538 (59%), Gaps = 17/538 (3%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V  +  TYS ++  C +  A+ EGK++H       Y  KT ++N L+ MY+K  ++E+A+
Sbjct: 281 VWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQ 340

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ + +RNV+SWT +I+ +      ++ +RL+  M  DG+ PN +TF+  L +C  L 
Sbjct: 341 VLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLY 400

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +       H+ ++K G+    FV +A++D+YS +GE+ EA K  +EM  +  SV WN+ I
Sbjct: 401 DLKQ---LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM-MTGDSVVWNSII 456

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           A F ++   +EA+  +  M R     D+ T +S+L+AC+ L  L    Q H  ++K  F+
Sbjct: 457 AAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FD 514

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            ++ + ++L++ Y KCGS EDA+ +F+++   DV+SW++MI   +QNG + +A+ LFE M
Sbjct: 515 QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM 574

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
            V+G +P + T L VL ACSH+GLV +G   F SM   YGI P   HY CM+DLLGRA K
Sbjct: 575 KVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEK 634

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L+  +  I  +  +P    WR L  ACR   ++ +A + +K+IL+LDP D   YV LSN+
Sbjct: 635 LDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNI 694

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           YA +    D  E R+ MK + I KEPGCSWIEV  +I+ F   +KSH ++ ++  +L Q 
Sbjct: 695 YAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQF 754

Query: 694 MQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + ++   G+  +           ++ED + YHSE+LA+ FG++S P +      + L+
Sbjct: 755 ICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEKTIRIWKNLK 812



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 181/394 (45%), Gaps = 20/394 (5%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E++  C     +  G+R H  I         F+T  L+NMY K   ++    +  +MP  
Sbjct: 290 ELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPER 349

Query: 182 DIASCNCLLAGYAKNALFDQAFSF--FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           ++ S   +++ Y+   L D+A     F+  DG  V PN +T+S++L  C  L  +   KQ
Sbjct: 350 NVVSWTTMISAYSNAQLNDRAMRLLAFMFRDG--VMPNMFTFSSVLRACERLYDL---KQ 404

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH+  MK+   S   V +AL+ +Y K G + +A  VF  ++  + + W +II  F QH D
Sbjct: 405 LHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSD 464

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ L L   MR  G   ++ T T  L +C SL    +G   H  V+K    L   +  A
Sbjct: 465 GDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKFDQDL--ILNNA 522

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY   G + +AK     M K    +SW+  IAG  +N  + EA+  F  M       
Sbjct: 523 LLDMYCKCGSLEDAKFIFNRMAKK-DVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKP 581

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKF---ESNVHVGSSLIEAYNKCGSWEDAE 476
           +  T   +L ACS    L      + R + + +       H G  +++   +    +D  
Sbjct: 582 NHITILGVLFACS-HAGLVNEGWYYFRSMNNLYGIDPGREHYG-CMLDLLGRAEKLDDMV 639

Query: 477 RVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIIL 509
           ++  ++    DVV+W +++ A     RAR+ + L
Sbjct: 640 KLIHEMNCEPDVVTWRTLLDA----CRARQNVDL 669



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 169/374 (45%), Gaps = 42/374 (11%)

Query: 51  LFNKSPKRAGLSTSDLIFNGYMN--IEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTC 108
           LF+K P+R  +S + +I + Y N  + ++ +    +  R+   P+ F             
Sbjct: 342 LFDKMPERNVVSWTTMI-SAYSNAQLNDRAMRLLAFMFRDGVMPNMFT------------ 388

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
                         VL  C R   L   ++ H+ I K  +  D FV ++L+++Y+K G++
Sbjct: 389 -----------FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGEL 434

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
              + V ++M   D    N ++A +A+++  D+A   +  +  +    +  T +++L  C
Sbjct: 435 LEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRAC 494

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            SLS ++ G+Q H   +K        ++NALL MY KCG +EDA+ +F  + +++VISW+
Sbjct: 495 TSLSLLELGRQAHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFH 342
            +I G  Q+G   + L L   M+  G  PN  T    L +C     SH G      Y F 
Sbjct: 553 TMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFAC-----SHAGLVNEGWYYFR 607

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           +     G+  G      ++D+     ++ +  K + EM      V+W   +      Q  
Sbjct: 608 SMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNV 667

Query: 403 EEAIEAFSQMVRND 416
           + A  A  ++++ D
Sbjct: 668 DLATYAAKEILKLD 681



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 5/201 (2%)

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+     M R     D  TYS ++K C    ++   +++H  I  + +     + + LI 
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y K    E+A+ +F ++   +VVSW +MI AYS      +A+ L   M  +G+ P   T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F +VL AC     + D  K   S + + G+  +    S ++D+  + G+L  AL     +
Sbjct: 389 FSSVLRACER---LYD-LKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444

Query: 585 PIKPTAPIWRPLFAACRCHSD 605
            +   + +W  + AA   HSD
Sbjct: 445 -MTGDSVVWNSIIAAFAQHSD 464


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/629 (33%), Positives = 336/629 (53%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    +E GR+ HA++ +     D F   +LV+MY K G +     + ++MP  D
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++G   N    +A    L++    + PN +T S++L  C    A D G+Q+H 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   +   L+ MY K   ++DA  VF+ +  R++I   A+I+G    G +++
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   +R++G+  N  T    L S ASL  +      HA  +K G      V   ++D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y     + +A +  +E   S   ++  + I    +    E AI+ F +M+R     D F
Sbjct: 448 SYWKCSCLSDANRVFEEC-SSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H+ ++K +F S+   G++L+  Y KCGS EDAE  FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               VVSW++MI   +Q+G  ++A+ LF +MV EGI P + T  +VL AC+H+GLV + +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM + +GI   E HYSCM+DLLGRAGKL+ A+  ++++P +  A IW  L  A R 
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D ++ +  ++++  L+P+ +  +V L+N YA AG+  +  + RKLMK   I KEP  S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           WIEV +K++ F   +KSH    ++Y KL +L   +   G   N           EKE  +
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLL 806

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSERLAV F L+S P        + L 
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLR 835



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 267/550 (48%), Gaps = 17/550 (3%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E +   +F + V+  C  +    LG + HA+   T    D FV  +LV MY   G +   
Sbjct: 97  EGVCCNEFALPVVLKCVPDA--RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 154

Query: 172 VAVVKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
             V  +     +  S N L++ Y KN     A   F ++    +QP  + +S ++  C  
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 214

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              I+ G+Q+HA  +++ Y      +NAL+ MY+K G ++ A  +FE +   +V+SW A+
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNAL 274

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G   +G   + + L+  M+  G+ PN +T +  L +C+      +G   H  +IK   
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              D++G  +VDMY+    + +A+K    M      +  NA I+G     + +EA+  F 
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR-DLILCNALISGCSHGGRHDEALSLFY 393

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           ++ +     +  T +++LK+ + L + +T  Q+H+  VK  F  + HV + LI++Y KC 
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
              DA RVF + ++ D+++  SMI A SQ      AI LF +M+ +G+ P      ++L+
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+     + G++V   ++K    + +    + +V    + G +E A +  S+LP +   
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV 572

Query: 591 PIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYA---EAGLQADAEE 645
             W  +      H   K A E   + + E ++P+    ++T++++      AGL  +A  
Sbjct: 573 S-WSAMIGGLAQHGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEA-- 625

Query: 646 QRKLMKMKEI 655
           +R    MKE+
Sbjct: 626 KRYFNSMKEM 635



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 164/331 (49%), Gaps = 5/331 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T S  L    +  A+  G  LHA  +K   L+  +  N L++ Y KC     A   F+ +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLA--SFRNHLISFYSKCRRPCCARRFFDEI 63

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
                +SW++++  +  +G     ++    MR +G+  NE+   V L      R   +G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGA 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA  +  G     FV  A+V MY G G + +A++   E     ++VSWN  ++ + +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +  +AI+ F +MV +     EF +S ++ AC+   ++    Q+H+ +V+  ++ +V   
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y K G  + A  +F ++  +DVVSWN++I     NG   +AI L  +M   G+ 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           P   T  ++L ACS +G    G+++   M+K
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/629 (33%), Positives = 336/629 (53%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    +E GR+ HA++ +     D F   +LV+MY K G +     + ++MP  D
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++G   N    +A    L++    + PN +T S++L  C    A D G+Q+H 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   +   L+ MY K   ++DA  VF+ +  R++I   A+I+G    G +++
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   +R++G+  N  T    L S ASL  +      HA  +K G      V   ++D
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y     + +A +  +E   S   ++  + I    +    E AI+ F +M+R     D F
Sbjct: 448 SYWKCSCLSDANRVFEEC-SSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H+ ++K +F S+   G++L+  Y KCGS EDAE  FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               VVSW++MI   +Q+G  ++A+ LF +MV EGI P + T  +VL AC+H+GLV + +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM + +GI   E HYSCM+DLLGRAGKL+ A+  ++++P +  A IW  L  A R 
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D ++ +  ++++  L+P+ +  +V L+N YA AG+  +  + RKLMK   I KEP  S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           WIEV +K++ F   +KSH    ++Y KL +L   +   G   N           EKE  +
Sbjct: 747 WIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVDLHDLDRSEKELLL 806

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSERLAV F L+S P        + L 
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLR 835



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 267/550 (48%), Gaps = 17/550 (3%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E +   +F + V+  C  +    LG + HA+   T    D FV  +LV MY   G +   
Sbjct: 97  EGVCCNEFALPVVLKCVPDA--RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 154

Query: 172 VAVVKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
             V  +     +  S N L++ Y KN     A   F ++    +QP  + +S ++  C  
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 214

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              I+ G+Q+HA  +++ Y      +NAL+ MY+K G ++ A  +FE +   +V+SW A+
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNAL 274

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G   +G   + + L+  M+  G+ PN +T +  L +C+      +G   H  +IK   
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANA 334

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              D++G  +VDMY+    + +A+K    M      +  NA I+G     + +EA+  F 
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHR-DLILCNALISGCSHGGRHDEALSLFY 393

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           ++ +     +  T +++LK+ + L + +T  Q+H+  VK  F  + HV + LI++Y KC 
Sbjct: 394 ELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCS 453

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
              DA RVF + ++ D+++  SMI A SQ      AI LF +M+ +G+ P      ++L+
Sbjct: 454 CLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+     + G++V   ++K    + +    + +V    + G +E A +  S+LP +   
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV 572

Query: 591 PIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYA---EAGLQADAEE 645
             W  +      H   K A E   + + E ++P+    ++T++++      AGL  +A  
Sbjct: 573 S-WSAMIGGLAQHGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEA-- 625

Query: 646 QRKLMKMKEI 655
           +R    MKE+
Sbjct: 626 KRYFNSMKEM 635



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 165/331 (49%), Gaps = 5/331 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T S  L    +  A+  G  LHA  +K   L+  +  N L++ Y KC     A  VF+ +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLA--SFRNHLISFYSKCRRPCCARRVFDEI 63

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
                +SW++++  +  +G     ++    MR +G+  NE+   V L      R   +G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGA 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA  +  G     FV  A+V MY G G + +A++   E     ++VSWN  ++ + +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +  +AI+ F +MV +     EF +S ++ AC+   ++    Q+H+ +V+  ++ +V   
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y K G  + A  +F ++  +DVVSWN++I     NG   +AI L  +M   G+ 
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           P   T  ++L ACS +G    G+++   M+K
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIK 331


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/628 (32%), Positives = 342/628 (54%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C  E  L +G+  H L+ K+    D F    L NMYAKC  +     V  +MP  D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++AGY++N +   A      +   +++P+  T  ++L    +L  I  GK++H 
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             M+  + S   +S AL+ MY KCG +E A  +F+G+++RNV+SW ++I+ + Q+ + ++
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M ++G+ P + +   AL +CA L +   G   H   ++ G+     V  +++ 
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY    E+  A     ++ +S + VSWNA I GF +N +  +A+  FSQM       D F
Sbjct: 381 MYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY S++ A + L      + IH  +++S  + NV V ++L++ Y KCG+   A  +F  +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +   V +WN+MI  Y  +G  + A+ LFE+M    I+P   TFL+V+SACSHSGLV+ G 
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F  M + Y I     HY  MVDLLGRAG+L  A  FI  +P+KP   ++  +  AC+ 
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++  AE  ++++ EL+PDD   +V L+N+Y  A +     + R  M  + + K PGCS
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ FFS + +H +  K+Y  L++L+  I++ G+           ++ KE  + 
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLS 739

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ FGL++  A       + L 
Sbjct: 740 THSEKLAISFGLLNTTAGTTIHVRKNLR 767



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 231/480 (48%), Gaps = 13/480 (2%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N +P   Y   + L       +L  CS  + L   R+   L+ K  +  + F    LV++
Sbjct: 29  NYIPANVYEHPAAL-------LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSL 78

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           + + G +     V + +        + +L G+AK +  D+A  FF+++   DV+P  Y +
Sbjct: 79  FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           + +L +CG  + +  GK++H   +K  +         L  MY KC  + +A  VF+ + +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+++SW  I+ G+ Q+G     L +V  M E+ + P+  T    L + ++LR   +G   
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   ++ G      + TA+VDMY+  G + E  +QL +     + VSWN+ I  + +N+ 
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSL-ETARQLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            +EA+  F +M+       + +    L AC+ L  L     IH   V+   + NV V +S
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y KC   + A  +F +L +  +VSWN+MI  ++QNGR   A+  F +M    ++P 
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIF 580
             T+++V++A +   +     K    +V    +       + +VD+  + G + IA LIF
Sbjct: 438 TFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 204/455 (44%), Gaps = 37/455 (8%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL   S    + +G+  H    ++       ++ +LV+MYAKCG +++   +   M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N ++  Y +N    +A   F K+    V+P   +    L  C  L  ++ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  +++L      +V N+L++MY KC  ++ A S+F  L  R ++SW A+I GF Q+G 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               L     MR   + P+ +T+   + + A L  +H     H  V++  +    FV TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY+  G I  A + + +M       +WNA I G+  +   + A+E F +M +     
Sbjct: 479 LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T+ S++ ACS                           S L+EA  KC  +   +  +
Sbjct: 538 NGVTFLSVISACS--------------------------HSGLVEAGLKC--FYMMKENY 569

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S   + D   + +M+    + GR  +A     +M V   +P  + + A+L AC     V 
Sbjct: 570 SIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPV---KPAVNVYGAMLGACQIHKNVN 624

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             +K  E +   + + P++  Y  ++  + RA  +
Sbjct: 625 FAEKAAERL---FELNPDDGGYHVLLANIYRAASM 656


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/683 (32%), Positives = 361/683 (52%), Gaps = 43/683 (6%)

Query: 26  VKPKKCNHRKTVEVKEPFASYS-------ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKG 78
           +K K  NH   V +     +YS       AC+LF++  +R   S + LI      + E G
Sbjct: 95  LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLI----AGLAENG 150

Query: 79  ISRNGYS-----TRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECL 133
           +  +G+           FPD F   G                       +L  C   + +
Sbjct: 151 LFLDGFEFFCEMQSQGIFPDQFAYSG-----------------------ILQICIGLDSI 187

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ELG   HA I         FV+ +L+NMYAK  +I+    V   M  +++ S N ++ G+
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGF 247

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             N L+  AF  FL++ G  V P+  T+  +    G L  +++ K++    ++L   S T
Sbjct: 248 TSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNT 307

Query: 254 AVSNALLTMYIKCGMMEDAESVFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            V  AL+ M  KCG +++A S+F    +  R    W A+I+G+ + G  EK L L   M 
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMC 367

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
           ++ I  + YT+     + A+L+   +G   HA+ IK G+ +    +  A+ + Y+  G +
Sbjct: 368 QNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSL 427

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            + +K    M +    +SW + +  + +  + ++AIE FS M     A ++FT+SS+L +
Sbjct: 428 EDVRKVFNRM-EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+ L  L   +Q+H  I K   + +  + S+L++ Y KCG   DA++VF++++ AD VSW
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            ++I  ++Q+G    A+ LF +MV  G+ P   TFL VL ACSH GLV++G + F+ M K
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
            YG++PE  HY+C+VDLL R G L  A+ FIS +P++P   +W+ L  ACR H ++++ E
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             +++IL    +++A YV LSN Y E+G   D    R +MK + + KEPGCSWI V   +
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTL 726

Query: 671 YRFFSQNKSHSEMPKVYEKLKQL 693
           ++F++ ++ H E  K+Y KL++L
Sbjct: 727 HKFYAGDQQHPEKDKIYAKLEEL 749


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 340/619 (54%), Gaps = 11/619 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE G+  H    +  +  D  V   L+ MYAKCG+ +    +   +   D+ + + ++A 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             +    ++A S F ++    ++PN  T  ++L  C  LS +  GK +H  T+K    S 
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
            +   AL++MY KCG    A + F  +  R++++W ++ING+ Q GD    + +   +R 
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             I+P+  T    + +CA L +   G   H  ++K G      V  A++DMY+  G +  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +   +   V+WN  IA + +N   +EAI +F QM   +   +  T+ S+L A +
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +       H+ I++  F SN  VG+SLI+ Y KCG    +E++F+++   D VSWN+
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNA 704

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           M+  Y+ +G   +AI LF  M    ++  + +F++VLSAC H GLV++G+K+F SM  +Y
Sbjct: 705 MLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKY 764

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            I P+  HY+CMVDLLGRAG  +  L FI  +P++P A +W  L  +CR HS++K+ E  
Sbjct: 765 HIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVA 824

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
              +++L+P + A +V LS++YA++G  ADA + R  M    + K PGCSW+E+ NK++ 
Sbjct: 825 LDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHA 884

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--------EKEDRVLY---HSERLAVG 721
           F   +KSH ++  ++     L++++E IG+  +        E+ED+ ++   HSERLA+ 
Sbjct: 885 FRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAIT 944

Query: 722 FGLISLPAKNKFECSRTLE 740
           F L++ P  +  +  + L 
Sbjct: 945 FALLNTPPGSTIQIVKNLR 963



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/520 (29%), Positives = 251/520 (48%), Gaps = 12/520 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +EL R  H  + +        V+  L+++Y+KCGD+     V  QM   D  S   ++AG
Sbjct: 246 IELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAG 303

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N  F +    F K+   +V+ N  +  +          +++GK++H   ++ +  S 
Sbjct: 304 YAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSD 363

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+  L+ MY KCG  E A+ +F GL  R++++W+AII    Q G  E+ L L   M+ 
Sbjct: 364 ILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQN 423

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             + PN  T    L +CA L    +G   H   +K  M      GTA+V MY+  G    
Sbjct: 424 QKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTA 483

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A      M  S   V+WN+ I G+ +      AI+ F ++  +    D  T   ++ AC+
Sbjct: 484 ALTTFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWN 491
           LL  L     IH  IVK  FES+ HV ++LI+ Y KCGS   AE +F++     D V+WN
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I AY QNG A++AI  F +M +E   P + TF++VL A ++    ++G   F + + +
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQ 661

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMA 609
            G L      + ++D+  + G+L  +    + +  K T   W  + +  A   H D  +A
Sbjct: 662 MGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-WNAMLSGYAVHGHGDRAIA 720

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            F   Q  ++  D  + +V++ +     GL    EE RK+
Sbjct: 721 LFSLMQESQVQIDSVS-FVSVLSACRHXGL---VEEGRKI 756



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/571 (25%), Positives = 263/571 (46%), Gaps = 7/571 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     VL  C+    L+ G  +H  I +  +  D F+ A LV+MY+K GD+K    V 
Sbjct: 128 DKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVF 187

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  D+ + N ++AG +++    +A  FF  +  + V+P+  +   +      LS I+
Sbjct: 188 DKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIE 247

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             + +H    +  +   +AVSN L+ +Y KCG ++ A  VF+ +V ++ +SW  ++ G+ 
Sbjct: 248 LCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYA 305

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G + + L L   M+   +  N+ +   A  + A   +   G   H   +++ +     
Sbjct: 306 HNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDIL 365

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V T ++ MY+  GE  E  KQL    +    V+W+A IA   +    EEA+  F +M   
Sbjct: 366 VATPLMVMYAKCGET-EKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T  SIL AC+ L  L   + IH   VK+  +S++  G++L+  Y KCG +  A
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAA 484

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
              F+++++ D+V+WNS+I  Y+Q G    AI +F K+ +  I P   T + V+ AC+  
Sbjct: 485 LTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALL 544

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G  +   +VK  G   +    + ++D+  + G L  A    +          W  
Sbjct: 545 NDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNV 603

Query: 596 LFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           + AA     H+   ++ F   ++    P+       L      A  +        +++M 
Sbjct: 604 IIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMG 663

Query: 654 EISKE-PGCSWIEVYNKIYRFFSQNKSHSEM 683
            +S    G S I++Y K  +     K  +EM
Sbjct: 664 FLSNTLVGNSLIDMYAKCGQLXYSEKLFNEM 694



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 198/433 (45%), Gaps = 7/433 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+    L+LG+  H    K  +  D     +LV+MYAKCG   + +    +M 
Sbjct: 433 LMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS 492

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI + N L+ GYA+      A   F KL    + P+  T   ++  C  L+ +D+G  
Sbjct: 493 SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTC 552

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
           +H   +KL + S   V NAL+ MY KCG +  AE +F      ++ ++W  II  + Q+G
Sbjct: 553 IHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNG 612

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ +     MR +   PN  TF   L + A L     G  FHA +I+ G      VG 
Sbjct: 613 HAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGN 672

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G++  ++K   EM     +VSWNA ++G+  +   + AI  FS M  +   
Sbjct: 673 SLIDMYAKCGQLXYSEKLFNEMDHK-DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731

Query: 419 CDEFTYSSILKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
            D  ++ S+L AC     +    +I HS   K   + ++   + +++   + G +++   
Sbjct: 732 IDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791

Query: 478 VFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHS 535
               +    D   W +++ +   +   +   +  + +V   + P N     VLS+  + S
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLV--KLEPRNPAHFVVLSSIYAQS 849

Query: 536 GLVQDGQKVFESM 548
           G   D  K    M
Sbjct: 850 GRWADAGKARSKM 862



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 218/475 (45%), Gaps = 45/475 (9%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA--LLTMYIKCGMMEDAES 274
           N+  Y  +L+ C  L+ +    Q+HAQ +   +    ++++   L +++ KC +   A S
Sbjct: 31  NYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARS 84

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+     + I W ++I  + +   Y + L +   M E G++P++YTFT  L +C    N
Sbjct: 85  VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALN 144

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G  FH ++ +RG+    F+G  +VDMYS +G++  A++   +M K    V+WNA IA
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR-DVVAWNAMIA 203

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G  +++   EA++ F  M          +  ++      L ++  C  IH  + +  F S
Sbjct: 204 GLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS 263

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            V  G  LI+ Y+KCG  + A RVF Q+   D VSW +M+  Y+ NG   + + LF+KM 
Sbjct: 264 AVSNG--LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMK 321

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE----------------------- 551
           +  +R    + ++   A + +  ++ G+++    +++                       
Sbjct: 322 LGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETE 381

Query: 552 ------YGILPEE-AHYSCMVDLLGRAGKLEIALIF---ISNLPIKPTAPIWRPLFAACR 601
                 +G+   +   +S ++  L + G  E AL     + N  +KP       +  AC 
Sbjct: 382 KAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACA 441

Query: 602 CHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
             S LK+ + I    ++ D D D +    L +MYA+ G    A      M  ++I
Sbjct: 442 DLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDI 496



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 189/396 (47%), Gaps = 9/396 (2%)

Query: 158 LVNMYA---KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           L+N+Y+   KC   +S   V    P       N ++  Y ++  +++A   +  +    +
Sbjct: 69  LINLYSLFHKCDLARS---VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGL 125

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+ YT++ +L  C     + EG   H +  +        +   L+ MY K G ++ A  
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+ + +R+V++W A+I G  Q  D  + +     M+  G++P+  +          L N
Sbjct: 186 VFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN 245

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +    H  V +R  +    V   ++D+YS  G++  A++   +M      VSW   +A
Sbjct: 246 IELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMA 302

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+  N    E +E F +M   +   ++ +  S   A +    L   ++IH   ++ + +S
Sbjct: 303 GYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS 362

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++ V + L+  Y KCG  E A+++F  L   D+V+W+++I A  Q G   +A+ LF++M 
Sbjct: 363 DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQ 422

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            + ++P   T +++L AC+   L++ G+ +    VK
Sbjct: 423 NQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVK 458


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/594 (36%), Positives = 349/594 (58%), Gaps = 10/594 (1%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            +LS C+  ECLE+GR+ H+ I K     + FV  +LV+MYAKCG ++      + +   D
Sbjct: 456  ILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRD 515

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
              S N ++ GY +    D+AF+ F +  LDGI   P+  + +++L+ C +L A+++G+Q+
Sbjct: 516  NVSWNAIIVGYVQEEDEDEAFNMFRRMILDGI--APDEVSLASILSGCANLQALEQGEQV 573

Query: 241  HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
            H   +K    +     ++L+ MY+KCG +E A  VF  +  R+V+S  AII G+ Q+ D 
Sbjct: 574  HCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DL 632

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-GDFVGTA 359
             + + L   M+ +G++P+E TF   L +C      ++G   H  + KRG+   GDF+G +
Sbjct: 633  VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVS 692

Query: 360  IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
            ++ MY       +A     E     S++ W A I+G  +N  +EEA++ + +M RN+A  
Sbjct: 693  LLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARP 752

Query: 420  DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            D+ T++S+L+ACS+L SL     IHS I     +S+   GS++++ Y KCG  + + +VF
Sbjct: 753  DQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVF 812

Query: 480  SQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
             ++ +  DV+SWNSMI  +++NG A  A+ +F++M    IRP + TFL VL+ACSH+G V
Sbjct: 813  EEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRV 872

Query: 539  QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             +G+++F+ MV  Y I+P   H +CM+DLLGR G L+ A  FI  L  +P A IW  L  
Sbjct: 873  SEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLG 932

Query: 599  ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
            ACR H D       +++++EL+P++++ YV LSN+YA +G   +    R+ M+ K + K 
Sbjct: 933  ACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKL 992

Query: 659  PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TDNEKED 709
            PGCSWI V  K   F + +K H    +++  LK L+  +++ G+   TD+  ED
Sbjct: 993  PGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 231/413 (55%), Gaps = 3/413 (0%)

Query: 143 ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
           + K  +  DQ    +++      G +     +  QMP  ++ + N +++G+ K     +A
Sbjct: 274 MQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEA 333

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
             FF  +    V+    T  ++L+   SL A++ G  +HAQ +K    S   V ++L+ M
Sbjct: 334 IDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINM 393

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KC  ME A+ VF+ L +RN++ W A++ G+ Q+G   K ++L   MR  G  P+E+T+
Sbjct: 394 YAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTY 453

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           T  L++CA L    MG   H+ +IK       FV   +VDMY+  G + EA++Q  E  +
Sbjct: 454 TSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF-EFIR 512

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
           +  +VSWNA I G+ + +  +EA   F +M+ +  A DE + +SIL  C+ L +L   EQ
Sbjct: 513 NRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQ 572

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H  +VKS  ++ ++ GSSLI+ Y KCG+ E A  VFS + +  VVS N++I  Y+QN  
Sbjct: 573 VHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL 632

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             +AI LF++M  EG+ P+  TF ++L AC+    +  G+++   ++++ G+L
Sbjct: 633 V-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQI-HCLIQKRGLL 683



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 253/513 (49%), Gaps = 7/513 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  +  E L  G   HA   K  +  + +V +SL+NMYAKC  +++   V   +   +
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L GYA+N    +    F ++ G    P+ +TY+++L+ C  L  ++ G+QLH+
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +     V N L+ MY KCG +E+A   FE +  R+ +SW AII G+ Q  D ++
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   M  DGI P+E +    L+ CA+L+    G   H  ++K G+    + G++++D
Sbjct: 535 AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G I EA + +     S S VS NA IAG+ +N    EAI+ F +M        E 
Sbjct: 595 MYVKCGAI-EAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEI 652

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T++S+L AC+    L    QIH  I K         +G SL+  Y       DA+ +FS+
Sbjct: 653 TFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSE 712

Query: 482 LT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                  + W ++I  ++QNG + +A+ L+++M     RP  +TF +VL ACS    + D
Sbjct: 713 FQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGD 772

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA-- 598
           G ++  S++   G+  +E   S +VD+  + G ++ ++     +  K     W  +    
Sbjct: 773 G-RMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGF 831

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           A   +++  +  F   +   + PDD      L+
Sbjct: 832 AKNGYAENALKIFDEMKHTRIRPDDVTFLGVLT 864



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 244/519 (47%), Gaps = 68/519 (13%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA   K        + +++V++YAKCG+++       Q+   DI + N +L+ Y++    
Sbjct: 104 HAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSL 163

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           +Q    F  L    V PN +TY+ +L+ C  L  ID GKQ+H   +K+ +   +    +L
Sbjct: 164 EQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSL 223

Query: 260 LTM-------------------------------YIKCGMMEDAESVFE-----GLV--- 280
           + M                               Y++ G+ E+A  VFE     GLV   
Sbjct: 224 IDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQ 283

Query: 281 ---------------------------QRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
                                        NV++W  +I+G  + G   + +     M + 
Sbjct: 284 VAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT 343

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+     T    L++ ASL   + G + HAQ IK+G+    +VG+++++MY+   E  EA
Sbjct: 344 GVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKC-EKMEA 402

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            K++ +     + V WNA + G+ +N    + ++ FS+M       DEFTY+SIL AC+ 
Sbjct: 403 AKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACAC 462

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L  L    Q+HS I+K  FE N+ V ++L++ Y KCG+ E+A + F  +   D VSWN++
Sbjct: 463 LECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAI 522

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y Q     +A  +F +M+++GI P   +  ++LS C++   ++ G++V   +VK  G
Sbjct: 523 IVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-G 581

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           +       S ++D+  + G +E A    S +P +    +
Sbjct: 582 LQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSM 620



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 213/422 (50%), Gaps = 13/422 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +LS C+  + LE G + H  + K+ +    +  +SL++MY KCG I++   V 
Sbjct: 550 DEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVF 609

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP   + S N ++AGYA+N L  +A   F ++    + P+  T++++L  C     ++
Sbjct: 610 SCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLN 668

Query: 236 EGKQLHAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIING 293
            G+Q+H    K   L     +  +LL MY+      DA+ +F E    ++ I WTAII+G
Sbjct: 669 LGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISG 728

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G  E+ L+L   M  +   P++ TF   L +C+ L +   G M H+ +   G+   
Sbjct: 729 HTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSD 788

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           +  G+A+VDMY+  G++  + +  +EMG     +SWN+ I GF +N   E A++ F +M 
Sbjct: 789 ELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMK 848

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSW 472
                 D+ T+  +L ACS    ++   +I   +V S K    +   + +I+   + G  
Sbjct: 849 HTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFL 908

Query: 473 EDAERVFSQLT-AADVVSWNSMIKAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAV 528
           ++AE    +L    + + W +++ A   +G   R R+A    EK++   + P NS+   +
Sbjct: 909 KEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAA---EKLI--ELEPENSSPYVL 963

Query: 529 LS 530
           LS
Sbjct: 964 LS 965



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/491 (24%), Positives = 212/491 (43%), Gaps = 87/491 (17%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K +HAQT+K  + SK  + +A++ +Y KCG +E A   F  L +R++++W ++++ + + 
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  E+ +     ++  G+ PN++T+ + L+SCA L +  +G   H  VIK G     F  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++DMYS  G + +A+K    +     +VSW A IAG+ +    EEA++ F  M +   
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+  + +++ AC  L                                   G  +DA  
Sbjct: 280 VPDQVAFVTVITACVGL-----------------------------------GRLDDACD 304

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F Q+   +VV+WN MI  + + G   +AI  F+ M   G++ T ST  +VLSA +    
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEA 364

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK---------- 587
           +  G  V    +K+ G+       S ++++  +  K+E A      L  +          
Sbjct: 365 LNYGLLVHAQAIKQ-GLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLG 423

Query: 588 ------------------------PTAPIWRPLFAACRCHSDLKMAE----FISKQILEL 619
                                   P    +  + +AC C   L+M      FI K   E 
Sbjct: 424 GYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEY 483

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
              +  V  TL +MYA+ G   +A +Q + ++ ++       SW    N I   + Q + 
Sbjct: 484 ---NLFVENTLVDMYAKCGALEEARQQFEFIRNRD-----NVSW----NAIIVGYVQEED 531

Query: 680 HSEMPKVYEKL 690
             E   ++ ++
Sbjct: 532 EDEAFNMFRRM 542



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
           T + IH++ +K  F S   +GS++++ Y KCG+ E A + F+QL   D+++WNS++  YS
Sbjct: 99  TSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGIL 555
           + G   + I  F  +   G+ P   T+  VLS+C+    +  G++V   ++K   E+   
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE----- 610
            E +    ++D+  + G L  A   I +  + P    W  + A    +  + + E     
Sbjct: 219 CEGS----LIDMYSKCGSLVDARK-IFDAVVDPDTVSWTAMIAG---YVQVGLPEEALKV 270

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           F   Q L L PD  A +VT+       G   DA
Sbjct: 271 FEDMQKLGLVPDQVA-FVTVITACVGLGRLDDA 302


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/594 (36%), Positives = 343/594 (57%), Gaps = 11/594 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+  E LE+GR+ H+ I K     + FV  +L++MYAK G +K      + M Y D
Sbjct: 324 ILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRD 383

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             S N ++ GY +  +   AFS F +  LDGI   P+  + +++L+ CG++  ++ G+Q 
Sbjct: 384 HISWNAIIVGYVQEEVEAGAFSLFRRMILDGI--VPDEVSLASILSACGNIKVLEAGQQF 441

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  ++KL   +     ++L+ MY KCG ++DA   +  + +R+V+S  A+I G+      
Sbjct: 442 HCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTK 501

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG-DFVGTA 359
           E  + L+  M+  G+ P+E TF   +  C       +G   H  ++KRG+  G +F+GT+
Sbjct: 502 ES-INLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTS 560

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ MY     + +A     E     S V W A I+G  +N+ ++ A+  + +M  N+ + 
Sbjct: 561 LLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISP 620

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D+ T+ ++L+AC+LL SL    +IHS I  + F+ +    S+L++ Y KCG  + + +VF
Sbjct: 621 DQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVF 680

Query: 480 SQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            +L T  DV+SWNSMI  +++NG A+ A+ +F++M    I P + TFL VL+ACSH+G V
Sbjct: 681 EELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWV 740

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G+++F+ MV  YGI P   HY+CMVDLLGR G L+ A  FI  L ++P A IW  L  
Sbjct: 741 YEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLG 800

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H D K  +  +K+++EL+P  ++ YV LSNMYA +G   +A   R+ M  K+I K 
Sbjct: 801 ACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKI 860

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL 712
           PGCSWI V  +   F + + SHS   ++ + LK L   I+D    +N  +D V+
Sbjct: 861 PGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKD----NNRFQDIVI 910



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 250/485 (51%), Gaps = 8/485 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLK 208
           DQ    +++N Y   G +     + +QMP    ++ + N +++G+AK A +++A +FF +
Sbjct: 148 DQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQ 207

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    V+ +  T +++L+   SL+A++ G  +HA  +K  + S   V+++L+ MY KC M
Sbjct: 208 MSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQM 267

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            +DA  VF+ + Q+N+I W A++  + Q+G     + L   M   GI P+E+T+T  L++
Sbjct: 268 PDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILST 327

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA      +G   H+ +IK+      FV  A++DMY+  G + EA K  + M      +S
Sbjct: 328 CACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHM-TYRDHIS 386

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I G+ + +    A   F +M+ +    DE + +SIL AC  +  L   +Q H   V
Sbjct: 387 WNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSV 446

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K   E+N+  GSSLI+ Y+KCG  +DA + +S +    VVS N++I  Y+     +++I 
Sbjct: 447 KLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK-NTKESIN 505

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           L  +M + G++P+  TF +++  C  S  V  G ++  ++VK   +   E   + ++ + 
Sbjct: 506 LLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMY 565

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAA---CRCHSDLKMAEFISKQILELDPDDAA 625
             + +L  A I  S      +  +W  L +      C SD+ +  +   +   + PD A 
Sbjct: 566 MDSQRLADANILFSEFSSLKSIVMWTALISGHIQNEC-SDVALNLYREMRDNNISPDQAT 624

Query: 626 VYVTL 630
               L
Sbjct: 625 FVTVL 629



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 243/513 (47%), Gaps = 7/513 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  +    L  G   HA   K       +V +SL+NMY KC        V   +   +
Sbjct: 223 VLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKN 282

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L  Y++N         FL +    + P+ +TY+++L+ C     ++ G+QLH+
Sbjct: 283 MIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHS 342

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K ++ S   V+NAL+ MY K G +++A   FE +  R+ ISW AII G+ Q      
Sbjct: 343 AIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAG 402

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L   M  DGI P+E +    L++C +++    G  FH   +K G+    F G++++D
Sbjct: 403 AFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLID 462

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G+I +A K    M +  S VS NA IAG+   + T+E+I    +M        E 
Sbjct: 463 MYSKCGDIKDAHKTYSSMPER-SVVSVNALIAGYAL-KNTKESINLLHEMQILGLKPSEI 520

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T++S++  C     +    QIH  IVK      +  +G+SL+  Y       DA  +FS+
Sbjct: 521 TFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSE 580

Query: 482 LTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            ++   +V W ++I  + QN  +  A+ L+ +M    I P  +TF+ VL AC+    + D
Sbjct: 581 FSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHD 640

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++  S++   G   +E   S +VD+  + G ++ ++     L  K     W  +    
Sbjct: 641 GREI-HSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGF 699

Query: 601 RCHSDLKMAEFISKQILE--LDPDDAAVYVTLS 631
             +   K A  +  ++ +  + PDD      L+
Sbjct: 700 AKNGYAKCALKVFDEMTQSCITPDDVTFLGVLT 732



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 160/607 (26%), Positives = 276/607 (45%), Gaps = 58/607 (9%)

Query: 118 QFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           QF   V LS C++ + L LGR  H+ + K+ +    F   +L+++YAKC  +     +  
Sbjct: 47  QFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFA 106

Query: 177 Q--MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
               P+L   S   L++GY +  L  +A   F K+    V P+     T+L         
Sbjct: 107 SAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVL--------- 156

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIIN 292
                                 NA    YI  G ++DA  +F+ +    RNV++W  +I+
Sbjct: 157 ----------------------NA----YISLGKLDDACQLFQQMPIPIRNVVAWNVMIS 190

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G  +   YE+ L     M + G+  +  T    L++ ASL   + G + HA  IK+G   
Sbjct: 191 GHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFES 250

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +V +++++MY G  ++ +  +Q+ +     + + WNA +  + +N      +E F  M
Sbjct: 251 SIYVASSLINMY-GKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDM 309

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +      DEFTY+SIL  C+    L    Q+HS I+K +F SN+ V ++LI+ Y K G+ 
Sbjct: 310 ISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGAL 369

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           ++A + F  +T  D +SWN++I  Y Q      A  LF +M+++GI P   +  ++LSAC
Sbjct: 370 KEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSAC 429

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
            +  +++ GQ+ F  +  + G+       S ++D+  + G ++ A    S++P +    +
Sbjct: 430 GNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSV 488

Query: 593 WRPLFAACRCHSDLKMAEFISK-QILELDPDD----AAVYVTLSNMYAEAGLQAD-AEEQ 646
              L A     +  +    + + QIL L P +    + + V   +     GLQ   A  +
Sbjct: 489 -NALIAGYALKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVK 547

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI-GHTDN 705
           R L+   E     G S + +Y    R    N   SE    +  LK ++     I GH  N
Sbjct: 548 RGLLCGSEF---LGTSLLGMYMDSQRLADANILFSE----FSSLKSIVMWTALISGHIQN 600

Query: 706 EKEDRVL 712
           E  D  L
Sbjct: 601 ECSDVAL 607



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 224/442 (50%), Gaps = 10/442 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +LS C   + LE G+++H L  K  +  + F  +SL++MY+KCGDIK      
Sbjct: 418 DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTY 477

Query: 176 KQMPYLDIASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             MP   + S N L+AGYA KN    ++ +   ++  + ++P+  T+++++ +C   + +
Sbjct: 478 SSMPERSVVSVNALIAGYALKNT--KESINLLHEMQILGLKPSEITFASLIDVCKGSAKV 535

Query: 235 DEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIIN 292
             G Q+H   +K   L  +  +  +LL MY+    + DA  +F      ++++ WTA+I+
Sbjct: 536 ILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G  Q+   +  L L   MR++ I P++ TF   L +CA L + H G   H+ +   G  L
Sbjct: 596 GHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDL 655

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            +   +A+VDMY+  G++  + +  +E+      +SWN+ I GF +N   + A++ F +M
Sbjct: 656 DELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEM 715

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGS 471
            ++    D+ T+  +L ACS    +    QI   +V     E  V   + +++   + G 
Sbjct: 716 TQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGF 775

Query: 472 WEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            ++AE    +L    + + W +++ A   +G  ++     +K++   + P +S+   +LS
Sbjct: 776 LKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLI--ELEPQSSSPYVLLS 833

Query: 531 AC-SHSGLVQDGQKVFESMVKE 551
              + SG   + + +  +M+K+
Sbjct: 834 NMYAASGNWDEARSLRRTMIKK 855



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 229/484 (47%), Gaps = 60/484 (12%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ +T++  L+ C  L  +  G+ +H+  +K    S +    AL+ +Y KC  +  A ++
Sbjct: 45  PDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTI 104

Query: 276 FEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           F        + +SWTA+I+G+ Q G   + L +   MR   + P++    VAL +     
Sbjct: 105 FASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQ----VALVT----- 154

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQ 392
                                     +++ Y  LG++ +A +  ++M     + V+WN  
Sbjct: 155 --------------------------VLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVM 188

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +    EEA+  F QM ++       T +S+L A + L +L     +H+  +K  F
Sbjct: 189 ISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGF 248

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           ES+++V SSLI  Y KC   +DA +VF  ++  +++ WN+M+  YSQNG     + LF  
Sbjct: 249 ESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLD 308

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY---GILPEEAHYSCMVDLLG 569
           M+  GI P   T+ ++LS C+    ++ G+++  +++K+     +    A    ++D+  
Sbjct: 309 MISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNA----LIDMYA 364

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF--ISKQILE-LDPDDAAV 626
           +AG L+ A     ++  +     W  +        +++   F    + IL+ + PD+   
Sbjct: 365 KAGALKEAGKHFEHMTYRDHIS-WNAIIVG-YVQEEVEAGAFSLFRRMILDGIVPDE--- 419

Query: 627 YVTLSNMYAEAG--LQADAEEQRKLMKMK---EISKEPGCSWIEVYNKIYRFFSQNKSHS 681
            V+L+++ +  G     +A +Q   + +K   E +   G S I++Y+K       +K++S
Sbjct: 420 -VSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYS 478

Query: 682 EMPK 685
            MP+
Sbjct: 479 SMPE 482



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 171/409 (41%), Gaps = 76/409 (18%)

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V  W   + G K H   E+ L+        G  P+++TF V L++CA L+N H+G   H+
Sbjct: 13  VRQWNWRVQGTK-HYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKT 402
            VIK G+    F   A++ +Y+    +  A+            +VSW A I+G+ +    
Sbjct: 72  CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
            EA+  F +M RN A  D+    ++L                                  
Sbjct: 132 HEALHIFDKM-RNSAVPDQVALVTVLN--------------------------------- 157

Query: 463 IEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             AY   G  +DA ++F Q+     +VV+WN MI  +++     +A+  F +M   G++ 
Sbjct: 158 --AYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215

Query: 521 TNSTFLAVLSACS-----------HSGLVQDGQK----VFESMVKEYGI--LPEEAH--- 560
           + ST  +VLSA +           H+  ++ G +    V  S++  YG   +P++A    
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275

Query: 561 ----------YSCMVDLLGRAGKL----EIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
                     ++ M+ +  + G L    E+ L  IS   I P    +  + + C C   L
Sbjct: 276 DAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMIS-CGIHPDEFTYTSILSTCACFEYL 334

Query: 607 KMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
           ++   +   I++     +  V   L +MYA+AG   +A +  + M  ++
Sbjct: 335 EVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRD 383


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 233/748 (31%), Positives = 378/748 (50%), Gaps = 88/748 (11%)

Query: 50  QLFNKSPKRAGLSTS-DLIFNGYMNIEEKGISRNGYSTRN-DSFPDGFID--DGCSNTVP 105
           +LF++ P R   S S   + +GY        S+NG+ +R+ ++F     D  DG  N  P
Sbjct: 95  KLFDEMPVRVKDSVSWTTMISGY--------SQNGFHSRSFETFSLMIRDTNDGGKNYDP 146

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
            +  S            V+  C       L  + HAL++K     +  +  S+V MY KC
Sbjct: 147 FSFTS------------VMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKC 194

Query: 166 GDI------------------KSMV-------------AVVKQMPYLDIASCNCLLAGYA 194
           GD+                   SM+              +  +MP  D  S N L++ ++
Sbjct: 195 GDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFS 254

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++    Q  + F+++      PN  TY ++L+ C S S +  G  LHA+ +++++     
Sbjct: 255 QHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLV 314

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
             N L+ MY KCG ++ A+ VF+ L + + ISW ++I G    G  E  L L   MR   
Sbjct: 315 FGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSS 374

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI---- 370
           +  +E+     L  C+    +  G + H   IK GM     VG AI+ MY+  G+     
Sbjct: 375 VVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKAD 434

Query: 371 -------------WEAK----KQLKEMGKSA---------SSVSWNAQIAGFFRNQKTEE 404
                        W A      +  ++GK+          + V+WN+ ++ + +N  +EE
Sbjct: 435 LVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEE 494

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
            ++ +  M  N    D  T+++ ++AC+ L  +    Q+ +   K     NV V +S++ 
Sbjct: 495 GLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVT 554

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y++CG  ++A+  F  +   D++SWN+M+ A++QNG   K I  FE M+    +P + +
Sbjct: 555 MYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHIS 614

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           +++VLS CSH GLV +G+  F+SM + +GI P   H+SCMVDLLGRAG LE A   I  +
Sbjct: 615 YVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGM 674

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P KP A +W  L  +CR H DL++AE  +K+++ELD + +  YV LSNMY+E+G   +  
Sbjct: 675 PFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVA 734

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-- 702
           + RKLMK+K I    GCSWIEV N+++ F     SH ++ +VY KL+++M+ IED G   
Sbjct: 735 DMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYI 794

Query: 703 -TDNEKEDRVLYHSERLAVGFGLISLPA 729
             ++       YHSE+LA  FGL++LP+
Sbjct: 795 TVESSVHRSKKYHSEKLAFAFGLLNLPS 822



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/503 (22%), Positives = 206/503 (40%), Gaps = 82/503 (16%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV------------- 284
           ++LHAQ +     S   + N LL MY  CG+  DA  VF+    RN+             
Sbjct: 28  RKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSS 87

Query: 285 --------------------ISWTAIINGFKQHGDYEKPLRLVCLMRED----GIDPNEY 320
                               +SWT +I+G+ Q+G + +      LM  D    G + + +
Sbjct: 88  SRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPF 147

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           +FT  + +C SL +S +    HA V K G  +   +  ++V MY   G++  A+    ++
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA---------------------- 418
            +  S   WN+ I G+ +     +A++ F++M   D                        
Sbjct: 208 ER-PSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266

Query: 419 ---CDE------FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
              C++       TY S+L AC+    L     +H+RI++ +   ++  G+ LI+ Y KC
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  + A+RVF  L   D +SWNS+I      G    A+ILF +M    +         +L
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTIL 386

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
             CS       G+ +    +K  G+       + ++ +  + G  + A +    +P++ T
Sbjct: 387 GVCSGPDYASTGELLHGYTIKS-GMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT 445

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRK 648
              W  +  A     D+  A    +   ++ P+ +   + ++ + Y + G    +EE  K
Sbjct: 446 IS-WTAMITAFSRSGDIGKA----RGYFDMMPERNIVTWNSMLSTYVQNGF---SEEGLK 497

Query: 649 L-MKMKEISKEPGCSWIEVYNKI 670
           L + M+    +P   WI     I
Sbjct: 498 LYVSMRSNGVQP--DWITFTTSI 518



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 142/325 (43%), Gaps = 71/325 (21%)

Query: 322 FTVALASCA-SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG------------ 368
           F  A   C+ + ++ H+    HAQ+I  G+    F+   ++ MYS  G            
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 369 -------------------EIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEA 408
                               + +A+K   EM  +   SVSW   I+G+ +N     + E 
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 409 FSQMVR--NDAA--CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           FS M+R  ND     D F+++S++KAC  L       Q+H+ + K  F     + +S++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 465 AYNKCGSWEDAE-------------------------------RVFSQLTAADVVSWNSM 493
            Y KCG  + AE                               ++F+++   D VSWN++
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EY 552
           I  +SQ+G   + + +F +M  +G  P   T+ +VLSAC+ +  ++ G  +   +++ E+
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIA 577
            +  +    + ++D+  + G L++A
Sbjct: 310 SL--DLVFGNGLIDMYAKCGCLDLA 332


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/577 (35%), Positives = 324/577 (56%), Gaps = 2/577 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    +  G+  H  + K+    D  V +S V MYAKC   +  + +  +MP  D
Sbjct: 304 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 363

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +AS N +++ Y ++   ++A   F ++     +P+  T +T+++ C  L  ++ GK++H 
Sbjct: 364 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 423

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + ++  +     VS+AL+ MY KCG +E A+ VFE + ++NV+SW ++I G+   GD + 
Sbjct: 424 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 483

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   M E+GI P   T +  L +C+   N  +G   H  +I+  +    FV ++++D
Sbjct: 484 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 543

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G I  A+   + M K+ + VSWN  I+G+ +     EA+  F+ M +     D  
Sbjct: 544 LYFKCGNIGSAENVFQNMPKT-NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAI 602

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S+L ACS L  L   ++IH+ I++SK E N  V  +L++ Y KCG+ ++A  +F+QL
Sbjct: 603 TFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL 662

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSW SMI AY  +G+A +A+ LFEKM     +P   TFLA+LSACSH+GLV +G 
Sbjct: 663 PERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGC 722

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLFAACR 601
             F  M+ EYG  P   HYSC++DLLGR G+L  A   +   P I+    +   LF+AC 
Sbjct: 723 YYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACH 782

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H  L + E I + ++E DPDD + Y+ LSNMYA      +  + R  +K   + K PGC
Sbjct: 783 LHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGC 842

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           SWIEV  +I+ F  ++KSH +   +YE +  L   +E
Sbjct: 843 SWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVE 879



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 254/503 (50%), Gaps = 11/503 (2%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY-LDIASCNCLLAGY 193
           LG+  H  I    +  +  +  SL+N+Y  C   +S   V + +   LDI   N L+A  
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272

Query: 194 AKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            KN +F +    F +L     ++P+ +TY ++L  C  L  +  GK +H   +K  +   
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V ++ + MY KC + EDA  +F+ + +R+V SW  +I+ + Q G  EK L L   M+ 
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G  P+  T T  ++SCA L +   G   H ++++ G AL  FV +A+VDMY   G + E
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL-E 451

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             K++ E  +  + VSWN+ IAG+     ++  IE F +M          T SSIL ACS
Sbjct: 452 MAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACS 511

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              +L   + IH  I++++ E+++ V SSLI+ Y KCG+   AE VF  +   +VVSWN 
Sbjct: 512 RSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNV 571

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y + G   +A+++F  M   G++P   TF +VL ACS   +++ G+++  + + E 
Sbjct: 572 MISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI-HNFIIES 630

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----LKM 608
            +   E     ++D+  + G ++ AL   + LP +     W  + AA   H      LK+
Sbjct: 631 KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS-WTSMIAAYGSHGQAFEALKL 689

Query: 609 AEFISKQILELDPDDAAVYVTLS 631
            E + +   +  PD       LS
Sbjct: 690 FEKMQQS--DAKPDKVTFLAILS 710



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 190/367 (51%), Gaps = 2/367 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+S C+R   LE G+  H  + ++    D FV+++LV+MY KCG ++    V 
Sbjct: 398 DSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVF 457

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           +Q+   ++ S N ++AGY+           F ++D   ++P   T S++L  C     + 
Sbjct: 458 EQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQ 517

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H   ++ +  +   V+++L+ +Y KCG +  AE+VF+ + + NV+SW  +I+G+ 
Sbjct: 518 LGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYV 577

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G Y + L +   MR+ G+ P+  TFT  L +C+ L     G   H  +I+  + + + 
Sbjct: 578 KVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEV 637

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++DMY+  G + EA     ++ +    VSW + IA +  + +  EA++ F +M ++
Sbjct: 638 VMGALLDMYAKCGAVDEALHIFNQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKMQQS 696

Query: 416 DAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           DA  D+ T+ +IL ACS    +   C   +  I +  F+  V   S LI+   + G   +
Sbjct: 697 DAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLRE 756

Query: 475 AERVFSQ 481
           A  +  +
Sbjct: 757 AYEILQR 763



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 133/255 (52%), Gaps = 2/255 (0%)

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
           +A  +  S     +G + H +++  G+     +  +++++Y        AK   + +   
Sbjct: 200 LARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 259

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-AACDEFTYSSILKACSLLPSLATCEQ 442
                WN  +A   +N    E +E F +++       D FTY S+LKACS L  +   + 
Sbjct: 260 LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 319

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H+ ++KS F  +V V SS +  Y KC  +EDA ++F ++   DV SWN++I  Y Q+G+
Sbjct: 320 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 379

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             KA+ LFE+M V G +P + T   V+S+C+    ++ G+++   +V+  G   +    S
Sbjct: 380 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS-GFALDGFVSS 438

Query: 563 CMVDLLGRAGKLEIA 577
            +VD+ G+ G LE+A
Sbjct: 439 ALVDMYGKCGCLEMA 453


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/576 (34%), Positives = 333/576 (57%), Gaps = 2/576 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   E L  G + H  + K     D FV  SL++MY++CGD+ +   V   + Y D
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +++ Y K    ++A   FL L G  ++PN YT++ +++ C     ++  + LH 
Sbjct: 245 VRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHG 304

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K     + +V NA++++Y+K GM+E+AE  F G+ +RN++SWTA+++G+ ++G+ +K
Sbjct: 305 MCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKK 364

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     + E G+  +   F   L  C+  +N  +G   H  V+K G      VGTA++D
Sbjct: 365 ALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALID 424

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+   ++  A+     +    + VS+NA ++G+      E+A+  FSQ+   D   D  
Sbjct: 425 LYAKCRKLRSARLVFHSL-LDKNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPDSV 482

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++ +L   +    L   + +H+ I+K+ FE+N  VG+++I  Y KCGS  DA ++F  +
Sbjct: 483 TFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSM 542

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D +SWN++I AY+ +G+ RKA+ILFE+M  E   P   T L+VL ACS+SGL+++G 
Sbjct: 543 NYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGF 602

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
            +F  M  +YGI PE  H++CMVDLLGRAG L  A+ FI+  P   +  +WR L   C+ 
Sbjct: 603 CLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKL 662

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H DL   +  SK +L+L P++A  Y+ +SN+YA  G+  +A   R +M   ++SKE G S
Sbjct: 663 HGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSS 722

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           WIE+ NK+++F + +K H E  ++Y KL  L  +++
Sbjct: 723 WIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMK 758



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 2/418 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LG+  HA + K     D F   +LVN+Y K   +    +V  +M   +  +   L+ G
Sbjct: 94  LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + +    +  F    ++  +  + N +T S +L  C SL  +  G+Q+H   +K  +   
Sbjct: 154 HLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDED 213

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V  +L++MY +CG +  AE V+  L  ++V     +I+ + + G  EK + +   +  
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G++PN+YTFT  +++C    +  +  + H   IK G      VG AIV +Y   G + E
Sbjct: 274 SGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEE 333

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+K    MG+  + VSW A ++G+ +N   ++A+E FSQ++      D   ++++L  CS
Sbjct: 334 AEKSFCGMGER-NLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCS 392

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              +L    QIH  +VK  +  +V VG++LI+ Y KC     A  VF  L   ++VS+N+
Sbjct: 393 ECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNA 452

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           ++  Y        A+ LF ++ +  I+P + TF  +LS  +    +  G+ +   ++K
Sbjct: 453 ILSGYI-GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIK 509


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/611 (31%), Positives = 330/611 (54%), Gaps = 12/611 (1%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C +   L  GR  H  + +T       +   L+ MY  CG    +  V  +M   ++ S 
Sbjct: 97  CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSW 156

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++ YAKN   ++A   F  +    ++PN   Y ++L  C   S ++ GKQ+H+  ++
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR 216

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            Q  +   V  A+  MY++CG +E A+ VF+G+  +N ++WT ++ G+ Q    E  L L
Sbjct: 217 AQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G++ +E+ F++ L  C  L +  MG   H+ ++K G      VGT +VD Y  
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVK 336

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G+I  A +    + +  + VSW+A I+GF ++ + E+ I+ F+ +       + F Y+S
Sbjct: 337 CGDIESAYRSFGRISE-PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           + +AC+   +L    Q H   +K    S ++  S+++  Y+KCG  + A R F  +   D
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+W ++I  Y+ +G A +A+  F +M   G+RP   TF+AVL+ACSHSGLV + ++   
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM ++YG+ P   HY CM+D   RAG L+ AL  I+ +P +P A  W+ L   C  H DL
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDL 575

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           K+ +  ++ +  LDP D A Y+ L N+Y+  G   +A   RKLM  +E+ KE  CSWI V
Sbjct: 576 KLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISV 635

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQ-----------LMQQIEDIGHTDNEKEDRVLYHS 715
             +++RF   ++ H +   +Y KL++           L+ + +D+  + + +++++L HS
Sbjct: 636 KGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHS 695

Query: 716 ERLAVGFGLIS 726
           E+LA+ FGLIS
Sbjct: 696 EKLAIAFGLIS 706



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 225/461 (48%), Gaps = 6/461 (1%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N  L   +K     +A  F  ++D  DV    ++Y  +   CG L ++ +G+ +H +  +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                  ++ N LL MY  CG   D + VF+ ++ +N++SW  +I+ + ++G+ EK +RL
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M+  GI PN   +   L SC       +G   H+ VI+  +     V TAI +MY  
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  AK     M  + ++V+W   + G+ + +K E A+E F++M       DEF +S 
Sbjct: 236 CGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +LK C  L       QIHS IVK   ES V VG+ L++ Y KCG  E A R F +++  +
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSW+++I  +SQ+GR    I +F  +  EG+   +  + +V  AC+    +  G +   
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
             +K  G++      S MV +  + G+L+ A     ++  +P A  W  + +    H + 
Sbjct: 415 DAIKR-GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGNA 472

Query: 607 --KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
              +  F   Q   + P +A  ++ +    + +GL A+A++
Sbjct: 473 AEALGFFRRMQSYGVRP-NAVTFIAVLTACSHSGLVAEAKQ 512



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 189/376 (50%), Gaps = 3/376 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     LELG++ H+ + +  +  +  V  ++ NMY +CG ++    V   M  
Sbjct: 192 MSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            +  +   L+ GY +    + A   F ++    V+ + + +S +L +C  L   D G+Q+
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQI 311

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  +KL   S+ +V   L+  Y+KCG +E A   F  + + N +SW+A+I+GF Q G  
Sbjct: 312 HSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  +++   +R +G+  N + +T    +CA+  N +MG   H   IKRG+    +  +A+
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V MYS  G +  A++  + + +   +V+W A I+G+  +    EA+  F +M       +
Sbjct: 432 VTMYSKCGRLDYARRAFESIDE-PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPN 490

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVF 479
             T+ ++L ACS    +A  +Q    + +    +  +     +I+ Y++ G  ++A  + 
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELI 550

Query: 480 SQLT-AADVVSWNSMI 494
           +++    D +SW S++
Sbjct: 551 NRMPFEPDAMSWKSLL 566



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 110 SLESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           ++E +   +FV   VL  C   E  ++GR+ H+ I K     +  V   LV+ Y KCGDI
Sbjct: 281 AMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDI 340

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           +S      ++   +  S + L++G++++   +     F  L    V  N + Y+++   C
Sbjct: 341 ESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC 400

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            + + ++ G Q H   +K   +S     +A++TMY KCG ++ A   FE + + + ++WT
Sbjct: 401 AAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWT 460

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           AII+G+  HG+  + L     M+  G+ PN  TF   L +C     SH G +  A+    
Sbjct: 461 AIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC-----SHSGLVAEAKQYLG 515

Query: 349 GMALGDFVGTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            M+    V   I      +D YS  G + EA + +  M     ++SW + + G
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 86/189 (45%), Gaps = 4/189 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +L+      V   C+ +  L +G + H    K  +    +  +++V MY+KCG +     
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             + +   D  +   +++GYA +    +A  FF ++    V+PN  T+  +L  C     
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506

Query: 234 IDEGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAI 290
           + E KQ +  +M   Y  K  +   + ++  Y + G++++A  +   +  + + +SW ++
Sbjct: 507 VAEAKQ-YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSL 565

Query: 291 INGFKQHGD 299
           + G   H D
Sbjct: 566 LGGCWAHCD 574


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/532 (37%), Positives = 316/532 (59%), Gaps = 17/532 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TYS ++  C S  A+ EG  +        +     + N L+ MY+K  ++ DA  +F+ +
Sbjct: 15  TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQM 74

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            QRNVISWT +I+ + +   ++K L L+ LM  DG+ PN YT++  L +C  + +  M  
Sbjct: 75  PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDVRM-- 132

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +IK G+    +V +A++D+++ LGE  +A     EM  +  ++ WN+ I GF +N
Sbjct: 133 -LHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQN 190

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +++ A+E F +M R     ++ T +S+L+AC+ L  L    Q H  IVK  ++ ++ + 
Sbjct: 191 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 248

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y KCGS EDA RVF+Q+   DV++W++MI   +QNG +++A+ LFE M   G +
Sbjct: 249 NALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTK 308

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T + VL ACSH+GL++DG   F SM K YGI P   HY CM+DLLG+AGKL+ A+ 
Sbjct: 309 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVK 368

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            ++ +  +P A  WR L  ACR   ++ +AE+ +K+++ LDP+DA  Y  LSN+YA +  
Sbjct: 369 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQK 428

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
               EE RK M+   I KEPGCSWIEV  +I+ F   ++SH ++ +V +KL QL+ ++  
Sbjct: 429 WDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKKLNQLIHRLIG 488

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           IG+              + ED + +HSE+LA+ FGL++LP++      + L 
Sbjct: 489 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKNLR 540



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 191/411 (46%), Gaps = 18/411 (4%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+   L+NMY K   +     +  QMP  ++ S   +++ Y+K  +  +A    + +   
Sbjct: 49  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V+PN YTYS++L  C  +S +   + LH   +K    S   V +AL+ ++ K G  EDA
Sbjct: 109 GVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDA 165

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
            SVF+ +V  + I W +II GF Q+   +  L L   M+  G    + T T  L +C  L
Sbjct: 166 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 225

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G   H  ++K    L   +  A+VDMY   G + +A++   +M K    ++W+  
Sbjct: 226 ALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDARRVFNQM-KERDVITWSTM 282

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +N  ++EA++ F  M  +    +  T   +L ACS    L      + R +K  +
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACS-HAGLLEDGWYYFRSMKKLY 341

Query: 453 ESNV---HVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAII 508
             N    H G  +I+   K G  +DA ++ +++    D V+W +++ A     R ++ ++
Sbjct: 342 GINPGREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC----RVQRNMV 396

Query: 509 LFEKMV--VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           L E     V  + P ++    VLS    +    D  +     +++ GI  E
Sbjct: 397 LAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKE 447



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 135/272 (49%), Gaps = 14/272 (5%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  H  I K  +  D +V ++L++++AK G+ +  ++V  +M   D    N ++ G+A+N
Sbjct: 131 RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 190

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           +  D A   F ++          T +++L  C  L+ ++ G Q H   +K  Y     ++
Sbjct: 191 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 248

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+ MY KCG +EDA  VF  + +R+VI+W+ +I+G  Q+G  ++ L+L  LM+  G  
Sbjct: 249 NALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTK 308

Query: 317 PNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           PN  T    L +C     SH G      Y F +     G+  G      ++D+    G++
Sbjct: 309 PNYITIVGVLFAC-----SHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKL 363

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
            +A K L EM     +V+W   + G  R Q+ 
Sbjct: 364 DDAVKLLNEMECEPDAVTWRT-LLGACRVQRN 394



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 139/269 (51%), Gaps = 9/269 (3%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           ++  G+  +  T++  +  C S R  H G +    +   G     F+   +++MY     
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A +   +M +  + +SW   I+ + + +  ++A+E    M+R+    + +TYSS+L+
Sbjct: 64  LNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR 122

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+    ++    +H  I+K   ES+V+V S+LI+ + K G  EDA  VF ++   D + 
Sbjct: 123 ACN---GMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 179

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNS+I  ++QN R+  A+ LF++M   G     +T  +VL AC+   L++ G +    +V
Sbjct: 180 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 239

Query: 550 K-EYGILPEEAHYSCMVDLLGRAGKLEIA 577
           K +  ++   A    +VD+  + G LE A
Sbjct: 240 KYDQDLILNNA----LVDMYCKCGSLEDA 264


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 346/596 (58%), Gaps = 25/596 (4%)

Query: 154 VTASLVNMYAK---CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK-L 209
           V   L++M+ K     D++S   V  +M   ++ +   ++   A+    D+A   FL+ L
Sbjct: 194 VGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEML 253

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
                 P+ +T + ++++C  +  +  GK+LH+  ++   +    V  +L+ MY KCG++
Sbjct: 254 VSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLV 313

Query: 270 EDAESVFEGLVQRNVISWTAIINGF-KQHGDYEK-PLRLVC-LMREDGIDPNEYTFTVAL 326
           ++A  VF+G+ + NV+SWTA++NG+ +  G YE+  +R+   ++ + G+ PN +TF+  L
Sbjct: 314 QEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVL 373

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK---QLKEMGKS 383
            +CASL +   G   H Q IK G++  D VG  +V +Y+  G +  A+K    L E    
Sbjct: 374 KACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLV 433

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
           + +V  +  +  F  N  +E+ ++   + V   +    FTY+S+L   + + ++   EQI
Sbjct: 434 SETVVDDTNVKDF--NLNSEQDLDREVEYV--GSGVSSFTYASLLSGAACIGTIGKGEQI 489

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H+ +VK  F +++ V ++LI  Y+KCG+ E A +VF+ +   +V++W S+I  ++++G A
Sbjct: 490 HAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFA 549

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
            KA+ LF  M+  G++P + T++AVLSACSH GL+ +  K F SM   +GI+P   HY+C
Sbjct: 550 SKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYAC 609

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
           MVDLLGR+G L  A+ FI+++P    A +WR    +CR H + K+ E  +K ILE +P D
Sbjct: 610 MVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHD 669

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
            A Y+ LSN+YA  G   D    RK MK K+I+KE G SWIEV N++++F   +  H + 
Sbjct: 670 PATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKA 729

Query: 684 PKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
            ++YEKL +L  +I+++G+            D +KE  +  HSE+LAV F LIS P
Sbjct: 730 QQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTP 785



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 228/469 (48%), Gaps = 17/469 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM--PY 180
           +L  C R +   LG+  H  +T + +  D  +  SL+ +Y+K  D  +  ++ + M    
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQPNHYTYSTMLAICGSLSAIDEG 237
            D+ S + +++ +A N    +A   F +L   DG  V PN Y ++ ++  C        G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDG--VYPNEYCFTAVIRACLKGGFFKTG 175

Query: 238 KQLHAQTMKLQYL-SKTAVSNALLTMYIK-CGM--MEDAESVFEGLVQRNVISWTAIING 293
             L    +K  Y  S   V   L+ M++K C +  +E A  VF+ + ++NV++WT +I  
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235

Query: 294 FKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
             Q+G  ++ + L   ++   G  P+ +T T  ++ CA ++   +G   H+ VI+ G+ L
Sbjct: 236 LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVL 295

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK--TEEAIEAFS 410
              VG ++VDMY+  G + EA+K    M +  + +SW A + G+ R       EA+  FS
Sbjct: 296 DLCVGCSLVDMYAKCGLVQEARKVFDGM-REHNVMSWTALVNGYVRGGGGYEREAMRMFS 354

Query: 411 QM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            M ++   A + FT+S +LKAC+ LP     EQ+H + +K    +   VG+ L+  Y K 
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKS 414

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A + F  L   ++VS   +     ++        L  ++   G   ++ T+ ++L
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLL 474

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           S  +  G +  G+++  +MV + G   + +  + ++ +  + G  E AL
Sbjct: 475 SGAACIGTIGKGEQI-HAMVVKIGFRTDLSVNNALISMYSKCGNKEAAL 522



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 18/327 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  ++S C+  + L LG+  H+ + ++ +  D  V  SLV+MYAKCG ++    V 
Sbjct: 261 DRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVF 320

Query: 176 KQMPYLDIASCNCLLAGYAK--NALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSL 231
             M   ++ S   L+ GY +       +A   F  + L G  V PN +T+S +L  C SL
Sbjct: 321 DGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQG-GVAPNCFTFSGVLKACASL 379

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
              D G+Q+H QT+KL   +   V N L+++Y K G ME A   F+ L ++N++S T + 
Sbjct: 380 PDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVD 439

Query: 292 N------GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           +            D ++ +  V      G   + +T+   L+  A +     G   HA V
Sbjct: 440 DTNVKDFNLNSEQDLDREVEYV------GSGVSSFTYASLLSGAACIGTIGKGEQIHAMV 493

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           +K G      V  A++ MYS  G    A +   +M +  + ++W + I GF ++    +A
Sbjct: 494 VKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDM-EDCNVITWTSIINGFAKHGFASKA 552

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACS 432
           +E F  M+      ++ TY ++L ACS
Sbjct: 553 LELFYNMLETGVKPNDVTYIAVLSACS 579



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 191/384 (49%), Gaps = 17/384 (4%)

Query: 209 LDGIDVQPNH----YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
           L+  D +  H     T S +L  C        GK LH +         T + N+L+T+Y 
Sbjct: 39  LNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYS 98

Query: 265 KCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
           K      A S+F+ +   +R+V+S+++II+ F  + +  K + +   L+ +DG+ PNEY 
Sbjct: 99  KSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYC 158

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY---SGLGEIWEAKKQL 377
           FT  + +C        G      V+K G       VG  ++DM+     L ++  A+K  
Sbjct: 159 FTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVF 218

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPS 436
            +M +  + V+W   I    +    +EAI+ F +M V +    D FT + ++  C+ +  
Sbjct: 219 DKM-REKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQF 277

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L+  +++HS +++S    ++ VG SL++ Y KCG  ++A +VF  +   +V+SW +++  
Sbjct: 278 LSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNG 337

Query: 497 YSQNGRA--RKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           Y + G    R+A+ +F  M+++ G+ P   TF  VL AC+       G++V    +K  G
Sbjct: 338 YVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIK-LG 396

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIA 577
           +   +   + +V +  ++G++E A
Sbjct: 397 LSAIDCVGNGLVSVYAKSGRMESA 420



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + HA++ K     D  V  +L++MY+KCG+ ++ + V   M   ++ +   ++ G+AK
Sbjct: 486 GEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAK 545

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           +    +A   F  +    V+PN  TY  +L+ C  +  IDE  + H  +M+
Sbjct: 546 HGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK-HFTSMR 595


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/577 (35%), Positives = 324/577 (56%), Gaps = 2/577 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    +  G+  H  + K+    D  V +S V MYAKC   +  + +  +MP  D
Sbjct: 112 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 171

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +AS N +++ Y ++   ++A   F ++     +P+  T +T+++ C  L  ++ GK++H 
Sbjct: 172 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 231

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + ++  +     VS+AL+ MY KCG +E A+ VFE + ++NV+SW ++I G+   GD + 
Sbjct: 232 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 291

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   M E+GI P   T +  L +C+   N  +G   H  +I+  +    FV ++++D
Sbjct: 292 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 351

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G I  A+   + M K+ + VSWN  I+G+ +     EA+  F+ M +     D  
Sbjct: 352 LYFKCGNIGSAENVFQNMPKT-NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAI 410

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S+L ACS L  L   ++IH+ I++SK E N  V  +L++ Y KCG+ ++A  +F+QL
Sbjct: 411 TFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL 470

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSW SMI AY  +G+A +A+ LFEKM     +P   TFLA+LSACSH+GLV +G 
Sbjct: 471 PERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGC 530

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLFAACR 601
             F  M+ EYG  P   HYSC++DLLGR G+L  A   +   P I+    +   LF+AC 
Sbjct: 531 YYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACH 590

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H  L + E I + ++E DPDD + Y+ LSNMYA      +  + R  +K   + K PGC
Sbjct: 591 LHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGC 650

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           SWIEV  +I+ F  ++KSH +   +YE +  L   +E
Sbjct: 651 SWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVE 687



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/523 (30%), Positives = 263/523 (50%), Gaps = 11/523 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   ++ +L  C   + L+ G+  H  I    +  +  +  SL+N+Y  C   +S   V
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 175 VKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLS 232
            + +   LDI   N L+A   KN +F +    F +L     ++P+ +TY ++L  C  L 
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            +  GK +H   +K  +     V ++ + MY KC + EDA  +F+ + +R+V SW  +I+
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + Q G  EK L L   M+  G  P+  T T  ++SCA L +   G   H ++++ G AL
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FV +A+VDMY   G + E  K++ E  +  + VSWN+ IAG+     ++  IE F +M
Sbjct: 241 DGFVSSALVDMYGKCGCL-EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRM 299

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                     T SSIL ACS   +L   + IH  I++++ E+++ V SSLI+ Y KCG+ 
Sbjct: 300 DEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNI 359

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             AE VF  +   +VVSWN MI  Y + G   +A+++F  M   G++P   TF +VL AC
Sbjct: 360 GSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 419

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S   +++ G+++  + + E  +   E     ++D+  + G ++ AL   + LP +     
Sbjct: 420 SQLAVLEKGKEI-HNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVS- 477

Query: 593 WRPLFAACRCHSD----LKMAEFISKQILELDPDDAAVYVTLS 631
           W  + AA   H      LK+ E + +   +  PD       LS
Sbjct: 478 WTSMIAAYGSHGQAFEALKLFEKMQQS--DAKPDKVTFLAILS 518



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 190/367 (51%), Gaps = 2/367 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+S C+R   LE G+  H  + ++    D FV+++LV+MY KCG ++    V 
Sbjct: 206 DSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVF 265

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           +Q+   ++ S N ++AGY+           F ++D   ++P   T S++L  C     + 
Sbjct: 266 EQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQ 325

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H   ++ +  +   V+++L+ +Y KCG +  AE+VF+ + + NV+SW  +I+G+ 
Sbjct: 326 LGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYV 385

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G Y + L +   MR+ G+ P+  TFT  L +C+ L     G   H  +I+  + + + 
Sbjct: 386 KVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEV 445

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++DMY+  G + EA     ++ +    VSW + IA +  + +  EA++ F +M ++
Sbjct: 446 VMGALLDMYAKCGAVDEALHIFNQLPER-DFVSWTSMIAAYGSHGQAFEALKLFEKMQQS 504

Query: 416 DAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           DA  D+ T+ +IL ACS    +   C   +  I +  F+  V   S LI+   + G   +
Sbjct: 505 DAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLRE 564

Query: 475 AERVFSQ 481
           A  +  +
Sbjct: 565 AYEILQR 571


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/614 (33%), Positives = 330/614 (53%), Gaps = 13/614 (2%)

Query: 137  RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
            +R H  + K        V  SL+  Y K G++ S   +  ++   D+ S N +++G   N
Sbjct: 573  KRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMN 632

Query: 197  ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                 A  FF+++  + V  +  T    +A C ++ ++  G+ LH Q +K  +  +   +
Sbjct: 633  GFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFN 692

Query: 257  NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            N LL MY KCG + DA   FE + Q+ V+SWT++I  + + G Y+  +RL   M   G+ 
Sbjct: 693  NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752

Query: 317  PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            P+ Y+ T  L +CA   +   G   H  + K  MAL   V  A++DMY+  G + EA   
Sbjct: 753  PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 377  LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              ++      VSWN  I G+ +N    EA++ F++M + ++  D  T + +L AC  L +
Sbjct: 813  FSQI-PVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAA 870

Query: 437  LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
            L     IH  I+++ + S +HV ++LI+ Y KCGS   A  +F  +   D+++W  MI  
Sbjct: 871  LEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG 930

Query: 497  YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
               +G   +AI  F+KM + GI+P   TF ++L ACSHSGL+ +G   F SM+ E  + P
Sbjct: 931  CGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEP 990

Query: 557  EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
            +  HY+CMVDLL R G L  A   I  +PIKP A IW  L   CR H D+++AE +++ +
Sbjct: 991  KLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHV 1050

Query: 617  LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
             EL+PD+A  YV L+N+YAEA    + ++ R+ +  + + K PGCSWIEV  K   F S 
Sbjct: 1051 FELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSA 1110

Query: 677  NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
            + +H +   ++  L  L  ++++ GH+           D EKE  +  HSE+LA+ FG++
Sbjct: 1111 DTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEKLAMAFGIL 1170

Query: 726  SLPAKNKFECSRTL 739
            +LP+      ++ L
Sbjct: 1171 NLPSGRTIRVAKNL 1184



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 259/525 (49%), Gaps = 7/525 (1%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N V +   S +S LD      +L  C+  +CL+ G+  H++I+   +  +  + A LV M
Sbjct: 436 NAVELLRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFM 495

Query: 162 YAKCGDIKSMVAVVKQMPYLD-IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           Y  CG ++    +   +   + +   N +++ YAK   + ++   F K+  + +  N YT
Sbjct: 496 YVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYT 555

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +S +L    +L  + E K++H    KL + S   V N+L+  Y K G ++ A  +F+ L 
Sbjct: 556 FSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELG 615

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+V+SW ++I+G   +G     L     M    +  +  T   ++A+CA++ +  +G  
Sbjct: 616 DRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRA 675

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H Q +K   +        ++DMYS  G + +A +  ++MG+  + VSW + IA + R  
Sbjct: 676 LHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK-TVVSWTSLIAAYVREG 734

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             ++AI  F +M     + D ++ +S+L AC+   SL     +H+ I K+     + V +
Sbjct: 735 LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN 794

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y KCGS E+A  VFSQ+   D+VSWN+MI  YS+N    +A+ LF +M  E  RP
Sbjct: 795 ALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RP 853

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              T   +L AC     ++ G+ +   +++  G   E    + ++D+  + G L  A + 
Sbjct: 854 DGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 581 ISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDD 623
              +P K     W  + + C  H   +  +A F   +I  + PD+
Sbjct: 913 FDMIPEKDLIT-WTVMISGCGMHGLGNEAIATFQKMRIAGIKPDE 956



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 6/307 (1%)

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F + GD    + L+ + ++  +D N Y+  + L  CA  +    G M H+ +   G+ + 
Sbjct: 428 FCEVGDLRNAVELLRMSQKSELDLNAYSSILQL--CAEHKCLQEGKMVHSVISSNGIPIE 485

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +G  +V MY   G + E ++    +        WN  ++ + +     E+I  F +M 
Sbjct: 486 GVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQ 545

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           +     + +T+S ILK  + L  +  C++IH  + K  F S   V +SLI  Y K G  +
Sbjct: 546 KLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVD 605

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A ++F +L   DVVSWNSMI     NG +  A+  F +M++  +    +T +  ++AC+
Sbjct: 606 SAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACA 665

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           + G +  G+ +    VK       E  + + ++D+  + G L  A+     +  K T   
Sbjct: 666 NVGSLSLGRALHGQGVK--ACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQK-TVVS 722

Query: 593 WRPLFAA 599
           W  L AA
Sbjct: 723 WTSLIAA 729



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 97/208 (46%), Gaps = 4/208 (1%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            +L  C     LE+GR  H  I +     +  V  +L++MY KCG +     +   +P  D
Sbjct: 861  LLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKD 920

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ-LH 241
            + +   +++G   + L ++A + F K+    ++P+  T++++L  C     ++EG    +
Sbjct: 921  LITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFN 980

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
            +   +     K      ++ +  + G +  A ++ E + ++ +   W A++ G + H D 
Sbjct: 981  SMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDV 1040

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALAS 328
            E   ++   + E  ++P+   + V LA+
Sbjct: 1041 ELAEKVAEHVFE--LEPDNAGYYVLLAN 1066


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 341/629 (54%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C   + L++GR  H ++ K  +  D FV A+LV+MY KC +I+    +  +M   D
Sbjct: 36  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERD 95

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   ++ GYA+    +++   F K+    V P+     T++  C  L A+ + + +  
Sbjct: 96  LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              + ++     +  A++ MY KCG +E A  +F+ + ++NVISW+A+I  +  HG   K
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M   G+ P++ T    L +C+ L+N  MG + H  V K G+ L  FV  A+VD
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVD 275

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY    EI +A+    +M +    V+W   I G+       E++  F +M       D+ 
Sbjct: 276 MYGKCREIEDARFLFDKMPER-DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 334

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
              +++ AC+ L ++     I   I + KF+ +V +G+++I+ + KCG  E A  +F ++
Sbjct: 335 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 394

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V+SW++MI AY  +G+ RKA+ LF  M+  GI P   T +++L ACSH+GLV++G 
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  M ++Y +  +  HY+C+VDLLGRAG+L+ AL  I ++ ++    +W     ACR 
Sbjct: 455 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 514

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D+ +AE  +  +LEL P +   Y+ LSN+YA AG   D  + R LM  + + K PG +
Sbjct: 515 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL 712
           WIEV NK ++F   + +H    ++YE LK L  ++E +G+           D E +  +L
Sbjct: 575 WIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGIL 634

Query: 713 Y-HSERLAVGFGLISLPAKNKFECSRTLE 740
           Y HSE+LA+ FGLI+ P        + L 
Sbjct: 635 YSHSEKLAIAFGLIATPEHTPIRIIKNLR 663



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 208/416 (50%), Gaps = 3/416 (0%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           ++ G+AK   +   F  F +L     +P++YT   ++  C  L  +  G+ +H    K  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
                 V  AL+ MY+KC  +EDA  +F+ + +R++++WT +I G+ + G   + L L  
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MRE+G+ P++      + +CA L   H   +    + ++   L   +GTA++DMY+  G
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            +  A++    M +  + +SW+A IA +  + +  +A++ F  M+ +    D+ T +S+L
Sbjct: 181 CVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS L +L     IH  + K   + +  V ++L++ Y KC   EDA  +F ++   D+V
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +W  MI  Y++ G A ++++LF+KM  EG+ P     + V+ AC+  G +   + + +  
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI-DDY 358

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           ++      +    + M+D+  + G +E A      +  K     W  + AA   H 
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS-WSAMIAAYGYHG 413



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 211/461 (45%), Gaps = 38/461 (8%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  ++ V+  C++   +   R     I +     D  +  ++++MYAKCG ++S   + 
Sbjct: 130 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 189

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S + ++A Y  +    +A   F  +    + P+  T +++L  C  L  + 
Sbjct: 190 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQ 249

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+ +H    K        V  AL+ MY KC  +EDA  +F+ + +R++++WT +I G+ 
Sbjct: 250 MGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYA 309

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G+  + L L   MRE+G+ P++      + +CA L   H        + ++   L   
Sbjct: 310 ECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 369

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +GTA++DM++  G +  A++    M +  + +SW+A IA +  + +  +A++ F  M+R+
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRS 428

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++ T  S+L ACS           H+ +V    E  +   S +         WED 
Sbjct: 429 GILPNKITLVSLLYACS-----------HAGLV----EEGLRFFSLM---------WEDY 464

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
                    ADV  +  ++    + GR  +A+ L E M VE        + A L AC   
Sbjct: 465 S------VRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE---KDEGLWGAFLGACRTH 515

Query: 536 GLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAGKLE 575
             V   +K   S+++   + P+   HY  + ++   AG+ E
Sbjct: 516 KDVVLAEKAATSLLE---LQPQNPGHYILLSNIYANAGRWE 553



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 169/381 (44%), Gaps = 38/381 (9%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L DK  +  +L  CS  + L++GR  H ++ K  +  D FV A+LV+MY KC +I+    
Sbjct: 229 LPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARF 288

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +  +MP  D+ +   ++ GYA+    +++   F K+    V P+     T++  C  L A
Sbjct: 289 LFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGA 348

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           + + + +     + ++     +  A++ M+ KCG +E A  +F+ + ++NVISW+A+I  
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAA 408

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  HG   K L L  +M   GI PN+ T    L +C+           HA +++ G+   
Sbjct: 409 YGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS-----------HAGLVEEGLRF- 456

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                     +S + E +  +  +K          +   +    R  + +EA++    M 
Sbjct: 457 ----------FSLMWEDYSVRADVKH---------YTCVVDLLGRAGRLDEALKLIESMT 497

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 DE  + + L AC     +   E+  + +++ + ++  H    L   Y   G WE
Sbjct: 498 VEK---DEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHY-ILLSNIYANAGRWE 553

Query: 474 DAER---VFSQLTAADVVSWN 491
           D  +   + SQ     +  W 
Sbjct: 554 DVAKTRDLMSQRRLKKIPGWT 574


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/620 (33%), Positives = 350/620 (56%), Gaps = 18/620 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCG-DIKSMVAVVKQMPY 180
           +L  CS       G    A + KT        V  +L++M+ K G DI+S   V  +M +
Sbjct: 151 LLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQH 210

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   ++  Y++  L D A   F +L   +  P+ +T +++L+ C  L     GKQL
Sbjct: 211 KNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQL 270

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  ++    S   V   L+ MY K   +E++  +F  ++  NV+SWTA+I+G+ Q    
Sbjct: 271 HSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQE 330

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ ++L C M    + PN +TF+  L +CASL +  +G   H Q IK G++  + VG ++
Sbjct: 331 QEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSL 390

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-AC 419
           ++MY+  G +  A+K    + +  + +S+N        N K  ++ E+F+  V +     
Sbjct: 391 INMYARSGTMECARKAFNILFEK-NLISYNTAADA---NAKALDSDESFNHEVEHTGVGA 446

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
             FTY+ +L   + + ++   EQIH+ IVKS F +N+ + ++LI  Y+KCG+ E A +VF
Sbjct: 447 SPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVF 506

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + +   +V++W S+I  ++++G A KA+ LF +M+  G++P   T++AVLSACSH GL+ 
Sbjct: 507 NDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLID 566

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +  K F SM   + I P   HY+CMVDLLGR+G L  A+ FI+++P    A +WR    +
Sbjct: 567 EAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGS 626

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H + K+ E  +K+ILE +P D A Y+ LSN+YA  G   D    RK MK K++ KE 
Sbjct: 627 CRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKET 686

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKE 708
           G SWIEV N++++F   + SH +  K+Y++L +L  +I+++G+            D +KE
Sbjct: 687 GYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKE 746

Query: 709 DRVLYHSERLAVGFGLISLP 728
             +  HSE++AV + LIS P
Sbjct: 747 QYLFQHSEKIAVAYALISTP 766



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 236/464 (50%), Gaps = 13/464 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY-- 180
           +L  C R   LELG+  H  +  + +  D  +  SL+ +Y+KCGD ++ +++ + M +  
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID---VQPNHYTYSTMLAICGSLSAIDEG 237
            D+ S + +++ +A N++  +A   FL +       + PN Y ++ +L  C +      G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 238 KQLHAQTMKLQYL-SKTAVSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFK 295
             + A  +K  Y  S   V  AL+ M+ K G+ ++ A  VF+ +  +N+++WT +I  + 
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q G  +  + L C +      P+++T T  L++C  L    +G   H+ VI+ G+A   F
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG  +VDMY+    +  ++K    M    + +SW A I+G+ ++++ +EAI+ F  M+  
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTM-LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               + FT+SS+LKAC+ LP     +Q+H + +K    +   VG+SLI  Y + G+ E A
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSH 534
            + F+ L   +++S+N+   A   N +A  +   F   V   G+  +  T+  +LS  + 
Sbjct: 404 RKAFNILFEKNLISYNT---AADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAAC 460

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            G +  G+++   +VK  G        + ++ +  + G  E AL
Sbjct: 461 IGTIVKGEQIHALIVKS-GFGTNLCINNALISMYSKCGNKEAAL 503



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 168/341 (49%), Gaps = 9/341 (2%)

Query: 94  GFIDDGCSNTVPVTCYSL--ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGD 151
           G +DD     V + C  L  E   DK  +  +LS C   E   LG++ H+ + ++ +  D
Sbjct: 227 GLLDDA----VDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
            FV  +LV+MYAK   +++   +   M + ++ S   L++GY ++    +A   F  +  
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V PN +T+S++L  C SL     GKQLH QT+KL   +   V N+L+ MY + G ME 
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMEC 402

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A   F  L ++N+IS+    +   +  D ++       +   G+  + +T+   L+  A 
Sbjct: 403 ARKAFNILFEKNLISYNTAADANAKALDSDESFNHE--VEHTGVGASPFTYACLLSGAAC 460

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           +     G   HA ++K G      +  A++ MYS  G    A +   +MG   + ++W +
Sbjct: 461 IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYR-NVITWTS 519

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
            I+GF ++    +A+E F +M+      +E TY ++L ACS
Sbjct: 520 IISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACS 560



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 192/362 (53%), Gaps = 7/362 (1%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE--GL 279
           S +L  C     ++ GK LH + +       + + N+L+T+Y KCG  E+A S+F   G 
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGH 102

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALASCASLRNSH 336
            +R+++SW+AII+ F  +    + L     M +   + I PNEY FT  L SC++     
Sbjct: 103 HKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFT 162

Query: 337 MGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            G    A ++K G       VG A++DM++  G   ++ + + +  +  + V+W   I  
Sbjct: 163 TGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITR 222

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + +    ++A++ F +++ ++   D+FT +S+L AC  L   +  +Q+HS +++S   S+
Sbjct: 223 YSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD 282

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VG +L++ Y K  + E++ ++F+ +   +V+SW ++I  Y Q+ + ++AI LF  M+ 
Sbjct: 283 VFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLH 342

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P   TF +VL AC+       G+++    +K  G+       + ++++  R+G +E
Sbjct: 343 GHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK-LGLSTINCVGNSLINMYARSGTME 401

Query: 576 IA 577
            A
Sbjct: 402 CA 403


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/532 (37%), Positives = 314/532 (59%), Gaps = 17/532 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TYS ++  C S  A+ EG  +        +     + N L+ MY+K  ++ DA  +F+ +
Sbjct: 63  TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            QRNVISWT +I+ + +   ++K L L+ LM  D + PN YT++  L SC  + +  M  
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +IK G+    FV +A++D+++ LGE  +A     EM  +  ++ WN+ I GF +N
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQN 238

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +++ A+E F +M R     ++ T +S+L+AC+ L  L    Q H  IVK  ++ ++ + 
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y KCGS EDA RVF+Q+   DV++W++MI   +QNG +++A+ LFE+M   G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T + VL ACSH+GL++DG   F SM K YGI P   HY CM+DLLG+AGKL+ A+ 
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            ++ +  +P A  WR L  ACR   ++ +AE+ +K+++ LDP+DA  Y  LSN+YA +  
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
               EE R  M+ + I KEPGCSWIEV  +I+ F   + SH ++ +V +KL QL+ ++  
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           IG+              + ED + +HSE+LA+ FGL++LP +      + L 
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLR 588



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+   L+NMY K   +     +  QMP  ++ S   +++ Y+K  +  +A    + +   
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           +V+PN YTYS++L  C  +S +   + LH   +K    S   V +AL+ ++ K G  EDA
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
            SVF+ +V  + I W +II GF Q+   +  L L   M+  G    + T T  L +C  L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G   H  ++K    L   +  A+VDMY   G + +A +   +M K    ++W+  
Sbjct: 274 ALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTM 330

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +N  ++EA++ F +M  +    +  T   +L ACS    L      + R +K  +
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS-HAGLLEDGWYYFRSMKKLY 389

Query: 453 ESNV---HVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAII 508
             +    H G  +I+   K G  +DA ++ +++    D V+W +++ A     R ++ ++
Sbjct: 390 GIDPVREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA----CRVQRNMV 444

Query: 509 LFEKMV--VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           L E     V  + P ++    +LS    +    D  +   + +++ GI  E
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 145/281 (51%), Gaps = 9/281 (3%)

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           D  + ++ +  ++  G+  +  T++  +  C S R  H G +    +   G     F+  
Sbjct: 41  DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            +++MY     + +A +   +M +  + +SW   I+ + + +  ++A+E    M+R++  
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            + +TYSS+L++C+    ++    +H  I+K   ES+V V S+LI+ + K G  EDA  V
Sbjct: 160 PNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D + WNS+I  ++QN R+  A+ LF++M   G     +T  +VL AC+   L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276

Query: 539 QDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           + G +    +VK +  ++   A    +VD+  + G LE AL
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDAL 313



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 16/273 (5%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  H  I K  +  D FV ++L++++AK G+ +  ++V  +M   D    N ++ G+A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           +  D A   F ++          T +++L  C  L+ ++ G Q H   +K  Y     ++
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+ MY KCG +EDA  VF  + +R+VI+W+ +I+G  Q+G  ++ L+L   M+  G  
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-------ALGDFVGTAIVDMYSGLGE 369
           PN  T    L +C     SH G +       R M        + +  G  ++D+    G+
Sbjct: 357 PNYITIVGVLFAC-----SHAGLLEDGWYYFRSMKKLYGIDPVREHYG-CMIDLLGKAGK 410

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           + +A K L EM     +V+W   + G  R Q+ 
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRT-LLGACRVQRN 442


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/532 (37%), Positives = 314/532 (59%), Gaps = 17/532 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TYS ++  C S  A+ EG  +        +     + N L+ MY+K  ++ DA  +F+ +
Sbjct: 63  TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            QRNVISWT +I+ + +   ++K L L+ LM  D + PN YT++  L SC  + +  M  
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +IK G+    FV +A++D+++ LGE  +A     EM  +  ++ WN+ I GF +N
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQN 238

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +++ A+E F +M R     ++ T +S+L+AC+ L  L    Q H  IVK  ++ ++ + 
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y KCGS EDA RVF+Q+   DV++W++MI   +QNG +++A+ LFE+M   G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T + VL ACSH+GL++DG   F SM K YGI P   HY CM+DLLG+AGKL+ A+ 
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            ++ +  +P A  WR L  ACR   ++ +AE+ +K+++ LDP+DA  Y  LSN+YA +  
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
               EE R  M+ + I KEPGCSWIEV  +I+ F   + SH ++ +V +KL QL+ ++  
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           IG+              + ED + +HSE+LA+ FGL++LP +      + L 
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLR 588



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+   L+NMY K   +     +  QMP  ++ S   +++ Y+K  +  +A    + +   
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           +V+PN YTYS++L  C  +S +   + LH   +K    S   V +AL+ ++ K G  EDA
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
            SVF+ +V  + I W +II GF Q+   +  L L   M+  G    + T T  L +C  L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G   H  ++K    L   +  A+VDMY   G + +A +   +M K    ++W+  
Sbjct: 274 ALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTM 330

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +N  ++EA++ F +M  +    +  T   +L ACS    L      + R +K  +
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS-HAGLLEDGWYYFRSMKKLY 389

Query: 453 ESNV---HVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAII 508
             +    H G  +I+   K G  +DA ++ +++    D V+W +++ A     R ++ ++
Sbjct: 390 GIDPVREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA----CRVQRNMV 444

Query: 509 LFEKMV--VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           L E     V  + P ++    +LS    +    D  +   + +++ GI  E
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 145/281 (51%), Gaps = 9/281 (3%)

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           D  + ++ +  ++  G+  +  T++  +  C S R  H G +    +   G     F+  
Sbjct: 41  DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            +++MY     + +A +   +M +  + +SW   I+ + + +  ++A+E    M+R++  
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            + +TYSS+L++C+    ++    +H  I+K   ES+V V S+LI+ + K G  EDA  V
Sbjct: 160 PNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D + WNS+I  ++QN R+  A+ LF++M   G     +T  +VL AC+   L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276

Query: 539 QDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           + G +    +VK +  ++   A    +VD+  + G LE AL
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDAL 313



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 16/273 (5%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  H  I K  +  D FV ++L++++AK G+ +  ++V  +M   D    N ++ G+A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           +  D A   F ++          T +++L  C  L+ ++ G Q H   +K  Y     ++
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+ MY KCG +EDA  VF  + +R+VI+W+ +I+G  Q+G  ++ L+L   M+  G  
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-------ALGDFVGTAIVDMYSGLGE 369
           PN  T    L +C     SH G +       R M        + +  G  ++D+    G+
Sbjct: 357 PNYITIVGVLFAC-----SHAGLLEDGWYYFRSMKKLYGIDPVREHYG-CMIDLLGKAGK 410

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           + +A K L EM     +V+W   + G  R Q+ 
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRT-LLGACRVQRN 442


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/567 (34%), Positives = 329/567 (58%), Gaps = 1/567 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H++  KT   GD +V +SL+NMY K G +     +  +MP  +  S   +++GYA 
Sbjct: 137 GKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS 196

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           + + D+A   F  +   +   N +  +++L+   S   +  G+Q+H+  +K   L+  +V
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +NAL+TMY KCG ++DA   FE    +N I+W+A++ G+ Q GD +K L+L   M   G+
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGV 316

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E+T    + +C+ L     G   H+   K G  L  +V +A+VDMY+  G + +A+K
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARK 376

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              E  +    V W + I G+ +N   E  +  + +M       +E T +S+L+ACS L 
Sbjct: 377 GF-ECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLA 435

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L   +Q+H+RI+K  F+  V +GS+L   Y KCGS +D   +F ++ + DV+SWN+MI 
Sbjct: 436 ALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMIS 495

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQNG   KA+ LFEKM++EGI+P   TF+ +LSACSH GLV  G + F+ M  E+ I 
Sbjct: 496 GLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIA 555

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+L RAGKL  A  FI +  +     +WR L  AC+ H + ++  +  ++
Sbjct: 556 PMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEK 615

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ++EL   +++ YV LS++Y   G + + E  R++MK + ++KEPGCSWIE+   ++ F  
Sbjct: 616 LVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVV 675

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            +  H ++ ++  +L+ L + + D G+
Sbjct: 676 GDNQHPQVDEIRLELELLTKLMIDEGY 702



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 257/539 (47%), Gaps = 12/539 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++ L  C+  + +  GR  HA I KT      +VT + +N+YAK   +   + +   + 
Sbjct: 14  LLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSIN 73

Query: 180 Y--LDIASCNCLLAGYAKNALFDQ---AFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSA 233
               D  S N L+  +++N        A S F ++    +V PN +T + + +   +LS 
Sbjct: 74  DNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSD 133

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  GKQ H+  +K        V ++LL MY K G + DA  +F+ + +RN +SW  +I+G
Sbjct: 134 VVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISG 193

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +      +K + +  LMR +    NE+  T  L++  S    + G   H+  IK G+   
Sbjct: 194 YASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAI 253

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V  A+V MY+  G + +A +   E     +S++W+A + G+ +   +++A++ F++M 
Sbjct: 254 VSVANALVTMYAKCGSLDDAVRTF-EFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMH 312

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +     EFT   ++ ACS L ++   +Q+HS   K  F   ++V S++++ Y KCGS  
Sbjct: 313 SSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLA 372

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA + F  +   DVV W S+I  Y QNG     + L+ KM +E + P   T  +VL ACS
Sbjct: 373 DARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACS 432

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
               +  G+++   ++K YG   E    S +  +  + G L+   +    +P +     W
Sbjct: 433 SLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVIS-W 490

Query: 594 RPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             + +      H + K  E   K +LE    D   +V L +  +  GL     E  K+M
Sbjct: 491 NAMISGLSQNGHGN-KALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMM 548



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 190/389 (48%), Gaps = 27/389 (6%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYM--NIEEKGISRNGYSTRNDSFPDGFIDDGCSNT 103
           + A +LF++ P+R  +S + +I +GY   +I +K +       R +   + F        
Sbjct: 170 FDARKLFDRMPERNTVSWATMI-SGYASSDIADKAVEVFELMRREEEIQNEFA------- 221

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
                           +  VLS  + +  +  GR+ H+L  K  +     V  +LV MYA
Sbjct: 222 ----------------LTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYA 265

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KCG +   V   +     +  + + ++ GYA+    D+A   F K+    V P+ +T   
Sbjct: 266 KCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVG 325

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ++  C  L A+ EGKQ+H+   KL +  +  V +A++ MY KCG + DA   FE + Q +
Sbjct: 326 VINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD 385

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+ WT+II G+ Q+GDYE  L L   M+ + + PNE T    L +C+SL     G   HA
Sbjct: 386 VVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHA 445

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           ++IK G  L   +G+A+  MY+  G + +       M  S   +SWNA I+G  +N    
Sbjct: 446 RIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRM-PSRDVISWNAMISGLSQNGHGN 504

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +A+E F +M+      D  T+ ++L ACS
Sbjct: 505 KALELFEKMLLEGIKPDPVTFVNLLSACS 533



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 188/365 (51%), Gaps = 8/365 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P H      L  C     I +G+ LHA+ +K   +S   V+N  L +Y K   +  A ++
Sbjct: 9   PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 276 FEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCL----MREDGIDPNEYTFTVALASC 329
           F+ +    ++ +SW ++IN F Q+         + L    MR + + PN +T     ++ 
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           ++L +   G   H+  +K G +   +VG+++++MY   G +++A+K    M +  ++VSW
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPER-NTVSW 187

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
              I+G+  +   ++A+E F  M R +   +EF  +S+L A +    + T  Q+HS  +K
Sbjct: 188 ATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIK 247

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           +   + V V ++L+  Y KCGS +DA R F      + ++W++M+  Y+Q G + KA+ L
Sbjct: 248 NGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKL 307

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F KM   G+ P+  T + V++ACS    V +G+++  S   + G   +    S +VD+  
Sbjct: 308 FNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM-HSFAFKLGFGLQLYVLSAVVDMYA 366

Query: 570 RAGKL 574
           + G L
Sbjct: 367 KCGSL 371


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/543 (36%), Positives = 313/543 (57%), Gaps = 13/543 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L+G  +  +   Y+T+L  C     + +G+ +HA  ++  +     + N LL MY KCG 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E+A  VFE + QR+ ++WT +I+G+ QH      L     M   G  PNE+T +  + +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A+ R    G+  H   +K G      VG+A++D+Y+  G + +A+     + +S + VS
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVS 229

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAG  R   TE+A+E F  M+R+      F+Y+S+  ACS    L   + +H+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS  +     G++L++ Y K GS  DA ++F +L   DVVSWNS++ AY+Q+G  ++A+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GIRP   +FL+VL+ACSHSGL+ +G   +E M K+ GI+PE  HY  +VDLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL FI  +PI+PTA IW+ L  ACR H + ++  + ++ + ELDPDD   +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G   DA   RK MK   + KEP CSW+E+ N I+ F + ++ H +  ++  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
           K ++++ +I+++G          H D  E+E  + YHSE++A+ F L++ P  +     +
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 738 TLE 740
            + 
Sbjct: 589 NIR 591



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 247/560 (44%), Gaps = 54/560 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D++F   +L  C+  + L  GR  HA I ++    D  +  +L+NMYAKCG ++    V 
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++MP  D  +   L++GY+++     A  FF ++      PN +T S+++    +     
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH   +K  + S   V +ALL +Y + G+M+DA+ VF+ L  RN +SW A+I G  
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +    EK L L   M  DG  P+ +++     +C+S      G   HA +IK G  L  F
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G  ++DMY+  G I +A+K    + K    VSWN+ +  + ++   +EA+  F +M R 
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +E ++ S+L ACS    L      +  + K           ++++   + G    A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 476 ERVFSQLTAADVVS-WNSMIKA----------------------------------YSQN 500
            R   ++      + W +++ A                                  Y+  
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477

Query: 501 GRARKAIILFEKMVVEGIRP---------TNSTFLAVLSACSHSGLVQDGQKVFESM--V 549
           GR   A  + +KM   G++           N+  + V +   H    +  +K  E +  +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRCH 603
           KE G +P+ +H    VD   R   L+     IAL F + N P   T  I + +     CH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597

Query: 604 SDLKMA-EFISKQILELDPD 622
           + +K+A + + ++I+  D +
Sbjct: 598 TAIKLASKVVGREIIVRDTN 617


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 217/662 (32%), Positives = 354/662 (53%), Gaps = 25/662 (3%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N V      L + ++  +   +L  C         R  H  I KT    D FV   LVN+
Sbjct: 49  NVVDAEEPKLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNV 108

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y+KCG ++S   V   +P  ++ +   LL GY +N+    A   F+K+      P++YT 
Sbjct: 109 YSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTL 168

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
             +L  C SL +I+ GKQ+HA  +K      T++ N+L + Y K   +E A   F+ + +
Sbjct: 169 GIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKE 228

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           ++VISWT++I+    +G   + L     M  DG+ PNEYT T  L++C  +    +G   
Sbjct: 229 KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI 288

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H+  IK G      +  +I+ +Y   G + EA+K  + M ++ + V+WNA IAG  +   
Sbjct: 289 HSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMD 347

Query: 402 TEE-----------AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             E           A+  F ++ R+    D FT+SS+L  CS L +L   EQIH +I+KS
Sbjct: 348 LAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKS 407

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              ++V VG++L+  YNKCGS + A + F ++ +  ++SW SMI  ++++G +++A+ LF
Sbjct: 408 GVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLF 467

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E M + GI+P   TF+ VLSACSH+GL  +    FE M K+Y I P   H++C++D+  R
Sbjct: 468 EDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLR 527

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
            G++E A   +  +  +P   IW  L A CR H    +  + ++Q+L+L P D   YV+L
Sbjct: 528 LGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSL 587

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
            NM+  AG   D  + RKLMK +++ K    SWI +  K+Y F   +KSH +  ++Y+ L
Sbjct: 588 LNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLL 647

Query: 691 KQLMQQIEDIGHTDNEK---------EDRVL----YHSERLAVGFGLISLPAKNKFECSR 737
           + ++ +++ +G+   E          E+RVL     HSE+LA+ FGL++LP        +
Sbjct: 648 ETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVK 707

Query: 738 TL 739
           ++
Sbjct: 708 SI 709


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/526 (37%), Positives = 313/526 (59%), Gaps = 13/526 (2%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P    YS ML  C  L  + +G+ +HA      +     + N +L MY KCG +E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ +  ++++SWT +I+G+ Q G   + L L   M   G  PNE+T +  L +  +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           + H G   HA  +K G  +   VG++++DMY+    + EAK     +  + + VSWNA I
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA-AKNVVSWNALI 279

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AG  R  + E  +  F QM+R       FTYSS+  AC+   SL   + +H+ ++KS  +
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQ 339

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
              ++G++LI+ Y K GS +DA++VF +L   D+VSWNS+I  Y+Q+G   +A+ LFE+M
Sbjct: 340 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 399

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +   ++P   TFL+VL+ACSHSGL+ +GQ  FE M K++ I  + AH+  +VDLLGRAG+
Sbjct: 400 LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGR 458

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L  A  FI  +PIKPTA +W  L  +CR H ++ +  + ++QI ELDP D+  +V LSN+
Sbjct: 459 LNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 518

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH---SEMPKVYEKL 690
           YA AG  +DA + RK+MK   + KEP CSW+E+ N+++ F + + SH    E+ +++EK+
Sbjct: 519 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 578

Query: 691 KQLMQQI---EDIGHT-----DNEKEDRVLYHSERLAVGFGLISLP 728
              +++I    D  H        ++E ++ YHSE+LA+ F ++  P
Sbjct: 579 SGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTP 624



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 230/456 (50%), Gaps = 8/456 (1%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           + C SLE   ++    ++L+ C+    L+ GR  HA I  +    D  +   ++NMYAKC
Sbjct: 96  INCGSLEP--ERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G ++    +  +MP  D+ S   L++GY+++    +A + F K+  +  QPN +T S++L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
              G+  +   G+QLHA ++K  Y     V ++LL MY +   M +A+ +F  L  +NV+
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G  + G+ E  +RL   M   G +P  +T++    +CAS  +   G   HA V
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           IK G     ++G  ++DMY+  G I +AKK  + + K    VSWN+ I+G+ ++    EA
Sbjct: 334 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ-DIVSWNSIISGYAQHGLGAEA 392

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F QM++     +E T+ S+L ACS    L   +     + K K E+ V    ++++ 
Sbjct: 393 LQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDL 452

Query: 466 YNKCGSWEDAERVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
             + G   +A +   ++      + W +++ +   +      +   E++    + P +S 
Sbjct: 453 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIF--ELDPHDSG 510

Query: 525 FLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPEEA 559
              +LS   + +G + D  KV   M+KE G+  E A
Sbjct: 511 PHVLLSNIYASAGRLSDAAKV-RKMMKESGVKKEPA 545



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 195/389 (50%), Gaps = 16/389 (4%)

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV----IKRGMALGDFVGTA 359
           L ++ L+    ++P    ++  L  C  LR    G   HA +     +  + L +F    
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF---- 145

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           I++MY+  G + EA+    +M  +   VSW   I+G+ ++ +  EA+  F +M+      
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQP 204

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +EFT SS+LKA    PS     Q+H+  +K  ++ NVHVGSSL++ Y +     +A+ +F
Sbjct: 205 NEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF 264

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + L A +VVSWN++I  +++ G     + LF +M+ +G  PT+ T+ +V +AC+ SG ++
Sbjct: 265 NSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLE 324

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+ V   ++K  G  P     + ++D+  ++G ++ A      L +K     W  + + 
Sbjct: 325 QGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISG 382

Query: 600 CRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
              H     A  + +Q+L  ++ P++   ++++    + +GL  + +   +LMK  +I  
Sbjct: 383 YAQHGLGAEALQLFEQMLKAKVQPNE-ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA 441

Query: 658 EPG--CSWIEVYNKIYRFFSQNKSHSEMP 684
           +     + +++  +  R    NK   EMP
Sbjct: 442 QVAHHVTVVDLLGRAGRLNEANKFIEEMP 470


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/620 (35%), Positives = 335/620 (54%), Gaps = 15/620 (2%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            LE  +  H    +     D  +  +L++MYAKCG I     V   M   D+ S N ++ G
Sbjct: 439  LEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGG 498

Query: 193  YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             A+N    +AF+ FL++    + P+  TY ++L   GS  A++   ++H   ++   +S 
Sbjct: 499  LAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISD 558

Query: 253  TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              V +A + MYI+CG ++DA  +F+ L  R+V +W A+I G  Q     + L L   M+ 
Sbjct: 559  FRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQR 618

Query: 313  DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIW 371
            +G  P+  TF   L++             H+     G+   D  VG A+V  YS  G + 
Sbjct: 619  EGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV--DLRVGNALVHTYSKCGNVK 676

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
             AK+   +M +  +  +W   I G  ++    +A   F QM+R     D  TY SIL AC
Sbjct: 677  YAKQVFDDMVER-NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSAC 735

Query: 432  SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            +   +L   +++H+  V +   S++ VG++L+  Y KCGS +DA  VF  +   DV SW 
Sbjct: 736  ASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWT 795

Query: 492  SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
             MI   +Q+GR  +A+  F KM  EG +P   +++AVL+ACSH+GLV +G++ F SM ++
Sbjct: 796  VMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQD 855

Query: 552  YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
            YGI P   HY+CMVDLLGRAG LE A +FI N+PI+P    W  L  AC  + +L+MAEF
Sbjct: 856  YGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEF 915

Query: 612  ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             +K+ L+L P  A+ YV LSN+YA  G        R +M+ K I KEPG SWIEV N+I+
Sbjct: 916  AAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIH 975

Query: 672  RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAV 720
             F   + SH E  ++Y +L  L+++++  G+          TD E KE  +  HSE+LA+
Sbjct: 976  SFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAI 1035

Query: 721  GFGLISLPAKNKFECSRTLE 740
             +GL+   +K+     + L 
Sbjct: 1036 VYGLMHTQSKDPIRVYKNLR 1055



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 270/560 (48%), Gaps = 9/560 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D    + +L  C ++E + L ++ H  I K+ +  + +V   L+ +Y +CG ++    V
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++   +I     ++ GYA+    + A   + K+     QPN  TY ++L  C     +
Sbjct: 176 FDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNL 235

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK++HA  ++  + S   V  AL+ MY+KCG +EDA+ +F+ +V+RNVISWT +I G 
Sbjct: 236 KWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGL 295

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G  ++   L   M+ +G  PN YT+   L + AS          H+  +  G+AL  
Sbjct: 296 AHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDL 355

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            VG A+V MY+  G I +A+     M +     SW   I G  ++ + +EA   F QM R
Sbjct: 356 RVGNALVHMYAKSGSIDDARVVFDGMTER-DIFSWTVMIGGLAQHGRGQEAFSLFLQMQR 414

Query: 415 NDAACDEFTYSSILKACSL--LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           N    +  TY SIL A ++    +L   + +H    ++ F S++ +G++LI  Y KCGS 
Sbjct: 415 NGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSI 474

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           +DA  VF  +   DV+SWN+M+   +QNG   +A  +F +M  EG+ P ++T+L++L+  
Sbjct: 475 DDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTH 534

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             +  ++   +V +  V E G++ +    S  + +  R G ++ A +    L ++     
Sbjct: 535 GSTDALEWVNEVHKHAV-ETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTT- 592

Query: 593 WRPLFAAC---RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           W  +       RC  +  ++ F+  Q     PD       LS    E  L+   E     
Sbjct: 593 WNAMIGGAAQQRCGRE-ALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHA 651

Query: 650 MKMKEISKEPGCSWIEVYNK 669
                +    G + +  Y+K
Sbjct: 652 TDAGLVDLRVGNALVHTYSK 671



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 97/179 (54%), Gaps = 2/179 (1%)

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           ++A+      V+   A D F+Y +IL+ C     +   +Q+H  I+KS  E N++V + L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y +CG  + A +VF +L   ++  W +MI  Y++ G A  A+ +++KM  E  +P  
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIF 580
            T+L++L AC     ++ G+K+   +++  G   +    + +V++  + G +E A LIF
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDAQLIF 277



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + +LS C+    LE  +  H       +  D  V  +LV+MYAKCG I    +V 
Sbjct: 724 DATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVF 783

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S   ++ G A++    +A  FF+K+     +PN Y+Y  +L  C     +D
Sbjct: 784 DDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVD 843

Query: 236 EG-KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG +Q  + T              ++ +  + G++E+AE     + ++ +   W A++  
Sbjct: 844 EGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGA 903

Query: 294 FKQHGDYE 301
              +G+ E
Sbjct: 904 CVTYGNLE 911


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/684 (31%), Positives = 360/684 (52%), Gaps = 82/684 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C         +  H+ I KT    + F+  +L++ YAK G I     V  QMP+ +
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 183 IASCNCLLAGYAK-------NALFD---------------------------QAFSFFLK 208
           + S N +L+ Y+K         LFD                           +A++  LK
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY----- 263
            DG     N  T+ST+L +      +  G+Q+H   +K  ++S   V + L+ MY     
Sbjct: 135 NDG-SFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 264 --------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                                     ++CG +ED++ +F  + +R+ ISWT++I GF Q+
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G     + +   M+ + +  ++YTF   L +C  +     G   HA +I+       FV 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY     I  A+   K+M    + VSW A + G+ +N  +EEA++ FS M +   
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKM-TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+FT  S++ +C+ L SL    Q H+R + S   S + V ++L+  Y KCGS ED+ R
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F++++  D V+W +++  Y+Q G+A + I LFE M+  G++P   TF+ VLSACS +GL
Sbjct: 433 LFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGL 492

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V+ G ++FESM+ E+GI+P + HY+CM+DL  RAG++E A  FI+ +P  P A  W  L 
Sbjct: 493 VEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLL 552

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           ++CR + ++ + ++ ++ ++ELDP + A YV LS++YA  G   +    RK M+ K + K
Sbjct: 553 SSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRK 612

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ-------------IEDIGHTD 704
           EPGCSWI+  N+++ F + +KS+    ++Y +L++L  +             + D+G  D
Sbjct: 613 EPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVG--D 670

Query: 705 NEKEDRVLYHSERLAVGFGLISLP 728
           +EK   + +HSE+LA+ FGL+ +P
Sbjct: 671 SEKIKMLNHHSEKLAIAFGLLFIP 694



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 226/479 (47%), Gaps = 54/479 (11%)

Query: 51  LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYS 110
           LF+  P+R G+S + LI +GY        S   Y+           +DG  N   +T  +
Sbjct: 97  LFDAMPRRDGVSWNSLI-SGYAGCGLIYQSVKAYNLM-------LKNDGSFNLNRITFST 148

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L            L   S+  C++LGR+ H  + K       FV + LV+MY+K G I  
Sbjct: 149 L------------LILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISC 196

Query: 171 MVAVVKQMPYLDIASCNCL-------------------------------LAGYAKNALF 199
              V  ++P  ++   N L                               + G+ +N L 
Sbjct: 197 ARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLD 256

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             A   F ++   ++Q + YT+ ++L  CG + A+ EGKQ+HA  ++  Y     V++AL
Sbjct: 257 RDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASAL 316

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + MY KC  ++ AE+VF+ +  +NV+SWTA++ G+ Q+G  E+ ++    M++ GI+P++
Sbjct: 317 VDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDD 376

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +T    ++SCA+L +   G  FHA+ +  G+     V  A+V +Y   G I ++ +   E
Sbjct: 377 FTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNE 436

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +      V+W A ++G+ +  K  E I  F  M+ +    D+ T+  +L ACS    +  
Sbjct: 437 I-SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEK 495

Query: 440 CEQIHSRIVKSKFESNVHVG-SSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKA 496
             QI   ++       +    + +I+ +++ G  E+A    +++  + D +SW +++ +
Sbjct: 496 GNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSS 554



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 193/422 (45%), Gaps = 66/422 (15%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           NHY    +L +C       + K LH+  +K     +T + N L++ Y K G +  A  VF
Sbjct: 10  NHYC--ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVF 67

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM-REDGI-------------------- 315
           + +   N+ SW  I++ + + G   +   L   M R DG+                    
Sbjct: 68  DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127

Query: 316 ------------DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
                       + N  TF+  L   +      +G   H  V+K G     FVG+ +VDM
Sbjct: 128 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187

Query: 364 YSGLGEIWEAKKQLKE-------------MG-----------------KSASSVSWNAQI 393
           YS +G I  A+K   E             MG                 +   S+SW + I
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            GF +N    +AI+ F +M   +   D++T+ S+L AC  + +L   +Q+H+ I+++ ++
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N+ V S+L++ Y KC + + AE VF ++T  +VVSW +M+  Y QNG + +A+  F  M
Sbjct: 308 DNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDM 367

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
              GI P + T  +V+S+C++   +++G + F +     G++      + +V L G+ G 
Sbjct: 368 QKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGS 426

Query: 574 LE 575
           +E
Sbjct: 427 IE 428



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 110/265 (41%), Gaps = 38/265 (14%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y ++LK C    +    + +HS I+K+       + ++LI +Y K GS   A +VF Q+ 
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKM--------------------VVEGIRPTN- 522
             ++ SWN+++ AYS+ GR  +   LF+ M                    + + ++  N 
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 523 ------------STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
                        TF  +L   S  G V+ G+++   +VK +G +      S +VD+  +
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVK-FGFMSYVFVGSPLVDMYSK 190

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
            G +  A      LP K        +    RC       E   +   E+   D+  + ++
Sbjct: 191 MGMISCARKVFDELPEKNVVMYNTLIMGLMRCGR----VEDSKRLFFEMRERDSISWTSM 246

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEI 655
              + + GL  DA +  + MK++ +
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENL 271


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/543 (36%), Positives = 313/543 (57%), Gaps = 13/543 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L+G  +  +   Y+T+L  C     + +G+ +HA  ++  +     + N LL MY KCG 
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E+A  VFE + QR+ ++WT +I+G+ QH      L     M   G  PNE+T +  + +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A+ R    G+  H   +K G      VG+A++D+Y+  G + +A+     + +S + VS
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVS 229

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAG  R   TE+A+E F  M+R+      F+Y+S+  ACS    L   + +H+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS  +     G++L++ Y K GS  DA ++F +L   DVVSWNS++ AY+Q+G  ++A+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GIRP   +FL+VL+ACSHSGL+ +G   +E M K+ GI+PE  HY  +VDLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL FI  +PI+PTA IW+ L  ACR H + ++  + ++ + ELDPDD   +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G   DA   RK MK   + KEP CSW+E+ N I+ F + ++ H +  ++  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
           K ++++ +I+++G          H D  E+E  + YHSE++A+ F L++ P  +     +
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 738 TLE 740
            + 
Sbjct: 589 NIR 591



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 260/589 (44%), Gaps = 55/589 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D++F   +L  C+  + L  GR  HA I ++    D  +  +L+NMYAKCG ++    V 
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++MP  D  +   L++GY+++     A  FF ++      PN +T S+++    +     
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH   +K  + S   V +ALL +Y + G+M+DA+ VF+ L  RN +SW A+I G  
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +    EK L L   M  DG  P+ +++     +C+S      G   HA +IK G  L  F
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G  ++DMY+  G I +A+K    + K    VSWN+ +  + ++   +EA+  F +M R 
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +E ++ S+L ACS    L      +  + K           ++++   + G    A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 476 ERVFSQLTAADVVS-WNSMIKA----------------------------------YSQN 500
            R   ++      + W +++ A                                  Y+  
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477

Query: 501 GRARKAIILFEKMVVEGIRP---------TNSTFLAVLSACSHSGLVQDGQKVFESM--V 549
           GR   A  + +KM   G++           N+  + V +   H    +  +K  E +  +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRCH 603
           KE G +P+ +H    VD   R   L+     IAL F + N P   T  I + +     CH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597

Query: 604 SDLKMA-EFISKQILELDPDDAAVYVTLSNMY-AEAGLQADAEEQRKLM 650
           + +K+A + + ++I+  D +    +   S +Y    G+  D+ +++ L+
Sbjct: 598 TAIKLASKVVGREIIVRDTNRFHHFKDASILYLVVRGIDQDSNKEKGLV 646


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/533 (36%), Positives = 310/533 (58%), Gaps = 18/533 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TYS ++  C    A+ + + +H       Y  KT + N L+ MY+K G++++A ++F+ +
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RNV+SWT +I+ +       K L  + LM  +G+ PN YT++  L +C  L N     
Sbjct: 78  PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLRQ-- 135

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  ++K G+    FV +A++D YS LGE  +A     EM  +   V WN+ I GF +N
Sbjct: 136 -LHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLVVWNSIIGGFAQN 193

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              +E +  + +M R D   D+ T +S+L+AC+ L  L    Q+H  ++K  ++ ++ + 
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251

Query: 460 SSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           ++L++ Y KCGS EDA  +F+++ T  DV+SW++MI   +QNG +  A+ LFE M  +G 
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P   T L VL ACSH+GLV DG   F+SM + +GI P   HY C++DLLGRAGKL+ A+
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAV 371

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I  +  +P A  WR L  ACR H ++ +A + +K+IL+LDP DA  Y+ LSN+YA + 
Sbjct: 372 KLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQ 431

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              D  E R+ M+ + + K+PGCSWIEV  +++ F   + SH  + ++  +L QL+Q++ 
Sbjct: 432 KWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQRLM 491

Query: 699 DIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +G+  +           + ED + YHSE+LA+ FGL+SLP +      + L 
Sbjct: 492 RLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLR 544



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 171/379 (45%), Gaps = 11/379 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E++  C     ++  R  H  +         F+  +L+NMY K G +     +  +MP  
Sbjct: 21  ELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMPDR 80

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   +++ Y+ + L  +A  F + +    V+PN YTYS++L  C  L  +   +QLH
Sbjct: 81  NVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLH 137

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K+   S   V +AL+  Y K G   DA +VF  ++  +++ W +II GF Q+ D +
Sbjct: 138 GSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGD 197

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M+      ++ T T  L +C  L    +G   H  V+K    L   +  A++
Sbjct: 198 ETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQDL--ILNNALL 255

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY   G + +A      M      +SW+  IAG  +N  + +A++ F  M       + 
Sbjct: 256 DMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNY 315

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF---ESNVHVGSSLIEAYNKCGSWEDAERV 478
            T   +L ACS    L      + + +K  F       H G  +I+   + G  ++A ++
Sbjct: 316 ITILGVLFACS-HAGLVNDGWYYFQSMKEHFGIDPGREHYG-CIIDLLGRAGKLDEAVKL 373

Query: 479 FSQLT-AADVVSWNSMIKA 496
             ++    D V+W  ++ A
Sbjct: 374 IHEMNHEPDAVTWRILLGA 392



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 15/295 (5%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ H  I K  +  D FV ++L++ Y+K G+    + V  +M   D+   N ++ G+A+N
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           +  D+    + ++   D   +  T +++L  C  L+ ++ G+Q+H   +K  Y     ++
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251

Query: 257 NALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           NALL MY KCG +EDA  +F  ++ +++VISW+ +I G  Q+G     L+L   M+  G 
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311

Query: 316 DPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
            PN  T    L +C     SH G      Y F +     G+  G      I+D+    G+
Sbjct: 312 KPNYITILGVLFAC-----SHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGK 366

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           + EA K + EM     +V+W   +     ++  + AI A  ++++ D A D  TY
Sbjct: 367 LDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPA-DAGTY 420



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 9/291 (3%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M  + +  +  T++  +  C          + H  V   G     F+   +++MY   G 
Sbjct: 7   MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + EA+    EM    + VSW   I+ +  +    +A++    M+R     + +TYSS+L+
Sbjct: 67  LDEARNLFDEM-PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLR 125

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC  L +L    Q+H  I+K   ES+V V S+LI+ Y+K G   DA  VF+++   D+V 
Sbjct: 126 ACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVV 182

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNS+I  ++QN    + + L+++M         ST  +VL AC+   L++ G++V   ++
Sbjct: 183 WNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL 242

Query: 550 K-EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           K +  ++   A    ++D+  + G LE A +  + +  +     W  + A 
Sbjct: 243 KYDQDLILNNA----LLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG 289



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 15/220 (6%)

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++A   M RN  + D  TYS ++K C +  ++     +H  +  + +E    + ++LI  
Sbjct: 1   MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G  ++A  +F ++   +VVSW +MI AYS +    KA+     M+ EG+RP   T+
Sbjct: 61  YVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTY 120

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            +VL AC   GL+   Q      + + G+  +    S ++D   + G+   AL  + N  
Sbjct: 121 SSVLRAC--DGLLNLRQ--LHGSILKVGLESDVFVRSALIDTYSKLGEQHDAL-NVFNEM 175

Query: 586 IKPTAPIWRPLFAACRCHSD----------LKMAEFISKQ 615
           I     +W  +      +SD          +K A+F++ Q
Sbjct: 176 ITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQ 215



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 52/313 (16%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK-SMVAV 174
           D+  +  VL  C+    LELGR+ H  + K     D  +  +L++MY KCG ++ + +  
Sbjct: 214 DQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLF 271

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + M   D+ S + ++AG A+N     A   F  +     +PN+ T   +L  C     +
Sbjct: 272 TRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLV 331

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           ++G   + Q+MK  +                 G+    E             +  II+  
Sbjct: 332 NDG-WYYFQSMKEHF-----------------GIDPGRE------------HYGCIIDLL 361

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G  ++ ++L+  M     +P+  T+ + L +C   +N  +      +++K   A   
Sbjct: 362 GRAGKLDEAVKLIHEMNH---EPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPA--- 415

Query: 355 FVGTAIV--DMYSG---LGEIWEAKKQLKEMG-KSASSVSW-------NAQIAGFFRNQK 401
             GT I+  ++Y+      ++ E +++++  G K     SW       +A I G   + +
Sbjct: 416 DAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPR 475

Query: 402 TEEAIEAFSQMVR 414
            EE     SQ+++
Sbjct: 476 IEEIKRELSQLIQ 488


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/526 (37%), Positives = 314/526 (59%), Gaps = 14/526 (2%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P    YS ML  C  L  + +G+ +HA      +     + N +L MY KCG +E+A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ +  ++++SWT +I+G+ Q G   + L L   M   G  PNE+T +  L +  +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           + H G   HA  +K G  +   VG++++DMY+    + EAK     +  + + VSWNA I
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA-AKNVVSWNALI 279

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AG  R  + E  +  F QM+R       FTYSS+L AC+   SL   + +H+ ++KS  +
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQ 338

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
              ++G++LI+ Y K GS +DA++VF +L   D+VSWNS+I  Y+Q+G   +A+ LFE+M
Sbjct: 339 PIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQM 398

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +   ++P   TFL+VL+ACSHSGL+ +GQ  FE M K++ I  + AH+  +VDLLGRAG+
Sbjct: 399 LKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGR 457

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L  A  FI  +PIKPTA +W  L  ACR H ++ +  + ++QI ELDP D+  +V LSN+
Sbjct: 458 LNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNI 517

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH---SEMPKVYEKL 690
           YA AG  +DA + RK+MK   + KEP CSW+E+ N+++ F + + SH    E+ +++EK+
Sbjct: 518 YASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKI 577

Query: 691 KQLMQQI---EDIGHT-----DNEKEDRVLYHSERLAVGFGLISLP 728
              +++I    D  H        ++E ++ YHSE+LA+ F ++  P
Sbjct: 578 SGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTP 623



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 231/456 (50%), Gaps = 9/456 (1%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           + C SLE   ++    ++L+ C+    L+ GR  HA I  +    D  +   ++NMYAKC
Sbjct: 96  INCGSLEP--ERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKC 153

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G ++    +  +MP  D+ S   L++GY+++    +A + F K+  +  QPN +T S++L
Sbjct: 154 GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLL 213

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
              G+  +   G+QLHA ++K  Y     V ++LL MY +   M +A+ +F  L  +NV+
Sbjct: 214 KASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVV 273

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G  + G+ E  +RL   M   G +P  +T++  LA CAS  +   G   HA V
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHV 332

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           IK G     ++G  ++DMY+  G I +AKK  + + K    VSWN+ I+G+ ++    EA
Sbjct: 333 IKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ-DIVSWNSIISGYAQHGLGAEA 391

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F QM++     +E T+ S+L ACS    L   +     + K K E+ V    ++++ 
Sbjct: 392 LQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDL 451

Query: 466 YNKCGSWEDAERVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
             + G   +A +   ++      + W +++ A   +      +   E++    + P +S 
Sbjct: 452 LGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIF--ELDPHDSG 509

Query: 525 FLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPEEA 559
              +LS   + +G + D  KV   M+KE G+  E A
Sbjct: 510 PHVLLSNIYASAGRLSDAAKV-RKMMKESGVKKEPA 544



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 195/389 (50%), Gaps = 17/389 (4%)

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV----IKRGMALGDFVGTA 359
           L ++ L+    ++P    ++  L  C  LR    G   HA +     +  + L +F    
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNF---- 145

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           I++MY+  G + EA+    +M  +   VSW   I+G+ ++ +  EA+  F +M+      
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKM-PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQP 204

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +EFT SS+LKA    PS     Q+H+  +K  ++ NVHVGSSL++ Y +     +A+ +F
Sbjct: 205 NEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIF 264

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + L A +VVSWN++I  +++ G     + LF +M+ +G  PT+ T+ +VL AC+ SG ++
Sbjct: 265 NSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLE 323

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+ V   ++K  G  P     + ++D+  ++G ++ A      L +K     W  + + 
Sbjct: 324 QGKWVHAHVIKSGG-QPIAYIGNTLIDMYAKSGSIKDAKKVFRRL-VKQDIVSWNSIISG 381

Query: 600 CRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
              H     A  + +Q+L  ++ P++   ++++    + +GL  + +   +LMK  +I  
Sbjct: 382 YAQHGLGAEALQLFEQMLKAKVQPNE-ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEA 440

Query: 658 EPG--CSWIEVYNKIYRFFSQNKSHSEMP 684
           +     + +++  +  R    NK   EMP
Sbjct: 441 QVAHHVTVVDLLGRAGRLNEANKFIEEMP 469


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/653 (32%), Positives = 352/653 (53%), Gaps = 25/653 (3%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L + ++  +   +L  C         R  H  I KT    D FV   LVN+Y+KCG ++S
Sbjct: 52  LGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMES 111

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V   +P  ++ +   LL GY +N+    A   F+K+      P++YT   +L  C S
Sbjct: 112 AHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L +I+ GKQ+HA  +K      T++ N+L + Y K   +E A   F+ + +++VISWT++
Sbjct: 172 LQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSV 231

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+    +G   + L     M  DG+ PNEYT T  L++C  +    +G   H+  IK G 
Sbjct: 232 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGY 291

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE------ 404
                +  +I+ +Y   G + EA+K  + M ++ + V+WNA IAG  +     E      
Sbjct: 292 GSSILIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGHAKMMDLAEDDVAAH 350

Query: 405 -----AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
                A+  F ++ R+    D FT+SS+L  CS L +L   EQIH +I+KS   ++V VG
Sbjct: 351 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 410

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  YNKCGS + A + F ++ +  ++SW SMI  ++++G +++A+ LFE M + GI+
Sbjct: 411 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 470

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   TF+ VLSACSH+GL  +    FE M K+Y I P   H++C++D+  R G++E A  
Sbjct: 471 PNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFD 530

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            +  +  +P   IW  L A CR H    +  + ++Q+L+L P D   YV+L NM+  AG 
Sbjct: 531 VVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGR 590

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             D  + RKLMK +++ K    SWI +  K+Y F   +KSH +  ++Y+ L+ ++ +++ 
Sbjct: 591 WKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKA 650

Query: 700 IGHTDNEK---------EDRVL----YHSERLAVGFGLISLPAKNKFECSRTL 739
           +G+   E          E+RVL     HSE+LA+ FGL++LP        +++
Sbjct: 651 LGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSI 703


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/629 (32%), Positives = 335/629 (53%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    ++ GR+ HA++ +     D F   +LV+MY K G +     + ++MP  D
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++G   N    +A    L++    + PN +  S++L  C    A D G+Q+H 
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   +   L+ MY K   ++DA  VF+ +  R++I W A+I+G    G +++
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   +R++G+  N  T    L S ASL  +      HA   K G      V   ++D
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y     + +A +  +E   S   ++  + I    +    E AI+ F +M+R     D F
Sbjct: 448 SYWKCSCLSDAIRVFEEC-SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 506

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H+ ++K +F S+   G++L+  Y KCGS EDAE  FS L
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               VVSW++MI   +Q+G  ++A+ LF +MV EGI P + T  +VL AC+H+GLV + +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM + +GI   E HYSCM+DLLGRAGKL+ A+  ++++P +  A +W  L  A R 
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 686

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D ++ +  ++++  L+P+ +  +V L+N YA +G+  +  + RKLMK   I KEP  S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 746

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           W+EV +K++ F   +KSH    ++Y KL +L   +   G+  N           EKE  +
Sbjct: 747 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLL 806

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSERLAV F L+S P        + L 
Sbjct: 807 SHHSERLAVAFALLSTPPGAPIRVKKNLR 835



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 263/550 (47%), Gaps = 17/550 (3%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E +   +F + V+  C  +   +LG + HA+   T    D FV  +LV MY   G +   
Sbjct: 97  EGVCCNEFALPVVLKCVPDA--QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDA 154

Query: 172 VAVVKQM-PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
             V  +     +  S N L++ Y KN     A   F ++    +QP  + +S ++  C  
Sbjct: 155 RRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 214

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              ID G+Q+HA  +++ Y      +NAL+ MY+K G ++ A  +FE +   +V+SW A+
Sbjct: 215 SRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNAL 274

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G   +G   + + L+  M+  G+ PN +  +  L +CA      +G   H  +IK   
Sbjct: 275 ISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA 334

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              D++G  +VDMY+    + +A K    M      + WNA I+G     + +EA   F 
Sbjct: 335 DSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCSHGGRHDEAFSIFY 393

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            + +     +  T +++LK+ + L + +   Q+H+   K  F  + HV + LI++Y KC 
Sbjct: 394 GLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCS 453

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
              DA RVF + ++ D+++  SMI A SQ      AI LF +M+ +G+ P      ++L+
Sbjct: 454 CLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLN 513

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+     + G++V   ++K    + +    + +V    + G +E A +  S+LP +   
Sbjct: 514 ACASLSAYEQGKQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV 572

Query: 591 PIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYA---EAGLQADAEE 645
             W  +      H   K A E   + + E ++P+    ++T++++      AGL  +A  
Sbjct: 573 S-WSAMIGGLAQHGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEA-- 625

Query: 646 QRKLMKMKEI 655
           +R    MKE+
Sbjct: 626 KRYFNSMKEM 635



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 169/331 (51%), Gaps = 5/331 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T S  L    +  A+  G  LHA  +K  +L+  ++ N L++ Y KC     A  VF+ +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEI 63

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
                +SW++++  +  +G     ++    MR +G+  NE+   V L     + ++ +G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGA 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA  +  G     FV  A+V MY G G + +A++   E G   ++VSWN  ++ + +N
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +  +AI+ F +MV +     EF +S ++ AC+   ++    Q+H+ +V+  +E +V   
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y K G  + A  +F ++  +DVVSWN++I     NG   +AI L  +M   G+ 
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           P      ++L AC+ +G    G+++   M+K
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIK 331


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/604 (34%), Positives = 351/604 (58%), Gaps = 24/604 (3%)

Query: 145 KTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
           KT   G D  V  +L++M+A+ GD+ +   V   +    +     ++  Y +     +A 
Sbjct: 175 KTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAV 234

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             FL +     +P+ YT S+M++ C    +   G+QLH+  ++L  +S T VS  L+ MY
Sbjct: 235 ELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMY 294

Query: 264 IKCGM---MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK-PLRLVCLMREDGIDPNE 319
            K  M   ME A  VF+ +   NV+SWTA+I+G+ Q G  E   + L+C M  + I+PN 
Sbjct: 295 TKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNH 354

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T++  L +CA+L +   G   HA+V+K  +   + VG A+V MY+  G + EA+K   +
Sbjct: 355 LTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQ 414

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           + +  + +S ++ I    R+  +       SQ+   D     FT++S+L A + +     
Sbjct: 415 LYER-NLLSTSSDIGETGRSNASWS-----SQIESMDVGVSTFTFASLLSAAATVGLPTK 468

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYS 498
            +Q+H+  +K+ FES+  + +SL+  Y++CG  +DA R F ++    +V+SW S+I A +
Sbjct: 469 GQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALA 528

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++G A +A+ LF  M++ G++P + T++AVLSACSH GLV++G++ F SM K++ ++P  
Sbjct: 529 KHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRM 588

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+CMVDLL R+G ++ AL FI+ +P K  A +W+ L  ACR + ++++ E  ++ +++
Sbjct: 589 EHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVID 648

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+P D A YV LSN+YA  GL  +    R LM+ + +SKE G SW+ V N I+ F + + 
Sbjct: 649 LEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDT 708

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGLI-S 726
           SH    ++Y KL  L+++I+DIG+           +D  KE  +L HSE++AV FGLI +
Sbjct: 709 SHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITT 768

Query: 727 LPAK 730
           LP K
Sbjct: 769 LPTK 772



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/527 (26%), Positives = 249/527 (47%), Gaps = 18/527 (3%)

Query: 135 LGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-DIASCNCLLAG 192
           LGR  H  +  T V   D  V  SL+ MY+KCG +++   V   M  L D+ S   +   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYL 250
             +N    +A     ++    ++PN +T       C  G L     G  L        + 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           +  +V  AL+ M+ + G +  A  VF GLV+R V+ WT +I  + Q G   K + L   M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL--- 367
            EDG +P+ YT +  +++CA   ++ +G   H+ V++ G+     V   +VDMY+ L   
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQME 300

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-EAIEAFSQMVRNDAACDEFTYSS 426
             +  A+K  K M  + + +SW A I+G+ +    E  A+E   +M+      +  TYSS
Sbjct: 301 QSMECARKVFKRM-PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +LKAC+ L    +  QIH+R++K+   +   VG++L+  Y + G  E+A + F QL   +
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN 419

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           ++S +S I    ++  +  + I  E M V G+  +  TF ++LSA +  GL   GQ++  
Sbjct: 420 LLSTSSDIGETGRSNASWSSQI--ESMDV-GV--STFTFASLLSAAATVGLPTKGQQLHA 474

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC--RCHS 604
             +K  G   ++   + +V +  R G L+ A      +        W  + +A     H+
Sbjct: 475 LSIKT-GFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHA 533

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +  ++ F    +  + P+D   Y+ + +  +  GL  + +E  + M+
Sbjct: 534 ERALSLFHDMILSGVKPND-VTYIAVLSACSHVGLVKEGKEYFRSMQ 579



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 187/395 (47%), Gaps = 27/395 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSN-TVPV 106
            C L +   +   L  +  +FNG   +E   +      TR       ++  GC+   V +
Sbjct: 186 GCALIDMFARNGDLVAARKVFNGL--VERTVVVWTLMITR-------YVQGGCAGKAVEL 236

Query: 107 TCYSLESLL--DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
               LE     D   +  ++S C+ +    LG++ H+L+ +  +  D  V+  LV+MY K
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTK 296

Query: 165 CGDIKSM---VAVVKQMPYLDIASCNCLLAGYAK-NALFDQAFSFFLKLDGIDVQPNHYT 220
               +SM     V K+MP  ++ S   L++GY +     + A     ++    ++PNH T
Sbjct: 297 LQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLT 356

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS++L  C +LS  D G+Q+HA+ MK    +   V NAL++MY + G ME+A   F+ L 
Sbjct: 357 YSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLY 416

Query: 281 QRNVISWTAIIN-GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA--LASCASLRNSHM 337
           +RN++S ++ I    + +  +   +        + +D    TFT A  L++ A++     
Sbjct: 417 ERNLLSTSSDIGETGRSNASWSSQI--------ESMDVGVSTFTFASLLSAAATVGLPTK 468

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  IK G      +  ++V MYS  G + +A +   EM    + +SW + I+   
Sbjct: 469 GQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALA 528

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           ++   E A+  F  M+ +    ++ TY ++L ACS
Sbjct: 529 KHGHAERALSLFHDMILSGVKPNDVTYIAVLSACS 563



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 165/380 (43%), Gaps = 23/380 (6%)

Query: 337 MGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +G   H +++   +   D  V  +++ MYS  G +  A++    M      VSW A    
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS---LATCEQIHSRIVKSKF 452
             RN   +EA+    +M+ +    + FT  +   AC   P     ++   +    +K+ F
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC--FPGELFRSSGGTVLGFAIKTGF 178

Query: 453 -ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
             ++V VG +LI+ + + G    A +VF+ L    VV W  MI  Y Q G A KA+ LF 
Sbjct: 179 WGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFL 238

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL---L 568
            M+ +G  P   T  +++SAC+  G    GQ+   S+V   G++ +      +VD+   L
Sbjct: 239 GMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQ-LHSLVLRLGLVSDTCVSCGLVDMYTKL 297

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMA-EFISKQILE-LDPDDAA 625
                +E A      +P       W  L +   +C      A E + + + E ++P+   
Sbjct: 298 QMEQSMECARKVFKRMPTHNVMS-WTALISGYVQCGGQENNAVELLCEMLNESIEPN--- 353

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            ++T S++       +D +  R++     + K    +   V N +   ++++    E  K
Sbjct: 354 -HLTYSSLLKACANLSDQDSGRQI--HARVMKTSIGNVNVVGNALVSMYAESGCMEEARK 410

Query: 686 VYEKL--KQLMQQIEDIGHT 703
            +++L  + L+    DIG T
Sbjct: 411 AFDQLYERNLLSTSSDIGET 430



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 113/253 (44%), Gaps = 30/253 (11%)

Query: 52  FNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSL 111
           F++  +R  LSTS        +I E G S   +S++ +S   G           V+ ++ 
Sbjct: 412 FDQLYERNLLSTSS-------DIGETGRSNASWSSQIESMDVG-----------VSTFTF 453

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            SLL     + + +          G++ HAL  KT    D+ ++ SLV+MY++CG +   
Sbjct: 454 ASLLSAAATVGLPTK---------GQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDA 504

Query: 172 VAVVKQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                +M    ++ S   +++  AK+   ++A S F  +    V+PN  TY  +L+ C  
Sbjct: 505 CRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSH 564

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDA-ESVFEGLVQRNVISWT 288
           +  + EGK+      K   L       A ++ +  + G++++A E + E   + + + W 
Sbjct: 565 VGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWK 624

Query: 289 AIINGFKQHGDYE 301
            ++   + + + E
Sbjct: 625 TLLGACRTYENIE 637


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/629 (32%), Positives = 335/629 (53%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    ++ GR+ HA++ +     D F   +LV+MY K G +     + ++MP  D
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++G   N    +A    L++    + PN +  S++L  C    A D G+Q+H 
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    S   +   L+ MY K   ++DA  VF+ +  R++I W A+I+G    G +++
Sbjct: 235 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 294

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   +R++G+  N  T    L S ASL  +      HA   K G      V   ++D
Sbjct: 295 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y     + +A +  +E   S   ++  + I    +    E AI+ F +M+R     D F
Sbjct: 355 SYWKCSCLSDAIRVFEEC-SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPF 413

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L AC+ L +    +Q+H+ ++K +F S+   G++L+  Y KCGS EDAE  FS L
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               VVSW++MI   +Q+G  ++A+ LF +MV EGI P + T  +VL AC+H+GLV + +
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM + +GI   E HYSCM+DLLGRAGKL+ A+  ++++P +  A +W  L  A R 
Sbjct: 534 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 593

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H D ++ +  ++++  L+P+ +  +V L+N YA +G+  +  + RKLMK   I KEP  S
Sbjct: 594 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           W+EV +K++ F   +KSH    ++Y KL +L   +   G+  N           EKE  +
Sbjct: 654 WVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLL 713

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSERLAV F L+S P        + L 
Sbjct: 714 SHHSERLAVAFALLSTPPGAPIRVKKNLR 742



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 261/544 (47%), Gaps = 17/544 (3%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           +F + V+  C  +   +LG + HA+   T    D FV  +LV MY   G +     V  +
Sbjct: 10  EFALPVVLKCVPDA--QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDE 67

Query: 178 M-PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                +  S N L++ Y KN     A   F ++    +QP  + +S ++  C     ID 
Sbjct: 68  AGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDA 127

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+Q+HA  +++ Y      +NAL+ MY+K G ++ A  +FE +   +V+SW A+I+G   
Sbjct: 128 GRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 187

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G   + + L+  M+  G+ PN +  +  L +CA      +G   H  +IK      D++
Sbjct: 188 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 247

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G  +VDMY+    + +A K    M      + WNA I+G     + +EA   F  + +  
Sbjct: 248 GVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +  T +++LK+ + L + +   Q+H+   K  F  + HV + LI++Y KC    DA 
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAI 366

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF + ++ D+++  SMI A SQ      AI LF +M+ +G+ P      ++L+AC+   
Sbjct: 367 RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 426

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
             + G++V   ++K    + +    + +V    + G +E A +  S+LP +     W  +
Sbjct: 427 AYEQGKQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVS-WSAM 484

Query: 597 FAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYA---EAGLQADAEEQRKLMK 651
                 H   K A E   + + E ++P+    ++T++++      AGL  +A  +R    
Sbjct: 485 IGGLAQHGHGKRALELFGRMVDEGINPN----HITMTSVLCACNHAGLVDEA--KRYFNS 538

Query: 652 MKEI 655
           MKE+
Sbjct: 539 MKEM 542



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 129/241 (53%), Gaps = 3/241 (1%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           MR +G+  NE+   V L  C  + ++ +G   HA  +  G     FV  A+V MY G G 
Sbjct: 1   MRAEGVCCNEFALPVVL-KC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A++   E G   ++VSWN  ++ + +N +  +AI+ F +MV +     EF +S ++ 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+   ++    Q+H+ +V+  +E +V   ++L++ Y K G  + A  +F ++  +DVVS
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I     NG   +AI L  +M   G+ P      ++L AC+ +G    G+++   M+
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 550 K 550
           K
Sbjct: 238 K 238


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 341/605 (56%), Gaps = 8/605 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+     +LG + H    K+    D  +  + ++MYAKC  +     V   +P   
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GYA+     +A   F  L   ++  +  + S  L  C  +    EG QLH 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+N +L MY KCG + +A  +FE + +R+ +SW AII   +Q+ +  K
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M    ++P+++T+   + +CA  +  + G   H ++IK GM L  FVG+A+VD
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVD 484

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G + EA+K    + +  ++VSWN+ I+GF   +++E A   FSQM+      D +
Sbjct: 485 MYGKCGMLMEAEKIHARL-EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNY 543

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY+++L  C+ + ++   +QIH++I+K +  S+V++ S+L++ Y+KCG+ +D+  +F + 
Sbjct: 544 TYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKA 603

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V+W++MI AY+ +G   KAI LFE+M +  ++P ++ F++VL AC+H G V  G 
Sbjct: 604 PKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+ M+  YG+ P+  HYSCMVDLLGR+G++  AL  I ++P +    IWR L + C+ 
Sbjct: 664 HYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKM 723

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             ++++AE     +L+LDP D++ YV L+N+YA  G+  +  + R +MK  ++ KEPGCS
Sbjct: 724 QGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCS 783

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-------DNEKEDRVLYHS 715
           WIEV ++++ F   +K+H    ++YE+   L+ +++  G+        D E E++  Y  
Sbjct: 784 WIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDEEMEEQDPYEG 843

Query: 716 ERLAV 720
            +  V
Sbjct: 844 LKTTV 848



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 290/610 (47%), Gaps = 31/610 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F++ P+R  +S + LIF GY  I   G +++ +    DS P+    D  S    ++
Sbjct: 60  AFKVFDRMPQRDVISWNTLIF-GYAGIGNMGFAQSLF----DSMPE---RDVVSWNSLLS 111

Query: 108 CY-----------------SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           CY                 SL+   D      +L  CS  E   LG + H L  +     
Sbjct: 112 CYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEN 171

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D    ++LV+MY+KC  +     V ++MP  ++   + ++AGY +N  F +    F  + 
Sbjct: 172 DVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            + +  +  TY+++   C  LSA   G QLH   +K  +   + +  A L MY KC  M 
Sbjct: 232 KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMF 291

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF  L      S+ AII G+ +     K L +   ++ + +  +E + + AL +C+
Sbjct: 292 DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            ++    G   H   +K G+     V   I+DMY   G + EA    +EM +   +VSWN
Sbjct: 352 VIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERR-DAVSWN 410

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A IA   +N++  + +  F  M+R+    D+FTY S++KAC+   +L    +IH RI+KS
Sbjct: 411 AIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS 470

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               +  VGS+L++ Y KCG   +AE++ ++L     VSWNS+I  +S   ++  A   F
Sbjct: 471 GMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYF 530

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M+  GI P N T+  VL  C++   ++ G+++   ++K   +  +    S +VD+  +
Sbjct: 531 SQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILK-LQLHSDVYIASTLVDMYSK 589

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDAAVYV 628
            G ++ + +     P K     W  +  A   H   +  +  F   Q+L + P+   +++
Sbjct: 590 CGNMQDSRLMFEKAP-KRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNH-TIFI 647

Query: 629 TLSNMYAEAG 638
           ++    A  G
Sbjct: 648 SVLRACAHMG 657



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 258/560 (46%), Gaps = 40/560 (7%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  CS  + L  G++ H  +  T      +V   L+  Y K   +     V  +MP  
Sbjct: 11  HILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQR 70

Query: 182 DIASCNCLLAGYA-------KNALFD------------------------QAFSFFLKLD 210
           D+ S N L+ GYA         +LFD                        ++   F+++ 
Sbjct: 71  DVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            + +  ++ T++ +L  C  +     G Q+H   +++ + +     +AL+ MY KC  ++
Sbjct: 131 SLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLD 190

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF  + +RN++ W+A+I G+ Q+  + + L+L   M + G+  ++ T+     SCA
Sbjct: 191 DAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA 250

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L    +G   H   +K   A    +GTA +DMY+    +++A K    +       S+N
Sbjct: 251 GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ-SYN 309

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I G+ R  +  +A++ F  + RN+   DE + S  L ACS++       Q+H   VK 
Sbjct: 310 AIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKC 369

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               N+ V +++++ Y KCG+  +A  +F ++   D VSWN++I A+ QN    K + LF
Sbjct: 370 GLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M+   + P + T+ +V+ AC+    +  G ++   ++K  G+  +    S +VD+ G+
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS-GMGLDWFVGSALVDMYGK 488

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD--PDD---AA 625
            G L  A    + L  K T   W  + +        + A+    Q+LE+   PD+   A 
Sbjct: 489 CGMLMEAEKIHARLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547

Query: 626 VYVTLSNMYA-EAGLQADAE 644
           V    +NM   E G Q  A+
Sbjct: 548 VLDVCANMATIELGKQIHAQ 567



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 237/536 (44%), Gaps = 40/536 (7%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+S +L  C +L A++ GKQ+H Q +   ++    V+N LL  Y K   M  A  VF+ +
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 280 VQRNVISWTAIINGFK-------------------------------QHGDYEKPLRLVC 308
            QR+VISW  +I G+                                 +G   K + +  
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MR   I  +  TF V L +C+ + +  +G   H   I+ G       G+A+VDMYS   
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++ +A +  +EM +  + V W+A IAG+ +N +  E ++ F  M++      + TY+S+ 
Sbjct: 188 KLDDAFRVFREMPER-NLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++C+ L +     Q+H   +KS F  +  +G++ ++ Y KC    DA +VF+ L      
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           S+N++I  Y++  +  KA+ +F+ +    +     +    L+ACS      +G ++    
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLA 366

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL-- 606
           VK  G+       + ++D+ G+ G L  A +    +  +  A  W  + AA   + ++  
Sbjct: 367 VK-CGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAAHEQNEEIVK 424

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIE 665
            ++ F+S     ++PDD      +     +  L    E   +++K    +    G + ++
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVD 484

Query: 666 VYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVG 721
           +Y K        K H+ +    EK       I     +  + E+   Y S+ L +G
Sbjct: 485 MYGKCGMLMEAEKIHARLE---EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 32/196 (16%)

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + T+S IL+ CS L +L   +Q+H++++ + F   ++V + L++ Y K      A +VF 
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 481 QLTAADVVSWNSMIKAYS-------------------------------QNGRARKAIIL 509
           ++   DV+SWN++I  Y+                                NG  RK+I +
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +M    I    +TF  +L ACS       G +V   +  + G   +    S +VD+  
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQV-HCLAIQMGFENDVVTGSALVDMYS 184

Query: 570 RAGKLEIALIFISNLP 585
           +  KL+ A      +P
Sbjct: 185 KCKKLDDAFRVFREMP 200


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/631 (33%), Positives = 342/631 (54%), Gaps = 14/631 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    LE GR+ HA++ +T    D F   +LV+MY+K GDI     V  ++P  D
Sbjct: 208 VVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTD 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML--AICGSLSAIDEGKQL 240
           + S N  ++G   +     A    L++    + PN +T S++L         A   G+Q+
Sbjct: 268 VVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQI 327

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K    S   +  AL+ MY K G+++DA  VFE + +++++ W A+I+G    G +
Sbjct: 328 HGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCH 387

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L L C MR++G D N  T    L S ASL         HA   K G      V   +
Sbjct: 388 GESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGL 447

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D Y     +  A K  +E   S + +++ + I    +    E+AI+ F +M+R     D
Sbjct: 448 IDSYWKCNCLRYANKVFEEH-SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPD 506

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            F  SS+L AC+ L +    +Q+H+ ++K KF ++V  G++L+  Y KCGS EDA+  FS
Sbjct: 507 PFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFS 566

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L    VVSW++MI   +Q+G  ++A+ +F +MV E I P + T  +VL AC+H+GLV +
Sbjct: 567 GLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDE 626

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            +  F SM + +GI   E HYSCM+DLLGRAGKL+ A+  ++++P +  A +W  L AA 
Sbjct: 627 AKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAAS 686

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H D ++ +  ++++  L+P+ +  +V L+N YA AG+  +  + RKLMK  ++ KEP 
Sbjct: 687 RVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPA 746

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKED 709
            SW+E+ ++++ F   +KSH     +Y KL++L   +   G+  N           EKE 
Sbjct: 747 MSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKEL 806

Query: 710 RVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + +HSERLAV F LIS PA       + L 
Sbjct: 807 LLSHHSERLAVAFALISTPAGAPIRVKKNLR 837



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 263/540 (48%), Gaps = 13/540 (2%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           +F + ++  C+ +    LG + HA+   T + GD FV  +LV MY   G +     V  +
Sbjct: 103 EFALPIVLKCAPDA--GLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDE 160

Query: 178 MPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                +  S N +++ + KN     A   F ++    V+PN + +S ++  C     ++ 
Sbjct: 161 AARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEA 220

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+++HA  ++  Y      +NAL+ MY K G +  A  VF  + + +V+SW A I+G   
Sbjct: 221 GRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVL 280

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVAL--ASCASLRNSHMGYMFHAQVIKRGMALGD 354
           HG  +  L L+  M+  G+ PN +T +  L   + A      +G   H  +IK      D
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDD 340

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           ++G A+VDMY+  G + +A+K  + + +    + WNA I+G        E++  F +M +
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRK-DLLLWNALISGCSHGGCHGESLSLFCRMRK 399

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
             +  +  T +++LK+ + L +++   Q+H+   K  F S+ HV + LI++Y KC     
Sbjct: 400 EGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRY 459

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF + ++ +++++ SMI A SQ      AI LF +M+ +G+ P      ++L+AC+ 
Sbjct: 460 ANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACAS 519

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
               + G++V   ++K    + +    + +V    + G +E A +  S LP K     W 
Sbjct: 520 LSAYEQGKQVHAHLIKRK-FMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS-WS 577

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA---EAGLQADAEEQRKLMK 651
            +      H   K A  + +++  +D   A  ++TL+++      AGL  +A+     MK
Sbjct: 578 AMIGGLAQHGHGKRALDVFRRM--VDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMK 635



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 217/447 (48%), Gaps = 10/447 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+  +  + L LG   HA + K+ +         L++ Y+KC    S   V  + P   
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDETPDPC 67

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S + L+  Y+ NAL  +A + F  +    V+ N +    +L  C   + +  G Q+HA
Sbjct: 68  HVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL--GVQVHA 124

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDYE 301
             +         V+NAL+ MY   G +++A  VF E    RN +SW  +++ F ++    
Sbjct: 125 VAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCS 184

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             + L   M   G+ PNE+ F+  + +C   R+   G   HA V++ G     F   A+V
Sbjct: 185 DAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALV 244

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMYS LG+I  A     ++ K+   VSWNA I+G   +   + A+E   QM  +    + 
Sbjct: 245 DMYSKLGDIHMAALVFGKVPKT-DVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV 303

Query: 422 FTYSSILK--ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           FT SSILK  A +   + A   QIH  ++K+  +S+ ++G +L++ Y K G  +DA +VF
Sbjct: 304 FTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVF 363

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +   D++ WN++I   S  G   +++ LF +M  EG     +T  AVL + +    + 
Sbjct: 364 EWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAIS 423

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVD 566
           D  +V  ++ ++ G L +    + ++D
Sbjct: 424 DTTQV-HALAEKIGFLSDSHVVNGLID 449



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 3/282 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +++  +  VL   +  E +    + HAL  K     D  V   L++ Y KC  ++    V
Sbjct: 404 INRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKV 463

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            ++    +I +   ++   ++    + A   F+++    ++P+ +  S++L  C SLSA 
Sbjct: 464 FEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAY 523

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           ++GKQ+HA  +K ++++     NAL+  Y KCG +EDA+  F GL  + V+SW+A+I G 
Sbjct: 524 EQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGL 583

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMAL 352
            QHG  ++ L +   M ++ I PN  T T  L +C  A L +   GY F +     G+  
Sbjct: 584 AQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGY-FSSMKEMFGIDR 642

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +   + ++D+    G++ +A + +  M   A++  W A +A
Sbjct: 643 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/532 (36%), Positives = 310/532 (58%), Gaps = 18/532 (3%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TYS ++  C +  A+ EGK++H       Y  K  V N LL MY+K  ++E+AE +F+ +
Sbjct: 57  TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +RNV+SWT +I+ +    + +K L+ + LM  +G+ PN +T++  L +C  L N     
Sbjct: 117 PERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQ-- 173

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +IK G+    FV +A++D+YS   ++  A     EM  +   V WN+ I GF +N
Sbjct: 174 -LHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM-PTRDLVVWNSIIGGFAQN 231

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               EA+  F +M R     D+ T +S+L+AC+ L  L    Q+H  ++K  F+ ++ + 
Sbjct: 232 SDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILN 289

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++LI+ Y KCGS EDA   FS++   DV+SW++M+   +QNG +R+A+ LFE M   G R
Sbjct: 290 NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSR 349

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T L VL ACSH+GLV+ G   F SM K +G+ P   HY C++DLLGRAG+L+ A+ 
Sbjct: 350 PNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVK 409

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            I  +  +P +  WR L  ACR H ++ +A + +K+I+EL+P+DA  Y+ LSN+YA    
Sbjct: 410 LIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQR 469

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             D  E RK M  + I K PGCSWIEV  +I+ F   + SH ++ ++ ++L  L++++  
Sbjct: 470 WEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMG 529

Query: 700 IGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +G+  +           +KED + YHSE+LA+ FGL++L  +      + L 
Sbjct: 530 VGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSREKTVRIRKNLR 581



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 13/397 (3%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E++  CS    ++ G+R H  I         FV  +L+NMY K   ++    +  +MP  
Sbjct: 60  ELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPER 119

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   +++ Y+ N L D+A    + +    V+PN +TYS++L  C  L  +   +QLH
Sbjct: 120 NVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLH 175

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K    S   V +AL+ +Y K   +++A  VF+ +  R+++ W +II GF Q+ D  
Sbjct: 176 CGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGN 235

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M+  G   ++ T T  L +C  L    +G   H  V+K    L   +  A++
Sbjct: 236 EALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDL--ILNNALI 293

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY   G + +A      M +    +SW+  +AG  +N  + +A+E F  M  + +  + 
Sbjct: 294 DMYCKCGSLEDANSAFSRMVEK-DVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNY 352

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF---ESNVHVGSSLIEAYNKCGSWEDAERV 478
            T   +L ACS    L      + R +K  F       H G  LI+   + G  ++A ++
Sbjct: 353 ITVLGVLFACS-HAGLVEKGWYYFRSMKKLFGVDPGREHYG-CLIDLLGRAGRLDEAVKL 410

Query: 479 FSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
             ++    D V+W +++ A   +     AI   +K++
Sbjct: 411 IHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKII 447



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 146/285 (51%), Gaps = 10/285 (3%)

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F    D  + +R +  M   G+  +  T++  +  C++      G   H  +  +G    
Sbjct: 30  FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV   +++MY     + EA+    EM +  + VSW   I+  + N+  ++A++    M 
Sbjct: 90  MFVVNTLLNMYVKFNLLEEAEDLFDEMPER-NVVSWTTMISA-YSNKLNDKALKCLILMF 147

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           R     + FTYSS+L+AC  LP+L    Q+H  I+K+  ES+V V S+LI+ Y+K    +
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLD 204

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +A  VF ++   D+V WNS+I  ++QN    +A+ LF++M   G     +T  +VL AC+
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264

Query: 534 HSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIA 577
              L++ G++V   ++K +  ++   A    ++D+  + G LE A
Sbjct: 265 GLALLELGRQVHVHVLKFDQDLILNNA----LIDMYCKCGSLEDA 305



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 36/244 (14%)

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
           + A F        A+ A   M R+    D  TYS ++K CS   ++   +++H  I    
Sbjct: 26  EFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKG 85

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ--NGRARKAIIL 509
           +E  + V ++L+  Y K    E+AE +F ++   +VVSW +MI AYS   N +A K +IL
Sbjct: 86  YEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLIL 145

Query: 510 FEKMVVEGIRPTNSTFLAVLSACS--------HSGLVQDGQKVFESMVKEYGILPEEAHY 561
              M  EG+RP   T+ +VL AC         H G+++ G    ES V            
Sbjct: 146 ---MFREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTG---LESDV---------FVR 190

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----------LKMAEF 611
           S ++D+  +   L+ AL     +P +    +W  +      +SD          +K A F
Sbjct: 191 SALIDVYSKWSDLDNALGVFDEMPTRDLV-VWNSIIGGFAQNSDGNEALNLFKRMKRAGF 249

Query: 612 ISKQ 615
           ++ Q
Sbjct: 250 LADQ 253



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 6/187 (3%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D+  +  VL  C+    LELGR+ H  + K     D  +  +L++MY KCG ++   +
Sbjct: 250 LADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNNALIDMYCKCGSLEDANS 307

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
              +M   D+ S + ++AG A+N    QA   F  +     +PN+ T   +L  C     
Sbjct: 308 AFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGL 367

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAI 290
           +++G   + ++MK  +       +   L+ +  + G +++A + + E   + + ++W  +
Sbjct: 368 VEKG-WYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTL 426

Query: 291 INGFKQH 297
           +   + H
Sbjct: 427 LGACRVH 433


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/629 (32%), Positives = 348/629 (55%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C+  E    G + H  + K     D F   +L++MYAK G  ++ +AV  ++P  D
Sbjct: 194 VLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPD 253

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N ++AG   +   D A     K+    V P+ +T S+ L  C ++  +  G+QLH+
Sbjct: 254 IVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHS 313

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             MK+     + V   L+ MY KCG+++DA  VF+ +  ++VI W +II+G+   G   +
Sbjct: 314 ALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIE 373

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   M ++G++ N+ T +  L S A  + +      H   IK G     +V  +++D
Sbjct: 374 AMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLD 433

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y G   + E   ++ E+  +   V++ + I  + +    EEA++ + +M   D   D F
Sbjct: 434 SY-GKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAF 492

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            +SS+  AC+ L +    +QIH  ++K    S+V  G+SL+  Y KCGS +DA  +F+++
Sbjct: 493 IFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEI 552

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +   +VSW++MI   +Q+G  RKA+ LF +M+  GI P + T ++VLSAC+H+GLV + +
Sbjct: 553 SWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEAR 612

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  M K +GI P + HY+CMVD+LGR G+L+ A++ +  +P + +A +W  L  A R 
Sbjct: 613 RFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARI 672

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++    ++ +L L+P+ +  ++ L+N+YA  G+  +  + R+ MK   + KEPG S
Sbjct: 673 HKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMS 732

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----TD------NEKEDRV 711
           WIE+ +K+Y F   ++SH    ++Y KL  L +++   G+     TD       EKE  +
Sbjct: 733 WIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLL 792

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSE+LAV FGLI+ P        + L 
Sbjct: 793 WHHSEKLAVAFGLIATPPGAPIRVKKNLR 821



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 254/535 (47%), Gaps = 46/535 (8%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA---------------- 202
           VN+Y+KC   +    +V      D+ S + L++GY +N   ++A                
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 203 FSFFLKLDG------------------------IDVQPNHYTYSTMLAICGSLSAIDEGK 238
           F+F   L G                          + PN ++ ST+L  C  L   + G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H   +KL Y S    +NALL MY K G  E A +VF  + + +++SW A+I G   H 
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             +  L+L+  M    + P+ +T + AL +CA++    +G   H+ ++K  M    FVG 
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++DMYS  G + +A+     M      + WN+ I+G+       EA+  F+ M +    
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLM-PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            ++ T S+ILK+ +   +   CEQ+H+  +KS ++ + +V +SL+++Y KC   EDA +V
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F    A D+V++ SMI AYSQ G   +A+ ++ +M    I+P    F ++ +AC++    
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAY 507

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G+++   ++K  G+L +    + +V++  + G ++ A    + +  +     W  +  
Sbjct: 508 EQGKQIHVHVLK-CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVS-WSAMIG 565

Query: 599 ACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
               H   + A  +  Q+L+  + P+   +   LS     AGL  +A     LM+
Sbjct: 566 GLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSAC-NHAGLVTEARRFFGLME 619



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 81/289 (28%)

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH+RI++       +   +L   Y+KC  +  A ++    +  D+VSW+++I  Y QNGR
Sbjct: 72  IHARIIRLGLLGLRNRLVNL---YSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGR 128

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE-SMVKEY---GILPEE 558
             +A++ + +M + G +    TF +VL  CS +  ++ G+++   ++V E    GI P E
Sbjct: 129 GEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNE 188

Query: 559 AHYS-----------------------------------CMVDLLGRAGKLEIALIFISN 583
              S                                    ++D+  ++G  E A+     
Sbjct: 189 FSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYE 248

Query: 584 LPIKPTAPIWRPLFAACRCH--SDL------KMAEF-----------------------I 612
           +P KP    W  + A C  H  +DL      KM  +                       +
Sbjct: 249 IP-KPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKL 307

Query: 613 SKQI------LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            +Q+      ++++P D+ V V L +MY++ GL  DA     LM  K++
Sbjct: 308 GRQLHSALMKMDMEP-DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDV 355


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/596 (34%), Positives = 336/596 (56%), Gaps = 54/596 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+    L LG + H    KT    D  +  + ++MY KC ++     +   +P  +
Sbjct: 281 VFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHN 340

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GYA++   D+     L LD +       + S     C  +    EG Q+H 
Sbjct: 341 LQSYNAIIVGYARS---DKG----LGLDEV-------SLSGAFRACAVIKGDLEGLQVHG 386

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            +MK    S   V+NA+L MY KCG + +A  VFE +V R+ +SW AII   +Q+G+ EK
Sbjct: 387 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 446

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L                                   H ++IK  + L  FVG A++D
Sbjct: 447 TLSL---------------------------------FIHNRIIKSRLGLDSFVGIALID 473

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A+K L +     + VSWNA I+GF   +++EEA + FS+M+      D F
Sbjct: 474 MYSKCGMMEKAEK-LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNF 532

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY++IL  C+ L ++   +QIH++I+K + +S+ ++ S+L++ Y+KCG+ +D + +F + 
Sbjct: 533 TYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKA 592

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V+WN+M+  Y+Q+G   +A+ +FE M +E ++P ++TFLAVL AC H GLV+ G 
Sbjct: 593 PNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGL 652

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F SM+  YG+ P+  HYSC+VD++GR+G++  AL  I  +P +  A IWR L + C+ 
Sbjct: 653 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKI 712

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  +  IL+L+P+D+A YV LSN+YA AG+  +  + RK+M+   + KEPGCS
Sbjct: 713 HGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 772

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TD---NEKEDRVL 712
           WIE+ ++++ F   +K+H    ++YE L  L  +++ +G+   TD   N+ E R L
Sbjct: 773 WIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDELRSL 828



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 256/576 (44%), Gaps = 53/576 (9%)

Query: 103 TVPVTCYS--LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           T+P++ +S    +   K+    +   CS  + L  G++ HA +  T      FVT  L+ 
Sbjct: 26  TLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQ 85

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA-------LFD------------- 200
           MY KC D++    V   MP  D  S N +L GYA          LFD             
Sbjct: 86  MYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL 145

Query: 201 -----------QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
                      +    FL++  +    +  T++ +L  C SL     G Q+H   +K+ +
Sbjct: 146 ISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGF 205

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                  +ALL MY KC  ++ +   F  + ++N +SW+AII G  Q+ D    L L   
Sbjct: 206 DCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE 265

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M++ G+  ++ TF     SCA L    +G   H   +K        +GTA +DMY     
Sbjct: 266 MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A+K    +  + +  S+NA I G+ R+ K                  DE + S   +
Sbjct: 326 LSDAQKLFNSL-PNHNLQSYNAIIVGYARSDK--------------GLGLDEVSLSGAFR 370

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+++       Q+H   +KS  +SN+ V +++++ Y KCG+  +A  VF ++ + D VS
Sbjct: 371 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 430

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF--LAVLSACSHSGLVQDGQKVFES 547
           WN++I A+ QNG   K + LF    +   R    +F  +A++   S  G+++  +K+ + 
Sbjct: 431 WNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDR 490

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           +  E  ++   A  S    L  ++ + +     +  + + P    +  +   C     ++
Sbjct: 491 LA-EQTVVSWNAIISGF-SLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 548

Query: 608 MAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQAD 642
           + + I  QI++ +   DA +  TL +MY++ G   D
Sbjct: 549 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 584


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/631 (33%), Positives = 328/631 (51%), Gaps = 70/631 (11%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK- 195
           R  H  + K+ V G+ F+  +LV+ YA+ G ++    V   +P  +  S N LL+ YA+ 
Sbjct: 37  RAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARL 96

Query: 196 ------NALFD--------------------------QAFSFFLKLDGIDVQPNHYTYST 223
                  ALF+                           A  F   +   D   N Y++++
Sbjct: 97  GRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFAS 156

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L+ C +   +  G+Q+H    +  +     +  AL+ MY KC    DA  VF+ + +RN
Sbjct: 157 ALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERN 216

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SW ++I  ++Q+G   + L L   M   G  P+E T +  +++CA L     G   HA
Sbjct: 217 VVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHA 276

Query: 344 QVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM---------------GKSASS- 386
            ++KR     D V   A+VDMY+  G  WEA+     M                KSA+  
Sbjct: 277 HMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVE 336

Query: 387 --------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
                         ++WN  IA + +N + EEAI  F Q+ R+      +TY ++L AC 
Sbjct: 337 DAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACG 396

Query: 433 LLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            +  L   +Q H  ++K  F      ES+V VG+SL++ Y K GS +D  +VF ++ A D
Sbjct: 397 NIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD 456

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI  Y+QNGRA+ A+ LFE+M+     P + T + VLSAC HSGLV +G++ F 
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFH 516

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M +++GI P   HY+CMVDLLGRAG L+ A   I ++P +P + +W  L  ACR H ++
Sbjct: 517 FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNV 576

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++ E  + ++ ELDP+++  YV LSNMYAE G  AD    R+ MK + +SK+PGCSWIE+
Sbjct: 577 ELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEI 636

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
            +K+  F +++  H    +++  L+ +  ++
Sbjct: 637 GSKMNVFLARDNRHPCRNEIHSTLRIIQMEM 667



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 45/415 (10%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ E+ L  G + H L+ ++    D  +  +LV+MYAKC        V   MP  ++
Sbjct: 158 LSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNV 217

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N L+  Y +N    +A   F+++      P+  T S++++ C  L+A  EG+Q+HA 
Sbjct: 218 VSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAH 277

Query: 244 TMKLQYLSKTAV-SNALLTMYIKCGM-------------------------------MED 271
            +K   L    V +NAL+ MY KCG                                +ED
Sbjct: 278 MVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVED 337

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A+ VF  +V++NVI+W  +I  + Q+G+ E+ +RL   ++ D I P  YT+   L +C +
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397

Query: 332 LRNSHMGYMFHAQVIKRGMAL------GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           +    +G   H  V+K G           FVG ++VDMY   G I +  K  + M  +  
Sbjct: 398 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-ARD 456

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           +VSWNA I G+ +N + ++A+  F +M+ ++   D  T   +L AC     L    + H 
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACG-HSGLVDEGRRHF 515

Query: 446 RIVKSKF---ESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
             +        S  H  + +++   + G  ++AE +   + T  D V W S++ A
Sbjct: 516 HFMTEDHGITPSRDHY-TCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 569



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 200/429 (46%), Gaps = 72/429 (16%)

Query: 218 HYTYSTMLA-ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           H   S+ LA +  S  ++   +  H   +K     +T + N L++ Y + G + +A  VF
Sbjct: 16  HLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVF 75

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEK---------------------------------P 303
           +G+  RN  S+ A+++ + + G  ++                                  
Sbjct: 76  DGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDA 135

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LR +  M  D    N Y+F  AL++CA+ ++   G   H  V +   A    +GTA+VDM
Sbjct: 136 LRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDM 195

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+      +A++    M +  + VSWN+ I  + +N    EA+  F +M+      DE T
Sbjct: 196 YAKCERPVDARRVFDAMPER-NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVT 254

Query: 424 YSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCG-SW--------- 472
            SS++ AC+ L +     Q+H+ +VK  +   ++ + ++L++ Y KCG +W         
Sbjct: 255 LSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSM 314

Query: 473 ---------------------EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
                                EDA+ VFSQ+   +V++WN +I AY+QNG   +AI LF 
Sbjct: 315 PSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFV 374

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE---YGILPEEAHY--SCMVD 566
           ++  + I PT+ T+  VL+AC +  ++Q GQ+    ++KE   +   PE   +  + +VD
Sbjct: 375 QLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 434

Query: 567 LLGRAGKLE 575
           +  + G ++
Sbjct: 435 MYLKTGSID 443



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 50/333 (15%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCG-------- 166
           D+  +  V+S C+       GR+ HA ++ +  +  D  +  +LV+MYAKCG        
Sbjct: 251 DEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCI 310

Query: 167 -----------------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
                                  +++    V  QM   ++ + N L+A YA+N   ++A 
Sbjct: 311 FDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAI 370

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL------SKTAVSN 257
             F++L    + P HYTY  +L  CG+++ +  G+Q H   +K  +       S   V N
Sbjct: 371 RLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGN 430

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+ MY+K G ++D   VFE +  R+ +SW A+I G+ Q+G  +  L L   M     +P
Sbjct: 431 SLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENP 490

Query: 318 NEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           +  T    L++C      H G +      FH      G+       T +VD+    G + 
Sbjct: 491 DSVTMIGVLSACG-----HSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLK 545

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           EA++ +K+M     SV W A + G  R  K  E
Sbjct: 546 EAEELIKDMPTEPDSVLW-ASLLGACRLHKNVE 577


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/616 (32%), Positives = 347/616 (56%), Gaps = 14/616 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           ++ HA + KT    D  +T +++   A      I   +++   +   + ++ N ++ G A
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
                D A   F K+    VQ + +T+S++L  C  + A+ EG+Q+HA  +K  + S   
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEF 157

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N L+ MY  CG +  A  VF+G+ +R++++W ++++G+ ++G +++ ++L   + E  
Sbjct: 158 VENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELR 217

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I+ ++ T    L +C  L N  +G +    ++ +G+   + + T+++DMY+  G++  A+
Sbjct: 218 IEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTAR 277

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K   EM K    V+W+A I+G+ +  + +EA+  F +M + +   +E T  S+L +C++L
Sbjct: 278 KLFDEMDKR-DVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAML 336

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +  T + +H  I K K +  V +G+ LI+ Y KCG  + +  VF +++  +V +W ++I
Sbjct: 337 GAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALI 396

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           +  + NG  + A+  F  M+   ++P + TF+ VLSACSH+ LV  G+ +F SM +++ I
Sbjct: 397 QGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDI 456

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY CMVD+LGRAG LE A  FI N+P  P A +WR L A+CR H +++MAE   +
Sbjct: 457 EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            I  L+P  +  Y+ LSN YA  G   DA   R L+K KEI K PGCS IE+   ++ FF
Sbjct: 517 HITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFF 576

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFG 723
           S++  H    ++++ L ++M+QI+ +G+  N            KE  V +HSE+LA+ +G
Sbjct: 577 SEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETSVSHHSEKLAIAYG 636

Query: 724 LISLPAKNKFECSRTL 739
           LI    +     S+ L
Sbjct: 637 LIRTSPRTTIRISKNL 652



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 11/444 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     VL  CSR + L  G + HALI K+    ++FV  +L+ MYA CG I     V 
Sbjct: 120 DKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVF 179

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP   I + N +L+GY KN L+D+    F K+  + ++ +  T  ++L  CG L+ ++
Sbjct: 180 DGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLE 239

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+ +    +         ++ +L+ MY KCG ++ A  +F+ + +R+V++W+A+I+G+ 
Sbjct: 240 IGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYA 299

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q    ++ L L   M++  + PNE T    L SCA L     G   H  + K+ M L   
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVT 359

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +GT ++D Y+  G I  + +  KEM    +  +W A I G   N + + A+E FS M+ N
Sbjct: 360 LGTQLIDFYAKCGYIDRSVEVFKEMS-FKNVFTWTALIQGLANNGEGKMALEFFSSMLEN 418

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWED 474
           D   ++ T+  +L ACS    +     + + + +    E  +     +++   + G  E+
Sbjct: 419 DVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEE 478

Query: 475 AERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMV--VEGIRPTNSTFLAVLSA 531
           A +    +    + V W +++ +     RA K I + EK +  +  + P +S    +LS 
Sbjct: 479 AYQFIDNMPFPPNAVVWRTLLAS----CRAHKNIEMAEKSLEHITRLEPAHSGDYILLSN 534

Query: 532 C-SHSGLVQDGQKVFESMVKEYGI 554
             +  G V+D  +V  S++KE  I
Sbjct: 535 TYALVGRVEDAIRV-RSLIKEKEI 557


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 311/572 (54%), Gaps = 1/572 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     +  G   H    KT +    FV ++L++MY K G I     V  +MP  ++ S 
Sbjct: 126 CGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             ++ G  +     +A  +F ++    V+ + YT++  L  C    A++ G+++HAQ MK
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMK 245

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +   + V+N L TMY KCG +E   ++FE +  R+V+SWT II    Q G  E  ++ 
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              MRE  + PNEYTF   ++ CA+L     G   HA ++  G+A    V  +I+ MY+ 
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G++  +     EM +    VSW+  IAG+ +     EA E  S M        EF  +S
Sbjct: 366 CGQLTSSSVIFHEMTRR-DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALAS 424

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L AC  +  L   +Q+H+ ++    E    V S+LI  Y KCGS E+A R+F      D
Sbjct: 425 VLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDD 484

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +VSW +MI  Y+++G +R+ I LFEK+   G+RP + TF+ VLSACSH+GLV  G + F 
Sbjct: 485 IVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFN 544

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +M K+Y I P + HY CM+DLL RAG+L  A   I  +P      +W  L  ACR H D+
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           +     +++IL+L+P+ A  ++TL+N+YA  G   +A + RKLMK K + KEPG SWI+V
Sbjct: 605 ERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKV 664

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            + ++ F + ++SH +   +Y  L  L  + E
Sbjct: 665 KDLVFAFVAGDRSHPQGEDIYNMLDLLASRTE 696



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 10/389 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  GR  HA   K       FV  +L  MY KCG ++  + + ++M   D+
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   ++    +    + A   F+++   DV PN YT++ +++ C +L+ I+ G+QLHA 
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            + L   +  +V N+++TMY KCG +  +  +F  + +R+++SW+ II G+ Q G   + 
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEA 403

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
             L+  MR +G  P E+     L++C ++     G   HA V+  G+     V +A+++M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G I EA + + +  ++   VSW A I G+  +  + E I+ F ++ R     D  T
Sbjct: 464 YCKCGSIEEASR-IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVT 522

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFE---SNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +  +L ACS    L      +   +  K++   S  H G  +I+   + G   DAE +  
Sbjct: 523 FIGVLSACS-HAGLVDLGFRYFNAMSKKYQISPSKEHYG-CMIDLLCRAGRLSDAEHMIE 580

Query: 481 QLT-AADVVSWNSMIKAYSQNG---RARK 505
            +    D V W+++++A   +G   R R+
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRR 609



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 180/334 (53%), Gaps = 5/334 (1%)

Query: 244 TMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           +  + ++S+T +  SN  L   +K G + +A  +F+ + Q++ ISWT +I+G+    D  
Sbjct: 38  SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSS 97

Query: 302 KPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + L L   MR E G+  + +  ++A  +C    + + G + H   +K G+    FVG+A+
Sbjct: 98  EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+  G+I+E ++   EM    + VSW A I G  R    +EA+  FS+M R+    D
Sbjct: 158 LDMYTKNGKIFEGRRVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYD 216

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            +T++  LKAC+   +L    +IH++ +K  F+ +  V ++L   YNKCG  E    +F 
Sbjct: 217 SYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFE 276

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +++  DVVSW ++I    Q G+   A+  F +M    + P   TF AV+S C++   ++ 
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           G+++  +++   G+    +  + ++ +  + G+L
Sbjct: 337 GEQL-HALILHLGLAASLSVENSIMTMYAKCGQL 369



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 143/271 (52%), Gaps = 5/271 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C+    +E G + HALI    +     V  S++ MYAKCG + S   +  +M   D
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 183 IASCNCLLAGYAKNALFDQAFSF--FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           I S + ++AGY++     +AF    +++++G   +P  +  +++L+ CG+++ ++ GKQL
Sbjct: 384 IVSWSTIIAGYSQGGHVSEAFELLSWMRMEG--PKPTEFALASVLSACGNMAILEHGKQL 441

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  + +       V +AL+ MY KCG +E+A  +F+     +++SWTA+ING+ +HG  
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTA 359
            + + L   +   G+ P+  TF   L++C+      +G+  F+A   K  ++        
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           ++D+    G + +A+  ++ M      V W+
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 372 EAKKQLKEMGKSA---------------SSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRN 415
           E+ KQLKE+ K+                  +SW   I+G+     + EA+  F  M V +
Sbjct: 51  ESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVES 110

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D F  S   KAC L   +   E +H   VK+   ++V VGS+L++ Y K G   + 
Sbjct: 111 GLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEG 170

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF ++   +VVSW ++I    + G  ++A++ F +M    +   + TF   L AC+ S
Sbjct: 171 RRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADS 230

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G +  G+++    +K+ G        + +  +  + GKLE  L     + ++
Sbjct: 231 GALNYGREIHAQAMKK-GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMR 281


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/643 (31%), Positives = 355/643 (55%), Gaps = 23/643 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAV 174
           D    +  +  CS  + L+ G+  HA+I +T +   D  +  +L+ MYA+C D++     
Sbjct: 57  DGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKT 116

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICG 229
             +M    + + N L+AGY++N     A   +  +     +G+  +P+  T+S+ L  C 
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM--KPDAITFSSALYACT 174

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            +  I +G+++ A+T+   Y S + V NAL+ MY KCG +E A  VF+ L  R+VI+W  
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+G+ + G   + L L   M  +   PN  TF   L +C +L +   G   H +V + G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 +G  +++MY+      E  +Q+ E  ++   ++WN  I  + +  + ++A++ F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM   + A +E T S++L AC++L +    + +H+ I   + +++V + +SL+  YN+C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           GS +D   VF+ +    +VSW+++I AY+Q+G +R  +  F +++ EG+   + T ++ L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH G++++G + F SMV ++G+ P+  H+ CMVDLL RAG+LE A   I ++P  P 
Sbjct: 475 SACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT-LSNMYAEAGLQADAEEQRK 648
           A  W  L + C+ H+D K A  ++ ++ EL+ +D    VT LSN+YAEAG   D    RK
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RK 591

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
               +   K PGCS+IE+ + ++ F + +KSH E   +  ++K+L +Q++D G+      
Sbjct: 592 TRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651

Query: 704 ------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                 + EKE  + YHSE+LA+ +GLIS P        + L 
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLR 694



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 243/478 (50%), Gaps = 10/478 (2%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCG +   +AV   + + +  S   ++A +A+N  + +A  ++ ++    ++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGL 279
           +   + +C S   + +G+ LHA  ++ + L     +  AL+TMY +C  +E A   F+ +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLM---REDGIDPNEYTFTVALASCASLRNSH 336
            ++ +++W A+I G+ ++GD+   L++   M     +G+ P+  TF+ AL +C  + +  
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G    A+ +  G A    V  A+++MYS  G +  A+K    + K+   ++WN  I+G+
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL-KNRDVIAWNTMISGY 239

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +     +A+E F +M  ND   +  T+  +L AC+ L  L     IH ++ +  +ES++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 457 HVGSSLIEAYNKC-GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
            +G+ L+  Y KC  S E+A +VF ++   DV++WN +I AY Q G+A+ A+ +F++M +
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           E + P   T   VLSAC+  G  + G+ V  +++       +    + ++++  R G L+
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAV-HALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 576 IALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
             +   + +  K     W  L AA     HS   +  F       L  DD  +  TLS
Sbjct: 419 DTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCGS  DA  VF  +   + VSW  ++ A+++NG  R+A+  + +MV+EG+RP  + F
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 526 LAVLSACSHSGLVQDGQ----KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           +  +  CS S  ++ GQ     + E+ + E+ I+   A    ++ +  R   LE+A    
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTA----LITMYARCRDLELARKTF 117

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMA-----EFISKQILELDPDDAAVYVTLSNMYAE 636
             +  K T   W  L A    + D + A     + +SK    + PD     +T S+    
Sbjct: 118 DEMG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPD----AITFSSALYA 172

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
             +  D  + R++      S     S ++  N +   +S+  S     KV+++LK 
Sbjct: 173 CTVVGDISQGREIEARTVASGYASDSIVQ--NALINMYSKCGSLESARKVFDRLKN 226


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/643 (31%), Positives = 355/643 (55%), Gaps = 23/643 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAV 174
           D    +  +  CS  + L+ G+  HA+I +T +   D  +  +L+ MYA+C D++     
Sbjct: 57  DGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKT 116

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICG 229
             +M    + + N L+AGY++N     A   +  +     +G+  +P+  T+S+ L  C 
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGM--KPDAITFSSALYACS 174

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            +  I +G+++ A+T+   Y S + V NAL+ MY KCG +E A  VF+ L  R+VI+W  
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+G+ + G   + L L   M  +   PN  TF   L +C +L +   G   H +V + G
Sbjct: 235 MISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 +G  +++MY+      E  +Q+ E  ++   ++WN  I  + +  + ++A++ F
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM   + A +E T S++L AC++L +    + +H+ I   + +++V + +SL+  YN+C
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           GS +D   VF+ +    +VSW+++I AY+Q+G +R  +  F +++ EG+   + T ++ L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH G++++G + F SMV ++G+ P+  H+ CMVDLL RAG+LE A   I ++P  P 
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT-LSNMYAEAGLQADAEEQRK 648
           A  W  L + C+ H+D K A  ++ ++ EL+ +D    VT LSN+YAEAG   D    RK
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDV---RK 591

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
               +   K PGCS+IE+ + ++ F + +KSH E   +  ++K+L +Q++D G+      
Sbjct: 592 TRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651

Query: 704 ------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                 + EKE  + YHSE+LA+ +GLIS P        + L 
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLR 694



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 244/478 (51%), Gaps = 10/478 (2%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCG +   +AV   + + +  S   ++A +A+N  + +A  ++ ++    ++P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGL 279
           +   + +C S   + +G+ LHA  ++ Q L     +  AL+TMY +C  +E A   F+ +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLM---REDGIDPNEYTFTVALASCASLRNSH 336
            ++ +++W A+I G+ ++GD+   L++   M     +G+ P+  TF+ AL +C+ + +  
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G    A+ +  G A    V  A+++MYS  G +  A+K    + K+   ++WN  I+G+
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRL-KNRDVIAWNTMISGY 239

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +     +A+E F +M  ND   +  T+  +L AC+ L  L     IH ++ +  +ES++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 457 HVGSSLIEAYNKC-GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
            +G+ L+  Y KC  S E+A +VF +L   DV++WN +I AY Q G+A+ A+ +F++M +
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           E + P   T   VLSAC+  G  + G+ V  +++       +    + ++++  R G L+
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAV-HALIASGRCKADVVLENSLMNMYNRCGSLD 418

Query: 576 IALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
             +   + +  K     W  L AA     HS   +  F       L  DD  +  TLS
Sbjct: 419 DTVGVFAAIRDKSLVS-WSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCGS  DA  VF  +   + VSW  ++ A+++NG  R+A+  + +MV+EG+RP  + F
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 526 LAVLSACSHSGLVQDGQ----KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           +  +  CS S  ++ GQ     + E+ + E+ I+   A    ++ +  R   LE+A    
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTA----LITMYARCRDLELARKTF 117

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMA-----EFISKQILELDPDDAAVYVTLSNMYAE 636
             +  K T   W  L A    + D + A     + +SK    + PD     +T S+    
Sbjct: 118 DEMG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPD----AITFSSALYA 172

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
             +  D  + R++      S     S ++  N +   +S+  S     KV+++LK 
Sbjct: 173 CSVVGDISQGREIEARTVASGYASDSIVQ--NALINMYSKCGSLESARKVFDRLKN 226


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/572 (35%), Positives = 310/572 (54%), Gaps = 1/572 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     +  G   H    KT +    FV ++L++MY K G I     V  +MP  ++ S 
Sbjct: 126 CGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSW 185

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             ++ G  +     +A  +F ++    V+ + YT++  L  C    A++ G+++HAQ MK
Sbjct: 186 TAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMK 245

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +   + V+N L TMY KCG +E   ++FE +  R+V+SWT II    Q G  E  ++ 
Sbjct: 246 KGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQA 305

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              MRE  + PNEYTF   ++ CA+L     G   HA ++  G+A    V  +I+ MY+ 
Sbjct: 306 FIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAK 365

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G++  +     EM +    VSW+  IAG+ +     EA E  S M        EF  +S
Sbjct: 366 CGQLTSSSVIFHEMTRR-DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALAS 424

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L AC  +  L   +Q+H+ ++    E    V S+LI  Y KCGS E+A R+F      D
Sbjct: 425 VLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDD 484

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +VSW +MI  Y+++G +R+ I LFEK+   G+RP + TF+ VLSACSH+GLV  G   F 
Sbjct: 485 IVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFN 544

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +M K+Y I P + HY CM+DLL RAG+L  A   I  +P      +W  L  ACR H D+
Sbjct: 545 AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDV 604

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           +     +++IL+L+P+ A  ++TL+N+YA  G   +A + RKLMK K + KEPG SWI+V
Sbjct: 605 ERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKV 664

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            + ++ F + ++SH +   +Y  L  L  + E
Sbjct: 665 KDLVFAFVAGDRSHPQGEDIYNMLDLLASRTE 696



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 191/389 (49%), Gaps = 10/389 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  GR  HA   K       FV  +L  MY KCG ++  + + ++M   D+
Sbjct: 224 LKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDV 283

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   ++    +    + A   F+++   DV PN YT++ +++ C +L+ I+ G+QLHA 
Sbjct: 284 VSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHAL 343

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            + L   +  +V N+++TMY KCG +  +  +F  + +R+++SW+ II G+ Q G   + 
Sbjct: 344 ILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEA 403

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
             L+  MR +G  P E+     L++C ++     G   HA V+  G+     V +A+++M
Sbjct: 404 FELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINM 463

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G I EA + + +  ++   VSW A I G+  +  + E I+ F ++ R     D  T
Sbjct: 464 YCKCGSIEEASR-IFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVT 522

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFE---SNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +  +L ACS    L      +   +  K++   S  H G  +I+   + G   DAE +  
Sbjct: 523 FIGVLSACS-HAGLVDLGFHYFNAMSKKYQISPSKEHYG-CMIDLLCRAGRLSDAEHMIE 580

Query: 481 QLT-AADVVSWNSMIKAYSQNG---RARK 505
            +    D V W+++++A   +G   R R+
Sbjct: 581 AMPFHRDDVVWSTLLRACRVHGDVERGRR 609



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 180/334 (53%), Gaps = 5/334 (1%)

Query: 244 TMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           +  + ++S+T +  SN  L   +K G + +A  +F+ + Q++ ISWT +I+G+    D  
Sbjct: 38  SQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSS 97

Query: 302 KPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + L L   MR E G+  + +  ++A  +C    + + G + H   +K G+    FVG+A+
Sbjct: 98  EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+  G+I+E ++   EM    + VSW A I G  R    +EA+  FS+M R+    D
Sbjct: 158 LDMYTKNGKIFEGRRVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYD 216

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            +T++  LKAC+   +L    +IH++ +K  F+ +  V ++L   YNKCG  E    +F 
Sbjct: 217 SYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFE 276

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +++  DVVSW ++I    Q G+   A+  F +M    + P   TF AV+S C++   ++ 
Sbjct: 277 KMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEW 336

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           G+++  +++   G+    +  + ++ +  + G+L
Sbjct: 337 GEQL-HALILHLGLAASLSVENSIMTMYAKCGQL 369



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 142/271 (52%), Gaps = 5/271 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C+    +E G + HALI    +     V  S++ MYAKCG + S   +  +M   D
Sbjct: 324 VISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRD 383

Query: 183 IASCNCLLAGYAKNALFDQAFSF--FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           I S + ++AGY +     +AF    +++++G   +P  +  +++L+ CG+++ ++ GKQL
Sbjct: 384 IVSWSTIIAGYXQGGHVSEAFELLSWMRMEG--PKPTEFALASVLSACGNMAILEHGKQL 441

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  + +       V +AL+ MY KCG +E+A  +F+     +++SWTA+ING+ +HG  
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTA 359
            + + L   +   G+ P+  TF   L++C+      +G+  F+A   K  ++        
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           ++D+    G + +A+  ++ M      V W+
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWS 592



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 372 EAKKQLKEMGKSA---------------SSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRN 415
           E+ KQLKE+ K+                  +SW   I+G+     + EA+  F  M V +
Sbjct: 51  ESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVES 110

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D F  S   KAC L   +   E +H   VK+   ++V VGS+L++ Y K G   + 
Sbjct: 111 GLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEG 170

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF ++   +VVSW ++I    + G  ++A++ F +M    +   + TF   L AC+ S
Sbjct: 171 RRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADS 230

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G +  G+++    +K+ G        + +  +  + GKLE  L     + ++
Sbjct: 231 GALNYGREIHAQAMKK-GFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMR 281


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/589 (33%), Positives = 327/589 (55%), Gaps = 47/589 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F   ++++ Y+K G+++ + AV  QM   D  S N ++AG++ N    QA  FF+++ 
Sbjct: 88  DVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQ 147

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +   YT+ ++L  C  L  I  GKQ+H + +         V NAL  MY KCG ++
Sbjct: 148 EEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F+ +V +NV+SW ++I+G+ Q+G  E   +L C M+  G+ P++ T +  L++  
Sbjct: 208 QARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSA-- 265

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                            Y   G I EA K  +E+ K    V W 
Sbjct: 266 ---------------------------------YFQCGYIDEACKTFREI-KEKDKVCWT 291

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             + G  +N K E+A+  F +M+  +   D FT SS++ +C+ L SL   + +H + V  
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             + ++ V S+L++ Y+KCG   DA  VF ++   +V+SWNSMI  Y+QNG+  +A+ L+
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E+M+ E ++P N TF+ VLSAC H+GLV+ GQ  F S+ K +G+ P   HYSCM++LLGR
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGR 471

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG ++ A+  I ++  +P   IW  L + CR + D+   E  ++ + ELDP +A  Y+ L
Sbjct: 472 AGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIML 531

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+YA  G   D    R LMK  +I K    SWIE+ N++++F +++++HSE  ++YE+L
Sbjct: 532 SNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEEL 591

Query: 691 KQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
            +L++++++ G T           + EK D + YHSE+LA+ F LI  P
Sbjct: 592 NRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKP 640



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 94/185 (50%), Gaps = 3/185 (1%)

Query: 111 LESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE++    F I  V+S C+R   L  G+  H       V  D  V+++LV+MY+KCG+  
Sbjct: 315 LENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETA 374

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               V K+M   ++ S N ++ GYA+N    +A + + ++   +++P++ T+  +L+ C 
Sbjct: 375 DAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACM 434

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLV-QRNVISW 287
               ++ G+       K+  ++ T    + ++ +  + G M+ A  + + +  + N + W
Sbjct: 435 HAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIW 494

Query: 288 TAIIN 292
           + +++
Sbjct: 495 STLLS 499


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 338/620 (54%), Gaps = 19/620 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GRR H    K     + FV ASL++MY++ G      ++   MP+ D+ S N +++G  +
Sbjct: 234 GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293

Query: 196 NALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           N    QA      ++L+GI +  N  T  ++L +C  L  I     +H   +K       
Sbjct: 294 NGNAAQALDVLDEMRLEGIKM--NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            VSNAL+ MY K G +EDA   F+ +   +V+SW +II  ++Q+ D          M+ +
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWE 372
           G  P+  T     +  A  R+       H  +++RG  + D V G A+VDMY+ LG +  
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKAC 431
           A K   E+      +SWN  I G+ +N    EAIE +  M    +   ++ T+ SIL A 
Sbjct: 472 AHKVF-EIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + + +L    +IH R++K+    +V V + LI+ Y KCG   DA  +F Q+     V+WN
Sbjct: 531 AHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I  +  +G A K + LF +M+ EG++P + TF+++LSACSHSG V++G+  F  M +E
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QE 649

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P   HY CMVDLLGRAG LE+A  FI ++P++P A IW  L  ACR H ++++ +F
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKF 709

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            S ++ E+D  +   YV LSN+YA  G     ++ R L + + + K PG S IEV  K+ 
Sbjct: 710 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 769

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
            F++ N+SH +  ++YE+L+ L  +++ +G+            ++EKE  +  HSERLA+
Sbjct: 770 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAI 829

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FG+IS P K+     + L 
Sbjct: 830 AFGIISTPPKSPIRIFKNLR 849



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 273/554 (49%), Gaps = 19/554 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D  F+ +  +     +CL      HAL+         F++  LVN+YA  GD+      
Sbjct: 120 IDFNFLFDSSTKTPFAKCL------HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT 173

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSA 233
             Q+P  D+ + N +++ Y  N  F +A   F +L  + +++P+ YT+  +L  CG+L  
Sbjct: 174 FDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV- 232

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +G+++H    KL +     V+ +L+ MY + G    A S+F+ +  R++ SW A+I+G
Sbjct: 233 --DGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G+  + L ++  MR +GI  N  T    L  C  L +     + H  VIK G+   
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  A+++MY+  G + +A+K  ++M  +   VSWN+ IA + +N     A   F +M 
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSW 472
            N    D  T  S+    +          +H  I++  +   +V +G+++++ Y K G  
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSA 531
           + A +VF  +   DV+SWN++I  Y+QNG A +AI +++ M   + I P   T++++L A
Sbjct: 470 DSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            +H G +Q G ++   ++K   +  +    +C++D+ G+ G+L  A+     +P + ++ 
Sbjct: 530 YAHVGALQQGMRIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSV 587

Query: 592 IWRPLFAACRCHSDL-KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            W  + +    H    K  +   + + E    D   +V+L +  + +G   + +   +LM
Sbjct: 588 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 647

Query: 651 K---MKEISKEPGC 661
           +   +K   K  GC
Sbjct: 648 QEYGIKPSLKHYGC 661



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/182 (20%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L   +    L+ G R H  + KT +  D FV   L+++Y KCG +   +++  Q+P 
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
               + N +++ +  +   ++    F ++    V+P+H T+ ++L+ C     ++EGK  
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
                +            ++ +  + G +E A    + + +Q +   W A++   + HG+
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGN 703

Query: 300 YE 301
            E
Sbjct: 704 IE 705



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +E  ++ +  + +  P  A C  +H+ +V +    ++ + + L+  Y   G    +   F
Sbjct: 118 EEIDFNFLFDSSTKTP-FAKC--LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTF 174

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAI-ILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            Q+   DV +WNSMI AY  NG   +AI   ++ ++V  IRP   TF  VL AC   G +
Sbjct: 175 DQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 231

Query: 539 QDGQKV 544
            DG+++
Sbjct: 232 VDGRRI 237


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 219/634 (34%), Positives = 353/634 (55%), Gaps = 24/634 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C   + L  GR+ H  + K     D FV ASL++MY++ G +    ++   MP+ D
Sbjct: 181 VLKAC---QTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRD 237

Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + S N +++G  +N    QA      ++L+GI++  +  T +++L +C  L  I     +
Sbjct: 238 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGINM--DSVTVASILPVCAQLGDISTATLI 295

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K     +  VSNAL+ MY K G + DA+ VF+ +  R+V+SW +II  ++Q+ D 
Sbjct: 296 HLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDP 355

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASL-RNSHMGYMFHAQVIKRGMAL-GDFVGT 358
                    M+ +G++P+  T  V+LAS A+  R+       H  +++RG  +    +G 
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTL-VSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN 414

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDA 417
           A++DMY+ LG I  A K    +      VSWN  I+G+ +N    EAIE +  M    + 
Sbjct: 415 AVMDMYAKLGVIDSAHKVFNLI-PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREI 473

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T+ SIL A + + +L    +IH  ++K+    +V VG+ LI+ Y KCG   DA  
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMC 533

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F Q+     V WN++I  +  +G   KA+ LF +M  EG++P + TF+++LSACSHSGL
Sbjct: 534 LFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGL 593

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G+  F  M +EYGI P   HY CMVDLLGRAG LE+A  FI ++P+ P A IW  L 
Sbjct: 594 VDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H ++++ +F S ++ E+D ++   YV LSN+YA  G     ++ R L + + + K
Sbjct: 653 GACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK 712

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
            PG S IEV  ++  F++ N+SH +  ++Y +L+ L  +++ +G+            ++E
Sbjct: 713 TPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDE 772

Query: 707 KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           KE  +  HSERLA+ FG+IS P K+     + L 
Sbjct: 773 KEHILTSHSERLAIAFGIISTPPKSAIRIFKNLR 806



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/535 (26%), Positives = 266/535 (49%), Gaps = 15/535 (2%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           L +R HAL+  +      F++  LVN+YA  GD+        Q+   D+ + N +++ Y 
Sbjct: 91  LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150

Query: 195 KNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           +N  F +A   F +L  +   Q + YT+  +L  C +L    +G+++H    KL +    
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDV 207

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V+ +L+ MY + G +  A S+F+ +  R++ SW A+I+G  Q+G+  + L ++  MR +
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           GI+ +  T    L  CA L +     + H  VIK G+    FV  A+++MY+  G + +A
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +K  ++M      VSWN+ IA + +N     A   F +M  N    D  T  S+    + 
Sbjct: 328 QKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQ 386

Query: 434 LPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
                    +H  I++  +    V +G+++++ Y K G  + A +VF+ +   DVVSWN+
Sbjct: 387 SRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNT 446

Query: 493 MIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +I  Y+QNG A +AI ++  M     I+    T++++L+A +H G +Q G ++   ++K 
Sbjct: 447 LISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT 506

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMA 609
             +  +    +C++DL G+ G+L  A+     +P + + P W  + +      H +  + 
Sbjct: 507 -NLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP-WNAIISCHGIHGHGEKALK 564

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK---MKEISKEPGC 661
            F   Q   + PD    +++L +  + +GL  + +    LM+   +K   K  GC
Sbjct: 565 LFREMQDEGVKPDHVT-FISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGC 618



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 159/320 (49%), Gaps = 3/320 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  +L  C++   +      H  + K  +  + FV+ +L+NMYAK G++     V
Sbjct: 271 MDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKV 330

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +QM   D+ S N ++A Y +N     A  FF K+    ++P+  T  ++ +I       
Sbjct: 331 FQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDY 390

Query: 235 DEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              + +H   M+  +L +  V  NA++ MY K G+++ A  VF  +  ++V+SW  +I+G
Sbjct: 391 KNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISG 450

Query: 294 FKQHGDYEKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           + Q+G   + + +  +M E   I  N+ T+   LA+ A +     G   H  +IK  + L
Sbjct: 451 YTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FVGT ++D+Y   G + +A     ++ +  SSV WNA I+    +   E+A++ F +M
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIISCHGIHGHGEKALKLFREM 569

Query: 413 VRNDAACDEFTYSSILKACS 432
                  D  T+ S+L ACS
Sbjct: 570 QDEGVKPDHVTFISLLSACS 589



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 85/188 (45%), Gaps = 1/188 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++   + +L+  +    L+ G R H  + KT +  D FV   L+++Y KCG +   + +
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCL 534

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             Q+P       N +++ +  +   ++A   F ++    V+P+H T+ ++L+ C     +
Sbjct: 535 FYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLV 594

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           DEGK       +            ++ +  + G +E A    + + +  +   W A++  
Sbjct: 595 DEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGA 654

Query: 294 FKQHGDYE 301
            + HG+ E
Sbjct: 655 CRIHGNIE 662


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/636 (32%), Positives = 341/636 (53%), Gaps = 19/636 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C    CL      H    K  +  D FV+ +LVN+Y+KCG ++    +   M   D
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 248

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--GSLSAIDEGKQL 240
           +   N +L GY +  L  +AF  F +     ++P+ ++   +L  C       ++ GKQ+
Sbjct: 249 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQV 308

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K    S  +V+N+L+ MY K G    A  VF  +   ++ISW ++I+   Q    
Sbjct: 309 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 368

Query: 301 EKPLRLVCLMREDGIDPNEYTF-TVALAS----CASLRNSHMGYMFHAQVIKRGMALGDF 355
           E+ + L   +  +G+ P+ +T  ++ LA+    C  L     G   HA  IK G      
Sbjct: 369 EESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 428

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V + I+DMY   G++  A      +  +   V+W + I+G   N   ++A+  + +M ++
Sbjct: 429 VNSGILDMYIKCGDMVNAGIVFNYI-SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQS 487

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               DE+T+++++KA S + +L    Q+H+ ++K    S+  VG+SL++ Y KCG+ EDA
Sbjct: 488 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 547

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            R+F ++   ++  WN+M+   +Q+G A +A+ LF+ M   GI P   +F+ +LSACSH+
Sbjct: 548 YRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 607

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL  +  +   SM  +YGI PE  HYSC+VD LGRAG ++ A   I  +P K +A I R 
Sbjct: 608 GLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 667

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  ACR   D++  + ++ ++  L+P D+A YV LSN+YA A    D  + RK+MK K +
Sbjct: 668 LLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 727

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K+PG SWI+V N ++ F   ++SH +   +Y+K++++M+ I + G+            D
Sbjct: 728 KKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVED 787

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            EKE  + YHSE+LA+ +GLIS PA       + L 
Sbjct: 788 EEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLR 823



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/527 (25%), Positives = 256/527 (48%), Gaps = 18/527 (3%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LG+  HA I  +   GD F++ +L+ MY+KCG + S   V    P  D+ + N +L  
Sbjct: 93  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152

Query: 193 YA-----KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           YA      +    +    F  L          T + +L +C +   +   + +H   +K+
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKI 212

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                  VS AL+ +Y KCG M DA  +F+ + +R+V+ W  ++ G+ Q G  ++  +L 
Sbjct: 213 GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLF 272

Query: 308 CLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
                 G+ P+E++  + L  C  A   +  +G   H   +K G+     V  ++V+MYS
Sbjct: 273 SEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 332

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            +G  + A++   +M K    +SWN+ I+   ++   EE++  F  ++      D FT +
Sbjct: 333 KMGCAYFAREVFNDM-KHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLA 391

Query: 426 SIL-----KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           SI      KAC  L  L   +QIH+  +K+ F+S++HV S +++ Y KCG   +A  VF+
Sbjct: 392 SITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 451

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            ++A D V+W SMI     NG   +A+ ++ +M    + P   TF  ++ A S    ++ 
Sbjct: 452 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 511

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++  +++K    + +    + +VD+  + G +E A      + ++  A +W  +    
Sbjct: 512 GRQLHANVIK-LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA-LWNAMLVGL 569

Query: 601 RCHSDLKMAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
             H + + A   F S +   ++PD  + ++ + +  + AGL ++A E
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVS-FIGILSACSHAGLTSEAYE 615



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 9/254 (3%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +  S  N  +G   HA+++  G A   F+   ++ MYS  G +  A+ Q+ +      
Sbjct: 84  LRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSAR-QVFDTTPERD 142

Query: 386 SVSWNAQIAGFF-----RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            V+WNA +  +       +   +E +  F  +  +  +    T + +LK C     L   
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           E +H   +K   E +V V  +L+  Y+KCG   DA  +F  +   DVV WN M+K Y Q 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL--VQDGQKVFESMVKEYGILPEE 558
           G  ++A  LF +    G+RP   +   +L+ C  +G   ++ G++V    VK  G+  + 
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKS-GLDSDV 321

Query: 559 AHYSCMVDLLGRAG 572
           +  + +V++  + G
Sbjct: 322 SVANSLVNMYSKMG 335


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/623 (33%), Positives = 346/623 (55%), Gaps = 11/623 (1%)

Query: 115 LDKQFV-IEVLSY-CSREECLEL-----GRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
           +DK  V + + SY C  E C EL     GR  H  +          +   ++ MY +CG 
Sbjct: 72  MDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGS 131

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++    +  +M  L+  S   +++ YA+  L D+A   F ++     +P    Y+T+L  
Sbjct: 132 LEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKS 191

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
             +  A+D G+Q+HA  ++    S  ++   ++ MY+KCG +  A+ VF+ +  +  ++W
Sbjct: 192 LVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAW 251

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T ++ G+ Q G     L+L   +  +G++ + + F+V L +CASL     G   HA V K
Sbjct: 252 TGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAK 311

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+     VGT +VD Y        A +  +E+ +  + VSW+A I+G+ +  + EEA++
Sbjct: 312 LGLECEVSVGTPLVDFYIKCSSFESACRAFQEI-REPNDVSWSAIISGYCQMSQFEEAVK 370

Query: 408 AFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            F  +  +N    + FTY+SI +ACS+L       Q+H+  +K     + +  S+LI  Y
Sbjct: 371 TFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMY 430

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           +KCG  +DA  VF  +   D+V+W + I  ++  G A +A+ LFEKMV  G++P + TF+
Sbjct: 431 SKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 490

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           AVL+ACSH+GLV+ G+   ++M+++Y + P   HY CM+D+  R+G L+ AL F+ N+P 
Sbjct: 491 AVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPF 550

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           +P A  W+   + C  H +L++ +   +++ +LDP+D A YV   N+Y  AG   +A E 
Sbjct: 551 EPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEV 610

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE-DIGHTD- 704
            KLM  + + KE  CSWI+   KI+RF   +K H +  ++YEKLK+    +E D+     
Sbjct: 611 MKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFDGFMEGDMFQCSM 670

Query: 705 NEKEDRVLYHSERLAVGFGLISL 727
            E+ +++L HSERLA+ FGLIS+
Sbjct: 671 TERREQLLDHSERLAIAFGLISV 693



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 3/392 (0%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N  L   +K+   ++AF FF ++D   V  + Y+Y  +   C  L ++  G+ LH +   
Sbjct: 50  NLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRM 109

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                   + N +L MY +CG +EDA+ +F+ +   N +S T +I+ + + G  +K + L
Sbjct: 110 GIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGL 169

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M E G  P    +T  L S  + R   +G   HA VI+ G+     + T IV+MY  
Sbjct: 170 FSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVK 229

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  AK+   +M      V+W   + G+ +  +  +A++ F  ++      D F +S 
Sbjct: 230 CGWLVGAKRVFDQMA-VKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSV 288

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +LKAC+ L  L   +QIH+ + K   E  V VG+ L++ Y KC S+E A R F ++   +
Sbjct: 289 VLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 348

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKVF 545
            VSW+++I  Y Q  +  +A+  F+ +  +     NS T+ ++  ACS       G +V 
Sbjct: 349 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVH 408

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              +K   ++  +   S ++ +  + G L+ A
Sbjct: 409 ADAIKR-SLIGSQYGESALITMYSKCGCLDDA 439


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/701 (31%), Positives = 374/701 (53%), Gaps = 40/701 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN-DSFPDGFIDDGCSNTVPV 106
           A ++F   P+R  +S + +I          G S NG+   + ++F +  +  G  + VP 
Sbjct: 155 AVKVFEHMPERNLVSWNSIIC---------GFSENGFLQESFNAFREMLV--GEESFVP- 202

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    D   ++ VL  C+ EE +E G   H L  K  +  +  V  SL++MY+KC 
Sbjct: 203 ---------DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCR 253

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--VQPNHYTYSTM 224
            +     +  +    +I S N ++ GYA+     + F    K+   D  ++ + +T   +
Sbjct: 254 FLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNV 313

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L +C   S +   K+LH  + +    S   V+NA +  Y +CG +  +E VF+ +  + V
Sbjct: 314 LPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTV 373

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
            SW A++ G+ Q+ D  K L L   M + G+DP+ +T    L +C+ +++ H G   H  
Sbjct: 374 SSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGF 433

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            ++ G+A+  F+G +++ +Y   G+ + A+     M +  S VSWN  IAG+ +N   +E
Sbjct: 434 ALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDE 492

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           AI  F QM+ +     E     +  ACS L +L   +++H   +K+    ++ V SS+I+
Sbjct: 493 AINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIID 552

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y K G    ++R+F +L   DV SWN +I  Y  +GR ++A+ LFEKM+  G++P + T
Sbjct: 553 MYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFT 612

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F  +L ACSH+GLV+DG + F  M+  + I P+  HY+C+VD+LGRAG+++ AL  I  +
Sbjct: 613 FTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEM 672

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P  P + IW  L ++CR H +L + E ++ ++LEL+P+    YV +SN++A +G   D  
Sbjct: 673 PGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVR 732

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT- 703
             R  MK   + K+ GCSWIEV  K++ F   ++   E+ +V E  ++L  +I  IG+T 
Sbjct: 733 RVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTP 792

Query: 704 -------DNEKEDRVLY---HSERLAVGFGLIS----LPAK 730
                  D E+ED++     HSE+LA+ FGL++    LP +
Sbjct: 793 DTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVR 833



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 217/428 (50%), Gaps = 7/428 (1%)

Query: 123 VLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C + + +E+GRR H +++  T  C D  +   ++ MY+ CG       V  ++   
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++   N +++ Y +N LF+ A S F +L  + + +P+++T   ++  C  L  +  G+ +
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H    K+  +S   V NAL+ MY KCG++E+A  VFE + +RN++SW +II GF ++G  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 301 EKPLRLV--CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           ++        L+ E+   P+  T    L  CA   +   G   H   +K G+     V  
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA- 417
           +++DMYS    + EA + L +     + VSWN+ I G+ R +          +M   DA 
Sbjct: 244 SLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 418 -ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              DEFT  ++L  C     L + +++H    +   +SN  V ++ I AY +CG+   +E
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF  +    V SWN+++  Y+QN   RKA+ L+ +M   G+ P   T  ++L ACS   
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422

Query: 537 LVQDGQKV 544
            +  G+++
Sbjct: 423 SLHYGEEI 430



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 7/265 (2%)

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGK 382
           V L +C   ++  +G   H  V        DFV  T I+ MYS  G   +++    ++ +
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL-R 61

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLPSLATCE 441
             +   WNA ++ + RN+  E+A+  FS+++   +   D FT   ++KAC+ L  L   +
Sbjct: 62  RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            IH    K    S+V VG++LI  Y KCG  E+A +VF  +   ++VSWNS+I  +S+NG
Sbjct: 122 IIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENG 181

Query: 502 RARKAIILFEKMVV--EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
             +++   F +M+V  E   P  +T + VL  C+    ++ G  V    VK  G+  E  
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK-LGLNEELM 240

Query: 560 HYSCMVDLLGRAGKL-EIALIFISN 583
             + ++D+  +   L E  L+F  N
Sbjct: 241 VNNSLIDMYSKCRFLSEAQLLFDKN 265


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/620 (34%), Positives = 338/620 (54%), Gaps = 19/620 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ H    K     + FV ASL++MY++ G      ++   MP+ D+ S N +++G  +
Sbjct: 234 GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293

Query: 196 NALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           N    QA      ++L+GI +  N  T  ++L +C  L  I     +H   +K       
Sbjct: 294 NGNAAQALDVLDEMRLEGIKM--NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            VSNAL+ MY K G +EDA   F+ +   +V+SW +II  ++Q+ D          M+ +
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWE 372
           G  P+  T     +  A  R+       H  +++RG  + D V G A+VDMY+ LG +  
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKAC 431
           A K   E+      +SWN  I G+ +N    EAIE +  M    +   ++ T+ SIL A 
Sbjct: 472 AHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAY 530

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + + +L    +IH R++K+    +V V + LI+ Y KCG   DA  +F Q+     V+WN
Sbjct: 531 AHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWN 590

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I  +  +G A K + LF +M+ EG++P + TF+++LSACSHSG V++G+  F  M +E
Sbjct: 591 AIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QE 649

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P   HY CMVDLLGRAG LE+A  FI ++P++P A IW  L  ACR H ++++ +F
Sbjct: 650 YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKF 709

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            S ++ E+D  +   YV LSN+YA  G     ++ R L + + + K PG S IEV  K+ 
Sbjct: 710 ASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVD 769

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
            F++ N+SH +  ++YE+L+ L  +++ +G+            ++EKE  +  HSERLA+
Sbjct: 770 VFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAI 829

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FG+IS P K+     + L 
Sbjct: 830 AFGIISTPPKSPIRIFKNLR 849



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 273/554 (49%), Gaps = 19/554 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D  F+ +  +     +CL      HAL+         F++  LVN+YA  GD+      
Sbjct: 120 IDFNFLFDSSTKTPFAKCL------HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT 173

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSA 233
             Q+P  D+ + N +++ Y  N  F +A   F +L  + +++P+ YT+  +L  CG+L  
Sbjct: 174 FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV- 232

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +G+++H    KL +     V+ +L+ MY + G    A S+F+ +  R++ SW A+I+G
Sbjct: 233 --DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 290

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G+  + L ++  MR +GI  N  T    L  C  L +     + H  VIK G+   
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  A+++MY+  G + +A+K  ++M  +   VSWN+ IA + +N     A   F +M 
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSW 472
            N    D  T  S+    +          +H  I++  +   +V +G+++++ Y K G  
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSA 531
           + A +VF  +   DV+SWN++I  Y+QNG A +AI +++ M   + I P   T++++L A
Sbjct: 470 DSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPA 529

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            +H G +Q G K+   ++K   +  +    +C++D+ G+ G+L  A+     +P + ++ 
Sbjct: 530 YAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSV 587

Query: 592 IWRPLFAACRCHSDL-KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            W  + +    H    K  +   + + E    D   +V+L +  + +G   + +   +LM
Sbjct: 588 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 647

Query: 651 K---MKEISKEPGC 661
           +   +K   K  GC
Sbjct: 648 QEYGIKPSLKHYGC 661



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +E  ++ +  + +  P  A C  +H+ +V +    ++ + + L+  Y   G    +   F
Sbjct: 118 EEIDFNFLFDSSTKTP-FAKC--LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTF 174

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAI-ILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            Q+   DV +WNSMI AY  NG   +AI   ++ ++V  IRP   TF  VL AC   G +
Sbjct: 175 DQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 231

Query: 539 QDGQKV 544
            DG+K+
Sbjct: 232 VDGRKI 237



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/182 (19%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L   +    L+ G + H  + KT +  D FV   L+++Y KCG +   +++  Q+P 
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
               + N +++ +  +   ++    F ++    V+P+H T+ ++L+ C     ++EGK  
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
                +            ++ +  + G +E A    + + +Q +   W A++   + HG+
Sbjct: 644 FRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 703

Query: 300 YE 301
            E
Sbjct: 704 IE 705


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/628 (32%), Positives = 328/628 (52%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L+ G+  H  +  +    + F    +VNMYAKC  I     +  +MP  D
Sbjct: 36  LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERD 95

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +++GYA+N     A    L++     +P+  T  ++L        +  G  +H 
Sbjct: 96  LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  + S   VS AL+ MY KCG +  A  +F+G+  R V+SW ++I+G+ Q GD E 
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M ++G+ P   T   AL +CA L +   G   H  V +  +     V  +++ 
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    +  A    K + ++ + VSWNA I G+ +N    EA+ AF +M   +   D F
Sbjct: 276 MYSKCKRVDIAADIFKNL-RNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSF 334

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S++ A + L      + IH  +++   + NV V ++L++ Y KCG+   A ++F  +
Sbjct: 335 TMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMM 394

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A  V++WN+MI  Y  +G  + ++ LF++M    I+P + TFL  LSACSHSGLV++G 
Sbjct: 395 NARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGL 454

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             FESM K+YGI P   HY  MVDLLGRAG+L  A  FI  +PIKP   ++  +  AC+ 
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKI 514

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++ + E  + +I +L+PDD   +V L+N+YA A +     + R +M+   + K PGCS
Sbjct: 515 HKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCS 574

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ F+S   SH +  K+Y  L+ L+ +I   G+           D+ K   + 
Sbjct: 575 LVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLN 634

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ FGL++          + L 
Sbjct: 635 THSEKLAIAFGLLNTSTGTPIHIRKNLR 662



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 4/390 (1%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +L GYAK++  D A SFF ++    V+P  Y ++ +L +CG  S +  GK++H   +   
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           +         ++ MY KC  + DA ++F+ + +R+++ W  +I+G+ Q+G  +  L LV 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M E+G  P+  T    L + A  R   +G   H  V++ G      V TA+VDMYS  G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            +  A+     M    + VSWN+ I G+ ++   E A+  F +M+         T    L
Sbjct: 181 SVSIARVIFDGM-DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC+ L  L   + +H  + + K +S+V V +SLI  Y+KC   + A  +F  L    +V
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN+MI  Y+QNG   +A+  F +M    I+P + T ++V+ A +   + +  + +   +
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 549 VKEYGILPEEAH-YSCMVDLLGRAGKLEIA 577
           ++ +  L +     + +VD+  + G +  A
Sbjct: 360 IRRF--LDKNVFVMTALVDMYAKCGAIHTA 387


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/605 (34%), Positives = 341/605 (56%), Gaps = 26/605 (4%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  V ++L++M A+ GD+ S   V   +    +     L++ Y +    ++A   FL   
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-- 268
               +P+ YT S+M++ C  L ++  G QLH+  +++   S   VS  L+ MY K  +  
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306

Query: 269 -MEDAESVFEGLVQRNVISWTAIINGFKQHGDYE-KPLRLVCLMREDGIDPNEYTFTVAL 326
            M+ A  VFE + + +VISWTA+I+G+ Q G  E K + L   M  + I PN  T++  L
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            SCAS+ +   G   HA VIK   A    VG A+V MY+  G + EA++   ++ +  S 
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER-SM 425

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           +    +   F  + +          +VR D      T++S++ A + +  L   +Q+H+ 
Sbjct: 426 IPCITEGRDFPLDHR----------IVRMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +K+ F S+  V +SL+  Y++CG  EDA R F++L   +V+SW SMI   +++G A +A
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF  M++ G++P + T++AVLSACSH GLV++G++ F SM +++G++P   HY+CMVD
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LL R+G ++ AL FI+ +P+K  A +W+ L  ACR H ++++ E  +K ++EL+P D A 
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAP 655

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           YV LSN+YA+AGL  +    R  M+   ++KE G SW+EV N  + F + + SH     +
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715

Query: 687 YEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGLISLPAKNKFEC 735
           Y KL  L++QI+ +G+           +D  KE  +L HSE++AV FGLI+  A      
Sbjct: 716 YGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775

Query: 736 SRTLE 740
            + L 
Sbjct: 776 FKNLR 780



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 166/321 (51%), Gaps = 15/321 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM---V 172
           D+  +  ++S C+    + LG + H+L  +  +  D  V+  LV+MYAK    ++M    
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYAN 312

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            V ++MP  D+ S   L++GY ++ +  ++  + F ++    ++PNH TYS++L  C S+
Sbjct: 313 KVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASI 372

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S  D G+Q+HA  +K    S   V NAL++MY + G ME+A  VF  L +R++I    I 
Sbjct: 373 SDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI--PCIT 430

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G     D+    R+V   R D +  +  TF   +++ AS+     G   HA  +K G  
Sbjct: 431 EGR----DFPLDHRIV---RMD-VGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFG 482

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FV  ++V MYS  G + +A +   E+ K  + +SW + I+G  ++   E A+  F  
Sbjct: 483 SDRFVSNSLVSMYSRCGYLEDACRSFNEL-KDRNVISWTSMISGLAKHGYAERALSLFHD 541

Query: 412 MVRNDAACDEFTYSSILKACS 432
           M+      ++ TY ++L ACS
Sbjct: 542 MILTGVKPNDVTYIAVLSACS 562



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 17/326 (5%)

Query: 237 GKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGF 294
           G+ LH + ++   L + AV +N+LLT+Y +CG +  A +VF+G+   R+++SWTA+ +  
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI-----KRG 349
            ++G     L L+  M E G+ PN YT   A  +C      H  Y     V+     K G
Sbjct: 127 ARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACF----PHELYCLVGGVVLGLVHKMG 182

Query: 350 MALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           +   D  VG+A++DM +  G++  A+K    + +  + V W   I+ + + +  EEA+E 
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEK-TVVVWTLLISRYVQGECAEEAVEL 241

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F   + +    D +T SS++ AC+ L S+    Q+HS  ++    S+  V   L++ Y K
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK 301

Query: 469 CG---SWEDAERVFSQLTAADVVSWNSMIKAYSQNG-RARKAIILFEKMVVEGIRPTNST 524
                + + A +VF ++   DV+SW ++I  Y Q+G +  K + LF +M+ E I+P + T
Sbjct: 302 SNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHIT 361

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVK 550
           + ++L +C+       G++V   ++K
Sbjct: 362 YSSILKSCASISDHDSGRQVHAHVIK 387



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 91/172 (52%), Gaps = 4/172 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G++ HA+  K     D+FV+ SLV+MY++CG ++       ++   ++ S   +++G
Sbjct: 466 LTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--L 250
            AK+   ++A S F  +    V+PN  TY  +L+ C  +  + EGK+ + ++M+  +  +
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDHGLI 584

Query: 251 SKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +      ++ +  + G++++A E + E  ++ + + W  ++   + H + E
Sbjct: 585 PRMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIE 636



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 443 IHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQN 500
           +H R+++    + +  V +SL+  Y++CG+   A  VF  +    D+VSW +M    ++N
Sbjct: 70  LHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARN 129

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-A 559
           G  R +++L  +M+  G+ P   T  A   AC    L      V   +V + G+   + A
Sbjct: 130 GAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVA 189

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             S ++D+L R G L  A      L I+ T  +W  L +
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLIS 227


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/637 (32%), Positives = 352/637 (55%), Gaps = 15/637 (2%)

Query: 118 QFVIEVLSYCSREECLELGRRYHA--LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +  I++L   +  + L+ G+  HA  +IT  A   +     SL+N+YAKC  I     + 
Sbjct: 26  EHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILF 85

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAI 234
             M   ++ S   L+AGY  N L  +    F  +  +D ++PN Y ++T+++ C     +
Sbjct: 86  DGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQV 145

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EG Q H   +K   +    V NAL+ MY +   ++ A SV+  +   +V S+  IING 
Sbjct: 146 VEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGL 205

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            ++G   + L ++  M ++ I  +  T+  A   C+ L++  +G   H ++ + G     
Sbjct: 206 LENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDS 265

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV +AI+DMY   G I  A+K    + ++ + VSW A +A + +N   EEA+  F +M  
Sbjct: 266 FVSSAIIDMYGKCGNILNARKVFNRL-QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEV 324

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    +E+T++ +L +C+ + +L   + +H+RI KS FE ++ VG++LI  Y+K GS E 
Sbjct: 325 DGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEA 384

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF ++   D ++W++MI   S +G  R+A+++F++M+     P   TF+ VLSAC+H
Sbjct: 385 AHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAH 444

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            G VQ+G      ++K+ GI P   HY+C+V LL +AG+L+ A  F+ + P+K     WR
Sbjct: 445 LGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWR 504

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L +AC  H +  + + +++ +L++DP D   Y+ LSNMYA+A       + RKLM+ + 
Sbjct: 505 TLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERN 564

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
           + KEPG SWIE+ N I+ F S+ K+H E  ++YEK+++L+  I  +G+            
Sbjct: 565 VKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVE 624

Query: 704 DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           D +K + V YHSE+LA+ +GL+  P+       + L 
Sbjct: 625 DEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLR 661



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 18/331 (5%)

Query: 73  NIEEKGISRNGYSTRNDSFPDGFIDDGC--SNTVPVTCYSLESLLDKQFVIEVLSYCSRE 130
           NI   G+  NGY +      D  +D+     N   VT + L               CS  
Sbjct: 199 NIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGL---------------CSHL 243

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           + L LG + H  + +T    D FV++++++MY KCG+I +   V  ++   ++ S   +L
Sbjct: 244 KDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAIL 303

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           A Y++N  F++A +FF +++   + PN YT++ +L  C  +SA+  GK LH +  K  + 
Sbjct: 304 AAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFE 363

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
               V NAL+ MY K G +E A  VF  ++ R+ I+W+A+I G   HG   + L +   M
Sbjct: 364 DHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEM 423

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGE 369
                 P+  TF   L++CA L +   G+ +  Q++K+ G+  G    T IV +    G 
Sbjct: 424 LAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGR 483

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           + EA+  +K        V+W   ++    +Q
Sbjct: 484 LDEAENFMKSTPVKWDVVAWRTLLSACHVHQ 514


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/568 (35%), Positives = 322/568 (56%), Gaps = 1/568 (0%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            G++ HA+  K A   D FV +SL+NMY K G +     V  +MP  +  +   +++GYA
Sbjct: 129 FGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYA 188

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
              L  +AF  F  +   +   N + ++++L+       +D GKQ+H   +K   L   +
Sbjct: 189 IQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLS 248

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           + NAL+TMY KCG ++D+  VFE    +N I+W+A+I G+ Q GD  K L+L   M   G
Sbjct: 249 ILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAG 308

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I+P+E+T    L +C+       G   H  ++K G     ++ TA+VDMY+  G   +A+
Sbjct: 309 INPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDAR 368

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K    + +    V W + IAG+ +N + E+A+  + +M       +E T +S+LKACS L
Sbjct: 369 KGFNYL-QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNL 427

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +     QIH+R +K      V +GS+L   Y KCG+ E+   VF ++   D++SWN+MI
Sbjct: 428 AAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMI 487

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              SQNG  ++A+ LFE+M  +  +P + TF+ VLSACSH GLV  G   F  M  E+G+
Sbjct: 488 SGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGL 547

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           LP+  HY+CMVD+L RAGKL  A  FI +  I     +WR L  ACR + + ++  +  +
Sbjct: 548 LPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGE 607

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           +++EL   +++ YV LS +Y   G   D E  R +MK++ +SKEPGCSWIE+ + ++ F 
Sbjct: 608 KLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFV 667

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
             ++ H  + ++  ++ +L +Q++D G+
Sbjct: 668 VGDQMHPCIGEIRTEILRLSKQMKDEGY 695



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 257/509 (50%), Gaps = 8/509 (1%)

Query: 128 SREECLELGRRYHALITKTAVCGD-QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           + ++ L+ GR  HA I K A      ++  SL+N YAKC  +     V  ++   D+ S 
Sbjct: 18  THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISW 77

Query: 187 NCLLAGYAKNALFDQAF--SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           NCL+ GY++      +F    F ++   ++ PN +T+S +     +LS+I  G+Q HA  
Sbjct: 78  NCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVA 137

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           +K+       V ++LL MY K G++ +A  VF+ + +RN ++W  +I+G+       +  
Sbjct: 138 IKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAF 197

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
            +  LMR +  D NE+ FT  L++ A       G   H   +K G+ +   +  A+V MY
Sbjct: 198 EVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMY 257

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           +  G + +   Q+ EM    +S++W+A I G+ ++  + +A++ FS+M        EFT 
Sbjct: 258 AKCGSL-DDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTL 316

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
             +L ACS   ++   +Q+H+ ++K  FES +++ ++L++ Y K G  EDA + F+ L  
Sbjct: 317 VGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQ 376

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            D+V W SMI  Y QNG    A+ L+ +M +EGI P   T  +VL ACS+      G+++
Sbjct: 377 PDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQI 436

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
               +K YG+  E    S +  +  + G LE   I    +P +     W  + +    + 
Sbjct: 437 HARTIK-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIIS-WNAMISGLSQNG 494

Query: 605 DLKMAEFISKQILELD--PDDAAVYVTLS 631
             K A  + +++ + D  PDD      LS
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLS 523



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 138/257 (53%), Gaps = 1/257 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+ CS    +E G++ H  + K       ++  +LV+MYAK G  +        + 
Sbjct: 316 LVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQ 375

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+     ++AGY +N   + A S + ++    + PN  T +++L  C +L+A D+G+Q
Sbjct: 376 QPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQ 435

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA+T+K     +  + +AL TMY KCG +E+   VF  + +R++ISW A+I+G  Q+G 
Sbjct: 436 IHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGY 495

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ L L   MR+    P++ TF   L++C+ +     G+++   +      L      A
Sbjct: 496 GKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYA 555

Query: 360 -IVDMYSGLGEIWEAKK 375
            +VD+ S  G+++EAK+
Sbjct: 556 CMVDVLSRAGKLYEAKE 572


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 199/580 (34%), Positives = 319/580 (55%), Gaps = 1/580 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+ E   E G + H L+       D  V  +LV MY+K G +   + +   MP  +
Sbjct: 79  VLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTN 138

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++AG+ +N   D+A   F ++    V P+  T+++ L      +++ +GK++H 
Sbjct: 139 VVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHG 198

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++        + +AL+ +Y KC  +  A  +F+     +++  TAII+G+  +G    
Sbjct: 199 YILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNND 258

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   + E+ + PN  T    L +CA L   ++G   HA ++K G+     VG+AI+D
Sbjct: 259 ALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMD 318

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A +  + M +   +V WNA I    +N K +EAI+ F QM R   + D  
Sbjct: 319 MYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCV 377

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + S+ L AC+ LP+L   + IHS ++K  F+S V   S+LI+ Y KCG+   A  VF  +
Sbjct: 378 SISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMM 437

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + VSWNS+I AY  +G    ++ LF KM+ +GI+P + TFL +LSAC H+G V  G 
Sbjct: 438 REKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGI 497

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  M +EYGI     HY+C+VDL GRAG+L  A   I N+P  P   +W  L  ACR 
Sbjct: 498 QYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRV 557

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  S+ +L+LDP+++  YV LSN++A+AG      + R LMK + + K PG S
Sbjct: 558 HGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYS 617

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           WIEV    + F + + SH E  ++Y  L  L+ ++   G+
Sbjct: 618 WIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGY 657



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 244/484 (50%), Gaps = 7/484 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+FV +SL+ +YA+ G I+    +  +MP  D    N +L G+ K    + A   F  + 
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +PN  T++++L+IC S +  + G QLH   +   +     V+NAL+ MY K G + 
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  +F  +   NV++W  +I GF Q+G  ++   L   M   G+ P+  TF   L S  
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              +   G   H  +++ G+AL  F+ +A++D+Y    ++  A K  K+   +   V   
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ-STNVDIVVCT 244

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+G+  N    +A+E F  ++    + +  T +S+L AC+ L +L   +++H+ I+K 
Sbjct: 245 AIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             +   HVGS++++ Y KCG  + A ++F ++   D V WN++I   SQNG+ ++AI LF
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLG 569
            +M  EG+     +  A LSAC++   +  G+ +   M+K  G    E    S ++D+ G
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK--GAFDSEVFAESALIDMYG 422

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVY 627
           + G L +A      +  K     W  + AA   H  L+++  +  ++LE  + PD     
Sbjct: 423 KCGNLSVARCVFDMMREKNEVS-WNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFL 481

Query: 628 VTLS 631
             LS
Sbjct: 482 TILS 485



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 4/202 (1%)

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F  +  VGSSLI+ Y + G  EDA R+F ++   D V WN M+  + + G    A+ +FE
Sbjct: 3   FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFE 62

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M     +P + TF +VLS C+   L + G ++   +V   G   +    + +V +  + 
Sbjct: 63  DMRNCQTKPNSITFASVLSICASEALSEFGNQL-HGLVISCGFHFDPLVANALVAMYSKF 121

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVT 629
           G+L  AL   + +P       W  + A    +  +  A  +  +++   + PD       
Sbjct: 122 GQLSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 630 LSNMYAEAGLQADAEEQRKLMK 651
           L ++   A L+   E    +++
Sbjct: 181 LPSVTESASLKQGKEIHGYILR 202


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/761 (29%), Positives = 394/761 (51%), Gaps = 68/761 (8%)

Query: 24  EQVKPKKCNHRKTVEVKEPFASYS-ACQLFNKSPKRAGLSTSDLIFNGY------MNIEE 76
           E  +P    H   +       S S A +LF + P R  +++ + I +GY      +N  +
Sbjct: 86  EITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTR-DVASWNTIMSGYYQSGQFLNALD 144

Query: 77  KGISRNGYSTRNDSFPDGFIDDGCS---------NTVPVTCYSLESLLDKQ-------FV 120
             +S        DS P+ F   GC          + V +    L S  D Q        +
Sbjct: 145 IFVSMR---QTGDSLPNAFTF-GCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTAL 200

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C   +     +++  +   T +C +  +       YAK   +   + + K MP 
Sbjct: 201 VDMLVRCGAMDFAS--KQFSRIKNPTIICRNSMLVG-----YAKSHGVDHALEIFKSMPE 253

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N +++  +K+    +A    + + G  V+P+  TY++ L  C  LS+++ GKQL
Sbjct: 254 RDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQL 313

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q ++        V++A++ +Y KCG  ++A+ VF  L  RN +SWT +I GF Q+G +
Sbjct: 314 HVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCF 373

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG----------- 349
            + + L   MR + +  +++     ++ C +  +  +G   H+  +K G           
Sbjct: 374 SESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSL 433

Query: 350 -------------------MALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                              MA  D V  T ++  YS +G I +A++   +M  + + ++W
Sbjct: 434 ISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDM-STRNVITW 492

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           NA +  + ++   E+ ++ +S M+   D   D  TY ++ + C+ + +    +QI    V
Sbjct: 493 NAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTV 552

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K     +  V +++I  Y+KCG   +A + F  L+  D+VSWN+MI  YSQ+G  ++AI 
Sbjct: 553 KVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIE 612

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F+ ++ +G +P   +++AVLS CSHSGLV++G+  F+ M +++ I P   H+SCMVDLL
Sbjct: 613 IFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLL 672

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  A   I  +P+KPTA +W  L +AC+ H +  +AE  +K + +LD   +  Y+
Sbjct: 673 GRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYM 732

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L+ MYA+AG   D+ + RKLM+ K I K PG SW+EV N+++ F +++ SH ++  + E
Sbjct: 733 LLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIRE 792

Query: 689 KLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPA 729
           KL +LM++I  +G+   E     ++HSE+LAV FG++SLPA
Sbjct: 793 KLDELMEKIAHLGYVRTESPRSEIHHSEKLAVAFGIMSLPA 833



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 159/372 (42%), Gaps = 65/372 (17%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV------------ 275
           CG+ SA+   + LH++ + +   S   + N LL  Y+ CG + DA ++            
Sbjct: 35  CGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVIT 94

Query: 276 --------------------FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
                               F  +  R+V SW  I++G+ Q G +   L +   MR+ G 
Sbjct: 95  HNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGD 154

Query: 316 D-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             PN +TF   + SC +L    +       + K        V TA+VDM    G +  A 
Sbjct: 155 SLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFAS 214

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--------------- 419
           KQ   + K+ + +  N+ + G+ ++   + A+E F  M   D                  
Sbjct: 215 KQFSRI-KNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVR 273

Query: 420 ----------------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
                           D  TY+S L AC+ L SL   +Q+H +++++    + +V S+++
Sbjct: 274 EALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMV 333

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           E Y KCG +++A+RVFS L   + VSW  +I  + Q G   +++ LF +M  E +     
Sbjct: 334 ELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQF 393

Query: 524 TFLAVLSACSHS 535
               ++S C ++
Sbjct: 394 ALATLISGCCNT 405


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/693 (32%), Positives = 369/693 (53%), Gaps = 35/693 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F+K P+R  +S + +++             NG    +     G ++ G    +P 
Sbjct: 249 SAVKVFDKMPQRNLVSWNSVMY---------ACLENGVFEESYGLFKGLLN-GDEGLMP- 297

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    D   ++ V+  C+R+  + LG  +H L  K  +CG+  V +SL++MY+KCG
Sbjct: 298 ---------DVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCG 348

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTML 225
            +     V+      ++ S N ++ GY+K+  F  AF    K+   D V+ N  T   +L
Sbjct: 349 YL-CEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVL 407

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
            +C       + K++H   ++  ++ S   V+NA +  Y KCG +  AE VF G+  + V
Sbjct: 408 PVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMV 467

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
            SW A+I G  Q+G   K L L  LMR  G++P+ +T    L++CA L++   G   H  
Sbjct: 468 SSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGS 527

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +++ G  L +F+  ++V +Y   G+I  AK     M +  + V WN  I GF +N+   +
Sbjct: 528 MLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNM-EEKNLVCWNTMINGFSQNEFPFD 586

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ F QM+ +    DE +    L ACS + +L   +++H   VKS    +  V  SLI+
Sbjct: 587 ALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLID 646

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y KCG  E ++ +F ++     V+WN +I  Y  +G  RKAI LF+ M   G RP + T
Sbjct: 647 MYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVT 706

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+A+L+AC+H+GLV +G +    M   +GI P+  HY+C+VD+LGRAG+L  AL  ++ L
Sbjct: 707 FIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNEL 766

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P KP + IW  L ++CR + DL + E ++ ++LEL PD A  YV +SN YA  G   +  
Sbjct: 767 PDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVR 826

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT- 703
           + R+ MK   + K+ GCSWIE+  K+ RF   ++S  +  K+ +   +L ++I  IG+  
Sbjct: 827 KMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKP 886

Query: 704 ----------DNEKEDRVLYHSERLAVGFGLIS 726
                     ++EK   +  HSE+LA+ FGL++
Sbjct: 887 DTSCVLHELEEDEKIKILRNHSEKLAISFGLLN 919



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 233/474 (49%), Gaps = 9/474 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           KQ +  +L  C   + +E+GR+ H  I T      D  +   LV MY+ C        V 
Sbjct: 93  KQLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVF 152

Query: 176 KQMPYLDIASCNCLLAGYAKNALF-DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
                 ++   N LL+GY +N+LF D  F F   +   +  P+++T   ++  C  +  +
Sbjct: 153 NASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDV 212

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+ +H   +K + LS   V NAL+ MY K G +E A  VF+ + QRN++SW +++   
Sbjct: 213 RLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYAC 272

Query: 295 KQHGDYEKPLRLV--CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            ++G +E+   L    L  ++G+ P+  T    +  CA      +G +FH   +K G+  
Sbjct: 273 LENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCG 332

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V ++++DMYS  G + EA+       K+   +SWN+ I G+ +++    A E   +M
Sbjct: 333 ELKVNSSLLDMYSKCGYLCEARVLFDTNEKNV--ISWNSMIGGYSKDRDFRGAFELLRKM 390

Query: 413 VRND-AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCG 470
              D    +E T  ++L  C         ++IH   ++  F +S+  V ++ +  Y KCG
Sbjct: 391 QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S   AE VF  + +  V SWN++I  + QNG  RKA+ L+  M   G+ P   T  ++LS
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           AC+    +  G+++  SM++  G   +E     +V L  + GK+ +A +F  N+
Sbjct: 511 ACARLKSLSCGKEIHGSMLRN-GFELDEFICISLVSLYVQCGKILLAKLFFDNM 563


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 216/637 (33%), Positives = 348/637 (54%), Gaps = 14/637 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   I +L+   + + L LG++ H +  K  +     V+ SL+NMY K         V 
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAI 234
             M   D+ S N ++AG A+N L  +A   F++L    ++P+ YT +++L    SL   +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              KQ+H   +K+  +S + VS AL+  Y +   M++AE +FE     ++++W A++ G+
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGY 492

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q  D  K L+L  LM + G   +++T      +C  L   + G   HA  IK G  L  
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V + I+DMY   G++  A+     +      V+W   I+G   N + E A   FSQM  
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                DEFT +++ KA S L +L    QIH+  +K    ++  VG+SL++ Y KCGS +D
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +F ++   ++ +WN+M+   +Q+G  ++ + LF++M   GI+P   TF+ VLSACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           SGLV +  K   SM  +YGI PE  HYSC+ D LGRAG ++ A   I ++ ++ +A ++R
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L AACR   D +  + ++ ++LEL+P D++ YV LSNMYA A    + +  R +MK  +
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
           + K+PG SWIEV NKI+ F   ++S+ +   +Y K+K +++ I+  G+            
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911

Query: 704 DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + EKE  + YHSE+LAV FGL+S P        + L 
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 220/464 (47%), Gaps = 8/464 (1%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           L+ Y  +  +      F  +   DV+ +  T+  MLA    + ++  G+Q+H   +KL  
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                VSN+L+ MY K      A +VF+ + +R++ISW ++I G  Q+G   + + L   
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406

Query: 310 MREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           +   G+ P++YT T  L + +SL     +    H   IK       FV TA++D YS   
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + EA+   +    +   V+WNA +AG+ ++    + ++ F+ M +     D+FT +++ 
Sbjct: 467 CMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           K C  L ++   +Q+H+  +KS ++ ++ V S +++ Y KCG    A+  F  +   D V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +W +MI    +NG   +A  +F +M + G+ P   T   +  A S    ++ G+++  + 
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           +K      +    + +VD+  + G ++ A      + +      W  +      H + K 
Sbjct: 645 LK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQHGEGKE 702

Query: 609 AEFISKQI--LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
              + KQ+  L + P D   ++ + +  + +GL ++A +  + M
Sbjct: 703 TLQLFKQMKSLGIKP-DKVTFIGVLSACSHSGLVSEAYKHMRSM 745



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 141/592 (23%), Positives = 251/592 (42%), Gaps = 82/592 (13%)

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           +H    K  + GD+FV  +LVN+Y K G +K    + ++MPY D+   N +L  Y +   
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            ++A           + PN  T   +  I G  S  D G+           +   A  N 
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS--DAGQ-----------VKSFANGN- 272

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
                       DA SV E + +   +S       +   G Y   L+    M E  ++ +
Sbjct: 273 ------------DASSVSEIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVECD 314

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           + TF + LA+   + +  +G   H   +K G+ L   V  ++++MY  L +   A+    
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP-SL 437
            M +    +SWN+ IAG  +N    EA+  F Q++R     D++T +S+LKA S LP  L
Sbjct: 375 NMSER-DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           +  +Q+H   +K    S+  V ++LI+AY++    ++AE +F +    D+V+WN+M+  Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGY 492

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +Q+    K + LF  M  +G R  + T   V   C     +  G++V    +K  G   +
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLD 551

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC----------------- 600
               S ++D+  + G +  A     ++P+ P    W  + + C                 
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMR 610

Query: 601 ------------------RCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQA 641
                              C + L+    I    L+L+  +D  V  +L +MYA+ G   
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           DA    K ++M  I+          +N +    +Q+    E  ++++++K L
Sbjct: 671 DAYCLFKRIEMMNIT---------AWNAMLVGLAQHGEGKETLQLFKQMKSL 713



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 46/410 (11%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LG+  HA I       ++F+  +L++MY+KCG +     V  +MP  D+ S N +LA 
Sbjct: 55  LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114

Query: 193 YAKNAL-----FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           YA+++        QAF  F  L    V  +  T S ML +C     +   +  H    K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                  V+ AL+ +Y+K G +++ + +FE +  R+V+ W  ++  + + G  E+ + L 
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
                 G++PNE T  + LA  +                      GD      V  ++  
Sbjct: 235 SAFHSSGLNPNEITLRL-LARIS----------------------GDDSDAGQVKSFAN- 270

Query: 368 GEIWEAKKQLKEMGKSASSVS----WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
                        G  ASSVS     N  ++ +  + +    ++ F+ MV +D  CD+ T
Sbjct: 271 -------------GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  +L     + SLA  +Q+H   +K   +  + V +SLI  Y K   +  A  VF  ++
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
             D++SWNS+I   +QNG   +A+ LF +++  G++P   T  +VL A S
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 7/161 (4%)

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H+RI+  +      + ++LI  Y+KCGS   A RVF ++   D+VSWNS++ AY+Q+   
Sbjct: 62  HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121

Query: 504 -----RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
                ++A +LF  +  + +  +  T   +L  C HSG V   +  F     + G+  +E
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGLDGDE 180

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
                +V++  + GK++   +    +P +    +W  +  A
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLMLKA 220


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/674 (31%), Positives = 353/674 (52%), Gaps = 75/674 (11%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRY-HALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           L S  D     ++L  C + +   +  RY HA + K+    + F+   L++ Y+KCG ++
Sbjct: 13  LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID---------------- 213
               V  +MP  +I + N ++ G  K    D+A S F  +   D                
Sbjct: 73  DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132

Query: 214 ---------------VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
                             N Y+++++L+ C  L+ +++G Q+H+   K  +LS   + +A
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY KCG + DA+ VF+ +  RNV+SW ++I  F+Q+G   + L +  +M E  ++P+
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQL 377
           E T    +++CASL    +G   H +V+K      D +   A VDMY+    I EA+   
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312

Query: 378 KEM---------------GKSASS---------------VSWNAQIAGFFRNQKTEEAIE 407
             M                 +AS+               VSWNA IAG+ +N + EEA+ 
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSS 461
            F  + R       +++++ILKAC+ L  L    Q H  ++K  F      E ++ VG+S
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI+ Y KCG  E+   VF ++   D VSWN+MI  ++QNG   +A+ LF +M+  G +P 
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + T + VLSAC H+G V++G+  F SM +++G+ P   HY+CMVDLLGRAG LE A   I
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +P++P + IW  L AAC+ H ++ + +++++++LE++P ++  YV LSNMYAE G   
Sbjct: 553 EEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWE 612

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE--- 698
           D    RK M+ + ++K+PGCSWI++    + F  ++KSH    +++  L  L+ ++    
Sbjct: 613 DVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQ 672

Query: 699 ---DIGHTDNEKED 709
              +IG   +E+ D
Sbjct: 673 DHTEIGSLSSEEMD 686


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/597 (33%), Positives = 336/597 (56%), Gaps = 1/597 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +   +S CS    LE GR+ H    + AV  D  V  +L+++Y KC  +     + 
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   ++ S   ++AGY +N+   +A + F +L     QP+ +  +++L  CGSL+AI 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA  +K    S   V N+L+ MY KC  + +A +VFE L + + IS+ A+I G+ 
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + GD    + +   MR   + P+  TF   L   +S     +    H  ++K G +L  +
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G++++D+YS    + +AK     M  +   V WNA I G  +N++ EEA++ F+Q+  +
Sbjct: 454 AGSSLIDVYSKFSLVEDAKAVFNLM-HNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVS 512

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             A +EFT+ +++   S L S+   +Q H++I+K+  +S+ HV ++LI+ Y KCG  ++ 
Sbjct: 513 GLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEG 572

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F      DV+ WNSMI  Y+Q+G+A +A+ +F  M   G+ P   TF+ VLSAC+H+
Sbjct: 573 RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G + F+ M  +Y I P   HY+ +V+L GR+GKL  A  FI  +PI+P A +WR 
Sbjct: 633 GLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRS 692

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +AC    ++++  + ++  L  DP D+   V +SN+YA  GL +DA++ R+ M    +
Sbjct: 693 LLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGV 752

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL 712
            KEPG SWIEV  +++ F ++ + H E   +Y  L +L   +++ G+  +  E  +L
Sbjct: 753 VKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDTSELTLL 809



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 279/573 (48%), Gaps = 18/573 (3%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C++   +  G++ H +  +  + G+ +V  +L+N+YAK G I + + V   +P  + 
Sbjct: 121 LRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNP 180

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            +   ++ GY++      A   F K+    V+P+ +  ++ ++ C +L  ++ G+Q H  
Sbjct: 181 VTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGY 240

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             ++   +  +V NAL+ +Y KC  +  A  +F+ +  RN++SWT +I G+ Q+    + 
Sbjct: 241 AYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEA 300

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + +   + ++G  P+ +     L SC SL     G   HA  IK  +   ++V  +++DM
Sbjct: 301 MAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDM 360

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+    + EA+   + + +   ++S+NA I G+ R      AI+ FS+M          T
Sbjct: 361 YAKCEHLTEARAVFEALAED-DAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLT 419

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           + S+L   S   ++   +QIH  IVKS    +++ GSSLI+ Y+K    EDA+ VF+ + 
Sbjct: 420 FVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMH 479

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D+V WN+MI   +QN +  +A+ LF ++ V G+ P   TF+A+++  S    +  GQ+
Sbjct: 480 NRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQ 539

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIFISNLPIKPTAPIWRPLFAACRC 602
            F + + + G   +    + ++D+  + G + E  L+F S L        W  + +    
Sbjct: 540 -FHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTL--GKDVICWNSMISTYAQ 596

Query: 603 HSDLKMAEFISKQI--LELDPDDAAVYVTLSNMY---AEAGLQADAEEQRKLMKMKEISK 657
           H   + A ++ + +    ++P+    YVT   +    A AGL  +       MK K  + 
Sbjct: 597 HGQAEEALYVFRMMGGTGVEPN----YVTFVGVLSACAHAGLVDEGLRHFDFMKTK-YAI 651

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           EPG    E Y  +   F ++       +  E++
Sbjct: 652 EPGT---EHYASVVNLFGRSGKLHAAKEFIERM 681



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 207/414 (50%), Gaps = 5/414 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA    T    D F+   L+  Y+K G ++    +  +MP+ ++ S    ++ +A++   
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 200 DQA---FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           + A   F+ F +  G +  PN +  ++ L  C    A+  G+Q+H   +++       V 
Sbjct: 94  EDAVALFAAFQRASGGEA-PNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            AL+ +Y K G ++ A  VF+ L  +N ++WTA+I G+ Q G     L L   M  DG+ 
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ +    A+++C++L     G   H    +  +     V  A++D+Y     +  A+K 
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M ++ + VSW   IAG+ +N    EA+  F Q+ +     D F  +SIL +C  L +
Sbjct: 273 FDCM-ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           +    Q+H+  +K+  ES+ +V +SLI+ Y KC    +A  VF  L   D +S+N+MI+ 
Sbjct: 332 IWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           YS+ G    AI +F KM    ++P+  TF+++L   S    ++  +++   +VK
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVK 445



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 122/238 (51%), Gaps = 4/238 (1%)

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA+ +  G     F+   ++  YS LG + +A++    M    + VSW + I+   ++  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRM-PHKNLVSWGSAISMHAQHGC 92

Query: 402 TEEAIEAFSQMVRNDA--ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            E+A+  F+   R     A +EF  +S L+AC+   +++  +Q+H   V+   + NV+VG
Sbjct: 93  EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++LI  Y K G  + A  VF  L   + V+W ++I  YSQ G+   A+ LF KM ++G+R
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           P      + +SACS  G ++ G++          +  + +  + ++DL  +  +L +A
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQT-HGYAYRIAVETDASVINALIDLYCKCSRLSLA 269


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/668 (32%), Positives = 352/668 (52%), Gaps = 38/668 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +AC +F++ P+R   S + +I                 ST +  F DGF           
Sbjct: 173 AACGVFDEMPQRNVFSWTVMIVG---------------STEHGLFFDGF---------KF 208

Query: 107 TCYSLES--LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
            C  L S  L DK     ++  C   + LELG+  HA I         FV+ SL+NMYAK
Sbjct: 209 FCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAK 268

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G I+    V   M   +  S N +++G   N L  +AF  F+++      PN YT  ++
Sbjct: 269 LGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV 328

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
               G L  ++ GK++     +L       V  AL+ MY KCG + DA SVF+     N 
Sbjct: 329 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD----TNF 384

Query: 285 IS------WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           I+      W A+I+G+ Q G  ++ L L   M ++GI  + YT+     + A+ ++   G
Sbjct: 385 INCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG 444

Query: 339 YMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
            + H  V+K G+ L    V  AI D YS  G + + +K    M +    VSW   +  + 
Sbjct: 445 RVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYS 503

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           ++   EEA+  F  M     A ++FT+SS+L +C+ L  L    Q+H  + K+  ++   
Sbjct: 504 QSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKC 563

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + S+LI+ Y KCGS  +A +VF +++  D+VSW ++I  Y+Q+G    A+ LF +M + G
Sbjct: 564 IESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG 623

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           I+    T L VL ACSH G+V++G   F+ M   YG++PE  HY+C++DLLGR G+L+ A
Sbjct: 624 IKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDA 683

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
           + FI  +P++P   +W+ L   CR H ++++ E  +++IL + P+ +A YV LSN Y E 
Sbjct: 684 MEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIET 743

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   D    R +MK + + KEPG SWI V  ++++F+S ++ H +  ++Y KL++L ++I
Sbjct: 744 GSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKI 803

Query: 698 EDIGHTDN 705
           + +G+  +
Sbjct: 804 KAMGYVPD 811



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 244/494 (49%), Gaps = 12/494 (2%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVV 175
           Q +I+VL  C+ +  +   +  H L+ K+       +       ++Y+KC + ++   V 
Sbjct: 119 QDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVF 178

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  ++ S   ++ G  ++ LF   F FF ++    + P+ + YS ++  C  L +++
Sbjct: 179 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 238

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +HAQ +   + +   VS +LL MY K G +ED+  VF  + + N +SW A+I+G  
Sbjct: 239 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 298

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G + +   L   M+     PN YT      +   L + +MG        + G+     
Sbjct: 299 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVL 358

Query: 356 VGTAIVDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           VGTA++DMYS  G + +A+            +  WNA I+G+ ++  ++EA+E + QM +
Sbjct: 359 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWE 473
           N    D +TY S+  A +   SL     +H  ++K   +   V V +++ +AY+KCG  E
Sbjct: 419 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLE 478

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           D  +VF ++   D+VSW +++ AYSQ+    +A+  F  M  EG  P   TF +VL +C+
Sbjct: 479 DVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCA 538

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIF--ISNLPIKPTA 590
               ++ G++V   + K  G+  E+   S ++D+  + G + E   +F  ISN    P  
Sbjct: 539 SLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKISN----PDI 593

Query: 591 PIWRPLFAACRCHS 604
             W  + +    H 
Sbjct: 594 VSWTAIISGYAQHG 607


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/534 (36%), Positives = 316/534 (59%), Gaps = 16/534 (2%)

Query: 209 LDGID---VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           LD ID   ++P+   Y+T+L  C  L  + EGK +H   +   +     + N+LL MY +
Sbjct: 62  LDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYAR 121

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG +E A  +F+ +  R+++SWT++I G+ Q+      L L   M  DG +PNE+T +  
Sbjct: 122 CGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSL 181

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           +  C  + + + G   HA   K G     FVG+++VDMY+  G + EA     ++G   +
Sbjct: 182 VKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG-CKN 240

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWNA IAG+ R  + EEA+  F +M R      EFTYS++L +CS +  L   + +H+
Sbjct: 241 EVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHA 300

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            ++KS  +   +VG++L+  Y K GS  DAE+VF +L   DVVS NSM+  Y+Q+G  ++
Sbjct: 301 HLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKE 360

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A   F++M+  GI P + TFL+VL+ACSH+ L+ +G+  F  ++++Y I P+ +HY+ +V
Sbjct: 361 AAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNIEPKVSHYATIV 419

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGRAG L+ A  FI  +PI+PT  IW  L  A + H + +M  + ++++ ELDP    
Sbjct: 420 DLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPG 479

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            +  L+N+YA AG   D  + RK+MK   + KEP CSW+EV N ++ F + + +H +  K
Sbjct: 480 THTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEK 539

Query: 686 VYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           +++  ++L Q+I++IG+  +           EKE  + YHSE+LA+ F L++ P
Sbjct: 540 IHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTP 593



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 258/563 (45%), Gaps = 57/563 (10%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           + C SLE   D+     +L  C++   L+ G+  H  +  +    D  +  SL+ MYA+C
Sbjct: 65  IDCGSLEP--DRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARC 122

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G ++    +  +MP+ D+ S   ++ GYA+N     A   F ++     +PN +T S+++
Sbjct: 123 GSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLV 182

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             CG +++ + G+Q+HA   K    S   V ++L+ MY +CG + +A  VF+ L  +N +
Sbjct: 183 KCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEV 242

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G+ + G+ E+ L L   M+ +G  P E+T++  L+SC+S+     G   HA +
Sbjct: 243 SWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHL 302

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           +K    L  +VG  ++ MY+  G I +A+K   ++ K    VS N+ + G+ ++   +EA
Sbjct: 303 MKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVK-VDVVSCNSMLIGYAQHGLGKEA 361

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
            + F +M+R     ++ T+ S+L ACS    L   +     + K   E  V   +++++ 
Sbjct: 362 AQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDL 421

Query: 466 YNKCGSWEDAERVFSQLTAADVVS-WNSMIKA---------------------------- 496
             + G  + A+    ++     V+ W +++ A                            
Sbjct: 422 LGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTH 481

Query: 497 ------YSQNGRARKAIILFEKMVVEGIRP---------TNSTFLAVLSACSHSGLVQDG 541
                 Y+  GR      + + M   G++           NS  + V +  +H    +  
Sbjct: 482 TLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQ-KEKI 540

Query: 542 QKVFESM---VKEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPI 592
            K++E +   +KE G +P+ +H    VD   +   L+     +AL F + N P   T  I
Sbjct: 541 HKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRI 600

Query: 593 WRPLFAACRCHSDLKMAEFISKQ 615
            + +     CHS +K    + K+
Sbjct: 601 MKNIRVCGDCHSAIKYVSLVVKR 623


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/696 (31%), Positives = 361/696 (51%), Gaps = 42/696 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA +LF++ P R G++ + LI              +GY+       +G  +D C     +
Sbjct: 53  SARKLFDEMPDRNGVTWACLI--------------SGYT------QNGMPEDACGVLKEM 92

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECL--ELGRRYHALITKTAVCGDQF-VTASLVNMYA 163
                E  L  +F         +E  L    GR+ H    +T +   +  V   L+NMYA
Sbjct: 93  I---FEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYA 149

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KCGDI    +V   M   D  S N ++ G  +N  F+ A   +  +    + P+++   +
Sbjct: 150 KCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALIS 209

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L+ C SL  I  G+Q H + +KL      +VSN LL +Y +   + + + VF  +++R+
Sbjct: 210 ALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERD 269

Query: 284 VISWTAIINGFKQHG-DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
            +SW  +I      G    + + +   M   G  PN  TF   LA+ +SL  S + +  H
Sbjct: 270 QVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIH 329

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           A ++K  +   + +  A++  Y   GE+   ++    M +    VSWN+ I+G+  N+  
Sbjct: 330 ALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELL 389

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
            +A++    M++     D FT++++L AC+ + +L    ++H+  +++  ES+V +GS+L
Sbjct: 390 CKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSAL 449

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           ++ Y+KCG  + A R F+ +   ++ SWNSMI  Y+++G    A+ LF +M + G  P +
Sbjct: 450 VDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDH 509

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            TF+ VLSACSH GLV +G + F+SM + YG++P   HYSCMVDLLGRAG+L+    FI+
Sbjct: 510 ITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFIN 569

Query: 583 NLPIKPTAPIWRPLFAACRCHSDLKMAEF---ISKQILELDPDDAAVYVTLSNMYAEAGL 639
            +PIKP   IWR +  AC C  + +  E     ++ +  +DP +A  YV LSNMYA  G 
Sbjct: 570 KMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGK 628

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             D    R+ M+   + KE GCSW+ + + ++ F + + SH E   +Y KLK+L ++I D
Sbjct: 629 WEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRD 688

Query: 700 IGHTDN-----------EKEDRVLYHSERLAVGFGL 724
            G+               KE+ + YHSE+LAV F L
Sbjct: 689 AGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVL 724



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 243/499 (48%), Gaps = 9/499 (1%)

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           +H  + K     D F+  +L+N+Y + GD  S   +  +MP  +  +  CL++GY +N +
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICG-SLSAIDEGKQLHAQTMKLQYL-SKTAVS 256
            + A     ++      PN + + + +  C  S+    +G+Q+H   ++     +K AV 
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L+ MY KCG ++ A SVF  +V ++ +SW ++I G  Q+  +E  ++    MR+ G+ 
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ +    AL+SCASL    +G   H + IK G+ +   V   ++ +Y+    + E +K 
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKT-EEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              M +    VSWN  I     +  +  EAIE F +M+R   + +  T+ ++L   S L 
Sbjct: 262 FSWMLER-DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMI 494
           +     QIH+ I+K   + +  + ++L+  Y K G  E+ E +FS+++   D VSWNSMI
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  N    KA+ L   M+  G R    TF  VLSAC+    ++ G +V    ++   +
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRAC-L 439

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFI 612
             +    S +VD+  + G+++ A  F + +P++     W  + +  A   H D  +  F 
Sbjct: 440 ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYS-WNSMISGYARHGHGDNALRLFT 498

Query: 613 SKQILELDPDDAAVYVTLS 631
             ++    PD       LS
Sbjct: 499 RMKLSGQLPDHITFVGVLS 517



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 5/214 (2%)

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
           +FH  V+K G     F+   ++++Y  +G+   A+K   EM    + V+W   I+G+ +N
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEM-PDRNGVTWACLISGYTQN 79

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKAC--SLLPSLATCEQIHSRIVKSKF-ESNV 456
              E+A     +M+      + F + S ++AC  S+L       Q+H   +++   ++ V
Sbjct: 80  GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKG-RQVHGYAIRTGLNDAKV 138

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            VG+ LI  Y KCG  + A  VF  +   D VSWNSMI    QN     A+  +  M   
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           G+ P+N   ++ LS+C+  G +  GQ+     +K
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIK 232


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/605 (32%), Positives = 337/605 (55%), Gaps = 8/605 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+     +LG + H    K+    D  +  + ++MYAKC  +     V   +P   
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GYA+     +A   F  L    +  +  + S  L  C  +    EG QLH 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+N +L MY KCG + +A ++F+ + +R+ +SW AII   +Q+ +  K
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M    ++P+++T+   + +CA  +  + G   H +++K GM L  FVG+A+VD
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVD 484

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G + EA+K + +  +  ++VSWN+ I+GF   +++E A   FSQM+      D F
Sbjct: 485 MYGKCGMLMEAEK-IHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY+++L  C+ + ++   +QIH++I+K    S+V++ S+L++ Y+KCG+ +D+  +F + 
Sbjct: 544 TYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKT 603

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V+W++MI AY+ +G   +AI LFE+M +  ++P ++ F++VL AC+H G V  G 
Sbjct: 604 PKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGL 663

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+ M   YG+ P   HYSCMVDLLGR+ ++  AL  I ++  +    IWR L + C+ 
Sbjct: 664 HYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKM 723

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             ++++AE     +L+LDP D++ YV L+N+YA  G+  +  + R +MK  ++ KEPGCS
Sbjct: 724 QGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCS 783

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-------DNEKEDRVLYHS 715
           WIEV ++++ F   +K+H    ++YE+   L+ +++  G+        D E E++  Y  
Sbjct: 784 WIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDSMLDEEVEEQDPYEG 843

Query: 716 ERLAV 720
            +  V
Sbjct: 844 LKTTV 848



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 163/603 (27%), Positives = 288/603 (47%), Gaps = 17/603 (2%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYST---RN----DSFPDGFIDDGC 100
           A ++F++ P R  +S + +IF GY  I   G +++ + T   R+    +S    ++ +G 
Sbjct: 60  AFKVFDRMPHRDVISWNTMIF-GYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGV 118

Query: 101 ---SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
              S  + V   SL+   D      VL  CS  E   LG + H L  +     D    ++
Sbjct: 119 NRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSA 178

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           LV+MY+KC  +     + ++MP  ++   + ++AGY +N  F +    F  +  + +  +
Sbjct: 179 LVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVS 238

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             TY+++   C  LSA   G QLH   +K  +   + +  A L MY KC  M DA  VF 
Sbjct: 239 QSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L      S+ AII G+ +     K L +   ++   +  +E + + AL +C+ ++    
Sbjct: 299 TLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H   +K G+     V   I+DMY   G + EA     +M +   +VSWNA IA   
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERR-DAVSWNAIIAAHE 417

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N++  + +  F  M+R+    D+FTY S++KAC+   +L    +IH RIVKS    +  
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWF 477

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VGS+L++ Y KCG   +AE++  +L     VSWNS+I  +S   ++  A   F +M+  G
Sbjct: 478 VGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG 537

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           + P N T+  VL  C++   ++ G+++   ++K   +  +    S +VD+  + G ++ +
Sbjct: 538 VIPDNFTYATVLDVCANMATIELGKQIHAQILK-LNLHSDVYIASTLVDMYSKCGNMQDS 596

Query: 578 LIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            +     P K     W  +    A   H +  +  F   Q+L + P+   +++++    A
Sbjct: 597 RLMFEKTP-KRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNH-TIFISVLRACA 654

Query: 636 EAG 638
             G
Sbjct: 655 HMG 657



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 261/566 (46%), Gaps = 41/566 (7%)

Query: 117 KQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           K+F    +L  CS  + L  G++ HA +  T+     +V   LV  Y K  ++     V 
Sbjct: 5   KKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVF 64

Query: 176 KQMPYLDIASCNCLLAGYAK-------NALFD------------------------QAFS 204
            +MP+ D+ S N ++ GYA+        +LFD                        ++  
Sbjct: 65  DRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F+++  + +  ++ T+S +L  C  +     G Q+H   +++ + +     +AL+ MY 
Sbjct: 125 IFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KC  ++ A  +F  + +RN++ W+A+I G+ Q+  + + L+L   M + G+  ++ T+  
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
              SCA L    +G   H   +K   A    +GTA +DMY+    + +A K    +    
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
              S+NA I G+ R  +  +A+E F  + R   + DE + S  L ACS++       Q+H
Sbjct: 305 RQ-SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLH 363

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
              VK     N+ V +++++ Y KCG+  +A  +F  +   D VSWN++I A+ QN    
Sbjct: 364 GLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIV 423

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           K + LF  M+   + P + T+ +V+ AC+    +  G ++   +VK  G+  +    S +
Sbjct: 424 KTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS-GMGLDWFVGSAL 482

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD--PD 622
           VD+ G+ G L  A      L  K T   W  + +        + A+    Q+LE+   PD
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGVIPD 541

Query: 623 D---AAVYVTLSNMYA-EAGLQADAE 644
           +   A V    +NM   E G Q  A+
Sbjct: 542 NFTYATVLDVCANMATIELGKQIHAQ 567


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/602 (34%), Positives = 340/602 (56%), Gaps = 15/602 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAV--VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           F+  +L+N+YAKCG +   + +  +    +  I +   L+   +   +  QA S F ++ 
Sbjct: 178 FLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMR 237

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                PN +T+S++L+   +   +  G+QLH+   K  + +   V  AL+ MY KC  M 
Sbjct: 238 CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMH 297

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASC 329
            A  VF+ + +RN++SW ++I GF  +  Y++ + +   ++RE  + PNE + +  L++C
Sbjct: 298 SAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSAC 357

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A++   + G   H  V+K G+    +V  +++DMY       E  K  + +G     V+W
Sbjct: 358 ANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR-DVVTW 416

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N  + GF +N K EEA   F  M R     DE ++S++L + + L +L     IH +I+K
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
             +  N+ +  SLI  Y KCGS  DA +VF  +   +V+SW +MI AY  +G A + I L
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 536

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           FE M+ EGI P++ TF+ VLSACSH+G V++G   F SM K + + P   HY+CMVDLLG
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLG 596

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG L+ A  FI ++P+KPT  +W  L  ACR + +LKM    ++++ E++P +   YV 
Sbjct: 597 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVL 656

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           L+NM   +G   +A E R+LM +  + KEPGCSWI+V N  + F + ++SHS   ++Y+ 
Sbjct: 657 LANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKM 716

Query: 690 LKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRT 738
           L++L + ++  G+            +NE+E  + YHSE+LA+ FGL++LP  +     + 
Sbjct: 717 LEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKN 776

Query: 739 LE 740
           L 
Sbjct: 777 LR 778



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 208/420 (49%), Gaps = 13/420 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H+LI K     + FV  +LV+MYAKC D+ S V V  QMP  ++ S N ++ G+  
Sbjct: 264 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 323

Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           N L+D+A   F   L    V PN  + S++L+ C ++  ++ G+Q+H   +K   +  T 
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N+L+ MY KC   ++   +F+ +  R+V++W  ++ GF Q+  +E+      +MR +G
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 443

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I P+E +F+  L S ASL   H G   H Q+IK G      +  +++ MY+  G + +A 
Sbjct: 444 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA- 502

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
            Q+ E  +  + +SW A I+ +  +    + IE F  M+         T+  +L ACS  
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS-- 560

Query: 435 PSLATCEQIHSRIVKSKFESNVHVG----SSLIEAYNKCGSWEDAERVFSQLTAADVVS- 489
                 E+  +     K   +++ G    + +++   + G  ++A+R    +      S 
Sbjct: 561 -HTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSV 619

Query: 490 WNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           W +++ A  + G  +      E++  +E   P N   LA  + C+ SG +++  +V   M
Sbjct: 620 WGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLA--NMCTRSGRLEEANEVRRLM 677



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 161/321 (50%), Gaps = 4/321 (1%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAI 290
           ++    Q+H Q +   Y S   + N L+ +Y KCG +  A  +F       + +++WT++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I        + + L L   MR  G  PN++TF+  L++ A+      G   H+ + K G 
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               FVGTA+VDMY+   ++  A +   +M +  + VSWN+ I GFF N   + A+  F 
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPER-NLVSWNSMIVGFFHNNLYDRAVGVFK 335

Query: 411 QMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            ++R      +E + SS+L AC+ +  L    Q+H  +VK       +V +SL++ Y KC
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
             +++  ++F  +   DVV+WN ++  + QN +  +A   F  M  EGI P  ++F  VL
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455

Query: 530 SACSHSGLVQDGQKVFESMVK 550
            + +    +  G  + + ++K
Sbjct: 456 HSSASLAALHQGTAIHDQIIK 476



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 24/351 (6%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           +SA ++F++ P+R  +S + +I   + N        N Y      F D   +      +P
Sbjct: 297 HSAVRVFDQMPERNLVSWNSMIVGFFHN--------NLYDRAVGVFKDVLRE---KTVIP 345

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
                     ++  V  VLS C+    L  GR+ H ++ K  +    +V  SL++MY KC
Sbjct: 346 ----------NEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
                 V + + +   D+ + N L+ G+ +N  F++A ++F  +    + P+  ++ST+L
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
               SL+A+ +G  +H Q +KL Y+    +  +L+TMY KCG + DA  VFEG+   NVI
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWTA+I+ ++ HG   + + L   M  +GI+P+  TF   L++C+       G + H   
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNS 574

Query: 346 IKR--GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +K+   M  G      +VD+    G + EAK+ ++ M    +   W A + 
Sbjct: 575 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 3/152 (1%)

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS--QLTAADVVSWNSM 493
           SL    QIH++I+ + + S   + ++LI  Y KCG    A  +FS        +V+W S+
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I   S      +A+ LF +M   G  P   TF ++LSA + + +V  GQ++  S++ ++G
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL-HSLIHKHG 275

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
                   + +VD+  +   +  A+     +P
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 81/188 (43%), Gaps = 2/188 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D+     VL   +    L  G   H  I K     +  +  SL+ MYAKCG +     
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 504

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V + +   ++ S   +++ Y  +   +Q    F  +    ++P+H T+  +L+ C     
Sbjct: 505 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 564

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAII 291
           ++EG        K+  ++      A ++ +  + G +++A+   E +  +   S W A++
Sbjct: 565 VEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALL 624

Query: 292 NGFKQHGD 299
              +++G+
Sbjct: 625 GACRKYGN 632


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/587 (34%), Positives = 332/587 (56%), Gaps = 4/587 (0%)

Query: 118 QFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +FV+  V+  C++   +E G + H  + ++    D +V  SL++ Y+K G+I+    V  
Sbjct: 151 EFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFD 210

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           Q+      +   ++AGY K      +   F ++   +V P+ Y  S++L+ C  L  ++ 
Sbjct: 211 QLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG 270

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ+HA  ++       +V N L+  Y KC  ++    +F+ +V +N+ISWT +I+G+ Q
Sbjct: 271 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 330

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +    + ++L   M   G  P+ +  T  L SC S      G   HA  IK  +   +FV
Sbjct: 331 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 390

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
              ++DMY+    + +AKK    M +  + +S+NA I G+   +K  EA+E F +M    
Sbjct: 391 KNGLIDMYAKSNLLIDAKKVFDVMAEQ-NVISYNAMIEGYSSQEKLSEALELFHEMRVRL 449

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +EFT+++++ A S L SL   +Q H+++VK   +    V ++L++ Y KCGS E+A 
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 509

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F+     DVV WNSMI  ++Q+G A +A+ +F +M+ EGI+P   TF+AVLSACSH+G
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            V+DG   F SM   +GI P   HY+C+V LLGR+GKL  A  FI  +PI+P A +WR L
Sbjct: 570 RVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSL 628

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            +ACR   ++++ ++ ++  +  DP D+  Y+ LSN++A  G+ AD ++ R  M   E+ 
Sbjct: 629 LSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVV 688

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
           KEPG SWIEV NK+  F +++ +H E   +   L  L+Q I+  G+ 
Sbjct: 689 KEPGRSWIEVNNKVNVFIARDTTHRE-ADIGSVLDILIQHIKGAGYV 734



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 223/439 (50%), Gaps = 3/439 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  I  + +  D F+   L+N+ +K   + +   V  +MP+ ++ + + +++ Y++    
Sbjct: 72  HGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYS 131

Query: 200 DQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           ++A   F+ L     + PN +  ++++  C  L  +++G QLH   ++  +     V  +
Sbjct: 132 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 191

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+  Y K G +E+A  VF+ L ++  ++WT II G+ + G     L L   MRE  + P+
Sbjct: 192 LIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 251

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            Y  +  L++C+ L     G   HA V++RG  +   V   ++D Y+    +   +K   
Sbjct: 252 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 311

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M    + +SW   I+G+ +N    EA++ F +M R     D F  +S+L +C    +L 
Sbjct: 312 QM-VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              Q+H+  +K+  ES+  V + LI+ Y K     DA++VF  +   +V+S+N+MI+ YS
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
              +  +A+ LF +M V   +P   TF A+++A S+   ++ GQ+    +VK  G+    
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVK-MGLDFCP 489

Query: 559 AHYSCMVDLLGRAGKLEIA 577
              + +VD+  + G +E A
Sbjct: 490 FVTNALVDMYAKCGSIEEA 508



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 171/317 (53%), Gaps = 1/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V  VLS CS  E LE G++ HA + +     D  V   L++ Y KC  +K+   + 
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            QM   +I S   +++GY +N+   +A   F +++ +  +P+ +  +++L  CGS  A++
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA T+K    S   V N L+ MY K  ++ DA+ VF+ + ++NVIS+ A+I G+ 
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
                 + L L   MR     PNE+TF   + + ++L +   G  FH Q++K G+    F
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPF 490

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A+VDMY+  G I EA+K           V WN+ I+   ++ + EEA+  F +M++ 
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549

Query: 416 DAACDEFTYSSILKACS 432
               +  T+ ++L ACS
Sbjct: 550 GIQPNYVTFVAVLSACS 566



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/525 (24%), Positives = 246/525 (46%), Gaps = 60/525 (11%)

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           +++P    ++ +L +  S + I   K +H Q +     S T ++N L+ +  K   +++A
Sbjct: 44  NLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNA 103

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCAS 331
             VF+ +  +N+I+W+++++ + Q G  E+ L + V L R+ G  PNE+     + +C  
Sbjct: 104 RVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQ 163

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L     G   H  V++ G     +VGT+++D YS  G I EA+    ++ +  ++V+W  
Sbjct: 164 LGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK-TAVTWTT 222

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IAG+ +  ++  ++E F+QM   +   D +  SS+L ACS+L  L   +QIH+ +++  
Sbjct: 223 IIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRG 282

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            E +V V + LI+ Y KC   +   ++F Q+   +++SW +MI  Y QN    +A+ LF 
Sbjct: 283 TEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFG 342

Query: 512 KMVVEGIRPTNSTFLAVLSAC-----------------------------------SHSG 536
           +M   G +P      +VL++C                                   + S 
Sbjct: 343 EMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSN 402

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI---KPTAPIW 593
           L+ D +KVF+ M ++  I      Y+ M++      KL  AL     + +   KP    +
Sbjct: 403 LLIDAKKVFDVMAEQNVI-----SYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTF 457

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT--LSNMYAEAGLQADAEEQRKLMK 651
             L  A    + L+  +    Q++++  D    +VT  L +MYA+ G     EE RK+  
Sbjct: 458 AALITAASNLASLRHGQQFHNQLVKMGLDFCP-FVTNALVDMYAKCG---SIEEARKMFN 513

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
              I ++  C     +N +    S +  H E  +     +++M++
Sbjct: 514 -SSIWRDVVC-----WNSM---ISTHAQHGEAEEALGMFREMMKE 549


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 337/629 (53%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  GR  HA +    +  +     +L NMYAKC        V  +MP  D
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARD 290

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLH 241
             + N L+AGYA+N L + A    +++   D + P+  T  ++L  C    A+   +++H
Sbjct: 291 RVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVH 350

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  ++  +  +  VS A+L +Y KCG ++ A  VF+G+  RN +SW A+I G+ ++GD  
Sbjct: 351 AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDAT 410

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M  +G+D  + +   AL +C  L     G   H  +++ G+     V  A++
Sbjct: 411 EALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALI 470

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY        A +   E+G   + VSWNA I G  +N  +E+A+  FS+M   +   D 
Sbjct: 471 TMYCKCKRTDLAAQVFDELGYK-TRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDS 529

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT  SI+ A + +        IH   ++   + +V+V ++LI+ Y KCG    A  +F+ 
Sbjct: 530 FTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS 589

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
                V++WN+MI  Y  +G  + A+ LFE+M   G  P  +TFL+VLSACSH+GLV +G
Sbjct: 590 ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           Q+ F SM ++YG+ P   HY  MVDLLGRAGKL  A  FI  +P++P   ++  +  AC+
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACK 709

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++AE  +++I EL+P++   +V L+N+YA A L  D    R  M+ K + K PG 
Sbjct: 710 LHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGW 769

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRV 711
           S +++ N+I+ F+S + +H +   +Y +L +L+++I+ +G+           D+ K   +
Sbjct: 770 SIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLL 829

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSE+LA+ +GLI        +  + L 
Sbjct: 830 NTHSEKLAIAYGLIRTAPGTTIQIKKNLR 858



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 184/367 (50%), Gaps = 11/367 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P   T++++L +C + + +  G+ +HAQ        +   + AL  MY KC    DA  V
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRN 334
           F+ +  R+ ++W A++ G+ ++G  E  + +V  M+ EDG  P+  T    L +CA  + 
Sbjct: 283 FDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQA 342

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
                  HA  ++ G      V TAI+D+Y   G +  A+K    M +  +SVSWNA I 
Sbjct: 343 LGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM-QDRNSVSWNAMIK 401

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+  N    EA+  F +MV       + +  + L AC  L  L    ++H  +V+   ES
Sbjct: 402 GYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLES 461

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           NV+V ++LI  Y KC   + A +VF +L     VSWN+MI   +QNG +  A+ LF +M 
Sbjct: 462 NVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ 521

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI---LPEEAH-YSCMVDLLGR 570
           +E ++P + T ++++ A     L      +    +  Y I   L ++ +  + ++D+  +
Sbjct: 522 LENVKPDSFTLVSIIPA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 576

Query: 571 AGKLEIA 577
            G++ IA
Sbjct: 577 CGRVSIA 583



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  P   TFT  L  CA+  +   G   HAQ+  RG++      TA+ +MY+      +A
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACS 432
           ++    M  +   V+WNA +AG+ RN   E A+    +M   D    D  T  S+L AC+
Sbjct: 280 RRVFDRM-PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              +L  C ++H+  V+  F+  V+V +++++ Y KCG+ + A +VF  +   + VSWN+
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           MIK Y++NG A +A+ LF++MV EG+  T+ + LA L AC   G + +G++V E +V+
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVR 456


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/547 (36%), Positives = 320/547 (58%), Gaps = 16/547 (2%)

Query: 207  LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
            + + G++V+     Y ++L  C S +AI EG+++HA  +K  Y     +   L+ +Y KC
Sbjct: 468  MGIQGLEVE--FQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC 525

Query: 267  GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
              + DA  V + + +RNV+SWTA+I+G+ Q G   + L L   M   G  PNE+TF   L
Sbjct: 526  RCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 585

Query: 327  ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
             SC S     +G   H+ VIK       FVG++++DMY+  G+I EA++    + +    
Sbjct: 586  TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-DV 644

Query: 387  VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
            VS  A I+G+ +    EEA++ F ++ R     +  TY+S+L A S L +L    Q+HS 
Sbjct: 645  VSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSH 704

Query: 447  IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            ++++K    V + +SLI+ Y+KCGS   + R+F  +    V+SWN+M+  YS++G  R+A
Sbjct: 705  VLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREA 764

Query: 507  IILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCM 564
            + LF+ M  E  ++P + TFLAVLS CSH G+   G ++F  MV +  G  PE  HY C+
Sbjct: 765  VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCV 824

Query: 565  VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
            VDL GRAG++E A  FI  +P +PTA IW  L  ACR H ++ + EF+++++LE++ ++A
Sbjct: 825  VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENA 884

Query: 625  AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
              YV LSN+YA AG   D    R+LMK K + KEPG SWIE+   ++ F + ++SH    
Sbjct: 885  GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKE 944

Query: 685  KVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKF 733
            +V+ K+++L  +I++ G+           D+E+++++L  HSE+LA+ FGLI  P     
Sbjct: 945  EVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPV 1004

Query: 734  ECSRTLE 740
               + L 
Sbjct: 1005 RIIKNLR 1011



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 208/439 (47%), Gaps = 7/439 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C  +  +  G+R HA + KT      ++   L+ +Y KC  +     V+ +MP  +
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++GY++     +A   F+++      PN +T++T+L  C S S    G+Q+H+
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + S   V ++LL MY K G + +A  VF+GL +R+V+S TAII+G+ Q G  E+
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   ++ +G+  N  T+   L + + L     G   H+ V++  +     +  +++D
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDE 421
           MYS  G +  +++    M +  + +SWNA + G+ ++    EA+E F  M   N    D 
Sbjct: 723 MYSKCGSLTYSRRIFDSMPER-TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGSWEDAERVF 479
            T+ ++L  CS         +I   +V  K  FE  +     +++ + + G  E+A    
Sbjct: 782 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 841

Query: 480 SQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            ++      + W S++ A   +        +  +++   I   N+    +LS    S   
Sbjct: 842 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL--EIESENAGNYVILSNLYASAGR 899

Query: 539 QDGQKVFESMVKEYGILPE 557
            D  +    ++KE  ++ E
Sbjct: 900 WDDVRTVRELMKEKAVIKE 918


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/546 (36%), Positives = 320/546 (58%), Gaps = 16/546 (2%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           + + G++V+     Y ++L  C S +AI EG+++HA  +K  Y     +   L+ +Y KC
Sbjct: 1   MGIQGLEVE--FQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC 58

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             + DA  V + + +RNV+SWTA+I+G+ Q G   + L L   M   G  PNE+TF   L
Sbjct: 59  RCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 118

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            SC S     +G   H+ VIK       FVG++++DMY+  G+I EA++    + +    
Sbjct: 119 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER-DV 177

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           VS  A I+G+ +    EEA++ F ++ R     +  TY+S+L A S L +L    Q+HS 
Sbjct: 178 VSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSH 237

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           ++++K    V + +SLI+ Y+KCGS   + R+F  +    V+SWN+M+  YS++G  R+A
Sbjct: 238 VLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREA 297

Query: 507 IILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCM 564
           + LF+ M  E  ++P + TFLAVLS CSH G+   G ++F  MV +  G  PE  HY C+
Sbjct: 298 VELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCV 357

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           VDL GRAG++E A  FI  +P +PTA IW  L  ACR H ++ + EF+++++LE++ ++A
Sbjct: 358 VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENA 417

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             YV LSN+YA AG   D    R+LMK K + KEPG SWIE+   ++ F + ++SH    
Sbjct: 418 GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKE 477

Query: 685 KVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKF 733
           +V+ K+++L  +I++ G+           D+E+++++L  HSE+LA+ FGLI  P     
Sbjct: 478 EVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPV 537

Query: 734 ECSRTL 739
              + L
Sbjct: 538 RIIKNL 543



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 208/439 (47%), Gaps = 7/439 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C  +  +  G+R HA + KT      ++   L+ +Y KC  +     V+ +MP  +
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++GY++     +A   F+++      PN +T++T+L  C S S    G+Q+H+
Sbjct: 76  VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + S   V ++LL MY K G + +A  VF+GL +R+V+S TAII+G+ Q G  E+
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   ++ +G+  N  T+   L + + L     G   H+ V++  +     +  +++D
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDE 421
           MYS  G +  +++    M +  + +SWNA + G+ ++    EA+E F  M   N    D 
Sbjct: 256 MYSKCGSLTYSRRIFDSMPER-TVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGSWEDAERVF 479
            T+ ++L  CS         +I   +V  K  FE  +     +++ + + G  E+A    
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374

Query: 480 SQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            ++      + W S++ A   +        +  +++   I   N+    +LS    S   
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLL--EIESENAGNYVILSNLYASAGR 432

Query: 539 QDGQKVFESMVKEYGILPE 557
            D  +    ++KE  ++ E
Sbjct: 433 WDDVRTVRELMKEKAVIKE 451


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/600 (34%), Positives = 328/600 (54%), Gaps = 12/600 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA + K     D FV  +L++ Y+  G++     V   +   D+ S   ++A YA+N  +
Sbjct: 159 HACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFY 218

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           +++   F ++  +  +PN++T S  L  C  L A + GK +H   +K  Y     V  AL
Sbjct: 219 EESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIAL 278

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L +Y K G + DA+ +FE + + ++I W+ +I  + Q    ++ L L   MR+  + PN 
Sbjct: 279 LELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNN 338

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +TF   L +CAS  +  +G   H+ V+K G+    FV  AI+D+Y+  GEI  + K  +E
Sbjct: 339 FTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEE 398

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +    + V+WN  I G+ +    E A+  F+ M+ +D    E TYSS+L+A + L +L  
Sbjct: 399 L-PDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             QIHS  +K+ +  +  V +SLI+ Y KCG   DA   F ++   D VSWN+MI  YS 
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G + +A+ LF+ M     +P   TF+ VLSACS++GL+  GQ  FESM K+Y I P   
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE 577

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+CMV LLGR G+ + A+  I  +  +P+  +WR L  AC  H  + +    ++ +LE+
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEM 637

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P D A +V LSNMYA AG   +    RK M+ K++ KEPG SW+E    ++ F   + S
Sbjct: 638 EPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTS 697

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           H ++  +   L+ L ++  D G+            D+EKE  +  HSERLA+ +GLI  P
Sbjct: 698 HPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTP 757



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 224/417 (53%), Gaps = 5/417 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H  I K     D F    L+N Y +   ++    +  +MP  +  S   L  GY++
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 196 NALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           +  F QA  F L++  +G +V P  + ++T+L +  S+        LHA   KL + +  
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNP--FVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA 171

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V  AL+  Y   G ++ A  VF+ +  ++++SWT ++  + ++  YE+ L+L   MR  
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  PN +T + AL SC  L   ++G   H   +K       FVG A++++Y+  GEI +A
Sbjct: 232 GYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDA 291

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           ++  +EM K+   + W+  IA + ++ +++EA++ F +M +     + FT++S+L+AC+ 
Sbjct: 292 QRLFEEMPKT-DLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             SL   +QIHS ++K    SNV V +++++ Y KCG  E++ ++F +L   + V+WN++
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           I  Y Q G   +A+ LF  M+   ++PT  T+ +VL A +    ++ G ++    +K
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIK 467



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 1/309 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C   E   +G+  H    K     D FV  +L+ +YAK G+I     + ++MP  D+
Sbjct: 244 LKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDL 303

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              + ++A YA++    +A   FL++    V PN++T++++L  C S  ++D GKQ+H+ 
Sbjct: 304 IPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSC 363

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K    S   VSNA++ +Y KCG +E++  +FE L  RN ++W  II G+ Q GD E+ 
Sbjct: 364 VLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERA 423

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L   M E  + P E T++  L + ASL     G   H+  IK        V  +++DM
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDM 483

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G I +A+    +M K    VSWNA I G+  +  + EA+  F  M   D   ++ T
Sbjct: 484 YAKCGRINDARLTFDKMNKR-DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLT 542

Query: 424 YSSILKACS 432
           +  +L ACS
Sbjct: 543 FVGVLSACS 551



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 182/362 (50%), Gaps = 33/362 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF + PK      +DLI    M      I+R   S R+    D F+    ++ VP  
Sbjct: 291 AQRLFEEMPK------TDLIPWSLM------IARYAQSDRSKEALDLFLRMRQTSVVPNN 338

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            ++  S         VL  C+    L+LG++ H+ + K  +  + FV+ +++++YAKCG+
Sbjct: 339 -FTFAS---------VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGE 388

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I++ + + +++P  +  + N ++ GY +    ++A + F  +   D+QP   TYS++L  
Sbjct: 389 IENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRA 448

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
             SL+A++ G Q+H+ T+K  Y   T V+N+L+ MY KCG + DA   F+ + +R+ +SW
Sbjct: 449 SASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSW 508

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I G+  HG   + L L  +M+     PN+ TF   L++C     S+ G ++  Q   
Sbjct: 509 NAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC-----SNAGLLYKGQAHF 563

Query: 348 RGMALGDFVG------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
             M+    +       T +V +   LG   EA K + E+    S + W A +     ++K
Sbjct: 564 ESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK 623

Query: 402 TE 403
            +
Sbjct: 624 VD 625


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/629 (33%), Positives = 336/629 (53%), Gaps = 14/629 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     +E G   H LI K  +  D  V   L++MY K   +     +  +M   D
Sbjct: 222 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 281

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY++  L++++   F+++     +P+  T +++L  CG L  ++ GK +H 
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHD 340

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +   Y   T  SN L+ MY KCG +  ++ VF G+  ++ +SW ++IN + Q+G +++
Sbjct: 341 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDE 400

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L  +M+ D + P+  T+ + L+    L + H+G   H  + K G      V   +VD
Sbjct: 401 AMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVD 459

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  GE+ ++ K  + M K+   ++WN  IA    ++     +   S+M       D  
Sbjct: 460 MYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 518

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  SIL  CSLL +    ++IH  I K   ES+V VG+ LIE Y+KCGS  ++ +VF  +
Sbjct: 519 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 578

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVV+W ++I A    G  +KA+  F +M   GI P +  F+A++ ACSHSGLV++G 
Sbjct: 579 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 638

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M K+Y I P   HY+C+VDLL R+  L+ A  FI ++P+KP + IW  L +ACR 
Sbjct: 639 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 698

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             D ++AE +S++I+EL+PDD   YV +SN+YA  G        RK +K + + K+PGCS
Sbjct: 699 SGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 758

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           W+E+ NK+Y F +  K   +  +V + L  L   +   G+  N           EK D +
Sbjct: 759 WMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDIL 818

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSERLA+ FGL++       +  + L 
Sbjct: 819 CGHSERLAIAFGLLNTKPGTPLQVMKNLR 847



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 259/539 (48%), Gaps = 9/539 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+     E+ +  H  +       D ++  +L++MY +  D+     V ++MP  D
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++GY  N  +++A   + +   + V P+ YT S++L  CG L +++EG  +H 
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 240

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K+       V+N LL+MY K   + D   +F+ +V R+ +SW  +I G+ Q G YE+
Sbjct: 241 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 300

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M      P+  T T  L +C  L +   G   H  +I  G          +++
Sbjct: 301 SIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 359

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  +++    M K   SVSWN+ I  + +N   +EA++ F +M++ D   D  
Sbjct: 360 MYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSV 417

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY  +L   + L  L   +++H  + K  F SN+ V ++L++ Y KCG   D+ +VF  +
Sbjct: 418 TYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM 477

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D+++WN++I +   +      + +  +M  EG+ P  +T L++L  CS     + G+
Sbjct: 478 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 537

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   + K  G+  +    + ++++  + G L  +      +  K     W  L +AC  
Sbjct: 538 EIHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGM 595

Query: 603 HSDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           + + K A   F   +   + PD  A +V +    + +GL  +       MK K+   EP
Sbjct: 596 YGEGKKAVRAFGEMEAAGIVPDHVA-FVAIIFACSHSGLVEEGLNYFHRMK-KDYKIEP 652



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 256/536 (47%), Gaps = 9/536 (1%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKN 196
           + H+LI    +      +A L+  YA   D  S  +V +   P  ++   N ++     N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            LF +A S + +   I +QP+ YT+ +++  C  L   +  K +H + + + + S   + 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+ MY +   ++ A  VFE +  R+V+SW ++I+G+  +G + + L +    R  G+ 
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 213

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ YT +  L +C  L +   G + H  + K G+     V   ++ MY     + + ++ 
Sbjct: 214 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 273

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             +M     +VSWN  I G+ +    EE+I+ F +MV N    D  T +SIL+AC  L  
Sbjct: 274 FDKM-VLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGD 331

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   + +H  ++ S +E +    + LI  Y KCG+   ++ VFS +   D VSWNSMI  
Sbjct: 332 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 391

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y QNG   +A+ LF KM+   ++P + T++ +LS  +  G +  G+++   + K  G   
Sbjct: 392 YIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK-MGFNS 449

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
                + +VD+  + G++  +L    N+  +     W  + A+C    D  +    IS+ 
Sbjct: 450 NIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT-WNTIIASCVHSEDCNLGLRMISRM 508

Query: 616 ILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-GCSWIEVYNK 669
             E + PD A +   L      A  +   E    + K+   S  P G   IE+Y+K
Sbjct: 509 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 564



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +SSI +A +   +     ++HS I+      +V   + LI  Y     + D    FS   
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKY---AHFRDPTSSFSVFR 72

Query: 484 AA----DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            A    +V  WNS+I+A + NG   +A+ L+ +     ++P   TF +V++AC  +GL+ 
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD 130

Query: 540 -DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +  K     V + G   +    + ++D+  R   L+ A      +P++     W  L +
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-WNSLIS 189

Query: 599 A 599
            
Sbjct: 190 G 190


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/631 (32%), Positives = 348/631 (55%), Gaps = 17/631 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  C+  + LE G+  H+ I+ T  +  D  +  SL+ MYAKCG ++    + ++M   
Sbjct: 127 VLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR 186

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            ++S N ++A YA++  F++A   +   + +DV+P+  T++++L+ C +L  +D+G+++H
Sbjct: 187 SVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRTFTSVLSACSNLGLLDQGRKIH 243

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A           ++ NALLTMY +C  ++DA  +F+ L +R+V+SW+A+I  F +   ++
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + +     M+ +G+ PN YTF   L +CAS+ +   G   H Q++  G  +    GTA+V
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-DAACD 420
           D+Y+  G + EA+    ++      + W   I G+ +       +E + +M         
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGL-WTVLIGGYSKQGHRTGVLELYREMKNTTKVPAT 422

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +  YS ++ AC+ L + A   Q HS I      S+  + +SL+  Y++ G+ E A +VF 
Sbjct: 423 KIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFD 482

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++++ D ++W ++I  Y+++G    A+ L+++M +EG  P+  TF+ VL ACSH+GL + 
Sbjct: 483 KMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQ 542

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++F S+  +Y + P  AHYSC++DLL RAG+L  A   I+ +P++P    W  L  A 
Sbjct: 543 GKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGAS 602

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H D+K A   + QI +LDP D A YV LSN++A  G  A     R  M  + + K  G
Sbjct: 603 RIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRG 662

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG---------HTDNEKEDRV 711
            SWIEV ++I+ F   + SH    +++ +L++L  +I++ G         H   EKE  +
Sbjct: 663 SSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKEL 722

Query: 712 L--YHSERLAVGFGLISLPAKNKFECSRTLE 740
           L   HSE+LA+ FGLI+           TL 
Sbjct: 723 LLRLHSEKLAIAFGLIATAPGTTLRIFNTLR 753



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 259/517 (50%), Gaps = 15/517 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE  R+ H  I+  A   + F+   +V  Y KCG + S  A    +   +  S   +L  
Sbjct: 40  LESVRQIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTA 98

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+N  +  A   + ++D   +QPN   Y+T+L  C S+ A++EGK +H++    + L  
Sbjct: 99  YAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKL 155

Query: 253 TAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             +  N+LLTMY KCG +EDA+ +FE +  R+V SW A+I  + Q G +E+ +RL   M 
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM- 214

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
              ++P+  TFT  L++C++L     G   HA +  RG  L   +  A++ MY+    + 
Sbjct: 215 --DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLD 272

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A K  + + +    VSW+A IA F      +EAIE +S+M       + +T++S+L AC
Sbjct: 273 DAAKIFQRLPRR-DVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLAC 331

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + +  L     +H +I+ + ++  +  G++L++ Y   GS ++A  +F Q+   D   W 
Sbjct: 332 ASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWT 391

Query: 492 SMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +I  YS+ G     + L+ +M     +  T   +  V+SAC+  G   D ++   S ++
Sbjct: 392 VLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA-HSDIE 450

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
             G++ +    + +V++  R G LE A      +  + T   W  L A    H +  +A 
Sbjct: 451 ADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA-WTTLIAGYAKHGEHGLAL 509

Query: 611 FISKQILELDPDDAAVYVTLSNMYA--EAGLQADAEE 645
            + K+ +EL+  + +    +  +YA   AGLQ   ++
Sbjct: 510 GLYKE-MELEGAEPSELTFMVVLYACSHAGLQEQGKQ 545



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 8/176 (4%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y   L+ C  L S+    QIH RI  +   +NV +G+ ++ AY KCGS   A   F  + 
Sbjct: 30  YRDALRQCQDLESV---RQIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARAAFDAIA 85

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +  SW SM+ AY+QNG  R A+ L+++M    ++P    +  VL AC+    +++G+ 
Sbjct: 86  RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKA 142

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +   +    G+  +    + ++ +  + G LE A      +  +  +  W  + AA
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSS-WNAMIAA 197


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/676 (31%), Positives = 364/676 (53%), Gaps = 24/676 (3%)

Query: 79  ISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRR 138
           +S + +   N++F   F+ +     V V+ YS + L +          C     L  GR 
Sbjct: 56  VSLSKHRKLNEAFE--FLQEMDKAGVSVSSYSYQCLFEA---------CRELRSLSHGRL 104

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H  +          +   ++ MY +C  ++    +  +M  L+  S   +++ YA+  +
Sbjct: 105 LHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGI 164

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            D+A   F  +     +P    Y+T+L    +  A+D G+Q+HA  ++    S T++   
Sbjct: 165 LDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG 224

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           ++ MY+KCG +  A+ VF+ +  +  ++ T ++ G+ Q G     L+L   +  +G++ +
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWD 284

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            + F+V L +CASL   ++G   HA V K G+     VGT +VD Y        A +  +
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSL 437
           E+ +  + VSW+A I+G+ +  + EEA++ F  +  +N +  + FTY+SI +ACS+L   
Sbjct: 345 EI-REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               Q+H+  +K     + +  S+LI  Y+KCG  +DA  VF  +   D+V+W + I  +
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +  G A +A+ LFEKMV  G++P + TF+AVL+ACSH+GLV+ G+   ++M+++Y + P 
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT 523

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY CM+D+  R+G L+ AL F+ N+P +P A  W+   + C  H +L++ E   +++ 
Sbjct: 524 IDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELR 583

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           +LDP+D A YV   N+Y  AG   +A E  KLM  + + KE  CSWI+   KI+RF   +
Sbjct: 584 QLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGD 643

Query: 678 KSHSEMPKVYEKLKQLMQQIE-DIGHTD-NEKEDRVLYHSERLAVGFGLISL----PA-- 729
           K H +  ++YEKLK+    +E D+   +  E+ +++L HSERLA+ FGLIS+    PA  
Sbjct: 644 KHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPI 703

Query: 730 ---KNKFECSRTLEYA 742
              KN   C    E+A
Sbjct: 704 KVFKNLRACPDCHEFA 719



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 188/392 (47%), Gaps = 3/392 (0%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N  L   +K+   ++AF F  ++D   V  + Y+Y  +   C  L ++  G+ LH +   
Sbjct: 52  NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                   + N +L MY +C  +EDA+ +F+ + + N +S T +I+ + + G  +K + L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G  P    +T  L S  + R    G   HA VI+ G+     + T IV+MY  
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  AK+   +M      V+    + G+ +  +  +A++ F  +V      D F +S 
Sbjct: 232 CGWLVGAKRVFDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +LKAC+ L  L   +QIH+ + K   ES V VG+ L++ Y KC S+E A R F ++   +
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKVF 545
            VSW+++I  Y Q  +  +A+  F+ +  +     NS T+ ++  ACS       G +V 
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              +K   ++  +   S ++ +  + G L+ A
Sbjct: 411 ADAIKR-SLIGSQYGESALITMYSKCGCLDDA 441


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/602 (33%), Positives = 339/602 (56%), Gaps = 28/602 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L LG + HA   K+    D  V  + ++MYAKC +++    +      L+
Sbjct: 288 VLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLN 347

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GY++     +A   F KL    +  +  + S  L  C ++  + EG QLH 
Sbjct: 348 LQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHG 407

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  +     V+NA + MY KC  +++A  VF+ + +++ +SW AII   +Q+ +  K
Sbjct: 408 LATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSK 467

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L ++  M   G++P+EYTF   L +CA    +H G   H  ++K GMA   ++G+++VD
Sbjct: 468 TLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNH-GMEIHTTIVKLGMASNPYIGSSLVD 526

Query: 363 MYSGLGEIWEAKKQLKEM----GKSASS----------------------VSWNAQIAGF 396
           MYS  G I EA+K   ++    G S +                       VSWNA I+G+
Sbjct: 527 MYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGY 586

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
              +++E+A   F++M+      D+FTYS++L  C+ L S+   +QIH+ ++K + + +V
Sbjct: 587 VMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDV 646

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           ++ S+L++ Y+KCG+  D+  +F +    D V+WN+MI  Y+ +G   +AI LFE MV+ 
Sbjct: 647 YICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLM 706

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            I P ++TF+++L AC+H GLV+ G   F  M KEYG+ P   HYS MVD+LG++G++E 
Sbjct: 707 NIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEK 766

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
           AL  I  +P +    IWR L +AC+ + ++++ AE  +  +L LDP D++ Y+ LSN+YA
Sbjct: 767 ALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYA 826

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
           +AG+   A E R  M+  ++ KEPGCSW+E+ ++ + F   +K+H    ++Y  L  +  
Sbjct: 827 DAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGLALIYN 886

Query: 696 QI 697
           ++
Sbjct: 887 EM 888



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 178/699 (25%), Positives = 318/699 (45%), Gaps = 66/699 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYM---NIEEKGISRNGYSTRN----DSFPDGFIDDGC 100
           A +LF+  P R  +S + +IF GY    ++    +      TR+    +S   GF+  G 
Sbjct: 103 ATKLFDGMPLRDVVSWNAMIF-GYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTG- 160

Query: 101 SNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVT 155
            N   V  +     S     +K F + +L  CS  E  +LG + H +  +     D    
Sbjct: 161 ENLESVKVFIEMGRSGVEFDNKSFSV-ILKVCSILENYKLGTQIHGIALRMGYDTDVVSG 219

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
           ++L++MYAKC  +     V   MP  +  S + ++AG  +N   D     F ++  + V 
Sbjct: 220 SALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVG 279

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +   Y+++L  C +L  +  G QLHA  +K  ++    V  A L MY KC  M+DA+ +
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+     N+ S+ A+I G+ Q  +  + L L   + +  +  +E + + AL +CA+++  
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGL 399

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G   H    K   +    V  A +DMY     + EA +   EMG+   +VSWNA IA 
Sbjct: 400 SEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRK-DAVSWNAIIAA 458

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             +N++  + +     M+R+    DE+T+ S+LKAC+   SL    +IH+ IVK    SN
Sbjct: 459 HEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVKLGMASN 517

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQL---------------------------TAADVV 488
            ++GSSL++ Y+KCG  ++AE++ +++                               +V
Sbjct: 518 PYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIV 577

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN++I  Y    ++  A   F +M+  GI P   T+  VL  C++   +  G+++   +
Sbjct: 578 SWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHV 637

Query: 549 VKEYGILPEEAHY-----SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +K      +E  Y     S +VD+  + G L  + +     PI+     W  +      H
Sbjct: 638 IK------KELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVT-WNAMICGYAHH 690

Query: 604 --SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              +  +  F S  ++ + P+  A +V+L    A  GL     +   +MK KE   +P  
Sbjct: 691 GMGEEAIKLFESMVLMNIMPNH-ATFVSLLRACAHMGLVERGLDYFHMMK-KEYGLDPR- 747

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
             +E Y+ +     ++    E+ K  E ++++  + +D+
Sbjct: 748 --LEHYSNMVDILGKS---GEVEKALELIQEMPFEADDV 781



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 239/486 (49%), Gaps = 34/486 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C+++   ELG++ HA +  +      FV+  L+ +Y  CG++     +   MP  D
Sbjct: 55  VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114

Query: 183 IASCNCLLAGYA-KNALFDQAFSF------------------------------FLKLDG 211
           + S N ++ GYA  N +   +  F                              F+++  
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V+ ++ ++S +L +C  L     G Q+H   +++ Y +     +ALL MY KC  +++
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           + +VF  + Q+N ISW+AII G  Q+   +  L++   M++ G+  ++  +   L SCA+
Sbjct: 235 SFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT 294

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L +  +G   HA  +K        V TA +DMY+    + +A++ L +M ++ +  S+NA
Sbjct: 295 LPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQR-LFDMSENLNLQSYNA 353

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I G+ +      A+  F ++ ++    DE + S  L+AC+ +  L+   Q+H    KS 
Sbjct: 354 MITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSN 413

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F  N+ V ++ I+ Y KC + ++A RVF ++   D VSWN++I A+ QN    K + +  
Sbjct: 414 FSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILV 473

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M+  G+ P   TF +VL AC+   L   G ++  ++VK  G+       S +VD+  + 
Sbjct: 474 SMLRSGMEPDEYTFGSVLKACAGDSL-NHGMEIHTTIVK-LGMASNPYIGSSLVDMYSKC 531

Query: 572 GKLEIA 577
           G ++ A
Sbjct: 532 GMIDEA 537



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 234/527 (44%), Gaps = 57/527 (10%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
            +S +   C    A + GKQ HA  +   +     VSN LL +YI CG +  A  +F+G+
Sbjct: 51  NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110

Query: 280 VQRNVISWTAII-------------------------------NGFKQHGDYEKPLRLVC 308
             R+V+SW A+I                               +GF Q G+  + +++  
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G++ +  +F+V L  C+ L N  +G   H   ++ G       G+A++DMY+   
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + E+      M +  + +SW+A IAG  +N   +  ++ F +M +      +  Y+S+L
Sbjct: 231 RLDESFTVFYAMPQK-NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVL 289

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           K+C+ LP L    Q+H+  +KS F  +  V ++ ++ Y KC + +DA+R+F      ++ 
Sbjct: 290 KSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQ 349

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           S+N+MI  YSQ     +A++LF K+    +     +    L AC+    + +G ++   +
Sbjct: 350 SYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQL-HGL 408

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             +          +  +D+ G+   L+ A      +  +  A  W  + AA   + +   
Sbjct: 409 ATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAAHEQNEERSK 467

Query: 609 AEFISKQILE--LDPDDAAVYVTLSNMYAEAG--LQADAEEQRKLMKMKEISKEP--GCS 662
              I   +L   ++PD+   Y   S + A AG  L    E    ++K+  ++  P  G S
Sbjct: 468 TLNILVSMLRSGMEPDE---YTFGSVLKACAGDSLNHGMEIHTTIVKLG-MASNPYIGSS 523

Query: 663 WIEVY-------------NKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
            +++Y             NKI+     + ++SE P+  E+ K +  +
Sbjct: 524 LVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDR 570



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 123/283 (43%), Gaps = 37/283 (13%)

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNE-------YTFTVALASCASLRNSHMGYM 340
           T ++  F QH     P R V +        N          F+     CA  R   +G  
Sbjct: 11  TRVVLLFHQHLTKNIPYRRVRIFSISTASVNHEKPATSVANFSFVFKECAKQRAHELGKQ 70

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-------------GKSASS- 386
            HA +I  G     FV   ++ +Y   G +  A K    M             G +AS+ 
Sbjct: 71  AHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASND 130

Query: 387 ----------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
                           VSWN+ ++GF +  +  E+++ F +M R+    D  ++S ILK 
Sbjct: 131 MVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKV 190

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           CS+L +     QIH   ++  ++++V  GS+L++ Y KC   +++  VF  +   + +SW
Sbjct: 191 CSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISW 250

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +++I    QN      + +F++M   G+  + S + +VL +C+
Sbjct: 251 SAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCA 293


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 309/534 (57%), Gaps = 16/534 (2%)

Query: 209 LDGIDVQPNHYT---YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           LD +D +    T   Y +++  C    ++D+ + +HA     Q+     + N+L+ +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG + DA  VF+G+  R++ SWT++I G+ Q+   ++ L L+  M      PN +TF   
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +  +  +S +G   HA  +K       +VG+A++DMY+  G +  A     ++ +S +
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKN 230

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWNA IAGF R    E  +  F++M RN      FTYSS+  A + + +L   + +H+
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            ++KS    +  VG+++++ Y K GS  DA +VF ++   DVV+WNSM+ A++Q G  R+
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+  FE+M   G+     TFL++L+ACSH GLV++G++ F+ M+KEY + PE  HY  +V
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVV 409

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGRAG L  AL+FI  +P+KPTA +W  L  +CR H + K+ +F +  + ELDPDD  
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
             V L N+YA  G    A   RK+MK   + KEP CSW+E+ N ++ F + + +H    +
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529

Query: 686 VYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           +Y+K +++  QI   G+  N           E++ ++ YHSE++A+ F LI++P
Sbjct: 530 IYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMP 583



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 181/353 (51%), Gaps = 1/353 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+R   L+  R  HA +  +   G  F+  SL+++Y KCG +     V   MP  D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+AGYA+N + D+A      +     +PN +T++++L   G+ ++   G+Q+HA
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I GF + GD E 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   M+ +G +   +T++   ++ A +     G   HA +IK G  L  FVG  I+D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A+K    + K    V+WN+ +  F +     EA+  F +M +     ++ 
Sbjct: 310 MYAKSGSMIDARKVFDRVDKK-DVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           T+ SIL ACS    +   +Q    + +   E  +    ++++   + G   DA
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDA 421


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/653 (32%), Positives = 343/653 (52%), Gaps = 71/653 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  HA + K+    + F+   L++ YAKCG ++    +  +MP  ++ + N ++ G  K 
Sbjct: 40  RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99

Query: 197 ALFDQAFSFFLKLDGID-------------------------------VQPNHYTYSTML 225
              D+A S F  +   D                                  N YT+++ L
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
           + C  L+ ++ G Q+H+   K   LS   + +AL+ MY KCG + DA+ VF+ +  RNV+
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW ++I  ++Q+G   + L++  +M E  ++P+E T    +++CASL    +G   HA+V
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279

Query: 346 IKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEM---------------GKSASS--- 386
           +K      D +   A VDMY+    I EA+     M                 +AS+   
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339

Query: 387 ------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
                       VSWNA IAG+ +N + EEA+  F  + R       +T+++ILKAC+ L
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADL 399

Query: 435 PSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             L    Q H  ++K  F      E ++ VG+SLI+ Y KCG  E+   VF ++   D V
Sbjct: 400 ADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN+MI  ++QNG   +A+ LF +M+  G +P + T + VLSAC H+G V++G+  F SM
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSM 519

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            +++G+ P   HY+CMVDLLGRAG LE A   I  +P++P + IW  L AAC+ H ++ +
Sbjct: 520 TRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITL 579

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
            +++++++ E++  ++  YV LSNMYAE G   DA   RKLM+ + ++K+PGCSWI++  
Sbjct: 580 GKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPG 639

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQL---MQQIEDIGHTDNEKEDRVLYHSERL 718
             + F  ++KSH    +++  L  L   M+Q +D   T +   + + Y S  L
Sbjct: 640 HAHVFMVKDKSHPRKKQIHSLLDILIAEMRQKQDHAETGSLSSEEMDYSSSLL 692



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 236/505 (46%), Gaps = 68/505 (13%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID-DGCSNTVPVTC 108
           QLF+K P+R   + + ++          G+++ G+    DS      + D C+    V+ 
Sbjct: 76  QLFDKMPQRNVFTWNSVV---------TGLTKLGFLDEADSLFRSMPERDQCTWNSMVSG 126

Query: 109 YSLE----------SLLDKQ-FVIEV------LSYCSREECLELGRRYHALITKTAVCGD 151
           ++            +++ K+ FV+        LS CS    +  G + H+LI K+    D
Sbjct: 127 FAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSD 186

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
            ++ ++LV+MY+KCG++     V  +M   ++ S N L+  Y +N    +A   F  +  
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLE 246

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMME 270
             V+P+  T +++++ C SLSAI  G+++HA+ +K+  L    + SNA + MY KC  ++
Sbjct: 247 SWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIK 306

Query: 271 DAESVFEG-------------------------------LVQRNVISWTAIINGFKQHGD 299
           +A  +F+                                + +RNV+SW A+I G+ Q+G+
Sbjct: 307 EARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD----- 354
            E+ L L CL++ + + P  YTF   L +CA L + H+G   H  V+K G          
Sbjct: 367 NEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDD 426

Query: 355 -FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FVG +++DMY   G + E     ++M +    VSWNA I GF +N    EA+E F +M+
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMER-DCVSWNAMIIGFAQNGYGNEALELFREML 485

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG-SSLIEAYNKCGSW 472
            +    D  T   +L AC     +       S + +    + +    + +++   + G  
Sbjct: 486 DSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFL 545

Query: 473 EDAERVFSQL-TAADVVSWNSMIKA 496
           E+A+ +  ++    D V W S++ A
Sbjct: 546 EEAKSIIEEMPVQPDSVIWGSLLAA 570



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 194/401 (48%), Gaps = 74/401 (18%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLA------ICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           A   FLKL G     + +T S+  A      I   LSAID  + +HA  +K  + ++  +
Sbjct: 2   ARKIFLKLAG---DLSSFTVSSPFAKLLDSCIKLKLSAIDV-RCVHASVIKSGFSNEVFI 57

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI------------------------- 290
            N L+  Y KCG +ED   +F+ + QRNV +W ++                         
Sbjct: 58  QNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQ 117

Query: 291 ------INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
                 ++GF QH   E+ L    +M ++G   NEYTF   L++C+ L + + G   H+ 
Sbjct: 118 CTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSL 177

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           + K       ++G+A+VDMYS  G + +A++   EMG   + VSWN+ I  + +N    E
Sbjct: 178 IAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDR-NVVSWNSLITCYEQNGPAVE 236

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLI 463
           A++ F  M+ +    DE T +S++ AC+ L ++   +++H+R+VK  K  +++ + ++ +
Sbjct: 237 ALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFV 296

Query: 464 EAYNKC-------------------------------GSWEDAERVFSQLTAADVVSWNS 492
           + Y KC                                S + A  +F+++   +VVSWN+
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNA 356

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +I  Y+QNG   +A+ LF  +  E + PT+ TF  +L AC+
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACA 397



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 8/183 (4%)

Query: 123 VLSYCSREECLELGRRYHALITK------TAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +L  C+    L LG + H  + K      +    D FV  SL++MY KCG ++    V +
Sbjct: 392 ILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +M   D  S N ++ G+A+N   ++A   F ++     +P+H T   +L+ CG    ++E
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEE 511

Query: 237 GKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
           G+    + T              ++ +  + G +E+A+S+ E + VQ + + W +++   
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAAC 571

Query: 295 KQH 297
           K H
Sbjct: 572 KVH 574



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/297 (21%), Positives = 125/297 (42%), Gaps = 38/297 (12%)

Query: 424 YSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           ++ +L +C  L  S      +H+ ++KS F + V + + LI+AY KCGS ED  ++F ++
Sbjct: 22  FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81

Query: 483 TAADVV-------------------------------SWNSMIKAYSQNGRARKAIILFE 511
              +V                                +WNSM+  ++Q+ R  +A+  F 
Sbjct: 82  PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M  EG      TF + LSACS    +  G ++  S++ +   L +    S +VD+  + 
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDMNRGVQI-HSLIAKSPCLSDVYIGSALVDMYSKC 200

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVT 629
           G +  A      +  +     W  L      +     A  + + +LE  ++PD+  +   
Sbjct: 201 GNVNDAQQVFDEMGDRNVVS-WNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASV 259

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS--WIEVYNKIYRFFSQNKSHSEMP 684
           +S   + + ++   E   +++KM ++  +   S  ++++Y K  R          MP
Sbjct: 260 ISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/619 (33%), Positives = 343/619 (55%), Gaps = 24/619 (3%)

Query: 133  LELGRR----YHALITKTAVCGDQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
            LE G+R     HA + ++ +   Q    + L+NMYAKCG I     V + M   D  + N
Sbjct: 400  LENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWN 459

Query: 188  CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
             ++ G  +N  F +A   F ++   ++ P+++T  + L+ C SL  I  G+QLH + +KL
Sbjct: 460  SMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKL 519

Query: 248  QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF--KQHGDYEKPLR 305
                  +VSNALL +Y +CG +++ +  F  ++  + +SW ++I      +    E    
Sbjct: 520  GLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVES 579

Query: 306  LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
             + +MR  G DPN  TF   LA+ +SL    +G   HA V+KR +A    +  A++  Y 
Sbjct: 580  FLVMMRA-GWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYG 638

Query: 366  GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
              G++   +     M      VSWN+ I+G+  N+   +A++    M++     D FT++
Sbjct: 639  KCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFA 698

Query: 426  SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
            ++L AC+ + +L    ++H   V++  ES++ +GS+L++ Y KCG  + A R F  + A 
Sbjct: 699  TVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPAR 758

Query: 486  DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
            ++ SWNSMI  Y+++G   K++ LF +M ++G  P + TF+ VLSACSH+GLV +G   F
Sbjct: 759  NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHF 818

Query: 546  ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
            +SM + YG+ P   H+SCMVDLLGR G+L     F++ +P+KP   IWR +  AC C ++
Sbjct: 819  DSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGAC-CRAN 877

Query: 606  LK---MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             +   +    ++ +LE++P +A  Y+ LSNMYA  G   D  + R  M+   + KE GCS
Sbjct: 878  GRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCS 937

Query: 663  WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
            W+ + + ++ F + +KSH E   +YEKLK+L  ++   G+               KE+ +
Sbjct: 938  WVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELL 997

Query: 712  LYHSERLAVGFGLISLPAK 730
             YHSE++AV F +++ P+K
Sbjct: 998  SYHSEKIAVAF-VLTRPSK 1015



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 224/437 (51%), Gaps = 30/437 (6%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C  ++  EL    H  + K     D F+  +L+N+YA+ GD+ S   V  +MP  ++ S 
Sbjct: 87  CGSKDAEEL----HLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSW 142

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS--AIDEGKQLHAQT 244
           +CL++GY +N + ++A   F K+      PNHY + +++  C       +  G Q+H   
Sbjct: 143 SCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLM 202

Query: 245 MKLQYLSKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            K QY++    SN L++MY    GM++ A   F+ +  RN++S  ++I+ + Q GD    
Sbjct: 203 SKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSA 262

Query: 304 LRLVCLMRE----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR----GMALGDF 355
             +   M++    DG+ PNEYTF   +++  SL NS  G +   Q++ R    G     +
Sbjct: 263 FDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANS--GLVLLEQLLTRVEKSGFLHDLY 320

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG+A+V  ++  G I  AK   ++M    + VS N  I G  R ++ EEA+E F +M ++
Sbjct: 321 VGSALVSGFAKAGSIGYAKNIFQKMSYR-NVVSLNGLIIGLVRQKRGEEAVELFMEM-KD 378

Query: 416 DAACDEFTYSSILKACSLLPSLATCE-------QIHSRIVKSK-FESNVHVGSSLIEAYN 467
               +  +Y  IL A    P     E       ++H+ +++S    + + +G+ LI  Y 
Sbjct: 379 SVELNPNSYMIILTA---FPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYA 435

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG+  DA  VF  +   D V+WNSMI    QN +  +A+  F++M    + P+N T ++
Sbjct: 436 KCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMIS 495

Query: 528 VLSACSHSGLVQDGQKV 544
            LS+C+  G +  G+++
Sbjct: 496 ALSSCASLGWISVGEQL 512



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 206/435 (47%), Gaps = 33/435 (7%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I  LS C+    + +G + H    K  +  D  V+ +L+ +Y +CG +K        M 
Sbjct: 493 MISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLML 552

Query: 180 YLDIASCNCLLAGYAKN--ALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDE 236
             D  S N L+   A +  ++ +   SF + +  G D  PN  T+ T+LA   SLS  + 
Sbjct: 553 DYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWD--PNRVTFITILAAVSSLSLHEL 610

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFK 295
           GKQ+HA  +K    + TA+ NALL  Y KCG M   E++F  +  R + +SW ++I+G+ 
Sbjct: 611 GKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYI 670

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +    K + +V  M + G   + +TF   L++CA++     G   H   ++  +     
Sbjct: 671 HNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIV 730

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +G+A+VDMY+  G I +   +  EM  + +  SWN+ I+G+ R+    ++++ F+QM   
Sbjct: 731 IGSALVDMYAKCGRI-DYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQ 789

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVK---SKFESNVHV---------GSSLI 463
               D  T+  +L ACS           H+ +V    S F+S   +          S ++
Sbjct: 790 GPLPDHVTFVGVLSACS-----------HAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMV 838

Query: 464 EAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQ-NGRARKAIILFEKMVVEGIRPT 521
           +   + G     E   +Q+    +V+ W +++ A  + NGR         +M++E + PT
Sbjct: 839 DLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLE-MEPT 897

Query: 522 NSTFLAVLSACSHSG 536
           N+    +LS    SG
Sbjct: 898 NAVNYILLSNMYASG 912


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/575 (34%), Positives = 319/575 (55%), Gaps = 1/575 (0%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ H L  KTA   D FV +SLVN Y K G +     +  +MP  ++ S   +++GYA  
Sbjct: 132 RQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASK 191

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            +  +A   F  +  ++   N + ++++L+       +D GKQ+H   +K   L   +V 
Sbjct: 192 QMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVL 251

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+TMY KCG +  +  +FE    +N I+W+A+I G+ Q GD  K L+L   M   G  
Sbjct: 252 NALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFV 311

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+T    L +C+ +     G   H  ++K G     +  TA+VDMY+  G   +A+K 
Sbjct: 312 PSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKG 371

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              +      V W + IAG+ +N K EEA+  + +M       +E T +S+LKACS L +
Sbjct: 372 FDFL-LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAA 430

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +QIH+R +K      + + S+L   Y KCGS E+   +F ++   D+VSWN+MI  
Sbjct: 431 LEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISG 490

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            SQNG  R+A+ LFE+M +EG +P + TF+ VLSACSH G+V+ G   F  M  E+ ++P
Sbjct: 491 LSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVP 550

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+CMVD+L RAGKL  A  FI +  I     +WR L  ACR H + ++  +  +++
Sbjct: 551 RVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKL 610

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +EL   +++ YV LS++Y   G  AD    R++MK++ + KE GCSWIE+ + ++ F   
Sbjct: 611 MELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVG 670

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRV 711
           ++ H ++ ++   + +L + ++D G+    +   V
Sbjct: 671 DQIHPQIEEIQGAIWRLRKHMKDDGYRPGHESASV 705



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 252/515 (48%), Gaps = 8/515 (1%)

Query: 130 EECLELGRRYHALITKTAVCGD-QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           ++ L+ G+  HA I K        ++  +L+  YAKCG +     V + + + ++ S NC
Sbjct: 20  QKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNC 79

Query: 189 LLAGYAKNALFDQAF--SFFLKLDGIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTM 245
           L+ G + N      F    F ++   ++ P+ +T+  +  A   +L    + +Q+H   +
Sbjct: 80  LIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGI 139

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           K   +    V ++L+  Y K G + +A  +F+ + +RN++SWT +I+G+      ++ L 
Sbjct: 140 KTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALG 199

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +  LMR    + NE+ FT  L++         G   H  V+K G+     V  A+V MY+
Sbjct: 200 VFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYA 259

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G +      L EM    ++++W+A I G+ +   + +A++ FS+M        EFT  
Sbjct: 260 KCGNL-NYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLV 318

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
            +LKACS + ++   +Q H  ++KS +E+ ++  ++L++ Y K G   DA + F  L   
Sbjct: 319 GVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEP 378

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+V W S+I  Y QNG+  +A+ ++ +M +  I P   T  +VL ACS+   ++ G+++ 
Sbjct: 379 DLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIH 438

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
              +K YG+ PE +  S +  +  + G LE  ++    +  +     W  + +    +  
Sbjct: 439 ARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVS-WNAMISGLSQNGH 496

Query: 606 LKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            + A E   +  LE    D   +VT+ +  +  G+
Sbjct: 497 GREALELFEEMRLEGTKPDHITFVTVLSACSHMGI 531



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 193/391 (49%), Gaps = 13/391 (3%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK-TAVSNALLTMYIKCGMMEDAES 274
           P + ++  +L       ++ +G+ LHA  +K+ YLS    ++N L+  Y KCG +  A+ 
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKP--LRLVCLMREDGIDPNEYTFT-VALASCAS 331
           VFE L  +NV+S+  +I+G   +G       L L   M  + I P+ +TF  V  A+  +
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L  +      H   IK       FVG+++V+ Y  +G ++EA+K    M +  + VSW  
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPER-NLVSWTT 183

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I+G+   Q  +EA+  F  M   +   +EF ++S+L A      + + +Q+H  +VK+ 
Sbjct: 184 MISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNG 243

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
               V V ++L+  Y KCG+   +  +F   +  + ++W+++I  YSQ G + KA+ LF 
Sbjct: 244 VLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFS 303

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL---L 568
           KM   G  P+  T + VL ACS    +++G++    ++K  G   +    + +VD+    
Sbjct: 304 KMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMYAKF 362

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G  G       F+    ++P   +W  + A 
Sbjct: 363 GFTGDARKGFDFL----LEPDLVLWTSIIAG 389



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 162/322 (50%), Gaps = 1/322 (0%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           +E  L++     VLS     E ++ G++ H ++ K  V     V  +LV MYAKCG++  
Sbjct: 207 VEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNY 266

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
            + + +     +  + + L+ GY++     +A   F K+      P+ +T   +L  C  
Sbjct: 267 SLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSD 326

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           ++AI+EGKQ H   +K  Y ++   + AL+ MY K G   DA   F+ L++ +++ WT+I
Sbjct: 327 VAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSI 386

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ Q+G  E+ L +   M+   I PNE T    L +C++L     G   HA+ IK G+
Sbjct: 387 IAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGL 446

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                + +A+  MY+  G + E     + M +    VSWNA I+G  +N    EA+E F 
Sbjct: 447 GPELSIRSALSTMYAKCGSLEEGVLIFRRMLQR-DIVSWNAMISGLSQNGHGREALELFE 505

Query: 411 QMVRNDAACDEFTYSSILKACS 432
           +M       D  T+ ++L ACS
Sbjct: 506 EMRLEGTKPDHITFVTVLSACS 527


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/566 (35%), Positives = 320/566 (56%), Gaps = 2/566 (0%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG+  H  + KT +  D  V +SLV MYAKC   +  + +  +MP  D+A  N +++ Y 
Sbjct: 124 LGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYY 183

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++  F +A  +F  +     +PN  T +T ++ C  L  ++ G ++H + +   +L  + 
Sbjct: 184 QSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF 243

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           +S+AL+ MY KCG +E A  VFE + ++ V++W ++I+G+   GD    ++L   M  +G
Sbjct: 244 ISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEG 303

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P   T +  +  C+       G   H   I+  +    F+ ++++D+Y   G++  A+
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAE 363

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              K + KS   VSWN  I+G+    K  EA+  FS+M ++    D  T++S+L ACS L
Sbjct: 364 NIFKLIPKS-KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQL 422

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L   E+IH+ I++ K ++N  V  +L++ Y KCG+ ++A  VF  L   D+VSW SMI
Sbjct: 423 AALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY  +G+A  A+ LF +M+   ++P   TFLA+LSAC H+GLV +G   F  MV  YGI
Sbjct: 483 TAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGI 542

Query: 555 LPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           +P   HYSC++DLLGRAG+L  A  I   N  I+    +   LF+ACR H ++ +   I+
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIA 602

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           + +++ DPDD++ Y+ LSNMYA A    +    R  MK   + K PGCSWIE+  KI  F
Sbjct: 603 RTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPF 662

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIED 699
           F ++ SH  +  V++ L  L   +ED
Sbjct: 663 FVEDNSHLHLELVFKCLSYLSDHMED 688



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 258/521 (49%), Gaps = 7/521 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D + ++ +L  C   + L+ G+  H  +    +  D F+  +L+N+Y  C        V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60

Query: 175 VKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLS 232
              M    +I+  N L+AGY KN ++ +A   F KL     ++P+ YTY ++L  CG L 
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               GK +H   +K   +    V ++L+ MY KC   E A  +F  + +++V  W  +I+
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + Q G++++ L    LMR  G +PN  T T A++SCA L + + G   H ++I  G  L
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F+ +A+VDMY   G +  A +  ++M K  + V+WN+ I+G+     +   I+ F +M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMPKK-TVVAWNSMISGYGLKGDSISCIQLFKRM 299

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                     T SS++  CS    L   + +H   ++++ +S+V + SSL++ Y KCG  
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E AE +F  +  + VVSWN MI  Y   G+  +A+ LF +M    + P   TF +VL+AC
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S    ++ G+++  +++ E  +   E     ++D+  + G ++ A      LP +     
Sbjct: 420 SQLAALEKGEEI-HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVS- 477

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS 631
           W  +  A   H    +A  +  ++L+  + PD       LS
Sbjct: 478 WTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILS 518



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 181/352 (51%), Gaps = 19/352 (5%)

Query: 97  DDGCSNTVPVTCY--------SLESL-LDKQFVIE--------VLSYCSREECLELGRRY 139
           D  C NTV ++CY        +LE   L ++F  E         +S C+R   L  G   
Sbjct: 171 DVACWNTV-ISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  +  +    D F++++LV+MY KCG ++  + V +QMP   + + N +++GY      
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDS 289

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
                 F ++    V+P   T S+++ +C   + + EGK +H  T++ +  S   ++++L
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSL 349

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + +Y KCG +E AE++F+ + +  V+SW  +I+G+   G   + L L   MR+  ++P+ 
Sbjct: 350 MDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDA 409

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            TFT  L +C+ L     G   H  +I++ +   + V  A++DMY+  G + EA    K 
Sbjct: 410 ITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           + K    VSW + I  +  + +   A+E F++M++++   D  T+ +IL AC
Sbjct: 470 LPKR-DLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSAC 520


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 309/534 (57%), Gaps = 16/534 (2%)

Query: 209 LDGIDVQPNHYT---YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           LD +D +    T   Y +++  C    ++D+ + +HA     Q+     + N+L+ +Y K
Sbjct: 52  LDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCK 111

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG + DA  VF+G+  R++ SWT++I G+ Q+   ++ L L+  M      PN +TF   
Sbjct: 112 CGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASL 171

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +  +  +S +G   HA  +K       +VG+A++DMY+  G +  A     ++ +S +
Sbjct: 172 LKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKN 230

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWNA IAGF R    E  +  F++M RN      FTYSS+  A + + +L   + +H+
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            ++KS    +  VG+++++ Y K GS  DA +VF ++   DVV+WNSM+ A++Q G  R+
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+  FE+M   G+     TFL++L+ACSH GLV++G++ F+ M+KEY + PE  HY  +V
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD-MMKEYNLEPEIDHYVTVV 409

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGRAG L  AL+FI  +P+KPTA +W  L  +CR H + K+ +F +  + ELDPDD  
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
             V L N+YA  G    A   RK+MK   + KEP CSW+E+ N ++ F + + +H    +
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529

Query: 686 VYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           +Y+K +++  QI   G+  N           E++ ++ YHSE++A+ F LI++P
Sbjct: 530 IYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMP 583



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 181/353 (51%), Gaps = 1/353 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+R   L+  R  HA +  +   G  F+  SL+++Y KCG +     V   MP  D
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+AGYA+N + D+A      +     +PN +T++++L   G+ ++   G+Q+HA
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHA 189

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I GF + GD E 
Sbjct: 190 LTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGET 249

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   M+ +G +   +T++   ++ A +     G   HA +IK G  L  FVG  I+D
Sbjct: 250 TLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILD 309

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A+K    + K    V+WN+ +  F +     EA+  F +M +     ++ 
Sbjct: 310 MYAKSGSMIDARKVFDRVDKK-DVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           T+ SIL ACS    +   +Q    + +   E  +    ++++   + G   DA
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDA 421


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/622 (31%), Positives = 345/622 (55%), Gaps = 17/622 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHA-LITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVK 176
           V+ +L + +  + L  G+  HA L+ +     D  +T   SL+N+Y+KCG  K    +  
Sbjct: 26  VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAID 235
           +M   ++ S + L+ GY       +    F  L  +D   PN Y ++ +L+ C     + 
Sbjct: 86  RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVK 145

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EGKQ H   +K   L    V NAL+ MY +C  ++ A  + + +   +V S+ +I++   
Sbjct: 146 EGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALV 205

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   +  +++  M ++ +  +  T+   L  CA +R+  +G   HAQ++K G+    F
Sbjct: 206 ESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V + ++D Y   GE+  A+KQ   + +  + V+W A +  + +N   EE +  F++M   
Sbjct: 266 VSSTLIDTYGKCGEVLNARKQFDGL-RDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELE 324

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           D   +EFT++ +L AC+ L +LA  + +H RIV S F++++ VG++LI  Y+K G+ + +
Sbjct: 325 DTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSS 384

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VFS +   DV++WN+MI  YS +G  ++A+++F+ M+  G  P   TF+ VLSAC H 
Sbjct: 385 YNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHL 444

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI-SNLPIKPTAPIWR 594
            LVQ+G   F+ ++K++ + P   HY+CMV LLGRAG L+ A  F+ +   +K     WR
Sbjct: 445 ALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWR 504

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L  AC  H +  + + I++ ++++DP D   Y  LSNM+A+A       + RKLMK + 
Sbjct: 505 TLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERN 564

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
           I KEPG SW+++ N  + F S+  +H E  +++EK++QL+  I+ +G+            
Sbjct: 565 IKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVE 624

Query: 704 DNEKEDRVLYHSERLAVGFGLI 725
           D +KE  + +HSE+LA+ +GL+
Sbjct: 625 DEQKEGYLSHHSEKLALAYGLM 646


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/633 (33%), Positives = 340/633 (53%), Gaps = 26/633 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     L   +  H  + KT    D FV  SLVN+Y +CG+ +    +  +MP 
Sbjct: 82  VPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPE 141

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   L+ GY  N+    A   F+++  +   P+ YT   ML+ C +   ID GKQ+
Sbjct: 142 KNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQV 201

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  T+K    S T++ N+L  +Y K G +E     F+ +  +NVI+WT +I+   +  +Y
Sbjct: 202 HGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENY 261

Query: 301 -EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  L L   M +  + PNE+T T  ++ C +  + ++G        K G A    V  +
Sbjct: 262 TELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNS 321

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTEEAIEA 408
            + +Y   GE  EA +  +EM +  S ++WNA I+GF +             +  +A++ 
Sbjct: 322 TMYLYLRKGETEEAMRLFEEM-EDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKI 380

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  +VR+    D FT+SSIL  CS + +L   EQIH++ +K+ F S+V V S+L+  YNK
Sbjct: 381 FRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNK 440

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  E A + F ++    +V+W SMI  YSQ+GR   AI LFE M++ G +P   TF+++
Sbjct: 441 CGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSL 500

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACS++GLV++  + F+ M  EY I P   HY CM+D+  R G+L+ A  FI     +P
Sbjct: 501 LSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP 560

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L A CR H ++++A + + ++LEL P     YV L NMY   G   D    RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRK 620

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
           L K +++      SWI + +K+Y F + ++SH +  ++Y+ L+ L+++ + IG+      
Sbjct: 621 LSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNT 680

Query: 704 ---DNEKEDR-----VLYHSERLAVGFGLISLP 728
              D+E++ +     + +HSERLAV  GL+  P
Sbjct: 681 ELYDSEEDGKPAAGSLKHHSERLAVALGLLKAP 713



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 221/471 (46%), Gaps = 23/471 (4%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L  C    ++   K LH   +K   +    V+ +L+ +Y++CG  +DA ++F+ + 
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           ++NV++WTA+I G+  +      L +   M + G  P++YT    L++C +  N  +G  
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQ 200

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   IK G A    +G ++  +Y+  G +    +  K +    + ++W   I+    ++
Sbjct: 201 VHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRI-PDKNVITWTTMISACAEDE 259

Query: 401 K-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
             TE  +  F  M++ +   +EFT +S++  C     +   +Q+     K    +N+ V 
Sbjct: 260 NYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVK 319

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ---------NGRAR--KAII 508
           +S +  Y + G  E+A R+F ++    V++WN+MI  ++Q         + R+R  +A+ 
Sbjct: 320 NSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALK 379

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F  +V   ++P   TF ++LS CS    ++ G+++    +K  G L +    S +V++ 
Sbjct: 380 IFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKT-GFLSDVVVNSALVNMY 438

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVY 627
            + G +E A      +P + T   W  + +    H     A +     IL     +   +
Sbjct: 439 NKCGCIEYATKAFVEMPTR-TLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITF 497

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIYRF 673
           V+L +  + AGL  +A     +M+  E   EP     GC  I+++ ++ R 
Sbjct: 498 VSLLSACSYAGLVEEAMRYFDMMQ-NEYHIEPLMDHYGC-MIDMFVRLGRL 546



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 13/264 (4%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           + ++ V  N ++    R    +EA+     M++   +     Y  +L  C    SL   +
Sbjct: 43  QGSTQVLENGRLEAPPRPLDAQEAM----AMLKEGQSVQSAMYVPLLHRCIETGSLGGAK 98

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            +H  +VK+    ++ V +SL+  Y +CG+ +DA  +F ++   +VV+W ++I  Y+ N 
Sbjct: 99  ALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNS 158

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           +   A+ +F +M+  G  P++ T   +LSAC  S  +  G++V    +K YG     +  
Sbjct: 159 QPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIK-YGAASITSIG 217

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC---RCHSDLKMAEFISKQILE 618
           + +  L  ++G LE  +     +P K     W  + +AC     +++L +  F+     E
Sbjct: 218 NSLCRLYTKSGNLESGIRAFKRIPDK-NVITWTTMISACAEDENYTELGLNLFLDMLKGE 276

Query: 619 LDPDDAAVYVTLSNMYAEAGLQAD 642
           + P++     TL+++ +  G   D
Sbjct: 277 VMPNE----FTLTSVMSLCGTSLD 296


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/590 (33%), Positives = 334/590 (56%), Gaps = 2/590 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VLS CS  E LE G++ H  + +     D  V   +++ Y KC  +K+   + 
Sbjct: 254 DRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLF 313

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++   D+ S   ++AG  +N+    A   F+++     +P+ +  +++L  CGSL A+ 
Sbjct: 314 NRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQ 373

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA  +K+   +   V N L+ MY KC  + +A  VF+ +   NV+S+ A+I G+ 
Sbjct: 374 KGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYS 433

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +     + L L   MR     P   TF   L   +SL    +    H  +IK G++L  F
Sbjct: 434 RQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSF 493

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G+A++D+YS    + +A+   +E+      V WNA  +G+ +  + EE+++ +  +  +
Sbjct: 494 AGSALIDVYSKCSCVGDARLVFEEI-YDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMS 552

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EFT+++++ A S + SL   +Q H++++K   + +  V +SL++ Y KCGS E++
Sbjct: 553 RLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEES 612

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            + FS     D+  WNSMI  Y+Q+G A KA+ +FE+M++EG++P   TF+ +LSACSH+
Sbjct: 613 HKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHA 672

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+  G   FESM K +GI P   HY+CMV LLGRAGK+  A  F+  +PIKP A +WR 
Sbjct: 673 GLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRS 731

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR    +++  + ++  +  DP D+  Y+ LSN++A  G+ A     R+ M M  +
Sbjct: 732 LLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRV 791

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            KEPG SWIEV N+++RF +++ +H +   +   L  L+ QI+  G+  N
Sbjct: 792 VKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYVPN 841



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 260/545 (47%), Gaps = 17/545 (3%)

Query: 109 YSLESLL-------------DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVT 155
           YS+E+LL             ++  +  V+  C++   L    + H  + K     D +V 
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
            SL++ YAK G +     +   +      +   ++AGYAK    + +   F ++   DV 
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVY 252

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ Y  S++L+ C  L  ++ GKQ+H   ++  +    +V N ++  Y+KC  ++    +
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKL 312

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  LV ++V+SWT +I G  Q+  +   + L   M   G  P+ +  T  L SC SL+  
Sbjct: 313 FNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQAL 372

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G   HA  IK  +   DFV   ++DMY+    +  A+K   ++  + + VS+NA I G
Sbjct: 373 QKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVF-DLVAAINVVSYNAMIEG 431

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + R  K  EA++ F +M  + +     T+ S+L   S L  L    QIH  I+K     +
Sbjct: 432 YSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLD 491

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
              GS+LI+ Y+KC    DA  VF ++   D+V WN+M   YSQ     +++ L++ + +
Sbjct: 492 SFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQM 551

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             ++P   TF AV++A S+   ++ GQ+ F + V + G+  +    + +VD+  + G +E
Sbjct: 552 SRLKPNEFTFAAVIAAASNIASLRHGQQ-FHNQVIKMGLDDDPFVTNSLVDMYAKCGSIE 610

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSD-LKMAEFISKQILELDPDDAAVYVTLSNMY 634
            +    S+   +  A  W  + +    H D  K  E   + I+E    +   +V L +  
Sbjct: 611 ESHKAFSSTNQRDIA-CWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSAC 669

Query: 635 AEAGL 639
           + AGL
Sbjct: 670 SHAGL 674



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 142/582 (24%), Positives = 266/582 (45%), Gaps = 59/582 (10%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK-L 209
           D F+  +L++ Y+K         +   MP+ ++ + + +++ Y ++    +A   F + +
Sbjct: 86  DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
                +PN Y  ++++  C  L  + +  QLH   +K  ++    V  +L+  Y K G +
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           ++A  +F+GL  +  ++WTAII G+ + G  E  L+L   MRE  + P+ Y  +  L++C
Sbjct: 206 DEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSAC 265

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           + L     G   H  V++RG  +   V   I+D Y    ++   +K    +      VSW
Sbjct: 266 SMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRL-VDKDVVSW 324

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
              IAG  +N    +A++ F +MVR     D F  +S+L +C  L +L    Q+H+  +K
Sbjct: 325 TTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIK 384

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              +++  V + LI+ Y KC S  +A +VF  + A +VVS+N+MI+ YS+  +  +A+ L
Sbjct: 385 VNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDL 444

Query: 510 FEKMVVEGIRPTNSTFL-----------------------------------AVLSACSH 534
           F +M +    PT  TF+                                   A++   S 
Sbjct: 445 FREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSK 504

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI--ALIFISNLP---IKPT 589
              V D + VFE  + +  I+   A +S      G + +LE   +L    +L    +KP 
Sbjct: 505 CSCVGDARLVFEE-IYDRDIVVWNAMFS------GYSQQLENEESLKLYKDLQMSRLKPN 557

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              +  + AA    + L+  +    Q++++   DD  V  +L +MYA+ G     EE  K
Sbjct: 558 EFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCG---SIEESHK 614

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
                   ++  C     +N +   ++Q+   ++  +V+E++
Sbjct: 615 AFSSTN-QRDIAC-----WNSMISTYAQHGDAAKALEVFERM 650



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 169/315 (53%), Gaps = 3/315 (0%)

Query: 238 KQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           K++HA  + L +      + N LL  Y K  +  DA+ +F+ +  RN+++W+++++ + Q
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 297 HGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           HG   + L L C  MR     PNEY     + +C  L N       H  V+K G     +
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVY 190

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGT+++D Y+  G + EA+     + K  ++V+W A IAG+ +  ++E +++ F+QM   
Sbjct: 191 VGTSLIDFYAKRGYVDEARLIFDGL-KVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREG 249

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           D   D +  SS+L ACS+L  L   +QIH  +++  F+ +V V + +I+ Y KC   +  
Sbjct: 250 DVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTG 309

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F++L   DVVSW +MI    QN     A+ LF +MV +G +P      +VL++C   
Sbjct: 310 RKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSL 369

Query: 536 GLVQDGQKVFESMVK 550
             +Q G++V    +K
Sbjct: 370 QALQKGRQVHAYAIK 384



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 85/161 (52%), Gaps = 4/161 (2%)

Query: 441 EQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
           ++IH+ IV   F + +V + ++L+ AY+K     DA+++F  +   ++V+W+SM+  Y+Q
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           +G + +A++LF + +       N   LA V+ AC+  G +    ++   +VK  G + + 
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKG-GFVQDV 189

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
              + ++D   + G ++ A +    L +K T   W  + A 
Sbjct: 190 YVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVT-WTAIIAG 229


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/531 (36%), Positives = 308/531 (58%), Gaps = 13/531 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L+G  +  +   Y+T+L  C     + +G+ +H   ++  +     ++N LL MY KCG 
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E+A  VF+ + +R+ ++WT +I+G+ QH      L L   M   G  PNE+T +  + +
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A+ R    G+  H   +K G      VG+A++D+Y+  G + +A+     + +S + VS
Sbjct: 162 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVS 220

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAG  R   TE+A+E F  M+R       F+Y+S+  ACS    L   + +H+ ++
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 280

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS  +     G++L++ Y K GS  DA ++F +L   DVVSWNS++ AY+Q+G   +A+ 
Sbjct: 281 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVC 340

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GIRP   +FL+VL+ACSHSGL+ +G   +E M K+ GI+ E  HY  +VDLL
Sbjct: 341 WFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLL 399

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL FI  +PI+PTA IW+ L  ACR H + ++  + ++ + ELDPDD   +V
Sbjct: 400 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 459

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G   DA   RK MK   + KEP CSW+E+ N I+ F + ++ H +  ++  
Sbjct: 460 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 519

Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLP 728
           K ++++ +I+++G          H D  E+E  + YHSE++A+ F L++ P
Sbjct: 520 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTP 570



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 146/594 (24%), Positives = 254/594 (42%), Gaps = 57/594 (9%)

Query: 85  STRNDSFPDGFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLSYCSREECLELGRRYHA 141
           S R  S P    +D    ++      LE     +D++F   +L  C+  + L  GR  H 
Sbjct: 16  SRRLHSLPAPLSEDSDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHG 75

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
            + ++    D  +  +L+NMYAKCG ++    V  +MP  D  +   L++GY+++     
Sbjct: 76  HLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFD 135

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A   F ++      PN +T S+++    +      G QLH   +K  + S   V +ALL 
Sbjct: 136 ALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 195

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           +Y + G+M+DA+ VF+ L  RN +SW A+I G  +    EK L L   M  +G  P+ ++
Sbjct: 196 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFS 255

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           +     +C+S      G   HA +IK G  L  F G  ++DMY+  G I +A+K    + 
Sbjct: 256 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 315

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           K    VSWN+ +  + ++    EA+  F +M R     +E ++ S+L ACS    L    
Sbjct: 316 KR-DVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGW 374

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-WNSMIKA---- 496
             +  + K           ++++   + G    A R   ++      + W +++ A    
Sbjct: 375 HYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434

Query: 497 ------------------------------YSQNGRARKAIILFEKMVVEGIRP------ 520
                                         Y+  GR   A  + +KM   G++       
Sbjct: 435 KNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSW 494

Query: 521 ---TNSTFLAVLSACSHSGLVQDGQKVFESM--VKEYGILPEEAHYSCMVDLLGRAGKLE 575
               N+  + V +   H    +  +K  E +  +KE G +P+ +H    VD   R   L+
Sbjct: 495 VEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQ 554

Query: 576 -----IALIF-ISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILELDPD 622
                IAL F + N P   T  I + +     CHS +K+A + + ++I+  D +
Sbjct: 555 YHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTN 608


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/562 (33%), Positives = 318/562 (56%), Gaps = 11/562 (1%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  ++ S   +++G ++N+ F +A   F  +      P  + +S+ +  C SL +I+ G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           KQ+H   +K    S+  V + L  MY KCG M DA  VFE +  ++ +SWTA+I+G+ + 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G++E+ L     M ++ +  +++     L +C +L+    G   H+ V+K G     FVG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A+ DMYS  G++  A        +  + VS+   I G+   ++ E+ +  F ++ R   
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +EFT+SS++KAC+   +L    Q+H++++K  F+ +  V S L++ Y KCG  E A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F ++     ++WNS++  + Q+G  + AI +FE+MV  G++P   TF+++L+ CSH+GL
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V++G   F SM K YG++P E HYSC++DLLGRAG+L+ A  FI+ +P +P A  W    
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H D +M +  ++++++L+P ++   V LSN+YA      D    R  M+   + K
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
            PG SW++V  K + F +++ SH     +YEKL  L+ QI+  G+            D+ 
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSM 540

Query: 707 KEDRVLYHSERLAVGFGLISLP 728
           KE  +  HSER+AV F LIS+P
Sbjct: 541 KEKLLHRHSERIAVAFALISMP 562



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 209/419 (49%), Gaps = 30/419 (7%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    +E+G++ H L  K  +  + FV ++L +MY+KCG +     V ++MP  D  S 
Sbjct: 51  CASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSW 110

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             ++ GY+K   F++A   F K+   +V  + +   + L  CG+L A   G+ +H+  +K
Sbjct: 111 TAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVK 170

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAIINGFKQHGDYEKPL 304
           L + S   V NAL  MY K G ME A +VF G+    RNV+S+T +I+G+ +    EK L
Sbjct: 171 LGFESDIFVGNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGL 229

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
            +   +R  GI+PNE+TF+  + +CA+      G   HAQV+K       FV + +VDMY
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 289

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
              G + +A +   E+G   + ++WN+ ++ F ++   ++AI+ F +MV      +  T+
Sbjct: 290 GKCGLLEQAIQAFDEIG-DPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITF 348

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFE--------SNVHVG----SSLIEAYNKCGSW 472
            S+L  CS           H+ +V+   +          V  G    S +I+   + G  
Sbjct: 349 ISLLTGCS-----------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRL 397

Query: 473 EDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           ++A+   +++    +   W S + A   +G      +  EK+V   + P NS  L +LS
Sbjct: 398 KEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLV--KLEPKNSGALVLLS 454



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 26/349 (7%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNT 103
           A + AC++F + P +  +S + +I +GY  I E   +   +    D              
Sbjct: 91  AMFDACKVFEEMPCKDEVSWTAMI-DGYSKIGEFEEALLAFKKMIDE------------- 136

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
                   E  +D+  +   L  C   +  + GR  H+ + K     D FV  +L +MY+
Sbjct: 137 --------EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 188

Query: 164 KCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           K GD++S   V        ++ S  CL+ GY +    ++  S F++L    ++PN +T+S
Sbjct: 189 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 248

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           +++  C + +A+++G QLHAQ MK+ +     VS+ L+ MY KCG++E A   F+ +   
Sbjct: 249 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 308

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYM 340
             I+W ++++ F QHG  +  +++   M + G+ PN  TF   L  C  A L    + Y 
Sbjct: 309 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDY- 367

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           F++     G+  G+   + ++D+    G + EAK+ +  M    ++  W
Sbjct: 368 FYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 95/229 (41%), Gaps = 23/229 (10%)

Query: 96  IDDGCSNTVPVTC----YSLESLLDKQFVIEV-----------------LSYCSREECLE 134
           ID  C N V  TC    Y     ++K   + V                 +  C+ +  LE
Sbjct: 202 IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 261

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            G + HA + K     D FV++ LV+MY KCG ++  +    ++      + N L++ + 
Sbjct: 262 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFG 321

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYLSKT 253
           ++ L   A   F ++    V+PN  T+ ++L  C     ++EG    ++       +   
Sbjct: 322 QHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGE 381

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
              + ++ +  + G +++A+     +  + N   W + +   + HGD E
Sbjct: 382 EHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/602 (34%), Positives = 337/602 (55%), Gaps = 13/602 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA + K     D FV  +L++ Y+ CG++ +   V   + + D+ S   ++A YA+N   
Sbjct: 127 HAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCH 186

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + +   F ++  +  +PN++T S  L  C  L A   GK +H   +K+ Y     V  AL
Sbjct: 187 EDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIAL 246

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID-PN 318
           L +Y K G + +A+  FE + + ++I W+ +I+ + Q    ++ L L C MR+  +  PN
Sbjct: 247 LELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPN 306

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            +TF   L +CASL   ++G   H+ V+K G+    FV  A++D+Y+  GEI E   +L 
Sbjct: 307 NFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEI-ENSVKLF 365

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
                 + V+WN  I G+ +    E+A+  FS M+  D    E TYSS+L+A + L +L 
Sbjct: 366 TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALE 425

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              QIHS  +K+ +  +  V +SLI+ Y KCG  +DA   F ++   D VSWN++I  YS
Sbjct: 426 PGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYS 485

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G   +A+ LF+ M     +P   TF+ VLSACS++GL+  G+  F+SM+++YGI P  
Sbjct: 486 IHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCI 545

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+CMV LLGR+G+ + A+  I  +P +P+  +WR L  AC  H +L + +  ++++LE
Sbjct: 546 EHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLE 605

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           ++P D A +V LSNMYA A    +    RK MK K++ KEPG SW+E    ++ F   + 
Sbjct: 606 MEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDT 665

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISL 727
           SH  +  ++  L+ L ++  D G+            D+EKE  +  HSERLA+ FGLI +
Sbjct: 666 SHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQI 725

Query: 728 PA 729
           P+
Sbjct: 726 PS 727



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 241/470 (51%), Gaps = 6/470 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H  I K     D F    L+N Y   G ++    +  +MP  +  S   L  G+++
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +  F +A    L+L     + N + ++T+L +  S+   D    +HA   KL + +   V
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             AL+  Y  CG ++ A  VF+G+  ++++SWT ++  + ++  +E  L L C MR  G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN +T + AL SC  L    +G   H   +K       +VG A++++Y+  GEI EA++
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSILKACSLL 434
             +EM K    + W+  I+ + ++ K++EA+E F +M ++     + FT++S+L+AC+ L
Sbjct: 262 FFEEMPKD-DLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASL 320

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             L    QIHS ++K   +SNV V ++L++ Y KCG  E++ ++F+  T  + V+WN++I
Sbjct: 321 VLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE-YG 553
             Y Q G   KA+ LF  M+   I+PT  T+ +VL A +    ++ G+++    +K  Y 
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYN 440

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
              +    + ++D+  + G+++ A +    +  K     W  L      H
Sbjct: 441 --KDSVVANSLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALICGYSIH 487



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 150/280 (53%), Gaps = 13/280 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L LG + H+ + K  +  + FV+ +L+++YAKCG+I++ V +       +
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKN 372

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N ++ GY +    ++A + F  + G+D+QP   TYS++L    SL A++ G+Q+H+
Sbjct: 373 EVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS 432

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+K  Y   + V+N+L+ MY KCG ++DA   F+ + +++ +SW A+I G+  HG   +
Sbjct: 433 LTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGME 492

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M++    PN+ TF   L++C     S+ G +   +   + M L D+     ++
Sbjct: 493 ALNLFDMMQQSNSKPNKLTFVGVLSAC-----SNAGLLDKGRAHFKSM-LQDYGIEPCIE 546

Query: 363 MYSGL-------GEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            Y+ +       G+  EA K + E+    S + W A +  
Sbjct: 547 HYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGA 586


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/646 (31%), Positives = 348/646 (53%), Gaps = 43/646 (6%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA-SCNCLLAGYA 194
            ++ HA I +T++     ++ +++++Y+    +   + +   +P      +   ++  Y 
Sbjct: 24  AKQLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
            + LF  + SFF+++      P+H  + ++L  C  +  +  G+ +H   ++L       
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142

Query: 255 VSNALLTMYIKCGMMEDAES-----------------------------VFEGLVQRNVI 285
             NAL+ MY K   +E+  +                             VFE + +R+++
Sbjct: 143 TCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIV 202

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW  +I+G  Q+G +E  L +V  M    + P+ +T +  L   A   N   G   H   
Sbjct: 203 SWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYA 262

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+ G     F+G++++DMY+    + +   ++  M      +SWN+ IAG  +N   +E 
Sbjct: 263 IRNGYDADVFIGSSLIDMYAKCTRV-DDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F QM+      +  ++SSI+ AC+ L +L   +Q+H  I++S+F+ NV + S+L++ 
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 381

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCG+   A  +F ++   D+VSW +MI  Y+ +G A  AI LF++M VEG++P    F
Sbjct: 382 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 441

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +AVL+ACSH+GLV +  K F SM ++Y I+P   HY+ + DLLGR G+LE A  FIS++ 
Sbjct: 442 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           I+PT  +W  L AACR H ++++AE +SK++  +DP +   YV LSN+Y+ AG   DA +
Sbjct: 502 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 561

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG---- 701
            R  M+ K + K+P CSWIE+ NK++ F + +KSH    ++ E LK L++Q+E  G    
Sbjct: 562 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 621

Query: 702 -----HTDNEKEDRVLY--HSERLAVGFGLISLPAKNKFECSRTLE 740
                H   E++ R L   HSERLA+ FG+IS PA      ++ L 
Sbjct: 622 TTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 667



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 170/357 (47%), Gaps = 30/357 (8%)

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           T+L    S+ +  + KQLHAQ ++    S + +S  +L++Y    ++ D+  +F  L   
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLS-TILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 283 -NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
              ++W +II  +  HG +   L     M   G  P+   F   L SC  +++   G   
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK--------------------------- 374
           H  +I+ GM    +   A+++MYS    + E                             
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188

Query: 375 -KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            +++ EM      VSWN  I+G  +N   E+A+    +M   D   D FT SS+L   + 
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             +L   ++IH   +++ ++++V +GSSLI+ Y KC   +D+ RVF  L   D +SWNS+
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           I    QNG   + +  F++M++  I+P + +F +++ AC+H   +  G+++   +++
Sbjct: 309 IAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 365



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 210/492 (42%), Gaps = 67/492 (13%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK------ 169
           D      VL  C+  + L  G   H  I +  +  D +   +L+NMY+K   ++      
Sbjct: 105 DHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYK 164

Query: 170 -----------------------SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF 206
                                  S+  V + MP  DI S N +++G A+N + + A    
Sbjct: 165 KVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMV 224

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
            ++   D++P+ +T S++L I      + +GK++H   ++  Y +   + ++L+ MY KC
Sbjct: 225 REMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKC 284

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             ++D+  VF  L Q + ISW +II G  Q+G +++ L+    M    I PN  +F+  +
Sbjct: 285 TRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIM 344

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            +CA L   H+G   H  +I+       F+ +A+VDMY+  G I  A+    +M +    
Sbjct: 345 PACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKM-ELYDM 403

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           VSW A I G+  +    +AI  F +M       +   + ++L ACS           H+ 
Sbjct: 404 VSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS-----------HAG 452

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +V               EA+    S     R+   L     V+         + GR  +A
Sbjct: 453 LVD--------------EAWKYFNSMTQDYRIIPGLEHYAAVA-----DLLGRVGRLEEA 493

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMV 565
                 M +E   PT S +  +L+AC     ++  +KV +   K + + P+    Y  + 
Sbjct: 494 YEFISDMHIE---PTGSVWSTLLAACRVHKNIELAEKVSK---KLFTVDPQNIGAYVLLS 547

Query: 566 DLLGRAGKLEIA 577
           ++   AG+ + A
Sbjct: 548 NIYSAAGRWKDA 559


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/748 (29%), Positives = 382/748 (51%), Gaps = 91/748 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN---DSFPDGFIDDGCSNTV 104
           A +LF + P R  +++ + + +GY   ++   S   + + +   DS P+ F       T 
Sbjct: 90  AVELFGRMPAR-DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAF-------TF 141

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
                S  +L ++   +++L                 ++ K     D  V A+LV+M+ +
Sbjct: 142 AYAMKSCGALGERSLALQLL----------------GMVQKFGSQDDSDVAAALVDMFVR 185

Query: 165 CG--DIKS-----------------MVAVVK------------QMPYLDIASCNCLLAGY 193
           CG  D+ S                 +V  VK             MP  D+ S N +++  
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           +++    +A    + +    V+ +  TY++ L  C  LS++  GKQLHAQ ++       
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V++AL+ +Y KCG  ++A+ VF  L  RN ++WT +I GF QHG + + + L   MR +
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY--------- 364
            +  +++     ++ C S  +  +G   H+  +K G      V  +++ MY         
Sbjct: 366 LMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSA 425

Query: 365 ----------------------SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
                                 S +G I +A++    M  + + ++WNA +  + ++   
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGM-STKNVITWNAMLGAYIQHGAE 484

Query: 403 EEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           E+ +  ++ M+   D   D  TY ++ K C+ L +    +QI  R VK     +  V ++
Sbjct: 485 EDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA 544

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           +I  Y+KCG   +A +VF  L   D+VSWN+MI  YSQ+G  ++AI +F+ ++  G +P 
Sbjct: 545 VITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPD 604

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             +++AVLS CSHSGLVQ+G+  F+ M + + I P   H+SCMVDLLGRAG L  A   I
Sbjct: 605 YISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLI 664

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +P+KPTA +W  L +AC+ H + ++AE  +K + ELD  D+  Y+ ++ +YA+AG   
Sbjct: 665 DEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSD 724

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           D+ + RKLM+ K I K PG SW+EV NK++ F + + SH ++  + +KL +LM++I  +G
Sbjct: 725 DSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLG 784

Query: 702 HTDNEKEDRVLYHSERLAVGFGLISLPA 729
           +   +     ++HSE+LAV FGL+SLPA
Sbjct: 785 YVRTDSPRSEIHHSEKLAVAFGLMSLPA 812



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 207/436 (47%), Gaps = 37/436 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N Y K G +   V +  +MP  D+AS N L++GY ++  +  +   F+ +    D  P
Sbjct: 77  MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSP 136

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-------- 268
           N +T++  +  CG+L       QL     K      + V+ AL+ M+++CG         
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF 196

Query: 269 -----------------------MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                  ++ A  +F+ + +R+V+SW  +++   Q G   + L 
Sbjct: 197 VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +V  M+  G+  +  T+T +L +CA L +   G   HAQVI+    +  +V +A+V++Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EAK     +    ++V+W   IAGF ++    E++E F+QM       D+F  +
Sbjct: 317 KCGCFKEAKGVFNSL-HDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALA 375

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++  C     L    Q+HS  +KS     V V +SLI  Y KC + + AE +F  +   
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEK 435

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW SMI A+SQ G   KA   F+ M  + +   N    A+L A    G  +DG +++
Sbjct: 436 DIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWN----AMLGAYIQHGAEEDGLRMY 491

Query: 546 ESMVKEYGILPEEAHY 561
             M+ E  + P+   Y
Sbjct: 492 NVMLSEKDVRPDWVTY 507



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 138/307 (44%), Gaps = 31/307 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR-LVCLMREDGI 315
           N +L  Y+K G + DA  +F  +  R+V SW  +++G+ Q   Y   L   V + R    
Sbjct: 75  NVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDS 134

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN +TF  A+ SC +L    +       V K G      V  A+VDM+   G +  A +
Sbjct: 135 SPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASR 194

Query: 376 ------------------------------QLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
                                         +L +       VSWN  ++   ++ +  EA
Sbjct: 195 LFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++    M       D  TY+S L AC+ L SL   +Q+H++++++    + +V S+L+E 
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVEL 314

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCG +++A+ VF+ L   + V+W  +I  + Q+G   +++ LF +M  E +       
Sbjct: 315 YAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFAL 374

Query: 526 LAVLSAC 532
             ++S C
Sbjct: 375 ATLISGC 381



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/316 (21%), Positives = 143/316 (45%), Gaps = 68/316 (21%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL---- 377
           F  AL SC +          H +++  G+A   F+   ++  Y   G + +A++ L    
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDI 66

Query: 378 ---------------KEMGKSASSV------------SWNAQIAGFFRNQKTEEAIEAFS 410
                           ++G+ + +V            SWN  ++G+F++Q+   ++E+F 
Sbjct: 67  AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126

Query: 411 QMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            M R+ D++ + FT++  +K+C  L   +   Q+   + K   + +  V ++L++ + +C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186

Query: 470 GSWEDAERVFSQLTAA-------------------------------DVVSWNSMIKAYS 498
           G+ + A R+F ++                                  DVVSWN M+ A S
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+GR R+A+ +   M  +G+R  ++T+ + L+AC+    ++ G+++   +++    LP  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN---LPCI 303

Query: 559 AHY--SCMVDLLGRAG 572
             Y  S +V+L  + G
Sbjct: 304 DPYVASALVELYAKCG 319


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/617 (32%), Positives = 342/617 (55%), Gaps = 36/617 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C+    L+ G + H+ + K  +  D  +  SL+++Y KCGD+++ + +       +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTN 309

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +L  + +     ++F  F ++    ++PN +TY  +L  C     ID G+Q+H+
Sbjct: 310 VVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHS 369

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  + S   VS  L+ MY K G +E A  V E L +++V+SWT++I G+ QH   + 
Sbjct: 370 LSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKD 429

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M++ GI P+      A++ CA ++    G   HA+V   G +    +  A+V+
Sbjct: 430 ALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVN 489

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G I EA    +E+ +    ++WN  ++GF ++   EEA++ F +M ++    + F
Sbjct: 490 LYARCGRIREAFSSFEEI-EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S L A + L  +   +QIH+R++K+       VG++LI  Y KCGS+EDA+  FS++
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEM 608

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  + VSWN++I + SQ+GR  +A+  F++M  EG+                        
Sbjct: 609 SERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGL------------------------ 644

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  +YGI P   HY+C++D+ GRAG+L+ A  F+  +PI   A +WR L +AC+ 
Sbjct: 645 SYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKV 704

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  +K +LEL+P D+A YV LSN YA  G  A+ ++ RK+M+ + + KEPG S
Sbjct: 705 HKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRS 764

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---V 711
           WIEV N ++ FF  ++ H    ++Y  L  +  ++  +G+         D E+E R    
Sbjct: 765 WIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTD 824

Query: 712 LYHSERLAVGFGLISLP 728
           L HSE+LAV FGL+SLP
Sbjct: 825 LVHSEKLAVTFGLMSLP 841



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 244/482 (50%), Gaps = 3/482 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C++ E    GR  HA   K   C + FV  +L+ +Y +CG  +    V   MP+ D
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L++G+A+ A  + A   F ++    + P+  T S++LA C SL  + +G QLH+
Sbjct: 209 TVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHS 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K    S   +  +LL +Y+KCG +E A  +F    + NV+ W  I+  F Q  D  K
Sbjct: 269 YLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAK 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L C M+  GI PN++T+   L +C       +G   H+  +K G     +V   ++D
Sbjct: 329 SFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLID 388

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +A++ L EM K    VSW + IAG+ +++  ++A+ AF +M +     D  
Sbjct: 389 MYSKYGWLEKARRVL-EMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNI 447

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S +  C+ + ++    QIH+R+  S +  +V + ++L+  Y +CG   +A   F ++
Sbjct: 448 GLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEI 507

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D ++WN ++  ++Q+G   +A+ +F +M   G++    TF++ LSA ++   ++ G+
Sbjct: 508 EHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGK 567

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   ++K       E   + ++ L G+ G  E A +  S +  +     W  +  +C  
Sbjct: 568 QIHARVIKTGHSFETEVG-NALISLYGKCGSFEDAKMEFSEMSERNEVS-WNTIITSCSQ 625

Query: 603 HS 604
           H 
Sbjct: 626 HG 627



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 267/577 (46%), Gaps = 24/577 (4%)

Query: 127 CSREECLELGRRY------HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           C+   C   GRR+      HA      +  D+ V   L+++Y+K G +     V +++  
Sbjct: 46  CALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSA 105

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   +L+GYA+N L ++A   + ++    V P  Y  S++L+ C       +G+ +
Sbjct: 106 RDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSV 165

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ  K  + S+T V NAL+T+Y++CG    AE VF  +  R+ +++  +I+G  Q    
Sbjct: 166 HAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHG 225

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  L +   M+  G+ P+  T +  LA+CASL +   G   H+ + K GM+    +  ++
Sbjct: 226 EHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSL 285

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G++ E    +  +G   + V WN  +  F +     ++ E F QM       +
Sbjct: 286 LDLYVKCGDV-ETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPN 344

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FTY  IL+ C+    +   EQIHS  VK+ FES+++V   LI+ Y+K G  E A RV  
Sbjct: 345 QFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   DVVSW SMI  Y Q+   + A+  F++M   GI P N    + +S C+    ++ 
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQ 464

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL---F 597
           G ++  + V   G   + + ++ +V+L  R G++  A      +  K     W  L   F
Sbjct: 465 GLQI-HARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI-TWNGLVSGF 522

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAA--VYVTLSNMYAEAGL----QADAEEQRKLMK 651
           A    H      E   K  + +D       V+  +S + A A L    Q      R +  
Sbjct: 523 AQSGLH------EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT 576

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
                 E G + I +Y K   F       SEM +  E
Sbjct: 577 GHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 9/270 (3%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC-SLLPSLATC 440
           + A+S+ W+  +AGF   +   + +  F+   R         ++  L+AC          
Sbjct: 4   RGAASLGWS--LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVV 61

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            +IH++ +      +  VG+ LI+ Y+K G    A RVF +L+A D VSW +M+  Y+QN
Sbjct: 62  PEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQN 121

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   +A+ L+ +M   G+ PT     +VLS+C+ + L   G+ V     K+ G   E   
Sbjct: 122 GLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQ-GFCSETFV 180

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQILEL 619
            + ++ L  R G   +A     ++P + T      +    +C H +  +  F   Q   L
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGL 240

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            PD     VT+S++ A      D ++  +L
Sbjct: 241 SPD----CVTISSLLAACASLGDLQKGTQL 266


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/657 (32%), Positives = 347/657 (52%), Gaps = 30/657 (4%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +AC +F++ P+R   S + +I                 ST +  F DGF           
Sbjct: 119 AACGVFDEMPQRNVFSWTVMIVG---------------STEHGLFFDGF---------KF 154

Query: 107 TCYSLES--LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
            C  L S  L DK     ++  C   + LELG+  HA I         FV+ SL+NMYAK
Sbjct: 155 FCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAK 214

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G I+    V   M   +  S N +++G   N L  +AF  F+++      PN YT  ++
Sbjct: 215 LGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSV 274

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-GLVQRN 283
               G L  ++ GK++     +L       V  AL+ MY KCG + DA SVF+   +   
Sbjct: 275 SKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCG 334

Query: 284 V-ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           V   W A+I+G+ Q G  ++ L L   M ++GI  + YT+     + A+ ++   G + H
Sbjct: 335 VNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVH 394

Query: 343 AQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
             V+K G+ L    V  AI D YS  G + + +K    M +    VSW   +  + ++  
Sbjct: 395 GMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSL 453

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            EEA+  F  M     A ++FT+SS+L +C+ L  L    Q+H  + K+  ++   + S+
Sbjct: 454 GEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESA 513

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI+ Y KCGS  +A +VF +++  D+VSW ++I  Y+Q+G    A+ LF +M + GI+  
Sbjct: 514 LIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKAN 573

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T L VL ACSH G+V++G   F+ M   YG++PE  HY+C++DLLGR G+L+ A+ FI
Sbjct: 574 AVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFI 633

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +P++P   +W+ L   CR H ++++ E  +++IL + P+ +A YV LSN Y E G   
Sbjct: 634 RKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYE 693

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           D    R +MK + + KEPG SWI V  ++++F+S ++ H +  ++Y KL++L ++I+
Sbjct: 694 DGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 244/493 (49%), Gaps = 12/493 (2%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVV 175
           Q +I+VL  C+ +  +   +  H L+ K+       +       ++Y+KC + ++   V 
Sbjct: 65  QDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVF 124

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  ++ S   ++ G  ++ LF   F FF ++    + P+ + YS ++  C  L +++
Sbjct: 125 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 184

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +HAQ +   + +   VS +LL MY K G +ED+  VF  + + N +SW A+I+G  
Sbjct: 185 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 244

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G + +   L   M+     PN YT      +   L + +MG        + G+     
Sbjct: 245 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVL 304

Query: 356 VGTAIVDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           VGTA++DMYS  G + +A+            +  WNA I+G+ ++  ++EA+E + QM +
Sbjct: 305 VGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 364

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWE 473
           N    D +TY S+  A +   SL     +H  ++K   +   V V +++ +AY+KCG  E
Sbjct: 365 NGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLE 424

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           D  +VF ++   D+VSW +++ AYSQ+    +A+  F  M  EG  P   TF +VL +C+
Sbjct: 425 DVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCA 484

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIF--ISNLPIKPTA 590
               ++ G++V   + K  G+  E+   S ++D+  + G + E   +F  ISN    P  
Sbjct: 485 SLCFLEYGRQVHGLLCKA-GLDTEKCIESALIDMYAKCGSITEAGKVFDKISN----PDI 539

Query: 591 PIWRPLFAACRCH 603
             W  + +    H
Sbjct: 540 VSWTAIISGYAQH 552


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/634 (33%), Positives = 339/634 (53%), Gaps = 25/634 (3%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F + +L  C         +  H  + KT    + FV + LVN+YAKCG+++    V   M
Sbjct: 69  FYVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNM 128

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++ +   L+ G+ +N+    A   F ++      P+ YT S +L  C SL ++  G 
Sbjct: 129 LRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD 188

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q HA  +K       +V +AL ++Y KCG +EDA   F  + ++NVISWT+ ++    +G
Sbjct: 189 QFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNG 248

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              K LRL   M    I PNE+T T AL+ C  + +  +G   ++  IK G      V  
Sbjct: 249 APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRN 308

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-----------QKTEEAIE 407
           +++ +Y   G I EA +    M   AS V+WNA IAG  +             +  EA++
Sbjct: 309 SLLYLYLKSGCIVEAHRLFNRM-DDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALK 367

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            FS++  +    D FT SS+L  CS + ++   EQIH++ +K+ F S+V V +SLI  Y+
Sbjct: 368 LFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYS 427

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCGS E A + F +++   +++W SMI  +SQ+G +++A+ +FE M + G+RP   TF+ 
Sbjct: 428 KCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVG 487

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VLSACSH+G+V      FE M K+Y I P   HY CMVD+  R G+LE AL FI  +  +
Sbjct: 488 VLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYE 547

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
           P+  IW    A C+ H +L++  + ++Q+L L P D   YV L NMY  A    D    R
Sbjct: 548 PSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVR 607

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----- 702
           K+M+ +++ K    SWI + +K+Y F +  K+H +   + + L+ L+ +++++G+     
Sbjct: 608 KMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLES 667

Query: 703 --------TDNEKEDRVLYHSERLAVGFGLISLP 728
                    + +     +YHSE+LA+ FGL +LP
Sbjct: 668 VEISDEEEEEEKTSSPNIYHSEKLAITFGLENLP 701


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/635 (31%), Positives = 340/635 (53%), Gaps = 22/635 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  GR  HA +    +  +   + +L NMY KC        V  +MP  D
Sbjct: 22  LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGID--VQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + N ++AGYA+N L   A    +++ G +   +P+  T  ++L  C    A+   +++
Sbjct: 82  RVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREV 141

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++        VS A+L  Y KCG +E A +VF+ +  RN +SW A+I+G+  +G+ 
Sbjct: 142 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNA 201

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM-----FHAQVIKRGMALGDF 355
            + + L   M ++G+D  + +   AL +C  L     GY+      H  +++ G++    
Sbjct: 202 TEAMALFWRMVQEGVDVTDASVLAALQACGEL-----GYLDEVRRVHELLVRVGLSSNVS 256

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A++  Y+       A +   E+G   + +SWNA I GF +N+  E+A   F++M   
Sbjct: 257 VTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   D FT  S++ A + +        IH   ++ + + +V+V ++LI+ Y+KCG    A
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            R+F       V++WN+MI  Y  +G  + A+ LFE+M   G  P  +TFL+VL+ACSH+
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +GQK F SM K+YG+ P   HY  MVDLLGRAGKL+ A  FI N+PI+P   ++  
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           +  AC+ H ++++AE  ++ I EL P++   +V L+N+YA A +  D    R  M+ K +
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DN 705
            K PG S I++ N+++ F+S + +H     +Y +L +L+++I+D+G+           D+
Sbjct: 557 QKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIHDVEDD 616

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            K   +  HSE+LA+ +GLI        +  + L 
Sbjct: 617 VKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLR 651



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 163/321 (50%), Gaps = 4/321 (1%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P   T++ +L +C + + +  G+ +HAQ       S++  S AL  MY KC    DA  V
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR--EDGIDPNEYTFTVALASCASLR 333
           F+ +  R+ ++W A++ G+ ++G     +  V  M+  E G  P+  T    L +CA  R
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
             H     HA  ++ G+     V TA++D Y   G + EA + + +     +SVSWNA I
Sbjct: 134 ALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAV-EAARAVFDCMPVRNSVSWNAMI 192

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G+  N    EA+  F +MV+      + +  + L+AC  L  L    ++H  +V+    
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV-VSWNSMIKAYSQNGRARKAIILFEK 512
           SNV V ++LI  Y KC   + A +VF++L      +SWN+MI  ++QN     A  LF +
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 513 MVVEGIRPTNSTFLAVLSACS 533
           M +E +RP + T ++V+ A +
Sbjct: 313 MQLENVRPDSFTLVSVIPAVA 333



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 158/320 (49%), Gaps = 6/320 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  C+    L   R  HA   +  +     V+ ++++ Y KCG +++  AV 
Sbjct: 118 DSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVF 177

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSA 233
             MP  +  S N ++ GYA N    +A + F ++  +G+DV     +    L  CG L  
Sbjct: 178 DCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDV--TDASVLAALQACGELGY 235

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV-ISWTAIIN 292
           +DE +++H   +++   S  +V+NAL+T Y KC   + A  VF  L  +   ISW A+I 
Sbjct: 236 LDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMIL 295

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           GF Q+   E   RL   M+ + + P+ +T    + + A + +       H   I+  +  
Sbjct: 296 GFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ 355

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +V TA++DMYS  G +  A++ L +  +    ++WNA I G+  +   + A+E F +M
Sbjct: 356 DVYVLTALIDMYSKCGRVSIARR-LFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM 414

Query: 413 VRNDAACDEFTYSSILKACS 432
               +  +E T+ S+L ACS
Sbjct: 415 KGTGSLPNETTFLSVLAACS 434



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 5/168 (2%)

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++++LK C+    LAT   +H+++      S     ++L   Y KC    DA RVF ++
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIRPTNSTFLAVLSACSHSGLVQD 540
            + D V+WN+++  Y++NG    A+    +M  E  G RP + T ++VL AC+ +  +  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 541 GQKVFESMVKEYGILPEEAHYSCMV-DLLGRAGKLEIALIFISNLPIK 587
            ++V    ++    L E  + S  V D   + G +E A      +P++
Sbjct: 138 CREVHAFALR--AGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR 183


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 211/623 (33%), Positives = 350/623 (56%), Gaps = 27/623 (4%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H L  K     D +V ASL+++Y + G + +   +  +MP  D+ S N +++GY +
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +    +A +    L  +D      T  ++L+ C      + G  +H+ ++K    S+  V
Sbjct: 229 SGNAKEALTLSDGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL---MRE 312
           SN L+ +Y + G ++D + VF+ +  R++ISW +II  ++ +   E+PLR + L   MR 
Sbjct: 285 SNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELN---EQPLRAILLFQEMRL 341

Query: 313 DGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
             I P+  T  ++LAS  S L             +++G  L D  +G A+V MY+ LG +
Sbjct: 342 SRIQPDCLTL-ISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR--NDAACDEFTYSSIL 428
             A+     +  +   +SWN  I+G+ +N    EAIE ++ M     + + ++ T+ S+L
Sbjct: 401 DSARAVFNWL-PNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVL 459

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS   +L    ++H R++K+    +V VG+SL + Y KCG  +DA  +F Q+   + V
Sbjct: 460 PACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSV 519

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            WN++I  +  +G   KA++LF++M+ EG++P + TF+ +LSACSHSGLV +G+  FE M
Sbjct: 520 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMM 579

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             +YGI P   HY CMVDL GRAG+LEIAL FI ++P++P A IW  L +ACR H ++ +
Sbjct: 580 QTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDL 639

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
            +  S+ + E++P+    +V LSNMYA AG     +E R +   K + K PG S +EV N
Sbjct: 640 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDN 699

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSER 717
           K+  F++ N++H    ++Y +L  L ++++ +G+            D+EKE  ++ HSER
Sbjct: 700 KVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSER 759

Query: 718 LAVGFGLISLPAKNKFECSRTLE 740
           LA+ F LI+ PAK      + L 
Sbjct: 760 LAMAFALITTPAKTTIRIFKNLR 782



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 267/541 (49%), Gaps = 26/541 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +  YC+    L+  +  HA +  +    +  ++A LVN+Y   G++         + 
Sbjct: 57  VHTLFRYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIH 113

Query: 180 YLDIASCNCLLAGYAKNALFDQA---FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
             D+ + N +++GY +     +    FS F+   G+  QP++ T+ ++L  C +++   +
Sbjct: 114 NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGL--QPDYRTFPSVLKACRNVT---D 168

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G ++H   +K  ++    V+ +L+ +Y + G + +A  +F+ +  R++ SW A+I+G+ Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS-CASLRNSHMGYMFHAQVIKRGMALGDF 355
            G+ ++ L L      DG+   +    V+L S C    + + G   H+  IK G+    F
Sbjct: 229 SGNAKEALTL-----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V   ++D+Y+  G + + +K    M      +SWN+ I  +  N++   AI  F +M  +
Sbjct: 284 VSNKLIDLYAEFGSLKDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS 342

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHS-RIVKSKFESNVHVGSSLIEAYNKCGSWED 474
               D  T  S+    S L  +  C  +    + K  F  ++ +G++++  Y K G  + 
Sbjct: 343 RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNSTFLAVLSAC 532
           A  VF+ L   DV+SWN++I  Y+QNG A +AI ++  M  EG  I     T+++VL AC
Sbjct: 403 ARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPAC 462

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S +G ++ G K+   ++K  G+  +    + + D+ G+ G+L+ AL     +P   + P 
Sbjct: 463 SQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVP- 520

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           W  L A    H   + A  + K++L+  + PD    +VTL +  + +GL  + E   ++M
Sbjct: 521 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT-FVTLLSACSHSGLVDEGEWCFEMM 579

Query: 651 K 651
           +
Sbjct: 580 Q 580



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 94/184 (51%), Gaps = 4/184 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  CS+   L  G + H  + K  +  D FV  SL +MY KCG +   +++  Q+P 
Sbjct: 456 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR 515

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++    N L+A +  +   ++A   F ++    V+P+H T+ T+L+ C     +DEG+  
Sbjct: 516 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWC 575

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             + M+  Y    ++ +   ++ +Y + G +E A +  + + +Q +   W A+++  + H
Sbjct: 576 F-EMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVH 634

Query: 298 GDYE 301
           G+ +
Sbjct: 635 GNVD 638


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/670 (31%), Positives = 351/670 (52%), Gaps = 64/670 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C    C EL  +   L  K    GD  V  +LV+M+ +CG +     +  Q+    
Sbjct: 144 VMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 203

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV---------------------------- 214
           I   N +LAGYAK    D A  +F  +   DV                            
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263

Query: 215 ---QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
              + +  TY++ L  C  L ++  GKQLHA+ ++        V++AL+ +Y KCG  ++
Sbjct: 264 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 323

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A+ VF  L  RN +SWT +I G  Q+  + K + L   MR + +  +++     ++ C +
Sbjct: 324 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383

Query: 332 LRNSHMGYMFHAQVIKRG------------------------------MALGDFVG-TAI 360
             +  +G   H+  +K G                              M+  D V  T++
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAAC 419
           +  YS +G I +A++    M  + ++++WNA +  + ++   E+ ++ +S M+ + D   
Sbjct: 444 ITAYSQIGNIIKAREFFDGM-DTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  TY ++ + C+ + +    +QI    VK+    NV V ++ I  Y+KCG   +A+++F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             L   DVVSWN+MI  YSQ+G  ++A   F+ M+ +G +P   +++AVLS CSHSGLVQ
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+  F+ M + +GI P   H+SCMVDLLGRAG L  A   I  +P+KPTA +W  L +A
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H + ++AE  +K + ELD  D+  Y+ L+ +Y++AG   D+ + RKLM+ K I K P
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLA 719
           G SW+EV NK++ F + + SH ++  +  KL +LM++I  +G+   E     ++HSE+LA
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTESPRSEIHHSEKLA 802

Query: 720 VGFGLISLPA 729
           V FG++SLPA
Sbjct: 803 VAFGIMSLPA 812



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 210/437 (48%), Gaps = 39/437 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N YAK G +     +  +MP  D+AS N L++GY +   F      F+ +    D  P
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV- 275
           N +T+  ++  CG+L   +   QL     K  +     V  AL+ M+++CG ++ A  + 
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 276 ------------------------------FEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                         FE + +R+V+SW  +I    Q G   + L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           LV  M   G+  +  T+T +L +CA L +   G   HA+VI+    +  +V +A++++Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EAK+    + +  +SVSW   I G  + +   +++E F+QM     A D+F  +
Sbjct: 317 KCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++  C     L    Q+HS  +KS     + V +SLI  Y KCG  ++AE VFS ++  
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKV 544
           D+VSW SMI AYSQ G   KA   F     +G+   N+ T+ A+L A    G  +DG K+
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFF-----DGMDTRNAITWNAMLGAYIQHGAEEDGLKM 490

Query: 545 FESMVKEYGILPEEAHY 561
           + +M+ +  + P+   Y
Sbjct: 491 YSAMLSQKDVTPDWVTY 507



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/498 (23%), Positives = 212/498 (42%), Gaps = 82/498 (16%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD       L+ C+R   L  G++ HA + ++    D +V ++L+ +YAKCG  K    V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +   +  S   L+ G  +   F ++   F ++    +  + +  +T+++ C +   +
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+QLH+  +K  +     VSN+L+++Y KCG +++AE VF  + +R+++SWT++I  +
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447

Query: 295 K-------------------------------QHGDYEKPLRLV-CLMREDGIDPNEYTF 322
                                           QHG  E  L++   ++ +  + P+  T+
Sbjct: 448 SQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
                 CA +  + +G       +K G+ L   V  A + MYS  G I EA+K L ++  
Sbjct: 508 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK-LFDLLN 566

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               VSWNA I G+ ++   ++A + F  M+   A  D  +Y ++L  CS          
Sbjct: 567 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS---------- 616

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-----WNSMIKAY 497
            HS +V                        ++ +  F  +T    +S     ++ M+   
Sbjct: 617 -HSGLV------------------------QEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL-- 555
            + G   +A  L +KM    ++PT   + A+LSAC     +    ++ E   K    L  
Sbjct: 652 GRAGHLTEAKDLIDKMP---MKPTAEVWGALLSACK----IHGNDELAELAAKHVFELDS 704

Query: 556 PEEAHYSCMVDLLGRAGK 573
           P+   Y  +  +   AGK
Sbjct: 705 PDSGSYMLLAKIYSDAGK 722



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 206/477 (43%), Gaps = 48/477 (10%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           CG+LS  D  + L A   +   ++     N ++  Y K G + DAE +F+ + +R+V SW
Sbjct: 52  CGALS--DARRLLRADIKEPNVITH----NIMMNGYAKQGSLSDAEELFDRMPRRDVASW 105

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGID-PNEYTFTVALASCASLRNSHMGYMFHAQVI 346
             +++G+ Q   +   L     M   G   PN +TF   + SC +L    +         
Sbjct: 106 NTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFW 165

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA---------------------- 384
           K        V TA+VDM+   G +  A +   ++ +                        
Sbjct: 166 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 225

Query: 385 --------SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
                     VSWN  IA   ++ +  EA+    +M R     D  TY+S L AC+ L S
Sbjct: 226 YFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFS 285

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +Q+H+++++S  + + +V S+LIE Y KCGS+++A+RVF+ L   + VSW  +I  
Sbjct: 286 LGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGG 345

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
             Q     K++ LF +M  E +         ++S C +   +  G+++  S+  + G   
Sbjct: 346 SLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQL-HSLCLKSGHNR 404

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
                + ++ L  + G L+ A    S++  +        + A  +  + +K  EF     
Sbjct: 405 AIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDG-- 462

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQ-RKLMKMKEISKEPGCSWIEVYNKIYR 672
             +D  +A  +  +   Y + G + D  +    ++  K+++ +    W+  Y  ++R
Sbjct: 463 --MDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD----WV-TYVTLFR 512



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/384 (21%), Positives = 153/384 (39%), Gaps = 107/384 (27%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           CGS  A+   + LH + + +   S   + N LL  Y  CG + DA               
Sbjct: 14  CGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARR------------- 60

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
                                L+R D  +PN  T  +                       
Sbjct: 61  ---------------------LLRADIKEPNVITHNI----------------------- 76

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                       +++ Y+  G + +A++    M +     SWN  ++G+F+ ++  + +E
Sbjct: 77  ------------MMNGYAKQGSLSDAEELFDRMPRR-DVASWNTLMSGYFQARRFLDGLE 123

Query: 408 AFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            F  M R+ D+  + FT+  ++K+C  L       Q+     K  F  +  V ++L++ +
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMF 183

Query: 467 NKCGSWEDAERVFSQ-------------------------------LTAADVVSWNSMIK 495
            +CG  + A R+FSQ                               +   DVVSWN MI 
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           A SQ+GR R+A+ L  +M  +G+R  ++T+ + L+AC+    +  G+++   +++    L
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRS---L 300

Query: 556 PEEAHY--SCMVDLLGRAGKLEIA 577
           P+   Y  S +++L  + G  + A
Sbjct: 301 PQIDPYVASALIELYAKCGSFKEA 324



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF-SQLTAAD 486
           L++C    +LA    +H R+V     S V + ++L+ AY  CG+  DA R+  + +   +
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V++ N M+  Y++ G    A  LF++M    +   N+    ++S    +    DG + F 
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNT----LMSGYFQARRFLDGLETFV 126

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           SM +    LP    + C++   G  G  E+A
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/625 (32%), Positives = 332/625 (53%), Gaps = 14/625 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   +  VL  C       LG+  H  + K    GD FV  +L+ MY++ G +     +
Sbjct: 122 VDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLL 181

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++   D+ S + ++  Y ++ L D+A      +  + V+P+     ++  +   L+ +
Sbjct: 182 FDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADL 241

Query: 235 DEGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
             GK +HA  M+     K+ V    AL+ MY+KC  +  A  VF+GL + ++ISWTA+I 
Sbjct: 242 KLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIA 301

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +    +  + +RL   M  +G+ PNE T    +  C +     +G + HA  ++ G  L
Sbjct: 302 AYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTL 361

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              + TA +DMY   G++  A+       KS   + W+A I+ + +N   +EA + F  M
Sbjct: 362 SLVLATAFIDMYGKCGDVRSARSVFDSF-KSKDLMMWSAMISSYAQNNCIDEAFDIFVHM 420

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  +E T  S+L  C+   SL   + IHS I K   + ++ + +S ++ Y  CG  
Sbjct: 421 TGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDI 480

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           + A R+F++ T  D+  WN+MI  ++ +G    A+ LFE+M   G+ P + TF+  L AC
Sbjct: 481 DTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHAC 540

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SHSGL+Q+G+++F  MV E+G  P+  HY CMVDLLGRAG L+ A   I ++P++P   +
Sbjct: 541 SHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAV 600

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           +    AAC+ H ++K+ E+ +KQ L L+P  +   V +SN+YA A    D    R+ MK 
Sbjct: 601 FGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKD 660

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
           + I KEPG S IEV   ++ F   ++ H +  KVYE + ++ +++ED G+T         
Sbjct: 661 EGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHN 720

Query: 704 -DNEKEDRVL-YHSERLAVGFGLIS 726
            D EK+   L YHSE+LA+ +GLIS
Sbjct: 721 IDKEKKVSALNYHSEKLAMAYGLIS 745



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 206/439 (46%), Gaps = 7/439 (1%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           L+  Y KN     A   +  + G D + +++   ++L  C  + +   G+++H   +K  
Sbjct: 95  LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           +     V NAL+ MY + G +  A  +F+ +  ++V+SW+ +I  + + G  ++ L L+ 
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA--LGDFVGTAIVDMYSG 366
            M    + P+E          A L +  +G   HA V++ G     G  + TA++DMY  
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              +  A++    + K AS +SW A IA +       E +  F +M+      +E T  S
Sbjct: 275 CENLAYARRVFDGLSK-ASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLS 333

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ++K C    +L   + +H+  +++ F  ++ + ++ I+ Y KCG    A  VF    + D
Sbjct: 334 LVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKD 393

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           ++ W++MI +Y+QN    +A  +F  M   GIRP   T +++L  C+ +G ++ G K   
Sbjct: 394 LMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG-KWIH 452

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHS 604
           S + + GI  +    +  VD+    G ++ A    +    +  + +W  + +  A   H 
Sbjct: 453 SYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS-MWNAMISGFAMHGHG 511

Query: 605 DLKMAEFISKQILELDPDD 623
           +  +  F   + L + P+D
Sbjct: 512 EAALELFEEMEALGVTPND 530


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/640 (32%), Positives = 336/640 (52%), Gaps = 33/640 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     L   R  H  + KT    D FV  SLVN+Y +C   +    +   MP 
Sbjct: 80  VPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPD 139

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   L+ G+  N+    A   F+++  +   P+HYT   ML+ C +   ID G+Q+
Sbjct: 140 KNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQV 199

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  ++K    + T++ N+L  +Y K G +E     F+G   +NVI+WT +I+   +  +Y
Sbjct: 200 HGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENY 259

Query: 301 -EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            +  L L   M E G+ PNE+T T  ++ C +  +  +G    A   K G      V  +
Sbjct: 260 LDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNS 319

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTEEAIEA 408
            + +Y   GE  EA +  +EM  S+S ++WNA I+G+ +             +  +A++ 
Sbjct: 320 TMYLYLRKGETDEAMRLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKL 378

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  +VR++   D FT+SSIL  CS + +L   EQIH+  +K+   S+V V S+L+  YNK
Sbjct: 379 FRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNK 438

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CGS E A + F ++     V+W SMI  YSQ+GR++ AI LFE MV+ G RP   TF+++
Sbjct: 439 CGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSL 498

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACS++GLV++ ++ F+ M  EY I P   HY CMVD+  R G+L+ A  FI     +P
Sbjct: 499 LSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP 558

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L A CR H ++++A + + ++LEL P     YV L NMY   G   D    RK
Sbjct: 559 NEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRK 618

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE 708
           L K +++      SWI + +K+Y F + + +H +  ++Y+ L+ L+++ + +G+   +  
Sbjct: 619 LAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNA 678

Query: 709 DRVLY--------------------HSERLAVGFGLISLP 728
             +L+                    HSERLAV  GL+  P
Sbjct: 679 PELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETP 718



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/482 (23%), Positives = 224/482 (46%), Gaps = 25/482 (5%)

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
           DG  VQ   Y    +L  C     +   + LH   +K    +   V+ +L+ +Y++C   
Sbjct: 70  DGQTVQSAMYV--PLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASS 127

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            DA  +F+G+  +NV++WTA+I G   + +    L +   M E G  P+ YT    L++C
Sbjct: 128 RDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSAC 187

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           ++ R   +G   H   IK G      +G ++  +Y   G++    +  K      + ++W
Sbjct: 188 SAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGT-PDKNVITW 246

Query: 390 NAQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
              I+    ++   +  +  F  M+      +EFT +S++  C     ++  +Q+ +   
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCY 306

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ--------- 499
           K   E+N+ V +S +  Y + G  ++A R+F ++ ++ +++WN+MI  Y+Q         
Sbjct: 307 KVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDL 366

Query: 500 NGRAR--KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           + R+R  +A+ LF  +V   ++P   TF ++LS CS    ++ G+++  + +K  G L +
Sbjct: 367 HARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKT-GCLSD 425

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQI 616
               S +V++  + G +E A      +P + T   W  + +    H   + A +     +
Sbjct: 426 VVVNSALVNMYNKCGSIECATKAFVEMPTR-TPVTWTSMISGYSQHGRSQDAIQLFEDMV 484

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIY 671
           L     +   +V+L +  + AGL  +AE    +M+  E   EP     GC  ++++ ++ 
Sbjct: 485 LSGARPNEITFVSLLSACSYAGLVEEAERYFDMMR-NEYHIEPLVDHYGC-MVDMFVRLG 542

Query: 672 RF 673
           R 
Sbjct: 543 RL 544



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 2/189 (1%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+R+        Y  +L  C     L     +H  +VK+   +++ V +SL+  Y +C S
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             DA R+F  +   +VV+W ++I  ++ N     A+ +F +M+  G  P++ T   +LSA
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS +  +  GQ+V    +K YG     +  + +  L  ++G LE  L      P K    
Sbjct: 187 CSAARRIDLGQQVHGYSIK-YGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDK-NVI 244

Query: 592 IWRPLFAAC 600
            W  + ++C
Sbjct: 245 TWTTMISSC 253


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/618 (33%), Positives = 348/618 (56%), Gaps = 27/618 (4%)

Query: 141 ALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
             + KT   G D  V  +L++M+A+ GD+ +   V   +          L+  Y +    
Sbjct: 168 GFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCA 227

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            +    FL +     +P+ Y+ S+M++ C  L ++  G+QLH+  ++L  +S + VS  L
Sbjct: 228 SKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGL 287

Query: 260 LTMYIKCGM---MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---D 313
           + MY K  M   ME A  VF+ + + NV+SWTA+I+G+ Q G  E    ++ L RE   +
Sbjct: 288 VDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQEN--NVMALFREMLNE 345

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            I PN  T++  L +CA+L +   G   HA V+K  +A  + VG A+V MY+  G + EA
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +K   ++ ++ + +S +  +     N      IE        D     FT++S+L A + 
Sbjct: 406 RKAFDQLYET-NILSMSPDVETERNNASCSSKIEGM------DDGVSTFTFASLLSAAAS 458

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +  L   +++H+  +K+ F S+  + +SL+  Y +CG  EDA R F ++   +V+SW S+
Sbjct: 459 VGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSI 518

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I   +++G A++A+ +F  M++ G++P + T++AVLSACSH GLV++G++ F SM K++G
Sbjct: 519 ISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHG 578

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           +LP   HY+C+VDLL R+G +E A  FI+ +P K  A +W+ L +ACR + + ++ E  +
Sbjct: 579 LLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAA 638

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
             ++ L+P D A YV LSN+YA+AGL  +    R LM+ K +SKE G SW++V N I+ F
Sbjct: 639 NHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEF 698

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGF 722
            + + SH     +Y KL  L+++I+DIG+           ++  KE  +L HSE++AV F
Sbjct: 699 RAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAF 758

Query: 723 GLISLPAKNKFECSRTLE 740
           GLI+  A       + L 
Sbjct: 759 GLITTSATKPMRIFKNLR 776



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 251/542 (46%), Gaps = 24/542 (4%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQM-P 179
           ++L+  +R   L LGR  H  + ++ +   D  V  SL+ MY+KCG +++   V  QM  
Sbjct: 45  KLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCG 104

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--GSLSAIDEG 237
             D+ S   + +  A+N    ++     ++  + ++PN +T       C    L  +  G
Sbjct: 105 VRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGG 164

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
             L        + +  +V  AL+ M+ + G +  A+ VF+GL++R  + WT +I  + Q 
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   K + L   M +DG +P+ Y+ +  +++C  L +  +G   H+  ++ G+     V 
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284

Query: 358 TAIVDMYSGLG---EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA-FSQMV 413
             +VDMY+ L     +  A+K  K M +  + +SW A I+G+ ++   E  + A F +M+
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRH-NVMSWTALISGYVQSGVQENNVMALFREML 343

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 +  TYS++LKAC+ L    +  QIH+ ++K+       VG++L+  Y + G  E
Sbjct: 344 NESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCME 403

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL--AVLSA 531
           +A + F QL   +++S +  ++    N      I        EG+    STF   ++LSA
Sbjct: 404 EARKAFDQLYETNILSMSPDVETERNNASCSSKI--------EGMDDGVSTFTFASLLSA 455

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            +  GL+  GQK   ++  + G   ++   + +V +  R G LE A      +       
Sbjct: 456 AASVGLLTKGQK-LHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVIS 514

Query: 592 IWRPLFAACRCHSDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
            W  + +    H   K A   F    +  + P+D   Y+ + +  +  GL  + +E  + 
Sbjct: 515 -WTSIISGLAKHGYAKQALSMFHDMILAGVKPND-VTYIAVLSACSHVGLVKEGKEHFRS 572

Query: 650 MK 651
           M+
Sbjct: 573 MQ 574



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 215/465 (46%), Gaps = 29/465 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGC-SNTVPV 106
            C L +   +   L  +  +F+G   IE   +      TR       ++  GC S  V +
Sbjct: 183 GCALIDMFARNGDLVAAQRVFDGL--IERTSVVWTLLITR-------YVQAGCASKVVEL 233

Query: 107 TCYSLESLL--DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
             + L+     D   +  ++S C+    + LG++ H++  +  +  D  V+  LV+MYAK
Sbjct: 234 FLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAK 293

Query: 165 CGDIKSM---VAVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFFLKLDGIDVQPNHYT 220
               +SM     V K MP  ++ S   L++GY ++ +  +   + F ++    ++PNH T
Sbjct: 294 LKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHIT 353

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS +L  C +LS  D G+Q+HA  +K        V NAL++MY + G ME+A   F+ L 
Sbjct: 354 YSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLY 413

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA--LASCASLRNSHMG 338
           + N++S +  +   + +          C  + +G+D    TFT A  L++ AS+     G
Sbjct: 414 ETNILSMSPDVETERNNAS--------CSSKIEGMDDGVSTFTFASLLSAAASVGLLTKG 465

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              HA  +K G      +  ++V MY+  G + +A +   EM K  + +SW + I+G  +
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM-KDHNVISWTSIISGLAK 524

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC-EQIHSRIVKSKFESNVH 457
           +   ++A+  F  M+      ++ TY ++L ACS +  +    E   S          + 
Sbjct: 525 HGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRME 584

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNG 501
             + +++   + G  E+A +  +++   AD + W +++ A    G
Sbjct: 585 HYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYG 629



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 19/209 (9%)

Query: 96  IDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVT 155
           +DDG      V+ ++  SLL     + +L+          G++ HAL  K     DQ ++
Sbjct: 440 MDDG------VSTFTFASLLSAAASVGLLTK---------GQKLHALSMKAGFRSDQGIS 484

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
            SLV+MYA+CG ++       +M   ++ S   +++G AK+    QA S F  +    V+
Sbjct: 485 NSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVK 544

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--LSKTAVSNALLTMYIKCGMMEDAE 273
           PN  TY  +L+ C  +  + EGK+ H ++M+  +  L +      ++ +  + G++E+A 
Sbjct: 545 PNDVTYIAVLSACSHVGLVKEGKE-HFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEAR 603

Query: 274 S-VFEGLVQRNVISWTAIINGFKQHGDYE 301
             + E   + + + W  +++  + +G+ E
Sbjct: 604 QFINEMPCKADALVWKTLLSACRTYGNTE 632



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 7/189 (3%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCG 470
           ++ +D +CD    + +L + +    L     +H R+++S+  +++  V +SL+  Y+KCG
Sbjct: 34  VLSSDHSCDA---AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCG 90

Query: 471 SWEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           + E A RVF Q+    D+VSW +M    ++NG  R+++ L  +M+  G+RP   T  A  
Sbjct: 91  AVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAA 150

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKP 588
            AC    L +    V    V + G    +    C ++D+  R G L  A      L I+ 
Sbjct: 151 RACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL-IER 209

Query: 589 TAPIWRPLF 597
           T+ +W  L 
Sbjct: 210 TSVVWTLLI 218


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/605 (34%), Positives = 341/605 (56%), Gaps = 26/605 (4%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  V ++L++M A+ GD+ S   V   +    +     L++ Y +    ++A   FL   
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-- 268
               +P+ YT S+M++ C  L ++  G QLH+  +++ + S   VS  L+ MY K  +  
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306

Query: 269 -MEDAESVFEGLVQRNVISWTAIINGFKQHGDYE-KPLRLVCLMREDGIDPNEYTFTVAL 326
            M+ A  VFE + + +VISWTA+I+G+ Q G  E K + L   M  + I PN  T++  L
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            +CA++ +   G   HA VIK   A    VG A+V MY+  G + EA++   ++ +  S 
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER-SM 425

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           +S   +     R+   +  I       R D      T++S++ A + +  L   +Q+H+ 
Sbjct: 426 ISCITE----GRDAPLDHRIG------RMDMGISSSTFASLISAAASVGMLTKGQQLHAM 475

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +K+ F S+  V +SL+  Y++CG  EDA R F++L   +V+SW SMI   +++G A +A
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF  M++ G++P + T++AVLSACSH GLV++G++ F SM +++G++P   HY+CMVD
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LL R+G ++ AL FI+ +P+K  A +W+ L  ACR H ++++ E  +K ++EL+P D A 
Sbjct: 596 LLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP 655

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           YV LSN+YA+AGL  +    R  M+   ++KE G SW+EV N  + F + + SH     +
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDI 715

Query: 687 YEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGLISLPAKNKFEC 735
           Y KL  L+ +I+ +G+           +D  KE  +L HSE++AV FGLI+  A      
Sbjct: 716 YGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRI 775

Query: 736 SRTLE 740
            + L 
Sbjct: 776 FKNLR 780



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 176/326 (53%), Gaps = 17/326 (5%)

Query: 237 GKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGF 294
           G+ LH + ++   L + AV +N+LLT+Y +CG +  A +VF+G+   R+++SWTA+ +  
Sbjct: 67  GRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCL 126

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI-----KRG 349
            ++G   + L L+  M E G+ PN YT      +C      H  Y     V+     K G
Sbjct: 127 ARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACF----PHELYCLVGGVVLGLVHKMG 182

Query: 350 MALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           +   D  VG+A++DM +  G++  A+K    + +  + V W   I+ + + +  EEA+E 
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEK-TVVVWTLLISRYVQGECAEEAVEI 241

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F   + +    D +T SS++ AC+ L S+    Q+HS  ++  F S+  V   L++ Y K
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK 301

Query: 469 CG---SWEDAERVFSQLTAADVVSWNSMIKAYSQNG-RARKAIILFEKMVVEGIRPTNST 524
                + + A +VF ++   DV+SW ++I  Y Q+G +  K ++LF +M+ E I+P + T
Sbjct: 302 SNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHIT 361

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVK 550
           + ++L AC++      G++V   ++K
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIK 387



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 15/321 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM---V 172
           D+  +  ++S C+    + LG + H+L  +     D  V+  LV+MYAK    ++M    
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYAN 312

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            V ++M   D+ S   L++GY ++ +  ++    F ++    ++PNH TYS++L  C ++
Sbjct: 313 KVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANI 372

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S  D G+Q+HA  +K    +   V NAL++MY + G ME+A  VF  L +R++IS   I 
Sbjct: 373 SDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--CIT 430

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G       + PL       + GI  +  TF   +++ AS+     G   HA  +K G  
Sbjct: 431 EG------RDAPLDHRIGRMDMGISSS--TFASLISAAASVGMLTKGQQLHAMTLKAGFG 482

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FV  ++V MYS  G + +A +   E+ K  + +SW + I+G  ++   E A+  F  
Sbjct: 483 SDRFVSNSLVSMYSRCGYLEDACRSFNEL-KDRNVISWTSMISGLAKHGYAERALSLFHD 541

Query: 412 MVRNDAACDEFTYSSILKACS 432
           M+      ++ TY ++L ACS
Sbjct: 542 MILTGVKPNDVTYIAVLSACS 562



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 91/172 (52%), Gaps = 4/172 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G++ HA+  K     D+FV+ SLV+MY++CG ++       ++   ++ S   +++G
Sbjct: 466 LTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--L 250
            AK+   ++A S F  +    V+PN  TY  +L+ C  +  + EGK+ + ++M+  +  +
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDHGLI 584

Query: 251 SKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +      ++ +  + G++++A E + E  ++ + + W  ++   + H + E
Sbjct: 585 PRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIE 636



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 4/159 (2%)

Query: 443 IHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQN 500
           +H R+++    + +  V +SL+  Y++CG+   A  VF  +    D+VSW +M    ++N
Sbjct: 70  LHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARN 129

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-A 559
           G  R++++L  +M+  G+ P   T  AV  AC    L      V   +V + G+   + A
Sbjct: 130 GAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIA 189

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             S ++D+L R G L  A      L I+ T  +W  L +
Sbjct: 190 VGSALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLIS 227


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/615 (33%), Positives = 334/615 (54%), Gaps = 44/615 (7%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF-SFFLKLDGIDVQ 215
           +L++ Y+K   +  M  V   MP  D+ S N L++ YA      Q+  ++ L L      
Sbjct: 80  TLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFN 139

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------------ 263
            N    STML +      +  G Q+H   +K  + S   V + L+ MY            
Sbjct: 140 LNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQA 199

Query: 264 -------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
                              ++C  +ED+  +F  + +++ ISWTA+I GF Q+G   + +
Sbjct: 200 FDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAI 259

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
            L   MR + ++ ++YTF   L +C  +     G   HA +I+       FVG+A+VDMY
Sbjct: 260 DLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMY 319

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
                I  A+   ++M    + VSW A + G+ +N  +EEA++ F  M  N    D+FT 
Sbjct: 320 CKCKSIKSAETVFRKM-NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
            S++ +C+ L SL    Q H R + S   S + V ++L+  Y KCGS ED+ R+FS+++ 
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSY 438

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            D VSW +++  Y+Q G+A + + LFE M+  G +P   TF+ VLSACS +GLVQ G ++
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           FESM+KE+ I+P E HY+CM+DL  RAG+LE A  FI+ +P  P A  W  L ++CR H 
Sbjct: 499 FESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHR 558

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
           ++++ ++ ++ +L+L+P + A Y+ LS++YA  G   +    RK M+ K + KEPGCSWI
Sbjct: 559 NMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWI 618

Query: 665 EVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLY 713
           +  N+++ F + ++S+    ++Y +L++L  ++   G+            D+EK   + +
Sbjct: 619 KYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNH 678

Query: 714 HSERLAVGFGLISLP 728
           HSE+LA+ FGLI +P
Sbjct: 679 HSEKLAIAFGLIFIP 693



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 206/418 (49%), Gaps = 40/418 (9%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++  +  +L   S++ C+ LG + H  + K       FV + LV+MY+K G +      
Sbjct: 140 LNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQA 199

Query: 175 VKQMPYLDIASCNCL-------------------------------LAGYAKNALFDQAF 203
             +MP  ++   N L                               +AG+ +N L  +A 
Sbjct: 200 FDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAI 259

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             F ++   +++ + YT+ ++L  CG + A+ EGKQ+HA  ++  Y     V +AL+ MY
Sbjct: 260 DLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMY 319

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KC  ++ AE+VF  +  +NV+SWTA++ G+ Q+G  E+ +++ C M+ +GI+P+++T  
Sbjct: 320 CKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLG 379

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             ++SCA+L +   G  FH + +  G+     V  A+V +Y   G I ++ +   EM   
Sbjct: 380 SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMS-Y 438

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              VSW A ++G+ +  K  E +  F  M+ +    D+ T+  +L ACS    +    QI
Sbjct: 439 VDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQI 498

Query: 444 HSRIVKSK----FESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKA 496
              ++K       E +    + +I+ +++ G  E+A +  +++  + D + W S++ +
Sbjct: 499 FESMIKEHRIIPIEDHY---TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSS 553



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 176/350 (50%), Gaps = 32/350 (9%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG-I 315
           N LL+ Y K   + + E VF  +  R+++SW ++I+ +   G   + ++   LM  +G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N    +  L   +     H+G   H  V+K G     FVG+ +VDMYS  G ++ A++
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198

Query: 376 QLKEMG------------------------------KSASSVSWNAQIAGFFRNQKTEEA 405
              EM                               +   S+SW A IAGF +N    EA
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           I+ F +M   +   D++T+ S+L AC  + +L   +Q+H+ I+++ ++ N+ VGS+L++ 
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KC S + AE VF ++   +VVSW +M+  Y QNG + +A+ +F  M   GI P + T 
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
            +V+S+C++   +++G + F       G++      + +V L G+ G +E
Sbjct: 379 GSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALVTLYGKCGSIE 427



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 162/296 (54%), Gaps = 6/296 (2%)

Query: 111 LESL-LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE+L +D+     VL+ C     L+ G++ HA I +T    + FV ++LV+MY KC  IK
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK 326

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           S   V ++M   ++ S   +L GY +N   ++A   F  +    ++P+ +T  ++++ C 
Sbjct: 327 SAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCA 386

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           +L++++EG Q H + +    +S   VSNAL+T+Y KCG +ED+  +F  +   + +SWTA
Sbjct: 387 NLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTA 446

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-- 347
           +++G+ Q G   + LRL   M   G  P++ TF   L++C+       G      +IK  
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEH 506

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG--FFRNQK 401
           R + + D   T ++D++S  G + EA+K + +M  S  ++ W + ++   F RN +
Sbjct: 507 RIIPIEDHY-TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNME 561



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 10/213 (4%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+     + N++  ++L+ +Y+K     + ERVF  +   D+VSWNS+I AY+  G   +
Sbjct: 65  RVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQ 124

Query: 506 AIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           ++  +  M+  G    N   L+ +L   S  G V  G +V   +VK +G        S +
Sbjct: 125 SVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVK-FGFQSYVFVGSPL 183

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC-RCHSDLKMAEFISKQIL-ELDPD 622
           VD+  + G +  A      +P K    ++  L A   RC    ++ +  S+Q+  ++   
Sbjct: 184 VDMYSKTGLVFCARQAFDEMPEKNVV-MYNTLIAGLMRCS---RIED--SRQLFYDMQEK 237

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           D+  +  +   + + GL  +A +  + M+++ +
Sbjct: 238 DSISWTAMIAGFTQNGLDREAIDLFREMRLENL 270



 Score = 45.8 bits (107), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 4/148 (2%)

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C LL      ++IH  I+K+     + + ++L+ AY K      A RVF Q+   ++ SW
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N+++ +YS+     +   +F  M    +   NS    ++SA +  G +    K +  M+ 
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNS----LISAYAGRGFLLQSVKAYNLMLY 134

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
                      S M+ L  + G + + L
Sbjct: 135 NGPFNLNRIALSTMLILASKQGCVHLGL 162


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/586 (34%), Positives = 337/586 (57%), Gaps = 14/586 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L++ Y KCG +     V  ++P+  I + N ++A Y +N    +A   + ++    + P+
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 175

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVF 276
            +T+S++      L  + EG++ H Q++ L   +S   V +AL+ MY K G M DA  V 
Sbjct: 176 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 235

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +V ++V+ +TA+I G+  HG+  + L++   M + GI+ NEYT +  L  C +L +  
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G + H  ++K G+       T+++ MY   G + ++ K  K+   + + V+W + I G 
Sbjct: 296 SGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQF-INPNQVTWTSVIVGL 354

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N + E A+  F QM+R+    + FT SS+L+ACS L  L   +QIH+ ++K   + + 
Sbjct: 355 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK 414

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           +VG++LI+ Y KCGS E A  VF+ L   DVVS NSMI +Y+QNG   +A+ LF  M   
Sbjct: 415 YVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 474

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+ P N T+L VLSAC+++GL+++G  +F S      I   + HY+CMVDLLGRAG+L+ 
Sbjct: 475 GLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKE 534

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A + I+ + I     IWR L +ACR H D++MA+ +  ++++L P+D   +V LSN+YA 
Sbjct: 535 AEMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYAS 593

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
            G  +   E +  M+   + K P  SW++V  +I+ F + + SH     + EKL++L+++
Sbjct: 594 TGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEK 653

Query: 697 IEDIGHT----------DNEKEDRVL-YHSERLAVGFGLISLPAKN 731
           ++++G+           D EK+ R L YHSE+LAV F L     KN
Sbjct: 654 VKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKN 699



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 198/359 (55%), Gaps = 7/359 (1%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS+++  C  + +I +  ++ +  +K  +    ++ N L+  Y+KCG +  A  VF+ + 
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVP 137

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R++++W ++I  + ++G  ++ + +   M  DGI P+E+TF+    + + L   H G  
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197

Query: 341 FHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFFR 398
            H Q +  G+ + + FVG+A+VDMY+  G++ +A+    + +GK    V + A I G+  
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDV--VLFTALIVGYSH 255

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           + +  E+++ F  M +     +E+T SS+L  C  L  L +   IH  IVK+  ES V  
Sbjct: 256 HGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVAS 315

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SL+  Y +CG  +D+ +VF Q    + V+W S+I    QNGR   A++ F +M+   I
Sbjct: 316 QTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 375

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            P + T  +VL ACS   +++ G+++  ++V ++G+  ++   + ++D  G+ G  EIA
Sbjct: 376 TPNSFTLSSVLRACSSLAMLEQGKQI-HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 433



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 213/472 (45%), Gaps = 31/472 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F++ P R  ++ + +I +   N    G S+          PDG + D  + +    
Sbjct: 129 ARKVFDEVPHRHIVAWNSMIASYIRN----GRSKEAIDIYQRMVPDGILPDEFTFSSVFK 184

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG----DQFVTASLVNMYA 163
            +S   L+ +                  G+R H    ++ V G    + FV ++LV+MYA
Sbjct: 185 AFSDLGLVHE------------------GQRAHG---QSVVLGVGVSNVFVGSALVDMYA 223

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G ++    V  Q+   D+     L+ GY+ +    ++   F  +    ++ N YT S+
Sbjct: 224 KFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSS 283

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+L  +  G+ +H   +K    S  A   +LLTMY +CG+++D+  VF+  +  N
Sbjct: 284 VLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPN 343

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            ++WT++I G  Q+G  E  L     M    I PN +T +  L +C+SL     G   HA
Sbjct: 344 QVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHA 403

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            V+K G+ +  +VG A++D Y   G    A+     +      VS N+ I  + +N    
Sbjct: 404 IVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIYSYAQNGFGH 462

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSL 462
           EA++ FS M       +  T+  +L AC+    L   C    S       E      + +
Sbjct: 463 EALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACM 522

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++   + G  ++AE + +Q+  +DVV W +++ A   +G    A  +  +++
Sbjct: 523 VDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 574


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/632 (32%), Positives = 348/632 (55%), Gaps = 18/632 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-Y 180
           VL  C+  E LE G+  H+ I+ T  +  D  +  SL+ MYAKCG ++    + ++M   
Sbjct: 127 VLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR 186

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             ++S N ++A YA++  F++A   +   + +DV+P+  T++++L+ C +L  +D+G+++
Sbjct: 187 RSVSSWNAMIAAYAQSGHFEEAIRLY---EDMDVEPSVRTFTSVLSACSNLGLLDQGRKI 243

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA           ++ NALLTMY +C  ++DA  +F+ L +R+V+SW+A+I  F +   +
Sbjct: 244 HALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLF 303

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ +     M+ +G+ PN YTF   L +CAS+ +   G   H Q++  G  +    GTA+
Sbjct: 304 DEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTAL 363

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-DAAC 419
           VD+Y+  G + EA+    ++      + W   I G+ +       +E + +M        
Sbjct: 364 VDLYTSYGSLDEARSLFDQIENRDEGL-WTVLIGGYSKQGHRTGVLELYREMKNTTKVPA 422

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            +  YS ++ AC+ L + A   Q HS I      S+  + +SL+  Y++ G+ E A +VF
Sbjct: 423 TKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVF 482

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++++ D ++W ++I  Y+++G    A+ L+++M +EG  P+  TF+ VL ACSH+GL +
Sbjct: 483 DKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQE 542

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+++F S+  +Y + P  AHYSC++DLL RAG+L  A   I+ +P++P    W  L  A
Sbjct: 543 QGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGA 602

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
            R H D+K A   + QI +LDP D A YV LSN++A  G  A     R  M  + + K  
Sbjct: 603 SRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRR 662

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG---------HTDNEKEDR 710
           G SWIEV ++I+ F   + SH    +++ +L++L  +I++ G         H   EKE  
Sbjct: 663 GSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKE 722

Query: 711 VL--YHSERLAVGFGLISLPAKNKFECSRTLE 740
           +L   HSE+LA+ FGLI+           TL 
Sbjct: 723 LLLRLHSEKLAIAFGLIATAPGTTLRIFNTLR 754



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 259/518 (50%), Gaps = 16/518 (3%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE  R+ H  I+  A   + F+   +V  Y KCG + S       +   +  S   +L  
Sbjct: 40  LESVRQIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTA 98

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+N  +  A   + ++D   +QPN   Y+T+L  C S+ A++EGK +H++    + L  
Sbjct: 99  YAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKL 155

Query: 253 TAV-SNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
             +  N+LLTMY KCG +EDA+ +FE +  +R+V SW A+I  + Q G +E+ +RL   M
Sbjct: 156 DVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM 215

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
               ++P+  TFT  L++C++L     G   HA +  RG  L   +  A++ MY+    +
Sbjct: 216 ---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCL 272

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            +A K  + + +    VSW+A IA F      +EAIE +S+M       + +T++S+L A
Sbjct: 273 DDAAKIFQRLPRR-DVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLA 331

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+ +  L     +H +I+ + ++  +  G++L++ Y   GS ++A  +F Q+   D   W
Sbjct: 332 CASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLW 391

Query: 491 NSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
             +I  YS+ G     + L+ +M     +  T   +  V+SAC+  G   D ++   S +
Sbjct: 392 TVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQA-HSDI 450

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           +  G++ +    + +V++  R G LE A      +  + T   W  L A    H +  +A
Sbjct: 451 EADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA-WTTLIAGYAKHGEHGLA 509

Query: 610 EFISKQILELDPDDAAVYVTLSNMYA--EAGLQADAEE 645
             + K+ +EL+  + +    +  +YA   AGLQ   ++
Sbjct: 510 LGLYKE-MELEGAEPSELTFMVVLYACSHAGLQEQGKQ 546



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 7/176 (3%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y   L+ C  L S+    QIH RI  +   +NV +G+ ++ AY KCGS   A   F  + 
Sbjct: 30  YRDALRQCQDLESV---RQIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARVAFDAIA 85

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +  SW SM+ AY+QNG  R A+ L+++M    ++P    +  VL AC+    +++G+ 
Sbjct: 86  RKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKA 142

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +   +    G+  +    + ++ +  + G LE A      +  + +   W  + AA
Sbjct: 143 IHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAA 198


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/578 (35%), Positives = 321/578 (55%), Gaps = 2/578 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     + LG+  H  + K  +  D  V +SLV MYAKC + +  V +  +MP  D
Sbjct: 112 VLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKD 171

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +A  N +++ Y ++  F++A  +F  +     +P+  T +T ++ C  L  +D G+++H 
Sbjct: 172 VACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHK 231

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +   +   + VS AL+ MY KCG +E A  VFE +  + V++W ++ING+   GD   
Sbjct: 232 ELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGIS 291

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M  +G+ P   T T  L +C+       G   H  +I+  +    F+ ++++D
Sbjct: 292 CIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMD 351

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G++  A+   K M K+ ++VSWN  I+G+    K  +A+  F +M ++    D  
Sbjct: 352 LYFKCGKVESAETIFKLMPKT-TTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAI 410

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S+L ACS L +L    +IH+ IV+    +N  V  +L++ Y KCG+ E+A  VF  L
Sbjct: 411 TFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCL 470

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+VSW SMI AY  +GR  +A+ LF +M+   ++P   TFLA+LSACSH+GLV DG 
Sbjct: 471 PERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGL 530

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAACR 601
             F  M+  YGI+P   HYSC++ LLGRAG+L  A  I  SN  I     +   LF+ACR
Sbjct: 531 YHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACR 590

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L +   I++ +++ DPDD++ Y+ LSNMYA  G   +    R  MK   + K PGC
Sbjct: 591 LHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGC 650

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIE+  KI  FF ++ SH  +  +   L  L   +ED
Sbjct: 651 SWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMED 688



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 263/534 (49%), Gaps = 10/534 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG--DIKSMV 172
           +D + +I +L      + L+ G+  H  +    +  D +V  +L+++Y  C   D    V
Sbjct: 1   MDARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNV 60

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSL 231
             V + P+ +I+ CN L+AGY +N ++D+A   F KL     ++P+ YTY ++L  CG L
Sbjct: 61  FDVIENPF-EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGL 119

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             +  G+ +H   +K   +    V ++L+ MY KC   E A  +F+ +  ++V  W  +I
Sbjct: 120 RRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVI 179

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + + Q G +E+ LR   +MR  G +P+  T T A++SCA L +   G   H +++  G  
Sbjct: 180 SCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFR 239

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           +  FV  A+VDMY   G++  A +  ++M  + + V+WN+ I G+         I+ F +
Sbjct: 240 MDSFVSAALVDMYGKCGQLEMAIEVFEQM-PNKTVVAWNSMINGYGFKGDGISCIQLFKR 298

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M          T +S L ACS    L   + +H  I++++ + ++ + SSL++ Y KCG 
Sbjct: 299 MYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGK 358

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            E AE +F  +     VSWN MI  Y   G+   A+ LF +M    + P   TF +VL+A
Sbjct: 359 VESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAA 418

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS    ++ G+++  +++ E  +   E     ++D+  + G +E A      LP +    
Sbjct: 419 CSQLAALEKGREI-HNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVS 477

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADA 643
            W  +  A   H  +  A  +  ++L+  + PD       LS   + AGL  D 
Sbjct: 478 -WTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSAC-SHAGLVDDG 529



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 178/361 (49%), Gaps = 21/361 (5%)

Query: 89  DSFPDGFIDDGCSNTVPVTCY----SLESLL-------------DKQFVIEVLSYCSREE 131
           D  PD   D  C NTV ++CY      E  L             D   +   +S C+R  
Sbjct: 165 DEMPDK--DVACWNTV-ISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
            L+ GR  H  +  +    D FV+A+LV+MY KCG ++  + V +QMP   + + N ++ 
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           GY            F ++    V+P   T ++ L  C   + + EGK +H   ++ +   
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              ++++L+ +Y KCG +E AE++F+ + +   +SW  +I+G+   G     LRL   M 
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMS 401

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           +  ++P+  TFT  LA+C+ L     G   H  +++R +   + V  A++DMY+  G + 
Sbjct: 402 KSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVE 461

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           EA    K + +    VSW + I  +  + +  EA+E F++M++++   D  T+ +IL AC
Sbjct: 462 EAFGVFKCLPER-DLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSAC 520

Query: 432 S 432
           S
Sbjct: 521 S 521


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/670 (31%), Positives = 351/670 (52%), Gaps = 64/670 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C    C EL  +   L  K    GD  V  +LV+M+ +CG +     +  Q+    
Sbjct: 144 VMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPT 203

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV---------------------------- 214
           I   N +LAGYAK    D A  +F  +   DV                            
Sbjct: 204 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 263

Query: 215 ---QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
              + +  TY++ L  C  L ++  GKQLHA+ ++        V++AL+ +Y KCG  ++
Sbjct: 264 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 323

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A+ VF  L  RN +SWT +I G  Q+  + K + L   MR + +  +++     ++ C +
Sbjct: 324 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 383

Query: 332 LRNSHMGYMFHAQVIKRG------------------------------MALGDFVG-TAI 360
             +  +G   H+  +K G                              M+  D V  T++
Sbjct: 384 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 443

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAAC 419
           +  YS +G I +A++    M  + ++++WNA +  + ++   E+ ++ +S M+ + D   
Sbjct: 444 ITAYSQIGNIIKAREFFDGMA-TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTP 502

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  TY ++ + C+ + +    +QI    VK+    NV V ++ I  Y+KCG   +A+++F
Sbjct: 503 DWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLF 562

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             L   DVVSWN+MI  YSQ+G  ++A   F+ M+ +G +P   +++AVLS CSHSGLVQ
Sbjct: 563 DLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+  F+ M + +GI P   H+SCMVDLLGRAG L  A   I  +P+KPTA +W  L +A
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H + ++AE  +K + ELD  D+  Y+ L+ +Y++AG   D+ + RKLM+ K I K P
Sbjct: 683 CKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNP 742

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLA 719
           G SW+EV NK++ F + + SH ++  +  K+ +LM++I  +G+   E     ++HSE+LA
Sbjct: 743 GYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEIHHSEKLA 802

Query: 720 VGFGLISLPA 729
           V FG++SLPA
Sbjct: 803 VAFGIMSLPA 812



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 207/436 (47%), Gaps = 37/436 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N YAK G +     +  +MP  D+AS N L++GY +   F      F+ +    D  P
Sbjct: 77  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV- 275
           N +T+  ++  CG+L   +   QL     K  +     V  AL+ M+++CG ++ A  + 
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196

Query: 276 ------------------------------FEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                         FE + +R+V+SW  +I    Q G   + L 
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           LV  M   G+  +  T+T +L +CA L +   G   HA+VI+    +  +V +A++++Y+
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 316

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EAK+    + +  +SVSW   I G  + +   +++E F+QM     A D+F  +
Sbjct: 317 KCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALA 375

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++  C     L    Q+HS  +KS     + V +SLI  Y KCG  ++AE VFS ++  
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSER 435

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW SMI AYSQ G   KA   F+ M          T+ A+L A    G  +DG K++
Sbjct: 436 DIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMY 491

Query: 546 ESMVKEYGILPEEAHY 561
            +M+ +  + P+   Y
Sbjct: 492 SAMLSQKDVTPDWVTY 507



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 211/498 (42%), Gaps = 82/498 (16%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD       L+ C+R   L  G++ HA + ++    D +V ++L+ +YAKCG  K    V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +   +  S   L+ G  +   F ++   F ++    +  + +  +T+++ C +   +
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV------------------- 275
             G+QLH+  +K  +     VSN+L+++Y KCG +++AE V                   
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447

Query: 276 ------------FEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYTF 322
                       F+G+  RN I+W A++  + QHG  E  L++   ++ +  + P+  T+
Sbjct: 448 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 507

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
                 CA +  + +G       +K G+ L   V  A + MYS  G I EA+K L ++  
Sbjct: 508 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK-LFDLLN 566

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               VSWNA I G+ ++   ++A + F  M+   A  D  +Y ++L  CS          
Sbjct: 567 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS---------- 616

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-----WNSMIKAY 497
            HS +V                        ++ +  F  +T    +S     ++ M+   
Sbjct: 617 -HSGLV------------------------QEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL-- 555
            + G   +A  L +KM    ++PT   + A+LSAC     +    ++ E   K    L  
Sbjct: 652 GRAGHLTEAKDLIDKMP---MKPTAEVWGALLSACK----IHGNDELAELAAKHVFELDS 704

Query: 556 PEEAHYSCMVDLLGRAGK 573
           P+   Y  +  +   AGK
Sbjct: 705 PDSGSYMLLAKIYSDAGK 722



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 189/481 (39%), Gaps = 99/481 (20%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA--------------- 272
           CGS  A+   + LH + + +   S   + N LL  Y+ CG + DA               
Sbjct: 14  CGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVIT 73

Query: 273 -----------------ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
                            E +F+ + +R+V SW  +++G+ Q   +   L     M   G 
Sbjct: 74  HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGD 133

Query: 316 D-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             PN +TF   + SC +L    +         K        V TA+VDM+   G +  A 
Sbjct: 134 SLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFAS 193

Query: 375 KQLKEMGKSA------------------------------SSVSWNAQIAGFFRNQKTEE 404
           +   ++ +                                  VSWN  IA   ++ +  E
Sbjct: 194 RLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVRE 253

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+    +M R     D  TY+S L AC+ L SL   +Q+H+++++S  + + +V S+LIE
Sbjct: 254 ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIE 313

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y KCGS+++A+RVF+ L   + VSW  +I    Q     K++ LF +M  E +      
Sbjct: 314 LYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFA 373

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
              ++S C            F  M      L  + H  C+     RA       I +SN 
Sbjct: 374 LATLISGC------------FNRMDL---CLGRQLHSLCLKSGHNRA-------IVVSNS 411

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
            I         L+A C    DL+ AEF+   + E    D   + ++   Y++ G    A 
Sbjct: 412 LIS--------LYAKC---GDLQNAEFVFSSMSE---RDIVSWTSMITAYSQIGNIIKAR 457

Query: 645 E 645
           E
Sbjct: 458 E 458



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF-SQLTAAD 486
           L++C    +LA    +H R+V     S V + ++L+ AY  CG+  DA R+  + +   +
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V++ N M+  Y++ G    A  LF++M    +   N+    ++S    +    DG + F 
Sbjct: 71  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNT----LMSGYFQARRFLDGLETFV 126

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           SM +    LP    + C++   G  G  E+A
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/617 (33%), Positives = 344/617 (55%), Gaps = 14/617 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L  C     +++GR  HA+I K+    D +V+ +L+ MYA CG ++    V K M +
Sbjct: 255 VSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLF 314

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N LL+G  +N ++  A + F  +     +P+  +   M+A  G  + +  G ++
Sbjct: 315 KDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV 374

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  +K    S   + N+L+ MY KC  ++   S FE + ++++ISWT II G+ Q+  +
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH 434

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L L+  ++ + +D +       L +C+ L++  +    H  V+K G+A    +  AI
Sbjct: 435 LDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAI 493

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V++Y  L  + +  + + E   S   VSW + I     N    EA+E F+ ++  +   D
Sbjct: 494 VNVYGELALV-DYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPD 552

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T  S+L A + L SL   ++IH  +++  F     + +SL++ Y +CG+ E+A  +F+
Sbjct: 553 LITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFN 612

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D++ W SMI A   +G  + AI LF KM  E + P + TFLA+L ACSHSGLV +
Sbjct: 613 YVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVE 672

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ FE M  EY + P   HY+C+VDLL R+  LE A  F+ N+PI+P+A +W  L  AC
Sbjct: 673 GKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGAC 732

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R HS+  + E  +K++L+L+ +++  YV +SN +A  G   D EE R +MK  ++ K+PG
Sbjct: 733 RIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPG 792

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-----------HTDNEKED 709
           CSWIEV NKI+ F +++KSH +   +Y KL Q  + +++ G               E++ 
Sbjct: 793 CSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKT 852

Query: 710 RVLY-HSERLAVGFGLI 725
           ++LY HSERLA+G+GL+
Sbjct: 853 QMLYGHSERLALGYGLL 869



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 260/563 (46%), Gaps = 11/563 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ--MPY 180
           VL  C   +   LG   H +  K    G  FV  +L+ MYAKCGD+     +     M  
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +++ +       +A S F ++  + V+ N YT+ + L  C   + I  G+ +
Sbjct: 214 DDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGI 273

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  +K  + +   VSNAL+ MY  CG MEDAE VF+ ++ ++ +SW  +++G  Q+  Y
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY 333

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              +     M++ G  P++ +    +A+     N   G   HA  IK G+     +G ++
Sbjct: 334 SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSL 393

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY     +       + M +    +SW   IAG+ +N+   +A+    ++       D
Sbjct: 394 IDMYGKCCCVKYMGSAFEYMPEK-DLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVD 452

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                SIL ACS L S    ++IH  ++K    +++ + ++++  Y +    + A  VF 
Sbjct: 453 PMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFE 511

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            + + D+VSW SMI     NG A +A+ LF  ++   I P   T ++VL A +    ++ 
Sbjct: 512 SINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKK 571

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++   ++++ G   E    + +VD+  R G +E A   I N   +    +W  +  A 
Sbjct: 572 GKEIHGFLIRK-GFFLEGLIANSLVDMYARCGTMENAR-NIFNYVKQRDLILWTSMINAN 629

Query: 601 RCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
             H   K A +  SK   E    D   ++ L    + +GL  + ++  ++MK  E   EP
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMK-NEYKLEP 688

Query: 660 GCSWIEVYNKIYRFFSQNKSHSE 682
              W E Y  +    +++ S  E
Sbjct: 689 ---WPEHYACLVDLLARSNSLEE 708



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 203/420 (48%), Gaps = 4/420 (0%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMVAVV 175
           +Q   + L  C+  + L  G++ HA   KT    D  F+    V+MY KCG     V V 
Sbjct: 46  QQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVF 105

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M    I + N ++        + +A   + ++  + V  + +T+  +L  CG+     
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERR 165

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-GLVQR-NVISWTAIING 293
            G ++H   +K  Y     V NAL+ MY KCG +  A  +F+ GL+++ + +SW +II+ 
Sbjct: 166 LGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISA 225

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
               G+  + L L   M+E G++ N YTF  AL +C       +G   HA ++K      
Sbjct: 226 HVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTD 285

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            +V  A++ MY+  G++ +A++  K M      VSWN  ++G  +N    +AI  F  M 
Sbjct: 286 VYVSNALIAMYANCGQMEDAERVFKSM-LFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +    D+ +  +++ A     +L    ++H+  +K   +SN+H+G+SLI+ Y KC   +
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
                F  +   D++SW ++I  Y+QN     A+ L  K+ +E +        ++L ACS
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 195/412 (47%), Gaps = 8/412 (1%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ-YLSKTAVSNALLTMYIKCGMMEDAES 274
           P    YS  L +C S  A+ +G+QLHA  +K Q YL    +    + MY KCG   DA  
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+ + +R + +W A+I      G Y + + L   MR  G+  + +TF   L +C + + 
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQI 393
             +G   H   +K G     FV  A++ MY+  G++  A+      + +    VSWN+ I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +      ++ EA+  F +M       + +T+ S L+AC     +     IH+ I+KS   
Sbjct: 224 SAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF 283

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           ++V+V ++LI  Y  CG  EDAERVF  +   D VSWN+++    QN     AI  F+ M
Sbjct: 284 TDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
              G +P   + L +++A   S  +  G +V    +K +GI       + ++D+ G+   
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIK-HGIDSNMHIGNSLIDMYGKCCC 402

Query: 574 LEIALIFISNLPIKPTAPIWRPL---FAACRCHSD-LKMAEFISKQILELDP 621
           ++        +P K     W  +   +A   CH D L +   +  + +++DP
Sbjct: 403 VKYMGSAFEYMPEKDLIS-WTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP 453



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 166/340 (48%), Gaps = 7/340 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +++   R   L  G   HA   K  +  +  +  SL++MY KC  +K M +  
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAF 410

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSA 233
           + MP  D+ S   ++AGYA+N     A +   K  L+ +DV P      ++L  C  L +
Sbjct: 411 EYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDP--MMIGSILLACSGLKS 468

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
               K++H   +K   L+   + NA++ +Y +  +++ A  VFE +  ++++SWT++I  
Sbjct: 469 EKLIKEIHGYVLK-GGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITC 527

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
              +G   + L L   + E  I+P+  T    L + A+L +   G   H  +I++G  L 
Sbjct: 528 CVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLE 587

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +  ++VDMY+  G + E  + +    K    + W + I     +   ++AI+ FS+M 
Sbjct: 588 GLIANSLVDMYARCGTM-ENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
             +   D  T+ ++L ACS    +   +Q H  I+K++++
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYK 685


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/619 (33%), Positives = 333/619 (53%), Gaps = 44/619 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF-LKLDG 211
           F   +L++ Y+K G ++ M  V   MP  D+ S N LL+GYA N L  ++   + + L  
Sbjct: 72  FSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD 131

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V  N  T+STML +  +   +D G+Q+H Q  K  Y S   V + L+ MY K G + D
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND 191

Query: 272 AESVFEGLVQRNV-------------------------------ISWTAIINGFKQHGDY 300
           A  +FE + ++N+                               ISWT II G  Q+G +
Sbjct: 192 ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLF 251

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ +     M  +G   +++TF   L +C        G   HA +I+       FVG+A+
Sbjct: 252 KEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSAL 311

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY     +  A+   ++M +  + +SW A + G+ +N  +EEA+  F  M RN+   D
Sbjct: 312 LDMYCKCRNVKYAEAVFRKM-RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +FT  S++ +C+ L SL    Q H + + S     V V ++LI  Y KCGS E A ++F 
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D VSW +++  Y+Q G+A + I LFE M+  GI P   TF+ VLSACS +GLV+ 
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEK 490

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   FE MVKE+ I P   HY+CM+DLL RAG+LE A  FI+ +P  P A  W  L ++C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R + +L++ ++ ++ + +L+P + A Y+ LS++YA  G   D  + RK M+   + KEPG
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVL 712
            SWI+  NK++ F + ++S     ++Y KL+ L  ++ + G+         D EK +++ 
Sbjct: 611 HSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIK 670

Query: 713 ---YHSERLAVGFGLISLP 728
              +HSE+LA+ FGL+ +P
Sbjct: 671 MLNHHSEKLAIAFGLLFIP 689



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 200/417 (47%), Gaps = 37/417 (8%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
             P  + Y+ ++   G L  +   + +     +    S     N LL+ Y K G ++D +
Sbjct: 36  TNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFS----WNTLLSAYSKLGYLQDMQ 91

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASL 332
            VF+ +   +V+SW ++++G+  +G   + +R+  +M +DG ++ N  TF+  L   ++ 
Sbjct: 92  RVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNR 151

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS--------- 383
               +G   H Q+ K G     FVG+ +VDMY+  G I +A +  +E+ +          
Sbjct: 152 GFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMI 211

Query: 384 ---------------------ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                                  S+SW   I G  +N   +EA++ F +M       D+F
Sbjct: 212 TGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQF 271

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S+L AC    +L   +QIH+ I+++ ++ N+ VGS+L++ Y KC + + AE VF ++
Sbjct: 272 TFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKM 331

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V+SW +M+  Y QNG + +A+ +F  M    I P + T  +V+S+C++   +++G 
Sbjct: 332 RHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGA 391

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           + F       G++      + ++ L G+ G LE A      + I+     W  L + 
Sbjct: 392 Q-FHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS-WTALVSG 446



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 176/345 (51%), Gaps = 27/345 (7%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNG-YSTRNDSFPDGFIDDGCSNTVPV 106
           A QLF+  P++  +S + +I          G+++NG +    D F +  I+  C      
Sbjct: 223 AEQLFDNMPEKDSISWTTII---------TGLTQNGLFKEAVDKFKEMGIEGFC------ 267

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                   +D+     VL+ C     L+ G++ HA I +T    + FV ++L++MY KC 
Sbjct: 268 --------MDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           ++K   AV ++M + ++ S   +L GY +N   ++A   F  +   ++ P+ +T  ++++
Sbjct: 320 NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVIS 379

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C +L++++EG Q H Q +    +    VSNAL+T+Y KCG +E A  +F  +  R+ +S
Sbjct: 380 SCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS 439

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WTA+++G+ Q G   + + L   M   GI P+  TF   L++C+       GY +   ++
Sbjct: 440 WTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMV 499

Query: 347 K--RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           K  R   + D   T ++D+ S  G + EAK  + +M  S  ++ W
Sbjct: 500 KEHRITPIPDHY-TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGW 543



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 78/154 (50%), Gaps = 4/154 (2%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y++ LK C    + A  +++H RI+++       + ++LI  Y K G  ++A  VF  + 
Sbjct: 8   YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++ SWN+++ AYS+ G  +    +F+ M    +   NS    +LS  + +GL+ +  +
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNS----LLSGYAGNGLISESVR 123

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           V+  M+K+  +      +S M+ L    G +++ 
Sbjct: 124 VYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLG 157


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 203/643 (31%), Positives = 345/643 (53%), Gaps = 25/643 (3%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNG-YSTRNDSFPDGFIDDGCSNTV 104
           + A  LF++ P + G+   +++ NGY+        +NG +      F +    +   N+V
Sbjct: 199 HDARYLFDRMPSKDGV-LWNVMLNGYV--------KNGDWDNATGVFMEMRRTETNPNSV 249

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
              C              VLS C+ E  +  G + H L+  + +  D  V  +L+ MYAK
Sbjct: 250 TFAC--------------VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAK 295

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           CG +     +   MP  D+ + N +++GY +N   D+A   F ++    ++P+  T+S+ 
Sbjct: 296 CGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSF 355

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L +    + + +GK++H   ++        + +AL+ +Y KC  +E A  +F+     ++
Sbjct: 356 LPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDI 415

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +  TA+I+G+  +G     L +   + ++ +  N  T    L +CA L    +G   H  
Sbjct: 416 VVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGH 475

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           ++K G     +VG+AI+DMY+  G +  A +    +     +V WN+ I    +N K EE
Sbjct: 476 ILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI-SDKDAVCWNSMITSCSQNGKPEE 534

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           AI+ F QM       D  + S+ L AC+ LP+L   ++IH+ +++  F S++   S+LI+
Sbjct: 535 AIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALID 594

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KCG+ + A RVF  +   + VSWNS+I AY  +GR + ++ LF  M+ +GI+P + T
Sbjct: 595 MYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVT 654

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           FLA++SAC H+G V +G   F  M +E GI+    HY+CMVDL GRAG+L  A   I+++
Sbjct: 655 FLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSM 714

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P  P A +W  L  ACR H ++++AE  S+ + +LDP ++  YV LSN++A AG      
Sbjct: 715 PFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVL 774

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           + R LMK + + K PGCSWI+V N  + F + ++SH +  ++Y
Sbjct: 775 KIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 817



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 245/495 (49%), Gaps = 3/495 (0%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           +L DK     V+  C     + LGR  H  I       D FV +SL+  Y++ G I    
Sbjct: 143 TLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDAR 202

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +  +MP  D    N +L GY KN  +D A   F+++   +  PN  T++ +L++C S  
Sbjct: 203 YLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            I+ G QLH   +       + V+N LL MY KCG + DA  +F+ + + ++++W  +I+
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMIS 322

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ Q+G  ++   L   M    + P+  TF+  L   +       G   H  +I+ G++L
Sbjct: 323 GYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSL 382

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F+ +A++D+Y    ++ E  +++ +       V   A I+G+  N     A+E F  +
Sbjct: 383 DVFLKSALIDIYFKCRDV-EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 441

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           ++     +  T +S+L AC+ L +L   +++H  I+K+    + +VGS++++ Y KCG  
Sbjct: 442 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRL 501

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           + A + F  ++  D V WNSMI + SQNG+  +AI LF +M + G +    +  A LSAC
Sbjct: 502 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           ++   +  G+++   M++      +    S ++D+  + G L++A      +  K     
Sbjct: 562 ANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS- 619

Query: 593 WRPLFAACRCHSDLK 607
           W  + AA   H  LK
Sbjct: 620 WNSIIAAYGNHGRLK 634



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 233/484 (48%), Gaps = 9/484 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+    L  GR+ HA +    +  +  +   L+ MY  CG       +  Q+ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                  N ++ G+     FD A  F+ K+ G    P+ YT+  ++  CG L+++  G+ 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H +   + +     V ++L+  Y + G + DA  +F+ +  ++ + W  ++NG+ ++GD
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           ++    +   MR    +PN  TF   L+ CAS    + G   H  V+  G+ +   V   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ MY+  G +++A++    M K+   V+WN  I+G+ +N   +EA   F +M+      
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKT-DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKP 347

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  T+SS L   S   +L   ++IH  I+++    +V + S+LI+ Y KC   E A ++F
Sbjct: 348 DSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIF 407

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            Q T  D+V   +MI  Y  NG    A+ +F  ++ E +R  + T  +VL AC+    + 
Sbjct: 408 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 467

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA---LIFISNLPIKPTAPIWRPL 596
            G+++   ++K  G        S ++D+  + G+L++A    I IS+      A  W  +
Sbjct: 468 LGKELHGHILKN-GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD----KDAVCWNSM 522

Query: 597 FAAC 600
             +C
Sbjct: 523 ITSC 526


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 210/646 (32%), Positives = 347/646 (53%), Gaps = 46/646 (7%)

Query: 140 HALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HA     A+ G   VT  SL++  A+ G ++ M  +   +P  D  S N LLAG+++   
Sbjct: 64  HARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGA 123

Query: 199 FDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             +A   ++ L  D   V+P+  T S ++ +  +L     G+Q+H Q ++L + +     
Sbjct: 124 HARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTG 183

Query: 257 NALLTMY-------------------------------IKCGMMEDAESVFEGLVQRNVI 285
           + L+ MY                               ++C M+ +A ++FE + +R+ I
Sbjct: 184 SPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSI 243

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           +WT ++ G  Q+G   + L +   MR +G+  ++YTF   L +C +L     G   HA +
Sbjct: 244 TWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI 303

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
            +       FVG+A+VDMYS    +  A+   + M    + +SW A I G+ +N   EEA
Sbjct: 304 TRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM-MWKNIISWTAMIVGYGQNGCGEEA 362

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  FS+M R+    D+FT  S++ +C+ L SL    Q H   + S     V V ++L+  
Sbjct: 363 VRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTL 422

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCGS EDA R+F +++  D VSW +++  Y+Q G+A++ I LFEKM+ +G++P   TF
Sbjct: 423 YGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTF 482

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + VLSACS SGLV  G+  F SM +++ I+P + HY+CM+DL  R+G L+ A  FI  +P
Sbjct: 483 IGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMP 542

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
             P A  W  L +ACR   D+++ ++ ++ +L+LDP + A YV L +M+A  G   D  +
Sbjct: 543 RCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAK 602

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--- 702
            R+ M+ +++ KEPGCSWI+  NK++ F + ++SH     +YEKL+ L  ++ + G+   
Sbjct: 603 LRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPD 662

Query: 703 --------TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                    D EK   + +HSE+LA+ FGLI +P +      + L 
Sbjct: 663 VSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLR 708



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 183/400 (45%), Gaps = 34/400 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL---- 190
           LGR+ H  I +       F  + LV+MYAK G I     V  +M   ++  CN ++    
Sbjct: 163 LGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLL 222

Query: 191 ---------------------------AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
                                       G  +N L  +A   F ++    V  + YT+ +
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+L+A++EGKQ+HA   +  Y     V +AL+ MY KC  +  AE+VF  ++ +N
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +ISWTA+I G+ Q+G  E+ +R+   M+ DGI P+++T    ++SCA+L +   G  FH 
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     V  A+V +Y   G I +A +   EM      VSW A + G+ +  K +
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVMGYAQFGKAK 461

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSL 462
           E I+ F +M+      D  T+  +L ACS    +       HS              + +
Sbjct: 462 ETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCM 521

Query: 463 IEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
           I+ Y++ G  + AE    Q+    D   W +++ A    G
Sbjct: 522 IDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRG 561



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C     LE G++ HA IT+T    + FV ++LV+MY+KC  ++   AV
Sbjct: 275 IDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAV 334

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            ++M + +I S   ++ GY +N   ++A   F ++    ++P+ +T  ++++ C +L+++
Sbjct: 335 FRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASL 394

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           +EG Q H   +         VSNAL+T+Y KCG +EDA  +F+ +   + +SWTA++ G+
Sbjct: 395 EEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGY 454

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMAL 352
            Q G  ++ + L   M   G+ P+  TF   L++C  + L +    Y FH+      +  
Sbjct: 455 AQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSY-FHSMQQDHDIVP 513

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            D   T ++D+YS  G + +A++ +K+M +   +  W
Sbjct: 514 LDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGW 550


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 196/564 (34%), Positives = 320/564 (56%), Gaps = 1/564 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + HAL  KT+   D FV +SL+NMY K G +     V   +P  +  S   +++GYA 
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
             +  +A+  F  +   +   + + Y+++L+       +  GKQ+H   +K   LS  +V
Sbjct: 192 ERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+TMY KCG ++DA   FE    ++ I+W+A+I G+ Q GD  + L L   M  +G 
Sbjct: 252 GNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E+TF   + +C+ +     G   H   +K G     +  TA+VDMY+  G + +A+K
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARK 371

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + K    V W + I+G+ +N + E A+  + +M        E T +S+L+ACS L 
Sbjct: 372 GFDYL-KEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L   +QIH++ +K  F   V +GS+L   Y KCGS ED   VF ++ + D+++WN+MI 
Sbjct: 431 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 490

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQNG   KA+ LFE++     +P   TF+ VLSACSH GLV+ G+  F  M+ E+GI+
Sbjct: 491 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIV 550

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+L RAGKL     FI +  I     +WR L  ACR + + ++  +  ++
Sbjct: 551 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 610

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ++EL   +++ Y+ LS++Y   G   D E  R+LMK++ ++KEPGCSWIE+ ++++ F  
Sbjct: 611 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 670

Query: 676 QNKSHSEMPKVYEKLKQLMQQIED 699
            ++ H ++ K+  +L++L   ++D
Sbjct: 671 GDQIHPQIVKICSELRRLRDHMKD 694



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 232/467 (49%), Gaps = 4/467 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C+R++ L+ G+  HA + +T      ++T SLVN+YAKCG I     V + +  
Sbjct: 14  VDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITN 73

Query: 181 LDIASCNCLLAGYAKNALFDQAF--SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            D+ S NCL+ GY++      +F    F ++   +  PN +T+S +     S      G 
Sbjct: 74  KDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGL 133

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q HA  +K        V ++L+ MY K G M DA  VF+ + +RN +SW  II+G+    
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMER 193

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              +   L  LMR +    +++ +T  L++       H G   H   +K G+     VG 
Sbjct: 194 MAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGN 253

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V MY   G + +A K   E+      ++W+A I G+ +   + EA+  F  M  N   
Sbjct: 254 ALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             EFT+  ++ ACS + +L   +QIH   +K+ +E  ++  ++L++ Y KCGS  DA + 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKG 372

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  L   D+V W SMI  Y+QNG    A+ L+ +M +E I P   T  +VL ACS    +
Sbjct: 373 FDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAAL 432

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + G+++    +K YG   E    S +  +  + G LE   +    +P
Sbjct: 433 EQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/513 (25%), Positives = 243/513 (47%), Gaps = 46/513 (8%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P H ++  +L  C     + +GK +HAQ ++    S   ++N+L+ +Y KCG +  A+ V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 276 FEGLVQRNVISWTAIINGFKQHG--DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           FE +  ++V+SW  +ING+ Q G   Y   + L   MR +   PN +TF+    + +S  
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
            +  G   HA  IK       FVG+++++MY  +G + +A+K    + +  ++VSW   I
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER-NTVSWATII 186

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+   +   EA E F  M R + A D+F Y+S+L A ++   +   +QIH   +K+   
Sbjct: 187 SGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S   VG++L+  Y KCG  +DA + F      D ++W++MI  Y+Q G + +A+ LF  M
Sbjct: 247 SIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM 306

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK----------------------- 550
            + G +P+  TF+ V++ACS  G +++G+++    +K                       
Sbjct: 307 HLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSL 366

Query: 551 -------EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAAC 600
                  +Y   P+   ++ M+    + G+ E AL     + ++   P       +  AC
Sbjct: 367 VDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRAC 426

Query: 601 RCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
              + L+  + I  Q ++     +  +   LS MYA+ G   D     + M  ++I    
Sbjct: 427 SSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIM--- 483

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
                  +N +    SQN    +  +++E+L+ 
Sbjct: 484 ------TWNAMISGLSQNGEGLKALELFEELRH 510



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 174/341 (51%), Gaps = 2/341 (0%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E   DK     VLS  +  + +  G++ H L  K  +     V  +LV MY KCG +   
Sbjct: 209 EGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           +   +     D  + + ++ GYA+     +A + F  +     +P+ +T+  ++  C  +
Sbjct: 269 LKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            A++EGKQ+H  ++K  Y  +     AL+ MY KCG + DA   F+ L + +++ WT++I
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMI 388

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+ Q+G+ E  L L C M+ + I P+E T    L +C+SL     G   HAQ IK G +
Sbjct: 389 SGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 448

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L   +G+A+  MY+  G + +     + M  S   ++WNA I+G  +N +  +A+E F +
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRM-PSRDIMTWNAMISGLSQNGEGLKALELFEE 507

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           +       D  T+ ++L ACS +  L    +++ R++  +F
Sbjct: 508 LRHGTTKPDYVTFVNVLSACSHM-GLVERGKVYFRMMLDEF 547


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/672 (30%), Positives = 359/672 (53%), Gaps = 71/672 (10%)

Query: 127 CSREECLELGRRYH-------ALITKTAVCGDQFVTASLVNMYAKCGDI----------- 168
           C+ + C  LG  +H        L+TK    GD  V   +V+M+ +CG +           
Sbjct: 167 CAMKSCGALG--WHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE 224

Query: 169 -------KSMVA-------------VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
                   SM+A             + + MP  D+ S N +++  +++    +A S  + 
Sbjct: 225 RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVD 284

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    V+ +  TY++ L  C  LS++  GKQLHAQ ++        V++A++ +Y KCG 
Sbjct: 285 MHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGC 344

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            ++A  VF  L  RN +SWT +I GF Q+G + + L L   MR + +  +++     ++ 
Sbjct: 345 FKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISG 404

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK------------- 375
           C++  +  +    H+  +K G      +  +++ MY+  G +  A+              
Sbjct: 405 CSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSW 464

Query: 376 --------QLKEMGK---------SASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDA 417
                   Q+  +GK         + + ++WNA +  + ++   E+ ++ +S M+   D 
Sbjct: 465 TGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDV 524

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  TY ++ + C+ + +    +QI    VK     +  V +++I  Y+KCG   +A +
Sbjct: 525 IPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARK 584

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F  L+  D+VSWN+MI  YSQ+G  ++AI +F+ M+ +G +P   +++AVLS+CSHSGL
Sbjct: 585 IFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGL 644

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           VQ+G+  F+ + +++ + P   H+SCMVDLL RAG L  A   I  +P+KPTA +W  L 
Sbjct: 645 VQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALL 704

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +AC+ H + ++AE  +K + +LD  D+  Y+ L+ +YA+AG   D+ + RKLM+ K I K
Sbjct: 705 SACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKK 764

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSER 717
            PG SW+EV NK++ F +++ SH ++  + EKL +LM++I  +G+   E     ++HSE+
Sbjct: 765 NPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLRSEIHHSEK 824

Query: 718 LAVGFGLISLPA 729
           LAV FG+++LPA
Sbjct: 825 LAVAFGIMNLPA 836



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 207/436 (47%), Gaps = 37/436 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N YAK G +     +  +MP  D+ S N L++GY ++  F  A   F+ +    D  P
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-------- 268
           N +T+   +  CG+L   +   QL     K  +     V+  ++ M+++CG         
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220

Query: 269 -----------------------MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                  ++ A  +FE + +R+V+SW  +++   Q G   + L 
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +   M   G+  +  T+T +L +CA L +   G   HAQVI+    +  +V +A+V++Y+
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EA++    + +  ++VSW   I GF +     E++E F+QM       D+F  +
Sbjct: 341 KCGCFKEARRVFSSL-RDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALA 399

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +I+  CS    +    Q+HS  +KS     V + +SLI  Y KCG+ ++AE +FS +   
Sbjct: 400 TIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEER 459

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW  M+ AYSQ G   KA   F+ M    +   N    A+L A    G  +DG K++
Sbjct: 460 DIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWN----AMLGAYIQHGAEEDGLKMY 515

Query: 546 ESMVKEYGILPEEAHY 561
            +M+ E  ++P+   Y
Sbjct: 516 SAMLTEKDVIPDWVTY 531



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 174/362 (48%), Gaps = 33/362 (9%)

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY 162
           +V V  ++    LD       L+ C++   L  G++ HA + ++  C D +V +++V +Y
Sbjct: 280 SVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELY 339

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           AKCG  K    V   +   +  S   L+ G+ +   F ++   F ++    +  + +  +
Sbjct: 340 AKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALA 399

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV------- 275
           T+++ C +   +   +QLH+ ++K  +     +SN+L++MY KCG +++AES+       
Sbjct: 400 TIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEER 459

Query: 276 ------------------------FEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLM 310
                                   F+G+  RNVI+W A++  + QHG  E  L++   ++
Sbjct: 460 DIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAML 519

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            E  + P+  T+      CA +  + +G       +K G+ L   V  A++ MYS  G I
Sbjct: 520 TEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRI 579

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            EA+K    + +    VSWNA I G+ ++   ++AIE F  M++  A  D  +Y ++L +
Sbjct: 580 SEARKIFDFLSRK-DLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSS 638

Query: 431 CS 432
           CS
Sbjct: 639 CS 640



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 31/309 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N ++  Y K G + DAE +F  + +R+V SW  +++G+ Q G +   +     MR  G  
Sbjct: 99  NIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDS 158

Query: 317 -PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN +TF  A+ SC +L    +       + K G      V T IVDM+   G +  A K
Sbjct: 159 LPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASK 218

Query: 376 QLKEMGKSA------------------------------SSVSWNAQIAGFFRNQKTEEA 405
           Q  ++ +                                  VSWN  ++   ++ +  EA
Sbjct: 219 QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREA 278

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +     M       D  TY+S L AC+ L SL   +Q+H+++++S    + +V S+++E 
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCG +++A RVFS L   + VSW  +I  + Q G   +++ LF +M  E +       
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398

Query: 526 LAVLSACSH 534
             ++S CS+
Sbjct: 399 ATIISGCSN 407



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 148/323 (45%), Gaps = 55/323 (17%)

Query: 323 TVALASCASLRNSHMGYMFHAQVI------KRGMALGDFVGTAIV------DMYSGLGEI 370
           +V LAS   L+N+    + HA +        RG+  GD     ++      + Y+ LG +
Sbjct: 56  SVGLASAVFLQNT----LLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGSL 111

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-DAACDEFTYSSILK 429
            +A++    M +     SWN  ++G++++ +  +A+E+F  M R+ D+  + FT+   +K
Sbjct: 112 SDAEELFGRMPRR-DVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ-------- 481
           +C  L       Q+   + K  F+ +  V + +++ + +CG+ + A + FSQ        
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230

Query: 482 -----------------------LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
                                  +   DVVSWN M+ A SQ+GRAR+A+ +   M   G+
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEI 576
           R  ++T+ + L+AC+    +  G+++   +++    LP    Y  S MV+L  + G  + 
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS---LPCIDPYVASAMVELYAKCGCFKE 347

Query: 577 ALIFISNLPIKPTAPIWRPLFAA 599
           A    S+L  + T   W  L   
Sbjct: 348 ARRVFSSLRDRNTVS-WTVLIGG 369



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 5/158 (3%)

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF-SQLTAAD 486
           L++C    +LA    +H R+V     S V + ++L+ AY  CG+  DA  +    +T  +
Sbjct: 35  LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V++ N M+  Y++ G    A  LF +M    +   N+    ++S    SG   D  + F 
Sbjct: 95  VITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNT----LMSGYYQSGRFLDAMESFV 150

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           SM +    LP    + C +   G  G  E+AL  +  L
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLL 188


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 208/627 (33%), Positives = 340/627 (54%), Gaps = 31/627 (4%)

Query: 132 CLELG-----RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+E+G     R  H  + KT    D FV  SLVN Y +CG  +    +   MP  ++ + 
Sbjct: 88  CVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTW 147

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             L+ GY  N+        F+++  +   P+HYT    L  C +   +D GKQ+H   +K
Sbjct: 148 TALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIK 207

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD-YEKPLR 305
               S T++ N+L ++Y K G ++ A   F  + ++NVI+WT +I+   +  +  E  L 
Sbjct: 208 YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLS 267

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   M  DG+ PNE+T T  ++ C +  + ++G    A   K G      V  + + +Y 
Sbjct: 268 LFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYL 327

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTEEAIEAFSQMVR 414
             GE  EA +  ++M + AS ++WNA I+G+ +             +  +A+  F  + R
Sbjct: 328 RKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKR 386

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D FT+SSIL  CS + +L   EQIH++ +KS F S+V V S+L+  YNKCG  +D
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A + F ++     V+W SMI  YSQ+G+ ++AI LFE+M + G+RP   TF+++LSACS+
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV++ +  F+ M KEY I P   HY CM+D+  R G++E A  FI     +P   IW 
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 566

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L A CR H ++++A + + ++LEL P     Y+ L NMY       D    RKLMK ++
Sbjct: 567 SLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLMKQED 626

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------TDNE 706
           +      SWI + +K+Y F + +++H +  ++Y+ L+ L+++ + IG+        +D+E
Sbjct: 627 VGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAELSDSE 686

Query: 707 KEDR-----VLYHSERLAVGFGLISLP 728
            +++     + +HSERLAV  GL+  P
Sbjct: 687 DDEKPAAGSLKHHSERLAVALGLLQTP 713



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/471 (23%), Positives = 222/471 (47%), Gaps = 25/471 (5%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L  C  + ++   + +H    K    +   V+ +L+  Y++CG   DA  +F+G+ 
Sbjct: 81  YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RNV++WTA++ G+  +      L +   M E G  P+ YT    L +C +  +  +G  
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   IK G      +G ++  +Y+ LG +  A +    + +  + ++W   I+    ++
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVITWTTMISACAEDE 259

Query: 401 K-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           +  E  +  F  M+ +    +EFT +S++  C     L   +Q+ +   K   E+N+ V 
Sbjct: 260 ECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVK 319

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ-----------NGRARKAII 508
           +S +  Y + G  ++A R+F Q+  A +++WN+MI  Y+Q             R  +A+ 
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALT 379

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F  +    ++P   TF ++LS CS    ++ G+++    +K  G L +    S +V++ 
Sbjct: 380 IFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLSDVVVNSALVNMY 438

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILELDPDDAAV 626
            + G ++ A      +P + T   W  + +    H   + A   F   ++  + P++   
Sbjct: 439 NKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE-IT 496

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIYR 672
           +V+L +  + AGL  +AE    +MK KE   EP     GC  I+++ ++ R
Sbjct: 497 FVSLLSACSYAGLVEEAEHYFDMMK-KEYCIEPVVDHYGC-MIDMFVRLGR 545



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 171/321 (53%), Gaps = 23/321 (7%)

Query: 111 LESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           ++ ++  +F +  V+S C     L LG++  A   K     +  V  S + +Y + G+  
Sbjct: 274 MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETD 333

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAK---NALFD--------QAFSFFLKLDGIDVQPNH 218
             + + +QM    I + N +++GYA+   +A  D        QA + F  L    ++P+ 
Sbjct: 334 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDL 393

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           +T+S++L++C ++ A+++G+Q+HAQT+K  +LS   V++AL+ MY KCG ++DA   F  
Sbjct: 394 FTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLE 453

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  R  ++WT++I+G+ QHG  ++ ++L   MR  G+ PNE TF   L++C     S+ G
Sbjct: 454 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC-----SYAG 508

Query: 339 YMFHAQ----VIKRGMALGDFVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +  A+    ++K+   +   V     ++DM+  LG + +A   +K  G   +   W++ 
Sbjct: 509 LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSL 568

Query: 393 IAGFFRNQKTEEAIEAFSQMV 413
           +AG   +   E A  A  +++
Sbjct: 569 VAGCRSHGNMELAFYAADKLL 589



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 140/296 (47%), Gaps = 16/296 (5%)

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +T +  EA + M+    A     Y  +L  C  + SL     +H  + K+   +++ V +
Sbjct: 59  RTLDVQEAMT-MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVAT 117

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL+ AY +CG+  DA R+F  +   +VV+W +++  Y+ N +    + +F +M+  G  P
Sbjct: 118 SLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
           ++ T  A L+AC  S  V  G++V    +K YG     +  + +  L  + G L+ AL  
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRA 236

Query: 581 ISNLPIKPTAPIWRPLFAAC----RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
              +P K     W  + +AC     C  +L ++ FI   +  + P++     TL+++ + 
Sbjct: 237 FWRIPEK-NVITWTTMISACAEDEEC-VELGLSLFIDMLMDGVMPNE----FTLTSVMSL 290

Query: 637 AGLQADAEEQRKLMKMKEISKEPGC-SWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
            G + D    +++   +  S + GC + + V N     + +     E  +++E+++
Sbjct: 291 CGTRLDLNLGKQV---QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME 343


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 201/635 (31%), Positives = 349/635 (54%), Gaps = 12/635 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +L  C   E L+ G+     I++T+   D FV  +L+ MYA+C   +    V 
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ + + ++  +A +    +A  +F  +    + PN  T+ ++L    + S ++
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 379

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           E  ++H    +      T + NAL+ +Y +C   +DA +VF+ L   N+ISW ++I  + 
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYV 439

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q   ++  L+L   M++ GI P+   F   L +C    +     + H  V + G+     
Sbjct: 440 QCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPL 499

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V T++V+MY+  GE+  A+  L+EM +   + +WN  I G+  + ++ EA+EA+ ++   
Sbjct: 500 VQTSLVNMYAKAGELDVAEVILQEMDEQQIT-AWNVLINGYALHGRSREALEAYQKLQLE 558

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ T+ S+L AC+   SLA  + IHS  V+   +S+V V ++L   Y+KCGS E+A
Sbjct: 559 AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENA 618

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            R+F  +     VSWN M++AY+Q+G + + + L  KM  EG++    TF++VLS+CSH+
Sbjct: 619 RRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHA 678

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+ +G + F S+  + GI  +  HY C+VDLLGRAGKL+ A  +IS +P++P    W  
Sbjct: 679 GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWAS 738

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  ACR   DL   +  + ++LELDP +++  V LSN+Y+E G   +A + R+ M  + +
Sbjct: 739 LLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRV 798

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K PG S I+V NK++ F  ++ SH    ++Y+K+++L   + + G+            +
Sbjct: 799 KKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDE 858

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
            +KE  + YHSE+LA+ FGLIS P  +     + L
Sbjct: 859 EQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNL 893



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 236/466 (50%), Gaps = 8/466 (1%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY++CG +   VA   ++   ++ S N +++ Y+    F +A + F  +    V PN  T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
              +L  CGS   + +G  +HA +++  +   T V+ ALL MY KCG + DA+SVFE + 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 281 QRNVISWTAIINGFKQHG-DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           ++NV++W A++  +   G  ++  + L   M  +G+  N  TF   L S         G 
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H+ V +   +L  FV TA+V+ Y+  G + +A+K    M    S  +WN+ I+ +  +
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGM-PCRSVGTWNSMISAYSIS 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           +++ EA   F +M +    CD  T+ SIL AC    +L   + +   I ++ FE ++ VG
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++LI  Y +C S EDA +VF ++   ++++W+++I A++ +G   +A+  F  M  EGI 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   TF+++L+  +    +++  ++   ++ E+G+       + +V++ GR    + A  
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRI-HLLITEHGLDDTTTMRNALVNVYGRCESPDDART 418

Query: 580 FISNLPIKPTAPIWRPL---FAACRCHSDLKMAEFISKQILELDPD 622
               L + P    W  +   +  C  H D  +  F + Q   + PD
Sbjct: 419 VFDQLEL-PNLISWNSMIGIYVQCERHDD-ALQLFRTMQQQGIQPD 462



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 258/527 (48%), Gaps = 10/527 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+     + L  G+  H+ + ++    D FV  +LVN Y KCG +     V   MP 
Sbjct: 164 LNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC 223

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + + N +++ Y+ +    +AF  F ++     + +  T+ ++L  C +   +  GK +
Sbjct: 224 RSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHV 283

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                +  +     V  AL+TMY +C   EDA  VF  + Q N+I+W+AII  F  HG  
Sbjct: 284 RESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHC 343

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LR   +M+++GI PN  TF   L    +          H  + + G+     +  A+
Sbjct: 344 GEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNAL 403

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V++Y G  E  +  + + +  +  + +SWN+ I  + + ++ ++A++ F  M +     D
Sbjct: 404 VNVY-GRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPD 462

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              + +IL AC++     T + +H  + +S    +  V +SL+  Y K G  + AE +  
Sbjct: 463 RVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQ 522

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++    + +WN +I  Y+ +GR+R+A+  ++K+ +E I     TF++VL+AC+ S  + +
Sbjct: 523 EMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAE 582

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+ +  + V E G+  +    + + ++  + G +E A     ++PI+ +A  W  +  A 
Sbjct: 583 GKMIHSNAV-ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAY 640

Query: 601 RCHSD----LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
             H +    LK+   + ++ ++L   +   +V++ +  + AGL A+ 
Sbjct: 641 AQHGESEEVLKLIRKMEQEGVKL---NGITFVSVLSSCSHAGLIAEG 684



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 237/515 (46%), Gaps = 5/515 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+ C     L  G   HAL  +     +  V  +L+NMY KCG +    +V ++M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 180 YLDIASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             ++ + N +L  Y+ +   +  A   F ++    V+ N  T+  +L       A+ +GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H+   + ++     V+ AL+  Y KCG + DA  VF+G+  R+V +W ++I+ +    
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              +   +   M+++G   +  TF   L +C +      G      + +    L  FVGT
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MY+      +A +    M K  + ++W+A I  F  +    EA+  F  M +    
Sbjct: 301 ALITMYARCRSPEDAAQVFGRM-KQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +  T+ S+L   +    L    +IH  I +   +    + ++L+  Y +C S +DA  V
Sbjct: 360 PNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTV 419

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F QL   +++SWNSMI  Y Q  R   A+ LF  M  +GI+P    F+ +L AC+  G  
Sbjct: 420 FDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT-IGSH 478

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
              +K+    V+E G+       + +V++  +AG+L++A + +  +  +     W  L  
Sbjct: 479 GRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITA-WNVLIN 537

Query: 599 ACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSN 632
               H   + A E   K  LE  P D   ++++ N
Sbjct: 538 GYALHGRSREALEAYQKLQLEAIPVDKVTFISVLN 572



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 8/239 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +DK   I VL+ C+    L  G+  H+   +  +  D  V  +L NMY+KCG +++   +
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 621

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP     S N +L  YA++   ++      K++   V+ N  T+ ++L+ C     I
Sbjct: 622 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 681

Query: 235 DEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
            EG Q  H+         KT     L+ +  + G +++AE     + ++  +++W +++ 
Sbjct: 682 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLG 741

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             +   D ++       + E  +DP   + +V L++  S R    G   +A  ++R MA
Sbjct: 742 ACRVQKDLDRGKLAAGKLLE--LDPGNSSASVVLSNIYSER----GDWKNAAKLRRAMA 794


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 195/618 (31%), Positives = 345/618 (55%), Gaps = 14/618 (2%)

Query: 136 GRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           G++ HA +I+ + +  + ++   L   YA CG +     +   +   +    N ++ GYA
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
            N L  ++   + ++     + +++TY  +L  CG L  ++ G+++H++ +     S   
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIY 197

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N+LL MY K G M  A  VF+ + +R++ SW  +I+G+ ++ D      +  LM + G
Sbjct: 198 VGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAG 257

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA-LGDFVGTAIVDMYSGLGEIWEA 373
           +  +  T    L++CA L+    G + H   ++  +     F   ++++MY     + +A
Sbjct: 258 LFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDA 317

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           ++ L E  +   +VSWN+ I G+ RN    E++  F +M  + +  D+ T+ ++L AC  
Sbjct: 318 RR-LFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           + +L     IHS +VK  F++N  VG++L++ Y+KCGS   + RVF ++    +VSW++M
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +  Y  +GR R+AI + + M    + P N  F ++LSACSH+GLV +G+++F  M KEY 
Sbjct: 437 VAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYN 496

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           + P  +HYSCMVDLLGRAG L+ A + I  + IKPT+ IW  L  A R H ++K+AE  +
Sbjct: 497 VKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISA 556

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           +++ +++P   + Y+ LSN+YA      D E  R +++ K + K PGCS+IE+ N ++RF
Sbjct: 557 QKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHRF 616

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGF 722
              +KSH +   +Y KL +L QQ+++ G+           + E ++++L+ HSERLA+ F
Sbjct: 617 LVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSERLAIAF 676

Query: 723 GLISLPAKNKFECSRTLE 740
            LI+         ++ L 
Sbjct: 677 ALINTGPGTVIRITKNLR 694



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 2/311 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     +E+GRR H+ +    +  D +V  SL+ MYAK GD+ +   V  +M   D
Sbjct: 167 VLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERD 226

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++GYAKNA    AF  F  +    +  +  T   +L+ C  L A+ EGK +H 
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHG 286

Query: 243 QTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++    +     +N+L+ MY  C  M DA  +FE +  ++ +SW ++I G+ ++GD  
Sbjct: 287 YAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAF 346

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + LRL   M  DG  P++ TF   L +C  +     G   H+ ++K+G      VGTA+V
Sbjct: 347 ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALV 406

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMYS  G +  +++   EM    S VSW+A +AG+  + +  EAI     M  N    D 
Sbjct: 407 DMYSKCGSLACSRRVFDEM-PDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDN 465

Query: 422 FTYSSILKACS 432
             ++SIL ACS
Sbjct: 466 GVFTSILSACS 476



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 4/185 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   I VL  C +   L  G   H+ + K     +  V  +LV+MY+KCG +     V 
Sbjct: 363 DQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVF 422

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP   + S + ++AGY  +    +A S    +    V P++  ++++L+ C     + 
Sbjct: 423 DEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVV 482

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EGK++  + M+ +Y  K A+S+   ++ +  + G +++A  +   + ++     W A++ 
Sbjct: 483 EGKEIFYK-MEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLT 541

Query: 293 GFKQH 297
             + H
Sbjct: 542 ASRLH 546


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 198/603 (32%), Positives = 330/603 (54%), Gaps = 2/603 (0%)

Query: 111 LESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           +E +   +FV+   +S CS    LE GR+ H    ++A   D  V   L+++Y KC  + 
Sbjct: 214 IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLS 273

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           +   +   M Y ++ S   +++GY +N+   +A + F  +     QP+ +  +++L  CG
Sbjct: 274 AARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCG 333

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           SL+AI +G+Q+HA  +K    +   V NAL+ MY KC  + +A +VF+ L + + IS+ A
Sbjct: 334 SLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNA 393

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+ ++ D  + + +   MR   + P+  TF   L   +S     +    H  +IK G
Sbjct: 394 MIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSG 453

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +L  +  +A++D+YS    + +AK     M      V WN+ I G  +N++ EEAI+ F
Sbjct: 454 TSLDLYAASALIDVYSKCSLVNDAKTVFN-MLHYKDMVIWNSMIFGHAQNEQGEEAIKLF 512

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           +Q++ +  A +EFT+ +++   S L S+   +Q H+ I+K+  +++ HV ++LI+ Y KC
Sbjct: 513 NQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKC 572

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  ++   +F      DV+ WNSMI  Y+Q+G A +A+ +F  M    + P   TF+ VL
Sbjct: 573 GFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVL 632

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SAC+H+G V +G   F SM   Y I P   HY+ +V+L GR+GKL  A  FI  +PIKP 
Sbjct: 633 SACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPA 692

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           A +WR L +AC    + ++  + ++  L  DP D+  YV LSN+YA  GL AD    R+ 
Sbjct: 693 AAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQ 752

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKED 709
           M      KE GCSWIEV  +++ F  + + H E   +Y  L +L   I+++G+  +  + 
Sbjct: 753 MDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVPDTSDH 812

Query: 710 RVL 712
            +L
Sbjct: 813 TLL 815



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 286/584 (48%), Gaps = 13/584 (2%)

Query: 98  DGCSNTVPVTCYSLESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTA 156
           D C+ ++ V        +  +F++  VL  C++ + + LG + H +  K  +  + +V  
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +L+N+YAK G +   + V   +P     + N ++ GYA+      A   F ++    V+P
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + +  ++ ++ C +L  ++ G+Q+H    +    + T+V N L+ +Y KC  +  A  +F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  RN++SWT +I+G+ Q+    + + +   M + G  P+ +  T  L SC SL    
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA VIK  +   ++V  A++DMY+    + EA+     + +   ++S+NA I G+
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAED-DAISYNAMIEGY 398

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N+   EA+  F +M          T+ S+L   S   ++   +QIH  I+KS    ++
Sbjct: 399 SKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDL 458

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           +  S+LI+ Y+KC    DA+ VF+ L   D+V WNSMI  ++QN +  +AI LF ++++ 
Sbjct: 459 YAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS 518

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-E 575
           G+ P   TF+A+++  S    +  GQ+ F + + + G+  +    + ++D+  + G + E
Sbjct: 519 GMAPNEFTFVALVTVASTLASMFHGQQ-FHAWIIKAGVDNDPHVSNALIDMYAKCGFIKE 577

Query: 576 IALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
             ++F S          W  +    A   H++  +  F      E++P +   +V + + 
Sbjct: 578 GRMLFEST--CGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP-NYVTFVGVLSA 634

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
            A AG   +       MK      EPG   IE Y  +   F ++
Sbjct: 635 CAHAGFVGEGLNHFNSMK-SNYDIEPG---IEHYASVVNLFGRS 674



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 203/412 (49%), Gaps = 2/412 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA  T      D F+T  L+  Y+  G ++    +  +MP+ ++ S   +++ Y ++   
Sbjct: 41  HARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRD 100

Query: 200 DQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           D A S F+       + PN +  +++L  C    A+  G+Q+H   +KL   +   V  A
Sbjct: 101 DCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTA 160

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ +Y K G M++A  VF  L  R  ++W  +I G+ Q G     L L   M  +G+ P+
Sbjct: 161 LINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPD 220

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            +    A+++C++L     G   H    +        V   ++D+Y     +  A+K   
Sbjct: 221 RFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFD 280

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            M +  + VSW   I+G+ +N    EAI  F  M +     D F  +SIL +C  L ++ 
Sbjct: 281 CM-EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              QIH+ ++K+  E++ +V ++LI+ Y KC    +A  VF  L   D +S+N+MI+ YS
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +N    +A+ +F++M    +RP+  TF+++L   S    ++  +++   ++K
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 2/312 (0%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA+      L    ++N LL  Y   G + DA  +F+ +  RN++SW ++I+ + QHG 
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 300 YEKPLRLVCLMREDGID-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            +  + L    ++   + PNE+     L +C   +   +G   H   +K  +    +VGT
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++++Y+ LG + EA      +    + V+WN  I G+ +      A+E F +M      
Sbjct: 160 ALINLYAKLGCMDEAMLVFHAL-PVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D F  +S + ACS L  L    QIH    +S  E++  V + LI+ Y KC     A ++
Sbjct: 219 PDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  +   ++VSW +MI  Y QN    +AI +F  M   G +P      ++L++C     +
Sbjct: 279 FDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338

Query: 539 QDGQKVFESMVK 550
             G+++   ++K
Sbjct: 339 WQGRQIHAHVIK 350



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH+R   +    ++ + + L+  Y+  G   DA  +F ++   ++VSW S+I  Y+Q+GR
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
              AI LF           N   LA VL AC+ S  V  G++V    VK    L  +A+ 
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVK----LDLDANV 155

Query: 562 ---SCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
              + +++L  + G ++ A++    LP++ T   W
Sbjct: 156 YVGTALINLYAKLGCMDEAMLVFHALPVR-TPVTW 189


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 209/607 (34%), Positives = 327/607 (53%), Gaps = 16/607 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQ----------FVTASLVNMYAKCGDIKSMV 172
           +LS C RE  L LG   HA I K     D            V  SL++MY++CG+++   
Sbjct: 50  LLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDAT 109

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGS 230
            V   MP  D  S N  ++G   N   +  F  F +L   GI  Q +  T +T+L  C  
Sbjct: 110 KVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGI-YQFDQATLTTVLTACDK 168

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
                  K +H+      Y  +  V NAL+T Y +CG       VF+ + ++NV++WTA+
Sbjct: 169 PEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAV 228

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G  Q   YE+ L+L   MR+  +DPN  T+  +L +C+ L+    G   H  V K G+
Sbjct: 229 ISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGV 288

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                + +A++DMYS  G + +A K + E  +    VS    + G  +N   EE+I+ F 
Sbjct: 289 HFDLCIESALMDMYSKCGSLEDAWK-IFESAEEVDEVSMTVILVGLAQNGFEEESIQVFV 347

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +MV+N    D    S+IL    +  SLA  +QIHS I+K  F SN  V + LI  Y+KCG
Sbjct: 348 KMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCG 407

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             +D+ ++F  +   + VSWNSMI A++++G   +A+ L+E+M +EG+ PT+ TFL++L 
Sbjct: 408 DLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLH 467

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+H GLV+ G    ESM K+YGI P   HY+C+VD++GRAG L  A  FI  LP KP  
Sbjct: 468 ACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGI 527

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +W+ L  AC  H + +M ++ + Q+    P+  A Y+ L+N+Y+  G   +     K M
Sbjct: 528 LVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKM 587

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDR 710
           K   ++KE G SWIE+  +I+ F  +++ H     +Y  L +L + + D G+  +++   
Sbjct: 588 KDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKR--F 645

Query: 711 VLYHSER 717
           +LY+ ++
Sbjct: 646 ILYYLDQ 652



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 192/404 (47%), Gaps = 22/404 (5%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKT---------AVSNALLTMYIKC 266
           N    S +L++CG    +  G  LHA  +K   +L             V N+LL+MY +C
Sbjct: 43  NQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRC 102

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI-DPNEYTFTVA 325
           G + DA  VF+ +  ++ ISW + I+G   +GD E   R+   + E GI   ++ T T  
Sbjct: 103 GELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTV 162

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +C      ++  M H+ V   G      VG A++  Y   G     ++   EM +  +
Sbjct: 163 LTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEK-N 221

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+W A I+G  + Q  EE+++ F +M       +  TY S L ACS L ++    QIH 
Sbjct: 222 VVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHG 281

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            + K     ++ + S+L++ Y+KCGS EDA ++F      D VS   ++   +QNG   +
Sbjct: 282 LVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEE 341

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE-YGILPEEAHY--- 561
           +I +F KMV  G+    +   A+L        +  G+++   ++K+ +G     ++Y   
Sbjct: 342 SIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFG-----SNYFVN 396

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
           + ++++  + G L+ ++     +P + +   W  + AA   H +
Sbjct: 397 NGLINMYSKCGDLDDSIKIFCWMPQRNSVS-WNSMIAAFARHGN 439



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           ++D   +  +L     +  L LG++ H+LI K +   + FV   L+NMY+KCGD+   + 
Sbjct: 355 VIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIK 414

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSL 231
           +   MP  +  S N ++A +A++    +A   +  ++L+G  V P   T+ ++L  C  +
Sbjct: 415 IFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEG--VWPTDVTFLSLLHACAHV 472

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVISWT 288
             +++G     ++M   Y     + +   ++ M  + G++ +A+   E L ++  ++ W 
Sbjct: 473 GLVEKGMGF-LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQ 531

Query: 289 AIINGFKQHGDYE 301
           A++     HG+ E
Sbjct: 532 ALLGACSIHGNSE 544


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/620 (32%), Positives = 330/620 (53%), Gaps = 45/620 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--D 210
           F   +L++  A    +  M ++   M   D  S N ++AG++      +A   +  L   
Sbjct: 73  FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------- 263
           G  V+P+  T S M+    +L     G+Q H Q ++L +     V + L+ MY       
Sbjct: 133 GSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIG 192

Query: 264 ------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
                                   ++C M+E+A  +FE +  R+ I+WT ++ GF Q+G 
Sbjct: 193 DAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGL 252

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L     MR  GI  ++YTF   L +C +L     G   HA +I+       FVG+A
Sbjct: 253 ESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSA 312

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMYS    I  A+   + M    + +SW A I G+ +N  +EEA+  FS+M R+    
Sbjct: 313 LVDMYSKCRSIKPAETAFRRM-SCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDP 371

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D+FT  S++ +C+ L SL    Q H   + S     + V ++L+  Y KCGS EDA R+F
Sbjct: 372 DDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLF 431

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   D VSW +++  Y+Q GRA++ I LFEKM+ + ++P   TF+ VLSACS +G V+
Sbjct: 432 DEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE 491

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G   F SM K++GI+P + HY+CM+DL  R+G+L+ A  FI  +P+ P A  W  L +A
Sbjct: 492 KGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR   D+++ ++ ++ +LE+DP + A YV L +M+A  G      + R+ M+ +++ KEP
Sbjct: 552 CRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEP 611

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKE 708
           GCSWI+  NK++ F + ++SH     +YEKL+ L  ++ + G+            D +K 
Sbjct: 612 GCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKV 671

Query: 709 DRVLYHSERLAVGFGLISLP 728
             V +HSE+LA+ FGL+ +P
Sbjct: 672 HMVSHHSEKLAIAFGLMFVP 691



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 152/283 (53%), Gaps = 5/283 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C     LE G++ HA I +T    + FV ++LV+MY+KC  IK     
Sbjct: 270 IDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETA 329

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++M   +I S   L+ GY +N   ++A   F  ++ DGID  P+ +T  ++++ C +L+
Sbjct: 330 FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID--PDDFTLGSVISSCANLA 387

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +++EG Q H   +    +    VSNAL+T+Y KCG +EDA  +F+ ++  + +SWTA++ 
Sbjct: 388 SLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVT 447

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG-YMFHAQVIKRGMA 351
           G+ Q G  ++ + L   M    + P+  TF   L++C+       G   FH+     G+ 
Sbjct: 448 GYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIV 507

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             D   T ++D+YS  G + EA++ +K+M     ++ W   ++
Sbjct: 508 PIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/632 (32%), Positives = 343/632 (54%), Gaps = 14/632 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+     + L  G+  H+ + ++    D FV  +LVN Y KCG +     V   MP 
Sbjct: 14  LNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPC 73

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + + N +++ Y+ +    +AF  F ++     + +  T+ ++L  C +   +  GK +
Sbjct: 74  RSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHV 133

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                +  +     V  AL+TMY +C   E+A  VF  + Q+N+I+W+AII  F  HG  
Sbjct: 134 RESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHC 193

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LR   +M+++GI PN  TF   L    +          H  + + G+     +  A+
Sbjct: 194 GEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNAL 253

Query: 361 VDMYSG--LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           V++Y     GE+  A+  L+EM +   + +WN  I G+  + ++ EA+E + ++      
Sbjct: 254 VNVYGRCETGELDVAEVILQEMDEQQIT-AWNVLINGYTLHGRSREALETYQRLQLEAIP 312

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+ T+ S+L AC+   SLA  + IHS  V+   +S+V V ++L   Y+KCGS E+A R+
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  +     VSWN M++AY+Q+G + + + L  KM  EG++    TF++VLS+CSH+GL+
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G + F S+  + GI  +  HY C+VDLLGRAGKL+ A  +IS +P +P    W  L  
Sbjct: 433 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLG 492

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H DL   +  ++++LELDP +++  V LSN+Y+E G   +A + R+ M  + + K 
Sbjct: 493 ACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKV 552

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEK 707
           PG S I+V NK++ F  ++ SH    ++Y+K+++L   + + G+            + +K
Sbjct: 553 PGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMVLHDVDEEQK 612

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           E  + YHSE+LA+ FGLIS P K+     + L
Sbjct: 613 ESLLAYHSEKLAIAFGLISTPEKSSLHIFKNL 644



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 208/423 (49%), Gaps = 15/423 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +L  C   E L+ G+     I++T+   D FV  +L+ MYA+C   ++   V 
Sbjct: 110 DRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVF 169

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ + + ++  +A +    +A  +F  +    + PN  T+ ++L    + S ++
Sbjct: 170 GRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 229

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKC--GMMEDAESVFEGLVQRNVISWTAIING 293
           E  ++H    +      T +SNAL+ +Y +C  G ++ AE + + + ++ + +W  +ING
Sbjct: 230 ELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLING 289

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  HG   + L     ++ + I  ++ TF   L +C S  +   G M H+  ++ G+   
Sbjct: 290 YTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 349

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V  A+ +MYS  G +  A++    M    S+VSWN  +  + ++ ++EE ++   +M 
Sbjct: 350 VIVKNALTNMYSKCGSMENARRIFDSM-PIRSAVSWNGMLQAYAQHGESEEVLKLIRKME 408

Query: 414 RNDAACDEFTYSSILKACSLLPSLAT-CEQIHS----RIVKSKFESNVHVGSSLIEAYNK 468
           +     +  T+ S+L +CS    +A  C+  HS    R ++ K E   H G  L++   +
Sbjct: 409 QEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE---HYG-CLVDLLGR 464

Query: 469 CGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
            G  ++AE+  S++ +  ++V+W S++ A   +    +  +   K++   + P NS+   
Sbjct: 465 AGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLL--ELDPGNSSASV 522

Query: 528 VLS 530
           VLS
Sbjct: 523 VLS 525



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 208/436 (47%), Gaps = 12/436 (2%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V+ N  T+  +L       A+ +GK +H+   + ++     V+ AL+  Y KCG + DA 
Sbjct: 6   VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VF+G+  R+V +W ++I+ +       +   +   M+ +G   +  TF   L +C +  
Sbjct: 66  KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           N   G      + +    L  FVGTA++ MY+       A +    M K  + ++W+A I
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRM-KQKNLITWSAII 184

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
             F  +    EA+  F  M +     +  T+ S+L   +    L    +IH  I +   +
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244

Query: 454 SNVHVGSSLIEAYNKC--GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
               + ++L+  Y +C  G  + AE +  ++    + +WN +I  Y+ +GR+R+A+  ++
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           ++ +E I     TF++VL+AC+ S  + +G+ +  + V E G+  +    + + ++  + 
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-ECGLDSDVIVKNALTNMYSKC 363

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----LKMAEFISKQILELDPDDAAVY 627
           G +E A     ++PI+ +A  W  +  A   H +    LK+   + ++ ++L   +   +
Sbjct: 364 GSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKL---NGITF 419

Query: 628 VTLSNMYAEAGLQADA 643
           V++ +  + AGL A+ 
Sbjct: 420 VSVLSSCSHAGLIAEG 435



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 161/323 (49%), Gaps = 6/323 (1%)

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+  N  TF   L S         G   H+ V +   +L  FV TA+V+ Y+  G + +
Sbjct: 4   EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+K    M    S  +WN+ I+ +  ++++ EA   F +M      CD  T+ SIL AC 
Sbjct: 64  ARKVFDGM-PCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACV 122

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              +L   + +   I ++ FE ++ VG++LI  Y +C S E+A +VF ++   ++++W++
Sbjct: 123 NPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSA 182

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +I A++ +G   +A+  F  M  EGI P   TF+++L+  +    +++  ++   ++ E+
Sbjct: 183 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRI-HLLITEH 241

Query: 553 GILPEEAHYSCMVDLLGR--AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA- 609
           G+       + +V++ GR   G+L++A + +  +  +     W  L      H   + A 
Sbjct: 242 GLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA-WNVLINGYTLHGRSREAL 300

Query: 610 EFISKQILELDPDDAAVYVTLSN 632
           E   +  LE  P D   ++++ N
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLN 323



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 8/239 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +DK   I VL+ C+    L  G+  H+   +  +  D  V  +L NMY+KCG +++   +
Sbjct: 313 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRI 372

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP     S N +L  YA++   ++      K++   V+ N  T+ ++L+ C     I
Sbjct: 373 FDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLI 432

Query: 235 DEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
            EG Q  H+         KT     L+ +  + G +++AE     +  +  +++W +++ 
Sbjct: 433 AEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLG 492

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             + H D ++       + E  +DP   + +V L++  S R    G   +A  ++R MA
Sbjct: 493 ACRVHKDLDRGKLAARKLLE--LDPGNSSASVVLSNIYSER----GDWKNAAKLRRAMA 545


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/573 (34%), Positives = 319/573 (55%), Gaps = 3/573 (0%)

Query: 140 HALITK-TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HAL  K  +   + FV+ +L+NMY K G I     V  +MP+ +  S   ++AGYA    
Sbjct: 140 HALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKC 199

Query: 199 FDQAFSFFLKLDG-IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
             +AF  F ++ G   +  N +  + +L+       +  G Q+H   +K   +   +V N
Sbjct: 200 SQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVEN 259

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+TMY K G M+ A  VFE   +RN I+W+A+I G+ Q+G+ E  +R+   M   G  P
Sbjct: 260 SLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPP 319

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            E+T    L +C+ +     G   H  ++K G  +  +V +A+VDMY+  G I +AK+  
Sbjct: 320 TEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECF 379

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +  +    V W A + G  +N + E+A+  +++M +     +  T +S+L+AC+ L +L
Sbjct: 380 NQFSE-LDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAAL 438

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q+H++I+K  F     VGS+L   Y+KCG+ ED   VF ++   DV++WNS+I  +
Sbjct: 439 EPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGF 498

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           SQNGR   AI LFE+M +EG  P   TF+ VL ACSH GLV  G   F SM+K+YG+ P 
Sbjct: 499 SQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPR 558

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CMVD+L RAG L  A  FI ++ I     +WR +  ACR   D  +  +  ++++
Sbjct: 559 LDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLM 618

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           +L   D+A Y+ LSN+YA      D E  R LMK+  +SK+PGCSW+E+ ++++ F    
Sbjct: 619 DLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGE 678

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDR 710
           + H +   +  +L++L + ++D G+    K  R
Sbjct: 679 QQHPDAEIINTELRRLGKHMKDEGYNPASKYSR 711



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 1/310 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  S    L +G + H L+ K  + G   V  SLV MYAK G + +   V +     +
Sbjct: 226 VLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERN 285

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + + ++ GY++N   + A   F ++      P  +T   +L  C  +  + EGKQ H 
Sbjct: 286 SITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHG 345

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL +  +  V +AL+ MY KCG + DA+  F    + +++ WTA++ G  Q+G++E+
Sbjct: 346 LMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQ 405

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M ++G+ PN  T T  L +CA L     G   H Q++K G  LG  VG+A+  
Sbjct: 406 ALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALST 465

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +     + M      ++WN+ I+GF +N +  +AI  F +M     A D  
Sbjct: 466 MYSKCGNLEDGMVVFRRM-PHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPV 524

Query: 423 TYSSILKACS 432
           T+ ++L ACS
Sbjct: 525 TFINVLCACS 534



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+ CS    L  G++ H L+ K       +V ++LV+MYAKCG I        Q  
Sbjct: 324 LVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFS 383

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
            LDI     ++ G+ +N  F+QA   + ++D   V PN  T +++L  C  L+A++ GKQ
Sbjct: 384 ELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQ 443

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH Q +K  +    +V +AL TMY KCG +ED   VF  +  R+VI+W +II+GF Q+G 
Sbjct: 444 LHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGR 503

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               + L   M+ +G  P+  TF   L +C     SHMG +       R M + D+  T 
Sbjct: 504 GNDAINLFEEMKLEGTAPDPVTFINVLCAC-----SHMGLVDRGWTYFRSM-IKDYGLTP 557

Query: 360 IVDMYSGLGEIWEAKKQLKE 379
            +D Y+ + +I      L E
Sbjct: 558 RLDHYACMVDILSRAGMLSE 577



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 222/500 (44%), Gaps = 58/500 (11%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG--MMEDAESVFEGL--VQRNVISWTAII 291
           +G+ LHA  +K    S   VSN+L+T Y       +  A +VF  +    R+V SW +++
Sbjct: 30  DGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLL 89

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           N    H           ++    I P+ ++F  A  + A   ++  G + HA   K   A
Sbjct: 90  NPLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149

Query: 352 LGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
             + FV TA+++MY  LG I +A+    EM    + VSW A +AG+   + ++EA E F 
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEM-PHRNEVSWAAMVAGYAARKCSQEAFELFR 208

Query: 411 QMVRNDAAC----DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           QM+     C    +EF  +++L A S+   L    Q+H  +VK      V V +SL+  Y
Sbjct: 209 QML---GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMY 265

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K G  + A  VF      + ++W++MI  YSQNG A  A+ +F +M   G  PT  T +
Sbjct: 266 AKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLV 325

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA--------------- 571
            VL+ACS  G + +G++    MVK  G   +    S +VD+  +                
Sbjct: 326 GVLNACSDVGTLMEGKQAHGLMVK-LGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSE 384

Query: 572 ----------------GKLEIALIFISNLP---IKPTAPIWRPLFAACRCHSDLKMAEFI 612
                           G+ E AL+  + +    + P       L  AC   + L+  + +
Sbjct: 385 LDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQL 444

Query: 613 SKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             QIL+      A+V   LS MY++ G   D     + M  +++      +W    N I 
Sbjct: 445 HTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDV-----IAW----NSII 495

Query: 672 RFFSQNKSHSEMPKVYEKLK 691
             FSQN   ++   ++E++K
Sbjct: 496 SGFSQNGRGNDAINLFEEMK 515


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 196/566 (34%), Positives = 317/566 (56%), Gaps = 2/566 (0%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG+  H  + KT +  D  V +SLV MY KC   +  + +  +MP  D+A  N +++ Y 
Sbjct: 124 LGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYY 183

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++  F  A  +F  +     +PN  T +T ++ C  L  ++ G ++H + +   +L  + 
Sbjct: 184 QSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF 243

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           +S+AL+ MY KCG +E A  +FE + ++ V++W ++I+G+   GD    ++L   M  +G
Sbjct: 244 ISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEG 303

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P   T +  +  C+       G   H   I+  +    FV ++++D+Y   G++  A+
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAE 363

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K  K + KS   VSWN  I+G+    K  EA+  FS+M ++    D  T++S+L ACS L
Sbjct: 364 KIFKLIPKS-KVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQL 422

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L   ++IH+ I++ K ++N  V  +L++ Y KCG+ ++A  VF  L   D+VSW SMI
Sbjct: 423 AALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI 482

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY  +G A  A+ LF +M+   ++P    FLA+LSAC H+GLV +G   F  M+  YGI
Sbjct: 483 TAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGI 542

Query: 555 LPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           +P   HYSC++DLLGRAG+L  A  I   N  I+    +   LF+ACR H ++ +   I+
Sbjct: 543 IPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIA 602

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           + +++ DPDD++ Y+ LSNMYA A    +    R  MK   + K PGCSWIE+  KI  F
Sbjct: 603 RTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPF 662

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIED 699
           F ++ SH  +  V++ L  L   +ED
Sbjct: 663 FVEDNSHLHLELVFKCLSYLSDHMED 688



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 253/521 (48%), Gaps = 7/521 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D + ++ +L  C   + L+ G+  H  +    +  D F+  +L+N Y  C        V
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60

Query: 175 VKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLS 232
              M    +I+  N L+AGY KN ++ +A   F KL     ++P+ YTY ++   CG L 
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               GK +H   +K   +    V ++L+ MY KC   E A  +F  + +++V  W  +I+
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + Q G+++  L    LMR  G +PN  T T A++SCA L + + G   H ++I  G  L
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F+ +A+VDMY   G +  A +  ++M K  + V+WN+ I+G+         I+ F +M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKK-TVVAWNSMISGYGLKGDIISCIQLFKRM 299

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                     T SS++  CS    L   + +H   ++++ + +V V SSL++ Y KCG  
Sbjct: 300 YNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E AE++F  +  + VVSWN MI  Y   G+  +A+ LF +M    +     TF +VL+AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S    ++ G+++  +++ E  +   E     ++D+  + G ++ A      LP +     
Sbjct: 420 SQLAALEKGKEI-HNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVS- 477

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS 631
           W  +  A   H     A  +  ++L+  + PD  A    LS
Sbjct: 478 WTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILS 518



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 19/352 (5%)

Query: 97  DDGCSNTVPVTCY--------SLESL-LDKQFVIE--------VLSYCSREECLELGRRY 139
           D  C NTV ++CY        +LE   L ++F  E         +S C+R   L  G   
Sbjct: 171 DVACWNTV-ISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEI 229

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  +  +    D F++++LV+MY KCG ++  + + +QMP   + + N +++GY      
Sbjct: 230 HEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDI 289

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
                 F ++    V+P   T S+++ +C   + + EGK +H  T++ +      V+++L
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSL 349

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + +Y KCG +E AE +F+ + +  V+SW  +I+G+   G   + L L   MR+  ++ + 
Sbjct: 350 MDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDA 409

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            TFT  L +C+ L     G   H  +I++ +   + V  A++DMY+  G + EA    K 
Sbjct: 410 ITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKC 469

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           + K    VSW + I  +  +     A+E F++M++++   D   + +IL AC
Sbjct: 470 LPKR-DLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSAC 520


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 334/616 (54%), Gaps = 13/616 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA I  + +  + F++ SL+N Y  CG +     +    PY ++ S   L++G AKN
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F +A   F ++   + +PN  T S++L    +L  I   K +H   ++  +     V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            AL+ MY K G M  A  +FE + +RNV++W AI++G+  HG  E+ + L  LMR  G+ 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            + YT    + +  S+    +G   H  +I+ G      + TA++D+Y     + +A + 
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLP 435
             EM       +W   + GF   +  + AI+ F++M+   +   D      IL +CS   
Sbjct: 281 FSEM-SVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG 339

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L    ++H+  +K+ F +N+ VGS++I+ Y  CG+ EDA+R F  +   DVV WN+MI 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
               NG    AI LF +M   G+ P  STF++VL ACSH+G+V +G ++F  MVK   ++
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVI 459

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+C++D+LGRAG+L+ A  FI+N+P +P   ++  L  ACR H ++K+   IS++
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           I E++P+DA  YV LSNMYA AG     +  R  ++ K + K+PG S IE+  +IY F +
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMA 579

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGL 724
             K H +  K+   LK L+ +I+  G+           +D+ K+D + +HSE++A+ FGL
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 725 ISLPAKNKFECSRTLE 740
           +    +     ++ L 
Sbjct: 640 MRTKPETIIRITKNLR 655



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 162/345 (46%), Gaps = 3/345 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           + + +  H    +    G+ FV  +LV+MY+K G +     + + M   ++ + N +++G
Sbjct: 138 IRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSG 197

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y+ +   ++A   F  +    +  + YT  +++    S+  +  G  +H   ++  Y + 
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR-LVCLMR 311
             +  AL+ +Y+    ++DA  VF  +  ++V +WT ++ GF     +++ ++    ++ 
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLG 317

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
              +  +       L+SC+       G   HA  IK   A   FVG+A++DMY+  G + 
Sbjct: 318 IQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLE 377

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +AK+    MG+    V WNA IAG   N    +AI+ F QM  +    DE T+ S+L AC
Sbjct: 378 DAKRFFYGMGEK-DVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436

Query: 432 SLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDA 475
           S    +    QI   +VK S    N+   + +I+   + G  + A
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAA 481



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 6/229 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L+D   ++ ++       CL++G   H  I +T    D+ +  +L+++Y     +     
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLS 232
           V  +M   D+A+   +L G++    +D+A   F K+ GI +++ +      +L+ C    
Sbjct: 280 VFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG 339

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+ +G+++HA  +K  + +   V +A++ MY  CG +EDA+  F G+ +++V+ W A+I 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           G   +G     + L   M+  G+DP+E TF   L +C     SH G ++
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC-----SHAGMVY 443



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 4/220 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ +LS CS    L+ GRR HAL  KT    + FV +++++MYA CG+++     
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   D+   N ++AG   N     A   FL++ G  + P+  T+ ++L  C     +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
            EG Q+    +K  ++       A ++ +  + G ++ A S    +  Q +   ++ ++ 
Sbjct: 443 YEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             + HG+ +    +   + E  ++PN+  + V L++  +L
Sbjct: 503 ACRIHGNIKLGHEISQKIFE--MEPNDAGYYVLLSNMYAL 540



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 10/157 (6%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++SIL+    L  L   +QIH++I+ S    N  + +SL+ AY  CG   DA+++F    
Sbjct: 27  HASILRK---LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP 83

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +VVSW  +I   ++N    +AI +F +M++   +P   T  +VL A ++ GL++  + 
Sbjct: 84  YKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKS 143

Query: 544 VFESMVK---EYGILPEEAHYSCMVDLLGRAGKLEIA 577
           V    V+   E  +  E A    +VD+  + G + +A
Sbjct: 144 VHCFWVRGGFEGNVFVETA----LVDMYSKFGCMGVA 176


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 199/609 (32%), Positives = 342/609 (56%), Gaps = 12/609 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H+ +    V  +  +  +++ MYAKC  ++  + V +Q P  D+     +++G+ +
Sbjct: 238 GKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQ 297

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N+   +A +  + ++   + PN++TY+++L    S+ +++ G+Q H++ + +       V
Sbjct: 298 NSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYV 357

Query: 256 SNALLTMYIKCG-MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            NAL+ MY+KC     +    F G+   NVISWT++I GF +HG  E+ ++L   M+  G
Sbjct: 358 GNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAG 417

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + PN +T +  L +C+ +++       H  +IK  + +   VG A+VD Y+G G   EA 
Sbjct: 418 VQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAW 477

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
             +  M      +++    A   +    E A+   + M  ++   DEF+ +S + A + L
Sbjct: 478 SVIGMMNHR-DIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGL 536

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             + T +Q+H    KS FE    V +SL+ +Y+KCGS  DA RVF  +T  D VSWN +I
Sbjct: 537 GIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLI 596

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              + NG    A+  F+ M + G++P + TFL+++ ACS   L+  G   F SM K Y I
Sbjct: 597 SGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHI 656

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P+  HY C+VDLLGR G+LE A+  I  +P KP + I++ L  AC  H ++ + E +++
Sbjct: 657 TPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMAR 716

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           + LELDP D A+Y+ L+++Y  AGL    ++ RKLM+ + + + P   W+EV +KIY F 
Sbjct: 717 RCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLFS 776

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPA----- 729
           ++ K  ++  ++ EKL+ L+ +I++ G+   E ED+ LYHSE+LA+ FG++S+P      
Sbjct: 777 AREKIGND--EINEKLESLITEIKNRGYPYQESEDK-LYHSEQLALAFGVLSVPTLAPIR 833

Query: 730 --KNKFECS 736
             KN   C+
Sbjct: 834 INKNSLICT 842



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 226/437 (51%), Gaps = 6/437 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++  ++VLS C+  + L+ G   H+ I K  +  D +++ +L+ +YAKC  +     +  
Sbjct: 17  RETCLQVLSLCN-SQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFD 75

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +MP+ D+ S   LL+ + +N    +A   F  + G    PN +T S+ L  C +L   + 
Sbjct: 76  EMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEF 135

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G ++HA  +KL       +   L+ +Y KC    +   +   +   +V+SWT +I+   +
Sbjct: 136 GAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGD 354
              + + L+L   M E GI PNE+TF V L    S      GY  + H+Q+I  G+ +  
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTF-VKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNL 254

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            + TAI+ MY+    + +A K  ++  K    + W + I+GF +N +  EA+ A   M  
Sbjct: 255 MLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCL-WTSIISGFVQNSQVREAVNALVDMEL 313

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG-SWE 473
           +    + FTY+S+L A S + SL   EQ HSR++    E +++VG++L++ Y KC  +  
Sbjct: 314 SGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTT 373

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +  + F  +   +V+SW S+I  ++++G   +++ LF +M   G++P + T   +L ACS
Sbjct: 374 NGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACS 433

Query: 534 HSGLVQDGQKVFESMVK 550
               +   +K+   ++K
Sbjct: 434 KMKSIIQTKKLHGYIIK 450



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 111/217 (51%), Gaps = 1/217 (0%)

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H+ +IK G+    ++   ++ +Y+    + +A+    EM      VSW   ++   
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM-PHRDVVSWTTLLSAHT 93

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           RN+   EA++ F  M+ +    +EFT SS L++CS L       +IH+ +VK   E N  
Sbjct: 94  RNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHV 153

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           +G++L++ Y KC    +  ++ + +   DVVSW +MI +  +  +  +A+ L+ KM+  G
Sbjct: 154 LGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAG 213

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           I P   TF+ +L   S  GL +   KV  S +  +G+
Sbjct: 214 IYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGV 250



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 2/221 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS+ + +   ++ H  I KT V  D  V  +LV+ YA  G      +V+  M + D
Sbjct: 428 ILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRD 487

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I +   L A   +    + A      +   +V+ + ++ ++ ++    L  ++ GKQLH 
Sbjct: 488 IITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHC 547

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            + K  +    +VSN+L+  Y KCG M DA  VF+ + + + +SW  +I+G   +G    
Sbjct: 548 YSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISD 607

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCA--SLRNSHMGYMF 341
            L     MR  G+ P+  TF   + +C+  SL N  + Y +
Sbjct: 608 ALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFY 648



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 5/204 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +E G++ H    K+       V+ SLV+ Y+KCG ++    V K +   D  S N L++G
Sbjct: 539 METGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISG 598

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS- 251
            A N L   A S F  +    V+P+  T+ +++  C   S +++G        K  +++ 
Sbjct: 599 LASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITP 658

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE--KPLRLVC 308
           K      L+ +  + G +E+A  V E +  + + + +  ++N    HG+    + +   C
Sbjct: 659 KLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRC 718

Query: 309 LMREDGIDPNEYTFTVALASCASL 332
           L   D  DP  Y    +L   A L
Sbjct: 719 L-ELDPCDPAIYLLLASLYDNAGL 741


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 216/625 (34%), Positives = 349/625 (55%), Gaps = 18/625 (2%)

Query: 132 CLEL--GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           CL L  G + H  + K     D +V ASL+++Y++ G ++    V   MP  D+ S N +
Sbjct: 160 CLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAM 219

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G+ +N    +A     ++   +V+ +  T S+ML IC   + +  G  +H   +K   
Sbjct: 220 ISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGL 279

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            S   VSNAL+ MY K G ++DA+ VF+G+  R+++SW +II  ++Q+ D    L     
Sbjct: 280 ESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKE 339

Query: 310 MREDGIDPNEYTFTVALASC-ASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIVDMYSGL 367
           M   G+ P+  T  V+LAS    L +  +G   H  V++ R + +   +G A+V+MY+ L
Sbjct: 340 MLFVGMRPDLLT-VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKL 398

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSS 426
           G I +  + + E   S   +SWN  I G+ +N    EAI+A++ M        ++ T+ S
Sbjct: 399 GSI-DCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVS 457

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL A S + +L    +IH R++K+    +V V + LI+ Y KCG  EDA  +F ++    
Sbjct: 458 ILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQET 517

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V WN++I +   +G   KA+ LF+ M  +G++  + TF+++LSACSHSGLV + Q  F+
Sbjct: 518 SVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFD 577

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +M KEY I P   HY CMVDL GRAG LE A   +SN+PI+  A IW  L AACR H + 
Sbjct: 578 TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNA 637

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++  F S ++LE+D ++   YV LSN+YA  G    A + R L + + + K PG S + V
Sbjct: 638 ELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVV 697

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHS 715
            + +  F++ N+SH +  ++YE+L+ L  +++ +G+            ++EKE+ +  HS
Sbjct: 698 GSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHS 757

Query: 716 ERLAVGFGLISLPAKNKFECSRTLE 740
           ERLA+ FG+IS P K+     + L 
Sbjct: 758 ERLAIVFGIISTPPKSPIRIFKNLR 782



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 273/540 (50%), Gaps = 20/540 (3%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           + + ++ HAL+       D  +   LV +YA  GD+       K +   +I S N +++ 
Sbjct: 64  INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123

Query: 193 YAKNALFDQAF---SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           Y +   +  +    +  L L G  V+P+ YT+  +L  C SL+   +G+++H   +K+ +
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSG--VRPDFYTFPPVLKACLSLA---DGEKMHCWVLKMGF 178

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                V+ +L+ +Y + G +E A  VF  +  R+V SW A+I+GF Q+G+  + LR++  
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M+ + +  +  T +  L  CA   +   G + H  VIK G+    FV  A+++MYS  G 
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A++    M +    VSWN+ IA + +N     A+  F +M+      D  T  S+  
Sbjct: 299 LQDAQRVFDGM-EVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357

Query: 430 ACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
               L        +H  +V+ ++ E ++ +G++L+  Y K GS + A  VF QL + DV+
Sbjct: 358 IFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVI 417

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           SWN++I  Y+QNG A +AI  +  M+ EG  I P   T++++L A SH G +Q G K+  
Sbjct: 418 SWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHG 476

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            ++K    L +    +C++D+ G+ G+LE A+     +P + + P W  + ++   H   
Sbjct: 477 RLIKNCLFL-DVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGHG 534

Query: 607 KMAEFISKQI-LELDPDDAAVYVTLSNMYAEAGLQADAE----EQRKLMKMKEISKEPGC 661
           + A  + K +  +    D   +V+L +  + +GL  +A+      +K  ++K   K  GC
Sbjct: 535 EKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGC 594



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 178/360 (49%), Gaps = 11/360 (3%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S + I+  KQLHA  + L       +   L+T+Y   G +  + + F+ + ++N+ SW +
Sbjct: 60  SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119

Query: 290 IINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           +++ + + G Y   +  V  L+   G+ P+ YTF   L +C SL +   G   H  V+K 
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKM 176

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G     +V  +++ +YS  G +  A K   +M       SWNA I+GF +N    EA+  
Sbjct: 177 GFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVG-SWNAMISGFCQNGNVAEALRV 235

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             +M   +   D  T SS+L  C+    +     +H  ++K   ES+V V ++LI  Y+K
Sbjct: 236 LDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSK 295

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G  +DA+RVF  +   D+VSWNS+I AY QN     A+  F++M+  G+RP     L V
Sbjct: 296 FGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRP---DLLTV 352

Query: 529 LSACSHSGLVQD---GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +S  S  G + D   G+ V   +V+   +  +    + +V++  + G ++ A      LP
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 193/398 (48%), Gaps = 9/398 (2%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E  +D   V  +L  C++   +  G   H  + K  +  D FV+ +L+NMY+K G ++  
Sbjct: 243 EVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDA 302

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V   M   D+ S N ++A Y +N     A  FF ++  + ++P+  T  ++ +I G L
Sbjct: 303 QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362

Query: 232 SAIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           S    G+ +H   ++ ++L     + NAL+ MY K G ++ A +VFE L  R+VISW  +
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422

Query: 291 INGFKQHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I G+ Q+G   + +    +M E   I PN+ T+   L + + +     G   H ++IK  
Sbjct: 423 ITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNC 482

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           + L  FV T ++DMY   G + +A     E+ +  +SV WNA I+    +   E+A++ F
Sbjct: 483 LFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQE-TSVPWNAIISSLGIHGHGEKALQLF 541

Query: 410 SQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
             M  +    D  T+ S+L ACS   L+     C     +  + + + N+     +++ +
Sbjct: 542 KDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQK--EYRIKPNLKHYGCMVDLF 599

Query: 467 NKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRA 503
            + G  E A  + S +   AD   W +++ A   +G A
Sbjct: 600 GRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNA 637


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 208/642 (32%), Positives = 341/642 (53%), Gaps = 25/642 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ V   CS    L LGR  H  + +  +  +  +  SL+ MY K GD+ S   + 
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +P    A    +++ Y ++  F +A + F K+    ++PN  T   +L  C  L  + 
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319

Query: 236 EGKQLHAQTMK------LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           EG+ +H   ++      L +L       AL+ +Y   G + D   VFE + ++ ++SW  
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGP-----ALMELYADTGNLRDCHKVFETIKEKTILSWNT 374

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+ F ++G  E+ L L   M+  G+ P+ Y+   +L++C ++  S +G   H  +IK G
Sbjct: 375 LISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG 434

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
               DFV  A++DMY+  G +  A K  +++ K  S V+WN+ I GF +N  + EAI  F
Sbjct: 435 -NFNDFVQNALIDMYAKCGFVHSANKMFEKI-KEKSLVTWNSMICGFSQNGYSVEAITLF 492

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM  N    D+ T+ S+++ACS L  L   + +H +++      + ++ ++L + Y+KC
Sbjct: 493 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 552

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  + A  VF +++   +VSW+ MI  Y  +G+    I LF +M+  GI+P + TF+ +L
Sbjct: 553 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 612

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH+G V++G+  F SM  E+G+ P+  H++CMVDLL RAG L  A   I++LP    
Sbjct: 613 SACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPAN 671

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           + IW  L   CR H  + + + I K +L++D  D   Y  LSN+YAE G      + R +
Sbjct: 672 SSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSM 731

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY---EKLKQLMQ-QIED------ 699
           MK K + K PG S IE+  KIYRF   + SHS+   +Y   E  + L+  Q+ D      
Sbjct: 732 MKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNS 791

Query: 700 -IGHTDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +G +   KE+ V+ HSE+LA+ FG+I+         S+ L 
Sbjct: 792 IVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLR 833



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 262/542 (48%), Gaps = 14/542 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L +G + H  + K     D  V  SL+ MY +   +         MP  D
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRD 165

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + + ++  + +N    +    F ++    V+P+  T  ++   C  L ++  G+ +H 
Sbjct: 166 VVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHG 225

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +  S  +++N+L+ MY K G +  AE +FE +  R    WT +I+ + Q G +++
Sbjct: 226 YVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG-DFVGTAIV 361
            L +   M+E  ++PN+ T    L +CA L     G   H  VI+R M    DF+G A++
Sbjct: 286 ALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALM 345

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           ++Y+  G + +  K  + + K  + +SWN  I+ F RN + EEA+  F QM       D 
Sbjct: 346 ELYADTGNLRDCHKVFETI-KEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDS 404

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           ++ +S L AC  +       QIH  I+K+    N  V ++LI+ Y KCG    A ++F +
Sbjct: 405 YSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEK 463

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +    +V+WNSMI  +SQNG + +AI LF++M +  ++    TFL+V+ ACSH G ++ G
Sbjct: 464 IKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKG 523

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           + V   ++  YG+  +    + + D+  + G+L++A      +  +     W  + A   
Sbjct: 524 KWVHHKLIM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVS-WSVMIAGYG 581

Query: 602 CHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM--KMKEISK 657
            H  +     +  Q+L   + P+D      LS     A   A A E+ KL    M E   
Sbjct: 582 MHGQINATISLFNQMLGSGIKPNDITFMHILS-----ACSHAGAVEEGKLYFNSMSEFGV 636

Query: 658 EP 659
           EP
Sbjct: 637 EP 638



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/413 (23%), Positives = 201/413 (48%), Gaps = 3/413 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA +  T +      +  L+  YA+ G  +S   V    P  D      L+  Y     F
Sbjct: 21  HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFF 80

Query: 200 DQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           ++A S + ++   D  Q +++ + ++L  C     +  G ++H + +K  + S   V  +
Sbjct: 81  EEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETS 140

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           LL MY +   ++DA   F+ +  R+V++W++I+  F Q+G   + L +   M  + ++P+
Sbjct: 141 LLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPD 200

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
             T      +C+ L +  +G   H  V++R +     +  +++ MY  LG+++ A++ L 
Sbjct: 201 SVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER-LF 259

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E      +  W   I+ + ++   +EA+  F++M       ++ T   +L AC+ L  + 
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319

Query: 439 TCEQIHSRIVKSKFESNVH-VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               +H  +++   +  +  +G +L+E Y   G+  D  +VF  +    ++SWN++I  +
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIF 379

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           ++NG+  +A++LF +M  +G+ P + +  + LSAC      Q G ++   ++K
Sbjct: 380 TRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/492 (24%), Positives = 211/492 (42%), Gaps = 55/492 (11%)

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           QLHA             S  L+  Y + G+ E ++ VF+   + +   W  +I  +   G
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78

Query: 299 DYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            +E+ + L   ++ +D    + + F   L +C+   +  +G   H +VIK G      V 
Sbjct: 79  FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           T+++ MY  +  + +A K    M      V+W++ +  F +N +  E ++ FSQM+    
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTM-PIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S+ +ACS L SL     +H  +V+ + ESN  + +SLI  Y K G    AER
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F  +       W  MI  Y+Q+G  ++A+ +F KM    + P   T + VL AC+  G 
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGR 317

Query: 538 VQDGQ------------------------------------KVFESMVKEYGILPEEAHY 561
           V++G+                                    KVFE+ +KE  IL     +
Sbjct: 318 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFET-IKEKTILS----W 372

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIK---PTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
           + ++ +  R G+ E AL+    +  +   P +       +AC   S  ++   I   I++
Sbjct: 373 NTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
               +  V   L +MYA+ G    A   +   K+KE S       +  +N +   FSQN 
Sbjct: 433 TGNFNDFVQNALIDMYAKCGFVHSA--NKMFEKIKEKS-------LVTWNSMICGFSQNG 483

Query: 679 SHSEMPKVYEKL 690
              E   +++++
Sbjct: 484 YSVEAITLFDQM 495



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 23/253 (9%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           +SA ++F K  +++ ++ + +I          G S+NGYS    +  D          + 
Sbjct: 455 HSANKMFEKIKEKSLVTWNSMIC---------GFSQNGYSVEAITLFD---------QMY 496

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           + C  +    DK   + V+  CS    LE G+  H  +    +  D ++  +L +MY+KC
Sbjct: 497 MNCVKM----DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 552

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G+++    V  +M    I S + ++AGY  +   +   S F ++ G  ++PN  T+  +L
Sbjct: 553 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 612

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNV 284
           + C    A++EGK       +     K      ++ +  + G +  A  +   L    N 
Sbjct: 613 SACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS 672

Query: 285 ISWTAIINGFKQH 297
             W A++NG + H
Sbjct: 673 SIWGALLNGCRIH 685



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 7/264 (2%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y  + + C+   +  T  Q+H+ +  +    +    + LIE+Y + G +E ++RVF    
Sbjct: 4   YMPLFRRCA---TSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQ 542
             D   W  +IK Y   G   +A+ L+ +MV +   + +N  F +VL ACS  G +  G 
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           KV   ++K  G   +    + ++ + G    L+ A      +PI+        +    + 
Sbjct: 121 KVHGRVIK-CGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN 179

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC- 661
               +  +  S+ I E    D+   ++++   +E G           +  +EI       
Sbjct: 180 GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLN 239

Query: 662 -SWIEVYNKIYRFFSQNKSHSEMP 684
            S I +Y K+   +S  +    +P
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVP 263


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 195/617 (31%), Positives = 334/617 (54%), Gaps = 15/617 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA +    +    F+   L++  +  GDI     V   +P   I   N ++ GY++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F  A   +  +    V P+ +T+  +L  C  LS +  G+ +HAQ  +L + +   V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 257 NALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           N L+ +Y KC  +  A +VFEGL   +R ++SWTAI++ + Q+G+  + L +   MR+  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+       L +   L++   G   HA V+K G+ +   +  ++  MY+  G++  AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               +M KS + + WNA I+G+ +N    EAI+ F +M+  D   D  + +S + AC+ +
Sbjct: 278 ILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            SL     ++  + +S +  +V + S+LI+ + KCGS E A  VF +    DVV W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +GRAR+AI L+  M   G+ P + TFL +L AC+HSG+V++G   F  M  ++ I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKI 455

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P++ HY+C++DLLGRAG L+ A   I  +P++P   +W  L +AC+ H  +++ E+ ++
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           Q+  +DP +   YV LSN+YA A L     E R  MK K ++K+ GCSW+EV  ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
             +KSH    ++  +++ +  ++++ G             D E E+ +  HSER+A+ +G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635

Query: 724 LISLPAKNKFECSRTLE 740
           LIS P       ++ L 
Sbjct: 636 LISTPQGTPLRITKNLR 652



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 4/378 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  CS    L++GR  HA + +     D FV   L+ +YAKC  + S   V + +P  
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183

Query: 182 D--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           +  I S   +++ YA+N    +A   F ++  +DV+P+     ++L     L  + +G+ 
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  +K+    +  +  +L TMY KCG +  A+ +F+ +   N+I W A+I+G+ ++G 
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + +   M    + P+  + T A+++CA + +       +  V +       F+ +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DM++  G + E  + + +       V W+A I G+  + +  EAI  +  M R     
Sbjct: 364 LIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           ++ T+  +L AC+    +       +R+   K        + +I+   + G  + A  V 
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 480 SQL-TAADVVSWNSMIKA 496
             +     V  W +++ A
Sbjct: 483 KCMPVQPGVTVWGALLSA 500



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 143/297 (48%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+  +  + L+ GR  HA + K  +  +  +  SL  MYAKCG + +   +  +M 
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +++GYAKN    +A   F ++   DV+P+  + ++ ++ C  + ++++ + 
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           ++    +  Y     +S+AL+ M+ KCG +E A  VF+  + R+V+ W+A+I G+  HG 
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + L   M   G+ PN+ TF   L +C        G+ F  ++    +         
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC 464

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           ++D+    G + +A + +K M        W A ++   +++  E    A  Q+   D
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           A  +QIH+R++    + +  + + LI A +  G    A +VF  L    +  WN++I+ Y
Sbjct: 35  AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK------- 550
           S+N   + A++++  M +  + P + TF  +L ACS    +Q G+ V   + +       
Sbjct: 95  SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154

Query: 551 --EYGI---------------------LPEEA--HYSCMVDLLGRAGKLEIALIFISNLP 585
             + G+                     LPE     ++ +V    + G+   AL   S + 
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214

Query: 586 IKPTAPIWRPLFA---ACRCHSDLKMAEFISKQI----LELDPDDAAVYVTLSNMYAEAG 638
                P W  L +   A  C  DLK    I   +    LE++PD   + ++L+ MYA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD---LLISLNTMYAKCG 271

Query: 639 LQADAE 644
             A A+
Sbjct: 272 QVATAK 277


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 212/666 (31%), Positives = 349/666 (52%), Gaps = 64/666 (9%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C    C EL  +   L  K    GD  V  +LV+M+ +CG +     +  Q+    I   
Sbjct: 138 CGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCR 197

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDV-------------------------------Q 215
           N +LAGYAK    D A  +F  +   DV                               +
Sbjct: 198 NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +  TY++ L  C  L ++  GKQLHA+ ++        V++AL+ +Y KCG  ++A+ V
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  L  RN +SWT +I G  Q+  + K + L   MR + +  +++     ++ C +  + 
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377

Query: 336 HMGYMFHAQVIKRG------------------------------MALGDFVG-TAIVDMY 364
            +G   H+  +K G                              M+  D V  T+++  Y
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEFT 423
           S +G I +A++    M  + ++++WNA +  + ++   E+ ++ +S M+ + D   D  T
Sbjct: 438 SQIGNIIKAREFFDGMA-TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVT 496

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y ++ + C+ + +    +QI    VK+    NV V ++ I  Y+KCG   +A+++F  L 
Sbjct: 497 YVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 556

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             DVVSWN+MI  YSQ+G  ++A   F+ M+ +G +P   +++AVLS CSHSGLVQ+G+ 
Sbjct: 557 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKL 616

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            F+ M + +GI P   H+SCMVDLLGRAG L  A   I  +P+KPTA +W  L +AC+ H
Sbjct: 617 YFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIH 676

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            + ++AE  +K + ELD  D+  Y+ L+ +Y++AG   D+ + RKLM+ K I K PG SW
Sbjct: 677 GNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSW 736

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFG 723
           +EV NK++ F + + SH ++  +  K+ +LM++I  +G+   E     ++HSE+LAV FG
Sbjct: 737 MEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTESPRSEIHHSEKLAVAFG 796

Query: 724 LISLPA 729
           ++SLPA
Sbjct: 797 IMSLPA 802



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 197/417 (47%), Gaps = 25/417 (5%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA-------------LFDQAFS 204
           ++N YAK G +     +  +MP  D+AS N L++  ++ A             L  Q   
Sbjct: 93  MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLG 152

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F K D             M   CG    +D   +L +Q  +     +    N++L  Y 
Sbjct: 153 LFWKFDFWGDPDVETALVDMFVRCGY---VDFASRLFSQIERPTIFCR----NSMLAGYA 205

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           K   ++ A   FE + +R+V+SW  +I    Q G   + L LV  M   G+  +  T+T 
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           +L +CA L +   G   HA+VI+    +  +V +A++++Y+  G   EAK+    + +  
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDR 324

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           +SVSW   I G  + +   +++E F+QM     A D+F  ++++  C     L    Q+H
Sbjct: 325 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 384

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           S  +KS     + V +SLI  Y KCG  ++AE VFS ++  D+VSW SMI AYSQ G   
Sbjct: 385 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 444

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           KA   F+ M          T+ A+L A    G  +DG K++ +M+ +  + P+   Y
Sbjct: 445 KAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 211/498 (42%), Gaps = 82/498 (16%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD       L+ C+R   L  G++ HA + ++    D +V ++L+ +YAKCG  K    V
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +   +  S   L+ G  +   F ++   F ++    +  + +  +T+++ C +   +
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV------------------- 275
             G+QLH+  +K  +     VSN+L+++Y KCG +++AE V                   
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437

Query: 276 ------------FEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYTF 322
                       F+G+  RN I+W A++  + QHG  E  L++   ++ +  + P+  T+
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTY 497

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
                 CA +  + +G       +K G+ L   V  A + MYS  G I EA+K L ++  
Sbjct: 498 VTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK-LFDLLN 556

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               VSWNA I G+ ++   ++A + F  M+   A  D  +Y ++L  CS          
Sbjct: 557 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCS---------- 606

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-----WNSMIKAY 497
            HS +V                        ++ +  F  +T    +S     ++ M+   
Sbjct: 607 -HSGLV------------------------QEGKLYFDMMTRVHGISPGLEHFSCMVDLL 641

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL-- 555
            + G   +A  L +KM    ++PT   + A+LSAC     +    ++ E   K    L  
Sbjct: 642 GRAGHLTEAKDLIDKMP---MKPTAEVWGALLSACK----IHGNDELAELAAKHVFELDS 694

Query: 556 PEEAHYSCMVDLLGRAGK 573
           P+   Y  +  +   AGK
Sbjct: 695 PDSGSYMLLAKIYSDAGK 712



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 187/465 (40%), Gaps = 93/465 (20%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVIS 286
           CGS  A+   + LH + + +   S   + N LL  Y+ CG + DA  +    ++  NVI+
Sbjct: 30  CGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVIT 89

Query: 287 WTAIINGFKQHG---DYEK-----PLRLVC---LMREDGIDPNEYTFTVALASCASLRNS 335
              ++NG+ + G   D E+     P R V     +  D   P     +     C  L   
Sbjct: 90  HNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQ 149

Query: 336 HMGYMFHAQVIKRGMALGDFVG-----TAIVDMYSGLGEIWEAKKQLKEMGKSA------ 384
            +G  +            DF G     TA+VDM+   G +  A +   ++ +        
Sbjct: 150 LLGLFWKF----------DFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNS 199

Query: 385 ------------------------SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
                                     VSWN  IA   ++ +  EA+    +M R     D
Sbjct: 200 MLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLD 259

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             TY+S L AC+ L SL   +Q+H+++++S  + + +V S+LIE Y KCGS+++A+RVF+
Sbjct: 260 STTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFN 319

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            L   + VSW  +I    Q     K++ LF +M  E +         ++S C        
Sbjct: 320 SLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-------- 371

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
               F  M      L  + H  C+     RA       I +SN  I         L+A C
Sbjct: 372 ----FNRMDL---CLGRQLHSLCLKSGHNRA-------IVVSNSLIS--------LYAKC 409

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
               DL+ AEF+   + E    D   + ++   Y++ G    A E
Sbjct: 410 ---GDLQNAEFVFSSMSE---RDIVSWTSMITAYSQIGNIIKARE 448



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 127/292 (43%), Gaps = 42/292 (14%)

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           AL SC S          H +++  G+A   F+   ++  Y   G + +A++ L+   K  
Sbjct: 26  ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 85

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC------DEFTYSSILKACSLLPSLA 438
           + ++ N  + G+ +     +A E F +M R D A       D    +    +C  L    
Sbjct: 86  NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRE 145

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ----------------- 481
              Q+     K  F  +  V ++L++ + +CG  + A R+FSQ                 
Sbjct: 146 LAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYA 205

Query: 482 --------------LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
                         +   DVVSWN MI A SQ+GR R+A+ L  +M  +G+R  ++T+ +
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIA 577
            L+AC+    +  G+++   +++    LP+   Y  S +++L  + G  + A
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRS---LPQIDPYVASALIELYAKCGSFKEA 314


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 211/622 (33%), Positives = 342/622 (54%), Gaps = 16/622 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ GR+ H L+ K     D ++ AS ++ Y++ G +     +   M   DI + N +++G
Sbjct: 155 LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISG 214

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           +  N    +A   F ++    V  +  T S++L IC  L  I  G  +H   +KL     
Sbjct: 215 FYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY K G +  AE++F  +  R+++SW +++  F+Q+      L +   M  
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHS 334

Query: 313 DGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
            G+ P+  T  V+LAS A+ L N       H  V +R   L D  +G AI+DMY+ LG I
Sbjct: 335 IGVVPDLLTL-VSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFI 393

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILK 429
             A+K  + +      +SWN+ I G+ +N    EAI+ +S M   + A  ++ T+ SIL 
Sbjct: 394 DSARKVFEGL-PVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILT 452

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A S L +L    + H +++K+    ++ V + L++ Y KCG   DA  +F ++     VS
Sbjct: 453 AHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS 512

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I  +  +G   KA+ LF++M  EG++P + TF+++LSACSHSGLV +GQ  F+ M 
Sbjct: 513 WNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQ 572

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           + YGI P   HY CMVDL GRAG LE A  F+ N+P++P   +W  L  ACR H ++++ 
Sbjct: 573 ETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELV 632

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             +S  +L+++ ++   YV LSN+YA+ G     +E R L + + + K PG S IEV  K
Sbjct: 633 RTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKK 692

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
           I  F++ N++H +  ++Y +L+ L  +++ IG+            D+EKE+ +  HSERL
Sbjct: 693 IDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERL 752

Query: 719 AVGFGLISLPAKNKFECSRTLE 740
           A+ FG+IS P K   +  + L 
Sbjct: 753 AMAFGIISTPPKTTLQIFKNLR 774



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 271/548 (49%), Gaps = 17/548 (3%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +  YC++   + L ++ HAL+  +      F++A L+N YA  GDI        Q+   
Sbjct: 48  RIFLYCTK---VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK 104

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           D+ + N +++ YA+   F  A   F + L    +Q +HYT+  ++  CG+L   D+G+++
Sbjct: 105 DVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNL---DDGRKV 161

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +KL +     ++ + +  Y + G +  A ++F+ ++ R++ +W A+I+GF  +G  
Sbjct: 162 HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKV 221

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L +   MR   +  +  T +  L  C  L +   G + H   IK G+    FV  A+
Sbjct: 222 AEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           ++MY+  GE+  A+    +M K    VSWN+ +A F +N+K   A+  +++M       D
Sbjct: 282 INMYAKFGELRSAETIFNQM-KVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPD 340

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVF 479
             T  S+    + L +  +   IH  + +   F  ++ +G+++I+ Y K G  + A +VF
Sbjct: 341 LLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVF 400

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLV 538
             L   DV+SWNS+I  YSQNG A +AI ++  M    G  P   T++++L+A S  G +
Sbjct: 401 EGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGAL 460

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G K    ++K + +  +    +C+VD+ G+ GKL  AL     +P + +   W  + +
Sbjct: 461 KQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVS-WNAIIS 518

Query: 599 ACRCHS-DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK----MK 653
               H   LK  +   +   E    D   +V+L +  + +GL  + +   +LM+    ++
Sbjct: 519 CHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIR 578

Query: 654 EISKEPGC 661
              K  GC
Sbjct: 579 PSLKHYGC 586



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 95/184 (51%), Gaps = 4/184 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+  S+   L+ G + H  + K  +  D FV+  LV+MY KCG +   +++  ++P+
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH 507

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
               S N +++ +  +    +A   F ++    V+P+H T+ ++L+ C     +DEG Q 
Sbjct: 508 QSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEG-QW 566

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             Q M+  Y  + ++ +   ++ ++ + G +E A +  + + V+ +V  W A++   + H
Sbjct: 567 CFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH 626

Query: 298 GDYE 301
            + E
Sbjct: 627 ENVE 630



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 118/310 (38%), Gaps = 54/310 (17%)

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           E  ++ I   C+    +   +Q+H+ +V S    ++ + + LI  Y   G    A   F 
Sbjct: 43  EIDFNRIFLYCT---KVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFD 99

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILF-EKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           Q+   DV +WNSMI AY++ G    A+  F E +    ++  + TF  V+ AC   G + 
Sbjct: 100 QIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLD 156

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           DG+KV   +V + G   +    +  +    R G + +A     N+ I+     W  + + 
Sbjct: 157 DGRKV-HCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGT-WNAMISG 214

Query: 600 -----------------------------------CRCHSDLKMAEFISKQILELDPD-D 623
                                              C    D+     I    ++L  + D
Sbjct: 215 FYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFD 274

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
             V   L NMYA+ G    AE     MK+++I      SW    N +   F QNK     
Sbjct: 275 LFVCNALINMYAKFGELRSAETIFNQMKVRDI-----VSW----NSLLAAFEQNKKPVIA 325

Query: 684 PKVYEKLKQL 693
             VY K+  +
Sbjct: 326 LGVYNKMHSI 335


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 196/589 (33%), Positives = 318/589 (53%), Gaps = 47/589 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F   +L++ YAK G I+++ A   +MP+ D  S N  +AG++ N+   ++   F ++ 
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +P  YT  ++L     LS +  GKQ+H   +   +L    + NAL  MY KCG +E
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F+ L ++N++SW  +I+G+ ++G  EK + L+  MR  G  P++ T +  +A+  
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                            Y   G + EA++   E  K    V W 
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEF-KEKDIVCWT 291

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A + G+ +N + E+A+  F++M+      D +T SS++ +C+ L SL   + +H + + +
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              +N+ V S+LI+ Y+KCG  +DA  VF+ +   +VVSWN+MI   +QNG  + A+ LF
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E M+ +  +P N TF+ +LSAC H   ++ GQ+ F+S+  ++G+ P   HY+CMV+LLGR
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGR 471

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
            G++E A+  I N+   P   IW  L + C    D+  AE  ++ + ELDP  A  Y+ L
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SNMYA  G   D    R LMK K + K  G SWIE+ N+++RF S++++H E   +YEKL
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKL 591

Query: 691 KQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
             L+ ++++ G T N           EK   + +HSE+LA+ FGLI  P
Sbjct: 592 NMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 36/312 (11%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L+  ++   L  G++ H  I      G+ F+  +L +MYAKCG+I+    +   + 
Sbjct: 158 IVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLT 217

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N +++GYAKN   ++      ++      P+  T ST++A             
Sbjct: 218 KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA------------- 264

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
                                  Y +CG +++A  VF    +++++ WTA++ G+ ++G 
Sbjct: 265 ----------------------AYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  L L   M  + I+P+ YT +  ++SCA L + H G   H + I  G+     V +A
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMYS  G I +A+     M  + + VSWNA I G  +N   ++A+E F  M++     
Sbjct: 363 LIDMYSKCGFIDDARSVFNLM-PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421

Query: 420 DEFTYSSILKAC 431
           D  T+  IL AC
Sbjct: 422 DNVTFIGILSAC 433



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 85/179 (47%), Gaps = 2/179 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C++   L  G+  H       +  +  V+++L++MY+KCG I    +V   MP  +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ G A+N     A   F  +     +P++ T+  +L+ C   + I++G++   
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGD 299
                  ++ T    A ++ +  + G +E A ++ + +    + + W+ +++     GD
Sbjct: 448 SITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGD 506


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 223/648 (34%), Positives = 357/648 (55%), Gaps = 54/648 (8%)

Query: 130 EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK-------------------- 169
           E  L  G+  HAL  K+ V    +++   VN+Y+KCG +                     
Sbjct: 21  ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI 80

Query: 170 -------SMVAVVKQM----PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
                  S + + +Q+    P  D  S N L++GYA       A   F ++  +  + + 
Sbjct: 81  VKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDG 140

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           +T S ++A C     +D  KQLH  ++   + S ++V+NA +T Y K G++ +A SVF G
Sbjct: 141 FTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198

Query: 279 LVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           + + R+ +SW ++I  + QH +  K L L   M   G   + +T    L +  SL +   
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYS---GLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           G  FH ++IK G      VG+ ++D YS   G   +++++K  +E+  S   V WN  I+
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMIS 317

Query: 395 GFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           G+  N++ +EEA+++F QM R     D+ ++  +  ACS L S + C+QIH   +KS   
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377

Query: 454 SN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           SN + V ++LI  Y K G+ +DA  VF ++   + VS+N MIK Y+Q+G   +A++L+++
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+  GI P   TF+AVLSAC+H G V +GQ+ F +M + + I PE  HYSCM+DLLGRAG
Sbjct: 438 MLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
           KLE A  FI  +P KP +  W  L  ACR H ++ +AE  + +++ + P  A  YV L+N
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLAN 557

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MYA+A    +    RK M+ K I K+PGCSWIEV  K + F +++ SH  + +V E L++
Sbjct: 558 MYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEE 617

Query: 693 LMQQIEDIGHTDNEK--------------EDRVLYHSERLAVGFGLIS 726
           +M++++ +G+  ++K              E R+ +HSE+LAV FGL+S
Sbjct: 618 MMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMS 665



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 90/179 (50%), Gaps = 5/179 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           V S CS        ++ H L  K+ +  ++  V  +L+++Y K G+++    V  +MP L
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           +  S NC++ GYA++    +A   + ++    + PN  T+  +L+ C     +DEG++ +
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-Y 469

Query: 242 AQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQH 297
             TMK  +  +    +   ++ +  + G +E+AE   + +  +   ++W A++   ++H
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+  +L        L T + +H+  VKS   S+ ++ +  +  Y+KCG    A   F   
Sbjct: 10  TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V S+N ++KAY+++ +   A  LF+++     +P   ++  ++S  +      D +
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYA------DAR 119

Query: 543 KVFESMV 549
           + F +MV
Sbjct: 120 ETFAAMV 126


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 202/601 (33%), Positives = 339/601 (56%), Gaps = 12/601 (1%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           SN +P          DK  +  +L+ CS    L+ G++ HA + ++    D      L++
Sbjct: 237 SNVIP----------DKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLID 286

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
            Y KCG +K+  A+  ++   +I S   ++AGY +N+   +A     ++  +  +P+ Y 
Sbjct: 287 FYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYA 346

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
            S++L  CGS+ A+  G+Q+H+  +K+       V+NAL+ MY KC  ++DA+ VF+ + 
Sbjct: 347 CSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT 406

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
             +V+ + A+I G+ + G     L +   MR   + P+  TF   L   A+L    +   
Sbjct: 407 CHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQ 466

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  +IK G +L  F  +A++D+YS    I +A+    E   +   V WN+  +G+    
Sbjct: 467 IHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVF-EGTTNKDIVVWNSLFSGYNLQL 525

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           K+EEA + +S +  +    +EFT++++  A S+L SL   +Q H++++K   ES+  + +
Sbjct: 526 KSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN 585

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y KCGS E+AE++FS     D   WNSMI  Y+Q+G+  +A+ +FE MV   I P
Sbjct: 586 ALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINP 645

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              TF++VLSACSH G V+DG + + SM + YGI P   HY+ +V LLGRAG+L  A  F
Sbjct: 646 NYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREF 704

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  + I+P A +WR L +ACR   ++++A+  ++  + +DP D+  YV LSN++A  G+ 
Sbjct: 705 IEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMW 764

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            D +  R  M +  + KEPG SWIEV  +++ F S++K H E   +Y  L +L  Q++D+
Sbjct: 765 GDVKRLRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDV 824

Query: 701 G 701
           G
Sbjct: 825 G 825



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 272/578 (47%), Gaps = 11/578 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++  +  ++  C + +  E G + H+ + K+    D +V  SLV +YAK G+I     V
Sbjct: 140 LNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLV 199

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +      +   ++ GY K+   + +   F  +   +V P+ Y  S++L  C  L  +
Sbjct: 200 FDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYL 259

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GKQ+HA  ++ +     +  N L+  Y KCG ++  +++F+ L  +N+ISWT +I G+
Sbjct: 260 KGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGY 319

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+    + + LV  M   G  P+EY  +  L SC S+     G   H+ VIK  +   +
Sbjct: 320 MQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDN 379

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV  A++DMYS    + +AK+   ++    S V +NA I G+ R      A+E F +M  
Sbjct: 380 FVTNALIDMYSKCNALDDAKRVF-DVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRL 438

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
              +    T+ S+L   + L  L   +QIH  I+K  F  +    S+LI+ Y+KC    D
Sbjct: 439 KHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRD 498

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  VF   T  D+V WNS+   Y+   ++ +A  L+  + +   RP   TF A+ +A S 
Sbjct: 499 ARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASI 558

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  GQ+ F + V + G+  +    + +VD+  + G +E A    S+   K TA  W 
Sbjct: 559 LASLPHGQQ-FHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTA-CWN 616

Query: 595 PLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            + +    H  ++ A  + + ++   ++P +   +V++ +  +  G   D  +    M  
Sbjct: 617 SMISMYAQHGKVEEALRMFETMVSNNINP-NYVTFVSVLSACSHVGFVEDGLQHYNSMAR 675

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
             I  EPG   IE Y  +     +    +E  +  EK+
Sbjct: 676 YGI--EPG---IEHYASVVTLLGRAGRLTEAREFIEKM 708



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 149/596 (25%), Positives = 282/596 (47%), Gaps = 59/596 (9%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ H  +    +  D F++  L++ Y K G +     +  +MP  ++ S + +++ Y + 
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 197 ALFDQAFSFFLKLDGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
              ++A  +FL+     V   N Y  ++++  C      + G Q+H+  +K  +     V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             +L+ +Y K G ++ A  VF+GLV +  ++WTAII G+ + G  E  L+L  LM E  +
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P++Y  +  L +C+ L     G   HA V++    +       ++D Y+  G + +A K
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRV-KAGK 298

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
            L +     + +SW   IAG+ +N    EA+E   +M R     DE+  SS+L +C  + 
Sbjct: 299 ALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVD 358

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L    QIHS ++K   E +  V ++LI+ Y+KC + +DA+RVF  +T   VV +N+MI+
Sbjct: 359 ALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIE 418

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            YS+ G    A+ +F++M ++ + P+  TF+++L   +    +Q  +++   ++ +YG  
Sbjct: 419 GYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQI-HGLIIKYGFS 477

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA----------ACRCHSD 605
            ++   S ++D+  +   +  A         K    +W  LF+          A + +SD
Sbjct: 478 LDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIV-VWNSLFSGYNLQLKSEEAFKLYSD 536

Query: 606 LKMA-----EF------------------------ISKQILELDPDDAAVYVT--LSNMY 634
           L+++     EF                        + K  LE DP     ++T  L +MY
Sbjct: 537 LQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDP-----FITNALVDMY 591

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           A+ G     EE  K+     + K+  C     +N +   ++Q+    E  +++E +
Sbjct: 592 AKCG---SVEEAEKIFS-SSVWKDTAC-----WNSMISMYAQHGKVEEALRMFETM 638



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 3/165 (1%)

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           S+    ++H ++V    + +V + + L+ +Y K GS  DA  +F ++   ++VSW+S++ 
Sbjct: 55  SILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVS 114

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEYGI 554
            Y+Q G   KA++ F +     +   N   LA ++ AC      + G +V   ++K  G 
Sbjct: 115 MYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKS-GF 173

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
             +    + +V L  + G+++ A +    L +K T   W  +   
Sbjct: 174 GEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLK-TPVTWTAIITG 217


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 199/606 (32%), Positives = 328/606 (54%), Gaps = 16/606 (2%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           GD F + +LV+ Y + G ++       +M + D+ + N +L+G  +NA   +A   F ++
Sbjct: 102 GDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRM 161

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               V  +  T S++L +C  L        +H   +K     +  V NA++ +Y K GM+
Sbjct: 162 VMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGML 221

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           E+   VF+G+  R++++W +II+G +Q G     + + C MR+ G+ P+  T     ++ 
Sbjct: 222 EEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAI 281

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           A   +   G   H  +++RG  +GD + G AIVDMY+ L +I  A++    M     +VS
Sbjct: 282 AQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSM-PVRDAVS 340

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD-EFTYSSILKACSLLPSLATCEQIHSRI 447
           WN  I G+ +N    EAI  +  M +++     + T+ S+L A S L +L    ++H+  
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           +K+    +V+VG+ +I+ Y KCG  ++A  +F Q        WN++I     +G   KA+
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF +M  EGI P + TF+++L+ACSH+GLV  G+  F  M   YGI P   HY+CMVD+
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
            GRAG+L+ A  FI N+PIKP + IW  L  ACR H +++M +  S+ + ELDP +   Y
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYY 580

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS--HSEMPK 685
           V +SNMYA+ G     +E R L++ + + K PG S IEV   +  F+S N+   H +  +
Sbjct: 581 VLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEE 640

Query: 686 VYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFE 734
           +  +L  L+ +I  +G+            ++EKE  +  HSERLA+ FG+I+ P +    
Sbjct: 641 IQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLH 700

Query: 735 CSRTLE 740
             + L 
Sbjct: 701 IYKNLR 706



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 4/184 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL   S    L+ G R HAL  KT +  D +V   ++++YAKCG +   + + +Q P 
Sbjct: 378 VSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPR 437

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
                 N +++G   +    +A S F ++    + P+H T+ ++LA C     +D+G+  
Sbjct: 438 RSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNF 497

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
               M+  Y  K    +   ++ M+ + G ++DA      + ++ +   W A++   + H
Sbjct: 498 F-NMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIH 556

Query: 298 GDYE 301
           G+ E
Sbjct: 557 GNVE 560


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 205/620 (33%), Positives = 332/620 (53%), Gaps = 14/620 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +E GR+ H LI K        V  SL++ Y     ++    +  ++   D+ S N +++G
Sbjct: 267 VEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISG 326

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y KN L D+    F+K+    V  +  T   +   C ++  +  GK LH+ ++K   L +
Sbjct: 327 YVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDR 386

Query: 253 -TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
               +N LL MY KCG +  A  VFE + ++ V+SWT++I G+ + G  +  ++L   M+
Sbjct: 387 EVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMK 446

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G+ P+ Y  T  L +CA   N   G + H  + +  +    FV  A+ DMY+  G + 
Sbjct: 447 SRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMK 506

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A      M K    +SWN  I G+ +N    EA+  F++M R ++  D  T + IL AC
Sbjct: 507 DAHDVFSHM-KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-ESKPDGTTVACILPAC 564

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L +L    +IH   +++ +  + +V +++++ Y KCG    A  +F  +   D+VSW 
Sbjct: 565 ASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWT 624

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            MI  Y  +G   +AI  F +M + GI P   +F+++L ACSHSGL+ +G K+F  M KE
Sbjct: 625 VMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKE 684

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
             I P   HY+CMVDLL R G L  A  FI  +PIKP A IW  L   CR H D+K+AE 
Sbjct: 685 CQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEK 744

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
           ++++I EL+P++   YV L+N+YAEA    + ++ RK +  + + K PGCSWIE+  KI 
Sbjct: 745 VAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKIN 804

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
            F + + S  +  K+   LK+L  ++++ G++           + EKE  +  HSE+LA+
Sbjct: 805 IFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADEREKEVALCGHSEKLAM 864

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FG+++LP       ++ L 
Sbjct: 865 AFGMLNLPPGKTIRVTKNLR 884



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 284/561 (50%), Gaps = 9/561 (1%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + + C S  S  D      +L  C+  + +  GRR  ++I  + V  D  +   LV M
Sbjct: 135 NAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFM 194

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y KCGD+K    V  ++    I   N +++ Y+ +  + ++ + F ++  + ++PN YT+
Sbjct: 195 YVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTF 254

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S++L    +++ ++EG+Q+H    KL + S   V N+L++ Y     +  A+ +F+ L  
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTD 314

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+VISW ++I+G+ ++G  ++ + +   M   G+D +  T      +CA++    +G + 
Sbjct: 315 RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVL 374

Query: 342 HAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H+  IK      +      ++DMYS  G++  A +  + M +  + VSW + I G+ R  
Sbjct: 375 HSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEK-TVVSWTSMITGYVREG 433

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
            ++ AI+ F +M       D +  +SIL AC++  +L + + +H  I ++  E+N  V +
Sbjct: 434 LSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSN 493

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L + Y KCGS +DA  VFS +   DV+SWN+MI  Y++N    +A+ LF +M  E  +P
Sbjct: 494 ALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KP 552

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
             +T   +L AC+    +  G+++    ++  G   ++   + +VD+  + G L +A   
Sbjct: 553 DGTTVACILPACASLAALDKGREIHGYALRN-GYSEDKYVTNAVVDMYVKCGLLVLARSL 611

Query: 581 ISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
              +P K     W  + A    H      +  F   ++  ++PD+ + ++++    + +G
Sbjct: 612 FDMIPNKDLVS-WTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVS-FISILYACSHSG 669

Query: 639 LQADAEEQRKLMKMKEISKEP 659
           L  +  +   +MK KE   EP
Sbjct: 670 LLDEGWKIFNIMK-KECQIEP 689


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 201/603 (33%), Positives = 329/603 (54%), Gaps = 16/603 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F + SLV+ Y + G I     V  +M   D+ + N +L+G  +NA   +A   F ++ G 
Sbjct: 104 FTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGE 163

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T S++L +C  L        +H   +K     +  V NAL+ +Y K GM+E+A
Sbjct: 164 GVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEA 223

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           + VF G+  R++++W +II+G +Q G     L++   MR  G+ P+  T     ++ A  
Sbjct: 224 QCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQG 283

Query: 333 RNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
            +       H  V++RG  + D + G AIVDMY+ L  I  A++    M     SVSWN 
Sbjct: 284 GDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM-PVQDSVSWNT 342

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
            I G+ +N    EA+E +  M +++     + T+ S+L A S L +L    ++H+  +K 
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               +V+VG+ LI+ Y KCG   +A  +F ++       WN++I     +G   +A+ LF
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M  EGI+P + TF+++L+ACSH+GLV  G+  F+ M   Y I+P   HY+CM D+LGR
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG+L+ A  FI N+PIKP + +W  L  ACR H +++M +  S+ + ELDP++   YV +
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLM 582

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS--HSEMPKVYE 688
           SNMYA+ G     +E R L++ + + K PG S IEV   +  F+S N++  H +  ++  
Sbjct: 583 SNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQA 642

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
           +L+ L+ +I  +G+            D+EKE  +  HSERLA+ FG+I+ P++      +
Sbjct: 643 ELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYK 702

Query: 738 TLE 740
            L 
Sbjct: 703 NLR 705



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 26/278 (9%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERV 478
           D FT+ S+++A    PS A+  Q+H+  ++      +V    SL+ AY + G   +A +V
Sbjct: 69  DGFTFPSLIRAA---PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +++  DV +WN+M+    +N RA +A+ LF +MV EG+     T  +VL  C     V
Sbjct: 126 FDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC-----V 180

Query: 539 QDGQKVFESMVKEYGI---LPEEAHYSC--MVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
             G +V   ++  Y +   L +E  + C  ++D+ G+ G LE A      +  +     W
Sbjct: 181 LLGDQVLALVMHVYAVKHGLDKEL-FVCNALIDVYGKLGMLEEAQCVFHGMECRDLV-TW 238

Query: 594 RPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE-----Q 646
             + + C  R  +   +  F   +   + P D    V+L++  A+ G    A+       
Sbjct: 239 NSIISGCEQRGQTAAALKMFQGMRGSGVSP-DVLTLVSLASAIAQGGDGRSAKSLHCYVM 297

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           R+   + +I    G + +++Y K+    +  +    MP
Sbjct: 298 RRGWDVDDIIA--GNAIVDMYAKLSNIEAAQRMFDSMP 333



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/260 (21%), Positives = 118/260 (45%), Gaps = 29/260 (11%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYM--NIEEKGISRNGYSTRNDSFPDGFIDDGCSNTV 104
           +A ++F+  P +  +S + LI  GYM   +  + + R G+  +++               
Sbjct: 324 AAQRMFDSMPVQDSVSWNTLI-TGYMQNGLANEAVERYGHMQKHEGL------------- 369

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
                     +   FV  VL   S    L+ G R HAL  K  +  D +V   L+++YAK
Sbjct: 370 --------KAIQGTFV-SVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAK 420

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           CG +   + + ++MP       N +++G   +    +A + F ++    ++P+H T+ ++
Sbjct: 421 CGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSL 480

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLT-MYIKCGMMEDAESVFEGL-VQ 281
           LA C     +D+G+      M++ Y +   A   A +  M  + G +++A +  + + ++
Sbjct: 481 LAACSHAGLVDQGRSFF-DVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIK 539

Query: 282 RNVISWTAIINGFKQHGDYE 301
            +   W A++   + HG+ E
Sbjct: 540 PDSAVWGALLGACRIHGNVE 559


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 194/617 (31%), Positives = 336/617 (54%), Gaps = 15/617 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA +    +    F+   L++  +  GDI     V   +P   I   N ++ GY++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F  A   +  +    V P+ +T+  +L  C  LS +  G+ +HAQ  +L + +   V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 257 NALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           N L+ +Y KC  +  A +VFEGL   +R ++SWTAI++ + Q+G+  + L +   MR+  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+       L +   L++   G   HA V+K G+ +   +  ++  MY+  G++  AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               +M KS + + WNA I+G+ +N    EAI+ F +M+  D   D  + +S + AC+ +
Sbjct: 278 ILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            SL     ++  + +S +  +V + S+LI+ + KCGS E A  VF +    DVV W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +GRAR+AI L+  M   G+ P + TFL +L AC+HSG+V++G   F +++ ++ I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF-NLMADHKI 455

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P++ HY+C++DLLGRAG L+ A   I  +P++P   +W  L +AC+ H  +++ E+ ++
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           Q+  +DP +   YV LSN+YA A L     E R  MK K ++K+ GCSW+EV  ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
             +KSH    ++  +++ +  ++++ G             D E E+ +  HSER+A+ +G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635

Query: 724 LISLPAKNKFECSRTLE 740
           LIS P       ++ L 
Sbjct: 636 LISTPQGTPLRITKNLR 652



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 153/313 (48%), Gaps = 3/313 (0%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  CS    L++GR  HA + +     D FV   L+ +YAKC  + S   V + +P  
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183

Query: 182 D--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           +  I S   +++ YA+N    +A   F  +  +DV+P+     ++L     L  + +G+ 
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  +K+    +  +  +L TMY KCG +  A+ +F+ +   N+I W A+I+G+ ++G 
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + +   M    + P+  + T A+++CA + +       +  V +       F+ +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DM++  G + E  + + +       V W+A I G+  + +  EAI  +  M R     
Sbjct: 364 LIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 420 DEFTYSSILKACS 432
           ++ T+  +L AC+
Sbjct: 423 NDVTFLGLLMACN 435



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 142/297 (47%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+  +  + L+ GR  HA + K  +  +  +  SL  MYAKCG + +   +  +M 
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +++GYAKN    +A   F ++   DV+P+  + ++ ++ C  + ++++ + 
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           ++    +  Y     +S+AL+ M+ KCG +E A  VF+  + R+V+ W+A+I G+  HG 
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + L   M   G+ PN+ TF   L +C        G+ F   +    +         
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYAC 464

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           ++D+    G + +A + +K M        W A ++   +++  E    A  Q+   D
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 42/246 (17%)

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           A  +QIH+R++    + +  + + LI A +  G    A +VF  L    +  WN++I+ Y
Sbjct: 35  AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK------- 550
           S+N   + A++++  M +  + P + TF  +L ACS    +Q G+ V   + +       
Sbjct: 95  SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154

Query: 551 --EYGI---------------------LPEEA--HYSCMVDLLGRAGKLEIALIFISNLP 585
             + G+                     LPE     ++ +V    + G+   AL   S++ 
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMR 214

Query: 586 IKPTAPIWRPLFA---ACRCHSDLKMAEFISKQI----LELDPDDAAVYVTLSNMYAEAG 638
                P W  L +   A  C  DLK    I   +    LE++PD   + ++L+ MYA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD---LLISLNTMYAKCG 271

Query: 639 LQADAE 644
             A A+
Sbjct: 272 QVATAK 277


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 204/613 (33%), Positives = 321/613 (52%), Gaps = 13/613 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +R H  + K     +  V  SL+  Y K G ++S   +  ++   D+ S N ++ G   N
Sbjct: 215 KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 274

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                    F+++  + V+ +  T  ++L  C ++  +  G+ LH   +K  +  +   S
Sbjct: 275 GFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N LL MY KCG +  A  VF  +    ++SWT+II  + + G Y   + L   M+  G+ 
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ YT T  + +CA   +   G   H+ VIK GM     V  A+++MY+  G + EA+  
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             ++      VSWN  I G+ +N    EA+E F  M +     D+ T + +L AC+ L +
Sbjct: 455 FSKI-PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKP-DDITMACVLPACAGLAA 512

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L    +IH  I++  + S++HV  +L++ Y KCG    A+ +F  +   D++SW  MI  
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G   +AI  F +M + GI P  S+F A+L+ACSHSGL+ +G K F SM  E G+ P
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEP 632

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           +  HY+C+VDLL R G L  A  FI ++PIKP   IW  L + CR H D+K+AE +++ I
Sbjct: 633 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI 692

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            EL+PD+   YV L+N+YAEA    + ++ RK M+ +   + PGCSWIEV  K   F + 
Sbjct: 693 FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 752

Query: 677 NKSHSEMPKVYEKLKQLMQQIED-----------IGHTDNEKEDRVLYHSERLAVGFGLI 725
           N  H +  K+   L +L  Q+++           I   D EKE     HSE+ A+ FG++
Sbjct: 753 NSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGIL 812

Query: 726 SLPAKNKFECSRT 738
           +LP       S+ 
Sbjct: 813 NLPPGRTVRVSKN 825



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 171/618 (27%), Positives = 298/618 (48%), Gaps = 23/618 (3%)

Query: 35  KTVEVKEPFASYSACQ----------LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGY 84
           KT+ +  P+ ++              +F K P+R  L  S +  +         +++N  
Sbjct: 6   KTIPISSPYHTHKTTSNYAKKSHNRFIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQN 65

Query: 85  STRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALIT 144
           +  N     G +     N + +   S    L       VL  C+ ++ LE G+R H++I 
Sbjct: 66  AKINKFCEMGDL----RNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVII 121

Query: 145 KTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
              +  D+ + A LV MY  CGD+     +  ++    +   N L++ YAK   F ++ S
Sbjct: 122 SNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVS 181

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F K+  + V  N YT++ +L    +L  + E K++H   +KL + S TAV N+L+  Y 
Sbjct: 182 LFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYF 241

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           K G +E A ++F+ L + +V+SW ++ING   +G     L +   M   G++ +  T   
Sbjct: 242 KFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVS 301

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +CA++ N  +G   H   +K   +        ++DMYS  G +  A +   +MG + 
Sbjct: 302 VLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT- 360

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           + VSW + IA + R     +AI  F +M       D +T +SI+ AC+   SL     +H
Sbjct: 361 TIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 420

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           S ++K+   SN+ V ++LI  Y KCGS E+A  VFS++   D+VSWN+MI  YSQN    
Sbjct: 421 SYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPN 480

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC- 563
           +A+ LF  M  +  +P + T   VL AC+    +  G+++   +++  G    + H +C 
Sbjct: 481 EALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRR-GYF-SDLHVACA 537

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDP 621
           +VD+  + G L +A +    +P K     W  + A    H   +  ++ F   +I  ++P
Sbjct: 538 LVDMYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 596

Query: 622 DDAAVYVTLSNMYAEAGL 639
           D+++    L N  + +GL
Sbjct: 597 DESSFSAIL-NACSHSGL 613



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 240/539 (44%), Gaps = 50/539 (9%)

Query: 27  KPKKCNHRKTVEVKEPFASYSAC--QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGY 84
           K K+C       +K  F S +A    L     K  G+ ++  +F+     E   +S N  
Sbjct: 210 KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS--EPDVVSWN-- 265

Query: 85  STRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALIT 144
           S  N    +GF  +G    + +    +E  +D   ++ VL  C+    L LGR  H    
Sbjct: 266 SMINGCVVNGFSGNGLEIFIQMLILGVE--VDLTTLVSVLVACANIGNLSLGRALHGFGV 323

Query: 145 KTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
           K     +   + +L++MY+KCG++     V  +M    I S   ++A Y +  L+  A  
Sbjct: 324 KACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIG 383

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F ++    V+P+ YT ++++  C   S++D+G+ +H+  +K    S   V+NAL+ MY 
Sbjct: 384 LFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYA 443

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG +E+A  VF  +  ++++SW  +I G+ Q+    + L L   M++    P++ T   
Sbjct: 444 KCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMAC 502

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +CA L     G   H  +++RG      V  A+VDMY+  G +  A + L +M    
Sbjct: 503 VLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA-QLLFDMIPKK 561

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             +SW   IAG+  +    EAI  F++M       DE ++S+IL ACS           H
Sbjct: 562 DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS-----------H 610

Query: 445 SRIVKS--KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           S ++    KF +++          N+CG     E             +  ++   ++ G 
Sbjct: 611 SGLLNEGWKFFNSMR---------NECGVEPKLEH------------YACVVDLLARMGN 649

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
             KA    E M    I+P  + +  +LS C     V+  +KV E +   + + P+   Y
Sbjct: 650 LSKAYKFIESM---PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI---FELEPDNTRY 702


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 196/537 (36%), Positives = 309/537 (57%), Gaps = 16/537 (2%)

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
             + L G+D   N   Y+T+L  C    AI EG+++HA  +K  YL    +   L+  Y+
Sbjct: 47  LHMALRGLDT--NFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYV 104

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KC  + DA  VF+ + +RNV+SWTA+I+ + Q G   + L L   M   G +PNE+TF  
Sbjct: 105 KCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFAT 164

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L SC       +G   H+ +IK       +VG++++DMY+  G+I EA+   + + +  
Sbjct: 165 VLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPER- 223

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             VS  A I+G+ +    EEA+E F ++ R     +  TY+S+L A S L +L   +Q+H
Sbjct: 224 DVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVH 283

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           + +++S+  S V + +SLI+ Y+KCG+   A R+F  L    V+SWN+M+  YS++G  R
Sbjct: 284 NHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGR 343

Query: 505 KAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYS 562
           + + LF  M+ E  ++P + T LAVLS CSH GL   G  +F  M   +  + P+  HY 
Sbjct: 344 EVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYG 403

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD 622
           C+VD+LGRAG++E A  F+  +P +P+A IW  L  AC  HS+L + EF+  Q+L+++P+
Sbjct: 404 CVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPE 463

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
           +A  YV LSN+YA AG   D    R LM  K ++KEPG SWIE+   ++ F + + SH  
Sbjct: 464 NAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPR 523

Query: 683 MPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
             +V  K+++L  + ++ G+            + +KE  +L HSE+LA+ FGLI+ P
Sbjct: 524 REEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATP 580



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 211/462 (45%), Gaps = 52/462 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C R+  +  G+R HA + KT      ++   L+  Y KC  ++    V   MP  +
Sbjct: 64  VLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERN 123

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++ Y++     QA S F+++     +PN +T++T+L  C   S    G+Q+H+
Sbjct: 124 VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHS 183

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL Y +   V ++LL MY K G + +A  +F+ L +R+V+S TAII+G+ Q G  E+
Sbjct: 184 HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   ++ +G+  N  T+T  L + + L     G   H  +++  +     +  +++D
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLID 303

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDE 421
           MYS  G +  A++    + +  + +SWNA + G+ ++ +  E +E F+ M+  N    D 
Sbjct: 304 MYSKCGNLTYARRIFDTLHER-TVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDS 362

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED-AERVFS 480
            T  ++L  CS                                     G  ED    +F 
Sbjct: 363 VTVLAVLSGCS------------------------------------HGGLEDKGMDIFY 386

Query: 481 QLTAA------DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
            +T+       D   +  ++    + GR   A    +KM  E   P+ + +  +L ACS 
Sbjct: 387 DMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFE---PSAAIWGCLLGACSV 443

Query: 535 SGLVQDGQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGKLE 575
              +  G+ V   +++   I PE A +Y  + +L   AG+ E
Sbjct: 444 HSNLDIGEFVGHQLLQ---IEPENAGNYVILSNLYASAGRWE 482


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 335/629 (53%), Gaps = 14/629 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     +E G   H LI K  +  D  V   L++MY K   +     +  +M   D
Sbjct: 281 VLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRD 340

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY++  L++++   F+++     +P+  T +++L  CG L  ++ GK +H 
Sbjct: 341 AVSWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHD 399

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +   Y   T  SN L+ MY KCG +  ++ VF G+  ++ +SW ++IN + Q+G +++
Sbjct: 400 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDE 459

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L  +M+ D + P+  T+ + L+    L +  +G   H  + K G      V   +VD
Sbjct: 460 AMKLFKMMKTD-VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVD 518

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  GE+ ++ K  + M K+   ++WN  IA    ++     +   S+M       D  
Sbjct: 519 MYAKCGEMGDSLKVFENM-KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 577

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  SIL  CSLL +    ++IH  I K   ES+V VG+ LIE Y+KCGS  ++ +VF  +
Sbjct: 578 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 637

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVV+W ++I A    G  +KA+  F +M   GI P +  F+A++ ACSHSGLV++G 
Sbjct: 638 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 697

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M K+Y I P   HY+C+VDLL R+  L+ A  FI ++P+KP + IW  L +ACR 
Sbjct: 698 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 757

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
             D ++A+ +S++I+EL+PDD   YV +SN+YA  G        RK +K + + K+PGCS
Sbjct: 758 SGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCS 817

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           W+E+ NK+Y F +  K   +  +V + L  L   +   G+  N           EK D +
Sbjct: 818 WMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDIL 877

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSERLA+ FGL++       +  + L 
Sbjct: 878 CGHSERLAIAFGLLNTKPGTPLQVMKNLR 906



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 260/539 (48%), Gaps = 9/539 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+     E+ +  H  +       D ++  +L++MY +  D+     V ++MP  D
Sbjct: 180 VINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 239

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++GY  N  +++A   + +   + V P+ YT S++L  CG L +++EG  +H 
Sbjct: 240 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 299

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K+       V+N LL+MY K   + D   +F+ +V R+ +SW  +I G+ Q G YE+
Sbjct: 300 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 359

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M  +   P+  T T  L +C  L +   G   H  +I  G          +++
Sbjct: 360 SIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 418

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  +++    M K   SVSWN+ I  + +N   +EA++ F +M++ D   D  
Sbjct: 419 MYAKCGNLLASQEVFSGM-KCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSV 476

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TY  +L   + L  L   +++H  + K  F SN+ V ++L++ Y KCG   D+ +VF  +
Sbjct: 477 TYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENM 536

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D+++WN++I +   +      + +  +M  EG+ P  +T L++L  CS     + G+
Sbjct: 537 KARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGK 596

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   + K  G+  +    + ++++  + G L  +      +  K     W  L +AC  
Sbjct: 597 EIHGCIFK-LGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVT-WTALISACGM 654

Query: 603 HSDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           + + K A   F   +   + PD  A +V +    + +GL  +       MK K+   EP
Sbjct: 655 YGEGKKAVRAFGEMEAAGIVPDHVA-FVAIIFACSHSGLVEEGLNYFHRMK-KDYKIEP 711



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 256/536 (47%), Gaps = 9/536 (1%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKN 196
           + H+LI    +      +A L+  YA   D  S  +V +   P  ++   N ++     N
Sbjct: 93  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHN 152

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            LF +A S + +   I +QP+ YT+ +++  C  L   +  K +H + + + + S   + 
Sbjct: 153 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIG 212

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NAL+ MY +   ++ A  VFE +  R+V+SW ++I+G+  +G + + L +    R  G+ 
Sbjct: 213 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVV 272

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ YT +  L +C  L +   G + H  + K G+     V   ++ MY     + + ++ 
Sbjct: 273 PDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRI 332

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             +M     +VSWN  I G+ +    EE+I+ F +MV N    D  T +SIL+AC  L  
Sbjct: 333 FDKM-VLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITSILQACGHLGD 390

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   + +H  ++ S +E +    + LI  Y KCG+   ++ VFS +   D VSWNSMI  
Sbjct: 391 LEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINV 450

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y QNG   +A+ LF KM+   ++P + T++ +LS  +  G +  G+++   + K  G   
Sbjct: 451 YIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK-MGFNS 508

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
                + +VD+  + G++  +L    N+  +     W  + A+C    D  +    IS+ 
Sbjct: 509 NIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIIT-WNTIIASCVHSEDCNLGLRMISRM 567

Query: 616 ILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-GCSWIEVYNK 669
             E + PD A +   L      A  +   E    + K+   S  P G   IE+Y+K
Sbjct: 568 RTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 623



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 55/405 (13%)

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           ALAS A+    H     H+ +I  G+         ++  Y+   +   +    +    S 
Sbjct: 81  ALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSN 137

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           +   WN+ I     N    EA+  +S+  R     D +T+ S++ AC+ L      + IH
Sbjct: 138 NVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIH 197

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
            R++   F S++++G++LI+ Y +    + A +VF ++   DVVSWNS+I  Y+ NG   
Sbjct: 198 DRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWN 257

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ------------------------- 539
           +A+ ++ +    G+ P + T  +VL AC   G V+                         
Sbjct: 258 EALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLL 317

Query: 540 ----------DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL--PIK 587
                     DG+++F+ MV     L +   ++ M+    + G  E ++     +    K
Sbjct: 318 SMYCKFNGLIDGRRIFDKMV-----LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK 372

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQ 646
           P       +  AC    DL+  +++   ++    + D      L NMYA+ G    ++E 
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
              MK K+       SW    N +   + QN S  E  K+++ +K
Sbjct: 433 FSGMKCKD-----SVSW----NSMINVYIQNGSFDEAMKLFKMMK 468



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 11/181 (6%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +SSI +A +   +     ++HS I+      +V   + LI  Y     + D    FS   
Sbjct: 75  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKY---AHFRDPTSSFSVFR 131

Query: 484 AA----DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            A    +V  WNS+I+A + NG   +A+ L+ +     ++P   TF +V++AC  +GL+ 
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD 189

Query: 540 -DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +  K     V   G   +    + ++D+  R   L+ A      +P++     W  L +
Sbjct: 190 FEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-WNSLIS 248

Query: 599 A 599
            
Sbjct: 249 G 249


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 206/633 (32%), Positives = 339/633 (53%), Gaps = 26/633 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     L   R  H  + KT    D FV  SLVN Y +C   +    +   MP 
Sbjct: 82  VPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE 141

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ +   L+ GY  N+        F+++  +   P+HYT    L  C +   +D GKQ+
Sbjct: 142 RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQV 201

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD- 299
           H   +K    S T++ N+L ++Y K G ++ A   F  + ++NVI+WT +I+   +  + 
Sbjct: 202 HGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEEC 261

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  + L   M  DG+ PNE+T T  ++ C +  + ++G    A   K G      V  +
Sbjct: 262 VELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNS 321

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTEEAIEA 408
            + +Y   GE  EA +  ++M + AS ++WNA I+G+ +             +  +A+  
Sbjct: 322 TMYLYLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTI 380

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  + R+    D FT+SSIL  CS + +L   EQIH++ +KS F S+V V S+L+  YNK
Sbjct: 381 FRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNK 440

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  +DA + F ++     V+W SMI  YSQ+G+ ++AI LFE+M + G+RP   TF+++
Sbjct: 441 CGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSL 500

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACS++GLV++ +  F+ M KEY I P   HY CM+D+  R G++E A  FI     +P
Sbjct: 501 LSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEP 560

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L A CR H ++++A + + ++LEL P     Y+ L NMY       D    RK
Sbjct: 561 NEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRK 620

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH------ 702
           LMK +++      SWI + +K+Y F + +++H +  ++Y+ L+ L+++ + IG+      
Sbjct: 621 LMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNA 680

Query: 703 --TDNEKEDR-----VLYHSERLAVGFGLISLP 728
             +D+E +++     + +HSERLAV  GL+  P
Sbjct: 681 ELSDSEDDEKPAAGSLKHHSERLAVALGLLQTP 713



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 220/471 (46%), Gaps = 25/471 (5%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L  C    ++   + +H    K    +   V+ +L+  Y++C    DA  +F+G+ 
Sbjct: 81  YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RNV++WTA++ G+  +      L +   M E G  P+ YT    L +C +  +  +G  
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQ 200

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   IK G      +G ++  +Y+ LG +  A +    + +  + ++W   I+    ++
Sbjct: 201 VHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVITWTTMISACAEDE 259

Query: 401 K-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           +  E  +  F  M+ +    +EFT +S++  C     L   +Q+ +   K   E+N+ V 
Sbjct: 260 ECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVK 319

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ-----------NGRARKAII 508
           +S +  Y + G  ++A R+F Q+  A +++WN+MI  Y+Q             R  +A+ 
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALT 379

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F  +    ++P   TF ++LS CS    ++ G+++    +K  G L +    S +V++ 
Sbjct: 380 IFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLSDVVVNSALVNMY 438

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILELDPDDAAV 626
            + G ++ A      +P + T   W  + +    H   + A   F   ++  + P++   
Sbjct: 439 NKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE-IT 496

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIYR 672
           +V+L +  + AGL  +AE    +MK KE   EP     GC  I+++ ++ R
Sbjct: 497 FVSLLSACSYAGLVEEAEHYFDMMK-KEYCIEPVVDHYGC-MIDMFVRLGR 545



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 132/285 (46%), Gaps = 15/285 (5%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+    A     Y  +L  C    SL     +H  + K+   +++ V +SL+ AY +C +
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             DA R+F  +   +VV+W +++  Y+ N +    + +F +M+  G  P++ T  A L+A
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C  S  V  G++V    +K YG     +  + +  L  + G L+ AL     +P K    
Sbjct: 189 CLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVI 246

Query: 592 IWRPLFAAC----RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
            W  + +AC     C  +L M+ FI   +  + P++     TL+++ +  G + D    +
Sbjct: 247 TWTTMISACAEDEEC-VELGMSLFIDMLMDGVMPNE----FTLTSVMSLCGTRLDLNLGK 301

Query: 648 KLMKMKEISKEPGC-SWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           ++   +  S + GC + + V N     + +     E  +++E+++
Sbjct: 302 QV---QAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME 343


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 226/648 (34%), Positives = 355/648 (54%), Gaps = 54/648 (8%)

Query: 130 EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK-------------------- 169
           E  L  G+  HAL  K+ V    +++   VN+Y+KCG +                     
Sbjct: 21  ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVI 80

Query: 170 -------SMVAVVKQM----PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
                  S + + +Q+    P  D  S N L++GYA       A   F ++  +  + + 
Sbjct: 81  VKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDG 140

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           +T S ++A C     +D  KQLH   +   + S ++V+NA +T Y K G++ +A SVF G
Sbjct: 141 FTLSGLIAAC--CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198

Query: 279 LVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           +   R+ +SW ++I  + QH +  K L L   M   G   + +T    L +  SL +   
Sbjct: 199 MDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYS---GLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           G  FH ++IK G      VG+ ++D YS   G   + +++K  +E+  S   V WN  I+
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEI-LSPDLVLWNTMIS 317

Query: 395 GFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           G+  N++ +EEA+++F QM R     D+ ++  +  ACS L S +  +QIH   +KS   
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIP 377

Query: 454 SN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           SN + V ++LI  Y K G+  DA RVF ++   + VS+N MIK Y+Q+G   +A+ L+++
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+  GI P N TF+A+LSAC+H G V +GQK F +M + + I PE  HYSCM+DLLGRAG
Sbjct: 438 MLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
           KLE A  FI  +P KP +  W  L  ACR H ++ +AE  +K+++ + P  A  YV L+N
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLAN 557

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MYA+AG   +    RK M+ K I K+PGCSWIEV  K + F +++ SH  + +V E L++
Sbjct: 558 MYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEE 617

Query: 693 LMQQIEDIGHTDNEK--------------EDRVLYHSERLAVGFGLIS 726
           +M++++ +G+  ++K              E R+ +HSE+LAV FGL+S
Sbjct: 618 MMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMS 665



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 43/341 (12%)

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK------ 374
           +F   L    + R+   G   HA  +K  +A   ++    V++YS  G +  A+      
Sbjct: 10  SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69

Query: 375 ------------------------KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                                   +QL +      +VS+N  I+G+   ++T  A+  F 
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +M       D FT S ++ AC     L   +Q+H   V   F+S   V ++ +  Y+K G
Sbjct: 130 RMRELGFEVDGFTLSGLIAACCDRVDL--IKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 471 SWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
              +A  VF  +    D VSWNSMI AY Q+    KA+ L+++M+ +G +    T  +VL
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL----GRAGKLEIALIFISNLP 585
           +A +    +  G++    ++K  G        S ++D      GR G  +   +F   L 
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILS 306

Query: 586 IKPTAPIWRPLFAACRC---HSDLKMAEFISKQILELDPDD 623
             P   +W  + +       HS+  +  F   Q +   PDD
Sbjct: 307 --PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDD 345



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 13/228 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           V S CS       G++ H L  K+ +  ++  V  +L+++Y K G++     V  +MP L
Sbjct: 351 VTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL 410

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           +  S NC++ GYA++    +A   + ++    + PN+ T+  +L+ C     +DEG Q +
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEG-QKY 469

Query: 242 AQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHG 298
             TMK  +  +    +   ++ +  + G +E+AE   + +  +   ++W A++   ++H 
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529

Query: 299 DY---EKPLRLVCLMREDGIDP-----NEYTFTVALASCASLRNSHMG 338
           +    E+  + + +M+     P     N Y         AS+R S  G
Sbjct: 530 NMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRG 577


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 199/640 (31%), Positives = 352/640 (55%), Gaps = 17/640 (2%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q ++ +L  C+R+   + G + H  + K+    +   +  L++MY KC +      V  
Sbjct: 6   RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            MP  ++ S + L++G+  N     + S F ++    + PN +T+ST L  CG L+A+++
Sbjct: 66  SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G Q+H   +K+ +     V N+L+ MY KCG + +AE VF  +V R++ISW A+I GF  
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185

Query: 297 HGDYEKPLRLVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-- 352
            G   K L    +M+E  I   P+E+T T  L +C+S    + G   H  +++ G     
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              +  ++VD+Y   G ++ A+K   ++ K  + +SW++ I G+ +  +  EA+  F ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
              ++  D F  SSI+   +    L   +Q+ +  VK        V +S+++ Y KCG  
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           ++AE+ F+++   DV+SW  +I  Y ++G  +K++ +F +M+   I P    +LAVLSAC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SHSG++++G+++F  +++ +GI P   HY+C+VDLLGRAG+L+ A   I  +PIKP   I
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W+ L + CR H D+++ + + K +L +D  + A YV +SN+Y +AG   +    R+L  +
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHT-------- 703
           K + KE G SW+E+  +++ F S   SH   P + E LK+  +++ E++G+         
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604

Query: 704 ---DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              D  KE+ +  HSE+LA+G  L +     K +  R  +
Sbjct: 605 DIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFK 644


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 192/519 (36%), Positives = 312/519 (60%), Gaps = 15/519 (2%)

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           T+L  C  L+ ++EGK +HA  +  ++     + N LL +Y KCG +  A  +F+ +  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM--GYM 340
           +V++WTA+I G+ QH   +  L L+  M   G+ PN++T    L + + + ++ +  G  
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   ++ G     +V  AI+DMY+    + EA+     M  S + VSWNA IAG+ R  
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVM-VSKNEVSWNALIAGYARKG 198

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + ++A   FS M+R +     FTYSS+L AC+ + SL   + +H+ ++K   +    VG+
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y K GS EDA++VF +L   DVVSWNSM+  YSQ+G  + A+  FE+M+   I P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TFL VL+ACSH+GL+ +G+  F+ M+K+Y + P+ +HY  MVDLLGRAG L+ A+ F
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           IS +PIKPTA +W  L  ACR H ++++  + ++ I ELD      +V L N+YA AG  
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRW 437

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            DA + RK+MK   + KEP CSW+E+ N+++ F + + +H +  +++   +Q+  +I++I
Sbjct: 438 NDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEI 497

Query: 701 GHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           G+  +           E+E ++ YHSE+LA+ F L++ P
Sbjct: 498 GYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTP 536



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 252/555 (45%), Gaps = 56/555 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  G+  HAL+  +    D  +  +L+N+YAKCGD+     +  +M   D
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID--EGKQL 240
           + +   L+ GY+++     A     ++  I ++PN +T +++L     + + D  +G+QL
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   ++  Y S   VS A+L MY +C  +E+A+ +F+ +V +N +SW A+I G+ + G  
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           +K   L   M  + + P  +T++  L +CAS+ +   G   HA +IK G  L  FVG  +
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTL 260

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+  G I +AKK    + K    VSWN+ + G+ ++   + A++ F +M+R   A +
Sbjct: 261 LDMYAKSGSIEDAKKVFDRLAKR-DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + T+  +L ACS    L         + K   E  +    ++++   + G  + A +  S
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFIS 379

Query: 481 QLTAADVVS-WNSMIKA----------------------------------YSQNGRARK 505
           ++      + W +++ A                                  Y+  GR   
Sbjct: 380 EMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWND 439

Query: 506 AIILFEKMVVEGIR--PTNS---------TFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           A  + + M   G++  P  S          F+A   A      + +  +     +KE G 
Sbjct: 440 AAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGY 499

Query: 555 LPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRCHSDLK- 607
           +P+ +H    +D   R  KL+     +AL F + N P   T  I + +     CHS  K 
Sbjct: 500 VPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFKF 559

Query: 608 MAEFISKQILELDPD 622
           +++ + ++I+  D +
Sbjct: 560 VSKLVEREIIVRDTN 574


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 205/651 (31%), Positives = 344/651 (52%), Gaps = 21/651 (3%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           S+ +P + +  +S     F   +L +   +  L    + HA +  + +    F+    VN
Sbjct: 60  SDYIPYSGFDFDS-----FFSSLLDHSVHKRHLN---QIHAQLVVSGLVESGFLVTKFVN 111

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
                G+I     V  + P   +   N ++ GY+ +  F  A   + ++    V P+ +T
Sbjct: 112 ASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFT 171

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
              +L  C  +  ++ GK++H Q  +L + S   V N L+ +Y KCG +E A  VFEGL 
Sbjct: 172 LPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLD 231

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            RN++SWT++I+G+ Q+G   + LR+   MR+  + P+       L +   + +   G  
Sbjct: 232 DRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKS 291

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  V+K G+     +  ++  MY+  G++  A+    +M +  + + WNA I+G+ +N 
Sbjct: 292 IHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQM-EIPNVMMWNAMISGYAKNG 350

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
            T EA+  F +M+  +   D  T  S + AC+ + SL   + +   I K+++ ++V V +
Sbjct: 351 YTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNT 410

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +LI+ + KCGS + A  VF +    DVV W++MI  Y  +GR + AI LF  M   G+ P
Sbjct: 411 ALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCP 470

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TF+ +L+AC+HSGLV++G ++F SM K YGI     HY+C+VDLLGR+G L  A  F
Sbjct: 471 NDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDF 529

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I+ +PI+P   +W  L  AC+ +  + + E+ ++Q+  LDP +   YV LSN+YA + L 
Sbjct: 530 ITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLW 589

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL------- 693
               + R LM+ K +SK+ G S IE+  K+  F   +KSH    +++E+L+ L       
Sbjct: 590 DSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEA 649

Query: 694 --MQQIEDIGHTDN--EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             +  IE + H  N  EKE+ +  HSERLA+ +GLIS         ++ L 
Sbjct: 650 GFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLR 700


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 205/631 (32%), Positives = 348/631 (55%), Gaps = 13/631 (2%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C R   L  GR  HA L+   A     F+   L+ MY+ C D+ S + +   MP  
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           +  S   L++G ++N +   A + F  +    V P  +  S+      +L A   G QLH
Sbjct: 86  NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLH 145

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++L + ++  V++ L  MY KCG++ +A  VF+ + Q++ ++WTA+I+G+ ++G  E
Sbjct: 146 CVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLE 205

Query: 302 KP-LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L    + RE  +  +++ F   L++   L++  +    H  V K G  L   V  A+
Sbjct: 206 AAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNAL 265

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+   ++  A + LK      + VS  + I G+      EEA+  + ++ R     +
Sbjct: 266 IDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPN 325

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           EFT+SS++K C++   L    Q+H++++K+    +  VGS+L++ Y KCG    + ++F+
Sbjct: 326 EFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFN 385

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++     ++WN++I  ++Q+G  R+AI  F++M+  GIRP +  F+++L+ACSH+GLV +
Sbjct: 386 EIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDE 445

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G K F SM + +GI P+E HYSC++D  GRAG+L+ A  FIS +PIKP A  W  L  AC
Sbjct: 446 GLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGAC 505

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R     ++ E  ++ +++L+P +  ++V+LS +YA  G   D +  RKLM+   I K PG
Sbjct: 506 RMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPG 565

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
            SW++   K + F S++ SH +   +YEKL++L  +I++ G+            D  KE 
Sbjct: 566 FSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKER 625

Query: 710 RVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + YHSER+AV F LIS+PA       + L 
Sbjct: 626 ILRYHSERIAVAFALISMPATKPIIVKKNLR 656


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 203/615 (33%), Positives = 334/615 (54%), Gaps = 39/615 (6%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H  + K     D F   +LV+MYAK GD+   ++V +++   DI S N ++AG   
Sbjct: 277 GKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL 336

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   +QA                      L + G +      +QLH+  MK+   S   V
Sbjct: 337 HEHHEQA----------------------LELLGQMK-----RQLHSSLMKMDMESDLFV 369

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           S  L+ MY KC ++EDA   F  L ++++I+W AII+G+ Q+ +  + L L   M ++GI
Sbjct: 370 SVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 429

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             N+ T +  L S A L+  H+    H   +K G     +V  +++D Y     + +A++
Sbjct: 430 GFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAER 489

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             +E       VS+ + I  + +  + EEA++ F +M   +   D F  SS+L AC+ L 
Sbjct: 490 IFEEC-TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 548

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +    +Q+H  I+K  F  ++  G+SL+  Y KCGS +DA R FS+LT   +VSW++MI 
Sbjct: 549 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 608

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             +Q+G  R+A+ LF +M+ EG+ P + T ++VL AC+H+GLV + +  FESM + +G  
Sbjct: 609 GLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFK 668

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P + HY+CM+DLLGRAGK+  A+  ++ +P +  A +W  L  A R H D+++    ++ 
Sbjct: 669 PMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEM 728

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           +  L+P+ +  +V L+N+YA AG   +  E R+LM+  ++ KEPG SWIEV +K+Y F  
Sbjct: 729 LFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLV 788

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            ++SH    ++Y KL +L   ++  G+             +EKE  + +HSE+LAV FGL
Sbjct: 789 GDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGL 848

Query: 725 ISLPAKNKFECSRTL 739
           I+ P        + L
Sbjct: 849 IATPQGAPIRVKKNL 863



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 261/564 (46%), Gaps = 78/564 (13%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++LS C   + L  G + HA ITK+ +  D  +   L+N+Y+KC        +V +    
Sbjct: 61  KLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEP 120

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S + L++GYA+N L   A   F ++  + V+ N +T+S++L  C  +  +  GKQ+H
Sbjct: 121 DLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVH 180

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   +     V+N L+ MY KC    D++ +F+ + +RNV+SW A+ + + Q     
Sbjct: 181 GVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCG 240

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + + L   M   GI PNE++ +  + +C  LR+S  G + H  +IK G     F   A+V
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+ +G++ +A    +++ K    VSWNA IAG   ++  E+A+E   QM R       
Sbjct: 301 DMYAKVGDLADAISVFEKI-KQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR------- 352

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
                               Q+HS ++K   ES++ V   L++ Y+KC   EDA   F+ 
Sbjct: 353 --------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 392

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA---------- 531
           L   D+++WN++I  YSQ     +A+ LF +M  EGI    +T   +L +          
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452

Query: 532 ----------------------------CSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
                                       CSH   V+D +++FE        + +   ++ 
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSH---VEDAERIFEECT-----IGDLVSFTS 504

Query: 564 MVDLLGRAGKLEIAL---IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           M+    + G+ E AL   + + ++ +KP   +   L  AC   S  +  + +   IL+  
Sbjct: 505 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 564

Query: 621 -PDDAAVYVTLSNMYAEAGLQADA 643
              D     +L NMYA+ G   DA
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDA 588



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 164/308 (53%), Gaps = 5/308 (1%)

Query: 129 REECLEL----GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
            E+ LEL     R+ H+ + K  +  D FV+  LV+MY+KC  ++        +P  D+ 
Sbjct: 340 HEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLI 399

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           + N +++GY++     +A S F+++    +  N  T ST+L     L  +   +Q+H  +
Sbjct: 400 AWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLS 459

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           +K  + S   V N+L+  Y KC  +EDAE +FE     +++S+T++I  + Q+G  E+ L
Sbjct: 460 VKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEAL 519

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
           +L   M++  + P+ +  +  L +CA+L     G   H  ++K G  L  F G ++V+MY
Sbjct: 520 KLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMY 579

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           +  G I +A +   E+ +    VSW+A I G  ++    +A++ F+QM++   + +  T 
Sbjct: 580 AKCGSIDDAGRAFSELTERG-IVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 638

Query: 425 SSILKACS 432
            S+L AC+
Sbjct: 639 VSVLGACN 646



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 186/376 (49%), Gaps = 14/376 (3%)

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I    Q  +  +   ++ L+ +    P   +++  L+ C + ++   G   HA + K G
Sbjct: 27  LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           ++    +   ++++YS       A+K + E       VSW+A I+G+ +N     A+ AF
Sbjct: 87  LSDDPSIRNHLINLYSKCRXFGYARKLVDE-SSEPDLVSWSALISGYAQNGLGGGALMAF 145

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            +M      C+EFT+SS+LKACS++  L   +Q+H  +V S FE +V V ++L+  Y KC
Sbjct: 146 HEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKC 205

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
             + D++R+F ++   +VVSWN++   Y Q     +A+ LF +MV+ GI+P   +  +++
Sbjct: 206 DEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMV 265

Query: 530 SACSHSGLVQDGQ-KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           +AC  +GL    + K+    + + G   +    + +VD+  + G L  A+     +  +P
Sbjct: 266 NAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK-QP 322

Query: 589 TAPIWRPLFAACRCHSDL--------KMAEFISKQILELDPD-DAAVYVTLSNMYAEAGL 639
               W  + A C  H           +M   +   ++++D + D  V V L +MY++  L
Sbjct: 323 DIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDL 382

Query: 640 QADAEEQRKLMKMKEI 655
             DA     L+  K++
Sbjct: 383 LEDARMAFNLLPEKDL 398



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 155/305 (50%), Gaps = 1/305 (0%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +D  +  P   +YS +L+ C +  ++  G Q+HA   K       ++ N L+ +Y KC  
Sbjct: 47  IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRX 106

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
              A  + +   + +++SW+A+I+G+ Q+G     L     M   G+  NE+TF+  L +
Sbjct: 107 FGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKA 166

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C+ +++  +G   H  V+  G     FV   +V MY+   E  ++K+   E+ +  + VS
Sbjct: 167 CSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPER-NVVS 225

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA  + + +     EA+  F +MV +    +EF+ SS++ AC+ L   +  + IH  ++
Sbjct: 226 WNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  ++ +    ++L++ Y K G   DA  VF ++   D+VSWN++I     +    +A+ 
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345

Query: 509 LFEKM 513
           L  +M
Sbjct: 346 LLGQM 350



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 4/186 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C+     E G++ H  I K     D F   SLVNMYAKCG I        ++    
Sbjct: 540 LLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERG 599

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S + ++ G A++    QA   F ++    V PNH T  ++L  C     + E K L+ 
Sbjct: 600 IVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAK-LYF 658

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGD 299
           ++M+  +  K    +   ++ +  + G + +A E V +   + N   W A++   + H D
Sbjct: 659 ESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKD 718

Query: 300 YEKPLR 305
            E   R
Sbjct: 719 VELGRR 724


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 205/635 (32%), Positives = 340/635 (53%), Gaps = 21/635 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY-- 180
           +L  CS  + L+LGR  H       +  D +V+ +L++MYAKCG +     +   + +  
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            DI + N ++A ++ +AL  Q      ++    V PN  T  ++L   G  +A+ +GK +
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++  +     +  ALL MY KC ++  A  +F  + ++N + W+A+I G+  H   
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292

Query: 301 EKPLRL----VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
              L L    +C+    G++P   T    L +CA L +   G   H  +IK GM L   V
Sbjct: 293 SDALALYDDMLCIY---GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTV 349

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G +++ MY+  G +  A   L EM  +  +VS++A I+G  +N   E+A+  F QM  + 
Sbjct: 350 GNSLISMYAKCGIMDNAVGFLDEM-IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
            A    T  ++L ACS L +L      H   V   F ++  + +++I+ Y+KCG    + 
Sbjct: 409 IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISR 468

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F ++   D++SWN+MI  Y  +G   +A+ LF+++   G++P + T +AVLSACSHSG
Sbjct: 469 EIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSG 528

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV +G+  F SM + + I P  AHY CMVDLL RAG L+ A  FI  +P  P   IW  L
Sbjct: 529 LVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGAL 588

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            AACR H +++M E +SK+I  L P+    +V +SN+Y+  G   DA   R + +     
Sbjct: 589 LAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYK 648

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           K PGCSW+E+   I+ F   ++SH +   + +KL++L+ Q++ +G+            + 
Sbjct: 649 KSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEE 708

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           EKE  +LYHSE++A+ FG+++    ++   ++ L 
Sbjct: 709 EKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLR 743



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 220/466 (47%), Gaps = 14/466 (3%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  Q+P   +   N ++  YA +  F Q+   +L +  + V P ++T+  +L  C SL A
Sbjct: 63  VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAII 291
           +  G+ +H     L       VS ALL MY KCG +  A+++F  +    R++++W A+I
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             F  H  + + +  V  M++ G+ PN  T    L +       H G   HA  I+    
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFF 242

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               + TA++DMY+    ++ A+K    + K  + V W+A I G+  +    +A+  +  
Sbjct: 243 DNVVLQTALLDMYAKCHLLFYARKIFNTVNKK-NDVCWSAMIGGYVLHDSISDALALYDD 301

Query: 412 MV----RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
           M+     N       T +++L+AC+ L  L   +++H  ++KS  + +  VG+SLI  Y 
Sbjct: 302 MLCIYGLNPTPA---TLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG  ++A     ++ A D VS++++I    QNG A KA+++F +M   GI P   T +A
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L ACSH   +Q G       V   G   + +  + ++D+  + GK+ I+      +  +
Sbjct: 419 LLPACSHLAALQHGTCCHGYTVVR-GFTNDTSICNAIIDMYSKCGKITISREIFDRMQNR 477

Query: 588 PTAPIWRPLFAACRCHSDL--KMAEFISKQILELDPDDAAVYVTLS 631
                W  +      H      ++ F   Q L L PDD  +   LS
Sbjct: 478 DIIS-WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLS 522



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 169/338 (50%), Gaps = 3/338 (0%)

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           A +  L   +I    ++ A  VF+ + + +V+ W  +I  +   G +++ + L   M + 
Sbjct: 42  AAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQL 101

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+ P  +TF   L +C+SL+   +G + H      G+++  +V TA++ MY+  G +++A
Sbjct: 102 GVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQA 161

Query: 374 KKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +     +  +    V+WNA IA F  +    + I + +QM +     +  T  SIL    
Sbjct: 162 QTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIG 221

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
              +L   + IH+  +++ F  NV + ++L++ Y KC     A ++F+ +   + V W++
Sbjct: 222 QANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSA 281

Query: 493 MIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           MI  Y  +     A+ L++ M+ + G+ PT +T   +L AC+    ++ G+K+   M+K 
Sbjct: 282 MIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS 341

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            G+  +    + ++ +  + G ++ A+ F+  +  K T
Sbjct: 342 -GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDT 378



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 149/314 (47%), Gaps = 2/314 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L    +   L  G+  HA   +     +  +  +L++MYAKC  +     +   + 
Sbjct: 213 LVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN 272

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGK 238
             +    + ++ GY  +     A + +  +  I  + P   T +TML  C  L+ +  GK
Sbjct: 273 KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGK 332

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           +LH   +K      T V N+L++MY KCG+M++A    + ++ ++ +S++AII+G  Q+G
Sbjct: 333 KLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNG 392

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             EK L +   M+  GI P   T    L +C+ L     G   H   + RG      +  
Sbjct: 393 YAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICN 452

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           AI+DMYS  G+I  +++    M ++   +SWN  I G+  +    EA+  F ++      
Sbjct: 453 AIIDMYSKCGKITISREIFDRM-QNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLK 511

Query: 419 CDEFTYSSILKACS 432
            D+ T  ++L ACS
Sbjct: 512 PDDVTLIAVLSACS 525



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 2/184 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I +L  CS    L+ G   H          D  +  ++++MY+KCG I     +  +M 
Sbjct: 416 MIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQ 475

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK- 238
             DI S N ++ GY  + L  +A S F +L  + ++P+  T   +L+ C     + EGK 
Sbjct: 476 NRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKY 535

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
              + +       + A    ++ +  + G +++A +  + +    NV  W A++   + H
Sbjct: 536 WFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTH 595

Query: 298 GDYE 301
            + E
Sbjct: 596 KNIE 599


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 186/532 (34%), Positives = 309/532 (58%), Gaps = 13/532 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           LD  ++ P    Y + +  C     +++ +++HA     ++     + N+L+ MY KC  
Sbjct: 42  LDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRS 101

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + DA +VF+ + +++++SWT++I G+ Q+    + + L+  M +    PN +TF   L +
Sbjct: 102 VLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
             +  +S  G   HA  +K G     +VG+A++DMY+  G++  A     ++  S + VS
Sbjct: 162 AGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVS 220

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I+GF R    E A+  F++M+RN      FTYSS+  + + L +L   + +H+ ++
Sbjct: 221 WNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVI 280

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS+ +    VG++L++ Y K GS  DA +VF ++   D+V+WNSM+ A++Q G  ++A+ 
Sbjct: 281 KSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVS 340

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   G+     TFL +L+ACSH GLV++G++ FE M+KEY + PE  HY  +V LL
Sbjct: 341 HFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHYVTVVALL 399

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL+FI  +P++PTA +W  L AACR H + K+ +F +  + ELDPDD+   V
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPV 459

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G    A   R +MK   + KEP CSW+E+ N ++ F + + +H +  ++Y+
Sbjct: 460 LLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYK 519

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPA 729
              ++ ++I   G+            D EKE  + YHSE+LA+ F LI +PA
Sbjct: 520 MWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPA 571



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 47/431 (10%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C++ + LE  R+ HA +  +   GD F+  SL++MY KC  +     V  QM   D+
Sbjct: 58  ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+AGYA+N +  +A      +     +PN +T++++L   G+ +    G+Q+HA 
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHAL 177

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I+GF + GD E  
Sbjct: 178 AVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESA 237

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L     M  +G +   +T++   +S A L     G   HA VIK    L  FVG  ++DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDM 297

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +A+K    +  +   V+WN+ +  F +    +EA+  F +M ++    ++ T
Sbjct: 298 YAKSGSMIDARKVFDRV-DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQIT 356

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  IL ACS           H  +VK                        + +R F  + 
Sbjct: 357 FLCILTACS-----------HGGLVK------------------------EGKRYFEMMK 381

Query: 484 AAD----VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             D    +  + +++    + G    A++   KM +E   PT + + A+L+AC      +
Sbjct: 382 EYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPME---PTAAVWGALLAACRMHKNAK 438

Query: 540 DGQ----KVFE 546
            GQ     VFE
Sbjct: 439 VGQFAADHVFE 449



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LR + L+    + P    +   + +CA  +N       HA +     A   F+  +++ M
Sbjct: 36  LRDLDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHM 95

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y     + +A+    +M +    VSW + IAG+ +N    EAI     M++     + FT
Sbjct: 96  YCKCRSVLDARNVFDQM-RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFT 154

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++S+LKA        T  QIH+  VK  +  +V+VGS+L++ Y +CG  + A  VF +L 
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           + + VSWN++I  +++ G    A++ F +M+  G   T+ T+ +V S+ +  G ++ G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 544 VFESMVK 550
           V   ++K
Sbjct: 275 VHAHVIK 281



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S  +R   LE G+  HA + K+      FV  +L++MYAK G +     V  ++   D
Sbjct: 259 VFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKD 318

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           + + N +L  +A+  L  +A S F ++    V  N  T+  +L  C     + EGK+
Sbjct: 319 LVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 196/617 (31%), Positives = 337/617 (54%), Gaps = 14/617 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C +    +LG+  H  + K  +  D FV  +L+ MY +C  ++    V  +M   D
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + ++   ++N  FD A     +++ + V+P+     +M+ +    + +  GK +HA
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219

Query: 243 QTMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
             ++        V  + ALL MY KCG +  A  +F GL Q+ V+SWTA+I G  +    
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+  +L   M+E+ I PNE T    +  C       +G   HA +++ G ++   + TA+
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY    +I  A+  L +  ++   + W A ++ + +    ++A   F QM  +     
Sbjct: 340 VDMYGKCSDIRNARA-LFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPT 398

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + T  S+L  C++  +L   + +HS I K + E +  + ++L++ Y KCG    A R+F 
Sbjct: 399 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 458

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +  + D+  WN++I  ++ +G   +A+ +F +M  +G++P + TF+ +L ACSH+GLV +
Sbjct: 459 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 518

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+K+FE MV  +G++P+  HY CMVDLLGRAG L+ A   I ++PIKP   +W  L AAC
Sbjct: 519 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H + ++ E  + Q+LE++P++    V +SN+YA A   +DA   RK MK   + KEPG
Sbjct: 579 RLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPG 638

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
            S IEV   ++ F   ++SH ++ ++ E L ++ +++ + G+            + EKE 
Sbjct: 639 HSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKET 698

Query: 710 RVLYHSERLAVGFGLIS 726
            + YHSE+LA+ FGLIS
Sbjct: 699 ALTYHSEKLAMAFGLIS 715



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 175/336 (52%), Gaps = 3/336 (0%)

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           ++   ++L  CG +S    GK++H   +K        V NAL+ MY +C  +E A  VF+
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +++R+V+SW+ +I    ++ +++  L L+  M    + P+E      +   A   N  M
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 338 GYMFHAQVIK--RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           G   HA VI+      +G    TA++DMY+  G +  A++    + +  + VSW A IAG
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQK-TVVSWTAMIAG 272

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             R+ + EE  + F +M   +   +E T  S++  C    +L   +Q+H+ I+++ F  +
Sbjct: 273 CIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + + ++L++ Y KC    +A  +F      DV+ W +M+ AY+Q     +A  LF++M  
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            G+RPT  T +++LS C+ +G +  G+ V   + KE
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 428



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 114/236 (48%), Gaps = 18/236 (7%)

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           F   S+LKAC  +      ++IH  ++K   + +V VG++L+  Y +C   E A  VF +
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVVSW++MI++ S+N     A+ L  +M    +RP+    +++++  + +  ++ G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 542 QKVFESMVK----EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           + +   +++    E+  +P     + ++D+  + G L +A    + L  K T   W  + 
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTT---TALLDMYAKCGHLGLARQLFNGLTQK-TVVSWTAMI 270

Query: 598 AAC----RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           A C    R     K+  FI  Q   + P++    +T+ ++  E G     +  ++L
Sbjct: 271 AGCIRSNRLEEGTKL--FIRMQEENIFPNE----ITMLSLIVECGFTGALQLGKQL 320


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 185/532 (34%), Positives = 308/532 (57%), Gaps = 13/532 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           LD  ++ P    Y T +  C     +++ +++HA     ++     + N+L+ +Y KCG 
Sbjct: 42  LDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGS 101

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + +A  VF+ + +++++SWT++I G+ Q+   E+ + L+  M +    PN +TF   L +
Sbjct: 102 VLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
             +  +S +G   HA  +K       +VG+A++DMY+  G +  A     ++  S + VS
Sbjct: 162 AGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKL-DSKNGVS 220

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I+GF R    E A+  F++M+RN      FTYSS+  + + L +L   + +H+ ++
Sbjct: 221 WNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMI 280

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS+ +     G++L++ Y K GS  DA +VF ++   D+V+WN+M+ A++Q G  ++A+ 
Sbjct: 281 KSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVS 340

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GI     TFL +L+ACSH GLV++G++ FE M+KEY + PE  H+  +V LL
Sbjct: 341 HFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE-MMKEYDLEPEIDHFVTVVALL 399

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL+FI  +PI+PTA +W  L AACR H + K+ +F +  + ELDPDD+   V
Sbjct: 400 GRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPV 459

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G    A   R++MK   + KEP CSW+E+ N ++ F + + +H    ++Y+
Sbjct: 460 LLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYK 519

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPA 729
              Q+ ++I   G+            D E+E  + YHSE+LA+ F LI +PA
Sbjct: 520 MWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPA 571



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 203/431 (47%), Gaps = 47/431 (10%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C++ + LE  R+ HA +  +   GD F+  SL+++Y KCG +     V  +M   D+
Sbjct: 58  ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+AGYA+N + ++A      +     +PN +T++++L   G+ +    G+Q+HA 
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHAL 177

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  +     V +ALL MY +CGMM+ A +VF+ L  +N +SW A+I+GF + GD E  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L     M  +G +   +T++   +S A L     G   HA +IK    +  F G  ++DM
Sbjct: 238 LMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDM 297

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +A+K    +      V+WN  +  F +    +EA+  F +M ++    ++ T
Sbjct: 298 YAKSGSMIDARKVFDRV-DDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVT 356

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  IL ACS           H  +VK                        + +R F  + 
Sbjct: 357 FLCILTACS-----------HGGLVK------------------------EGKRYFEMMK 381

Query: 484 AAD----VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             D    +  + +++    + G    A++   KM +E   PT + + A+L+AC      +
Sbjct: 382 EYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIE---PTAAVWGALLAACRMHKNAK 438

Query: 540 DGQ----KVFE 546
            GQ     VFE
Sbjct: 439 VGQFAADHVFE 449



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 138/271 (50%), Gaps = 2/271 (0%)

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LR + L+    + P    +   + +CA  +N       HA +     A   F+  +++ +
Sbjct: 36  LRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHL 95

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G + EA+K   EM +    VSW + IAG+ +N   EEAI     M++     + FT
Sbjct: 96  YCKCGSVLEARKVFDEM-RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFT 154

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++S+LKA           QIH+  VK  +  +V+VGS+L++ Y +CG  + A  VF +L 
Sbjct: 155 FASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD 214

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           + + VSWN++I  +++ G    A++ F +M+  G   T+ T+ +V S+ +  G ++ G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           V   M+K    +   A  + ++D+  ++G +
Sbjct: 275 VHAHMIKSRQKMTAFAG-NTLLDMYAKSGSM 304



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 16/227 (7%)

Query: 80  SRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCS------REECL 133
           S+NG S   ++   GF   G   T  +T      +L   F     +Y S      R   L
Sbjct: 215 SKNGVSW--NALISGFARKGDGETALMT---FAEMLRNGFEATHFTYSSVFSSIARLGAL 269

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           E G+  HA + K+      F   +L++MYAK G +     V  ++   D+ + N +L  +
Sbjct: 270 EQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAF 329

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+  L  +A S F ++    +  N  T+  +L  C     + EGK+ + + MK +Y  + 
Sbjct: 330 AQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKR-YFEMMK-EYDLEP 387

Query: 254 AVSN--ALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIINGFKQH 297
            + +   ++ +  + G++  A   +F+  ++     W A++   + H
Sbjct: 388 EIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMH 434


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 204/607 (33%), Positives = 332/607 (54%), Gaps = 16/607 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G+  HA +  TA   D  +  +L++ YAKCG +     V   MP+ +  S N L++G
Sbjct: 27  LSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA +    ++      L  +D   N Y  S  ++   ++ + D G+Q H   +K  +  +
Sbjct: 86  YASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NA+L MY +C  MEDA  VFE +   +  ++ ++ING+   G  +  L +V  M  
Sbjct: 143 RYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTG 202

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +    +  ++   L  CAS+++S +G   HAQ +K+ + L  +VG+A+VDMY     + +
Sbjct: 203 EAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHD 262

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A +   E+    + VSW A +  + +N+  E+A++ F  M       +EFTY+  L +C+
Sbjct: 263 ANRAF-EVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCA 321

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +L T   + + ++K+    ++ V ++L+  Y+K GS EDA RVF  +   DVVSWN 
Sbjct: 322 GLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNL 381

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +I  Y+ +G AR+ +  F  M+   + P+  TF+ VLSAC+  GLV +      +M+KE 
Sbjct: 382 IITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEV 441

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P + HY+CMV LL R G+L+ A  FI N  I      WR L  +C+ + +  +   +
Sbjct: 442 GITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGHRV 501

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++QIL+L+P D   YV LSNMYA+A       + RK M+ + + K PG SWI V + ++ 
Sbjct: 502 AEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDVHV 561

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F S+ K H +M ++ +KL++L+ QI+ IG+            D  KE+ ++YHSE+LA+ 
Sbjct: 562 FTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLALA 621

Query: 722 FGLISLP 728
           FGLI  P
Sbjct: 622 FGLIHTP 628


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/595 (32%), Positives = 335/595 (56%), Gaps = 5/595 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  +  VLS C   + LE G++ H  + ++ +  D  +    ++ Y KC  ++    + 
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S   ++AG  +N+    A   F+++  +   P+ +  +++L  CGSL A++
Sbjct: 301 DRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALE 360

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA  +K+   +   V N L+ MY KC  + DA  VF  +   +++S+ A+I G+ 
Sbjct: 361 KGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYS 420

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           +     + L L   MR     P    F   L   ASL +  +    H  +IK G++L +F
Sbjct: 421 RQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEF 480

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G+A++D+YS    + +A+   +E+ +    V W A  +G+ +  + EE+++ +  +  +
Sbjct: 481 AGSALIDVYSKCSRVGDARLVFEEI-QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMS 539

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EFT+++++ A S + SL   +Q H++++K  F+ +  V ++L++ Y K GS E+A
Sbjct: 540 RLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEA 599

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            + F      D   WNSMI  Y+Q+G A KA+ +FE M++EG++P   TF+ VLSACSH+
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GL+  G   F+SM  ++GI P   HY CMV LLGRAGKL  A  FI  +PIK  A +WR 
Sbjct: 660 GLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRS 718

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR   ++++  + ++  +  +P D+  YV LSN++A  G+  +    R+ M +  +
Sbjct: 719 LLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGV 778

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TDNEK 707
            KEPGCSWIEV N+I++F +++ +H +   +   L  L+ QI+  G+   TDN++
Sbjct: 779 VKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANTDNKQ 833



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 241/510 (47%), Gaps = 9/510 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C++   L    + H L+ K     D +V  SL++ Y K   I     +   +    
Sbjct: 147 VVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKT 206

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +   ++AGY+K      +   F ++    V P+ Y  S++L+ C  L  ++ GKQ+H 
Sbjct: 207 SFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHC 266

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++   +   ++ N  +  Y KC  ++    +F+ +V +NV+SWT +I G  Q+  +  
Sbjct: 267 YVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRD 326

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M   G +P+ +  T  L SC SL     G   HA  IK  +   DFV   ++D
Sbjct: 327 ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLID 386

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    + +A+K    M  +   VS+NA I G+ R  K  EA++ F +M  + ++    
Sbjct: 387 MYAKCDSLTDARKVFNLMA-AIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLL 445

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            + S+L   + L  L    QIH  I+K     +   GS+LI+ Y+KC    DA  VF ++
Sbjct: 446 IFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEI 505

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+V W +M   Y+Q     +++ L++ + +  ++P   TF AV++A S+   ++ GQ
Sbjct: 506 QDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQ 565

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F + V + G   +    + +VD+  ++G +E A     +   K TA  W  + A    
Sbjct: 566 Q-FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTA-CWNSMIATYAQ 623

Query: 603 HSDLKMA-EFISKQILE-LDPDDAAVYVTL 630
           H + + A +     I+E L P+    YVT 
Sbjct: 624 HGEAEKALQVFEDMIMEGLKPN----YVTF 649



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 251/510 (49%), Gaps = 16/510 (3%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK-L 209
           D F+  +L++ Y+K   +     +   M + ++ + + +++ Y  ++   +A   F++ +
Sbjct: 73  DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
              + +PN Y  ++++  C     ++   Q+H   +K  Y+    V  +L+  Y K   +
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACI 192

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +DA  +F+GL  +   +WT II G+ + G  +  L+L   M+E  + P++Y  +  L++C
Sbjct: 193 DDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSAC 252

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
             L+    G   H  V++ G+ +   +    +D Y    ++   +K    M    + VSW
Sbjct: 253 LMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM-VDKNVVSW 311

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
              IAG  +N    +A++ F +M R     D F  +S+L +C  L +L    Q+H+  +K
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIK 371

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              +++  V + LI+ Y KC S  DA +VF+ + A D+VS+N+MI+ YS+  +  +A+ L
Sbjct: 372 VNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDL 431

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +M +    PT   F+++L   +    ++   ++   ++ +YG+  +E   S ++D+  
Sbjct: 432 FREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQI-HGLIIKYGVSLDEFAGSALIDVYS 490

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----LKMAEFISKQILELDPDD-- 623
           +  ++  A +    +  K    +W  +F+     S+    LK+ + +  Q+  L P++  
Sbjct: 491 KCSRVGDARLVFEEIQDKDIV-VWTAMFSGYTQQSENEESLKLYKCL--QMSRLKPNEFT 547

Query: 624 -AAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            AAV    SN+   A L+   +   +++KM
Sbjct: 548 FAAVITAASNI---ASLRHGQQFHNQVIKM 574



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 435 PSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           P +  C++IHS+IV   F + ++ + ++L+ AY+K      A ++F  ++  ++V+W+SM
Sbjct: 52  PHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSM 111

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEY 552
           +  Y+ +    +A++LF + +       N   LA V+ AC+  G +    ++   +VK  
Sbjct: 112 VSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKG- 170

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G + +    + ++D   +   ++ A +    L +K T+  W  + A 
Sbjct: 171 GYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVK-TSFTWTTIIAG 216


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 210/633 (33%), Positives = 343/633 (54%), Gaps = 14/633 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++  L  C      +LG   HA I K+    D +V  +LV M+ + G +     +  ++ 
Sbjct: 115 LVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N ++AG+ +N L+++A  FF  L   +++P+  +  ++LA  G L  +  GK+
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  MK    S   + N L+ MY KC  +  A  VF+ ++ +++ISWT +I  + Q+  
Sbjct: 235 IHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNC 294

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           + + L+L+  ++  G+D +       L +C+ LR        H   +KRG++    +   
Sbjct: 295 HTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNM 353

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           I+D+Y+  G I  A +  + + K    VSW + I+ +  N    EA+  F  M       
Sbjct: 354 IIDVYADCGNINYATRMFESI-KCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEP 412

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  T  SIL A + L +L   ++IH  I +  F       +SL++ Y  CGS E+A +VF
Sbjct: 413 DSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF 472

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
               +  +V W +MI AY  +GR + A+ LF  M  + + P + TFLA+L ACSHSGL+ 
Sbjct: 473 ICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLIN 532

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+++ E+M  +Y + P   HY+C+VDLLGRA  LE A  F+ ++ I+PTA +W     A
Sbjct: 533 EGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGA 592

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR HS+ K+ E  ++++L+LDPD    YV +SN++A +G   D EE R  MK   + K P
Sbjct: 593 CRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNP 652

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-----------HTDNEKE 708
           GCSWIEV NK++ F  ++KSH E  K+Y+KL Q+ +++E  G           +   E++
Sbjct: 653 GCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEK 712

Query: 709 DRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
            ++LY HSERLA+ +GL+S         ++ L 
Sbjct: 713 VQMLYGHSERLAIAYGLMSTSEGTPIRITKNLR 745



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 256/551 (46%), Gaps = 18/551 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           VL  C   E +  G   H LI K       FV  SLV+MYAKC DI     +  +M    
Sbjct: 16  VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERN 75

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N +++ Y+ N    +A   F ++    V  N YT    L  C   S    G ++H
Sbjct: 76  DVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIH 135

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K   +    V+NAL+ M+++ G M  A  +F+ L +++ I+W ++I GF Q+G Y 
Sbjct: 136 AAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYN 195

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L+  C +++  + P+E +    LA+   L     G   HA  +K  +     +G  ++
Sbjct: 196 EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLI 255

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMYS    +  A     +M  +   +SW   IA + +N    EA++   ++       D 
Sbjct: 256 DMYSKCCCVAYAGLVFDKM-INKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDT 314

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
               S L ACS L  L+  +++H   +K    S++ + + +I+ Y  CG+   A R+F  
Sbjct: 315 MMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFES 373

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVVSW SMI  Y  NG A +A+ +F  M    + P + T +++LSA +    +  G
Sbjct: 374 IKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKG 433

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAAC 600
           +++   + ++ G + E +  + +VD+    G LE A  +FI       +  +W  +  A 
Sbjct: 434 KEIHGFIFRK-GFMLEGSTVNSLVDMYACCGSLENAYKVFICTRS--KSLVLWTTMINAY 490

Query: 601 RCHSDLKMA-EFISKQILE---LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             H   K A E  S  I+E   L PD    ++ L    + +GL  + +   + MK K   
Sbjct: 491 GMHGRGKAAVELFS--IMEDQKLIPDHIT-FLALLYACSHSGLINEGKRLLETMKCK-YQ 546

Query: 657 KEPGCSWIEVY 667
            EP   W E Y
Sbjct: 547 LEP---WPEHY 554



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 198/396 (50%), Gaps = 6/396 (1%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           + V  + +T+  +L  CG +  I  G ++H   +K  Y S   V+N+L++MY KC  +  
Sbjct: 4   LGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILG 63

Query: 272 AESVFEGLVQRN-VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           A  +F+ + +RN V+SW +II+ +  +G   + L L   M++ G+  N YT   AL +C 
Sbjct: 64  ARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACE 123

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                 +G   HA ++K    L  +V  A+V M+   G++  A +   E+ +   +++WN
Sbjct: 124 DSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEK-DNITWN 182

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + IAGF +N    EA++ F  +   +   DE +  SIL A   L  L   ++IH+  +K+
Sbjct: 183 SMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKN 242

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             +SN+ +G++LI+ Y+KC     A  VF ++   D++SW ++I AY+QN    +A+ L 
Sbjct: 243 WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLL 302

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            K+  +G+        + L ACS    +   ++V    +K    L +    + ++D+   
Sbjct: 303 RKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG--LSDLMMQNMIIDVYAD 360

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            G +  A     ++  K     W  +  +C  H+ L
Sbjct: 361 CGNINYATRMFESIKCKDVVS-WTSMI-SCYVHNGL 394



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 123/243 (50%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           MR  G+  + +TF   L +C  + + H G   H  +IK G     FV  ++V MY+   +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           I  A+K    M +    VSWN+ I+ +  N +  EA+  F +M +     + +T  + L+
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC          +IH+ I+KS    +V+V ++L+  + + G    A R+F +L   D ++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNSMI  ++QNG   +A+  F  +    ++P   + +++L+A    G + +G+++    +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 550 KEY 552
           K +
Sbjct: 241 KNW 243



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +I +L+   R   L  G+  HA   K  +  +  +  +L++MY+KC  +     V 
Sbjct: 212 DEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVF 271

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD--GIDVQPNHYTYSTMLAICGSLSA 233
            +M   D+ S   ++A YA+N    +A     K+   G+DV       ST+LA C  L  
Sbjct: 272 DKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVD-TMMIGSTLLA-CSGLRC 329

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +   K++H  T+K + LS   + N ++ +Y  CG +  A  +FE +  ++V+SWT++I+ 
Sbjct: 330 LSHAKEVHGYTLK-RGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISC 388

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  +G   + L +  LM+E  ++P+  T    L++ ASL   + G   H  + ++G  L 
Sbjct: 389 YVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLE 448

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                ++VDMY+  G +  A K      +S S V W   I  +  + + + A+E FS M 
Sbjct: 449 GSTVNSLVDMYACCGSLENAYKVFI-CTRSKSLVLWTTMINAYGMHGRGKAAVELFSIME 507

Query: 414 RNDAACDEFTYSSILKACS 432
                 D  T+ ++L ACS
Sbjct: 508 DQKLIPDHITFLALLYACS 526


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 200/589 (33%), Positives = 326/589 (55%), Gaps = 4/589 (0%)

Query: 123 VLSYCSREECLELGRRYHALITK---TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V +  +R      G   HA   K   ++   + FV+ +L+NMY K G I     V  QMP
Sbjct: 126 VFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP 185

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           + +  S   +++GYA     ++AF  F L L    ++ N +  + +L+       +  G 
Sbjct: 186 HRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGV 245

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           QLH   +K   +   +V N+L+TMY K   M+ A +VF    +RN I+W+A+I G+ Q+G
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNG 305

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           + +    +   M   G  P E+TF   L + + +    +G   H  ++K G     +V +
Sbjct: 306 EADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKS 365

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMY+  G   +AK    ++      V W A I G  +N + EEA+  +S+M +    
Sbjct: 366 ALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVM 425

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               T +S+L+AC+ L +L   +Q+H++I+K  F     VG++L   Y+KCG+ ED+  V
Sbjct: 426 PSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVV 485

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D++SWNS+I  +SQ+GR R A+ LFE+M +EGI P + TF+ VL ACSH GLV
Sbjct: 486 FRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLV 545

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             G   F +M K+YG++P+  HY+C+VD+L RAG+L+ A  FI ++ I     +WR +  
Sbjct: 546 DRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLG 605

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR   D  +  +  +Q++EL  +D++ Y+ LSN+YA      D E  R LM+++ +SK+
Sbjct: 606 ACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKD 665

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           PGCSW+E+ N++  F    + H E  K+  +L +L + ++D G+    K
Sbjct: 666 PGCSWVELNNQVNVFVVGEQQHPEAEKINVELIRLAKHMKDEGYRQTYK 714



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 225/507 (44%), Gaps = 70/507 (13%)

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKC--GMMEDAESVFEGLVQ--RNVISWTAIIN 292
           G  LH   +K    S T VSN+L+T Y      ++  A +VF  +    R+V SW +++N
Sbjct: 33  GDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLN 92

Query: 293 GFKQHGDYEKPLRLVCLMRE-----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
              +H    +PL  +   R      D + P  ++F     + A + ++  G + HA   K
Sbjct: 93  PLSRH----QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACK 148

Query: 348 RGMALGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
              + G    FV TA+++MY  LG I +A++   +M    ++VSW A ++G+   + +EE
Sbjct: 149 LPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQM-PHRNAVSWAAMVSGYATGKCSEE 207

Query: 405 AIEAFSQMVRNDAAC----DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           A E F  M++    C    +EF  +++L A S+   L    Q+H  ++K      V V +
Sbjct: 208 AFELFRLMLQE---CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVEN 264

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL+  Y K    + A  VF      + ++W++MI  Y+QNG A  A  +F +M   G  P
Sbjct: 265 SLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSP 324

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA--------- 571
           T  TF+ +L+A S  G +  G++    MVK  G   +    S +VD+  +          
Sbjct: 325 TEFTFVGILNASSDMGALVVGKQAHGLMVK-LGFERQVYVKSALVDMYAKCGCTGDAKDG 383

Query: 572 -----------------------GKLEIALIFISNLPIKPTAPIW---RPLFAACRCHSD 605
                                  G+ E AL+  S +  +   P +     +  AC C + 
Sbjct: 384 FHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAA 443

Query: 606 LKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
           L+  + +  QIL+       +V   LS MY++ G   D+    + M  ++I      SW 
Sbjct: 444 LEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDI-----ISW- 497

Query: 665 EVYNKIYRFFSQNKSHSEMPKVYEKLK 691
              N I   FSQ+    +   ++E++K
Sbjct: 498 ---NSIISGFSQHGRGRDALDLFEEMK 521



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 7/260 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+  S    L +G++ H L+ K       +V ++LV+MYAKCG          Q+  
Sbjct: 330 VGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYD 389

Query: 181 L-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           + D+     ++ G+ +N   ++A   + ++D   V P++ T +++L  C  L+A++ GKQ
Sbjct: 390 VDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQ 449

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHAQ +K  +    +V  AL TMY KCG +ED+  VF  +  R++ISW +II+GF QHG 
Sbjct: 450 LHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGR 509

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               L L   M+ +GI P+  TF   L +C     SHMG +       R M+  D+    
Sbjct: 510 GRDALDLFEEMKLEGIAPDHITFINVLCAC-----SHMGLVDRGWFYFRAMS-KDYGLIP 563

Query: 360 IVDMYSGLGEIWEAKKQLKE 379
            +D Y+ + +I     QLKE
Sbjct: 564 KLDHYACIVDILSRAGQLKE 583



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 8/187 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C+    LE G++ HA I K        V  +L  MY+KCG+++  + V ++MP
Sbjct: 431 VTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMP 490

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             DI S N +++G++++     A   F  +KL+GI   P+H T+  +L  C  +  +D G
Sbjct: 491 DRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGI--APDHITFINVLCACSHMGLVDRG 548

Query: 238 KQLHAQTMKLQY--LSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
              + + M   Y  + K      ++ +  + G +++A+   E + +      W  ++   
Sbjct: 549 -WFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGAC 607

Query: 295 KQHGDYE 301
           +   D++
Sbjct: 608 RSLRDFD 614


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 203/630 (32%), Positives = 348/630 (55%), Gaps = 13/630 (2%)

Query: 124 LSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           L  C R   L LGR  HA L+   A     F+   L+ MY+ C D+ S V +   MP  +
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L++G  +N++   A + F  +    + P  +  S+      +L+A   G QLH 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++L + ++  V++ L  MY K G++ +A  VF+ + Q++ ++WTA+I+G+ ++G+ E 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 303 PLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            +     MR +G +  +++     L++   L++  +    H+ V+K G      V  A+ 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+   ++  A + +K    S + VS  + I G+      E+A+  F ++ R     +E
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNE 323

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT+SS++K C++   L    Q+H+ ++K+   S+  V S+L++ Y KCG    + ++F +
Sbjct: 324 FTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKE 383

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +     ++WN+ I   +Q+G  R+AI  F++M   GIRP + TF+++L+ACSH+GLV +G
Sbjct: 384 IEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEG 443

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            K F SM   +GI P+  HYSC++D+ GRAG+L+ A  FI  +P+KP A  W  L  ACR
Sbjct: 444 LKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACR 503

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              + ++ E  +  +++L+PD+  V+V+LS +YA  G   D +  RKLM+   I K PG 
Sbjct: 504 MRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPGF 563

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SW++   K + F S++ SH +  K+YEKL++L ++I++ G+            D  K+  
Sbjct: 564 SWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQRI 623

Query: 711 VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + YHSER+AV F LIS+PA       + L 
Sbjct: 624 LRYHSERIAVAFALISMPATKPIIVKKNLR 653


>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 211/621 (33%), Positives = 337/621 (54%), Gaps = 18/621 (2%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGD--------QFVTASLVNMYA 163
           +SLL+   +  +L+ C R+  L LG   HA I K     D         F+  SL++MY+
Sbjct: 29  KSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYS 88

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQPNHYT 220
           KCG+ ++   V   MP  D  S N +++G+ +N  FD +F FF ++   + +  + +  T
Sbjct: 89  KCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKAT 148

Query: 221 YSTMLAICGSLS---AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +TML+ C  L    +    + +H       +  +  V NAL+T Y KC        VF+
Sbjct: 149 LTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFD 208

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSH 336
            +++RNV++WTA+I+G  Q+  YE  LRL   MR  G + PN  T+  +L +C+ L+   
Sbjct: 209 EMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLR 268

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H  + K GM     + +A++D+YS  G + +A  Q+ E  +    VS    +  F
Sbjct: 269 DGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSL-DAAWQIFESAEELDGVSLTVILVAF 327

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N   EEAI+ F++MV      D    S++L    +   LA  +QIHS I+K  F  N 
Sbjct: 328 AQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENP 387

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            VG+ L+  Y+KCG   D+  VF Q+T  + VSWNS+I A++++G   KA+  +E+M VE
Sbjct: 388 FVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVE 447

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+ PT+ TFL++L ACSH+GLV+ G ++ ESM  ++GI P   HY+C+VD+LGRAG L  
Sbjct: 448 GVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNE 507

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A  FI  LP      +W+ L  AC  H D +M ++ + ++    P   A YV ++N+Y+ 
Sbjct: 508 AKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSS 567

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
            G   +     K MK   ++KE G SWIE+  K+  F   +K H E   ++  L  L++ 
Sbjct: 568 EGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKH 627

Query: 697 IEDIGHTDNEKEDRVLYHSER 717
           ++D G+  ++K   +L++ E+
Sbjct: 628 LKDEGYVPDKK--FILFYLEQ 646


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 195/589 (33%), Positives = 317/589 (53%), Gaps = 47/589 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F   +L++ YAK G I+++ A   +MP+ D  S N  +AG++ N+   ++   F ++ 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +P  YT  ++L     L  +  GKQ+H   +   +L    + NAL  MY KCG +E
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F+ L ++N++SW  +I+G+ ++G  EK + L+  MR  G  P++ T +  +A+  
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAA-- 265

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                            Y   G + EA++   E  K    V W 
Sbjct: 266 ---------------------------------YCQCGRVDEARRVFSEF-KEKDIVCWT 291

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A + G+ +N + E+A+  F++M+      D +T SS++ +C+ L SL   + +H + + +
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              +N+ V S+LI+ Y+KCG  +DA  VF+ +   +VVSWN+MI   +QNG  + A+ LF
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E M+ +  +P N TF+ +LSAC H   ++ GQ+ F+S+  ++G+ P   HY+CMV+LLGR
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGR 471

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
            G++E A+  I N+   P   IW  L + C    D+  AE  ++ + ELDP  A  Y+ L
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SNMYA  G   D    R LMK K + K  G SWIE+ N+++RF S++++H E   +YEKL
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKL 591

Query: 691 KQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
             L+ ++++ G T N           EK   + +HSE+LA+ FGLI  P
Sbjct: 592 NMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKP 640



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 36/312 (11%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L+  ++   L  G++ H  I      G+ F+  +L +MYAKCG+I+    +   + 
Sbjct: 158 IVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLT 217

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N +++GYAKN   ++      ++      P+  T ST++A             
Sbjct: 218 KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA------------- 264

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
                                  Y +CG +++A  VF    +++++ WTA++ G+ ++G 
Sbjct: 265 ----------------------AYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGR 302

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  L L   M  + I+P+ YT +  ++SCA L + H G   H + I  G+     V +A
Sbjct: 303 EEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSA 362

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMYS  G I +A+     M  + + VSWNA I G  +N   ++A+E F  M++     
Sbjct: 363 LIDMYSKCGFIDDARSVFNLM-PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKP 421

Query: 420 DEFTYSSILKAC 431
           D  T+  IL AC
Sbjct: 422 DNVTFIGILSAC 433



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 85/179 (47%), Gaps = 2/179 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C++   L  G+  H       +  +  V+++L++MY+KCG I    +V   MP  +
Sbjct: 328 VVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRN 387

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ G A+N     A   F  +     +P++ T+  +L+ C   + I++G++   
Sbjct: 388 VVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFD 447

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGD 299
                  ++ T    A ++ +  + G +E A ++ + +    + + W+ +++     GD
Sbjct: 448 SISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGD 506


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 189/495 (38%), Positives = 292/495 (58%), Gaps = 17/495 (3%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L+ MY+K G++ DA+ VF+ +  RNV+SWT +I+ +      +K L  + LM  +G+ 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           PN +T++  L +C  L N       H  +IK G+    FV +A++D+YS  GE+  A + 
Sbjct: 64  PNMFTYSSVLRACDGLFNLRQ---LHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             EM  +   V W++ IAGF +N   +EA+  F +M R      + T +S+L+AC+ L  
Sbjct: 121 FDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLAL 179

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L    Q+H  ++K  ++ ++ + ++L++ Y KCGS EDA  VF ++   DV+SW++MI  
Sbjct: 180 LELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            +QNG +++A+ LFE M V GI+P   T + VL ACSH+GLV++G   F SM + +GI P
Sbjct: 238 LAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDP 297

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY CM+DLLGRAG+L  A+  I+ +  +P A  WR L  ACR H ++ +A   +KQI
Sbjct: 298 GREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQI 357

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           L LDP DA  YV LSN+YA      D  E R+ M  + I KEPGCSWIEV  +I+ F   
Sbjct: 358 LRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFILG 417

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLI 725
           ++SH ++ ++  +L QL+ ++  +G+  +           + +D + YHSE+LA+ FGL+
Sbjct: 418 DRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGLM 477

Query: 726 SLPAKNKFECSRTLE 740
           SLP        + L 
Sbjct: 478 SLPRGQTIRIRKNLR 492



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 31/356 (8%)

Query: 89  DSFPDGFIDDGCSNTVPVTCYSLESLLDK--QFVIEVLSYCSREECLELG---------- 136
           D  PD  +    S T  ++ YS   L DK  +F++ +L    R                 
Sbjct: 24  DKMPDRNV---VSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLF 80

Query: 137 --RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
             R+ H  I K  +  D FV ++L+++Y++ G++++ + V  +M   D+   + ++AG+A
Sbjct: 81  NLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFA 140

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N+  D+A   F ++          T +++L  C  L+ ++ G+Q+H   +K  Y     
Sbjct: 141 QNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLI 198

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           ++NALL MY KCG +EDA +VF  +V+++VISW+ +I G  Q+G  ++ L+L   M+  G
Sbjct: 199 LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG 258

Query: 315 IDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           I PN  T    L +C     SH G      Y FH+     G+  G      ++D+    G
Sbjct: 259 IKPNYVTIVGVLFAC-----SHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAG 313

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
            + EA   + EM     +V+W A +     ++  + AI A  Q++R D   D  TY
Sbjct: 314 RLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQ-DAGTY 368



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 175/380 (46%), Gaps = 39/380 (10%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+   L+NMY K G +     V  +MP  ++ S   +++ Y+   L D+A  F + +   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V+PN +TYS++L  C  L  +   +QLH   +K+   S   V +AL+ +Y + G +E+A
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+ +V  +++ W++II GF Q+ D ++ LRL   M+  G    + T T  L +C  L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G   H  V+K    L   +  A++DMY   G + +A      M +    +SW+  
Sbjct: 178 ALLELGRQVHVHVLKYDQDL--ILNNALLDMYCKCGSLEDANAVFVRMVEK-DVISWSTM 234

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAG  +N  ++EA++ F  M       +  T   +L ACS           H+ +V    
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACS-----------HAGLV---- 279

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E  ++   S+ E +      E                +  MI    + GR  +A+ L  +
Sbjct: 280 EEGLYYFHSMKELFGIDPGRE---------------HYGCMIDLLGRAGRLSEAVDLINE 324

Query: 513 MVVEGIRPTNSTFLAVLSAC 532
           M  E   P   T+ A+L+AC
Sbjct: 325 MECE---PDAVTWRALLNAC 341


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 199/577 (34%), Positives = 321/577 (55%), Gaps = 5/577 (0%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           + V  ++  CS+ + L  G   HA+  KTA   D  V+  ++N+YAKC  ++    V  +
Sbjct: 4   ELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDE 63

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           M   ++ S + +++GY +      A   F KL+   + PN Y Y+++++ C SL  + +G
Sbjct: 64  MSERNLVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQG 120

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           KQ+H Q +K    S + VSNAL+TMY+KCG   DA   +   ++ N +++ A+I GF ++
Sbjct: 121 KQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVEN 180

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
              +K   ++ +M +DG  P+ +TF   L +C S  +   G + H Q IK  +    F+G
Sbjct: 181 QQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIG 240

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-D 416
             I+ MYS L  + EA+K  + + +    +SWN  I+        E+A+EAF +M+    
Sbjct: 241 NLIITMYSKLNLLEEAEKAFRSI-EEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECR 299

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              DEFT++S L ACS L S+   +QIH  +++++   +V  G++LI  Y KCG    A 
Sbjct: 300 VRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAY 359

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +FS++   ++VSWN+MI  +  +G   KA  LF KM   G++P + TF+ +L+A +H+G
Sbjct: 360 YIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAG 419

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV +G   F SM + YGI PE  H+SC++DLLGRAG+L  A  ++   P      +   L
Sbjct: 420 LVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSL 479

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            +ACR H D+   +  ++Q+L+L P   + YV LSN+YA   +     E  KL+K   + 
Sbjct: 480 LSACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLK 539

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           KEPG S IEV     +F   + SHS + ++ + LK L
Sbjct: 540 KEPGHSLIEVNGTFEKFTVVDFSHSRIEEIMDMLKIL 576


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 195/581 (33%), Positives = 320/581 (55%), Gaps = 6/581 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  CS    + LG + H  + K+    + FV  SL++MY++ G+      V   +  
Sbjct: 14  VVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGC 73

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+   NC++  Y K     +A   F+ L  + + PN YT++ +++ C     ++EGKQL
Sbjct: 74  KDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN----VEEGKQL 129

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K   L +T+V NA++TMY K GM+E+A  +F  + ++N+ISWTA+I+G+ ++G  
Sbjct: 130 HGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYG 189

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           EK +     +R  G++ +       L  C+  +N  +G   H  VIK G      +GTA+
Sbjct: 190 EKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTAL 249

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF-SQMVRNDAAC 419
           +D+Y+       A+     +    S+ S+NA + GF  N   EE    F SQ+       
Sbjct: 250 IDLYAKCKNFQSARTVFNGL-SPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKP 308

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  ++S +L   +   SL     +H+  +K+ F  ++ V ++LI  Y KCG  EDA + F
Sbjct: 309 DSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAF 368

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + ++A D +SWN++I AYS +G+  KA++L+++M  +G  P   T L +L AC++SGL +
Sbjct: 369 NSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSGLSE 428

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           DG  +F +M  +YGI P   HY+CMVDLLGRAG L  A+  I+  P   +  +WR L   
Sbjct: 429 DGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNV 488

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+   DL + +  SK +L+L PD+A  YV +SN+YA  G+  +A + R  MK  ++SKE 
Sbjct: 489 CKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTMKDLKLSKEA 548

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
           G SW+E+ N ++ F +    H E  ++Y +L  L  ++  I
Sbjct: 549 GSSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNEMRGI 589



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 204/417 (48%), Gaps = 10/417 (2%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N +T   +L  C  +  +  G+Q+H   +K  +     V  +L++MY + G  ++AE VF
Sbjct: 9   NEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVF 68

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+  +++     +I  + + G  ++ + +   +   G+DPN+YTFT  +++C    N  
Sbjct: 69  NGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTC----NVE 124

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H   +K G+ L   VG A++ MY   G + EA +    M K  + +SW A I+G+
Sbjct: 125 EGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKK-NLISWTALISGY 183

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            RN   E+A++ F ++      CD    ++IL  CS   +L    QIH  ++K  +  ++
Sbjct: 184 TRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDI 243

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN-GRARKAIILFEKMVV 515
           ++G++LI+ Y KC +++ A  VF+ L+     S+N+++  + +N       ++   ++ +
Sbjct: 244 NIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRL 303

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
            GI+P + +F  +LS  ++   +  G+ +    +K  G     +  + ++ +  + G +E
Sbjct: 304 AGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKT-GFAGHISVSNALITMYAKCGIVE 362

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTL 630
            A    +++        W  + +A   H   + A  + +++ E    PD+  + V L
Sbjct: 363 DAYQAFNSMSANDCIS-WNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVIL 418



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 147/286 (51%), Gaps = 29/286 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID-DGCSNTVPV 106
           A ++F+   K+  +S + LI          G +RNGY  +     DGF++  GC     V
Sbjct: 161 AARMFSVMNKKNLISWTALI---------SGYTRNGYGEKA---VDGFLELRGCG----V 204

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
            C       D   +  +L  CS  + L+LG + H L+ K     D  +  +L+++YAKC 
Sbjct: 205 EC-------DSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCK 257

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF---LKLDGIDVQPNHYTYST 223
           + +S   V   +     AS N +L G+ +N   ++    F   L+L GI  +P+  ++S 
Sbjct: 258 NFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGI--KPDSVSFSR 315

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L++  + +++ +G+ LHA ++K  +    +VSNAL+TMY KCG++EDA   F  +   +
Sbjct: 316 LLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSAND 375

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            ISW AII+ +  HG  EK L L   M E G  P+E T  V L +C
Sbjct: 376 CISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQAC 421



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 6/281 (2%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M E G   NE+T  V L +C+ + +  +G   H  VIK G     FVGT+++ MYS  G 
Sbjct: 1   MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
             EA+K    +G        N  I  + +    + AI  F  ++      +++T+++I+ 
Sbjct: 61  FDEAEKVFNGVG-CKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIIS 119

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
            C++       +Q+H   VK        VG+++I  Y K G  E+A R+FS +   +++S
Sbjct: 120 TCNVEEG----KQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLIS 175

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W ++I  Y++NG   KA+  F ++   G+   +     +L  CS    +  G ++   +V
Sbjct: 176 WTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQI-HGLV 234

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
            + G   +    + ++DL  +    + A    + L  + TA
Sbjct: 235 IKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTA 275


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 184/537 (34%), Positives = 311/537 (57%), Gaps = 14/537 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAES 274
           P++  YS +L  C  L  +++G+ +HA  +   +L    V  N ++ MY KCG ++DA  
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F+ +  +++++WTA+I GF Q+      L L   M   G+ PN +T +  L +  S   
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   HA  +K G     +VG+A+VDMY+  G +  A+     M  + S VSWNA I+
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM-PTKSEVSWNALIS 263

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G  R  + E A+    +M R +     FTYSS+  AC+ + +L   + +H+ ++KS  + 
Sbjct: 264 GHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKL 323

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
              +G++L++ Y K GS +DA+RVF +L   DVVSWN+M+   +Q+G  ++ +  FE+M+
Sbjct: 324 IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQML 383

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             GI P   +FL VL+ACSHSGL+ +G   FE ++K+Y + P+  HY   VDLLGR G L
Sbjct: 384 RIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + A  FI  +PI+PTA +W  L  ACR H ++++  + +++  ELDP D+   + LSN+Y
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIY 502

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           A AG   D  + RK+MK   + K+P CSW+E+ N ++ F + +++H ++ ++  K +++ 
Sbjct: 503 ASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEIS 562

Query: 695 QQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +I++IG+  +           E+E+++ YHSE+LA+ F L++ P  +     + + 
Sbjct: 563 GKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIR 619



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 252/552 (45%), Gaps = 57/552 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASL-VNMYAKCGDIKSMVAV 174
           D     ++L  C+R   +E GR  HA +  +    +  V  ++ VNMYAKCG +     +
Sbjct: 86  DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +MP  D+ +   L+AG+++N     A   F ++  + +QPNH+T S++L   GS   +
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL 205

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D G QLHA  +K  Y S   V +AL+ MY +CG M+ A+  F+G+  ++ +SW A+I+G 
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G+ E  L L+  M+     P  +T++   ++CAS+     G   HA +IK G+ L  
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F+G  ++DMY+  G I +AK+    + K    VSWN  + G  ++   +E ++ F QM+R
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +E ++  +L ACS    L         + K K E +V    + ++   + G  + 
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 475 AERVFSQLTAADVVS-WNSMIKA----------------------------------YSQ 499
           AER   ++      + W +++ A                                  Y+ 
Sbjct: 445 AERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYAS 504

Query: 500 NGRARKAIILFEKMVVEGIRPT---------NSTFLAVLSACSHSGL--VQDGQKVFESM 548
            GR R    + + M   G++           N+  L V +  +H  +  ++   +     
Sbjct: 505 AGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGK 564

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRC 602
           +KE G +P+ +H    VD   R  KL+     +AL F + N P      I + +     C
Sbjct: 565 IKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDC 624

Query: 603 HSDLKMAEFISK 614
           H+ +K   F+SK
Sbjct: 625 HAAIK---FVSK 633



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI- 463
            + A   + R     D   YS +LK C+ L  +     +H+ +V S F  N  V  ++I 
Sbjct: 71  GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y KCG  +DA R+F ++   D+V+W ++I  +SQN R R A++LF +M+  G++P + 
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           T  ++L A      +  G ++    +K YG        S +VD+  R G ++ A +    
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 584 LPIK----------------------------------PTAPIWRPLFAACRCHSDLKMA 609
           +P K                                  PT   +  +F+AC     L+  
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309

Query: 610 EFISKQILELDPDDAA-VYVTLSNMYAEAGLQADAEE 645
           +++   +++      A +  TL +MYA+AG   DA+ 
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 185/537 (34%), Positives = 310/537 (57%), Gaps = 14/537 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAES 274
           P++  YS +L  C  L  +++G+ +HA  +   +L    V  N ++ MY KCG ++DA  
Sbjct: 85  PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARR 144

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F+ +  +++++WTA+I GF Q+      L L   M   G  PN +T +  L +  S   
Sbjct: 145 MFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHG 204

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   HA  +K G     +VG+A+VDMY+  G +  A+     M  + S VSWNA I+
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM-PTKSEVSWNALIS 263

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G  R  + E A+    +M R +     FTYSS+L AC+ + +L   + +H+ ++KS  + 
Sbjct: 264 GHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKL 323

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
              +G++L++ Y K GS +DA+RVF +L   DVVSWN+M+   +Q+G  ++ +  FE+M+
Sbjct: 324 IAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQML 383

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             GI P   +FL VL+ACSHSGL+ +G   FE ++K+Y + P+  HY   VDLLGR G L
Sbjct: 384 RIGIEPNEISFLCVLTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLL 442

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + A  FI  +PI+PTA +W  L  ACR H ++++  + +++  ELDP D+   + LSN+Y
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIY 502

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           A AG   D  + RK+MK   + K+P CSW+E+ N ++ F + +++H  + ++  K +++ 
Sbjct: 503 ASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEIS 562

Query: 695 QQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +I++IG+  +           E+E+++ YHSE+LA+ F L++ P  +     + + 
Sbjct: 563 GKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIR 619



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 253/554 (45%), Gaps = 57/554 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASL-VNMYAKCGDIKSMVAV 174
           D     ++L  C+R   +E GR  HA +  +    +  V  ++ VNMYAKCG +     +
Sbjct: 86  DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +MP  D+ +   L+AG+++N     A   F ++  +  QPNH+T S++L   GS   +
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL 205

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D G QLHA  +K  Y S   V +AL+ MY +CG M+ A+  F+G+  ++ +SW A+I+G 
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G+ E  L L+  M+     P  +T++  L++CAS+     G   HA +IK G+ L  
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIA 325

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F+G  ++DMY+  G I +AK+    + K    VSWN  + G  ++   +E ++ F QM+R
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVK-PDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +E ++  +L ACS    L         + K K E +V    + ++   + G  + 
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDR 444

Query: 475 AERVFSQLTAADVVS-WNSMIKA----------------------------------YSQ 499
           AER   ++      + W +++ A                                  Y+ 
Sbjct: 445 AERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYAS 504

Query: 500 NGRARKAIILFEKMVVEGIRPT---------NSTFLAVLSACSHSGL--VQDGQKVFESM 548
            GR R    + + M   G++           N+  L V +  +H  +  ++   +     
Sbjct: 505 AGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGK 564

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRC 602
           +KE G +P+ +H    VD   R  KL+     +AL F + N P      I + +     C
Sbjct: 565 IKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDC 624

Query: 603 HSDLKMAEFISKQI 616
           H+ +K   F+SK +
Sbjct: 625 HAAIK---FVSKVV 635



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 122/259 (47%), Gaps = 11/259 (4%)

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           LRNS    +F+A VI++ +      G A +  ++      ++     E G +AS   +  
Sbjct: 3   LRNS---TLFNAAVIRKILVRSPPSGFATI--HAPAAPFSDSNDSEVEDGDAASFCVF-- 55

Query: 392 QIAGFFRNQKTE--EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           Q     R  +++    + A   + R     D   YS +LK C+ L  +     +H+ +V 
Sbjct: 56  QDKDLLRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVD 115

Query: 450 SKFESNVHVGSSLI-EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           S F  N  V  ++I   Y KCG  +DA R+F ++   D+V+W ++I  +SQN R R A++
Sbjct: 116 SHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALL 175

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF +M+  G +P + T  ++L A      +  G ++    +K YG        S +VD+ 
Sbjct: 176 LFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMY 234

Query: 569 GRAGKLEIALIFISNLPIK 587
            R G ++ A +    +P K
Sbjct: 235 ARCGHMDAAQLAFDGMPTK 253


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 206/601 (34%), Positives = 322/601 (53%), Gaps = 12/601 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H+ I K     + FV A+L+N Y+ CG + S  +V + +   DI     +++ Y +N  F
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCF 228

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + +     ++      PN+YT+ T L     L A    K +H Q +K  Y     V   L
Sbjct: 229 EDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGL 288

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L +Y + G M DA  VF  + + +V+ W+ +I  F Q+G   K + +   MRE  + PNE
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNE 348

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +T +  L  CA  + S +G   H  V+K G  L  +V  A++D+Y+   ++  A K   E
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +  S + VSWN  I G+    +  +A+  F + +RN  +  E T+SS L AC+ L S+  
Sbjct: 409 L-SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMEL 467

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+H   +K+     V V +SLI+ Y KCG  + A+ VF+++   DV SWN++I  YS 
Sbjct: 468 GVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYST 527

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G  R+A+ +F+ M     +P   TFL VLS CS++GL+  GQ  FESM+ ++GI P   
Sbjct: 528 HGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLE 587

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+CMV L GR+G+L+ A+  I  +P +P+  IWR + +A     + + A   +++IL++
Sbjct: 588 HYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKI 647

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P D A YV LSNMYA A   A+    RK MK K + KEPG SWIE    ++ F   +  
Sbjct: 648 NPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSD 707

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           H +M  +   L+ L  +    G+            D EK+ R+  HSERLA+ +GL+ +P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767

Query: 729 A 729
           +
Sbjct: 768 S 768



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 237/490 (48%), Gaps = 7/490 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      +L  C R+      +  H  I K   C D F T  L+N Y K G  K  + +
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +MP  +  S   L  GYA           + +L     + N + +++ L +  SL   
Sbjct: 107 FDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           +    LH+  +KL Y S   V  AL+  Y  CG ++ A SVFEG++ ++++ W  I++ +
Sbjct: 163 EICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCY 222

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            ++G +E  L+L+  M  DG  PN YTF  AL +   L   H     H Q++K    L  
Sbjct: 223 VENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            VG  ++ +Y+ LG++ +A K   EM K+   V W+  IA F +N    +A++ F +M  
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIARFCQNGFCNKAVDIFIRMRE 341

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +EFT SSIL  C++       EQ+H  +VK  F+ +V+V ++LI+ Y KC   + 
Sbjct: 342 GFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A ++F++L++ +VVSWN++I  Y   G   KA+ +F + +   +  T  TF + L AC+ 
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              ++ G +V    +K        A  + ++D+  + G +++A    + +     A  W 
Sbjct: 462 LASMELGVQVHGLAIKTNNA-KRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS-WN 519

Query: 595 PLFAACRCHS 604
            L +    H 
Sbjct: 520 ALISGYSTHG 529



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 167/347 (48%), Gaps = 10/347 (2%)

Query: 87  RNDSFPDGFI------DDGCSNTVPVTCYSLES-LLDKQFVIE-VLSYCSREECLELGRR 138
           +ND  P  F+      +  C+  V +     E  ++  +F +  +L+ C+  +C  LG +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQ 369

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H L+ K     D +V+ +L+++YAKC  + + V +  ++   ++ S N ++ GY     
Sbjct: 370 LHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGE 429

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             +A + F +     V     T+S+ L  C SL++++ G Q+H   +K     + AVSN+
Sbjct: 430 GGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNS 489

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY KCG ++ A++VF  +   +V SW A+I+G+  HG   + LR+  +M+     PN
Sbjct: 490 LIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPN 549

Query: 319 EYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             TF   L+ C++      G   F + +   G+       T +V ++   G++ +A   +
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLI 609

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           + +    S + W A ++    NQ  EE     ++ +      DE TY
Sbjct: 610 EGIPYEPSVMIWRAMLSASM-NQYNEEFARRSAEEILKINPKDEATY 655


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 198/628 (31%), Positives = 328/628 (52%), Gaps = 11/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L  G+  H  +       + F    +VNMYAKC  ++    +  +MP  D
Sbjct: 181 LLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERD 240

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +++GYA+N     A    L++     +P+  T  ++L     + ++  G+ +H 
Sbjct: 241 LVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHG 300

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            +M+  + S   VS AL+ MY KCG +  A  +F+ +  + V+SW ++I+G+ Q+GD   
Sbjct: 301 YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA 360

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   M ++ ++    T   AL +CA L +   G   H  + +  +     V  +++ 
Sbjct: 361 AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLIS 420

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    + +   ++ E  +  + VSWNA I G+ +N +  EAI+ F +M   +   D F
Sbjct: 421 MYSKCKRV-DIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSF 479

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S++ A + L  L   + IH  ++++  + NV V ++L++ Y KCG+   A ++F  +
Sbjct: 480 TMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMM 539

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               V +WN+MI  Y  +G  + A+ LFEKM  E I+P   TFL VLSACSHSGLV++G 
Sbjct: 540 DERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGF 599

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM K+YG+ P   HY  MVDLLGRA +L  A  FI  +PI+P   ++  +  ACR 
Sbjct: 600 QYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRI 659

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  + +I +LDPDD   +V L+N+YA A +       R  M+ K I K PG S
Sbjct: 660 HKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWS 719

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
            +E+ N+++ F+S   SH +  K+Y  L+ L  +I+  G+           D  KE  + 
Sbjct: 720 VVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSVHDVEDVVKEQLLN 779

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LA+ F L++          + L 
Sbjct: 780 SHSEKLAIAFSLLNTSPGTTIHLRKNLR 807



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 203/393 (51%), Gaps = 3/393 (0%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
           LI K  +  +      LV+++ K G +     V + +        + +L GYA+N+  D 
Sbjct: 99  LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A SFF ++    V+P  Y ++ +L +CG  + + +GK++H Q +   + S       ++ 
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KC ++E+A  +F+ + +R+++ W  II+G+ Q+G  +  L LV  M+E+G  P+  T
Sbjct: 219 MYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSIT 278

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM- 380
               L + A + +  +G   H   ++ G      V TA+VDMYS  G +  A+     M 
Sbjct: 279 IVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMT 338

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
           GK+   VSWN+ I G+ +N     A+E F +M+         T    L AC+ L  +   
Sbjct: 339 GKTV--VSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG 396

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
             +H  + + +  S+V V +SLI  Y+KC   + A  +F  L    +VSWN+MI  Y+QN
Sbjct: 397 RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQN 456

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           GR  +AI  F KM ++ I+P + T ++V+ A +
Sbjct: 457 GRINEAIDYFCKMQLQNIKPDSFTMVSVIPALA 489



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 195/412 (47%), Gaps = 11/412 (2%)

Query: 216 PNH---YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           P+H   +  + +L +C S+    E  Q     +K    S+      L++++ K G + +A
Sbjct: 72  PSHVYKHPSAILLELCTSMK---ELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEA 128

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+ +  +    +  ++ G+ ++   +  +   C MR DG+ P  Y FT  L  C   
Sbjct: 129 ARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDN 188

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H Q+I  G A   F  T +V+MY+    + EA K    M +    V WN  
Sbjct: 189 ADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPER-DLVCWNTI 247

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G+ +N   + A+E   +M       D  T  SIL A + + SL     IH   +++ F
Sbjct: 248 ISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGF 307

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           ES V+V ++L++ Y+KCGS   A  +F ++T   VVSWNSMI  Y QNG    A+ +F+K
Sbjct: 308 ESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQK 367

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+ E +  TN T +  L AC+  G V+ G+ V   ++ +  +  + +  + ++ +  +  
Sbjct: 368 MMDEQVEMTNVTVMGALHACADLGDVEQGRFV-HKLLDQLELGSDVSVMNSLISMYSKCK 426

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILELDPD 622
           +++IA     NL  K T   W  +      +  +  A   F   Q+  + PD
Sbjct: 427 RVDIAAEIFENLQHK-TLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPD 477


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 204/590 (34%), Positives = 345/590 (58%), Gaps = 23/590 (3%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+T  +VNMYAKCG +     +  +MP  +I S   L++GYA++   ++ F  F  +  I
Sbjct: 101 FLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGML-I 159

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK-CGMMED 271
             QP  + ++++++ CG     + G+Q+HA  +K  + S   V NAL+ MY K CG  ++
Sbjct: 160 WHQPTEFAFASVISACGGDD--NCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADE 217

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A +V+E +  RN++SW ++I GF+  G   + L L   M   GI  +  T  V++ SC  
Sbjct: 218 AWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATL-VSIFSCLC 276

Query: 332 LRNSHMGYMFHAQ--VIKRGMALGDFVGTAIVDMYSGLG-EIWEAKKQLKEMGKSASSVS 388
                +   F  Q   IK G  L   V TA+V  YS LG E+ +  +   E+      VS
Sbjct: 277 GMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVS 336

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W   IA F   +  ++A+  F Q +R   A D   +S +LKAC+ L +      + S ++
Sbjct: 337 WTGIIAAF-AERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVL 395

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  FE ++ + ++LI A  +CGS   +++VF ++ + D VSWNSM+KAY+ +G+ ++A++
Sbjct: 396 KVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALL 455

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF +M  +   P  +TF+A+LSACSH+G+ ++G K+FE+M   +GI+P+  HY+CMVD+L
Sbjct: 456 LFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDIL 512

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG++  A   I  +P++P + +W  L  +CR H + K+A+  + ++ ELDP+++  YV
Sbjct: 513 GRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYV 572

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            +SN++   G   +A   R+ M+ K + KEPG SWIEV N+++ F S  + H E   +  
Sbjct: 573 LMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICA 632

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISL 727
           +L++L+++++D+G+            D  KE+++ YHSE+LA+ F L+++
Sbjct: 633 RLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNV 682



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 209/447 (46%), Gaps = 30/447 (6%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS--KTAVSNALLTMYIKCGMMEDAES 274
           +H+TY+ +   C   S++ EG+ LH         S     ++N ++ MY KCG ++ A  
Sbjct: 62  SHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQ 121

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI--DPNEYTFTVALASCASL 332
           +F+ + ++N++SWTA+++G+ QHG   +  R   + R   I   P E+ F   +++C   
Sbjct: 122 MFDEMPEKNIVSWTALVSGYAQHGRSNECFR---VFRGMLIWHQPTEFAFASVISACGGD 178

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY----SGLGEIWEAKKQLKEMGKSASSVS 388
            N   G   HA  +K       +VG A++ MY     G  E W      + MG   + VS
Sbjct: 179 DNC--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNV---YEAMGFR-NLVS 232

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA-CSLLPSLATCEQIHSRI 447
           WN+ IAGF        A+E FSQM       D  T  SI    C +   L  C Q+    
Sbjct: 233 WNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLT 292

Query: 448 VKSKFESNVHVGSSLIEAYNKCGS-WEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARK 505
           +K+ F   + V ++L++AY+  G    D  R+F +L    DVVSW  +I A+++    +K
Sbjct: 293 IKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKK 351

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV-FESMVKEYGILPEEAHYSCM 564
           A+++F + + E + P    F  VL AC  +GL  +   +  +S V + G   +    + +
Sbjct: 352 ALVIFRQFLRECLAPDRHMFSIVLKAC--AGLATERHALTVQSHVLKVGFEDDIVLANAL 409

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           +    R G + ++      +  + T   W  +  A   H   K A  +  Q ++  P D 
Sbjct: 410 IHACARCGSVALSKQVFDKMGSRDTVS-WNSMLKAYAMHGQGKEALLLFSQ-MDAQP-DG 466

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMK 651
           A +V L +  + AG+   AEE  K+ +
Sbjct: 467 ATFVALLSACSHAGM---AEEGAKIFE 490


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 199/577 (34%), Positives = 317/577 (54%), Gaps = 3/577 (0%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           +L DK     V+  C     + LGR  H  I       D FV +SL+  Y++ G I    
Sbjct: 143 TLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDAR 202

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +  +MP  D    N +L GY KN  +D A   F+++   +  PN  T++ +L++C S  
Sbjct: 203 YLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262

Query: 233 AIDEGKQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
            I+ G QLH   +   L+  S  A + AL+ +Y KC  +E A  +F+     +++  TA+
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAM 322

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G+  +G     L +   + ++ +  N  T    L +CA L    +G   H  ++K G 
Sbjct: 323 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 382

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               +VG+AI+DMY+  G +  A +    +     +V WN+ I    +N K EEAI+ F 
Sbjct: 383 GGSCYVGSAIMDMYAKCGRLDLAHQTFIGI-SDKDAVCWNSMITSCSQNGKPEEAIDLFR 441

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           QM       D  + S+ L AC+ LP+L   ++IH+ +++  F S++   S+LI+ Y+KCG
Sbjct: 442 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 501

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + + A RVF  +   + VSWNS+I AY  +GR + ++ LF  M+ +GI+P + TFLA++S
Sbjct: 502 NLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 561

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC H+G V +G   F  M +E GI+    HY+CMVDL GRAG+L  A   I+++P  P A
Sbjct: 562 ACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDA 621

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +W  L  ACR H ++++AE  S+ + +LDP ++  YV LSN++A AG      + R LM
Sbjct: 622 GVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLM 681

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           K + + K PGCSWI+V N  + F + ++SH +  ++Y
Sbjct: 682 KERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIY 718



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 236/490 (48%), Gaps = 5/490 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+    L  GR+ HA +    +  +  +   L+ MY  CG       +  Q+ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                  N ++ G+     FD A  F+ K+ G    P+ YT+  ++  CG L+++  G+ 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H +   + +     V ++L+  Y + G + DA  +F+ +  ++ + W  ++NG+ ++GD
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT- 358
           ++    +   MR    +PN  TF   L+ CAS    + G   H  V+  G+ +   V   
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 359 -AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A++D+Y    ++ E  +++ +       V   A I+G+  N     A+E F  +++   
Sbjct: 289 FALIDIYFKCRDV-EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 347

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T +S+L AC+ L +L   +++H  I+K+    + +VGS++++ Y KCG  + A +
Sbjct: 348 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 407

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F  ++  D V WNSMI + SQNG+  +AI LF +M + G +    +  A LSAC++   
Sbjct: 408 TFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 467

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           +  G+++   M++      +    S ++D+  + G L++A      +  K     W  + 
Sbjct: 468 LHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS-WNSII 525

Query: 598 AACRCHSDLK 607
           AA   H  LK
Sbjct: 526 AAYGNHGRLK 535


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 196/568 (34%), Positives = 317/568 (55%), Gaps = 4/568 (0%)

Query: 136 GRRYHALITK-TAVCGDQ--FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           G   HAL  K  + CG    FV+ +L+NMY K G +     V   M + +  S   +++G
Sbjct: 139 GAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSG 198

Query: 193 YAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           YA     ++AF  F L L    ++ N +  + +L+       +  G QLH   +K   + 
Sbjct: 199 YATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVG 258

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             +V N+L+TMY K   M+ A  VF    +RN I+W+A+I G+ Q+G+     R+   M 
Sbjct: 259 FVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMH 318

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G  P E+TF   L +C+ +    +G   H  ++K G     +V +A+VDMY+  G I 
Sbjct: 319 SSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIG 378

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +AK    ++      V W A I G  +N + EEA+  +S+M +        T +S+L+AC
Sbjct: 379 DAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRAC 438

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L +L   +Q+H++I+K +F     VG++L   Y+KCG+ ED+  VF ++   DV+SWN
Sbjct: 439 ACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWN 498

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           S+I  +SQ+GR   A+ +FE+M +EG  P + TF+ +LSACSH GLV  G   F +M K+
Sbjct: 499 SIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKD 558

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           Y ++P   HY+CMVD+L RAG+L+ A  FI ++ I     +WR +  ACR   D  +  +
Sbjct: 559 YNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAY 618

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             +Q++EL  +D++ Y+ LSN+YA      D E  R LM+++ +SK+ GCSW+E+YN+++
Sbjct: 619 AGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVH 678

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIED 699
            F    + H E   +  +L +L + ++D
Sbjct: 679 VFVVGEQQHPEAENINVELIRLAKHMKD 706



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 2/311 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  S    L +G + H L+ K  + G   V  SLV MYAK   + + + V       +
Sbjct: 231 VLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERN 290

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + + ++ GYA+N   + A   FL++      P  +T+  +L  C  + A+  GKQ H 
Sbjct: 291 SITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHC 350

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYE 301
             +KL + ++  V +AL+ MY KCG + DA+  F  L    +V+ WTA+I G  Q+G++E
Sbjct: 351 LMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHE 410

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M + GI P+  T T  L +CA L    +G   HAQ++K   +LG  VGTA+ 
Sbjct: 411 EALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALS 470

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS  G + ++    + M      +SWN+ I+ F ++ +  +A++ F +M     A D 
Sbjct: 471 TMYSKCGNLEDSMVVFRRM-PDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDH 529

Query: 422 FTYSSILKACS 432
            T+ ++L ACS
Sbjct: 530 ITFINLLSACS 540



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 7/260 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+ CS    L +G++ H L+ K       +V ++LV+MYAKCG I        Q+  
Sbjct: 330 VGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYD 389

Query: 181 L-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           + D+     ++ G+ +N   ++A   + ++D   + P++ T +++L  C  L+A+D GKQ
Sbjct: 390 VDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQ 449

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHAQ +K ++    +V  AL TMY KCG +ED+  VF  +  R+VISW +II+ F QHG 
Sbjct: 450 LHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGR 509

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               L +   M+ +G  P+  TF   L++C     SHMG +       R M   D+    
Sbjct: 510 GSDALDMFEEMKLEGTAPDHITFINLLSAC-----SHMGLVDRGWFYFRAMT-KDYNLIP 563

Query: 360 IVDMYSGLGEIWEAKKQLKE 379
            +D Y+ + +I     QLKE
Sbjct: 564 TLDHYACMVDILSRAGQLKE 583



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 226/503 (44%), Gaps = 62/503 (12%)

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMY--IKCGMMEDAESVFEGL--VQRNVISWTAIIN 292
           G+ LH   +K    S   VSN+L+T Y  +   ++  A  VF  +    R+V SW +++N
Sbjct: 33  GEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLN 92

Query: 293 GFKQHGDYEKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
              +H           +M   + + P+ ++F  A  + A + ++  G + HA   K   +
Sbjct: 93  PLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSS 152

Query: 352 LGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
            G    FV TA+++MY  LG + +AK+    M    ++VSW A ++G+   + +EEA E 
Sbjct: 153 CGSNNVFVSTALLNMYCKLGAVSDAKRVFDGM-LHRNAVSWAAMVSGYATGKCSEEAFEL 211

Query: 409 FSQMVRNDAAC----DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           F  M++    C    +EF  +++L A S+   L    Q+H  ++K      V V +SL+ 
Sbjct: 212 FRLMLQK---CPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVT 268

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y K    + A RVF      + ++W++MI  Y+QNG A  A  +F +M   G  PT  T
Sbjct: 269 MYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFT 328

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL---------- 574
           F+ VL+ACS  G +  G++    MVK  G   +    S +VD+  + G +          
Sbjct: 329 FVGVLNACSDMGALVVGKQTHCLMVK-LGFETQVYVKSALVDMYAKCGCIGDAKDGFHQL 387

Query: 575 ----------------------EIALIFISNLP---IKPTAPIWRPLFAACRCHSDLKMA 609
                                 E AL+  S +    I P+      +  AC C + L + 
Sbjct: 388 YDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLG 447

Query: 610 EFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           + +  QIL+       +V   LS MY++ G   D+    + M  +++      SW    N
Sbjct: 448 KQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDV-----ISW----N 498

Query: 669 KIYRFFSQNKSHSEMPKVYEKLK 691
            I   FSQ+   S+   ++E++K
Sbjct: 499 SIISVFSQHGRGSDALDMFEEMK 521



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 13/202 (6%)

Query: 111 LESLLDKQFVI-------EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           L S +DKQ +I        VL  C+    L+LG++ HA I K        V  +L  MY+
Sbjct: 415 LYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYS 474

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTY 221
           KCG+++  + V ++MP  D+ S N +++ ++++     A   F  +KL+G    P+H T+
Sbjct: 475 KCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEG--TAPDHITF 532

Query: 222 STMLAICGSLSAIDEGK-QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL- 279
             +L+ C  +  +D G     A T     +        ++ +  + G +++A+   + + 
Sbjct: 533 INLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSIT 592

Query: 280 VQRNVISWTAIINGFKQHGDYE 301
           +      W  ++   +   D++
Sbjct: 593 IDHGTCLWRIVLGACRSLRDFD 614



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 23/257 (8%)

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE--IWEAKKQLKEMGKSAS 385
           + +S R    G   H   +K G A    V  +++  Y  L    +  A     ++  +  
Sbjct: 23  AASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALR 82

Query: 386 SV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL--LPSLATCEQ 442
            V SWN+ +    R+     A+  F  M+ +  A     +S      +   +PS +    
Sbjct: 83  DVASWNSLLNPLSRHHPVS-ALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAV 141

Query: 443 IHS---RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            H+   ++  S   +NV V ++L+  Y K G+  DA+RVF  +   + VSW +M+  Y+ 
Sbjct: 142 THALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYAT 201

Query: 500 NGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACS-----------HSGLVQDGQKVFES 547
              + +A  LF  M+ +     N     AVLSA S           H  +++DG   F S
Sbjct: 202 GKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVS 261

Query: 548 MVKEYGILPEEAHYSCM 564
           +  E  ++   A   CM
Sbjct: 262 V--ENSLVTMYAKAECM 276


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 210/622 (33%), Positives = 346/622 (55%), Gaps = 26/622 (4%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H L  K     D +V ASL+++Y++   + +   +  +MP  D+ S N +++GY +
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +    +A +    L  +D      T  ++L+ C      + G  +H+ ++K    S+  V
Sbjct: 229 SGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL---MRE 312
           SN L+ +Y + G + D + VF+ +  R++ISW +II  ++ +   E+PLR + L   MR 
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN---EQPLRAISLFQEMRL 341

Query: 313 DGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
             I P+  T  ++LAS  S L +           +++G  L D  +G A+V MY+ LG +
Sbjct: 342 SRIQPDCLTL-ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILK 429
             A+     +  +   +SWN  I+G+ +N    EAIE ++ M    + A ++ T+ S+L 
Sbjct: 401 DSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS   +L    ++H R++K+    +V V +SL + Y KCG  EDA  +F Q+   + V 
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I  +  +G   KA++LF++M+ EG++P + TF+ +LSACSHSGLV +GQ  FE M 
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            +YGI P   HY CMVD+ GRAG+LE AL FI ++ ++P A IW  L +ACR H ++ + 
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           +  S+ + E++P+    +V LSNMYA AG     +E R +   K + K PG S +EV NK
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
           +  F++ N++H    ++Y +L  L  +++ IG+            D+EKE  ++ HSERL
Sbjct: 700 VEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERL 759

Query: 719 AVGFGLISLPAKNKFECSRTLE 740
           A+ F LI+ PAK      + L 
Sbjct: 760 AIAFALIATPAKTTIRIFKNLR 781



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 264/539 (48%), Gaps = 23/539 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +  YC+    L+  +  HA +  +    +  ++A LVN+Y   G++         + 
Sbjct: 57  VHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113

Query: 180 YLDIASCNCLLAGYAK---NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
             D+ + N +++GY +   ++   + FS F+   G+   P++ T+ ++L  C     + +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL--TPDYRTFPSVLKAC---RTVID 168

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G ++H   +K  ++    V+ +L+ +Y +   + +A  +F+ +  R++ SW A+I+G+ Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G+ ++ L L   +R      +  T    L++C    + + G   H+  IK G+    FV
Sbjct: 229 SGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
              ++D+Y+  G + + +K    M      +SWN+ I  +  N++   AI  F +M  + 
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHS-RIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
              D  T  S+    S L  +  C  +    + K  F  ++ +G++++  Y K G  + A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSH 534
             VF+ L   DV+SWN++I  Y+QNG A +AI ++  M  EG I     T+++VL ACS 
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +G ++ G K+   ++K  G+  +    + + D+ G+ G+LE AL     +P   + P W 
Sbjct: 464 AGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WN 521

Query: 595 PLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            L A    H   + A  + K++L+  + PD    +VTL +  + +GL  + +   ++M+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT-FVTLLSACSHSGLVDEGQWCFEMMQ 579



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  CS+   L  G + H  + K  +  D FV  SL +MY KCG ++  +++  Q+P 
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++    N L+A +  +   ++A   F ++    V+P+H T+ T+L+ C     +DEG Q 
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QW 573

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             + M+  Y    ++ +   ++ MY + G +E A    + + +Q +   W A+++  + H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633

Query: 298 GDYE 301
           G+ +
Sbjct: 634 GNVD 637


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1028

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 195/579 (33%), Positives = 331/579 (57%), Gaps = 3/579 (0%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            +LS C+    LE+G ++H++I K  +  + FV  +LV+MYAKCG ++    + + M   D
Sbjct: 434  LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRD 493

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
              S N ++ GY ++    +AF  F++++   +  +    ++ L  C ++  + +GKQ+H 
Sbjct: 494  NVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHC 553

Query: 243  QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++K          ++L+ MY KCG++EDA  VF  + + +V+S  A+I G+ Q+ + E+
Sbjct: 554  LSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEE 612

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-GDFVGTAIV 361
             + L   M   G++P+E TF   + +C    +  +G  FH Q+IK G +  G+++G +++
Sbjct: 613  AVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLL 672

Query: 362  DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
             +Y     + EA     E+    S V W   ++G  +N   EEA++ + +M  + A  D+
Sbjct: 673  GLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQ 732

Query: 422  FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
             T+ ++L+ CS+L SL     IHS I     + +    ++LI+ Y KCG  + + +VF +
Sbjct: 733  ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDE 792

Query: 482  LTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   ++VVSWNS+I  Y++NG A  A+ +F+ M    I P   TFL VL+ACSH+G V D
Sbjct: 793  MRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSD 852

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            G+K+FE M+ +YGI     H +CMVDLLGR G L+ A  FI    +KP A +W  L  AC
Sbjct: 853  GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912

Query: 601  RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
            R H D    E  +++++EL+P +++ YV LSN+YA  G   +A   RK M+ + + K PG
Sbjct: 913  RIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPG 972

Query: 661  CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             SWI+V  + + F + ++SHS++ K+   L+ L   ++D
Sbjct: 973  YSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDLYDLMKD 1011



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 255/491 (51%), Gaps = 23/491 (4%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D     +++N Y   G +K    +  +MP  D+ + N +++G+ K      A  +FL + 
Sbjct: 260 DHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMR 319

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V+    T  ++L+  G ++ +D G  +HA+ +KL   S   V ++L++MY KC  ME
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VFE L +RN + W A+I G+  +G+  K + L   M+  G + +++TFT  L++CA
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              +  MG  FH+ +IK+ +    FVG A+VDMY+  G + +A++  + M     +VSWN
Sbjct: 440 VSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDR-DNVSWN 498

Query: 391 AQIAGFFRNQKTEEAIEAFSQM----VRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
             I G+ +++   EA + F +M    + +D AC     +S LKAC+ +  L   +Q+H  
Sbjct: 499 TIIGGYVQDENESEAFDLFMRMNSCGIVSDGAC----LASTLKACTNVHGLYQGKQVHCL 554

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            VK   +  +H GSSLI+ Y+KCG  EDA +VFS +    VVS N++I  YSQN    +A
Sbjct: 555 SVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQN-NLEEA 613

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           ++LF++M+ +G+ P+  TF  ++ AC     +  G + F   + ++G   E  +    + 
Sbjct: 614 VVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQ-FHGQIIKWGFSSEGEYLG--IS 670

Query: 567 LLG---RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD- 622
           LLG    + ++  A    S L    +  +W  + +    HS     E   K   E+  D 
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG---HSQNGFYEEALKFYKEMRHDG 727

Query: 623 ---DAAVYVTL 630
              D A +VT+
Sbjct: 728 ALPDQATFVTV 738



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 5/467 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG   HA   K  +  + +V +SLV+MY+KC  +++   V + +   +    N ++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRG 402

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N    +    F+ +       + +T++++L+ C     ++ G Q H+  +K +    
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKN 462

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY KCG +EDA  +FE +  R+ +SW  II G+ Q  +  +   L   M  
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNS 522

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            GI  +       L +C ++   + G   H   +K G+      G++++DMYS  G I +
Sbjct: 523 CGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIED 582

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+K    M    S VS NA IAG+ +N   EEA+  F +M+       E T+++I++AC 
Sbjct: 583 ARKVFSSM-PEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTKGVNPSEITFATIVEACH 640

Query: 433 LLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSW 490
              SL    Q H +I+K  F S   ++G SL+  Y       +A  +FS+L++   +V W
Sbjct: 641 KPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLW 700

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             M+  +SQNG   +A+  +++M  +G  P  +TF+ VL  CS    +++G+ +  S++ 
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAI-HSLIF 759

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
                 +E   + ++D+  + G ++ +      +  +     W  L 
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLI 806



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 219/463 (47%), Gaps = 37/463 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  +RE  +E GR+ H  + K  +  + +   +LV+MYAKC  +     V   +   +
Sbjct: 166 VLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPN 225

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
                CL +GY K  L ++A   F ++ G   +P+H  + T                   
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVT------------------- 266

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                           ++  YI  G ++DA  +F  +   +V++W  +I+G  + G    
Sbjct: 267 ----------------VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIV 310

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +     MR+  +     T    L++   + N  +G + HA+ IK G+A   +VG+++V 
Sbjct: 311 AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS   E  EA  ++ E  +  + V WNA I G+  N ++ + +E F  M  +    D+F
Sbjct: 371 MYSKC-EKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++S+L  C++   L    Q HS I+K K   N+ VG++L++ Y KCG+ EDA ++F  +
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN++I  Y Q+    +A  LF +M   GI    +   + L AC++   +  G+
Sbjct: 490 CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGK 549

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +V    VK  G+       S ++D+  + G +E A    S++P
Sbjct: 550 QVHCLSVK-CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 207/447 (46%), Gaps = 42/447 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLL 190
           L +G+  H+      +  +  +  ++V++YAKC  +       KQ   L  D+ + N +L
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVS---YAEKQFNSLEKDVTAWNSML 132

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           + Y+      +    F+ L    + PN +T+S +L+     + ++ G+Q+H   +K+   
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
             +    AL+ MY KC  + DA+ VF+G+V  N + WT + +G+ + G  E+ + +   M
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           R +G  P+   F                                     +++ Y  LG++
Sbjct: 253 RGEGHRPDHLAFVT-----------------------------------VINTYISLGKL 277

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            +A+    EM  S   V+WN  I+G  +      AIE F  M ++       T  S+L A
Sbjct: 278 KDARLLFGEM-PSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
             ++ +L     +H+  +K    SN++VGSSL+  Y+KC   E A +VF  L   + V W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLW 396

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N+MI+ Y+ NG + K + LF  M   G    + TF ++LS C+ S  ++ G + F S++ 
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIII 455

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +  +       + +VD+  + G LE A
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDA 482



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 136/299 (45%), Gaps = 37/299 (12%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+  GK +H++++ L   S+  + NA++ +Y KC  +  AE  F  L +++V +W ++++
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +   G   K LR    + E+ I PN++TF++ L++ A   N   G   H  +IK G+  
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             + G A+VDMY+    + +A++    +    ++V W    +G+ +    EEA+  F +M
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGI-VDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  D   + ++                                   I  Y   G  
Sbjct: 253 RGEGHRPDHLAFVTV-----------------------------------INTYISLGKL 277

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           +DA  +F ++ + DVV+WN MI  + + G    AI  F  M    ++ T ST  +VLSA
Sbjct: 278 KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 176/372 (47%), Gaps = 22/372 (5%)

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H++ +  G+     +G AIVD+Y+   ++  A+KQ   + K  ++  WN+ ++ +
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKDVTA--WNSMLSMY 135

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
               +  + + +F  +  N    ++FT+S +L   +   ++    QIH  ++K   E N 
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNS 195

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           + G +L++ Y KC    DA+RVF  +   + V W  +   Y + G   +A+I+FE+M  E
Sbjct: 196 YCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGE 255

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G RP +  F+ V++     G ++D + +F  M       P+   ++ M+   G+ G   +
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCEIV 310

Query: 577 ALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSN 632
           A+ +  N+    +K T      + +A    ++L +   +  + ++L    +  V  +L +
Sbjct: 311 AIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 633 MYAEA-GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           MY++   ++A A+    L +  ++          ++N + R ++ N    ++ +++  +K
Sbjct: 371 MYSKCEKMEAAAKVFEALEERNDV----------LWNAMIRGYAHNGESHKVMELFMDMK 420

Query: 692 QLMQQIEDIGHT 703
                I+D   T
Sbjct: 421 SSGYNIDDFTFT 432


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 189/600 (31%), Positives = 318/600 (53%), Gaps = 18/600 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C +   L  GR  H  + +T       +   L+ MY  CG    +  V  +M   ++ S 
Sbjct: 97  CGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSW 156

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++ YAKN   ++A   F  +    ++PN   Y ++L  C   S ++ GKQ+H+  ++
Sbjct: 157 VIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIR 216

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            Q  +   V  A+  MY++CG +E A+ VF+G+  +N ++WT ++ G+ Q    E  L L
Sbjct: 217 AQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALEL 276

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G++ +E+ F++ L  C  L +  MG   H+ ++K G      VGT +VD Y  
Sbjct: 277 FARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVK 336

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G+I  A +    + +  + VSW+A I+GF ++ + E+ I+ F+ +       + F Y+S
Sbjct: 337 CGDIESAYRSFGRISE-PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTS 395

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           + +AC+   +L    Q H   +K    S ++  S+++  Y+KCG  + A R F  +   D
Sbjct: 396 VFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPD 455

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+W ++I  Y+ +G A +A+  F +M   G+RP   TF+AVL+ACSHSGLV + ++   
Sbjct: 456 AVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLG 515

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM ++YG+ P   HY CM+D   RAG L  AL  I+ +P +P A  W+ L   C  H DL
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDL 575

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           K+ +  ++ +  LDP D A Y+ L N+Y+  G   +A   RKLM  +E+ KE  CSWI V
Sbjct: 576 KLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISV 635

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLIS 726
             +++R                   +L+ + +D+  +   +++++L HSE+LA+ FGLIS
Sbjct: 636 KGQVHRPV-----------------RLLNEEDDVSCSLPARKEQLLDHSEKLAIAFGLIS 678



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 226/461 (49%), Gaps = 6/461 (1%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N  L   +K     +A  F  ++D  DV    ++Y  +   CG L ++ +G+ +H +  +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                  ++ N LL MY  CG   D + VF+ ++ +N++SW  +I+ + ++G+ EK +RL
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M+  GI PN   +   L SC       +G   H+ VI+  +     V TAI +MY  
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR 235

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  AK     M  + ++V+W   + G+ + +K E A+E F++M       DEF +S 
Sbjct: 236 CGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +LK C  L      +QIHS IVK   ES V VG+ L++ Y KCG  E A R F +++  +
Sbjct: 295 VLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSW+++I  +SQ+GR    I +F  +  EG+   +  + +V  AC+    +  G +   
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
             +K  G++      S MV +  + G+L+ A     ++  +P A  W  + +    H + 
Sbjct: 415 DAIKR-GLVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGNA 472

Query: 607 --KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
              +  F   Q   + P +A  ++ +    + +GL A+A++
Sbjct: 473 AEALGFFRRMQSYGVRP-NAVTFIAVLTACSHSGLVAEAKQ 512



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 188/376 (50%), Gaps = 3/376 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L  C     LELG++ H+ + +  +  +  V  ++ NMY +CG ++    V   M  
Sbjct: 192 MSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            +  +   L+ GY +    + A   F ++    V+ + + +S +L +C  L   D GKQ+
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQI 311

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  +KL   S+ +V   L+  Y+KCG +E A   F  + + N +SW+A+I+GF Q G  
Sbjct: 312 HSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  +++   +R +G+  N + +T    +CA+  N +MG   H   IKRG+    +  +A+
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V MYS  G +  A++  + + +   +V+W A I+G+  +    EA+  F +M       +
Sbjct: 432 VTMYSKCGRLDYARRAFESIDE-PDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPN 490

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVF 479
             T+ ++L ACS    +A  +Q    + +    +  +     +I+ Y++ G   +A  + 
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELI 550

Query: 480 SQLT-AADVVSWNSMI 494
           +++    D +SW S++
Sbjct: 551 NRMPFEPDAMSWKSLL 566



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 110 SLESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           ++E +   +FV   VL  C   E  ++G++ H+ I K     +  V   LV+ Y KCGDI
Sbjct: 281 AMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDI 340

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           +S      ++   +  S + L++G++++   +     F  L    V  N + Y+++   C
Sbjct: 341 ESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQAC 400

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            + + ++ G Q H   +K   +S     +A++TMY KCG ++ A   FE + + + ++WT
Sbjct: 401 AAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWT 460

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           AII+G+  HG+  + L     M+  G+ PN  TF   L +C     SH G +  A+    
Sbjct: 461 AIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC-----SHSGLVAEAKQYLG 515

Query: 349 GMALGDFVGTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            M+    V   I      +D YS  G + EA + +  M     ++SW + + G
Sbjct: 516 SMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 85/189 (44%), Gaps = 4/189 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +L+      V   C+ +  L +G + H    K  +    +  +++V MY+KCG +     
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             + +   D  +   +++GYA +    +A  FF ++    V+PN  T+  +L  C     
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506

Query: 234 IDEGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAI 290
           + E KQ +  +M   Y  K  +   + ++  Y + G++ +A  +   +  + + +SW ++
Sbjct: 507 VAEAKQ-YLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSL 565

Query: 291 INGFKQHGD 299
           + G   H D
Sbjct: 566 LGGCWAHCD 574


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 215/711 (30%), Positives = 380/711 (53%), Gaps = 40/711 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID-DGCSNTVPV 106
           A QLF K P +  +ST +++ +GY+     G +R  +        DG ++    + T+ +
Sbjct: 71  ARQLFEKMPHKNTVST-NMMISGYVKSGNLGEARKLF--------DGMVERTAVTWTILI 121

Query: 107 TCYSLESLLDKQF-----------------VIEVLSYCSREECLELGRRYHALITKTAVC 149
             YS  +   + F                  + +LS C+  E      +    I K    
Sbjct: 122 GGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYD 181

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
               V  +LV+ Y K   +     + K+MP +D  S N ++ GY+K+ L ++A + F+++
Sbjct: 182 SRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEM 241

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               ++P  +T++ +L     L  I  G+Q+H+  +K  ++    VSNALL  Y K   +
Sbjct: 242 QNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSV 301

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            DA  +F+ + +++ +S+  II+G+   G ++    L   ++    D  ++ F   L+  
Sbjct: 302 IDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIA 361

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           ++  +  MG   HAQ I         VG ++VDMY+  G+  EA+     +    S+V W
Sbjct: 362 SNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR-SAVPW 420

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
            A I+ + +    EE ++ F++M +     D+ T++S+L+A + + SL+  +Q+HS I+K
Sbjct: 421 TAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIK 480

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S F SNV  GS+L++ Y KCGS +DA + F ++   ++VSWN+MI AY+QNG A   +  
Sbjct: 481 SGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKS 540

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F++MV+ G++P + +FL VLSACSHSGLV++G   F SM + Y + P   HY+ +VD+L 
Sbjct: 541 FKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLC 600

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAAVYV 628
           R+G+   A   ++ +PI P   +W  +  ACR H + ++A   + Q+  ++   DAA YV
Sbjct: 601 RSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYV 660

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            +SN+YA AG   +  +  K M+ + + K P  SW+E+ ++ + F + ++ H ++ ++ +
Sbjct: 661 NMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRK 720

Query: 689 KLKQLMQQIEDIG---------HTDNE--KEDRVLYHSERLAVGFGLISLP 728
           K+  L + +E++G         H ++E  K + + YHSERLA+ F LIS P
Sbjct: 721 KIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTP 771



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 243/524 (46%), Gaps = 36/524 (6%)

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA--- 197
           A I KT    D   +   V  + K G++     + ++MP+ +  S N +++GY K+    
Sbjct: 41  ARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG 100

Query: 198 ----LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               LFD                        +AF  F+++     +P++ T+ T+L+ C 
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN 160

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
                ++  Q+  Q +KL Y S+  V N L+  Y K   ++ A  +F+ + + + +S+ A
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+ + G  EK + L   M+  G+ P E+TF   L +   L +  +G   H+ VIK  
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FV  A++D YS    + +A+K   EM +    VS+N  I+G+  + K + A + F
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQ-DGVSYNVIISGYAWDGKHKYAFDLF 339

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            ++        +F ++++L   S         QIH++ + +  +S + VG+SL++ Y KC
Sbjct: 340 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 399

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G +E+AE +F+ LT    V W +MI AY Q G   + + LF KM    +    +TF ++L
Sbjct: 400 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLL 459

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            A +    +  G+++   ++K  G +      S ++D+  + G ++ A+     +P +  
Sbjct: 460 RASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 518

Query: 590 APIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
              W  + +A      ++  +  F    +  L PD  +    LS
Sbjct: 519 VS-WNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 177/391 (45%), Gaps = 34/391 (8%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS------------- 286
           + A+ +K  +   T+ SN  +  ++K G +  A  +FE +  +N +S             
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 287 ------------------WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
                             WT +I G+ Q   +++   L   M+  G +P+  TF   L+ 
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C      +       Q+IK G      VG  +VD Y     +  A +  KEM +   SVS
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE-IDSVS 217

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           +NA I G+ ++   E+A+  F +M  +     EFT++++L A   L  +   +QIHS ++
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K+ F  NV V ++L++ Y+K  S  DA ++F ++   D VS+N +I  Y+ +G+ + A  
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFD 337

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF ++           F  +LS  S++   + G+++    +       E    + +VD+ 
Sbjct: 338 LFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTAD-SEILVGNSLVDMY 396

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            + GK E A +  +NL  +   P W  + +A
Sbjct: 397 AKCGKFEEAEMIFTNLTHRSAVP-WTAMISA 426


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 207/634 (32%), Positives = 345/634 (54%), Gaps = 28/634 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  V  +++ C++ + LE GRR H  +  T    D  +  +L+ MYAKCG +     V 
Sbjct: 29  DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 88

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + M   D+ + + ++A YA+    + A   + ++    V+PN  T++  L  C S++ + 
Sbjct: 89  EGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 148

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+ +H + +  +      + ++LL MY+KC  M +A  VFEG+  RNV S+TA+I+ + 
Sbjct: 149 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 208

Query: 296 QHGDYEKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q G++ + L L   M + + I+PN YTF   L +   L N   G   H  +  RG     
Sbjct: 209 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 268

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  A+V MY   G   EA+K    M  + + +SW + IA + ++   +EA+  F +M  
Sbjct: 269 VVQNALVTMYGKCGSPVEARKVFDSM-TARNVISWTSMIAAYAQHGNPQEALNLFKRM-- 325

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
            D      ++SS L AC+LL +L    +IH R+V++   S   + +SL+  Y +CGS +D
Sbjct: 326 -DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASP-QMETSLLSMYARCGSLDD 383

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A RVF+++   D  S N+MI A++Q+GR ++A+ ++ KM  EGI     TF++VL ACSH
Sbjct: 384 ARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSH 443

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           + LV D +   +S+V ++G++P   HY CMVD+LGR+G+L  A   +  +P +  A  W 
Sbjct: 444 TSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWM 503

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L + C+ H DL   E  ++++ EL P +   YV LSNMYA A    DA   RK M+ + 
Sbjct: 504 TLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERG 563

Query: 655 ISKEPGCSWIEVYNKIYRFFS-----QNKSHS--EMPKVYEKLKQLMQQIEDIGH----- 702
           +++    S+IE+ N+++ F S     Q + H    M +V   L +L++ ++  G+     
Sbjct: 564 VTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTR 623

Query: 703 ----------TDNEKEDRVLYHSERLAVGFGLIS 726
                     ++ EK+  + +HSERLA+ +GLI+
Sbjct: 624 EVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIA 657



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 241/444 (54%), Gaps = 9/444 (2%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           QA   + +++   +  + +  ++++A C  L A++EG++LH   +   + +   +  ALL
Sbjct: 13  QALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALL 72

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            MY KCG ++DA+ VFEG+  +++ +W++II  + + G  E  + L   M  +G++PN  
Sbjct: 73  QMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVV 132

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF  AL  CAS+     G   H +++   +   D +  ++++MY    E+ EA+K  + M
Sbjct: 133 TFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGM 192

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLAT 439
            K+ +  S+ A I+ + +  +  EA+E FS+M + +A   + +T+++IL A   L +L  
Sbjct: 193 -KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEK 251

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             ++H  +    F++NV V ++L+  Y KCGS  +A +VF  +TA +V+SW SMI AY+Q
Sbjct: 252 GRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ 311

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G  ++A+ LF++M VE   P+  +F + L+AC+  G + +G+++   +V+     P+  
Sbjct: 312 HGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQ-- 366

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI-LE 618
             + ++ +  R G L+ A    + +  +  A     + AA   H   K A  I +++  E
Sbjct: 367 METSLLSMYARCGSLDDARRVFNRMKTR-DAFSCNAMIAAFTQHGRKKQALRIYRKMEQE 425

Query: 619 LDPDDAAVYVTLSNMYAEAGLQAD 642
             P D   +V++    +   L AD
Sbjct: 426 GIPADGITFVSVLVACSHTSLVAD 449



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 96/169 (56%), Gaps = 4/169 (2%)

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IA   R  +  +A+E + +M       D+F  +S++ AC+ L +L    ++H  ++ + F
Sbjct: 2   IAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGF 61

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
            +++ + ++L++ Y KCGS +DA+RVF  +   D+ +W+S+I AY++ GR   A++L+ +
Sbjct: 62  RTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRR 121

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDG----QKVFESMVKEYGILPE 557
           M+ EG+ P   TF   L  C+    + DG    Q++  S V +  +L +
Sbjct: 122 MIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQD 170


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 206/624 (33%), Positives = 344/624 (55%), Gaps = 16/624 (2%)

Query: 132 CLEL--GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           C+ L  G++ H  + K     D FV ASLV++Y++ G +     V   MP  D+ S N +
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G+ +N     A     ++ G  V+ +  T +++L +C     +  G  +H   +K   
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL 253

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            S   VSNAL+ MY K G ++DA+ VF+ +  R+++SW +II  ++Q+ D    LR    
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLG 368
           M+  GI P+  T     +  + L +  +       VI+R     D V G A+V+MY+ LG
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSI 427
            +  A     ++ +   ++SWN  + G+ +N    EAI+A++ M    D   ++ T+ SI
Sbjct: 374 YMNCAHTVFDQLPRK-DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + A S + +L    +IH++++K+    +V V + LI+ Y KCG  EDA  +F ++     
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           V WN++I +   +GR  +A+ LF+ M+ E ++  + TF+++LSACSHSGLV +GQK F+ 
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           M KEYGI P   HY CMVDLLGRAG LE A   + N+PI+P A IW  L +AC+ + + +
Sbjct: 553 MQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           +    S ++LE+D ++   YV LSN+YA         + R L + + + K PG S + V 
Sbjct: 613 LGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSE 716
           +K   F++ N++H +  ++Y++LK L  +++ +G+            ++EKE  +  HSE
Sbjct: 673 SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732

Query: 717 RLAVGFGLISLPAKNKFECSRTLE 740
           RLA+ FG+IS P ++     + L 
Sbjct: 733 RLAIAFGIISTPPRSPIRIFKNLR 756



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 260/532 (48%), Gaps = 18/532 (3%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HAL+       +  ++  L+N+Y   GDI    +    +   +I S N +++ Y + 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 197 ALFDQAFS----FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             + +A +     F    G  ++P+ YT+  +L  C SL    +GK++H    K+ +   
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDD 155

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+ +L+ +Y + G+++ A  VF  +  ++V SW A+I+GF Q+G+    L ++  M+ 
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+  +  T    L  CA   +   G + H  V+K G+    FV  A+++MYS  G + +
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +M +    VSWN+ IA + +N     A+  F  M       D  T  S+    S
Sbjct: 276 AQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 433 LLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            L        I   +++ ++ + +V +G++L+  Y K G    A  VF QL   D +SWN
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIR---PTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +++  Y+QNG A +AI  +  M  E  R   P   T+++++ A SH G +Q G K+   +
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMM--EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           +K   +  +    +C++DL G+ G+LE A+     +P   + P W  + A+   H   + 
Sbjct: 453 IKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEE 510

Query: 609 AEFISKQIL-ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           A  + K +L E    D   +V+L +  + +GL  + ++   +M+ KE   +P
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ-KEYGIKP 561



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 9/375 (2%)

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
           A+  S   ++  K+LHA  +         +S  L+ +Y+  G +  + S F+ + ++N+ 
Sbjct: 27  ALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIF 86

Query: 286 SWTAIINGFKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           SW +II+ + + G Y + +    +L  +     + P+ YTF   L +C SL +   G   
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKV 143

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H  V K G     FV  ++V +YS  G +  A K   +M       SWNA I+GF +N  
Sbjct: 144 HCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG-SWNAMISGFCQNGN 202

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
              A+   ++M       D  T +SIL  C+    +     IH  ++K   +S+V V ++
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNA 262

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y+K G  +DA+ VF Q+   D+VSWNS+I AY QN     A+  F+ M + GIRP 
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T +++ S  S     +  + +   +++   +  +    + +V++  + G +  A    
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 582 SNLPIKPTAPIWRPL 596
             LP K T   W  L
Sbjct: 383 DQLPRKDTIS-WNTL 396



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 194/407 (47%), Gaps = 11/407 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  +L  C++ + +  G   H  + K  +  D FV+ +L+NMY+K G ++    V
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             QM   D+ S N ++A Y +N     A  FF  +    ++P+  T  ++ +I   LS  
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339

Query: 235 DEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              + +    ++ ++L K  V  NAL+ MY K G M  A +VF+ L +++ ISW  ++ G
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399

Query: 294 FKQHGDYEKPLRLVCLMRE--DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + Q+G   + +    +M E  D I PN+ T+   + + + +     G   HA++IK  + 
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  FV T ++D+Y   G + +A     E+ +  +SV WNA IA    + + EEA++ F  
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 412 MVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           M+      D  T+ S+L ACS   L+     C  I  +    K  S  H G  +++   +
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIK-PSLKHYG-CMVDLLGR 575

Query: 469 CGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            G  E A E V +     D   W +++ A    G A    +  ++++
Sbjct: 576 AGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 120/257 (46%), Gaps = 25/257 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A  +F++ P++  +S + L+  GY    + G++       N       + + C +T+P  
Sbjct: 378 AHTVFDQLPRKDTISWNTLV-TGY---TQNGLASEAIDAYN-------MMEECRDTIP-- 424

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   ++   + ++   S    L+ G + HA + K ++  D FV   L+++Y KCG 
Sbjct: 425 --------NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++  +++  ++P       N ++A    +   ++A   F  +    V+ +H T+ ++L+ 
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNV 284
           C     +DEG++     M+ +Y  K ++ +   ++ +  + G +E A  +   + +Q + 
Sbjct: 537 CSHSGLVDEGQKCF-DIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 285 ISWTAIINGFKQHGDYE 301
             W A+++  K +G+ E
Sbjct: 596 SIWGALLSACKIYGNAE 612


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 208/631 (32%), Positives = 329/631 (52%), Gaps = 45/631 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF-SFFLKLDG 211
           F   +L+  Y+K G I  M +  +++P  D  + N L+ GY+ + L   A  ++   +  
Sbjct: 73  FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY-------- 263
                   T  TML +  S   +  GKQ+H Q +KL + S   V + LL MY        
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192

Query: 264 -----------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                                  + CGM+EDA  +F G+ +++ +SW A+I G  Q+G  
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLA 251

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ +     M+  G+  ++Y F   L +C  L   + G   HA +I+       +VG+A+
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY     +  AK     M K  + VSW A + G+ +  + EEA++ F  M R+    D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            +T    + AC+ + SL    Q H + + S     V V +SL+  Y KCG  +D+ R+F+
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D VSW +M+ AY+Q GRA + I LF+KMV  G++P   T   V+SACS +GLV+ 
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           GQ+ F+ M  EYGI+P   HYSCM+DL  R+G+LE A+ FI+ +P  P A  W  L +AC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R   +L++ ++ ++ ++ELDP   A Y  LS++YA  G      + R+ M+ K + KEPG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG--------HTDNEKEDRVL 712
            SWI+   K++ F + ++S   + ++Y KL++L  +I D G        H D E+  +V 
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670

Query: 713 ---YHSERLAVGFGLISLPAKNKFECSRTLE 740
              YHSERLA+ FGLI +P+       + L 
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLR 701



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 144/284 (50%), Gaps = 7/284 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     VL  C     +  G++ HA I +T      +V ++L++MY KC  +     V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M   ++ S   ++ GY +    ++A   FL +    + P+HYT    ++ C ++S++
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           +EG Q H + +    +    VSN+L+T+Y KCG ++D+  +F  +  R+ +SWTA+++ +
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM-- 350
            Q G   + ++L   M + G+ P+  T T  +++C  A L      Y F     + G+  
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY-FKLMTSEYGIVP 506

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           ++G +  + ++D++S  G + EA + +  M     ++ W   ++
Sbjct: 507 SIGHY--SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 4/183 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           + +S C+    LE G ++H     + +     V+ SLV +Y KCGDI     +  +M   
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D  S   +++ YA+     +    F K+    ++P+  T + +++ C     +++G Q +
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRY 494

Query: 242 AQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
            + M  +Y    ++ +   ++ ++ + G +E+A     G+    + I WT +++  +  G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554

Query: 299 DYE 301
           + E
Sbjct: 555 NLE 557



 Score = 46.6 bits (109), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 18/223 (8%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + IH  I+++       + ++++ AY    S   A RVF ++   ++ SWN+++ AYS+ 
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 501 GRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           G   +    FEK+   +G+     T+  ++   S SGLV    K + +M++++       
Sbjct: 86  GLISEMESTFEKLPDRDGV-----TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140

Query: 560 HYSCMVDLLGRAGKLEIALIF---ISNLPIKPTAPIWRPL---FAACRCHSDLKMAEFIS 613
               M+ L    G + +       +  L  +    +  PL   +A   C SD K      
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK------ 194

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
           K    LD  +  +Y +L       G+  DA +  + M+   +S
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 197/613 (32%), Positives = 339/613 (55%), Gaps = 16/613 (2%)

Query: 142 LITKTAVCGDQ---FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           +  K  V G Q   F+ A LVN  +  G++     +  + P  D+   N ++  Y+++  
Sbjct: 94  IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGF 153

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           F  A   + ++    V P+ +++  +L  C +L A++ G+++H Q  +  + S   V N 
Sbjct: 154 FGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNG 213

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ +Y KCG +  A +VF  LV R ++SWT+II+G+ Q+G   + LR+   MR+  + P+
Sbjct: 214 LVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPD 273

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
                  L +   + +   G   H  VIK G+     +  ++  +Y+  G +  A+    
Sbjct: 274 WIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFN 333

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           ++ ++ S + WNA I+G+ +N   EEAIE F  M   +   D  T +S + AC+ + SL 
Sbjct: 334 QV-ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +   I  S+F ++V V +SLI+ Y KCGS + A  VF ++   DVV W++M+  Y 
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG 452

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G+ R++IILF  M   G+ P + TF+ +L+AC +SGLV++G  +F  M ++YGI P  
Sbjct: 453 LHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRH 511

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+C+VDLLGRAG L+ A  F+ N+PI+P   +W  L +AC+ H  + + E+ ++++  
Sbjct: 512 QHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFS 571

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           LDP +   YV LSN+YA + L     + R LM+ K ++K  G S IE+  K+  F + +K
Sbjct: 572 LDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDK 631

Query: 679 SHSEMPKVYEKLKQLMQQIEDIG---HTDN--------EKEDRVLYHSERLAVGFGLISL 727
           +H    +++E+++ L +++++ G   HT++        E E+ +  HSERLA+ +GLIS 
Sbjct: 632 THPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLIST 691

Query: 728 PAKNKFECSRTLE 740
           P       ++ L 
Sbjct: 692 PPGTTLRITKNLR 704



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 156/314 (49%), Gaps = 11/314 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    LE+GRR H  I +     D FV   LV +YAKCG+I    AV  ++    
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT 238

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S   +++GYA+N    +A   F ++   +V+P+     ++L     +  ++ GK +H 
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+    +  +  +L ++Y KCG +  A   F  +   ++I W A+I+G+ ++G  E+
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-----VG 357
            + L  LM+   I P+  T T ++A+CA +     G +  A+ +   +++ +F     V 
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQI-----GSLELARWMDEYISMSEFRNDVIVN 413

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           T+++D Y+  G +  A+     +      V W+A + G+  + +  E+I  F  M +   
Sbjct: 414 TSLIDTYAKCGSVDMARFVFDRI-PDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV 472

Query: 418 ACDEFTYSSILKAC 431
           + ++ T+  +L AC
Sbjct: 473 SPNDVTFVGLLTAC 486



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 147/304 (48%), Gaps = 8/304 (2%)

Query: 300 YEKPLRLVCLMREDGIDPNEYTFT----VALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Y   L L      +  D NE TF      A     S+  +H+  ++ A+++  G+  G F
Sbjct: 50  YSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDDSIHKTHLNQIY-AKLLVTGLQYGGF 108

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +   +V+  S +GE+  A+K   +         WNA +  + R+     AIE +++M   
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKF-PDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             + D F++  +LKACS LP+L    ++H +I +  FES+V V + L+  Y KCG    A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF +L    +VSW S+I  Y+QNG+  +A+ +F +M    +RP     ++VL A +  
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             ++ G+ +   ++K  G+  E      +  L  + G + +A +F + +   P+   W  
Sbjct: 288 EDLEHGKSIHGCVIK-MGLECEFDLLISLTSLYAKCGHVMVARLFFNQVE-NPSLIFWNA 345

Query: 596 LFAA 599
           + + 
Sbjct: 346 MISG 349



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 127/276 (46%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL   +  E LE G+  H  + K  +  +  +  SL ++YAKCG +        Q+ 
Sbjct: 277 LVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVE 336

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              +   N +++GY KN   ++A   F  +   +++P+  T ++ +A C  + +++  + 
Sbjct: 337 NPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARW 396

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +       ++ +   V+ +L+  Y KCG ++ A  VF+ +  ++V+ W+A++ G+  HG 
Sbjct: 397 MDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQ 456

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + L   MR+ G+ PN+ TF   L +C +      G+    ++   G+         
Sbjct: 457 GRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYAC 516

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +VD+    G +  A   +  M        W A ++ 
Sbjct: 517 VVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 1/183 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V   ++ C++   LEL R     I+ +    D  V  SL++ YAKCG +     V 
Sbjct: 374 DSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVF 433

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++P  D+   + ++ GY  +    ++   F  +    V PN  T+  +L  C +   ++
Sbjct: 434 DRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVE 493

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIINGF 294
           EG  L  +        +      ++ +  + G ++ A + V    ++  V  W A+++  
Sbjct: 494 EGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSAC 553

Query: 295 KQH 297
           K H
Sbjct: 554 KIH 556


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 331/616 (53%), Gaps = 13/616 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA I  + +  + F++ SL+N Y  CG +     +    P  ++ S   L++G AKN
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F +A   F ++   + +PN  T S++L    +L  I   K +H   ++  +     V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVE 160

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            AL+ MY K G M  A  +FE + +RNV+SW AI++G+  HG  E+ + L  LMR  G+ 
Sbjct: 161 TALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLL 220

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            + YT    + +  S+    +G   H  +I+ G      + TA++D+Y     + +A + 
Sbjct: 221 VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRV 280

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLP 435
             EM       +W   + GF   +  + AI+ F++M+   +   D      IL +CS   
Sbjct: 281 FSEM-FVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSG 339

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L    ++H+  +K+ F +N+ VGS++I+ Y  CG+ EDA+R F  +   DVV WN+MI 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
               NG    AI LF +M   G+ P  STF++VL ACSH+G+V +G ++F  MVK    +
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDI 459

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+C++D+LGRAG+L+ A  FI+N+P +P   ++  L  ACR H ++K+   IS++
Sbjct: 460 PNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQK 519

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           I E++P+DA  YV LSNMYA AG     +  R  ++ K + K+PG S IE+  +IY F +
Sbjct: 520 IFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFMA 579

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGL 724
             K H +  K+   LK L+ +I+  G+           +D+ K+D + +HSE++A+ FGL
Sbjct: 580 GEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGL 639

Query: 725 ISLPAKNKFECSRTLE 740
           +          ++ L 
Sbjct: 640 MRTKPGTIIRITKNLR 655



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 3/345 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           + + +  H    +    G+ FV  +LV+MY+K G +     + + M   ++ S N +++G
Sbjct: 138 IRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSG 197

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y+ +   ++A   F  +    +  + YT  +++    S+  +  G  +H   ++  Y + 
Sbjct: 198 YSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND 257

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR-LVCLMR 311
             +  AL+ +Y+    ++DA  VF  +  ++V +WT ++ GF     +++ ++    ++ 
Sbjct: 258 KHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLG 317

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
              +  +       L+SC+       G   HA  IK   A   FVG+A++DMY+  G + 
Sbjct: 318 IQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLE 377

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +AK+    MG+    V WNA IAG   N    +AI+ F QM  +    DE T+ S+L AC
Sbjct: 378 DAKRFFYGMGEK-DVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436

Query: 432 SLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDA 475
           S    +    QI   +VK+  +  N+   + +I+   + G  + A
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAA 481



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 117/229 (51%), Gaps = 6/229 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L+D   ++ ++       CL++G   H  I +T    D+ +  +L+++Y     +     
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHR 279

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLS 232
           V  +M   D+A+   +L G++    +D+A   F K+ GI +++ +      +L+ C    
Sbjct: 280 VFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSG 339

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+ +G+++HA  +K  + +   V +A++ MY  CG +EDA+  F G+ +++V+ W A+I 
Sbjct: 340 ALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIA 399

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           G   +G     + L   M+  G+DP+E TF   L +C     SH G ++
Sbjct: 400 GNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC-----SHAGMVY 443



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 104/220 (47%), Gaps = 4/220 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ +LS CS    L+ GRR HAL  KT    + FV +++++MYA CG+++     
Sbjct: 323 LDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   D+   N ++AG   N     A   FL++ G  + P+  T+ ++L  C     +
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442

Query: 235 DEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
            EG Q+    +K  + +        ++ +  + G ++ A S    +  Q +   ++ ++ 
Sbjct: 443 YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             + HG+ +    +   + E  ++PN+  + V L++  +L
Sbjct: 503 ACRIHGNIKLGHEISQKIFE--MEPNDAGYYVLLSNMYAL 540



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 10/158 (6%)

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +++SIL+    L  L   +QIH++I+ S    N  + +SL+ AY  CG   DA+++F   
Sbjct: 26  SHASILRK---LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +VVSW  +I   ++N    +AI +F +M +   +P   T  +VL A ++ GL++  +
Sbjct: 83  PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142

Query: 543 KVFESMVK---EYGILPEEAHYSCMVDLLGRAGKLEIA 577
            V    V+   E  +  E A    +VD+  + G + +A
Sbjct: 143 SVHCFWVRGGFEGNVFVETA----LVDMYSKFGCMGVA 176


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 206/634 (32%), Positives = 345/634 (54%), Gaps = 28/634 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  V  +++ C++ + LE GRR H  +  T    D  +  +L+ MYAKCG +     V 
Sbjct: 9   DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + M   D+ + + +++ YA+    + A   + ++    V+PN  T++  L  C S++ + 
Sbjct: 69  EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 128

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+ +H + +  +      + ++LL MY+KC  M +A  VFEG+  RNV S+TA+I+ + 
Sbjct: 129 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 188

Query: 296 QHGDYEKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q G++ + L L   M + + I+PN YTF   L +   L N   G   H  +  RG     
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  A+V MY   G   EA+K    M  + + +SW + IA + ++   +EA+  F +M  
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSM-TARNVISWTSMIAAYAQHGNPQEALNLFKRM-- 305

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
            D      ++SS L AC+LL +L    +IH R+V++   S   + +SL+  Y +CGS +D
Sbjct: 306 -DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSMYARCGSLDD 363

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A RVF+++   D  S N+MI A++Q+GR ++A+ ++ +M  EGI     TF++VL ACSH
Sbjct: 364 ARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSH 423

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           + LV D +  F+S+V ++G++P   HY CMVD+LGR+G+L  A   +  +P +  A  W 
Sbjct: 424 TSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWM 483

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L + C+ H DL   E  ++++ EL P +   YV LSNMYA A    DA   RK M+ + 
Sbjct: 484 TLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERG 543

Query: 655 ISKEPGCSWIEVYNKIYRFFS-----QNKSHS--EMPKVYEKLKQLMQQIEDIGH----- 702
           ++     S+IE+ N+++ F S     Q + H    M +V   L +L++ ++  G+     
Sbjct: 544 VTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYVPDTR 603

Query: 703 ----------TDNEKEDRVLYHSERLAVGFGLIS 726
                     ++ EK+  + +HSERLA+ +GLI+
Sbjct: 604 EVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIA 637



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 41/414 (9%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M E GI  +++  T  +A+C  L+    G   H  +I  G      + TA++ MY+  G 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +AK+  + M +     +W++ I+ + R  + E A+  + +M+      +  T++  L 
Sbjct: 61  LDDAKRVFEGM-EIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALG 119

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
            C+ +  LA    IH RI+ SK   +  +  SL+  Y KC    +A +VF  + A +V S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179

Query: 490 WNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE-- 546
           + +MI AY Q G   +A+ LF +M  VE I P   TF  +L A    G ++ G+KV    
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 547 -------------SMVKEYGIL--PEEAH-------------YSCMVDLLGRAGKLEIAL 578
                        ++V  YG    P EA              ++ M+    + G  + AL
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
                + ++P+   +     AC     L     I  +++E       +  +L +MYA  G
Sbjct: 300 NLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCG 359

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
              DA      MK ++      C      N +   F+Q+    +  ++Y +++Q
Sbjct: 360 SLDDARRVFNRMKTRDAFS---C------NAMIAAFTQHGRKKQALRIYRRMEQ 404


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 202/621 (32%), Positives = 335/621 (53%), Gaps = 48/621 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN---ALFDQAFSFFLKL 209
           F   +L++  A    +  M  +   MP  D  S N L+ G++     A   Q +   L+ 
Sbjct: 80  FTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLRE 139

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------ 263
           +   V+P   T S M+ +  +LS    G  +H Q ++L + +   V + L+ MY      
Sbjct: 140 E--SVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 264 -------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
                                    ++C M+EDA+ +F+ +V R+ I+WT ++ G  Q+G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   MR +G+  ++YTF   L +C +L  S  G   HA + +       FVG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGS 317

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMYS    I  A+   + M    + +SW A I G+ +N  +EEA+ AFS+M  +   
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+FT  S++ +C+ L SL    Q H   + S     + V ++L+  Y KCGS EDA R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +++  D VSW +++  Y+Q G+A++ I LFEKM+V G++P   TF+ VLSACS +GLV
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLV 496

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G   F+SM K++ I+P + HY+CM+DL  R+G+ + A  FI  +P  P A  W  L +
Sbjct: 497 EKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR   ++++ ++ ++ +LE DP + A YV L +M+A  G   +    R+ M+ +++ KE
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKE 616

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEK 707
           PGCSWI+  NK++ F + ++SH    ++YEKL+ L  ++ + G+            D +K
Sbjct: 617 PGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADK 676

Query: 708 EDRVLYHSERLAVGFGLISLP 728
              + +HSE+LA+ FGLI +P
Sbjct: 677 VHMISHHSEKLAIAFGLIFVP 697



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 186/400 (46%), Gaps = 34/400 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG   H  + +       FV + LV+MYAK G I+    V ++M    +   N L+ G  
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223

Query: 195 KNALFDQAFSFF----------------------LKLDGIDV---------QPNHYTYST 223
           +  + + A   F                      L+L+ +DV           + YT+ +
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+L+A +EGKQ+HA   +  Y     V +AL+ MY KC  +  AE+VF  +  RN
Sbjct: 284 ILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +ISWTA+I G+ Q+   E+ +R    M+ DGI P+++T    ++SCA+L +   G  FH 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     V  A+V +Y   G I +A +   EM      VSW A + G+ +  K +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKAK 462

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSL 462
           E I+ F +M+ N    D  T+  +L ACS    +   C+   S              + +
Sbjct: 463 ETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCM 522

Query: 463 IEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
           I+ Y++ G +++AE    Q+  + D   W +++ +    G
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 153/279 (54%), Gaps = 7/279 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C      E G++ HA IT+T    + FV ++LV+MY+KC  I+   AV
Sbjct: 276 IDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++M   +I S   ++ GY +NA  ++A   F  +++DGI  +P+ +T  ++++ C +L+
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI--KPDDFTLGSVISSCANLA 393

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +++EG Q H   +    +    VSNAL+T+Y KCG +EDA  +F+ +   + +SWTA++ 
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM 350
           G+ Q G  ++ + L   M  +G+ P+  TF   L++C  A L      Y    Q     +
Sbjct: 454 GYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIV 513

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            + D   T ++D+YS  G   EA++ +K+M  S  +  W
Sbjct: 514 PIDDHY-TCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N ++ AY+++GR  +A  +F++M      P   T  A+LSA +HS LV D +++F SM +
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERLFASMPE 107

Query: 551 EYGILPEEAHYSCMVDLLGRAG----KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
                 +   Y+ ++      G     +++    +    ++PT      +       SD 
Sbjct: 108 R-----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDR 162

Query: 607 KMAEFISKQILELDPDDAA-VYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            +   +  Q+L L     A V   L +MYA+ GL  DA    + M+ K +
Sbjct: 163 ALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212



 Score = 45.4 bits (106), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 8/212 (3%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+     + N+   ++L+ A        D ER+F+ +   D VS+N++I  +S  G   +
Sbjct: 69  RVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128

Query: 506 AIILFEKMVV-EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           ++ L+  ++  E +RPT  T  A++   S       G  V    V   G        S +
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV-HCQVLRLGFGAYAFVGSPL 187

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-D 623
           VD+  + G +  A      +  K        +    RC    KM E  +K + +L  D D
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC----KMIE-DAKGLFQLMVDRD 242

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           +  + T+     + GLQ +A +  + M+ + +
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 207/613 (33%), Positives = 327/613 (53%), Gaps = 13/613 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H+ I K     + FV A+L+N Y+ CG + S   V + +   DI     +++ Y +N  F
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + +      +      PN+YT+ T L     L A D  K +H Q +K  Y+    V   L
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L +Y + G M DA  VF  + + +V+ W+ +I  F Q+G   + + L   MRE  + PNE
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +T +  L  CA  + S +G   H  V+K G  L  +V  A++D+Y+   ++  A K   E
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +  S + VSWN  I G+    +  +A   F + +RN  +  E T+SS L AC+ L S+  
Sbjct: 409 L-SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+H   +K+     V V +SLI+ Y KCG  + A+ VF+++   DV SWN++I  YS 
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G  R+A+ + + M     +P   TFL VLS CS++GL+  GQ+ FESM++++GI P   
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+CMV LLGR+G+L+ A+  I  +P +P+  IWR + +A    ++ + A   +++IL++
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P D A YV +SNMYA A   A+    RK MK   + KEPG SWIE    ++ F      
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           H +M  +   L+ L  +    G+            D EK+ R+  HSERLA+ +GL+ +P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767

Query: 729 -AKNKFECSRTLE 740
            ++N+    + L 
Sbjct: 768 SSRNRILIMKNLR 780



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 142/511 (27%), Positives = 239/511 (46%), Gaps = 13/511 (2%)

Query: 100 CSNTVPVTCYSLESL------LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
           C  +V      LES       LD      +L  C ++      +  H  I K   C D F
Sbjct: 26  CGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLF 85

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
            T  L+N Y K G  K  + +  +MP  +  S   L  GYA           + +L    
Sbjct: 86  ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
            + N + +++ L +  SL   +    LH+  +KL Y S   V  AL+  Y  CG ++ A 
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +VFEG++ ++++ W  I++ + ++G +E  L+L+  MR  G  PN YTF  AL +   L 
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
                   H Q++K    L   VG  ++ +Y+ LG++ +A K   EM K+   V W+  I
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMI 320

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           A F +N    EA++ F +M       +EFT SSIL  C++       EQ+H  +VK  F+
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            +++V ++LI+ Y KC   + A ++F++L++ + VSWN++I  Y   G   KA  +F + 
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +   +  T  TF + L AC+    +  G +V    +K      + A  + ++D+  + G 
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA-KKVAVSNSLIDMYAKCGD 499

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           ++ A    + +     A  W  L +    H 
Sbjct: 500 IKFAQSVFNEMETIDVAS-WNALISGYSTHG 529



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 1/300 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            +  +  H  I KT    D  V   L+ +Y + GD+     V  +MP  D+   + ++A 
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + +N   ++A   F+++    V PN +T S++L  C        G+QLH   +K+ +   
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             VSNAL+ +Y KC  M+ A  +F  L  +N +SW  +I G++  G+  K   +      
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           + +   E TF+ AL +CASL +  +G   H   IK   A    V  +++DMY+  G+I  
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    EM ++    SWNA I+G+  +    +A+     M   D   +  T+  +L  CS
Sbjct: 503 AQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 10/347 (2%)

Query: 87  RNDSFPDGF-IDDGCSNTVPVTCYSLESLLDKQFVI-------EVLSYCSREECLELGRR 138
           +ND  P  F I   C N        L   + + FV+        +L+ C+  +C  LG +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H L+ K     D +V+ +L+++YAKC  + + V +  ++   +  S N ++ GY     
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             +AFS F +     V     T+S+ L  C SL+++D G Q+H   +K     K AVSN+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY KCG ++ A+SVF  +   +V SW A+I+G+  HG   + LR++ +M++    PN
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549

Query: 319 EYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             TF   L+ C++      G   F + +   G+       T +V +    G++ +A K +
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           + +    S + W A ++    NQ  EE     ++ +      DE TY
Sbjct: 610 EGIPYEPSVMIWRAMLSASM-NQNNEEFARRSAEEILKINPKDEATY 655


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 206/624 (33%), Positives = 344/624 (55%), Gaps = 16/624 (2%)

Query: 132 CLEL--GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           C+ L  G++ H  + K     D FV ASLV++Y++ G +     V   MP  D+ S N +
Sbjct: 134 CVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAM 193

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G+ +N     A     ++ G  V+ +  T +++L +C     +  G  +H   +K   
Sbjct: 194 ISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL 253

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            S   VSNAL+ MY K G ++DA+ VF+ +  R+++SW +II  ++Q+ D    LR    
Sbjct: 254 DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKG 313

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLG 368
           M+  GI P+  T     +  + L +  +       VI+R     D V G A+V+MY+ LG
Sbjct: 314 MQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLG 373

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSI 427
            +  A     ++ +   ++SWN  + G+ +N    EAI+A++ M    D   ++ T+ SI
Sbjct: 374 YMNCAHTVFDQLPRK-DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSI 432

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + A S + +L    +IH++++K+    +V V + LI+ Y KCG  EDA  +F ++     
Sbjct: 433 IPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS 492

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           V WN++I +   +GR  +A+ LF+ M+ E ++  + TF+++LSACSHSGLV +GQK F+ 
Sbjct: 493 VPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDI 552

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           M KEYGI P   HY CMVDLLGRAG LE A   + N+PI+P A IW  L +AC+ + + +
Sbjct: 553 MQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAE 612

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           +    S ++LE+D ++   YV LSN+YA         + R L + + + K PG S + V 
Sbjct: 613 LGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSE 716
           +K   F++ N++H +  ++Y++LK L  +++ +G+            ++EKE  +  HSE
Sbjct: 673 SKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSE 732

Query: 717 RLAVGFGLISLPAKNKFECSRTLE 740
           RLA+ FG+IS P ++     + L 
Sbjct: 733 RLAIAFGIISTPPRSPIRIFKNLR 756



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/532 (26%), Positives = 260/532 (48%), Gaps = 18/532 (3%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HAL+       +  ++  L+N+Y   GDI    +    +   +I S N +++ Y + 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 197 ALFDQAFS----FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             + +A +     F    G  ++P+ YT+  +L  C SL    +GK++H    K+ +   
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDD 155

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+ +L+ +Y + G+++ A  VF  +  ++V SW A+I+GF Q+G+    L ++  M+ 
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+  +  T    L  CA   +   G + H  V+K G+    FV  A+++MYS  G + +
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +M +    VSWN+ IA + +N     A+  F  M       D  T  S+    S
Sbjct: 276 AQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFS 334

Query: 433 LLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            L        I   +++ ++ + +V +G++L+  Y K G    A  VF QL   D +SWN
Sbjct: 335 QLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWN 394

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIR---PTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +++  Y+QNG A +AI  +  M  E  R   P   T+++++ A SH G +Q G K+   +
Sbjct: 395 TLVTGYTQNGLASEAIDAYNMM--EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL 452

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           +K   +  +    +C++DL G+ G+LE A+     +P   + P W  + A+   H   + 
Sbjct: 453 IKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGEE 510

Query: 609 AEFISKQIL-ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           A  + K +L E    D   +V+L +  + +GL  + ++   +M+ KE   +P
Sbjct: 511 ALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ-KEYGIKP 561



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 177/375 (47%), Gaps = 9/375 (2%)

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
           A+  S   ++  K+LHA  +         +S  L+ +Y+  G +  + S F+ + ++N+ 
Sbjct: 27  ALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIF 86

Query: 286 SWTAIINGFKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           SW +II+ + + G Y + +    +L  +     + P+ YTF   L +C SL +   G   
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKV 143

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H  V K G     FV  ++V +YS  G +  A K   +M       SWNA I+GF +N  
Sbjct: 144 HCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG-SWNAMISGFCQNGN 202

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
              A+   ++M       D  T +SIL  C+    +     IH  ++K   +S+V V ++
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNA 262

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y+K G  +DA+ VF Q+   D+VSWNS+I AY QN     A+  F+ M + GIRP 
Sbjct: 263 LINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD 322

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T +++ S  S     +  + +   +++   +  +    + +V++  + G +  A    
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382

Query: 582 SNLPIKPTAPIWRPL 596
             LP K T   W  L
Sbjct: 383 DQLPRKDTIS-WNTL 396



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 194/407 (47%), Gaps = 11/407 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  +L  C++ + +  G   H  + K  +  D FV+ +L+NMY+K G ++    V
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             QM   D+ S N ++A Y +N     A  FF  +    ++P+  T  ++ +I   LS  
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339

Query: 235 DEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              + +    ++ ++L K  V  NAL+ MY K G M  A +VF+ L +++ ISW  ++ G
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399

Query: 294 FKQHGDYEKPLRLVCLMRE--DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + Q+G   + +    +M E  D I PN+ T+   + + + +     G   HA++IK  + 
Sbjct: 400 YTQNGLASEAIDAYNMMEECRDTI-PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLY 458

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  FV T ++D+Y   G + +A     E+ +  +SV WNA IA    + + EEA++ F  
Sbjct: 459 LDVFVATCLIDLYGKCGRLEDAMSLFYEIPRD-TSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 412 MVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           M+      D  T+ S+L ACS   L+     C  I  +    K  S  H G  +++   +
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIK-PSLKHYG-CMVDLLGR 575

Query: 469 CGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            G  E A E V +     D   W +++ A    G A    +  ++++
Sbjct: 576 AGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/257 (19%), Positives = 120/257 (46%), Gaps = 25/257 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A  +F++ P++  +S + L+  GY    + G++       N       + + C +T+P  
Sbjct: 378 AHTVFDQLPRKDTISWNTLV-TGY---TQNGLASEAIDAYN-------MMEECRDTIP-- 424

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   ++   + ++   S    L+ G + HA + K ++  D FV   L+++Y KCG 
Sbjct: 425 --------NQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++  +++  ++P       N ++A    +   ++A   F  +    V+ +H T+ ++L+ 
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNV 284
           C     +DEG++     M+ +Y  K ++ +   ++ +  + G +E A  +   + +Q + 
Sbjct: 537 CSHSGLVDEGQKCF-DIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 285 ISWTAIINGFKQHGDYE 301
             W A+++  K +G+ E
Sbjct: 596 SIWGALLSACKIYGNAE 612


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 193/617 (31%), Positives = 335/617 (54%), Gaps = 15/617 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA +    +    F+   L++  +  GDI     V   +P   +   N ++ GY++N
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F  A   + K+    V P+ +T+  +L  CG LS +  G+ +HAQ  +L + +   V 
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQ 157

Query: 257 NALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           N L+ +Y KC  +  A +VFEGL   +R ++SWTAI++ + Q+G+  + L +   MR+  
Sbjct: 158 NGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMD 217

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+       L +   L++   G   HA V+K G+     +  ++  MY+  G++  AK
Sbjct: 218 VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAK 277

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               +M KS + + WNA I+G+ +N   ++AI+ F +M+  D   D  + +S + AC+ +
Sbjct: 278 ILFDKM-KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            SL     +   + +S +  +V + S+LI+ + KCGS E A  VF +    DVV W++MI
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +G+AR+AI L+  M  +G+ P + TFL +L AC+HSG+V++G   F  M  ++ I
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKI 455

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P++ HY+C++DLLGRAG L+ A   I  +P++P   +W  L +AC+ H  +++ ++ ++
Sbjct: 456 NPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQ 515

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           Q+  +DP +   YV LSN+YA A L     E R  MK K ++K+ GCSW+EV  ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFR 575

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
             +KSH    ++  +++ +  ++++ G             D E E+ +  HSER+ + +G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYG 635

Query: 724 LISLPAKNKFECSRTLE 740
           LIS P       ++ L 
Sbjct: 636 LISTPQGTTLRITKNLR 652



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 195/436 (44%), Gaps = 6/436 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  C     L++GR  HA + +     D FV   L+ +YAKC  +     V + +P  
Sbjct: 124 HLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLP 183

Query: 182 D--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           +  I S   +++ YA+N    +A   F ++  +DV+P+     ++L     L  +++G+ 
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRS 243

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  MK+   ++  +  +L TMY KCG +  A+ +F+ +   N+I W A+I+G+ ++G 
Sbjct: 244 IHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGF 303

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            +  + L   M    + P+  + T A+++CA + +          V +       F+ +A
Sbjct: 304 AKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSA 363

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DM++  G + E  + + +       V W+A I G+  + +  EAI  +  M R+    
Sbjct: 364 LIDMFAKCGSV-ECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHP 422

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           ++ T+  +L AC+    +       +R+   K        + +I+   + G  + A  V 
Sbjct: 423 NDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVI 482

Query: 480 SQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
             +     V  W +++ A  ++          +++    I P+N+     LS    +  +
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLF--SIDPSNTGHYVQLSNLYAAARL 540

Query: 539 QDGQKVFESMVKEYGI 554
            D        +KE G+
Sbjct: 541 WDRVAEVRVRMKEKGL 556



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 143/297 (48%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+  +  + LE GR  HA + K  +  +  +  SL  MYAKCG + +   +  +M 
Sbjct: 225 LVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMK 284

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +++GYAKN     A   F ++   DV+P+  + ++ ++ C  + ++++ + 
Sbjct: 285 SPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARW 344

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +     +  Y     +S+AL+ M+ KCG +E A SVF+  + R+V+ W+A+I G+  HG 
Sbjct: 345 MDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQ 404

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + + L   M  DG+ PN+ TF   L +C        G+ F  ++    +         
Sbjct: 405 AREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYAC 464

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           I+D+    G + +A + +K M        W A ++   +++  E    A  Q+   D
Sbjct: 465 IIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSID 521



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 5/225 (2%)

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           A   QIH+R++    + +  + + LI A +  G    A +VF  L    V  WN++I+ Y
Sbjct: 35  AQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGY 94

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           S+N   + A++++ KM +  + P + TF  +L AC     +Q G+ V  + V   G   +
Sbjct: 95  SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFV-HAQVFRLGFEAD 153

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPI-KPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
               + ++ L  +  +L  A      LP+ + T   W  + +A   + +   A  I  Q+
Sbjct: 154 VFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQM 213

Query: 617 LELD--PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
            ++D  PD  A+   L+       L+        +MKM  +  EP
Sbjct: 214 RKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMG-LETEP 257


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/657 (33%), Positives = 360/657 (54%), Gaps = 28/657 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC+LF++ P +  ++ + +I  GY+   E G     +         GF  DG        
Sbjct: 55  ACKLFDEMPHKDTVTWNTMI-TGYV---ESGNLGAAWEFLKSMKRRGFQADG-------- 102

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+  S+L        +++  R +   LG++ H+LI K       +  ++L++MYAKC  
Sbjct: 103 -YTFGSILKG------VAHACRHD---LGQQVHSLIVKIGYEQSVYAGSALLDMYAKCER 152

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTML 225
           ++    V + MP  +  S N L+ G+ +    D AF     ++ +G+ V+    T++ +L
Sbjct: 153 VEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDG--TFAPLL 210

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNV 284
            +           QLH + +K       A+ NA LT Y +CG++EDA+ VF+G V  R++
Sbjct: 211 TLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDL 270

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W +++  +  H   E    L   M+  G +P+ YT+T  +++C +  + + G  FHA 
Sbjct: 271 VTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHAL 330

Query: 345 VIKRGMALGDFVGTAIVDMYSGLG-EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           VIKRG+     +  A++ MY  L  +  EA   L    KS   VSWN+ + GF +   +E
Sbjct: 331 VIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSE 390

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           +A++ F  M  +    D++ YS++L++CS L  L   +QIH   VK+ F+SN  V SSLI
Sbjct: 391 DALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLI 450

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y+KCG  EDA + F   T    ++WNS++ AY+Q+G+   A+ LF  M    ++  + 
Sbjct: 451 FMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHV 510

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+AVL+ACSH GLV+ G+ V +SM  +YGI P   HY+C VDL GRAG LE A   I +
Sbjct: 511 TFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDS 570

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P +P A + + L  ACR   ++++A  ++ Q+LE++P++   YV LSNMY       D 
Sbjct: 571 MPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDK 630

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
               +LM+ +++ K PG SWIEV N+++ F ++++SH     VY+ L +LM++++ +
Sbjct: 631 ASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMKRL 687



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 201/415 (48%), Gaps = 4/415 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           H    K+ +    +V  +++  Y+KC  GD+     +  +MP+ D  + N ++ GY ++ 
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
               A+ F   +     Q + YT+ ++L         D G+Q+H+  +K+ Y       +
Sbjct: 82  NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           ALL MY KC  +EDA  VF+G+  RN +SW A+I+GF Q GD +    L+  M+++G+  
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            + TF   L      +   +    H ++IK G+   + +  A +  YS  G + +AK+  
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVF 261

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
                +   V+WN+ +  +  + K E+A   F +M       D +TY+ ++ AC      
Sbjct: 262 DGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHK 321

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG--SWEDAERVFSQLTAADVVSWNSMIK 495
              +  H+ ++K   E +V + ++LI  Y K    S E A  +F  + + D VSWNS++ 
Sbjct: 322 NYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILT 381

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +SQ G +  A+ LF  M        +  + AVL +CS   ++Q GQ++    VK
Sbjct: 382 GFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVK 436


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 200/529 (37%), Positives = 313/529 (59%), Gaps = 19/529 (3%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P+   Y+ +L  C  L  + +GK +H   M  ++ +   + N++L MY KCG +E A 
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 274 SVFEGLVQRNVISWTAIINGFKQHG---DYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            VF+ +  ++V++WT++I G+ Q G        L L   M  DG+ PNE+  +  +  C 
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L +   G   H    K G     FVG+++VDMY+  GE+ E++    E+ +S + VSWN
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDEL-ESKNEVSWN 265

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+GF R  + EEA+  F +M R      EFTYS++L + S   SL   + +H+ ++KS
Sbjct: 266 ALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKS 325

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             +   +VG++L+  Y K G+  DA++VF +L   DVVS NSM+  Y+Q+G  ++A+ LF
Sbjct: 326 GKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELF 385

Query: 511 EKMV--VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           E+M+  VE I P + TFL+VL+ACSH+GL+ +G   FE M K+YG+ P+ +HY+ +VDL 
Sbjct: 386 EEMMLWVE-IEPNDITFLSVLTACSHAGLLDEGLYYFELM-KKYGLEPKLSHYTTVVDLF 443

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L+ A  FI  +PI+P A IW  L  A + H + +M  + ++++LELDP     + 
Sbjct: 444 GRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHT 503

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            LSN+YA AG   D  + RK MK   + KEP CSW+E+ N ++ F + + SH +  KVYE
Sbjct: 504 LLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563

Query: 689 KLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLIS 726
             + L Q+I++IG+  +           EKE  + YHSE+LA+ F L++
Sbjct: 564 MWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLN 612



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 220/450 (48%), Gaps = 10/450 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+    ++L  C+    L+ G+  H  +  +    D  +  S++ MYAKCG ++    V 
Sbjct: 90  DRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVF 149

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFS---FFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +M   D+ +   ++ GY+++     A +    FL++    ++PN +  S+++  CG L 
Sbjct: 150 DEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLG 209

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +  +GKQ+H    K  +     V ++L+ MY +CG + ++  VF+ L  +N +SW A+I+
Sbjct: 210 SCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALIS 269

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           GF + G+ E+ L L   M+ +G    E+T++  L S ++  +   G   HA ++K G  L
Sbjct: 270 GFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKL 329

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ- 411
             +VG  ++ MY+  G I +AKK    + K    VS N+ + G+ ++   +EA+E F + 
Sbjct: 330 VGYVGNTLLHMYAKSGNICDAKKVFDRLVK-VDVVSCNSMLIGYAQHGLGKEAVELFEEM 388

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+  +   ++ T+ S+L ACS    L         + K   E  +   +++++ + + G 
Sbjct: 389 MLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGL 448

Query: 472 WEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVL 529
            + A+    ++    +   W +++ A   +          +K++ ++   P   T L+ +
Sbjct: 449 LDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNI 508

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEA 559
            A   +G  +D  KV + M K+ G+  E A
Sbjct: 509 YAS--AGQWKDVAKVRKEM-KDSGLKKEPA 535


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 201/621 (32%), Positives = 334/621 (53%), Gaps = 48/621 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN---ALFDQAFSFFLKL 209
           F   +L++  A    +  M  +   MP  D  S N L+ G++     A   Q +   L+ 
Sbjct: 80  FTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLRE 139

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------ 263
           +   V+P   T S M+ +  +LS    G  +H Q ++L + +   V + L+ MY      
Sbjct: 140 E--SVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 264 -------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
                                    ++C M+EDA+ +F+ +V R+ I+WT ++ G  Q+G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   MR +G+  ++YTF   L +C +L     G   HA + +       FVG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMYS    I  A+   + M    + +SW A I G+ +N  +EEA+ AFS+M  +   
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+FT  S++ +C+ L SL    Q H   + S     + V ++L+  Y KCGS EDA R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +++  D VSW +++  Y+Q G+A++ I LFEKM+  G++P   TF+ VLSACS +GLV
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G   F+SM K++GI+P + HY+CM+DL  R+G+ + A  FI  +P  P A  W  L +
Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR   ++++ ++ ++ +LE DP + A YV L +M+A  G   +    R+ M+ +++ KE
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKE 616

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEK 707
           PGCSWI+  NK++ F + ++SH    ++YEKL+ L  ++ + G+            D +K
Sbjct: 617 PGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADK 676

Query: 708 EDRVLYHSERLAVGFGLISLP 728
              + +HSE+LA+ FGLI +P
Sbjct: 677 VHMISHHSEKLAIAFGLIFVP 697



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 187/400 (46%), Gaps = 34/400 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG   H  + +       FV + LV+MYAK G I+    V ++M    +   N L+ G  
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223

Query: 195 KNALFDQAFSFF----------------------LKLDGIDV---------QPNHYTYST 223
           +  + + A   F                      L+L+ +DV           + YT+ +
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+L+A++EGKQ+HA   +  Y     V +AL+ MY KC  +  AE+VF  +  RN
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +ISWTA+I G+ Q+   E+ +R    M+ DGI P+++T    ++SCA+L +   G  FH 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     V  A+V +Y   G I +A +   EM      VSW A + G+ +  K +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKAK 462

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSL 462
           E I+ F +M+ N    D  T+  +L ACS    +   C+   S              + +
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522

Query: 463 IEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
           I+ Y++ G +++AE    Q+  + D   W +++ +    G
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 155/279 (55%), Gaps = 7/279 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C     LE G++ HA IT+T    + FV ++LV+MY+KC  I+   AV
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++M   +I S   ++ GY +NA  ++A   F  +++DGI  +P+ +T  ++++ C +L+
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI--KPDDFTLGSVISSCANLA 393

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +++EG Q H   +    +    VSNAL+T+Y KCG +EDA  +F+ +   + +SWTA++ 
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM 350
           G+ Q G  ++ + L   M  +G+ P+  TF   L++C  A L      Y F +     G+
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY-FDSMQKDHGI 512

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
              D   T ++D+YS  G   EA++ +K+M  S  +  W
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N ++ AY+++GR  +A  +F++M      P   T  A+LSA +HS LV D +++F SM +
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERLFASMPE 107

Query: 551 EYGILPEEAHYSCMVDLLGRAG----KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
                 +   Y+ ++      G     +++    +    ++PT      +       SD 
Sbjct: 108 R-----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDR 162

Query: 607 KMAEFISKQILELDPDDAA-VYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            +   +  Q+L L     A V   L +MYA+ GL  DA    + M+ K +
Sbjct: 163 ALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212



 Score = 45.8 bits (107), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 8/212 (3%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+     + N+   ++L+ A        D ER+F+ +   D VS+N++I  +S  G   +
Sbjct: 69  RVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128

Query: 506 AIILFEKMVV-EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           ++ L+  ++  E +RPT  T  A++   S       G  V    V   G        S +
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV-HCQVLRLGFGAYAFVGSPL 187

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-D 623
           VD+  + G +  A      +  K        +    RC    KM E  +K + +L  D D
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC----KMIE-DAKGLFQLMVDRD 242

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           +  + T+     + GLQ +A +  + M+ + +
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 215/681 (31%), Positives = 340/681 (49%), Gaps = 63/681 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---DIKSMVAVVKQMP 179
           VL  C     L  G   HA++    +  + F+  S+V MY +CG   D   M   V +  
Sbjct: 133 VLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERK 192

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDG---IDVQPNHYTYSTMLAICGSLSAIDE 236
             DI S N +LA Y +      A     ++     + ++P+  T   +L  C S+ A+  
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQH 252

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ+H  +++   +    V NAL++MY KC  M +A  VFEG+ +++V+SW A++ G+ Q
Sbjct: 253 GKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQ 312

Query: 297 HGDYEKPLRLVCLMRED-----------------------------------GIDPNEYT 321
            G ++  L L  +M+E+                                   G++PN  T
Sbjct: 313 IGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVT 372

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALG-------DFVGTAIVDMYSGLGEIWEAK 374
               L+ CAS+     G   HA VIK  + L          V   ++DMY+       A+
Sbjct: 373 LASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVAR 432

Query: 375 KQLKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKAC 431
                + GK  + V+W   I G+ ++ +  +A++ F+Q+ +   +   + FT S  L AC
Sbjct: 433 SIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMAC 492

Query: 432 SLLPSLATCEQIHSRIVKSKFESNV-HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           + L  L    Q+H+  ++++ ES V +VG+ LI+ Y+K G  + A  VF  +   +VVSW
Sbjct: 493 ARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSW 552

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            S++  Y  +GR  +A+ LF++M   G      TFL VL ACSHSG+V  G   F  MVK
Sbjct: 553 TSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVK 612

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
            +GI P   HY+CMVDLLGRAG+L  A+  I N+ ++PTA +W  L +A R H+++++ E
Sbjct: 613 GFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGE 672

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
           + + ++ EL  ++   Y  LSN+YA A    D    R LMK   I K PGCSWI+     
Sbjct: 673 YAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKST 732

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLA 719
             FF  ++SH E  ++Y  L  L+++I+D+G+            D EK D +  HSE+LA
Sbjct: 733 TTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLA 792

Query: 720 VGFGLISLPAKNKFECSRTLE 740
           V +G+++          + L 
Sbjct: 793 VAYGILTTAPGQPIRIHKNLR 813



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 229/517 (44%), Gaps = 60/517 (11%)

Query: 159 VNMYAKCGDIKSMVAVVKQM--PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           V  Y +CG     V++++++   +  +   N L+    K  L D    F+ ++  +   P
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +HYT+  +L  CG + ++  G  +HA        S   + N+++ MY +CG ++DA  +F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185

Query: 277 EGLVQR---NVISWTAIINGFKQHGDYEKPLRLVCLMRED---GIDPNEYTFTVALASCA 330
           + +++R   +++SW +I+  + Q G     LR+   M       + P+  T    L +CA
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           S+     G   H   ++ G+    FVG A+V MY+   ++ EA K  + + K    VSWN
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGI-KKKDVVSWN 304

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS------------------------- 425
           A + G+ +    + A+  F  M   D   D  T+S                         
Sbjct: 305 AMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLY 364

Query: 426 ----------SILKACSLLPSLATCEQIHSRIVKSKF-------ESNVHVGSSLIEAYNK 468
                     S+L  C+ + +L   +Q H+ ++K+         E ++ V + LI+ Y K
Sbjct: 365 GLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAK 424

Query: 469 CGSWEDAERVFSQLTAAD--VVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIRPTNST 524
           C S+  A  +F  +   D  VV+W  MI  Y+Q+G A  A+ LF ++  +   ++P   T
Sbjct: 425 CKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFT 484

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIALIFIS 582
               L AC+  G ++ G+++    ++       E  Y  +C++D+  ++G ++ A     
Sbjct: 485 LSCALMACARLGELRLGRQLHAYALRNEN--ESEVLYVGNCLIDMYSKSGDIDAARAVFD 542

Query: 583 NLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           N+ ++     W  L      H   + A  +  Q+ +L
Sbjct: 543 NMKLRNVVS-WTSLMTGYGMHGRGEEALHLFDQMQKL 578



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 210/470 (44%), Gaps = 81/470 (17%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           YSL+   D   ++ +L  C+    L+ G++ H    +  +  D FV  +LV+MYAKC  +
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGI--------- 212
                V + +   D+ S N ++ GY++   FD A S F       +KLD I         
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345

Query: 213 -------------------DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK----LQY 249
                               ++PN  T +++L+ C S+ A+  GKQ HA  +K    L +
Sbjct: 346 AQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNW 405

Query: 250 LSK---TAVSNALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPL 304
             K     V N L+ MY KC     A S+F+ +    +NV++WT +I G+ QHG+    L
Sbjct: 406 NDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDAL 465

Query: 305 RLVCLM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIV 361
           +L   +  ++  + PN +T + AL +CA L    +G   HA  ++    +   +VG  ++
Sbjct: 466 KLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLI 525

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMYS  G+I  A+     M K  + VSW + + G+  + + EEA+  F QM +   A D 
Sbjct: 526 DMYSKSGDIDAARAVFDNM-KLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDG 584

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T+  +L ACS           HS +V                       + D  + F  
Sbjct: 585 ITFLVVLYACS-----------HSGMVDQGMI-----------------YFHDMVKGFGI 616

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
              A+   +  M+    + GR  +A+ L + M +E   PT   ++A+LSA
Sbjct: 617 TPGAE--HYACMVDLLGRAGRLNEAMELIKNMSME---PTAVVWVALLSA 661


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/579 (32%), Positives = 323/579 (55%), Gaps = 5/579 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L +CS+ + L  G   HA + KT    D F++  ++NMYAKCG       V  +M   +
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + +++GY +      A   + ++  +   PN Y ++++++ C SLSA+  G+++H+
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQKIHS 125

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +++K  Y S + VSN+L++MY+KC    DA SVF    + N +S+ A+I GF ++   E+
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L    LMR+ G+ P+ + F   L  C +  N   G   H Q +K  +    F+G  I+ 
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDE 421
           MYS L  I EA+K  + + +    +SWN  IA         + +  F  M    +   D+
Sbjct: 246 MYSELNLIQEAEKAFRLI-EEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDD 304

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT++S L AC+ L S++  +QIH+ +++++   ++ VG++L+  Y KCG    A  +FS+
Sbjct: 305 FTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSK 364

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   ++VSWN++I  +  +G   +A+ LFE+M   GIRP + TF+ +L+AC+H+GLV  G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           Q  F SM + YGI P+  H+SC++D+LGRAG+L  A  ++   P      +   L +A R
Sbjct: 425 QLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H D+ + E ++K +L+L P   + YV LSN+YA  G+     E RK +K   + KEPG 
Sbjct: 485 LHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGH 544

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
           S IEV   + +F   + +H  + ++   LK L   + ++
Sbjct: 545 SLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGEV 583



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T S++L  C    A+  G  LHA  +K    S   +SN +L MY KCG    A  VF+ +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            ++N++SW+A+I+G+ Q G+   P   + L  +  + PNEY F   +++CASL    +G 
Sbjct: 65  FEKNLVSWSAMISGYDQAGE---PQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H++ +K G     FV  +++ MY    +  +A           + VS+NA I GF  N
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNT-PEPNCVSYNALITGFVEN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           Q+ E  +E F  M +     D F +  +L  C+   +L    ++H + VK   +S   +G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GI 518
           + +I  Y++    ++AE+ F  +   DV+SWN++I A S      K + +F+ M  E  +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           RP + TF + L+AC+    +  G+++   +++
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/633 (31%), Positives = 337/633 (53%), Gaps = 48/633 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN---ALFDQAFSFFLKL 209
           F   +L++  A    +  M  +   MP  D  S N L+ G++     A   Q +   L+ 
Sbjct: 80  FTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLRE 139

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY------ 263
           +   V+P   T S M+ +  +LS    G  +H Q ++L + +   V + L+ MY      
Sbjct: 140 E--SVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLI 197

Query: 264 -------------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
                                    ++C M+EDA+ +F+ +V R+ I+WT ++ G  Q+G
Sbjct: 198 RDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG 257

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   MR +G+  ++YTF   L +C +L     G   HA + +       FVG+
Sbjct: 258 LQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGS 317

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMYS    I  A+   + M    + +SW A I G+ +N  +EEA+ AFS+M  +   
Sbjct: 318 ALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIK 376

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+FT  S++ +C+ L SL    Q H   + S     + V ++L+  Y KCGS EDA R+
Sbjct: 377 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRL 436

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +++  D VSW +++  Y+Q G+A++ I LFEKM+  G++P   TF+ VLSACS +GLV
Sbjct: 437 FDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLV 496

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G   F+SM K++GI+P + HY+CM+DL  R+G+ + A  FI  +P  P A  W  L +
Sbjct: 497 EKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR   ++++ ++ ++ +LE DP + A YV L +M+A  G   +    R+ M+ +++ KE
Sbjct: 557 SCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKE 616

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEK 707
           PGCSWI+  NK++ F + ++SH    ++YEKL+ L  ++ + G+            D +K
Sbjct: 617 PGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADK 676

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              + +HSE+LA+ FGLI +P +      + L 
Sbjct: 677 VHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 187/400 (46%), Gaps = 34/400 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG   H  + +       FV + LV+MYAK G I+    V ++M    +   N L+ G  
Sbjct: 164 LGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLL 223

Query: 195 KNALFDQAFSFF----------------------LKLDGIDV---------QPNHYTYST 223
           +  + + A   F                      L+L+ +DV           + YT+ +
Sbjct: 224 RCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGS 283

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  CG+L+A++EGKQ+HA   +  Y     V +AL+ MY KC  +  AE+VF  +  RN
Sbjct: 284 ILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRN 343

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           +ISWTA+I G+ Q+   E+ +R    M+ DGI P+++T    ++SCA+L +   G  FH 
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     V  A+V +Y   G I +A +   EM      VSW A + G+ +  K +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTALVTGYAQFGKAK 462

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSL 462
           E I+ F +M+ N    D  T+  +L ACS    +   C+   S              + +
Sbjct: 463 ETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522

Query: 463 IEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
           I+ Y++ G +++AE    Q+  + D   W +++ +    G
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 155/279 (55%), Gaps = 7/279 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D+     +L+ C     LE G++ HA IT+T    + FV ++LV+MY+KC  I+   AV
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++M   +I S   ++ GY +NA  ++A   F  +++DGI  +P+ +T  ++++ C +L+
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGI--KPDDFTLGSVISSCANLA 393

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +++EG Q H   +    +    VSNAL+T+Y KCG +EDA  +F+ +   + +SWTA++ 
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM 350
           G+ Q G  ++ + L   M  +G+ P+  TF   L++C  A L      Y F +     G+
Sbjct: 454 GYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY-FDSMQKDHGI 512

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
              D   T ++D+YS  G   EA++ +K+M  S  +  W
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGW 551



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 14/170 (8%)

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N ++ AY+++GR  +A  +F++M      P   T  A+LSA +HS LV D +++F SM +
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMP----DPNLFTRNALLSALAHSRLVPDMERLFASMPE 107

Query: 551 EYGILPEEAHYSCMVDLLGRAG----KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
                 +   Y+ ++      G     +++    +    ++PT      +       SD 
Sbjct: 108 R-----DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDR 162

Query: 607 KMAEFISKQILELDPDDAA-VYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            +   +  Q+L L     A V   L +MYA+ GL  DA    + M+ K +
Sbjct: 163 ALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 8/212 (3%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+     + N+   ++L+ A        D ER+F+ +   D VS+N++I  +S  G   +
Sbjct: 69  RVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPAR 128

Query: 506 AIILFEKMVV-EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           ++ L+  ++  E +RPT  T  A++   S       G  V    V   G        S +
Sbjct: 129 SVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV-HCQVLRLGFGAYAFVGSPL 187

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-D 623
           VD+  + G +  A      +  K        +    RC    KM E  +K + +L  D D
Sbjct: 188 VDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRC----KMIE-DAKGLFQLMVDRD 242

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           +  + T+     + GLQ +A +  + M+ + +
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGV 274


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 213/676 (31%), Positives = 330/676 (48%), Gaps = 58/676 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V   C     +  G   HAL   T    + FV  +LV MY++CG +     V  +MP  D
Sbjct: 133 VFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWD 192

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S N ++  YAK      A   F K+ +    +P+  T   +L  C S+     GKQ H
Sbjct: 193 VVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFH 252

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +  + +    V N L+ MY K GMM++A +VF  +  ++V+SW A++ G+ Q G +E
Sbjct: 253 GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312

Query: 302 KPLRLVCLMRED-----------------------------------GIDPNEYTFTVAL 326
             +RL   M+E+                                   GI PNE T    L
Sbjct: 313 DAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMAL-----GD--FVGTAIVDMYSGLGEIWEAKKQLKE 379
           + CAS+     G   H   IK  M L     GD   V   ++DMY+   ++  A+     
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS 432

Query: 380 MG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPS 436
           +  K    V+W   I G+ ++    +A+E  S+M   D     + FT S  L AC+ L +
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 437 LATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           L+  +QIH+  ++++  +  + V + LI+ Y KCG   DA  VF  +   + V+W S++ 
Sbjct: 493 LSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y  +G   +A+ +FE+M   G +    T L VL ACSHSG++  G + F  M  ++G+ 
Sbjct: 553 GYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVS 612

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+C+VDLLGRAG+L  AL  I  +P++P   +W  L + CR H  +++ E+ +K+
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKK 672

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           I EL  ++   Y  LSNMYA AG   D    R LM+ K I K PGCSW+E       FF 
Sbjct: 673 ITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFV 732

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            +K+H    ++Y+ L   MQ+I+DIG+            D EK+D +  HSE+LA+ +G+
Sbjct: 733 GDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792

Query: 725 ISLPAKNKFECSRTLE 740
           ++ P       ++ L 
Sbjct: 793 LTTPQGAAIRITKNLR 808



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 217/500 (43%), Gaps = 51/500 (10%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLD--IASCNCLLAGYAKNALFDQAFSFFLKLDG 211
           +T+ L++ Y   G +   V+++++ P  D  +   N L+  Y  N   ++  S F  +  
Sbjct: 61  LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHS 120

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           +   P++YT+  +   CG +S++  G   HA +    ++S   V NAL+ MY +CG + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSD 180

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCA 330
           A  VF+ +   +V+SW +II  + + G  +  L +   M  E G  P++ T    L  CA
Sbjct: 181 ARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCA 240

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           S+    +G  FH   +   M    FVG  +VDMY+  G + EA      M      VSWN
Sbjct: 241 SVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNM-PVKDVVSWN 299

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS------------------------- 425
           A +AG+ +  + E+A+  F QM       D  T+S                         
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 426 ----------SILKACSLLPSLATCEQIHSRIVKSKFE--SNVH-----VGSSLIEAYNK 468
                     S+L  C+ + +L   ++IH   +K   +   N H     V + LI+ Y K
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAK 419

Query: 469 CGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNST 524
           C   + A  +F  L+    DVV+W  MI  YSQ+G A KA+ L  +M  E    RP   T
Sbjct: 420 CKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
               L AC+    +  G+++    ++           +C++D+  + G +  A +   N+
Sbjct: 480 ISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM 539

Query: 585 PIKPTAPIWRPLFAACRCHS 604
            ++     W  L      H 
Sbjct: 540 -MEKNEVTWTSLMTGYGMHG 558



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 209/479 (43%), Gaps = 91/479 (18%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  C+      LG+++H     + +  + FV   LV+MYAK G +     V 
Sbjct: 228 DDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVF 287

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGI---------------- 212
             MP  D+ S N ++AGY++   F+ A   F       +K+D +                
Sbjct: 288 SNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGY 347

Query: 213 ------------DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ-------YLSKT 253
                        ++PN  T  ++L+ C S+ A+  GK++H   +K         +  + 
Sbjct: 348 EALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDEN 407

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            V N L+ MY KC  ++ A ++F+ L   +R+V++WT +I G+ QHGD  K L L+  M 
Sbjct: 408 MVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467

Query: 312 EDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-ALGDFVGTAIVDMYSGLG 368
           E+     PN +T + AL +CASL    +G   HA  ++    A+  FV   ++DMY+  G
Sbjct: 468 EEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCG 527

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           +I +A+     M    + V+W + + G+  +   EEA+  F +M R     D  T   +L
Sbjct: 528 DIGDARLVFDNM-MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVL 586

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS           HS ++    E                         F+++     V
Sbjct: 587 YACS-----------HSGMIDQGME------------------------YFNRMKTDFGV 611

Query: 489 S-----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           S     +  ++    + GR   A+ L E+M +E   P    ++A+LS C   G V+ G+
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPME---PPPVVWVALLSCCRIHGKVELGE 667



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 153/310 (49%), Gaps = 12/310 (3%)

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-SWNAQIAGFFR 398
           + H +++  G+   +   + ++  Y  LG +  A   L+    S + V  WN+ I  +  
Sbjct: 46  LIHQKLLSFGILTLNLT-SHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGN 104

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N +  + + +F  M       D +T+  + KAC  + S+   +  H+    + F SNV V
Sbjct: 105 NGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFV 164

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-G 517
           G++L+  Y++CGS  DA +VF ++   DVVSWNS+I++Y++ G+ + A+ +F KM  E G
Sbjct: 165 GNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFG 224

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            RP + T + VL  C+  G    G++ F        ++      +C+VD+  + G ++ A
Sbjct: 225 FRPDDITLVNVLPPCASVGTRSLGKQ-FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEA 283

Query: 578 LIFISNLPIKPTAPIWRPLFAA----CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
               SN+P+K     W  + A      R    +++ E + ++ +++   D   +    + 
Sbjct: 284 NTVFSNMPVKDVVS-WNAMVAGYSQIGRFEDAVRLFEQMQEEKIKM---DVVTWSAAISG 339

Query: 634 YAEAGLQADA 643
           YA+ GL  +A
Sbjct: 340 YAQRGLGYEA 349


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 218/654 (33%), Positives = 352/654 (53%), Gaps = 52/654 (7%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  C  E  L  G+  H+L  K+ +    + +   + +Y+KCG +       + +   
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 182 DIASCNCLLAGYAKNA-------LFDQ------------------------AFSFFLKLD 210
           ++ S N ++A YAK +       LFDQ                        A   F  + 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 211 GIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
            + +  + +T S ++ A C  +  I    QLH+  +   + S  +V+NALLT Y K G +
Sbjct: 133 EMGLDMDGFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 270 EDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +DA+ VF G+   R+ +SW ++I  + QH +  K L L   M   G++ + +T    L +
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
              L +   G  FH Q+IK G      VG+ ++D+YS  G      +++ E       V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 389 WNAQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           WN  ++G+ +N++  E+A+E F QM       ++ ++  ++ ACS L S +  +QIHS  
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 448 VKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +KS   SN + V ++LI  Y+KCG+ +DA R+F ++   + VS NSMI  Y+Q+G   ++
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF+ M+   I PT+ TF++VLSAC+H+G V++G   F  M +++ I PE  HYSCM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LLGRAGKL  A   I+ +P  P +  W  L  ACR H ++++A   + Q+L+L+P +AA 
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           YV LSNMYA AG   +    RK M+ + + K+PGCSWIEV  +I+ F +++ SH  + ++
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609

Query: 687 YEKLKQLMQQ--------------IEDIGHTDNEKEDRVLYHSERLAVGFGLIS 726
           YE L+++  +              ++D G    EKE R+ +HSE+LAV FGLIS
Sbjct: 610 YEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 185/390 (47%), Gaps = 21/390 (5%)

Query: 36  TVEVKEPFASYSACQ--LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN----GYSTRND 89
           +V V   F SY +    L     K   L  +  +F G   I ++ +S N     Y    +
Sbjct: 162 SVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDE-VSWNSMIVAYGQHQE 220

Query: 90  -SFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
            S   G   +     + V  ++L S+L     +E LS          G ++H  + KT  
Sbjct: 221 GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG---------GLQFHGQLIKTGF 271

Query: 149 CGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFF 206
             +  V + L+++Y+KC G +     V +++   D+   N +++GY++N  F + A   F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIK 265
            ++ GI  +PN  ++  +++ C +LS+  +GKQ+H+  +K    S + +V NAL+ MY K
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG ++DA  +F+ + + N +S  ++I G+ QHG   + L L   M E  I P   TF   
Sbjct: 392 CGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 451

Query: 326 LASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           L++CA       G+  F+    K  +       + ++D+    G++ EA+  +  M  + 
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            S+ W + +     +   E A++A +Q+++
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 34/282 (12%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK------ 375
           F   L +C + R+   G   H+  IK  +    +     + +YS  G +  A+K      
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 376 ------------------------QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
                                   QL +       VS+N  I+ +    +T  A+  FS 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M       D FT S+++ AC     +    Q+HS  V S F+S V V ++L+  Y K G 
Sbjct: 131 MREMGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 472 WEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            +DA+RVF  +    D VSWNSMI AY Q+    KA+ LF++MV  G+     T  +VL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           A +    +  G +    ++K  G        S ++DL  + G
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCG 289


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 198/619 (31%), Positives = 348/619 (56%), Gaps = 31/619 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L LG + HA   K+    D  V  + ++MYAKC +++    +  +   L+
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLN 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY++     +A   F +L    +  +  + S +   C  +  + EG Q++ 
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYD 364

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+NA + MY KC  + +A  VF+ + +R+ +SW AII   +Q+G   +
Sbjct: 365 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 424

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGDFVGTAI 360
            L L   M    I+P+E+TF   L +C       +GY    H+ ++K GMA    VG ++
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSVLKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSL 481

Query: 361 VDMYSGLGEIWEAKK-------------QLKEMGKSASS------VSWNAQIAGFFRNQK 401
           +DMYS  G I EA+K              ++E+ K  +       VSWN+ I+G+   ++
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E+A   F++M+      D+FTY+++L  C+ L S    +QIH++++K + +S+V++ S+
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISST 601

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y+KCG   D+  +F +    D V+WN+MI  Y+ +G+  +AI LFE+M++E I+P 
Sbjct: 602 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 661

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + TF+++L AC+H GL+  G + F  M ++YG+ P+  HYS MVD+LG++GK++ AL  I
Sbjct: 662 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 721

Query: 582 SNLPIKPTAPIWRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
             +P +    IWR L   C  H +++++AE  +  +L LDP D++ Y  LSN+YA+AG+ 
Sbjct: 722 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 781

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL---MQQI 697
               + R+ M+  ++ KEPGCSW+E+ ++++ F   +K+H    ++YE+L  +   M+  
Sbjct: 782 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF 841

Query: 698 ED---IGHTDNEKEDRVLY 713
           +D   +   + E+ED+  Y
Sbjct: 842 DDSSFVPGVEVEEEDQWCY 860



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 178/644 (27%), Positives = 297/644 (46%), Gaps = 52/644 (8%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYM---NIEEKGISRNGYSTRN----DSFPDGFIDDG 99
           SA  +F++ P R  +S + +I NGY    N+ +     N    R+    +S   G++ +G
Sbjct: 59  SASMVFDRMPLRDVVSWNKMI-NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNG 117

Query: 100 CSNTVPVTCYSLESLLD----------KQFVIEVLSYCSREECLELGRRYHALITKTAVC 149
                  T  S+E  +D          + F I +L  CS  E   LG + H ++ +    
Sbjct: 118 ------ETLKSIEVFVDMGRAGTEFDGRTFAI-ILKVCSCLEDTSLGMQIHGVVVRVGCD 170

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            D    ++L++MYAK       + V + +P  +  S + ++AG  +N L   A  FF ++
Sbjct: 171 TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 230

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
             ++   +   Y+++L  C +LS +  G QLHA  +K  + +   V  A L MY KC  M
Sbjct: 231 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 290

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +DA+ +F+     N  S+ A+I G+ Q     K L L   +   G+  +E + +    +C
Sbjct: 291 QDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRAC 350

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A ++    G   +   IK  ++L   V  A +DMY     + EA +   EM +   +VSW
Sbjct: 351 ALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-RRRDAVSW 409

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA IA   +N K  E +  F  M+R+    DEFT+ S+LKAC+   SL    +IHS IVK
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVK 468

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--------TAADV------------VS 489
           S   SN  VG SLI+ Y+KCG  E+AE++ S+         T  ++            VS
Sbjct: 469 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVS 528

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNS+I  Y    ++  A +LF +M+  GI P   T+  VL  C++      G+++   ++
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588

Query: 550 KEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           K+   L  + +  S +VD+  + G L  + +      ++     W  +      H   + 
Sbjct: 589 KKE--LQSDVYISSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAHHGKGEE 645

Query: 609 A-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           A +   + ILE    +   ++++    A  GL     E   +MK
Sbjct: 646 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 689



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 233/482 (48%), Gaps = 34/482 (7%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+++  LELG++ HA +  +      FV   L+ +Y    D  S   V  +MP  D+ S 
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 187 NCLLAGYAK-NALFDQAFSF------------------------------FLKLDGIDVQ 215
           N ++ GYAK N +   +F F                              F+ +     +
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +  T++ +L +C  L     G Q+H   +++   +    ++ALL MY K     ++  V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+ ++N +SW+AII G  Q+      L+    M++     ++  +   L SCA+L   
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   HA  +K   A    V TA +DMY+    + +A+  L +  ++ +  S+NA I G
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI-LFDKSENLNRQSYNAMITG 314

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + + +   +A+  F +++ +    DE + S + +AC+L+  L+   QI+   +KS    +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLD 374

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V V ++ I+ Y KC +  +A RVF ++   D VSWN++I A+ QNG+  + + LF  M+ 
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             I P   TF +VL AC+  G +  G ++  S+VK  G+    +    ++D+  + G +E
Sbjct: 435 SRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIE 492

Query: 576 IA 577
            A
Sbjct: 493 EA 494


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/572 (33%), Positives = 320/572 (55%), Gaps = 5/572 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L +CS+ + L  G   HA + KT    D F++  ++NMYAKCG       V  +M   +
Sbjct: 9   LLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKN 68

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + +++GY +      A   + ++  +   PN Y ++++++ C SLSA+  G+++H+
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQKIHS 125

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +++K  Y S + VSN+L++MY+KC    DA SVF    + N +S+ A+I GF ++   E+
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L    LMR+ G+ P+ + F   L  C +  N   G   H Q +K  +    F+G  I+ 
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDE 421
           MYS L  I EA+K  + + +    +SWN  IA         + +  F  M    +   D+
Sbjct: 246 MYSELNLIQEAEKAFRLI-EEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDD 304

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT++S L AC+ L S++  +QIH+ +++++   ++ VG++L+  Y KCG    A  +FS+
Sbjct: 305 FTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSK 364

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   ++VSWN++I  +  +G   +A+ LFE+M   GIRP + TF+ +L+AC+H+GLV  G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           Q  F SM + YGI P+  H+SC++D+LGRAG+L  A  ++   P      +   L +A R
Sbjct: 425 QLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASR 484

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H D+ + E ++K +L+L P   + YV LSN+YA  G+     E RK +K   + KEPG 
Sbjct: 485 LHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGH 544

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           S IEV   + +F   + +H  + ++   LK L
Sbjct: 545 SLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 170/332 (51%), Gaps = 5/332 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T S++L  C    A+  G  LHA  +K    S   +SN +L MY KCG    A  VF+ +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            ++N++SW+A+I+G+ Q G+   P   + L  +  + PNEY F   +++CASL    +G 
Sbjct: 65  FEKNLVSWSAMISGYDQAGE---PQMAIDLYSQMFLVPNEYVFASVISACASLSAVTLGQ 121

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H++ +K G     FV  +++ MY    +  +A           + VS+NA I GF  N
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNT-PEPNCVSYNALITGFVEN 180

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           Q+ E  +E F  M +     D F +  +L  C+   +L    ++H + VK   +S   +G
Sbjct: 181 QQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIG 240

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GI 518
           + +I  Y++    ++AE+ F  +   DV+SWN++I A S      K + +F+ M  E  +
Sbjct: 241 NVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNV 300

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           RP + TF + L+AC+    +  G+++   +++
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 198/565 (35%), Positives = 315/565 (55%), Gaps = 4/565 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GRR H  + KT +  D FV +SL+NMYAKC      + +  + P  D+   N +++ Y K
Sbjct: 125 GRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFK 184

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   + A   F K+  +  +PN  T++ +++ C  L  ++ GK++H + ++ + L    V
Sbjct: 185 DGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFV 244

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            +AL+ MY KCG +E A+ VFE + ++N I+W A+I G+   GD    + L+  M ++G 
Sbjct: 245 LSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGT 304

Query: 316 DPNEYTFT-VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
            P   T T +  AS  S++  H G   H  +++  + +  F+  +++D Y   G +  A+
Sbjct: 305 KPTLMTLTSIIYASSRSVQLRH-GKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAE 363

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              + + K+   VSWN  I+G        +A+  +  M  +    D  T+SS L ACS L
Sbjct: 364 TIFRTISKN-EVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQL 422

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L    ++H  I+  K E+N  V  +L++ Y KCG  ++A ++F QL   D+VSW SMI
Sbjct: 423 AALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMI 482

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY  +G+A +A+ LF++M    +R  + TFLAVLSACSH+GLV +G   F  MV +Y I
Sbjct: 483 FAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDI 542

Query: 555 LPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
            P   HYSC++DLLGRAG+L  A  I   +   +    +   LF+AC  H++  +   I 
Sbjct: 543 KPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIG 602

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           K ++E+DPDD + Y+ LSNMYA      +  + R+ MK   + K PGCSWIE+  +I+ F
Sbjct: 603 KMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPF 662

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIE 698
           F+++KS+     VYE L  L   +E
Sbjct: 663 FAEDKSNPLADGVYECLNILGCHME 687



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 258/529 (48%), Gaps = 8/529 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS--MV 172
           +D   ++  L  C+  + L+ G+  H  I       +  ++ SL+  Y  C D  S  +V
Sbjct: 1   MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSL 231
                 P LD++  N LL+ Y  N  F +A   F +L+    V+P+ YTY  +L  CG L
Sbjct: 61  FQTNDCP-LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGL 119

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             +  G+++H   +K   +    V ++L+ MY KC    DA  +F+   QR+V  W A+I
Sbjct: 120 GRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVI 179

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + + + G  E  L+    M+E G +PN  TFTV ++SC  L N   G   H ++I+R + 
Sbjct: 180 SCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRIL 239

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  FV +A+VDMY   G +  AK+  +++ +  ++++WNA I G+     +   IE   +
Sbjct: 240 LDAFVLSALVDMYGKCGCLEMAKEVFEKIPRK-NAITWNAMITGYSLKGDSRSCIELLMR 298

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M          T +SI+ A S    L   + IH  I++++ + ++ +  SLI+ Y KCG 
Sbjct: 299 MNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGY 358

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
              AE +F  ++  +VVSWN MI  +   G   +A+ +++ M    ++P   TF + LSA
Sbjct: 359 VSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSA 418

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS    +  G+++   ++  + +   E     ++D+  + G ++ A      LP +    
Sbjct: 419 CSQLAALDKGRELHYCIIN-HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVS 477

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGL 639
            W  +  A   H     A  +  ++ +L+   D+  ++ + +  + AGL
Sbjct: 478 -WTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGL 525


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 218/654 (33%), Positives = 352/654 (53%), Gaps = 52/654 (7%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  C  E  L  G+  H+L  K+ +    + +   + +Y+KCG +       + +   
Sbjct: 13  HLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDP 72

Query: 182 DIASCNCLLAGYAKNA-------LFDQ------------------------AFSFFLKLD 210
           ++ S N ++A YAK +       LFDQ                        A   F  + 
Sbjct: 73  NVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMR 132

Query: 211 GIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
            + +  + +T S ++ A C  +  I    QLH+  +   + S  +V+NALLT Y K G +
Sbjct: 133 EMGLDMDXFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 270 EDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +DA+ VF G+   R+ +SW ++I  + QH +  K L L   M   G++ + +T    L +
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
              L +   G  FH Q+IK G      VG+ ++D+YS  G      +++ E       V 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 389 WNAQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           WN  ++G+ +N++  E+A+E F QM       ++ ++  ++ ACS L S +  +QIHS  
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 448 VKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +KS   SN + V ++LI  Y+KCG+ +DA R+F ++   + VS NSMI  Y+Q+G   ++
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF+ M+   I PT+ TF++VLSAC+H+G V++G   F  M +++ I PE  HYSCM+D
Sbjct: 430 LHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMID 489

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LLGRAGKL  A   I+ +P  P +  W  L  ACR H ++++A   + Q+L+L+P +AA 
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           YV LSNMYA AG   +    RK M+ + + K+PGCSWIEV  +I+ F +++ SH  + ++
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609

Query: 687 YEKLKQLMQQ--------------IEDIGHTDNEKEDRVLYHSERLAVGFGLIS 726
           YE L+++  +              ++D G    EKE R+ +HSE+LAV FGLIS
Sbjct: 610 YEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLIS 663



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 185/390 (47%), Gaps = 21/390 (5%)

Query: 36  TVEVKEPFASYSACQ--LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN----GYSTRND 89
           +V V   F SY +    L     K   L  +  +F G   I ++ +S N     Y    +
Sbjct: 162 SVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDE-VSWNSMIVAYGQHQE 220

Query: 90  -SFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
            S   G   +     + V  ++L S+L     +E LS          G ++H  + KT  
Sbjct: 221 GSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSG---------GLQFHGQLIKTGF 271

Query: 149 CGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFF 206
             +  V + L+++Y+KC G +     V +++   D+   N +++GY++N  F + A   F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECF 331

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIK 265
            ++ GI  +PN  ++  +++ C +LS+  +GKQ+H+  +K    S + +V NAL+ MY K
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG ++DA  +F+ + + N +S  ++I G+ QHG   + L L   M E  I P   TF   
Sbjct: 392 CGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISV 451

Query: 326 LASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           L++CA       G+  F+    K  +       + ++D+    G++ EA+  +  M  + 
Sbjct: 452 LSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNP 511

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            S+ W + +     +   E A++A +Q+++
Sbjct: 512 GSIGWASLLGACRTHGNIELAVKAANQVLQ 541



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 34/282 (12%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK------ 375
           F   L +C + R+   G   H+  IK  +    +     + +YS  G +  A+K      
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 376 ------------------------QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
                                   QL +       VS+N  I+ +    +T  A+  FS 
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M       D FT S+++ AC     +    Q+HS  V S F+S V V ++L+  Y K G 
Sbjct: 131 MREMGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 472 WEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            +DA+RVF  +    D VSWNSMI AY Q+    KA+ LF++MV  G+     T  +VL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           A +    +  G +    ++K  G        S ++DL  + G
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKT-GFHQNSHVGSGLIDLYSKCG 289


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 211/624 (33%), Positives = 323/624 (51%), Gaps = 15/624 (2%)

Query: 131 ECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           +C  LGR  HA I KT       F+   LVNMY+K     S   ++   P   + +   L
Sbjct: 20  QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTAL 79

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           +AG  +N  F  A   F  +    +QPN +T+       GSL +   GKQ+HA  +K   
Sbjct: 80  IAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ 139

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           +S   V  +   MY K G+ E+A  +F+ + +RN+ +W A ++     G Y+  L     
Sbjct: 140 ISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE 199

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
            R +G +PN  TF   L +CA      +G   H  V++ G      V   ++D Y    +
Sbjct: 200 FRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQ 259

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  ++     + K  + VSW + I  + +N + E+A   F +  +      +F  SS+L 
Sbjct: 260 VGCSEIIFSGISKP-NDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLS 318

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+ L  L   + +H+  VK+    N+ VGS+L++ Y KCGS EDAER F ++   ++V+
Sbjct: 319 ACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVT 378

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIR--PTNSTFLAVLSACSHSGLVQDGQKVFES 547
           WN+MI  Y+  G+A  A+ LF++M     R  P   TF+ VLSACS +G V  G ++FES
Sbjct: 379 WNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFES 438

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           M   YGI P   HY+C+VDLLGRAG +E A  FI  +PI+PT  +W  L  A +     +
Sbjct: 439 MRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           + +  +  + ELDP D+  +V LSNM+A AG   +A   RK MK   I K  GCSWI   
Sbjct: 499 LGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAG 558

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---VLYHSE 716
           N ++ F +++ SH    ++   L +L  ++E  G+         D E+E++   V YHSE
Sbjct: 559 NAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSE 618

Query: 717 RLAVGFGLISLPAKNKFECSRTLE 740
           ++A+ FGLIS+PA      ++ L 
Sbjct: 619 KIALAFGLISIPAGVPIRITKNLR 642



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ C+    L LGR+ H  + ++    D  V   L++ Y KC  +     +   +   + 
Sbjct: 216 LNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPND 275

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   ++  Y +N   ++A   FL+     ++P  +  S++L+ C  LS ++ GK +H  
Sbjct: 276 VSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTL 335

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K   +    V +AL+ MY KCG +EDAE  F+ + +RN+++W A+I G+   G  +  
Sbjct: 336 AVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMA 395

Query: 304 LRLVCLMR--EDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAI 360
           + L   M      + PN  TF   L++C+   + ++G  +F +   + G+  G      +
Sbjct: 396 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACV 455

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           VD+    G + +A + +K+M    +   W A + 
Sbjct: 456 VDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLG 489



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 6/280 (2%)

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEA 373
           + PN  +    + S  S + S +G   HAQ+IK     L  F+   +V+MYS L     +
Sbjct: 4   LSPN--SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRP-NS 60

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            + L  +  + S V+W A IAG  +N +   A+  FS M R+    ++FT+    KA   
Sbjct: 61  AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L S    +Q+H+  VK+   S+V VG S  + Y+K G  E+A ++F ++   ++ +WN+ 
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +      GR   A+  F +   EG  P   TF A L+AC+ +  ++ G+++    V + G
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQL-HGFVLQSG 239

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
              + +  + ++D  G+  ++  + I  S +  KP    W
Sbjct: 240 FEADVSVANGLIDFYGKCHQVGCSEIIFSGIS-KPNDVSW 278



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VLS C+    LE+G+  H L  K  V G+ FV ++LV+MY KCG I+       +MP
Sbjct: 313 VSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 372

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             ++ + N ++ GYA     D A + F  +      V PN+ T+  +L+ C    +++ G
Sbjct: 373 ERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVG 432

Query: 238 KQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGF 294
            ++  ++M+ +Y  +    +   ++ +  + GM+E A    + +  R  +S W A++   
Sbjct: 433 MEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGAS 491

Query: 295 KQHGDYE 301
           K  G  E
Sbjct: 492 KMFGKSE 498


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 204/598 (34%), Positives = 323/598 (54%), Gaps = 22/598 (3%)

Query: 145 KTAVCGDQFVTASLVNMYAKCG----DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
           +  +C D +    L+NM  +C     D      +  Q+   +I   N ++ G   N  FD
Sbjct: 39  RFGLCHDNY----LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFD 94

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
            A  F+  +      PN++T+  +L  C  L  +  G ++H   +K  +     V  +L+
Sbjct: 95  DAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLV 154

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            +Y KCG +EDA  VF+ +  +NV+SWTAII+G+   G + + + +   + E  + P+ +
Sbjct: 155 CLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSF 214

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L++C  L + + G   H  +++ GM    FVGT++VDMY+  G + +A+     M
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                 VSW A I G+  N   +EAI+ F QM R +   D +T   +L AC+ L +L   
Sbjct: 275 -PEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG 333

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           E +   + +++F  N  +G++LI+ Y KCGS   A  VF  +   D V WN++I   + N
Sbjct: 334 EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMN 393

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G  + +  LF ++   GI+P  +TF+ +L  C+H+GLV +G++ F SM + + + P   H
Sbjct: 394 GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEH 453

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y CMVDLLGRAG L+ A   I N+P++  A +W  L  ACR H D ++AE   KQ++EL+
Sbjct: 454 YGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELE 513

Query: 621 PDDAAVYVTLSNMYAEAGLQAD-AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           P ++  YV LSN+Y+ A L+ D A + R  M  K I K PGCSWIEV   ++ F   +K 
Sbjct: 514 PWNSGNYVLLSNIYS-ANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKY 572

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           H    K+Y KL +L ++++  G+            + EKE  +  HSE+LA+ FGLIS
Sbjct: 573 HPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLIS 630



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 210/436 (48%), Gaps = 14/436 (3%)

Query: 112 ESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E  L   F    VL  C+R   L+LG + H L+ K     D FV  SLV +YAKCG ++ 
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V   +P  ++ S   +++GY     F +A   F +L  +++ P+ +T   +L+ C  
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  ++ G+ +H   M++  +    V  +L+ MY KCG ME A SVF+G+ +++++SW A+
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+  +G  ++ + L   M+ + + P+ YT    L++CA L    +G      V +   
Sbjct: 286 IQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEF 345

Query: 351 ALGDFVGTAIVDMYSGLGEI---WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                +GTA++D+Y+  G +   WE  K +KE  +    V WNA I+G   N   + +  
Sbjct: 346 LYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDR----VVWNAIISGLAMNGYVKISFG 401

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK--SKFESNVHVGSSLIEA 465
            F Q+ +     D  T+  +L  C+    +    +  + + +  S   S  H G  +++ 
Sbjct: 402 LFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYG-CMVDL 460

Query: 466 YNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
             + G  ++A ++   +   A+ + W +++ A   +   + A +  ++++   + P NS 
Sbjct: 461 LGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLI--ELEPWNSG 518

Query: 525 FLAVLSACSHSGLVQD 540
              +LS    + L  D
Sbjct: 519 NYVLLSNIYSANLKWD 534


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 217/654 (33%), Positives = 353/654 (53%), Gaps = 29/654 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC LF++   R  ++ + +I +GY+N    G +   Y +   SF  G + D         
Sbjct: 55  ACNLFDEMSHRDTVTWNTMI-SGYVNSGSLGSAWELYKSMK-SF--GLMPDA-------- 102

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+  S+L       V   C     L++G++ H+LI K       +  ++L++MYAKC  
Sbjct: 103 -YTFGSILKG-----VACACR----LDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCER 152

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           ++    V K +P  +  S N L+AG+      D AF     ++   V+ +  T+S +L +
Sbjct: 153 VRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTL 212

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVIS 286
                      QLH + +K        V NA +T Y +CG +EDAE VF+G V  R++++
Sbjct: 213 LDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVT 272

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W +++  F  H   E   +L   M++ G +P+ YT+T  +++C+   N   G   H  VI
Sbjct: 273 WNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVI 329

Query: 347 KRGMALGDFVGTAIVDMY--SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           KRG+     +  A++ MY  S    + +A      M +S   VSWN+ + GF +   +E 
Sbjct: 330 KRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSM-ESKDRVSWNSILTGFSQTGHSEN 388

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ F  M       D + +S++L++CS L +L   +QIH   VKS FESN  V SSLI 
Sbjct: 389 ALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIF 448

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KCG  EDA + F +      ++WNS++ AY+Q+G+   A+ LF +M  + ++  + T
Sbjct: 449 MYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHIT 508

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+A L+ACSH GLV+ G+ + +SM  +YGI P   HY+C VDL GRAG L+ A   I ++
Sbjct: 509 FVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESM 568

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P  P A +W+ L  ACR   D+++A  ++  +LEL+P++   YV LSNMY       +  
Sbjct: 569 PFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKA 628

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              +LM+ +++ K PG SWIEV N+++ F + ++ HS   ++Y+ L+QLM+ I+
Sbjct: 629 CMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIK 682



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 8/317 (2%)

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC--GMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           H QT+KL   +    +N +L+ Y +C  G +  A ++F+ +  R+ ++W  +I+G+   G
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
                  L   M+  G+ P+ YTF   L   A      +G   H+ ++K G     + G+
Sbjct: 82  SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGS 141

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++DMY+    + +A    K + +  +SVSWNA IAGF      + A      M      
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRR-NSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVR 200

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+ T+S +L             Q+H +I+K   + +  V ++ I +Y++CGS EDAERV
Sbjct: 201 LDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERV 260

Query: 479 F-SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           F   + + D+V+WNSM+ A+  + R   A  LF  M   G  P   T+  ++SACSH   
Sbjct: 261 FDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH--- 317

Query: 538 VQDGQKVFESMVKEYGI 554
            +D  K    +V + G+
Sbjct: 318 -KDNGKSLHGLVIKRGL 333


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 205/616 (33%), Positives = 331/616 (53%), Gaps = 23/616 (3%)

Query: 128 SREECLELG--RRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVVKQMPYLDI 183
           S E+C  +   ++ HA + +T +  D F  + +V   A    G +     V  Q+P    
Sbjct: 46  SLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTT 105

Query: 184 ASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            +CN ++ GY    L  QA  F+  + L G+D  P+ +T+ ++   CG L    EGKQLH
Sbjct: 106 FTCNSIIRGYTNKNLPRQAILFYQLMMLQGLD--PDRFTFPSLFKSCGVLC---EGKQLH 160

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             + KL + S   + N L+ MY  CG +  A  VF+ +V ++V+SW  +I  + Q     
Sbjct: 161 CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPH 220

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + ++L   M    + PNE T    L +CA  R+       H  + + G+     + +A++
Sbjct: 221 EAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALM 280

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D+Y   G    A+    +M +  +   WN  I G   +   EEA+  F++M  +    D+
Sbjct: 281 DVYCKCGCYPLARDLFNKMPEK-NLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T +S+L AC+ L +L   + +H  I K K E +V +G++L++ Y KCGS E A RVF +
Sbjct: 340 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DV++W ++I   +  G+  KA+ LF +M +  ++P   TF+ VL+ACSH+GLV +G
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
              F SM  +YGI P   HY CMVD+LGRAG++  A   I N+P+ P   +   L +ACR
Sbjct: 460 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACR 519

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L +AE  ++Q++ELDP +   YV LSN+Y+       A++ R+LM  + I K PGC
Sbjct: 520 IHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGC 579

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           S IEV   ++ F   + SH +  ++YE L  +M++++  G+            + EKE+ 
Sbjct: 580 SAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENE 639

Query: 711 VLYHSERLAVGFGLIS 726
           +  HSE+LA+ FGL+S
Sbjct: 640 LSLHSEKLAIAFGLLS 655



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 137/263 (52%), Gaps = 3/263 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+ C+R   LE  ++ H  I +T +     +T++L+++Y KCG       +  +MP
Sbjct: 241 LVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMP 300

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N ++ G+ +++ +++A S F ++    V+ +  T +++L  C  L A++ GK 
Sbjct: 301 EKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKW 360

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH    K +     A+  AL+ MY KCG +E A  VF+ + +++V++WTA+I G    G 
Sbjct: 361 LHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQ 420

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             K L L   M+   + P+  TF   LA+C  A L N  + Y F++   K G+       
Sbjct: 421 GLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAY-FNSMPNKYGIQPSIEHY 479

Query: 358 TAIVDMYSGLGEIWEAKKQLKEM 380
             +VDM    G I EA+  ++ M
Sbjct: 480 GCMVDMLGRAGRIAEAEDLIQNM 502



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 4/187 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  +  +L  C+    LELG+  H  I K  +  D  +  +LV+MYAKCG I+S + V 
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++MP  D+ +   L+ G A      +A   F ++   +V+P+  T+  +LA C     ++
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG   +  +M  +Y  + ++ +   ++ M  + G + +AE + + + +  +      +++
Sbjct: 458 EGIA-YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLS 516

Query: 293 GFKQHGD 299
             + HG+
Sbjct: 517 ACRIHGN 523


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 213/645 (33%), Positives = 342/645 (53%), Gaps = 20/645 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LDK     VLS C + +   LG+  H L     +    F+T  L++MY KC  I     +
Sbjct: 108 LDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLL 167

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--GSLS 232
            +    LD  S N L+ GYA+   +++     +K+    ++ N +T  + L  C     +
Sbjct: 168 FESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNN 227

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            +  GK LH  T+K        V  ALL MY K G + DA  +F     +NV+ + A+I 
Sbjct: 228 MVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIA 287

Query: 293 GFKQHGDYEK-----PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           GF Q  D +K      L+L   M+  GI P+++TF+  +  C  +     G   HA + K
Sbjct: 288 GFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICK 347

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +   +F+G+ ++++YS LG   +  K      K    VSW   IAG+ +N + E A+ 
Sbjct: 348 HNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPK-LDIVSWTTMIAGYAQNGQFESALA 406

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +++ +    DEF  +++L AC+ + +  + EQ+H   VK+   +   V +S I  Y 
Sbjct: 407 LFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYA 466

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           K G+ + A+  F ++   DVVSW+ MI + +Q+G A+ AI LFE M   GI P   TFL 
Sbjct: 467 KSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLG 526

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL+ACSH GLV++G + +ESM K+Y +     H +C+VDLL RAG+L  A  FI N    
Sbjct: 527 VLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFG 586

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +WR L + CR + D+   + ++++++ELDP +++ YV L N+Y +AG+   A + R
Sbjct: 587 DHPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIR 646

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           +LMK + I KEPG SWIEV N+++ F   + SH     +Y+KL+ ++++   IG+ D + 
Sbjct: 647 ELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKI 706

Query: 708 EDRVL------------YHSERLAVGFGLISLPAKNKFECSRTLE 740
           ++  +            +HSE+LAV FG++SLP     +  + L 
Sbjct: 707 QNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLR 751



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 253/502 (50%), Gaps = 10/502 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD     +++ + S+      G+  HA + KTA     F+  + +N+Y+K G++ +   +
Sbjct: 7   LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M    + S N L++GY     + +A   F +     ++ + ++Y+ +L+ CG +   
Sbjct: 67  FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK +H   +      +  ++N L+ MY KC  ++ A  +FE   + + +SW ++I G+
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMAL 352
            + G YE+ L+L+  M   G+  N +T   AL SC    N+ + Y    H   +K+G+ L
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDL 246

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE-----EAIE 407
              VGTA++DMY+  G + +A  QL     + + V +NA IAGF + +  +     EA++
Sbjct: 247 DIVVGTALLDMYAKTGYLGDA-IQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALK 305

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            FSQM R      +FT+SSI+K C+ + +    +QIH+ I K   +S+  +GS+LIE Y+
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYS 365

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
             GS ED  + F+     D+VSW +MI  Y+QNG+   A+ LF +++  G +P       
Sbjct: 366 LLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITT 425

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +LSAC+     + G++V    VK  GI       +  + +  ++G L+ A I    +   
Sbjct: 426 MLSACADVAAERSGEQVHGYAVKT-GIGTLAIVQNSQISMYAKSGNLDSAKITFEEIK-N 483

Query: 588 PTAPIWRPLFAACRCHSDLKMA 609
           P    W  +  +   H   K A
Sbjct: 484 PDVVSWSVMICSNAQHGHAKDA 505


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 209/621 (33%), Positives = 337/621 (54%), Gaps = 13/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C     L  G R H  + K+ +  D ++  SL+ MYAK G I+S   V ++MP  D
Sbjct: 132 VIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRD 191

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++GY       ++ S F ++    ++ + ++   +L  C     +  GK++H 
Sbjct: 192 LVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHC 251

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q M+ +      V  +L+ MY KCG M+ AE +F+ +  +++++W A+I G+  +    +
Sbjct: 252 QMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFE 311

Query: 303 PLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
               V  M+E G + P+  T    L  CA L    +G   H   I+ G      + TA+V
Sbjct: 312 SFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALV 371

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY   G++  A+    +M +  + +SWNA IA + +N +  +A+  F  +       D 
Sbjct: 372 DMYGECGKLKPAECLFGQMNER-NLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDA 430

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T +SIL A + L SL   EQIH  + K K +SN  V +S++  Y KCG+   A  +F +
Sbjct: 431 TTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDR 490

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +T  DV+SWN++I AY+ +G  R +I LF +M  +G  P  STF+++L +CS +GLV +G
Sbjct: 491 MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEG 550

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F SM ++Y I P   HY C++DL+GR G L+ A  FI  +P+ PTA IW  L  A R
Sbjct: 551 WEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASR 610

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              D+++AE  ++ IL L+ D+   YV LSNMYAEAG   D E  +  MK + + K  GC
Sbjct: 611 NKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGC 670

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDI----------GHTDNEKEDR 710
           S +++ +K +RF +Q++S +E+  VY+ L  + ++I ED+             + ++ + 
Sbjct: 671 SVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVHSLTKFRPSDLEKKRANS 730

Query: 711 VLYHSERLAVGFGLISLPAKN 731
              HS RLA+ FGLIS    N
Sbjct: 731 AKSHSLRLAICFGLISTTIGN 751



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 266/536 (49%), Gaps = 24/536 (4%)

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y + G +K+ + + + M   D    N ++ G+  N LF  A  F+ +++   V+ +++TY
Sbjct: 70  YVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTY 129

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
             ++  CG L  + EG+++H + +K        + N+L+ MY K G +E AE VF  +  
Sbjct: 130 PFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPV 189

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA---SLRNSHMG 338
           R+++SW ++I+G+   GD  + L     M+  GI  + ++    L +C+    LRN   G
Sbjct: 190 RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRN---G 246

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H Q+++  + L   V T++VDMY+  G +  A++   ++    S V+WNA I G+  
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQI-TDKSIVAWNAMIGGYSL 305

Query: 399 NQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           N ++ E+     +M        D  T  ++L  C+ L ++   + +H   +++ F  ++ 
Sbjct: 306 NAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLV 365

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + ++L++ Y +CG  + AE +F Q+   +++SWN+MI +Y++NG  RKA+ LF+ +  + 
Sbjct: 366 LETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKT 425

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++P  +T  ++L A +    +++ +++    V +  +       + +V + G+ G L  A
Sbjct: 426 LKPDATTIASILPAYAELASLREAEQI-HGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRA 484

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA 635
                 +  K     W  +  A   H   +++  +  ++ E   +P + + +V+L    +
Sbjct: 485 REIFDRMTFKDVIS-WNTVIMAYAIHGFGRISIELFSEMREKGFEP-NGSTFVSLLLSCS 542

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ--NKSHS-----EMP 684
            AGL  +  E    MK ++ +  PG   IE Y  I     +  N  H+     EMP
Sbjct: 543 VAGLVNEGWEYFNSMK-RDYNINPG---IEHYGCILDLIGRTGNLDHAKNFIEEMP 594



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 206/444 (46%), Gaps = 13/444 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+  VI +L  CS E  L  G+  H  + ++ +  D  V  SLV+MYAKCG +     +
Sbjct: 225 LDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERL 284

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSA 233
             Q+    I + N ++ GY+ NA   ++F++  K+ +G  + P+  T   +L  C  L A
Sbjct: 285 FDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEA 344

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I  GK +H   ++  +L    +  AL+ MY +CG ++ AE +F  + +RN+ISW A+I  
Sbjct: 345 ILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIAS 404

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + ++G+  K + L   +    + P+  T    L + A L +       H  V K  +   
Sbjct: 405 YTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSN 464

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  +IV MY   G +  A++    M      +SWN  I  +  +     +IE FS+M 
Sbjct: 465 TFVSNSIVFMYGKCGNLLRAREIFDRM-TFKDVISWNTVIMAYAIHGFGRISIELFSEMR 523

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG----SSLIEAYNKC 469
                 +  T+ S+L +CS+   +    +  + +   K + N++ G      +++   + 
Sbjct: 524 EKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSM---KRDYNINPGIEHYGCILDLIGRT 580

Query: 470 GSWEDAERVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           G+ + A+    ++  A     W S++ A    G    A I  E ++   +   N+    +
Sbjct: 581 GNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHIL--SLEHDNTGCYVL 638

Query: 529 LSAC-SHSGLVQDGQKVFESMVKE 551
           LS   + +G  +D +++   M KE
Sbjct: 639 LSNMYAEAGRWEDVERIKFHMKKE 662


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 195/626 (31%), Positives = 345/626 (55%), Gaps = 17/626 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHA--LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           +I++L   +  + L++G+  H+  ++T  A         SL+N YAK   +     +  +
Sbjct: 32  LIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDR 91

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAID 235
           MP  ++ S + L+ GY  N    +       +  +G +V PN Y  +  ++ C     ++
Sbjct: 92  MPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEG-NVSPNEYILAIAISSCCDRGRVE 150

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG+Q H   +K  +     V NAL++MY KC +++DA  V+  +   +++++ +I++   
Sbjct: 151 EGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLV 210

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++G   + L ++  M  + +  ++ TF  A + CASL++  +G   H +++   +    +
Sbjct: 211 ENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAY 270

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V +AI++MY   G+   A+     + +S + V W A +A  F+N   EEA+  FS+M + 
Sbjct: 271 VSSAIINMYGKCGKSLMARGVFDGL-QSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQE 329

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   +EFTY+ +L AC+ L +      +H    KS F+ +V VG++LI  Y K G  E A
Sbjct: 330 NVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAA 389

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ++VFS +   D+++WN+MI  +S +G  +KA+++F+ M+     P   TF  VLSAC H 
Sbjct: 390 KKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHL 449

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLVQ+G      ++K++G+ P   HY+C+V LL + G+L  A  F+   P+K     WR 
Sbjct: 450 GLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRT 509

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC  H +  +  ++++ +LE+DP+D   Y  LSN+YA+        + RKLM+ K+I
Sbjct: 510 LLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKI 569

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            KEPG SWIE+ N  + F S++  H +  + Y+K+K+L+  I+ +G+T           D
Sbjct: 570 KKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVED 629

Query: 705 NEKEDRVLYHSERLAVGFGLISLPAK 730
            +KE  + YHSE+LA+ +GL+ LP++
Sbjct: 630 EQKEYYLSYHSEKLAIAYGLLKLPSE 655



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 5/277 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA-- 173
           DK   +   S C+  + L LG   H  +  + V  D +V+++++NMY KCG  KS++A  
Sbjct: 233 DKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSAIINMYGKCG--KSLMARG 290

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   +   ++     ++A   +N  F++A + F K++  +V+ N +TY+ +L  C  LSA
Sbjct: 291 VFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSA 350

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G  LH  + K  +     V NAL+ MY K G +E A+ VF  ++ R++I+W A+I G
Sbjct: 351 RRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICG 410

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMAL 352
           F  HG  +K L +   M      PN  TFT  L++C  L     G+ +   ++K+ G+  
Sbjct: 411 FSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQP 470

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           G    T IV + S  G++ EA+  ++        V+W
Sbjct: 471 GLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAW 507


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 204/664 (30%), Positives = 353/664 (53%), Gaps = 47/664 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS CS  + L+ G+  H    K  +  + FV+ +LVN+Y  C  ++   AV   MP+ +
Sbjct: 248 ILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRN 307

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N L + Y       +  + F ++    V+P+    S++L  C  L  +  GK +H 
Sbjct: 308 VITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHG 367

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K   +    V  AL+ +Y  C  + +A++VF+ +  RNV++W ++ + +   G  +K
Sbjct: 368 FAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQK 427

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   M  +G+ P+  T    L +C+ L++   G + H   ++ GM    FV  A++ 
Sbjct: 428 GLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLS 487

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+    + EA+    ++       SWN  +  +F N++ E+ +  FSQM R++   DE 
Sbjct: 488 LYAKCVCVREAQVVF-DLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEI 546

Query: 423 TYS-----------------------------------SILKACSLLPSLATCEQIHSRI 447
           T+S                                   SIL+ACSL   L   ++IH  +
Sbjct: 547 TWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYV 606

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
            +   + ++   ++L++ Y KCG    +  VF  +   DV SWN+MI A   +G  ++A+
Sbjct: 607 FRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEAL 666

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LFEKM++  ++P ++TF  VLSACSHS LV++G ++F SM +++ + PE  HY+C+VD+
Sbjct: 667 SLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDI 726

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
             RAG LE A  FI  +P++PTA  W+   A CR + ++++A+  +K++ E+DP+ +A Y
Sbjct: 727 YSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANY 786

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           VTL N+   A L ++A + RKLMK + I+K PGCSW  V N+++ F + +KS+ E  K+Y
Sbjct: 787 VTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIY 846

Query: 688 EKLKQLMQQIEDIGH---TD--------NEKEDRVLYHSERLAVGFGLISLPAKNKFECS 736
             L +L  +I+  G+   TD         EK + +  HSE+LAV FG+++L  ++     
Sbjct: 847 NFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVF 906

Query: 737 RTLE 740
           + L 
Sbjct: 907 KNLR 910



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 259/564 (45%), Gaps = 48/564 (8%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +L  CS  + L+ G+  H  + +  +  D FV+++ VN YAKC  ++    V   MP
Sbjct: 144 VSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP 203

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           + D+ + N L + Y       +  + F  + LDG  V+P+  T S +L+ C  L  +  G
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDG--VKPDPVTVSCILSACSDLQDLKSG 261

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K +H   +K   +    VSNAL+ +Y  C  + +A++VF+ +  RNVI+W ++ + +   
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  +K L +   M  +G+ P+    +  L +C+ L++   G   H   +K GM    FV 
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           TA+V++Y+    + EA+     M    + V+WN+  + +      ++ +  F +MV N  
Sbjct: 382 TALVNLYANCLCVREAQTVFDLM-PHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGV 440

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  SIL ACS L  L + + IH   V+     +V V ++L+  Y KC    +A+ 
Sbjct: 441 KPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQV 500

Query: 478 VFSQLTAADVVSWNSMIKAY-----------------------------------SQNGR 502
           VF  +   +V SWN ++ AY                                    +N R
Sbjct: 501 VFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSR 560

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             +A+ +F KM   G +P  +T  ++L ACS S  ++ G+++   + + +    + A  +
Sbjct: 561 IEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDW-DLARTN 619

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILEL-D 620
            +VD+  + G L ++      +PIK     W  +  A   H + K A     K +L +  
Sbjct: 620 ALVDMYAKCGGLSLSRNVFDMMPIKDVFS-WNTMIFANGMHGNGKEALSLFEKMLLSMVK 678

Query: 621 PDDAAVYVTLS----NMYAEAGLQ 640
           PD A     LS    +M  E G+Q
Sbjct: 679 PDSATFTCVLSACSHSMLVEEGVQ 702



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 246/539 (45%), Gaps = 5/539 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + V   C+        +++H   T+  V  D  +  + ++ Y KC  ++    V 
Sbjct: 39  DKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVF 98

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ + N L A Y       Q  + F K+    V+ N  T S++L  C  L  + 
Sbjct: 99  DDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLK 158

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK++H   ++   +    VS+A +  Y KC  + +A++VF+ +  R+V++W ++ + + 
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV 218

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
             G  +K L +   M  DG+ P+  T +  L++C+ L++   G   H   +K GM    F
Sbjct: 219 NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  A+V++Y     + EA+     M    + ++WN+  + +      ++ +  F +M  N
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLM-PHRNVITWNSLASCYVNCGFPQKGLNVFREMGLN 337

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D    SSIL ACS L  L + + IH   VK     +V V ++L+  Y  C    +A
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + VF  +   +VV+WNS+   Y   G  +K + +F +MV+ G++P   T L++L ACS  
Sbjct: 398 QTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDL 457

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             ++ G KV       +G++ +    + ++ L  +   +  A +    +P +  A  W  
Sbjct: 458 QDLKSG-KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVAS-WNG 515

Query: 596 LFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           +  A   + + +   ++  Q+   E+  D+    V +      + ++   E  RK+  M
Sbjct: 516 ILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTM 574



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 174/372 (46%), Gaps = 2/372 (0%)

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           + L ++A   +       ++P+   +  +   C +     + KQ H    +   +S  ++
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NA +  Y KC  +E A  VF+ LV R+V++W ++   +   G  ++ L +   M  + +
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             N  T +  L  C+ L++   G   H  V++ GM    FV +A V+ Y+    + EA+ 
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M      V+WN+  + +      ++ +  F +MV +    D  T S IL ACS L 
Sbjct: 198 VFDLM-PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L + + IH   +K     NV V ++L+  Y  C    +A+ VF  +   +V++WNS+  
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y   G  +K + +F +M + G++P      ++L ACS    ++ G+ +    VK +G++
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK-HGMV 375

Query: 556 PEEAHYSCMVDL 567
            +    + +V+L
Sbjct: 376 EDVFVCTALVNL 387



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 14/210 (6%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +L  CS  ECL +G+  H  + +     D   T +LV+MYAKCG +     V 
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVF 638

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  D+ S N ++     +    +A S F K+    V+P+  T++ +L+ C     ++
Sbjct: 639 DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVE 698

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-----NVISWT 288
           EG Q+   +M   +L +    +   ++ +Y + G +E+A     G +QR       I+W 
Sbjct: 699 EGVQIF-NSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA----YGFIQRMPMEPTAIAWK 753

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           A + G + + + E  L  +   +   IDPN
Sbjct: 754 AFLAGCRVYKNVE--LAKISAKKLFEIDPN 781


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 206/666 (30%), Positives = 342/666 (51%), Gaps = 76/666 (11%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + F   SL++MYAK G +     V  QMP  D  S   ++ G  +   F  A   FL + 
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMV 155

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G  + P+ +  + +L+ C +  A   G+++H+  +KL   S   V+N++L MY KCG  E
Sbjct: 156 GEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAE 215

Query: 271 DAESVFE-------------------------------GLVQRNVISWTAIINGFKQHGD 299
            A +VFE                                + +R+++SW AII G+ Q+G 
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275

Query: 300 YEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            +  L+    ++    ++P+E+T T  L++CA+LR   MG   H+ +++ GM     +  
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 359 AIVDMYSGLGEIWEAK-----------------------------KQLKEMGKSASS--- 386
           A++  Y+  G +  A+                             KQ +E+    ++   
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           ++W A I G+ +N + +EA+E F  M+R+    +  T +++L AC+ L  L   +QIH R
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARK 505
            ++S  E +V V +++I  Y + GS   A RVF Q+    + V+W SMI A +Q+G   +
Sbjct: 456 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQ 515

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           AI+LFE+M+  G++P   T++ V SAC+H+G +  G++ +E M+ E+GI+PE +HY+CMV
Sbjct: 516 AIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMV 575

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLL RAG L  A  FI  +P+ P   +W  L AACR   +  +AE  ++++L +DPD++ 
Sbjct: 576 DLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSG 635

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            Y  L+N+Y+  G   DA    KL K K + KE G SW  V +K++ F + +  H +   
Sbjct: 636 AYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDA 695

Query: 686 VYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFE 734
           + +K  ++ ++I+  G             D  KE+ +  HSE+LA+ FGLIS P K    
Sbjct: 696 ICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 755

Query: 735 CSRTLE 740
             + L 
Sbjct: 756 IMKNLR 761



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 223/504 (44%), Gaps = 71/504 (14%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E L   QF++  VLS C+  E   +GR+ H+ + K  +     V  S++ MY KCGD ++
Sbjct: 157 EGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAET 216

Query: 171 MVAVVKQMPY------------------LDIA-------------SCNCLLAGYAKNALF 199
             AV ++M                    +D+A             S N ++AGY +N L 
Sbjct: 217 ARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLD 276

Query: 200 DQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           D A  FF + L    ++P+ +T +++L+ C +L  +  GKQ+H+  ++      + + NA
Sbjct: 277 DMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNA 336

Query: 259 LLTMYIKCGMME---------------------------------DAESVFEGLVQRNVI 285
           L++ Y K G +E                                  A  VF+ +  R+VI
Sbjct: 337 LISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI 396

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           +WTA+I G++Q+G  ++ + L   M   G +PN +T    L++CASL     G   H + 
Sbjct: 397 AWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRA 456

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+        V  AI+ +Y+  G +  A++   ++     +V+W + I    ++   E+A
Sbjct: 457 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQA 516

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIE 464
           I  F +M+R     D  TY  +  AC+    +   ++ + +++        +   + +++
Sbjct: 517 IVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVD 576

Query: 465 AYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
              + G   +A     ++  A D V W S++ A      A  A +  EK++   I P NS
Sbjct: 577 LLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLL--SIDPDNS 634

Query: 524 -TFLAVLSACSHSGLVQDGQKVFE 546
             + A+ +  S  G   D  ++++
Sbjct: 635 GAYSALANVYSACGRWNDAARIWK 658



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 113/261 (43%), Gaps = 40/261 (15%)

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS----GLGEIWEAKKQLKEMGKSA-SSVS 388
           N   G   HA  +K G+ +  ++   ++  Y+    G G   EA++   ++  +  ++ +
Sbjct: 40  NPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFT 99

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDA------------------------------- 417
           WN+ ++ + ++ +  +A   F+QM   DA                               
Sbjct: 100 WNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
           A  +F  +++L +C+   +     ++HS ++K    S V V +S++  Y KCG  E A  
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++      SWN+M+  Y+  GR   A+ +FE M    I   N    A+++  + +GL
Sbjct: 220 VFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWN----AIIAGYNQNGL 275

Query: 538 VQDGQKVFESMVKEYGILPEE 558
                K F  M+    + P+E
Sbjct: 276 DDMALKFFSRMLTASSMEPDE 296


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 202/626 (32%), Positives = 351/626 (56%), Gaps = 25/626 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPY 180
           V+  CS  + + +GR     + KT     D  V  SL++M+ K     ++   V  +M  
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           L++ +   ++    +     +A  FFL +     + + +T S++ + C  L  +  GKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H+  ++   +     S  L+ MY KC   G ++D   VF+ +   +V+SWTA+I G+ ++
Sbjct: 292 HSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 298 GDY-EKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +   + + L   M   G ++PN +TF+ A  +C +L +  +G     Q  KRG+A    
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  +++ M+     + +A++  + + +  + VS+N  + G  RN   E+A +  S++   
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +     FT++S+L   + + S+   EQIHS++VK     N  V ++LI  Y+KCGS + A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF+ +   +V+SW SMI  ++++G A + +  F +M+ EG++P   T++A+LSACSH 
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G + F SM +++ I P+  HY+CMVDLL RAG L  A  FI+ +P +    +WR 
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
              ACR HS+ ++ +  +++ILELDP++ A Y+ LSN+YA AG   ++ E R+ MK + +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-------- 707
            KE GCSWIEV +KI++F+  + +H    ++Y++L +L+ +I+  G+  +          
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEE 768

Query: 708 ------EDRVLY-HSERLAVGFGLIS 726
                 ++R+LY HSE++AV FGLIS
Sbjct: 769 ENDEAEKERLLYQHSEKIAVAFGLIS 794



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 225/465 (48%), Gaps = 14/465 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD---IKSMVAVVKQMP 179
           +L  C R     LG+  HA + +  +  D  +  SL+++Y+K GD    + +   +++  
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S + ++A Y  N     A   F++   + + PN Y Y+ ++  C +   +  G+ 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 240 LHAQTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                MK  +  S   V  +L+ M++K     E+A  VF+ + + NV++WT +I    Q 
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + +R    M   G + +++T +   ++CA L N  +G   H+  I+ G+   D V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVE 305

Query: 358 TAIVDMY---SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-QKTEEAIEAFSQMV 413
            ++VDMY   S  G + + +K    M +  S +SW A I G+ +N     EAI  FS+M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 414 -RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            +     + FT+SS  KAC  L      +Q+  +  K    SN  V +S+I  + K    
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA+R F  L+  ++VS+N+ +    +N    +A  L  ++    +  +  TF ++LS  
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++ G ++ G+++   +VK  G+   +   + ++ +  + G ++ A
Sbjct: 485 ANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTA 528



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 193/379 (50%), Gaps = 17/379 (4%)

Query: 210 DGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           DGI  +P +  T+S++L  C        GK +HA+ ++      + + N+L+++Y K G 
Sbjct: 55  DGI--RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGD 112

Query: 269 MEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
              AE VFE + +   R+V+SW+A++  +  +G     +++     E G+ PN+Y +T  
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKS 383
           + +C++     +G +    ++K G    D  VG +++DM+  G      A K   +M + 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE- 231

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            + V+W   I    +     EAI  F  MV +    D+FT SS+  AC+ L +L+  +Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           HS  ++S    +V    SL++ Y KC   GS +D  +VF ++    V+SW ++I  Y +N
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 501 -GRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
              A +AI LF +M+ +G + P + TF +   AC +    + G++V     K  G+    
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNS 408

Query: 559 AHYSCMVDLLGRAGKLEIA 577
           +  + ++ +  ++ ++E A
Sbjct: 409 SVANSVISMFVKSDRMEDA 427



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 405 AIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           A+ A   M R+     D  T+SS+LK+C         + +H+R+++   E +  + +SLI
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 464 EAYNKCGSWEDAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             Y+K G    AE VF    +    DVVSW++M+  Y  NGR   AI +F + +  G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +  + AV+ ACS+S  V  G+     ++K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 205/637 (32%), Positives = 335/637 (52%), Gaps = 13/637 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ V+  C+    + +G   H L  K  +  +  V  SLV+MY+KCG +    A+ 
Sbjct: 298 DVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALF 357

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAI 234
                 ++ S N ++ GY+K   F   F    ++   + V+ N  T   +L  C     +
Sbjct: 358 DMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQL 417

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              K++H    +  +L    V+NA +  Y KC  ++ AE VF G+  + V SW A+I   
Sbjct: 418 LSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAH 477

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+G   K L L  +M + G+DP+ +T    L +CA L+    G   H  +++ G+ L +
Sbjct: 478 AQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDE 537

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F+G +++ +Y     +   K    +M ++ S V WN  I GF +N+   EA++ F QM+ 
Sbjct: 538 FIGISLMSLYIQCSSMLLGKLIFDKM-ENKSLVCWNVMITGFSQNELPCEALDTFRQMLS 596

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                 E   + +L ACS + +L   +++HS  +K+    +  V  +LI+ Y KCG  E 
Sbjct: 597 GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQ 656

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           ++ +F ++   D   WN +I  Y  +G   KAI LFE M  +G RP + TFL VL AC+H
Sbjct: 657 SQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNH 716

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV +G K    M   YG+ P+  HY+C+VD+LGRAG+L  AL  ++ +P +P + IW 
Sbjct: 717 AGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWS 776

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L ++CR + DL++ E +SK++LEL+P+ A  YV LSN+YA  G   +  + R+ MK   
Sbjct: 777 SLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENG 836

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--------E 706
           + K+ GCSWIE+   +YRF   + S SE  K+ +   +L ++I  IG+  +        E
Sbjct: 837 LHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELE 896

Query: 707 KEDRVLY---HSERLAVGFGLISLPAKNKFECSRTLE 740
           +E ++     HSE+LA+ FGL++          + L 
Sbjct: 897 EEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLR 933



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 269/564 (47%), Gaps = 41/564 (7%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVA 173
           + K+ +  +L  C   + + +GR+ HAL++ +  +  D  ++  ++ MY+ CG       
Sbjct: 90  ISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG 149

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLS 232
           V       D+   N LL+GY++NALF  A S FL+L    D+ P+++T   +   C  ++
Sbjct: 150 VFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            ++ G+ +HA  +K    S   V NAL+ MY KCG +E A  VFE +  RN++SW +++ 
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMY 269

Query: 293 GFKQHGDYEK---PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
              ++G + +     + + +  E+G+ P+  T    + +CA++    MG + H    K G
Sbjct: 270 ACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLG 329

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     V  ++VDMYS  G + EA + L +M    + VSWN  I G+ +        E  
Sbjct: 330 ITEEVTVNNSLVDMYSKCGYLGEA-RALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELL 388

Query: 410 SQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
            +M R +    +E T  ++L ACS    L + ++IH    +  F  +  V ++ + AY K
Sbjct: 389 QEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAK 448

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           C S + AERVF  +    V SWN++I A++QNG   K++ LF  M+  G+ P   T  ++
Sbjct: 449 CSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSL 508

Query: 529 LSACSHSGLVQDGQKVFESMVKE-------YGILPEEAHYSCMVDLLGRA--GKLEIALI 579
           L AC+    ++ G+++   M++         GI     +  C   LLG+    K+E   +
Sbjct: 509 LLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSL 568

Query: 580 FISN----------LP--------------IKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
              N          LP              IKP       +  AC   S L++ + +   
Sbjct: 569 VCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSF 628

Query: 616 ILELD-PDDAAVYVTLSNMYAEAG 638
            L+    +DA V   L +MYA+ G
Sbjct: 629 ALKAHLSEDAFVTCALIDMYAKCG 652



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 7/264 (2%)

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAK 374
           D ++    + L +C   +N H+G   HA V        D V  T I+ MYS  G   +++
Sbjct: 89  DISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSR 148

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSL 433
               +  K      +NA ++G+ RN    +AI  F +++   D A D FT   + KAC+ 
Sbjct: 149 GVF-DAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAG 207

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +  +   E +H+  +K+   S+  VG++LI  Y KCG  E A +VF  +   ++VSWNS+
Sbjct: 208 VADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSV 267

Query: 494 IKAYSQNGRARKAIILFEKMVV---EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           + A S+NG   +   +F+++++   EG+ P  +T + V+ AC+  G V+ G  V   +  
Sbjct: 268 MYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGM-VVHGLAF 326

Query: 551 EYGILPEEAHYSCMVDLLGRAGKL 574
           + GI  E    + +VD+  + G L
Sbjct: 327 KLGITEEVTVNNSLVDMYSKCGYL 350


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 197/589 (33%), Positives = 336/589 (57%), Gaps = 15/589 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  ++  L+ MY KCG +     V  +M   ++ S   L+ G+ +N    ++   F K+ 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V+PN +T+ST L  CG L+ +D G+Q+H   +K  +     V N+++ MY KCG + 
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A  +FE +  RN+ISW A+I G+   G  EK L L   M+E G   +E+TFT  L +C+
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185

Query: 331 SLRNSHMGYMFHAQVIKRGM--ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            L     G   HA +I  G   ++   V  A++D+Y   G+++ A++    + +    +S
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI-EEKHVIS 244

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W A I G+ +     E++E F Q+  +    D F  SS++   +    +   +Q+H+  +
Sbjct: 245 WTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI 304

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K     ++ V +S+++ Y KCG   +AER+FS++ A +V+SW  MI  Y ++G  ++AI 
Sbjct: 305 KVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIR 364

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF++M ++   P + T+LAVL  CSHSGLV+ GQ+ F  +   +GI     HY+CMVDLL
Sbjct: 365 LFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLL 424

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG+L+ A   + ++P++    IW+ L +ACR H DL++ + +   +L LD ++   YV
Sbjct: 425 GRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYV 484

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            +SN+YA+AG   + E  R+L+K K++ KE G SW+E+  +++ F+  + +H    K++E
Sbjct: 485 MMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHE 544

Query: 689 KLKQLMQQI-EDIGHT--------DNEKE---DRVLYHSERLAVGFGLI 725
            LK++ +++ E++G+         D E+E   D +  HSE+LA+G  L+
Sbjct: 545 ILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALV 593



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 5/382 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C     L++GR+ H +  KT       V  S+++MY+KCG I     + + MP  ++
Sbjct: 80  LKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNL 139

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA- 242
            S N ++AGY      ++A   F K+  +    + +T+++ L  C  L AI EG Q+HA 
Sbjct: 140 ISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAF 199

Query: 243 -QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             T    Y   TAV+ AL+ +Y+KCG +  A  VF  + +++VISWTA+I G+ Q G+  
Sbjct: 200 LITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLA 259

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + + L   +RE  I  + +  +  +   A       G   HA  IK    +   V  +I+
Sbjct: 260 ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSIL 319

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY   G I EA++   EM  + + +SW   I G+ ++   +EAI  F +M  +    D+
Sbjct: 320 DMYLKCGMINEAERLFSEM-PARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDD 378

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            TY ++L  CS    +   ++  SR+      ++ V   + +++   + G  ++A+ +  
Sbjct: 379 VTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVD 438

Query: 481 QL-TAADVVSWNSMIKAYSQNG 501
            +   A+V  W +++ A   +G
Sbjct: 439 SMPLEANVGIWQTLLSACRVHG 460



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F  ++ + + LI  Y KCG    A  VF ++   +VVSW +++  + QNG   ++++LF 
Sbjct: 3   FGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFS 62

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           KM + G++P + TF   L AC     +  G+++ +  VK  G        + ++D+  + 
Sbjct: 63  KMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKT-GFDMVNVVGNSIIDMYSKC 121

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G++  A      +P++     W  + A 
Sbjct: 122 GRINEAACMFEVMPVRNLIS-WNAMIAG 148


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 319/612 (52%), Gaps = 13/612 (2%)

Query: 137  RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
            +R H  + K     +  V  SL+  Y K G ++S   +  ++   D+ S N ++ G   N
Sbjct: 490  KRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVN 549

Query: 197  ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                     F+++  + V+ +  T  ++L    ++  +  G+ LH   +K  +  +   S
Sbjct: 550  GFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFS 609

Query: 257  NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            N LL MY KCG +  A  VF  +    ++SWT+ I  + + G Y   + L   M+  G+ 
Sbjct: 610  NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669

Query: 317  PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            P+ YT T  + +CA   +   G   H+ VIK GM     V  A+++MY+  G + EA+  
Sbjct: 670  PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729

Query: 377  LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              ++      VSWN  I G+ +N    EA+E F  M +     D+ T + +L AC+ L +
Sbjct: 730  FSKI-PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKP-DDITMACVLPACAGLAA 787

Query: 437  LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
            L    +IH  I++  + S++HV  +L++ Y KCG    A+ +F  +   D++SW  MI  
Sbjct: 788  LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847

Query: 497  YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            Y  +G   +AI  F +M + GI P  S+F  +L+ACSHSGL+ +G K F SM  E G+ P
Sbjct: 848  YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEP 907

Query: 557  EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
            +  HY+C+VDLL R G L  A  FI ++PIKP   IW  L + CR H D+K+AE +++ I
Sbjct: 908  KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI 967

Query: 617  LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
             EL+PD+   YV L+N+YAEA    + ++ RK M+ +   + PGCSWIEV  K   F + 
Sbjct: 968  FELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 1027

Query: 677  NKSHSEMPKVYEKLKQLMQQIED-----------IGHTDNEKEDRVLYHSERLAVGFGLI 725
            N  H +  ++   L++L  Q+++           I   D EKE     HSE+ A+ FG++
Sbjct: 1028 NSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGIL 1087

Query: 726  SLPAKNKFECSR 737
            +LP       S+
Sbjct: 1088 NLPPGRTVRVSK 1099



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 267/520 (51%), Gaps = 9/520 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+ ++ LE G+R H++I    +  D+ + A LV MY  CGD+     +  ++    
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N L++ YAK   F ++ S F K+  + V  N YT++ +L    +L  + E K++H 
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL + S TAV N+L+  Y K G +E A ++F+ L + +V+SW ++ING   +G    
Sbjct: 495 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   M   G++ +  T    L + A++ N  +G   H   +K   +        ++D
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLD 614

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G +  A +   +MG + + VSW + IA + R     +AI  F +M       D +
Sbjct: 615 MYSKCGNLNGATEVFVKMGDT-TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +SI+ AC+   SL     +HS ++K+   SN+ V ++LI  Y KCGS E+A  VFS++
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+VSWN+MI  YSQN    +A+ LF  M  +  +P + T   VL AC+    +  G+
Sbjct: 734 PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGR 792

Query: 543 KVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           ++   +++  G    + H +C +VD+  + G L +A +    +P K     W  + A   
Sbjct: 793 EIHGHILRR-GYF-SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLIS-WTVMIAGYG 849

Query: 602 CH--SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            H   +  ++ F   +I  ++PD+++  V L N  + +GL
Sbjct: 850 MHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NACSHSGL 888



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 213/476 (44%), Gaps = 44/476 (9%)

Query: 88  NDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA 147
           N    +GF  +G    + +    +E  +D   ++ VL   +    L LGR  H    K  
Sbjct: 544 NGCVVNGFSGNGLEIFIQMLILGVE--VDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601

Query: 148 VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL 207
              +   + +L++MY+KCG++     V  +M    I S    +A Y +  L+  A   F 
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           ++    V+P+ YT ++++  C   S++D+G+ +H+  +K    S   V+NAL+ MY KCG
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            +E+A  VF  +  ++++SW  +I G+ Q+    + L L   M++    P++ T    L 
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLP 780

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +CA L     G   H  +++RG      V  A+VDMY+  G +  A + L +M      +
Sbjct: 781 ACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLI 839

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SW   IAG+  +    EAI  F++M       DE ++S IL ACS           HS +
Sbjct: 840 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS-----------HSGL 888

Query: 448 VKS--KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           +    KF +++          N+CG     E             +  ++   ++ G   K
Sbjct: 889 LNEGWKFFNSMR---------NECGVEPKLEH------------YACVVDLLARMGNLSK 927

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           A    E M    I+P  + +  +LS C     V+  +KV E +   + + P+   Y
Sbjct: 928 AYKFIESM---PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI---FELEPDNTRY 977


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 195/628 (31%), Positives = 334/628 (53%), Gaps = 12/628 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L+ GR  H LI       + FV  +++++YAKC  I +   + ++M + D
Sbjct: 151 LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKD 210

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+AGYA+N    +A    L++     +P+  T  ++L     + A+  G+ +H 
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +  + S   V+NALL MY KCG    A  VF+G+  + V+SW  +I+G  Q+G+ E+
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                  M ++G  P   T    L +CA+L +   G+  H  + K  +     V  +++ 
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLIS 390

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    +  A      + K+  +V+WNA I G+ +N   +EA+  F  M       D F
Sbjct: 391 MYSKCKRVDIAASIFNNLEKT--NVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCF 448

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T   ++ A +        + IH   V++  ++NV V ++L++ Y KCG+ + A ++F  +
Sbjct: 449 TLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMM 508

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
               V++WN+MI  Y  +G  ++ + LF +M    ++P + TFL+V+SACSHSG V++G 
Sbjct: 509 QERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGL 568

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
            +F+SM ++Y + P   HYS MVDLLGRAG+L+ A  FI  +PIKP   +   +  AC+ 
Sbjct: 569 LLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKI 628

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  ++++ +LDPD+   +V L+N+YA   +     + R  M+ K + K PGCS
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
           W+E+ N+I+ F+S + +H E  K+Y  L+ L  +I+  G+           ++ K+  + 
Sbjct: 689 WVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIHDVEEDVKKQLLS 748

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSERLA+ FGL++          + L 
Sbjct: 749 SHSERLAIAFGLLNTSPGTTLHIRKNLR 776



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 217/434 (50%), Gaps = 16/434 (3%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHAL--ITKTAVCGDQFVTASL 158
           SN++P   YS      +   + +L  C+ ++ L     Y  L  I K     +      +
Sbjct: 36  SNSIPTRVYS-----HRHPSVVLLENCTSKKEL-----YQILPFIIKNGFYNEHLFQTKV 85

Query: 159 VNMYAKCGDIKSMVAVVKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           ++++ K G       V + +   LD+   + +L GYAKN+    A  FFL++   +V+  
Sbjct: 86  ISLFCKFGSNSEAARVFEHVELKLDVLY-HIMLKGYAKNSSLGDALCFFLRMMCDEVRLV 144

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
              Y+ +L +CG    + +G+++H   +   + S   V  A++++Y KC  +++A  +FE
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  ++++SWT ++ G+ Q+G  ++ L+LV  M+E G  P+  T    L + A ++   +
Sbjct: 205 RMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRI 264

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H    + G      V  A++DMY   G    A+   K M +S + VSWN  I G  
Sbjct: 265 GRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGM-RSKTVVSWNTMIDGCA 323

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N ++EEA   F +M+         T   +L AC+ L  L     +H  + K K +SNV 
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS 383

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V +SLI  Y+KC   + A  +F+ L   + V+WN+MI  Y+QNG  ++A+ LF  M  +G
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQG 442

Query: 518 IRPTNSTFLAVLSA 531
           I+    T + V++A
Sbjct: 443 IKLDCFTLVGVITA 456



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 164/380 (43%), Gaps = 30/380 (7%)

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
            V L +C S +  +    F   +IK G        T ++ ++   G   EA +  + + +
Sbjct: 51  VVLLENCTSKKELYQILPF---IIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHV-E 106

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               V ++  + G+ +N    +A+  F +M+ ++       Y+ +L+ C     L    +
Sbjct: 107 LKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGRE 166

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH  I+ + FESN+ V ++++  Y KC   ++A ++F ++   D+VSW +++  Y+QNG 
Sbjct: 167 IHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGH 226

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV--------FESMVKEYGI 554
           A++A+ L  +M   G +P + T +++L A +    ++ G+ +        FES+V     
Sbjct: 227 AKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNA 286

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFI 612
           L         +D+  + G   IA +    +  K T   W  +   C     S+   A F+
Sbjct: 287 L---------LDMYFKCGSARIARLVFKGMRSK-TVVSWNTMIDGCAQNGESEEAFATFL 336

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
                 LD  +    VT+  +        D E  R     K + K    S + V N +  
Sbjct: 337 KM----LDEGEVPTRVTMMGVLLACANLGDLE--RGWFVHKLLDKLKLDSNVSVMNSLIS 390

Query: 673 FFSQNKSHSEMPKVYEKLKQ 692
            +S+ K       ++  L++
Sbjct: 391 MYSKCKRVDIAASIFNNLEK 410


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 198/619 (31%), Positives = 347/619 (56%), Gaps = 31/619 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L LG + HA   K+    D  V  + ++MYAKC +++    +      L+
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY++     +A   F +L    +  +  + S +   C  +  + EG Q++ 
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 364

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+NA + MY KC  + +A  VF+ + +R+ +SW AII   +Q+G   +
Sbjct: 365 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 424

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGDFVGTAI 360
            L L   M    I+P+E+TF   L +C       +GY    H+ ++K GMA    VG ++
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSL 481

Query: 361 VDMYSGLGEIWEAKK-------------QLKEMGKSASS------VSWNAQIAGFFRNQK 401
           +DMYS  G I EA+K              ++E+ K  +       VSWN+ I+G+   ++
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E+A   F++M+      D+FTY+++L  C+ L S    +QIH++++K + +S+V++ S+
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 601

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y+KCG   D+  +F +    D V+WN+MI  Y+ +G+  +AI LFE+M++E I+P 
Sbjct: 602 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 661

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + TF+++L AC+H GL+  G + F  M ++YG+ P+  HYS MVD+LG++GK++ AL  I
Sbjct: 662 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 721

Query: 582 SNLPIKPTAPIWRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
             +P +    IWR L   C  H +++++AE  +  +L LDP D++ Y  LSN+YA+AG+ 
Sbjct: 722 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 781

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL---MQQI 697
               + R+ M+  ++ KEPGCSW+E+ ++++ F   +K+H    ++YE+L  +   M+  
Sbjct: 782 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF 841

Query: 698 ED---IGHTDNEKEDRVLY 713
           +D   +   + E+ED+  Y
Sbjct: 842 DDSSFVRGVEVEEEDQWCY 860



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 182/651 (27%), Positives = 295/651 (45%), Gaps = 66/651 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF-PDGF-----IDDGC 100
           SA  +F+K P R  +S + +I              NGYS  ND F  + F     + D  
Sbjct: 59  SASMVFDKMPLRDVVSWNKMI--------------NGYSKSNDMFKANSFFNMMPVRDVV 104

Query: 101 SNTVPVTCY--------SLESLLD----------KQFVIEVLSYCSREECLELGRRYHAL 142
           S    ++ Y        S+E  +D          + F I +L  CS  E   LG + H +
Sbjct: 105 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI-ILKVCSFLEDTSLGMQIHGI 163

Query: 143 ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
           + +     D    ++L++MYAK       + V + +P  +  S + ++AG  +N L   A
Sbjct: 164 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 223

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
             FF ++  ++   +   Y+++L  C +LS +  G QLHA  +K  + +   V  A L M
Sbjct: 224 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 283

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KC  M+DA+ +F+     N  S+ A+I G+ Q     K L L   +   G+  +E + 
Sbjct: 284 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 343

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           +    +CA ++    G   +   IK  ++L   V  A +DMY     + EA +   EM +
Sbjct: 344 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-R 402

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
              +VSWNA IA   +N K  E +  F  M+R+    DEFT+ SILKAC+   SL    +
Sbjct: 403 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGME 461

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ-LTAADV-------------- 487
           IHS IVKS   SN  VG SLI+ Y+KCG  E+AE++ S+    A+V              
Sbjct: 462 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 521

Query: 488 -----VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
                VSWNS+I  Y    ++  A +LF +M+  GI P   T+  VL  C++      G+
Sbjct: 522 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 581

Query: 543 KVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           ++   ++K+   L  + +  S +VD+  + G L  + +      ++     W  +     
Sbjct: 582 QIHAQVIKKE--LQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYA 638

Query: 602 CHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            H   + A +   + ILE    +   ++++    A  GL     E   +MK
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 689



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 236/482 (48%), Gaps = 34/482 (7%)

Query: 127 CSREECLELGRRYHA---------------LITKTAVCGDQFVTASLV------------ 159
           C+++  LELG++ HA                + +       FV+AS+V            
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 160 ----NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
               N Y+K  D+    +    MP  D+ S N +L+GY +N    ++   F+ +    ++
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +  T++ +L +C  L     G Q+H   +++   +    ++ALL MY K     ++  V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+ ++N +SW+AII G  Q+      L+    M++     ++  +   L SCA+L   
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   HA  +K   A    V TA +DMY+    + +A+  L +  ++ +  S+NA I G
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI-LFDNSENLNRQSYNAMITG 314

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + + +   +A+  F +++ +    DE + S + +AC+L+  L+   QI+   +KS    +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLD 374

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V V ++ I+ Y KC +  +A RVF ++   D VSWN++I A+ QNG+  + + LF  M+ 
Sbjct: 375 VCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR 434

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             I P   TF ++L AC+  G +  G ++  S+VK  G+    +    ++D+  + G +E
Sbjct: 435 SRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIE 492

Query: 576 IA 577
            A
Sbjct: 493 EA 494


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 211/678 (31%), Positives = 345/678 (50%), Gaps = 62/678 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAV----------------CGDQ-------------- 152
           VL  C+  + ++ GRR H++I    V                CGD               
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 153 -FVTASLVNMYAKCGDIKSMVAVVKQMPYL------------------DIASCNCLLAGY 193
            F+   L+N YAK G+ +  +++ K+M  L                  D+ S N +++GY
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGY 226

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             N L ++    F ++  + +  +  T  +++A C +   +  G+ LH   +K  +  + 
Sbjct: 227 VSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKEL 286

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            ++N LL MY K G +  A  VFE + +R+V+SWT++I G+ + G  +  +RL   M ++
Sbjct: 287 TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 346

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           GI P+ +T T  L +CA       G   H  + +  M    FV  A++DMY+  G + +A
Sbjct: 347 GISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDA 406

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
                EM +    VSWN  I G+ +N    EA+  F +M  N    +  T + IL AC+ 
Sbjct: 407 HSVFSEM-QVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSKP-NSITMACILPACAS 464

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L +L   ++IH  I+++ F  + HV ++L++ Y KCG+   A  +F  +   D+VSW  M
Sbjct: 465 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 524

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y  +G   +AI  F +M   GI P   +F+++L ACSHSGL+ +G   F  M     
Sbjct: 525 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCC 584

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P+  HY+C+VDLL RAG L  A  FI  +PI+P A IW  L   CR + D+K+AE ++
Sbjct: 585 IEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVA 644

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           + + EL+P++   YV L+N+YAEA    + ++ R+ +  + + K PGCSWIE+  K++ F
Sbjct: 645 EHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIF 704

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGF 722
            + + SH    K+   LK+   ++++ GH            D EKE  +  HSE++A+ F
Sbjct: 705 VTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAF 764

Query: 723 GLISLPAKNKFECSRTLE 740
           G++SLP       ++ L 
Sbjct: 765 GILSLPPGKTVRVTKNLR 782


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 202/626 (32%), Positives = 351/626 (56%), Gaps = 25/626 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPY 180
           V+  CS  + + +GR     + KT     D  V  SL++M+ K     ++   V  +M  
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           L++ +   ++    +     +A  FFL +     + + +T S++ + C  L  +  GKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H+  ++   +     S  L+ MY KC   G ++D   VF+ +   +V+SWTA+I G+ ++
Sbjct: 292 HSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 298 GDY-EKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +   + + L   M   G ++PN +TF+ A  +C +L +  +G     Q  KRG+A    
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  +++ M+     + +A++  + + +  + VS+N  + G  RN   E+A +  S++   
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +     FT++S+L   + + S+   EQIHS++VK     N  V ++LI  Y+KCGS + A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF+ +   +V+SW SMI  ++++G A + +  F +M+ EG++P   T++A+LSACSH 
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G + F SM +++ I P+  HY+CMVDLL RAG L  A  FI+ +P +    +WR 
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
              ACR HS+ ++ +  +++ILELDP++ A Y+ LSN+YA AG   ++ E R+ MK + +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-------- 707
            KE GCSWIEV +KI++F+  + +H    ++Y++L +L+ +I+  G+  +          
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEE 768

Query: 708 ------EDRVLY-HSERLAVGFGLIS 726
                 ++R+LY HSE++AV FGLIS
Sbjct: 769 ENDEAEKERLLYQHSEKIAVAFGLIS 794



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 225/465 (48%), Gaps = 14/465 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD---IKSMVAVVKQMP 179
           +L  C R     LG+  HA + +  +  D  +  SL+++Y+K GD    + +   +++  
Sbjct: 68  LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S + ++A Y  N     A   F++   + + PN Y Y+ ++  C +   +  G+ 
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 240 LHAQTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                MK  +  S   V  +L+ M++K     E+A  VF+ + + NV++WT +I    Q 
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + +R    M   G + +++T +   ++CA L N  +G   H+  I+ G+   D V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVE 305

Query: 358 TAIVDMY---SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-QKTEEAIEAFSQMV 413
            ++VDMY   S  G + + +K    M +  S +SW A I G+ +N     EAI  FS+M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364

Query: 414 -RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            +     + FT+SS  KAC  L      +Q+  +  K    SN  V +S+I  + K    
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA+R F  L+  ++VS+N+ +    +N    +A  L  ++    +  +  TF ++LS  
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++ G ++ G+++   +VK  G+   +   + ++ +  + G ++ A
Sbjct: 485 ANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTA 528



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 193/379 (50%), Gaps = 17/379 (4%)

Query: 210 DGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           DGI  +P +  T+S++L  C        GK +HA+ ++      + + N+L+++Y K G 
Sbjct: 55  DGI--RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGD 112

Query: 269 MEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
              AE VFE + +   R+V+SW+A++  +  +G     +++     E G+ PN+Y +T  
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKS 383
           + +C++     +G +    ++K G    D  VG +++DM+  G      A K   +M + 
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE- 231

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            + V+W   I    +     EAI  F  MV +    D+FT SS+  AC+ L +L+  +Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           HS  ++S    +V    SL++ Y KC   GS +D  +VF ++    V+SW ++I  Y +N
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 501 -GRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
              A +AI LF +M+ +G + P + TF +   AC +    + G++V     K  G+    
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNS 408

Query: 559 AHYSCMVDLLGRAGKLEIA 577
           +  + ++ +  ++ ++E A
Sbjct: 409 SVANSVISMFVKSDRMEDA 427



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 405 AIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           A+ A   M R+     D  T+SS+LK+C         + +H+R+++   E +  + +SLI
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104

Query: 464 EAYNKCGSWEDAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             Y+K G    AE VF    +    DVVSW++M+  Y  NGR   AI +F + +  G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +  + AV+ ACS+S  V  G+     ++K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 211/731 (28%), Positives = 377/731 (51%), Gaps = 59/731 (8%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN---DSFPDGFIDDGCSNTV 104
           A +LF + P R  +++ + + +GY    +  +S   + + +   DS+P+ F       T+
Sbjct: 90  AVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAF-------TL 141

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG-------------- 150
                S  +L      +++L+   + +  +      AL+     CG              
Sbjct: 142 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE 201

Query: 151 -DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
              F   S++  Y K   +   + +   MP  D+ S N +++  +++    +A    + +
Sbjct: 202 PTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM 261

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               V+ +  TY++ L  C  LS++  GKQLHAQ ++        V++AL+ +Y K G  
Sbjct: 262 QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCF 321

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           ++A+ VF  L  RN ++WT +I+GF Q+G + + + L   MR + +  +++     ++ C
Sbjct: 322 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 381

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY------------------------- 364
            S  +  +G   H+  +K G      V  +++ MY                         
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWT 441

Query: 365 ------SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-A 417
                 S +G + +A++    M +  + ++WNA +  + ++   E+ +  +  M+  +  
Sbjct: 442 SMITAYSQVGNVAKAREFFDGMSEK-NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 500

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  TY ++ K C+ L +    +QI  R VK     +  V +++I  Y+KCG   +A +
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 560

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  L   D+VSWN+MI  YSQ+G  ++AI +F+ ++  G +P   +++AVLS CSHSGL
Sbjct: 561 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 620

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           VQ+G+  F+ M + + I P   H+SCMVDLLGRAG L  A   I ++P+KPTA +W  L 
Sbjct: 621 VQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 680

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +AC+ H + ++AE  +K + ELD  D+  Y+ ++ +YA+AG   D+ + RKLM+ K I K
Sbjct: 681 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 740

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSER 717
            PG SW+EV NK++ F + + SH ++  + +KL +LM++I  +G+   +     ++HSE+
Sbjct: 741 NPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEK 800

Query: 718 LAVGFGLISLP 728
           LAV FGL++LP
Sbjct: 801 LAVAFGLMTLP 811



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 37/436 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N YAK G +   V +  +MP  D+AS N L++GY ++  +  +   FL +    D  P
Sbjct: 77  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 136

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-------- 268
           N +T +  +  CG+L       QL A   K      + V+ AL+ M+++CG         
Sbjct: 137 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 196

Query: 269 -----------------------MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                  ++ A  +F+ + +R+V+SW  +++   Q G   + L 
Sbjct: 197 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +V  M+  G+  +  T+T +L +CA L +   G   HAQVI+    +  +V +A+V++Y+
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 316

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EAK     +    ++V+W   I+GF +     E++E F+QM       D+F  +
Sbjct: 317 KSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 375

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++  C     L    Q+HS  +KS     V V +SLI  Y KC + + AE +F  +   
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 435

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW SMI AYSQ G   KA   F+ M  + +   N    A+L A    G  +DG +++
Sbjct: 436 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWN----AMLGAYIQHGAEEDGLRMY 491

Query: 546 ESMVKEYGILPEEAHY 561
           + M+ E  + P+   Y
Sbjct: 492 KVMLSEEYVRPDWVTY 507



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 31/307 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N +L  Y K G + DA  +F  +  R+V SW  +++G+ Q   Y   L     M   G  
Sbjct: 75  NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 134

Query: 317 -PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN +T   A+ SC +L    +     A V K        V  A+VDM+   G +  A +
Sbjct: 135 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 194

Query: 376 ------------------------------QLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
                                         +L +       VSWN  ++   ++ +  EA
Sbjct: 195 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 254

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++    M       D  TY+S L AC+ L SL   +Q+H++++++    + +V S+L+E 
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 314

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G +++A+ VF+ L   + V+W  +I  + Q G   +++ LF +M  E +       
Sbjct: 315 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 374

Query: 526 LAVLSAC 532
             ++S C
Sbjct: 375 ATLISGC 381



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 142/316 (44%), Gaps = 68/316 (21%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL---- 377
           F  AL SC +          H +++  G+A   F+   ++  Y   G + +A++ L    
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 378 ---------------KEMGKSASSV------------SWNAQIAGFFRNQKTEEAIEAFS 410
                           ++G+ + +V            SWN  ++G+F++++   ++E F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 411 QMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            M R+ D+  + FT +  +K+C  L   +   Q+ + + K   + +  V ++L++ + +C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186

Query: 470 GSWEDAERVFSQLTAA-------------------------------DVVSWNSMIKAYS 498
           G+ + A R+F ++                                  DVVSWN M+ A S
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+GR R+A+ +   M  +G+R  ++T+ + L+AC+    ++ G+++   +++    LP  
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN---LPHI 303

Query: 559 AHY--SCMVDLLGRAG 572
             Y  S +V+L  ++G
Sbjct: 304 DPYVASALVELYAKSG 319



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER-VFSQL 482
           ++  L++C    +LA    +H R+V     S V + ++L+ AY  CG+  DA R +   +
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V++ N M+  Y++ GR   A+ LF +M    +   N+           SG  Q  Q
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLM---------SGYFQSRQ 117

Query: 543 -----KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
                + F SM +     P     +C +   G  G   +AL  ++
Sbjct: 118 YLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 162


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 197/602 (32%), Positives = 321/602 (53%), Gaps = 38/602 (6%)

Query: 151  DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
            + F   +L++ +A+ G      A+   +P  D  S N ++A  A+++    A  F   + 
Sbjct: 825  NTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMH 884

Query: 211  GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              D   N Y++++ L+ C +      G Q+HA   K  +     + +ALL MY KC   E
Sbjct: 885  ADDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPE 944

Query: 271  DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            +A  VFE + +RN++SW ++I  ++Q+G   + L L   M + G  P+E T    +++CA
Sbjct: 945  EARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACA 1004

Query: 331  SLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSA----- 384
             L     G   HA+V+K      D V   A+VDMY+  G    A+     M   +     
Sbjct: 1005 GLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSET 1064

Query: 385  -------------------------SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
                                     + ++WN  IA + +N + EEA+  F ++ R     
Sbjct: 1065 SLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWP 1124

Query: 420  DEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSSLIEAYNKCGSWE 473
              +TY ++L AC  +  L   +Q H  ++K  F      ES+V VG+SL++ Y K GS +
Sbjct: 1125 THYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 1184

Query: 474  DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            D  +VF ++ A D VSWN+MI  ++QNGRA+ A+ LFE+M+     P + T + VLSAC 
Sbjct: 1185 DGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACG 1244

Query: 534  HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
            HSGLV++G++ F SM +++GI+P + HY+CM+DLLGRAG L+     I  + ++P A +W
Sbjct: 1245 HSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLW 1304

Query: 594  RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
              L  +CR H +++M E+ + ++ ELDP ++  YV LSNMYAE G  AD    R  MK +
Sbjct: 1305 ASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHR 1364

Query: 654  EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY 713
             +SK+PGCSWIE+  K+  F +++  H    +++  L+ +  Q+  +   D+E  D ++ 
Sbjct: 1365 GVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRVS-VDSENADGMMN 1423

Query: 714  HS 715
            +S
Sbjct: 1424 YS 1425



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 267/533 (50%), Gaps = 38/533 (7%)

Query: 123 VLSYCSREECLEL--GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           VLS C+  ECL+L   R+ H  I K     +  +  +LV++Y  C  +         +  
Sbjct: 157 VLSCCA--ECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILE 214

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            +  S N ++  Y    + D A   F ++    V+P  YT S  +  C   +A++EG+ +
Sbjct: 215 PNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCI 274

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMME------------------------------ 270
           HA  ++  Y     V ++++ MY KCG M+                              
Sbjct: 275 HAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRI 334

Query: 271 -DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            DA+ VFEG+ +RN++SW A++ G+ +  D    L L   MR++  + +  T    L++C
Sbjct: 335 ADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC 394

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK-EMGKSASSVS 388
             + +   G   HA  IK G      +  A+V MYS  G +  A++ L  EMG    S S
Sbjct: 395 TGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYS 454

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN+ I+G+ R+  +E A+ A ++M +++   ++ T+SS L AC+ +  L    QIH+ ++
Sbjct: 455 WNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMI 513

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +  +E +  + S LI+ Y KC  ++ + R+F    + DV+ WNSMI   + +G+    + 
Sbjct: 514 RKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLD 573

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF++M  +GI+  + TFL  L +C   G V+ G+  F  M+ E  I+P   HY CM++LL
Sbjct: 574 LFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELL 632

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           G+ G +     F+ ++P +PT  +W  +F  CR + + K+ E  +K I + +P
Sbjct: 633 GKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNP 685



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 217/481 (45%), Gaps = 37/481 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+    +   A CG +     +   MP  D  S N ++   ++     +A S F  ++ +
Sbjct: 86  FLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSL 145

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            ++P   T +++L+ C     +   +QLH    K  + S   +  AL+ +Y  C ++ DA
Sbjct: 146 GIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADA 205

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
              F+ +++ N ISW  I+  +   G  +  + +   M   G+ P  YT + A+ +C   
Sbjct: 206 RRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDN 265

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY---------------------------- 364
                G   HA V++ G      V +++VDMY                            
Sbjct: 266 NALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIV 325

Query: 365 SGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           SGL   G I +AK+  + M K  + VSWNA + G+ R+     A+  F QM +     D 
Sbjct: 326 SGLASCGRIADAKRVFEGM-KERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDA 384

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER--VF 479
            T  S+L AC+ +  +   E++H+  +K  F S+  + ++L+  Y+KCG    AER  +F
Sbjct: 385 ITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLF 444

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
              +  D  SWNS+I  Y ++  +  A+    KM  E + P  STF + L+AC++  L++
Sbjct: 445 EMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLK 503

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G ++   M+++ G   ++   S ++D+  +  + + ++      P +    +W  +   
Sbjct: 504 QGMQIHAYMIRK-GYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVI-LWNSMIFG 561

Query: 600 C 600
           C
Sbjct: 562 C 562



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 201/415 (48%), Gaps = 49/415 (11%)

Query: 124  LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
            LS C+ E+    G + HAL++K+    D ++ ++L++MYAKC   +    V + MP  +I
Sbjct: 899  LSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNI 958

Query: 184  ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
             S N L+  Y +N    +A   F+ +      P+  T +++++ C  L+A  EG+Q+HA+
Sbjct: 959  VSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHAR 1018

Query: 244  TMKL-QYLSKTAVSNALLTMYIKCGM-------------------------------MED 271
             +K  ++     +SNAL+ MY KCG                                +ED
Sbjct: 1019 VVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVED 1078

Query: 272  AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
            A+ VF  +V++NVI+W  +I  + Q+G+ E+ LRL   ++ + + P  YT+   L +C +
Sbjct: 1079 AQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGN 1138

Query: 332  LRNSHMGYMFHAQVIKRGMAL------GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
            + +  +G   H  V+K G           FVG ++VDMY   G I +  K  + M  +  
Sbjct: 1139 VADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMA-ARD 1197

Query: 386  SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            +VSWNA I G  +N + ++A+  F +M+ +  + D  T   +L AC      +   +   
Sbjct: 1198 NVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSAC----GHSGLVEEGR 1253

Query: 446  RIVKSKFESNVHVGSS-----LIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMI 494
            R  +S  E +  + S      +I+   + G  ++ E +  +++   D V W S++
Sbjct: 1254 RYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLL 1308



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 190/399 (47%), Gaps = 69/399 (17%)

Query: 245  MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI------------------- 285
            +K  ++++T + N L++ Y + G + DA  VF+ +   N                     
Sbjct: 787  LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 286  ------------SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
                        S+ A+I    QH      L  +  M  D    N Y+F  AL++CA+ +
Sbjct: 847  ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906

Query: 334  NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
            +S  G   HA V K   A   ++G+A++DMY+      EA++  + M +  + VSWN+ I
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPER-NIVSWNSLI 965

Query: 394  AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KF 452
              + +N    EA+  F  M++     DE T +S++ AC+ L +     Q+H+R+VKS +F
Sbjct: 966  TCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRF 1025

Query: 453  ESNVHVGSSLIEAYNKCG-------------------------------SWEDAERVFSQ 481
              ++ + ++L++ Y KCG                               + EDA+ VFSQ
Sbjct: 1026 REDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQ 1085

Query: 482  LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
            +   +V++WN +I AY+QNG   +A+ LF ++  E + PT+ T+  VL+AC +   +Q G
Sbjct: 1086 MVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLG 1145

Query: 542  QKVFESMVKE---YGILPEEAHY--SCMVDLLGRAGKLE 575
            Q+    ++KE   +   PE   +  + +VD+  + G ++
Sbjct: 1146 QQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSID 1184



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 196/445 (44%), Gaps = 42/445 (9%)

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG + DA  +F+ +  R+  SW AII    + G   + L L   M   GI P + T    
Sbjct: 98  CGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASV 157

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L+ CA   +       H  + KR       +GTA+VD+Y     + +A++   ++    +
Sbjct: 158 LSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDI-LEPN 216

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           ++SWN  +  +      + A++ F +M+        +T S  + AC    +L     IH+
Sbjct: 217 AISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHA 276

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWE-------------------------------D 474
            +++  +E +VHV SS+++ Y KCG+ +                               D
Sbjct: 277 FVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIAD 336

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A+RVF  +   ++VSWN+M+  Y ++     A++LF++M  E       T  +VLSAC+ 
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTG 396

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIFISNLPIKPTAPIW 593
              +  G++V    +K  G        + +V +  + G L  A  + +  +  +  +  W
Sbjct: 397 ILDIGKGEEVHAFAIK-CGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSW 455

Query: 594 RPLFAACRCHSDLKMAEF-ISKQILELDPDDAAVYVTL---SNMY-AEAGLQADAEEQRK 648
             L +    HS  + A + ++K   E+ P+ +     L   +N++  + G+Q  A   RK
Sbjct: 456 NSLISGYERHSMSEAALYALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRK 515

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRF 673
             ++ +I +      I++Y K  +F
Sbjct: 516 GYEIDDILRS---VLIDMYCKCRQF 537



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/419 (18%), Positives = 157/419 (37%), Gaps = 56/419 (13%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ C+    L+ G + HA + +     D  + + L++MY KC      + + +  P  D+
Sbjct: 493 LAACANIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDV 552

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N ++ G A +   +     F ++    ++ +  T+   L  C S   +  G+     
Sbjct: 553 ILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTL 612

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYEK 302
            M    + +      ++ +  K G M + E   E +  +     W  I +  +++G+ + 
Sbjct: 613 MMDESIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKL 672

Query: 303 PLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             R   C+   + + P ++                                      A V
Sbjct: 673 GERAAKCINDSNPLTPVQFV-------------------------------------ATV 695

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSV--SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           D  S  G            G+    +  S   + +G      T   +  +  M R+    
Sbjct: 696 DYESNDGGREAESTSFSSEGEGCEELPFSLEGEASGSLPAPLTTRPLAIWYGMARHHHH- 754

Query: 420 DEFTYSSILKACSLL-------PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
               + S L+A + L       P+L      H+R +KS F +   + ++L+ AY + G  
Sbjct: 755 ---HFVSHLRASAPLADLLRSAPNLPAARAAHARALKSPFVAETFLLNTLVSAYARLGRL 811

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            DA RVF ++   +  S+N+++ A+++ GR   A  LF  +      P   ++ AV++A
Sbjct: 812 PDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIP----DPDQCSYNAVIAA 866


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 198/619 (31%), Positives = 347/619 (56%), Gaps = 31/619 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L LG + HA   K+    D  V  + ++MYAKC +++    +      L+
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY++     +A   F +L    +  +  + S +   C  +  + EG Q++ 
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V+NA + MY KC  + +A  VF+ + +R+ +SW AII   +Q+G   +
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGDFVGTAI 360
            L L   M    I+P+E+TF   L +C       +GY    H+ ++K GMA    VG ++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSL 523

Query: 361 VDMYSGLGEIWEAKK-------------QLKEMGKSASS------VSWNAQIAGFFRNQK 401
           +DMYS  G I EA+K              ++E+ K  +       VSWN+ I+G+   ++
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E+A   F++M+      D+FTY+++L  C+ L S    +QIH++++K + +S+V++ S+
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y+KCG   D+  +F +    D V+WN+MI  Y+ +G+  +AI LFE+M++E I+P 
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + TF+++L AC+H GL+  G + F  M ++YG+ P+  HYS MVD+LG++GK++ AL  I
Sbjct: 704 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763

Query: 582 SNLPIKPTAPIWRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
             +P +    IWR L   C  H +++++AE  +  +L LDP D++ Y  LSN+YA+AG+ 
Sbjct: 764 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 823

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL---MQQI 697
               + R+ M+  ++ KEPGCSW+E+ ++++ F   +K+H    ++YE+L  +   M+  
Sbjct: 824 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF 883

Query: 698 ED---IGHTDNEKEDRVLY 713
           +D   +   + E+ED+  Y
Sbjct: 884 DDSSFVRGVEVEEEDQWCY 902



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 182/651 (27%), Positives = 295/651 (45%), Gaps = 66/651 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF-PDGFID-----DGC 100
           SA  +F+K P R  +S + +I              NGYS  ND F  + F +     D  
Sbjct: 101 SASMVFDKMPLRDVVSWNKMI--------------NGYSKSNDMFKANSFFNMMPVRDVV 146

Query: 101 SNTVPVTCY--------SLESLLD----------KQFVIEVLSYCSREECLELGRRYHAL 142
           S    ++ Y        S+E  +D          + F I +L  CS  E   LG + H +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI-ILKVCSFLEDTSLGMQIHGI 205

Query: 143 ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
           + +     D    ++L++MYAK       + V + +P  +  S + ++AG  +N L   A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
             FF ++  ++   +   Y+++L  C +LS +  G QLHA  +K  + +   V  A L M
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KC  M+DA+ +F+     N  S+ A+I G+ Q     K L L   +   G+  +E + 
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           +    +CA ++    G   +   IK  ++L   V  A +DMY     + EA +   EM +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-R 444

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
              +VSWNA IA   +N K  E +  F  M+R+    DEFT+ SILKAC+   SL    +
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGME 503

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ-LTAADV-------------- 487
           IHS IVKS   SN  VG SLI+ Y+KCG  E+AE++ S+    A+V              
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563

Query: 488 -----VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
                VSWNS+I  Y    ++  A +LF +M+  GI P   T+  VL  C++      G+
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623

Query: 543 KVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           ++   ++K+   L  + +  S +VD+  + G L  + +      ++     W  +     
Sbjct: 624 QIHAQVIKKE--LQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYA 680

Query: 602 CHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            H   + A +   + ILE    +   ++++    A  GL     E   +MK
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 237/486 (48%), Gaps = 34/486 (6%)

Query: 123 VLSYCSREECLELGRRYHA---------------LITKTAVCGDQFVTASLV-------- 159
           V   C+++  LELG++ HA                + +       FV+AS+V        
Sbjct: 54  VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113

Query: 160 --------NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
                   N Y+K  D+    +    MP  D+ S N +L+GY +N    ++   F+ +  
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             ++ +  T++ +L +C  L     G Q+H   +++   +    ++ALL MY K     +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           +  VF+G+ ++N +SW+AII G  Q+      L+    M++     ++  +   L SCA+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G   HA  +K   A    V TA +DMY+    + +A+  L +  ++ +  S+NA
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI-LFDNSENLNRQSYNA 352

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I G+ + +   +A+  F +++ +    DE + S + +AC+L+  L+   QI+   +KS 
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
              +V V ++ I+ Y KC +  +A RVF ++   D VSWN++I A+ QNG+  + + LF 
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M+   I P   TF ++L AC+  G +  G ++  S+VK  G+    +    ++D+  + 
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKC 530

Query: 572 GKLEIA 577
           G +E A
Sbjct: 531 GMIEEA 536



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 120/514 (23%), Positives = 226/514 (43%), Gaps = 38/514 (7%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           +FS+F          +   +S +   C    A++ GKQ HA  +   +   T V N LL 
Sbjct: 32  SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK-------------------------- 295
           +Y        A  VF+ +  R+V+SW  +ING+                           
Sbjct: 92  VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151

Query: 296 -----QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
                Q+G+  K + +   M  +GI+ +  TF + L  C+ L ++ +G   H  V++ G 
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                  +A++DMY+      E+ +  + + +  +SVSW+A IAG  +N     A++ F 
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLALKFFK 270

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +M + +A   +  Y+S+L++C+ L  L    Q+H+  +KS F ++  V ++ ++ Y KC 
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 330

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + +DA+ +F      +  S+N+MI  YSQ     KA++LF +++  G+     +   V  
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+    + +G +++   +K   +  +    +  +D+ G+   L  A      +  +  A
Sbjct: 391 ACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDA 448

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
             W  + AA   +       F+   +L   ++PD+   + ++        L    E    
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE-FTFGSILKACTGGSLGYGMEIHSS 507

Query: 649 LMKMKEISKEP-GCSWIEVYNKIYRFFSQNKSHS 681
           ++K    S    GCS I++Y+K        K HS
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 214/670 (31%), Positives = 347/670 (51%), Gaps = 86/670 (12%)

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           +C ++ S  D  +V+  LS C R   ++  R+   ++       D+    +++  YA  G
Sbjct: 34  SCGTVHSSSDSNWVLSNLSKCGR---VDDARKLFDVMPDR----DECSWNTMIGAYANSG 86

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +     +  + P     + + L++GY +     +A   F ++     +PN +T+ ++L 
Sbjct: 87  RLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLR 146

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-GLVQRNVI 285
           +C     +++GKQ+HA  +K Q+ S   V   L+ MY KC  + +AE +FE    +RN +
Sbjct: 147 VCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHV 206

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
            WTA++ G+ Q+GD  K +     MR +GI+ N++TF   L +C S+     G   H  +
Sbjct: 207 LWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCI 266

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           ++ G     FVG+A+VDMYS  G++  A++ L+ M +    VSWN+ I G  R    EEA
Sbjct: 267 VRSGFGANVFVGSALVDMYSKCGDLSNARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEA 325

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  F  M       DEFTY          PSL                    V ++L++ 
Sbjct: 326 LSLFRIMHLRHMKIDEFTY----------PSL--------------------VNNALVDM 355

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G ++ A  VF ++T  DV+SW S++     NG   +A+ LF +M + GI P     
Sbjct: 356 YAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 415

Query: 526 LAVLSACSHS--------GLVQDGQKVFESMVKE-------------------------- 551
            AVLSA  +S        G ++D  KVF+SM  +                          
Sbjct: 416 AAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSME 475

Query: 552 --YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             YGI P   HY+CM+DLLGR+GKL  A   ++ + ++P A +W+ L AACR H ++++ 
Sbjct: 476 EVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELG 535

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           E  +  + EL+P +A  YV LSN+Y+ AG   +A + R+LMK++ +SKEPGCSWIE+ +K
Sbjct: 536 ERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSK 595

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNE-KEDRVLYHSERL 718
           ++RF S+++SH    ++Y K+ ++M  I++ G+           D E KE  + YHSE+L
Sbjct: 596 VHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMDEEGKELGLAYHSEKL 655

Query: 719 AVGFGLISLP 728
           AV FGL+++P
Sbjct: 656 AVAFGLLTMP 665



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 198/477 (41%), Gaps = 74/477 (15%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           YT+S    +C  L   +    +         +  ++ SN +L+   KCG ++DA  +F+ 
Sbjct: 9   YTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDV 66

Query: 279 LVQRNVISWTAIINGFKQHGD--------YEKPLR-----------------------LV 307
           +  R+  SW  +I  +   G         YE P+R                       L 
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             M+ +G  PN++T+   L  C+       G   HA  IK       FV T +VDMY+  
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
             I EA+   +      + V W A + G+ +N    +AIE F  M      C++FT+ SI
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L AC  + +     Q+H  IV+S F +NV VGS+L++ Y+KCG   +A R+   +   D 
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSWNSMI    + G   +A+ LF  M +  ++    T+ ++++                 
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVN----------------- 349

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
                         + +VD+  + G  + A      +  K     W  L   C  +   +
Sbjct: 350 --------------NALVDMYAKRGYFDYAFDVFEKMTDKDVIS-WTSLVTGCVHNGSYE 394

Query: 608 MA--EFISKQILELDPDD---AAVYVTLSN----MYAEAGLQADAEEQRKLMKMKEI 655
            A   F   +I+ + PD    AAV   L N    MYA+ G   DA +    M+++++
Sbjct: 395 EALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDV 451


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 211/731 (28%), Positives = 377/731 (51%), Gaps = 59/731 (8%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN---DSFPDGFIDDGCSNTV 104
           A +LF + P R  +++ + + +GY    +  +S   + + +   DS+P+ F       T+
Sbjct: 110 AVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAF-------TL 161

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG-------------- 150
                S  +L      +++L+   + +  +      AL+     CG              
Sbjct: 162 ACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE 221

Query: 151 -DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
              F   S++  Y K   +   + +   MP  D+ S N +++  +++    +A    + +
Sbjct: 222 PTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDM 281

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               V+ +  TY++ L  C  LS++  GKQLHAQ ++        V++AL+ +Y K G  
Sbjct: 282 QSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCF 341

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           ++A+ VF  L  RN ++WT +I+GF Q+G + + + L   MR + +  +++     ++ C
Sbjct: 342 KEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC 401

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY------------------------- 364
            S  +  +G   H+  +K G      V  +++ MY                         
Sbjct: 402 CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWT 461

Query: 365 ------SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-A 417
                 S +G + +A++    M +  + ++WNA +  + ++   E+ +  +  M+  +  
Sbjct: 462 SMITAYSQVGNVAKAREFFDGMSEK-NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYV 520

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  TY ++ K C+ L +    +QI  R VK     +  V +++I  Y+KCG   +A +
Sbjct: 521 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARK 580

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  L   D+VSWN+MI  YSQ+G  ++AI +F+ ++  G +P   +++AVLS CSHSGL
Sbjct: 581 VFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGL 640

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           VQ+G+  F+ M + + I P   H+SCMVDLLGRAG L  A   I ++P+KPTA +W  L 
Sbjct: 641 VQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALL 700

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +AC+ H + ++AE  +K + ELD  D+  Y+ ++ +YA+AG   D+ + RKLM+ K I K
Sbjct: 701 SACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKK 760

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSER 717
            PG SW+EV NK++ F + + SH ++  + +KL +LM++I  +G+   +     ++HSE+
Sbjct: 761 NPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVRTDSTRSEIHHSEK 820

Query: 718 LAVGFGLISLP 728
           LAV FGL++LP
Sbjct: 821 LAVAFGLMTLP 831



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 208/436 (47%), Gaps = 37/436 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQP 216
           ++N YAK G +   V +  +MP  D+AS N L++GY ++  +  +   FL +    D  P
Sbjct: 97  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 156

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-------- 268
           N +T +  +  CG+L       QL A   K      + V+ AL+ M+++CG         
Sbjct: 157 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 216

Query: 269 -----------------------MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                                  ++ A  +F+ + +R+V+SW  +++   Q G   + L 
Sbjct: 217 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 276

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +V  M+  G+  +  T+T +L +CA L +   G   HAQVI+    +  +V +A+V++Y+
Sbjct: 277 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 336

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EAK     +    ++V+W   I+GF +     E++E F+QM       D+F  +
Sbjct: 337 KSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 395

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++  C     L    Q+HS  +KS     V V +SLI  Y KC + + AE +F  +   
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK 455

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW SMI AYSQ G   KA   F+ M  + +   N    A+L A    G  +DG +++
Sbjct: 456 DIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWN----AMLGAYIQHGAEEDGLRMY 511

Query: 546 ESMVKEYGILPEEAHY 561
           + M+ E  + P+   Y
Sbjct: 512 KVMLSEEYVRPDWVTY 527



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 31/307 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N +L  Y K G + DA  +F  +  R+V SW  +++G+ Q   Y   L     M   G  
Sbjct: 95  NVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDS 154

Query: 317 -PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN +T   A+ SC +L    +     A V K        V  A+VDM+   G +  A +
Sbjct: 155 WPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASR 214

Query: 376 ------------------------------QLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
                                         +L +       VSWN  ++   ++ +  EA
Sbjct: 215 LFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREA 274

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++    M       D  TY+S L AC+ L SL   +Q+H++++++    + +V S+L+E 
Sbjct: 275 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 334

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G +++A+ VF+ L   + V+W  +I  + Q G   +++ LF +M  E +       
Sbjct: 335 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 394

Query: 526 LAVLSAC 532
             ++S C
Sbjct: 395 ATLISGC 401



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 142/316 (44%), Gaps = 68/316 (21%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL---- 377
           F  AL SC +          H +++  G+A   F+   ++  Y   G + +A++ L    
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 378 ---------------KEMGKSASSV------------SWNAQIAGFFRNQKTEEAIEAFS 410
                           ++G+ + +V            SWN  ++G+F++++   ++E F 
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 411 QMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            M R+ D+  + FT +  +K+C  L   +   Q+ + + K   + +  V ++L++ + +C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206

Query: 470 GSWEDAERVFSQLTAA-------------------------------DVVSWNSMIKAYS 498
           G+ + A R+F ++                                  DVVSWN M+ A S
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+GR R+A+ +   M  +G+R  ++T+ + L+AC+    ++ G+++   +++    LP  
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN---LPHI 323

Query: 559 AHY--SCMVDLLGRAG 572
             Y  S +V+L  ++G
Sbjct: 324 DPYVASALVELYAKSG 339



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 15/165 (9%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER-VFSQL 482
           ++  L++C    +LA    +H R+V     S V + ++L+ AY  CG+  DA R +   +
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V++ N M+  Y++ GR   A+ LF +M    +   N+           SG  Q  Q
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLM---------SGYFQSRQ 137

Query: 543 -----KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
                + F SM +     P     +C +   G  G   +AL  ++
Sbjct: 138 YLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 182


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 204/622 (32%), Positives = 345/622 (55%), Gaps = 10/622 (1%)

Query: 87   RNDSFPD----GFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRY 139
            +ND F +    G+  +G S+ V      ++S    +D      +LS C+    LE+G ++
Sbjct: 391  KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450

Query: 140  HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
            H++I K  +  + FV  +LV+MYAKCG ++    + ++M   D  + N ++  Y ++   
Sbjct: 451  HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510

Query: 200  DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             +AF  F +++   +  +    ++ L  C  +  + +GKQ+H  ++K          ++L
Sbjct: 511  SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570

Query: 260  LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
            + MY KCG+++DA  VF  L + +V+S  A+I G+ Q+ + E+ + L   M   G++P+E
Sbjct: 571  IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSE 629

Query: 320  YTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSGLGEIWEAKKQLK 378
             TF   + +C    +  +G  FH Q+ KRG +  G+++G +++ MY     + EA     
Sbjct: 630  ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689

Query: 379  EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            E+    S V W   ++G  +N   EEA++ + +M  +    D+ T+ ++L+ CS+L SL 
Sbjct: 690  ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749

Query: 439  TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAY 497
                IHS I     + +    ++LI+ Y KCG  + + +VF ++   ++VVSWNS+I  Y
Sbjct: 750  EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809

Query: 498  SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
            ++NG A  A+ +F+ M    I P   TFL VL+ACSH+G V DG+K+FE M+ +YGI   
Sbjct: 810  AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869

Query: 558  EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
              H +CMVDLLGR G L+ A  FI    +KP A +W  L  ACR H D    E  +++++
Sbjct: 870  VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929

Query: 618  ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
            EL+P +++ YV LSN+YA  G    A   RK+M+ + + K PG SWI+V  + + F + +
Sbjct: 930  ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989

Query: 678  KSHSEMPKVYEKLKQLMQQIED 699
            KSHSE+ K+   L+ L   ++D
Sbjct: 990  KSHSEIGKIEMFLEDLYDLMKD 1011



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 160/582 (27%), Positives = 284/582 (48%), Gaps = 54/582 (9%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D     +++N Y + G +K    +  +M   D+ + N +++G+ K      A  +F  + 
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V+    T  ++L+  G ++ +D G  +HA+ +KL   S   V ++L++MY KC  ME
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VFE L ++N + W A+I G+  +G+  K + L   M+  G + +++TFT  L++CA
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +  +  MG  FH+ +IK+ +A   FVG A+VDMY+  G + +A++  + M     +V+WN
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWN 498

Query: 391 AQIAGFFRNQKTEEAIEAFSQM----VRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
             I  + +++   EA + F +M    + +D AC     +S LKAC+ +  L   +Q+H  
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC----LASTLKACTHVHGLYQGKQVHCL 554

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            VK   + ++H GSSLI+ Y+KCG  +DA +VFS L    VVS N++I  YSQN    +A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSAC----------------SHSGLVQDGQKVFESMVK 550
           ++LF++M+  G+ P+  TF  ++ AC                +  G   +G+ +  S++ 
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673

Query: 551 EY----GILPEEAHYS------------CMVDLLGRAGKLEIALIFISNL---PIKPTAP 591
            Y    G+    A +S             M+    + G  E AL F   +    + P   
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +  +   C   S L+    I   I  L  D D     TL +MYA+ G    + +    M
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           + +        S +  +N +   +++N    +  K+++ ++Q
Sbjct: 794 RRR--------SNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 228/466 (48%), Gaps = 5/466 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG   HA   K  +  + +V +SLV+MY+KC  +++   V + +   +    N ++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N    +    F+ +       + +T++++L+ C +   ++ G Q H+  +K +    
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY KCG +EDA  +FE +  R+ ++W  II  + Q  +  +   L   M  
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            GI  +       L +C  +   + G   H   +K G+      G++++DMYS  G I +
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+K    +    S VS NA IAG+ +N   EEA+  F +M+       E T+++I++AC 
Sbjct: 583 ARKVFSSL-PEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACH 640

Query: 433 LLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSW 490
              SL    Q H +I K  F S   ++G SL+  Y       +A  +FS+L++   +V W
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             M+  +SQNG   +A+  +++M  +G+ P  +TF+ VL  CS    +++G+ +  S++ 
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-HSLIF 759

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
                 +E   + ++D+  + G ++ +      +  +     W  L
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 208/447 (46%), Gaps = 42/447 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLL 190
           L +G+  H+      +  +  +  ++V++YAKC  +       KQ  +L  D+ + N +L
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVS---YAEKQFDFLEKDVTAWNSML 132

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           + Y+      +    F+ L    + PN +T+S +L+ C   + ++ G+Q+H   +K+   
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
             +    AL+ MY KC  + DA  VFE +V  N + WT + +G+ + G  E+ + +   M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           R++G  P+   F                                     +++ Y  LG++
Sbjct: 253 RDEGHRPDHLAF-----------------------------------VTVINTYIRLGKL 277

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            +A+    EM  S   V+WN  I+G  +      AIE F  M ++       T  S+L A
Sbjct: 278 KDARLLFGEM-SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
             ++ +L     +H+  +K    SN++VGSSL+  Y+KC   E A +VF  L   + V W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N+MI+ Y+ NG + K + LF  M   G    + TF ++LS C+ S  ++ G + F S++ 
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIII 455

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +  +       + +VD+  + G LE A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDA 482



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 37/299 (12%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+  GK +H++++ L   S+  + NA++ +Y KC  +  AE  F+  ++++V +W ++++
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +   G   K LR    + E+ I PN++TF++ L++CA   N   G   H  +IK G+  
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             + G A+VDMY+    I +A++   E     ++V W    +G+ +    EEA+  F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVF-EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  D   + ++                                   I  Y + G  
Sbjct: 253 RDEGHRPDHLAFVTV-----------------------------------INTYIRLGKL 277

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           +DA  +F ++++ DVV+WN MI  + + G    AI  F  M    ++ T ST  +VLSA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 174/371 (46%), Gaps = 20/371 (5%)

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H++ +  G+     +G AIVD+Y+   ++  A+KQ   + K  ++  WN+ ++ +
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA--WNSMLSMY 135

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
               K  + + +F  +  N    ++FT+S +L  C+   ++    QIH  ++K   E N 
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           + G +L++ Y KC    DA RVF  +   + V W  +   Y + G   +A+++FE+M  E
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G RP +  F+ V++     G ++D + +F  M       P+   ++ M+   G+ G   +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETV 310

Query: 577 ALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSN 632
           A+ +  N+    +K T      + +A    ++L +   +  + ++L    +  V  +L +
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MY++       E+     K+ E  +E    +   +N + R ++ N    ++ +++  +K 
Sbjct: 371 MYSK------CEKMEAAAKVFEALEEKNDVF---WNAMIRGYAHNGESHKVMELFMDMKS 421

Query: 693 LMQQIEDIGHT 703
               I+D   T
Sbjct: 422 SGYNIDDFTFT 432


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 202/629 (32%), Positives = 333/629 (52%), Gaps = 46/629 (7%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQP 216
            + +Y+  GD++    +  ++P  D+ +   L++   K+    +A  ++      + V+P
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +     ++   C SL  +   K++H   ++  + S   + NAL+ MY KC   E A  VF
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           EG+  R+VISWT++ + +   G   + L     M  +G  PN  T +  L +C  L++  
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI-----------------W-------- 371
            G   H  V++ GM    FV +A+V+MY+    I                 W        
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 372 ---EAKKQLKEMGKSASS------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
              E +K L   G+  S        SWNA I G  +N +TE+A+E  S+M  +    ++ 
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L AC+ L SL   +QIH  I +  F  ++   ++L+  Y KCG  E + RVFS +
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           T  D VSWN+MI A S +G   +A++LF +MV  G+RP + TF  VLS CSHS LV +G 
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
            +F+SM +++ + P+  H+SCMVD+L RAG+LE A  FI  +PI+PTA  W  L   CR 
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + ++++    + ++ E++ D+   YV LSN+   A L ++A E RKLM+ + ++K PGCS
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           WI+V N+++ F   +KS+ +  ++Y  L  + +++   G+  N           EKE+ +
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSE+LAV FG+++L  ++     + L 
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLR 645



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 185/452 (40%), Gaps = 69/452 (15%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  ++ V   C+    +   +R H    +   C D  +  +L++MY KC   +    V 
Sbjct: 77  DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + MP+ D+ S   + + Y    L  +A   F K+     +PN  T S++L  C  L  + 
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI---------- 285
            G+++H   ++        VS+AL+ MY  C  +  A+ VF+ + +R+ +          
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 286 -------------------------SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
                                    SW A+I G  Q+G  EK L ++  M+  G  PN+ 
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T T  L +C +L +   G   H  + +          TA+V MY+  G++ E  +++  M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDL-ELSRRVFSM 375

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                +VSWN  I     +   EEA+  F +MV +    +  T++ +L  CS        
Sbjct: 376 MTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS-------- 427

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
              HSR+V          G  + ++ ++  S E            D    + M+   S+ 
Sbjct: 428 ---HSRLVDE--------GLLIFDSMSRDHSVE-----------PDADHHSCMVDVLSRA 465

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           GR  +A    +KM +E   PT   + A+L  C
Sbjct: 466 GRLEEAYEFIKKMPIE---PTAGAWGALLGGC 494



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 86/184 (46%), Gaps = 2/184 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL  C+  E L  G++ H  I +     D   T +LV MYAKCGD++    V   M 
Sbjct: 318 ITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMT 377

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  S N ++   + +   ++A   F ++    V+PN  T++ +L+ C     +DEG  
Sbjct: 378 KRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLL 437

Query: 240 LHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
           +     +   +   A  ++ ++ +  + G +E+A    + + ++    +W A++ G + +
Sbjct: 438 IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVY 497

Query: 298 GDYE 301
            + E
Sbjct: 498 KNVE 501



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           H+    I+ Y+  G  + A  +F ++   D+ +W  +I A +++GR+ +AI  +     +
Sbjct: 12  HLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHK 71

Query: 517 G-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P     L+V  AC+    V + ++V E  ++ +G   +    + ++D+ G+    E
Sbjct: 72  NCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIR-FGFCSDVLLGNALIDMYGKCRCSE 130

Query: 576 IALIFISNLPIK 587
            A +    +P +
Sbjct: 131 GARLVFEGMPFR 142


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 205/621 (33%), Positives = 328/621 (52%), Gaps = 17/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L  GR  HA      +  D FV+ +L+++Y +C        V  +MP  D
Sbjct: 105 VLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + + N +LAGYA + ++  A +  L + D   ++PN  T  ++L +     A+ +G  +H
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224

Query: 242 AQTMKL---QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           A  ++    Q   +  +  ALL MY KC  +  A  VF G+  RN ++W+A+I GF    
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCD 284

Query: 299 DYEKPLRLVCLMREDGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
              +   L   M  +G+   +  +   AL  CASL +  MG   HA + K G+      G
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++ MY+  G I EA     E+     ++S+ A ++G+ +N K EEA   F +M   + 
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIK-DTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S++ ACS L +L      H  ++         + +SLI+ Y KCG  + + +
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++ A D+VSWN+MI  Y  +G  ++A  LF  M  +G  P + TF+ +++ACSHSGL
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G+  F++M  +YGILP   HY CMVDLL R G L+ A  FI ++P+K    +W  L 
Sbjct: 524 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H ++ + + +S+ I +L P+    +V LSN+++ AG   +A E R + K+K   K
Sbjct: 584 GACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 643

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---------- 707
            PGCSWIE+   ++ F   ++SH   P +Y +L  ++  I+ +G+  +            
Sbjct: 644 SPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDLEEEE 703

Query: 708 -EDRVLYHSERLAVGFGLISL 727
            E  +LYHSE+LA+ FG++SL
Sbjct: 704 KEKALLYHSEKLAIAFGVLSL 724



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 229/487 (47%), Gaps = 11/487 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  ++P  D  + N L+  Y+    F  A   +  +    V PN YT+  +L  C +L+ 
Sbjct: 55  VFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALAD 114

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G+ +HA    +   +   VS AL+ +YI+C     A +VF  +  R+V++W A++ G
Sbjct: 115 LCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAG 174

Query: 294 FKQHGDYEKPL-RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           +  HG Y   +  L+ +    G+ PN  T    L   A       G   HA  ++  +  
Sbjct: 175 YANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQ 234

Query: 353 GD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +    +GTA++DMY+    +  A +    M    + V+W+A I GF    +  EA   F
Sbjct: 235 NEEQVLIGTALLDMYAKCKHLVYACRVFHGM-TVRNEVTWSALIGGFVLCDRMTEAFNLF 293

Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             M V         + +S L+ C+ L  L    Q+H+ + KS   +++  G+SL+  Y K
Sbjct: 294 KDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAK 353

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G   +A  +F ++   D +S+ +++  Y QNG+A +A ++F+KM    ++P  +T +++
Sbjct: 354 AGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSL 413

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           + ACSH   +Q G+    S++   G+  E +  + ++D+  + G+++++      +P + 
Sbjct: 414 IPACSHLAALQHGRCSHGSVIIR-GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARD 472

Query: 589 TAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
               W  + A    H   K A   F+S +    +PDD   ++ L    + +GL  + +  
Sbjct: 473 IVS-WNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD-VTFICLIAACSHSGLVTEGKHW 530

Query: 647 RKLMKMK 653
              M  K
Sbjct: 531 FDTMTHK 537



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 146/301 (48%), Gaps = 12/301 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V   L  C+    L +G + HAL+ K+ +  D     SL++MYAK G I     +  ++ 
Sbjct: 309 VASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA 368

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  S   LL+GY +N   ++AF  F K+   +VQP+  T  +++  C  L+A+  G+ 
Sbjct: 369 IKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRC 428

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
            H   +      +T++ N+L+ MY KCG ++ +  VF+ +  R+++SW  +I G+  HG 
Sbjct: 429 SHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGL 488

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALG 353
            ++   L   M+  G +P++ TF   +A+C     SH G      + F     K G+   
Sbjct: 489 GKEATTLFLSMKNQGFEPDDVTFICLIAAC-----SHSGLVTEGKHWFDTMTHKYGILPR 543

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                 +VD+ +  G + EA + ++ M   A    W A + G  R  K  +  +  S+M+
Sbjct: 544 MEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGA-LLGACRIHKNIDLGKQVSRMI 602

Query: 414 R 414
           +
Sbjct: 603 Q 603



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 155/335 (46%), Gaps = 7/335 (2%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  +I  G +  A  VF+ +   +  ++ A+I  +   G +   + L   M    + PN+
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           YTF   L +C++L +   G   HA     G+    FV TA++D+Y        A     +
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLA 438
           M      V+WNA +AG+  +     AI     M  R     +  T  S+L   +   +L 
Sbjct: 160 M-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218

Query: 439 TCEQIHSRIVKSKFESN---VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
               +H+  +++  + N   V +G++L++ Y KC     A RVF  +T  + V+W+++I 
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIG 278

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVKEYGI 554
            +    R  +A  LF+ M+VEG+   ++T +A  L  C+    ++ G ++  +++ + GI
Sbjct: 279 GFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQL-HALLAKSGI 337

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
             +    + ++ +  +AG +  A +    + IK T
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDT 372


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 207/630 (32%), Positives = 329/630 (52%), Gaps = 43/630 (6%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF-SFFLKLDG 211
           F   +L+  Y+K G +  M    +++P  D  + N L+ GY+ + L   A  ++   +  
Sbjct: 70  FSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMKD 129

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
                   T  TML +  S   +  GKQ+H Q +KL + S   V + LL MY K G + D
Sbjct: 130 FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISD 189

Query: 272 AESVFEGLVQRNVI------------------------------SWTAIINGFKQHGDYE 301
           A+ VF GL  RN +                              SW+A+I G  Q+G  +
Sbjct: 190 AKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + +     M+ +G+  ++Y F   L +C  L   + G   HA +I+  +    +VG+A++
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY     +  AK     M K  + VSW A + G+ +  +  EA++ F  M R+    D 
Sbjct: 310 DMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDH 368

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           +T    + AC+ + SL    Q H + + +     + V +SL+  Y KCG  +D+ R+F++
Sbjct: 369 YTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNE 428

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D VSW +M+ AY+Q GRA +AI LF+KMV  G++P   T   V+SACS +GLV+ G
Sbjct: 429 MNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKG 488

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           Q+ FE M+ EYGI+P   HYSCM+DL  R+G++E A+ FI+ +P +P A  W  L +ACR
Sbjct: 489 QRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR 548

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              +L++ ++ ++ ++ELDP   A Y  LS++YA  G      + R+ MK K + KEPG 
Sbjct: 549 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQ 608

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG--------HTDNEKEDRVLY 713
           SWI+   K++ F + ++S     ++Y KL++L Q+I D G        H D E+  ++  
Sbjct: 609 SWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKM 668

Query: 714 ---HSERLAVGFGLISLPAKNKFECSRTLE 740
              HSERLA+ FGLI +P+       + L 
Sbjct: 669 LNCHSERLAIAFGLIFVPSGLPIRVGKNLR 698



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 138/274 (50%), Gaps = 3/274 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     +  GR+ HA I +T +    +V ++L++MY KC  +     V  +M   +
Sbjct: 273 VLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 332

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++ GY +     +A   FL +    + P+HYT    ++ C ++S+++EG Q H 
Sbjct: 333 VVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHG 392

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + +    +    VSN+L+T+Y KCG ++D+  +F  +  R+ +SWTA+++ + Q G   +
Sbjct: 393 KAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVE 452

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            ++L   M + G+ P+  T T  +++C  A L      Y F   + + G+   +   + +
Sbjct: 453 AIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRY-FELMINEYGIVPSNGHYSCM 511

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +D++S  G I EA   +  M     ++ W   ++
Sbjct: 512 IDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 4/183 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           + +S C+    LE G ++H       +     V+ SLV +Y KCGDI     +  +M   
Sbjct: 373 QAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVR 432

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D  S   +++ YA+     +A   F K+  + ++P+  T + +++ C     +++G Q +
Sbjct: 433 DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKG-QRY 491

Query: 242 AQTMKLQY--LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHG 298
            + M  +Y  +      + ++ ++ + G +E+A     G+  R + I WT +++  +  G
Sbjct: 492 FELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKG 551

Query: 299 DYE 301
           + E
Sbjct: 552 NLE 554



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 28/275 (10%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           YS+ +K C  L +    + IH  I+++       + ++++ AY    S   A RVF  + 
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
             ++ SWN+++ AYS++G   +    FEK+   +G+     T+  ++   S SGLV    
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGV-----TWNVLIEGYSLSGLVGAAV 120

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF---ISNLPIKPTAPIWRPL--- 596
           K + +M+K++           M+ L    G + +       +  L  +    +  PL   
Sbjct: 121 KAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDM 180

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
           ++   C SD K      K    LD  +  +Y TL       G+  DA +  + M+   +S
Sbjct: 181 YSKVGCISDAK------KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVS 234

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
                     ++ + +  +QN    E  + + ++K
Sbjct: 235 ----------WSAMIKGLAQNGMEKEAIECFREMK 259


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 184/532 (34%), Positives = 304/532 (57%), Gaps = 13/532 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           LD  ++ P    Y   +  C     +D+ +++H      ++     + N+L+ +Y KCG 
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGS 101

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + +A  VF+ + +++++SWT++I G+ Q+    + + L+  M +    PN +TF   L +
Sbjct: 102 VVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
             +  +S +G   HA  +K       +VG+A++DMY+  G++  A     ++  S + VS
Sbjct: 162 AGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVS 220

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I+GF R    E A+  F++M RN      FTYSSI    + + +L   + +H+ +V
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMV 280

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS+ +    VG+++++ Y K GS  DA +VF ++   D+V+WNSM+ A++Q G  ++A+ 
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVS 340

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GI     TFL +L+ACSH GLV++G+  F+ M+KEY + PE  HY  +VDLL
Sbjct: 341 HFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLL 399

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL+FI  +P++PTA +W  L AACR H + K+ +F +  + +LDPDD+   V
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPV 459

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G    A   RK+MK   + KEP CSW+E+ N ++ F + + +H    ++Y+
Sbjct: 460 LLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYK 519

Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLPA 729
              ++  +I   G          H D  E+E  + YHSE++A+ F LI +PA
Sbjct: 520 MWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPA 571



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 203/419 (48%), Gaps = 35/419 (8%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C++ + L+  R+ H  +  +   GD F+  SL+++Y KCG +     V  +M   D+
Sbjct: 58  ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+AGYA+N +  +A      +     +PN +T++++L   G+ +    G Q+HA 
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHAL 177

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I+GF + GD E  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L +   M+ +G +   +T++   +  A +     G   HA ++K    L  FVG  ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDM 297

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +A+K  + +  +   V+WN+ +  F +    +EA+  F +M ++    ++ T
Sbjct: 298 YAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQIT 356

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  IL ACS           H  +VK   E   +    +I+ YN                
Sbjct: 357 FLCILTACS-----------HGGLVK---EGKHYF--DMIKEYN---------------L 385

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
             ++  + +++    + G    A++   KM +E   PT + + A+L+AC      + GQ
Sbjct: 386 EPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME---PTAAVWGALLAACRMHKNAKVGQ 441


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 207/614 (33%), Positives = 328/614 (53%), Gaps = 13/614 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CSR   L  GR  HAL     +    FV+ SLV+MY+KCG++     V       D  S 
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS--AIDEGKQLHAQT 244
           N L++GY +    ++    F  +    +  N +   +++  C       +D  + +H   
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY---- 300
           +K    S   + +A++ MY K G + +A ++F  + + NV+ +  +I GF +        
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298

Query: 301 --EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L L   ++  G+ P E+TF+  L +C        G   H QVIK      DF+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+Y   G + +  +  +   K    V+W A ++G  +N+  E+A+  F + +     
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKH-DIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT SS++ AC+ L      EQI     KS F+    +G+S +  Y + G  + A R 
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++ + DVVSW+++I  ++Q+G AR A+  F++MV   + P   TFL VL+ACSH GLV
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLV 537

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G + +E+M K+YG+ P   H +C+VDLLGRAG+L  A  FISN        IWR L A
Sbjct: 538 DEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLA 597

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H DL+  + ++ +I+EL+P  +A YV L NMY +AG  + A + R LMK + + KE
Sbjct: 598 SCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDR----VLYH 714
           PG SWIE+   ++ F + +KSH E   +Y KL++++ +IE +  TD E   R    +  H
Sbjct: 658 PGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEISKREQNLMNCH 717

Query: 715 SERLAVGFGLISLP 728
           SE+LAV  G+I LP
Sbjct: 718 SEKLAVALGMIHLP 731



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 203/400 (50%), Gaps = 9/400 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+  +L+  Y + G       ++ +MP  +  S N L+  Y++  L   +     +    
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  + ++Y+  LA C     +  G+ +HA  +     S   VSN+L++MY KCG M +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+   +R+ +SW ++++G+ + G  E+ +R+  +MR  G+  N +     +  C+  
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 333 RNSHM--GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            +  M      H  VIK G+    F+ +A++DMY+  G + EA    + + +  + V +N
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV-QEPNVVMFN 282

Query: 391 AQIAGFFRNQKT------EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             IAGF R +         EA+  +S++        EFT+SS+L+AC+L   L   +QIH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
            +++K  F+ +  +GS+LI+ Y   G  ED  R F      D+V+W +M+    QN    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           KA+ LF + +  G++P   T  +V++AC+   + + G+++
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 184/532 (34%), Positives = 305/532 (57%), Gaps = 13/532 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           LD  ++ P    Y   +  C     +D+ +++HA     ++     + N+L+ +Y KCG 
Sbjct: 42  LDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGS 101

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + +A  VF+ +  ++++SWT++I G+ Q+    + + L+  M +    PN +TF   L +
Sbjct: 102 VVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA 161

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
             +  +S +G   HA  +K       +VG+A++DMY+  G++  A     ++  S + VS
Sbjct: 162 VGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVS 220

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I+GF R    E A+  F++M RN      FTYSSI  A + + +L   + +H+ ++
Sbjct: 221 WNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMI 280

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS+ +    VG+++++ Y K GS  DA +VF ++   D+V+WNSM+ A++Q G  ++A+ 
Sbjct: 281 KSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVS 340

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE+M   GI     +FL +L+ACSH GLV++G+  F+ M+KEY + PE  HY  +VDLL
Sbjct: 341 HFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLL 399

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L  AL+FI  +P++PTA +W  L AACR H + K+ +F +  + +LDPDD+   V
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPV 459

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G    A   RK+MK   + KEP CSW+E+ N ++ F + + +H    ++Y+
Sbjct: 460 LLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYK 519

Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLPA 729
              ++  +I   G          H D  E+E  + YHSE++A+ F LI +PA
Sbjct: 520 MWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPA 571



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 205/419 (48%), Gaps = 35/419 (8%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C++ + L+  R+ HA +  +   GD F+  SL+++Y KCG +     V  +M   D+
Sbjct: 58  ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+AGYA+N +  +A      +     +PN +T++++L   G+ +    G Q+HA 
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHAL 177

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I+GF + GD E  
Sbjct: 178 AVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETA 237

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L +   M+ +G +   +T++   ++ A +     G   HA +IK    L  FVG  ++DM
Sbjct: 238 LMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDM 297

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +A+K  + +  +   V+WN+ +  F +    +EA+  F +M ++    ++ +
Sbjct: 298 YAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQIS 356

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  IL ACS           H  +VK   E   +    +I+ YN                
Sbjct: 357 FLCILTACS-----------HGGLVK---EGKHYF--DMIKEYN---------------L 385

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
             ++  + +++    + G    A++   KM +E   PT + + A+L+AC      + GQ
Sbjct: 386 EPEIEHYVTVVDLLGRAGLLNYALVFIFKMPME---PTAAVWGALLAACRMHKNAKVGQ 441


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 193/523 (36%), Positives = 308/523 (58%), Gaps = 22/523 (4%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+ +L  C +  A+ EG+++HA  +K  YL    +S  L+ +Y KC  +  A  VF+ + 
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RNV+SWTA+I+G+ Q G   + L L   M     +PNE+TF   L+SC       +G  
Sbjct: 73  ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H+ + KR      FVG++++DMY+  G I EA+    E       VS  A I+G+ +  
Sbjct: 133 IHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVF-ECLPERDVVSCTAIISGYAQLG 191

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             EEA+E F ++ R   + +  TY+S+L A S L +L   +Q+HS +++ +    V + +
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IR 519
           SLI+ Y+KCG+   A ++F+ +    V+SWN+M+  YS++G+  + + LF+ M  E  ++
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVK 311

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK-----EYGILPEEAHYSCMVDLLGRAGKL 574
           P + TFLAVLS CSH GL   G ++F+ M+      E GI     HY C++DLLGRAG++
Sbjct: 312 PDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGI----EHYGCVIDLLGRAGRV 367

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           E A   I  +P +PTA IW  L  ACR HS+  + EF+  ++LE++P++A  YV LSN+Y
Sbjct: 368 EEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLY 427

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           A AG   D    R+LM  K + KEPG SWIE+   I+ F++ ++SH    +V+ K+++L+
Sbjct: 428 ASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELL 487

Query: 695 QQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLIS 726
            + ++ G+           D E+++++L  HSE+LA+ FGLIS
Sbjct: 488 VKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLIS 530


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 181/484 (37%), Positives = 292/484 (60%), Gaps = 11/484 (2%)

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           + N +L M++KCGMM DA  +F+ + +RN++SW  II+G    GD+ +  RL   M E+ 
Sbjct: 12  MRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEF 71

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
            D   +TF V + + A L    +G   HA  +K G+    FV  A++DMYS  G I +A+
Sbjct: 72  SDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDAR 131

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              +EM +  ++V WN  IAG+  +  +EEA++ + +M  +    D FT+S I++ C+ L
Sbjct: 132 FVFEEMPEK-TTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARL 190

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            S+   +Q H+ +++  F S++   ++L++ Y+K G  EDA  VF ++ + +V+SWN++I
Sbjct: 191 ASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALI 250

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +GR  +A+ LFE+M+ E + P + TFLAVLSACSHSGL + G ++F+SM ++  I
Sbjct: 251 GGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRI 310

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+CM++L+GR G L+ AL  I   P KPTA +W  L  ACR + + ++ +F ++
Sbjct: 311 KPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFELGKFAAE 370

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++  ++PD    Y+ L N+Y  AG   +A +    +K K +   P CSWIEV  + + F 
Sbjct: 371 KLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFL 430

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---------EDRV-LYHSERLAVGFGL 724
           S +  H +  ++Y+K+ +LM +I   G+  N+K         E+RV LYHSE+LA+ FGL
Sbjct: 431 SGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYHSEKLAIAFGL 490

Query: 725 ISLP 728
           IS P
Sbjct: 491 ISTP 494



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 118/209 (56%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           E + +GR+ HA   K  +  D FV+ +L++MY+KCG I+    V ++MP       N ++
Sbjct: 90  ELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTII 149

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           AGYA +   ++A   + ++    V+ +H+T+S ++ IC  L++++  KQ HA  ++  + 
Sbjct: 150 AGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFG 209

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S    + AL+  Y K G +EDA  VF+ +  +NVISW A+I G+  HG   + + L   M
Sbjct: 210 SDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQM 269

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGY 339
            ++ ++PN  TF   L++C+    S  G+
Sbjct: 270 IQERMNPNHITFLAVLSACSHSGLSERGW 298



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/181 (19%), Positives = 84/181 (46%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C+R   +E  ++ HA + +     D     +LV+ Y+K G I+    V  +M   +
Sbjct: 183 IVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKN 242

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+ GY  +    +A   F ++    + PNH T+  +L+ C      + G ++  
Sbjct: 243 VISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQ 302

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDY 300
              +   +   A+  A ++ +  + G++++A ++  G   +   + W A++   + + ++
Sbjct: 303 SMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENF 362

Query: 301 E 301
           E
Sbjct: 363 E 363



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 4/159 (2%)

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           ++ + FE + ++ + ++  + KCG   DA R+F ++   ++VSWN++I      G   +A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MV 565
             LF  M  E     + TF  ++ A +   L+  G+++    +K  GI  ++   SC ++
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLK-MGI-GDDIFVSCALI 118

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           D+  + G +E A      +P K T   W  + A    H 
Sbjct: 119 DMYSKCGSIEDARFVFEEMPEKTTVG-WNTIIAGYALHG 156


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/611 (32%), Positives = 330/611 (54%), Gaps = 12/611 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K  +    FV  +L++ Y K G + +   V  +M   D  + N ++ G +K  L 
Sbjct: 158 HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLH 217

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            QA   F  +    +   H+T+S++L +   ++ +  G Q+HA  ++   +    V+N+L
Sbjct: 218 TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL 277

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  Y KC  ++D   +F+ + +R+ +S+  II  +  +      LRL   M++ G D   
Sbjct: 278 LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQV 337

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             +   L+   SL + H+G   HAQ++  G+A  D +G A++DMYS  G +  AK     
Sbjct: 338 LPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
             +  S++SW A I G+ +N + EEA++ FS M R     D  T+SSI+KA S L  +  
Sbjct: 398 RSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+HS +++S ++S+V  GS L++ Y KCG  ++A R F ++   + +SWN++I AY+ 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
            G A+ AI +FE M+  G  P + TFL+VL+ACSH+GL  +  K F  M  +Y I P + 
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+C++D LGR G        +  +P K    IW  +  +CR H + ++A   + ++  +
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P DA  YV LSN+YA AG   DA   +K+M+ + + KE G SW+E+  KIY F S + +
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 680 HSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGLISLP 728
              + ++ ++L +L ++++  G+           D+E K + + YHSERLA+ F L++ P
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 729 AKNKFECSRTL 739
           A       + L
Sbjct: 757 AGTPIRIMKNL 767



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 238/462 (51%), Gaps = 20/462 (4%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           +P T ++  S         +L+  +    L LG + HAL+ ++    + FV  SL++ Y+
Sbjct: 232 IPATHFTFSS---------ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KC  +  M  +  +MP  D  S N ++A YA N         F ++  +        Y+T
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ML++ GSL  +  GKQ+HAQ + L   S+  + NAL+ MY KCGM++ A+S F    +++
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            ISWTA+I G+ Q+G +E+ L+L   MR  G+ P+  TF+  + + +SL    +G   H+
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +I+ G     F G+ +VDMY+  G + EA +   EM +  +S+SWNA I+ +    + +
Sbjct: 463 YLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAK 521

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV---HVGS 460
            AI+ F  M+      D  T+ S+L ACS       C + +  ++K ++  +    H  +
Sbjct: 522 NAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSISPWKEHY-A 579

Query: 461 SLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
            +I+   + G +   +++  ++   AD + W S++ +   +G    A +  +K+   G+ 
Sbjct: 580 CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GME 637

Query: 520 PTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPEEAH 560
           PT++T   +LS   + +G  +D   V + ++++ G+  E  +
Sbjct: 638 PTDATPYVILSNIYARAGQWEDAACV-KKIMRDRGVRKESGY 678



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 249/532 (46%), Gaps = 14/532 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y+  GD+ +   +    P+ +  +   ++  +A       A S F  + G  V P+
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             T +T+L + G          LH   +K    +   V N LL  Y K G++  A  VF 
Sbjct: 140 RVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  ++ +++ A++ G  + G + + L+L   MR  GI    +TF+  L   A + +  +
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G+  HA V++    L  FV  +++D YS    + + ++   EM +   +VS+N  IA + 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER-DNVSYNVIIAAYA 313

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
            NQ     +  F +M +         Y+++L     LP +   +QIH+++V     S   
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           +G++LI+ Y+KCG  + A+  FS  +    +SW ++I  Y QNG+  +A+ LF  M   G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +RP  +TF +++ A S   ++  G+++   +++  G        S +VD+  + G L+ A
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEA 492

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA 635
           L     +P + +   W  + +A   + + K A  + + +L    +P D+  ++++    +
Sbjct: 493 LRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP-DSVTFLSVLAACS 550

Query: 636 EAGLQADAEEQRKLMKMK-EIS--KEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             GL  +  +   LMK +  IS  KE     I+   ++  F    K   EMP
Sbjct: 551 HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMP 602



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 8/356 (2%)

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           G  S +  G    A+ M  Q   K   S N +L+ Y   G +  A+ +F     RN  +W
Sbjct: 49  GLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 108

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T ++      G     L L   M  +G+ P+  T T  L        S      H   IK
Sbjct: 109 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-----LHPFAIK 163

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+    FV   ++D Y   G +  A++   EM     +V++NA + G  +     +A++
Sbjct: 164 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQ 222

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F+ M R       FT+SSIL   + +  L    Q+H+ +++S    NV V +SL++ Y+
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC   +D  R+F ++   D VS+N +I AY+ N  A   + LF +M   G       +  
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           +LS       V  G+++   +V   G+  E+   + ++D+  + G L+ A    SN
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/611 (32%), Positives = 330/611 (54%), Gaps = 12/611 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K  +    FV  +L++ Y K G + +   V  +M   D  + N ++ G +K  L 
Sbjct: 158 HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLH 217

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            QA   F  +    +   H+T+S++L +   ++ +  G Q+HA  ++   +    V+N+L
Sbjct: 218 TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL 277

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  Y KC  ++D   +F+ + +R+ +S+  II  +  +      LRL   M++ G D   
Sbjct: 278 LDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQV 337

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             +   L+   SL + H+G   HAQ++  G+A  D +G A++DMYS  G +  AK     
Sbjct: 338 LPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
             +  S++SW A I G+ +N + EEA++ FS M R     D  T+SSI+KA S L  +  
Sbjct: 398 RSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+HS +++S ++S+V  GS L++ Y KCG  ++A R F ++   + +SWN++I AY+ 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
            G A+ AI +FE M+  G  P + TFL+VL+ACSH+GL  +  K F  M  +Y I P + 
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+C++D LGR G        +  +P K    IW  +  +CR H + ++A   + ++  +
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P DA  YV LSN+YA AG   DA   +K+M+ + + KE G SW+E+  KIY F S + +
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 680 HSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGLISLP 728
              + ++ ++L +L ++++  G+           D+E K + + YHSERLA+ F L++ P
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 729 AKNKFECSRTL 739
           A       + L
Sbjct: 757 AGTPIRIMKNL 767



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 238/462 (51%), Gaps = 20/462 (4%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           +P T ++  S         +L+  +    L LG + HAL+ ++    + FV  SL++ Y+
Sbjct: 232 IPATHFTFSS---------ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KC  +  M  +  +MP  D  S N ++A YA N         F ++  +        Y+T
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ML++ GSL  +  GKQ+HAQ + L   S+  + NAL+ MY KCGM++ A+S F    +++
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKS 402

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            ISWTA+I G+ Q+G +E+ L+L   MR  G+ P+  TF+  + + +SL    +G   H+
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +I+ G     F G+ +VDMY+  G + EA +   EM +  +S+SWNA I+ +    + +
Sbjct: 463 YLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER-NSISWNAVISAYAHYGEAK 521

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV---HVGS 460
            AI+ F  M+      D  T+ S+L ACS       C + +  ++K ++  +    H  +
Sbjct: 522 NAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMK-YFHLMKHQYSISPWKEHY-A 579

Query: 461 SLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
            +I+   + G +   +++  ++   AD + W S++ +   +G    A +  +K+   G+ 
Sbjct: 580 CVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GME 637

Query: 520 PTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPEEAH 560
           PT++T   +LS   + +G  +D   V + ++++ G+  E  +
Sbjct: 638 PTDATPYVILSNIYARAGQWEDAACV-KKIMRDRGVRKESGY 678



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 249/532 (46%), Gaps = 14/532 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y+  GD+ +   +    P+ +  +   ++  +A       A S F  + G  V P+
Sbjct: 80  ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 139

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             T +T+L + G          LH   +K    +   V N LL  Y K G++  A  VF 
Sbjct: 140 RVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 194

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  ++ +++ A++ G  + G + + L+L   MR  GI    +TF+  L   A + +  +
Sbjct: 195 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLL 254

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G+  HA V++    L  FV  +++D YS    + + ++   EM +   +VS+N  IA + 
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER-DNVSYNVIIAAYA 313

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
            NQ     +  F +M +         Y+++L     LP +   +QIH+++V     S   
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           +G++LI+ Y+KCG  + A+  FS  +    +SW ++I  Y QNG+  +A+ LF  M   G
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +RP  +TF +++ A S   ++  G+++   +++  G        S +VD+  + G L+ A
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEA 492

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA 635
           L     +P + +   W  + +A   + + K A  + + +L    +P D+  ++++    +
Sbjct: 493 LRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP-DSVTFLSVLAACS 550

Query: 636 EAGLQADAEEQRKLMKMK-EIS--KEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             GL  +  +   LMK +  IS  KE     I+   ++  F    K   EMP
Sbjct: 551 HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMP 602



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 8/356 (2%)

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           G  S +  G    A+ M  Q   K   S N +L+ Y   G +  A+ +F     RN  +W
Sbjct: 49  GLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 108

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T ++      G     L L   M  +G+ P+  T T  L        S      H   IK
Sbjct: 109 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-----LHPFAIK 163

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+    FV   ++D Y   G +  A++   EM     +V++NA + G  +     +A++
Sbjct: 164 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQ 222

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F+ M R       FT+SSIL   + +  L    Q+H+ +++S    NV V +SL++ Y+
Sbjct: 223 LFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYS 282

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC   +D  R+F ++   D VS+N +I AY+ N  A   + LF +M   G       +  
Sbjct: 283 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 342

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           +LS       V  G+++   +V   G+  E+   + ++D+  + G L+ A    SN
Sbjct: 343 MLSVAGSLPDVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 397


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 203/630 (32%), Positives = 334/630 (53%), Gaps = 13/630 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    +E G   H+      +  D FV  +LV+ YAKCG +     +   M + D
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++AG +   L D A    +++    + PN  T   +L   G   A+  GK LH 
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  + +   V   LL MY KC  +  A  +F+ +  RN +SW+A+I G+      ++
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKE 294

Query: 303 PLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            L L   ++ +D +DP   T    L +CA L +   G   H  +IK G  L   +G  ++
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLL 354

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY+  G I +A +   EM     SVS++A ++G  +N     A+  F  M  +    D 
Sbjct: 355 SMYAKCGVIDDAIRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDL 413

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T   +L ACS L +L      H  ++   F ++  + ++LI+ Y+KCG    A  VF++
Sbjct: 414 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 473

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D+VSWN+MI  Y  +G   +A+ LF  ++  G++P + TF+ +LS+CSHSGLV +G
Sbjct: 474 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F++M +++ I+P   H  CMVD+LGRAG ++ A  FI N+P +P   IW  L +ACR
Sbjct: 534 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++ E +SK+I  L P+    +V LSN+Y+ AG   DA   R   K   + K PGC
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SWIE+   ++ F   ++SH ++ ++  KL++L+ +++ +G+            + EKE  
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQI 713

Query: 711 VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +LYHSE+LA+ FG+++L A      ++ L 
Sbjct: 714 LLYHSEKLAIAFGILNLKAGRPILVTKNLR 743



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 227/462 (49%), Gaps = 3/462 (0%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K   + +L  C + + L   ++ H    K     D  V   L  +Y  C  +     +  
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P   +   N ++  YA N  FD A   +  +  + V+PN YTY  +L  C  L AI++
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G ++H+        S   V  AL+  Y KCG++ +A+ +F  +  R+V++W A+I G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G  +  ++L+  M+E+GI PN  T    L +    +    G   H   ++R    G  V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GT ++DMY+    +  A+K    MG   + VSW+A I G+  +   +EA+E F QM+  D
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVASDCMKEALELFDQMILKD 306

Query: 417 AA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           A      T  S+L+AC+ L  L+   ++H  I+K     ++ +G++L+  Y KCG  +DA
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDA 366

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            R F ++   D VS+++++    QNG A  A+ +F  M + GI P  +T L VL ACSH 
Sbjct: 367 IRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHL 426

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             +Q G      ++   G   +    + ++D+  + GK+  A
Sbjct: 427 AALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFA 467



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  CS    L+ G   H  +       D  +  +L++MY+KCG I     V 
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   DI S N ++ GY  + L  +A   F  L  + ++P+  T+  +L+ C     + 
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531

Query: 236 EGK-QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG+    A +     + +      ++ +  + G++++A      +  + +V  W+A+++ 
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591

Query: 294 FKQHGDYE 301
            + H + E
Sbjct: 592 CRIHKNIE 599


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 193/593 (32%), Positives = 331/593 (55%), Gaps = 8/593 (1%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    L+LG++ H L  K     D ++  +L+NMY+  G ++S   + + +P  D    
Sbjct: 265 CAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLW 324

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAIDEGKQLHAQTM 245
           N +++ YA     ++A   F+++    V+ +  T   ML++C  L S + +GK LHA  +
Sbjct: 325 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 384

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           K       ++ NALL+MY +   +E  + +F+ +   ++ISW  +I    ++    +   
Sbjct: 385 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 444

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   MRE  I PN YT    LA+C  +     G   H  V+K  + +   + TA+ DMY 
Sbjct: 445 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 504

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G+   A+  L E       +SWNA IA + +N +  +A+  F +M+ ++A  +  T  
Sbjct: 505 NCGDEATAR-DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTII 562

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFES--NVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++L + + L +L   + +H+ + +  F    ++ + ++ I  Y +CGS + AE +F  L 
Sbjct: 563 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +++SWN+MI  Y  NGR   A++ F +M+ +G RP   TF++VLSACSHSG ++ G +
Sbjct: 623 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SMV+++ + PE  HYSC+VDLL R G ++ A  FI ++PI+P A +WR L ++CR +
Sbjct: 683 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 742

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
           SD K A+ I +++ +L+P +A  YV LSN+YA AGL  +    R  +K K + K PG SW
Sbjct: 743 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 802

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSE 716
           I V N+++ F + ++SH +  K+Y KL  L+  + + G+   + + R ++H E
Sbjct: 803 IIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGY---DPDLRWVFHEE 852



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/534 (25%), Positives = 248/534 (46%), Gaps = 13/534 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAV 174
           + + ++ +L  C     L LGR  H    +  +   +  V  +L+  Y +  D++ +  +
Sbjct: 153 NSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLL 211

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   +I S N +++GY     + +A   F+++   +V+ +  T    +  C  L ++
Sbjct: 212 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 271

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GKQ+H   +K +++    + NALL MY   G +E +  +FE +  R+   W ++I+ +
Sbjct: 272 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 331

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM-GYMFHAQVIKRGMALG 353
              G +E+ + L   M+ +G+  +E T  + L+ C  L +  + G   HA VIK GM + 
Sbjct: 332 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRID 391

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +G A++ MY+ L  +   +K    M K    +SWN  I    RN    +A E F +M 
Sbjct: 392 ASLGNALLSMYTELNCVESVQKIFDRM-KGVDIISWNTMILALARNTLRAQACELFERMR 450

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            ++   + +T  SIL AC  +  L     IH  ++K   E N  + ++L + Y  CG   
Sbjct: 451 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 510

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A  +F      D++SWN+MI +Y +N +A KA++LF +M+ E   P + T + VLS+ +
Sbjct: 511 TARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFT 569

Query: 534 HSGLVQDGQKVFESMVKE-YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           H   +  GQ +   + +  + +  + +  +  + +  R G L+ A      LP K     
Sbjct: 570 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIIS 628

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS----NMYAEAGLQ 640
           W  + A    +     A     Q+LE    P+       LS    + + E GLQ
Sbjct: 629 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 682



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 242/520 (46%), Gaps = 7/520 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+ +  +E G+  H  I  T +  D  V  ++V+ Y KCG ++    V   M   D
Sbjct: 59  VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRD 118

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N ++ GY     +++A     ++   +++PN  T   +L  C   S +  G+ +H 
Sbjct: 119 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 178

Query: 243 QTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++   + S   V+ AL+  Y++   M     +F+ +V RN++SW A+I+G+   GDY 
Sbjct: 179 YCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYF 237

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K L L   M  D +  +  T  VA+ +CA L +  +G   H   IK       ++  A++
Sbjct: 238 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 297

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G + E+  QL E   +  +  WN+ I+ +      EEA++ F +M       DE
Sbjct: 298 NMYSNNGSL-ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 356

Query: 422 FTYSSILKACSLLPS-LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            T   +L  C  L S L   + +H+ ++KS    +  +G++L+  Y +    E  +++F 
Sbjct: 357 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 416

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D++SWN+MI A ++N    +A  LFE+M    I+P + T +++L+AC     +  
Sbjct: 417 RMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDF 476

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA- 599
           G+ +    V ++ I   +   + + D+    G    A       P +     W  + A+ 
Sbjct: 477 GRSI-HGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLIS-WNAMIASY 534

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            + +   K      + I E +P+   +   LS+    A L
Sbjct: 535 VKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATL 574



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 200 DQA-FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           DQA  S + +++ + V PN+ T   +L  C + +A++ GK +H        +    V  A
Sbjct: 34  DQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTA 93

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           ++  Y KCG +EDA  VF+ +  R+V+ W A++ G+   G YE+ + LV  M  + + PN
Sbjct: 94  VVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPN 153

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQL 377
             T    L +C       +G   H   ++ GM   +  V TA++  Y  L         L
Sbjct: 154 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY--LRFDMRVLPLL 211

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++    + VSWNA I+G++      +A+E F QM+ ++   D  T    ++AC+ L SL
Sbjct: 212 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 271

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +QIH   +K +F  ++++ ++L+  Y+  GS E + ++F  +   D   WNSMI AY
Sbjct: 272 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 331

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH--SGLVQDGQKVFESMVK 550
           +  G   +A+ LF +M  EG++    T + +LS C    SGL++ G+ +   ++K
Sbjct: 332 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIK 385



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 2/157 (1%)

Query: 389 WNAQIAGFFRNQKTEEAI-EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           WN+ I     N K ++AI  A++QM       +  T   +LKAC+   ++   + IH  I
Sbjct: 21  WNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 79

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
             +    +V VG+++++ Y KCG  EDA  VF  ++  DVV WN+M+  Y   G   +A+
Sbjct: 80  QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 139

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           +L  +M  E +RP + T +A+L AC  +  ++ G+ V
Sbjct: 140 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGV 176


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 198/578 (34%), Positives = 316/578 (54%), Gaps = 3/578 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS  +   LG + H  + K+    + FV  SL+ MY K G       V   M + D
Sbjct: 174 ILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKD 233

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I   N ++  Y +     +A   F  L     +P  YT++ +++ C     ++EGKQL  
Sbjct: 234 IRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQG 293

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  +LS+T+V NA++TMY   GM ++AE +F  + ++N+ISWTA+I+G+ + G  +K
Sbjct: 294 LAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKK 353

Query: 303 PLR-LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            +   + L  E GI+ +    T  L  C+   N  +G   H  V+K G A    V TA+V
Sbjct: 354 AVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALV 413

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE-AIEAFSQMVRNDAACD 420
           D+Y+   ++  A+     +     + S+NA +AGF  +   EE  +  F+Q+       D
Sbjct: 414 DLYAKCEKLQSARIVFDHLSNKGIA-SFNAILAGFLESSGDEEDPMILFNQLRLAGVKPD 472

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T+S +L   +   SL      H+  VK+ F++N+ V +S+I  Y KCGS EDA ++F+
Sbjct: 473 MVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFN 532

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D +SWN++I AY+ +G+A+K++ LFE+M  +G  P   T LA+L AC++SGL +D
Sbjct: 533 IMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKD 592

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G  +F  M  +YGI P   HY+CM DLLGRAG L  A+  I   P   +  +WR L   C
Sbjct: 593 GICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVC 652

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           + H +L   +  SK +L+L P +A  Y+ +SNMYA   +  +A + RK+M   +  KE G
Sbjct: 653 KLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAG 712

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            SWIE+ NK++ F + +K H E  ++Y +L+ L  +++
Sbjct: 713 SSWIEIDNKVHHFVASDKDHPESREIYTRLELLTDEMK 750



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/500 (23%), Positives = 228/500 (45%), Gaps = 7/500 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG+  H+ + K     D F   +++N+Y K   +     V  +M   +  +   L+ GY 
Sbjct: 85  LGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYL 144

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++  F  AFS    +       N +T + +L  C S      G+Q+H   +K  +     
Sbjct: 145 EDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V  +L+ MY K G  + AE VF+ +  +++     +I  + + G+  K + +   +  DG
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
            +P +YTFT  +++C        G        K G      VG AI+ MY   G   EA+
Sbjct: 265 FEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAE 324

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-DAACDEFTYSSILKACSL 433
           +    M +  + +SW A I+G+ R+   ++A++AF  +        D    ++IL  CS 
Sbjct: 325 RMFSSMSEK-NLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSD 383

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             +L    QIH  ++K     +V+V ++L++ Y KC   + A  VF  L+   + S+N++
Sbjct: 384 CNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAI 443

Query: 494 IKAYSQ-NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +  + + +G     +ILF ++ + G++P   TF  +LS  ++   ++ G+  F +   + 
Sbjct: 444 LAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRS-FHAYTVKT 502

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G     +  + ++ +  + G +E A    + +  + +   W  L +A   H   + + F+
Sbjct: 503 GFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSIS-WNALISAYALHGQAQKSLFL 561

Query: 613 SKQILE--LDPDDAAVYVTL 630
            +++     DPD+  +   L
Sbjct: 562 FEEMKRKGFDPDEFTILAIL 581



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 27/261 (10%)

Query: 78  GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGR 137
           G SR+GY  +     D F+  G  + + +         D   +  +L  CS    LELG 
Sbjct: 344 GYSRSGYGKKA---VDAFL--GLHDELGIN-------FDSTLLTAILDCCSDCNNLELGL 391

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           + H  + K     D  V  +LV++YAKC  ++S   V   +    IAS N +LAG+ +++
Sbjct: 392 QIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESS 451

Query: 198 --------LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
                   LF+Q     L+L G  V+P+  T+S +L++  + +++++G+  HA T+K  +
Sbjct: 452 GDEEDPMILFNQ-----LRLAG--VKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGF 504

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            +  +V+N++++MY KCG +EDA  +F  +  R+ ISW A+I+ +  HG  +K L L   
Sbjct: 505 DTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEE 564

Query: 310 MREDGIDPNEYTFTVALASCA 330
           M+  G DP+E+T    L +C 
Sbjct: 565 MKRKGFDPDEFTILAILQACT 585



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 127/240 (52%), Gaps = 2/240 (0%)

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
           R+  +G   H+ ++K G     F G  ++++Y     +  A+K    M ++ ++++W + 
Sbjct: 81  RDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRM-RTRNTITWTSL 139

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I G+  +   + A      M +     +E T + IL+ACS        EQIH  ++KS F
Sbjct: 140 IKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGF 199

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           + NV VG+SLI  Y K G ++ AE+VF  +   D+   N MI  Y + G   KAI +F+ 
Sbjct: 200 DENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKN 259

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           ++ +G  PT+ TF  ++S C+    V++G+++ + +  +YG L E +  + ++ + G +G
Sbjct: 260 LLNDGFEPTDYTFTNIISTCNGDLGVEEGKQL-QGLAFKYGFLSETSVGNAIITMYGNSG 318


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 192/582 (32%), Positives = 330/582 (56%), Gaps = 11/582 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L +C++ +    G   HA   KT +  D  V+  ++N+Y+KCG++     +  +M   +
Sbjct: 9   LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + +++GY +      A + F ++    + PN Y ++++++ C SL+A+ +G Q+HA
Sbjct: 69  LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q++KL  +S + VSNAL++MY+KCG+  DA  V   + + N +S+ A+I GF ++   EK
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +MR+ G  P+ +TF+  L  C S  +   G   H Q+IK  +    F+G  I+ 
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--- 419
           MYS    I EA+K    + K    +SWN  +      +  E A+  F  M+     C   
Sbjct: 246 MYSKFNLIEEAEKVFGLI-KEKDLISWNTLVTACCFCKDHERALRVFRDMLD---VCFVK 301

Query: 420 -DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+FT++ +L AC+ L S+   +QIH  +++++   +V V ++L+  Y KCGS +++  V
Sbjct: 302 PDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDV 361

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F + +  ++VSWN++I A+  +G   +A+  FEKM   GI P + TF+ +L+AC+H+GLV
Sbjct: 362 FRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLV 421

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++GQ  F SM + YGI P   H+SC++DLLGRAG+L+ A  ++  LP      I   L +
Sbjct: 422 EEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLS 481

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H D+ + E ++ Q+L+L P   + YV LSN+YA   +     E  K++K   + KE
Sbjct: 482 ACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKE 541

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
           PG S I+V     +F   + SHS + ++ + +K L   + ++
Sbjct: 542 PGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWTVSEV 583



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 179/330 (54%), Gaps = 5/330 (1%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
            ++L  C  + A   G  LHA  +K   LS   VSN ++ +Y KCG +  A  +F+ +  
Sbjct: 7   GSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSD 66

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           RN++SW+AII+G+ Q G   +PL  + L  +  I PNEY F   +++CASL     G   
Sbjct: 67  RNLVSWSAIISGYDQTG---QPLLALNLFSQMRIVPNEYVFASVISACASLTALSQGLQV 123

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HAQ +K G     FV  A++ MY   G   +A      M +  ++VS+NA IAGF  NQ+
Sbjct: 124 HAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSE-PNAVSYNALIAGFVENQQ 182

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            E+ IEAF  M +   A D FT+S +L  C+         Q+H +++K   E +  +G+ 
Sbjct: 183 PEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNV 242

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV-VEGIRP 520
           +I  Y+K    E+AE+VF  +   D++SWN+++ A        +A+ +F  M+ V  ++P
Sbjct: 243 IITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKP 302

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            + TF  VL+AC+    ++ G+++   +++
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIR 332


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 195/596 (32%), Positives = 330/596 (55%), Gaps = 14/596 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y++ G+I ++     +MP  DI S N L+A Y  N  FD+ + FF  +    + P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
               S  L+ C     I  G+ +    +      ++ V  AL++MY K G   DA SVF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  R+V++W+A++  + ++G   + L L   M  DG+ PN+ T    L +CASL +   
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G + H +V  +G+  G  VGTA+V++Y   G I  A +   ++ +  + V+W+A  A + 
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEK-NVVAWSAISAAYA 239

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR--IVKSKFESN 455
           RN +  +AI    +M       +  T+ S+L AC+ + +L    +IH R  ++    ES+
Sbjct: 240 RNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESD 299

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V+V ++L+  Y+KCG+   A  +F ++   D+V WNS+I   +Q+G+  KA+ LFE+M +
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           EG++PT  TF +VL ACSH+G++  G+K F S + ++GI PE  H+ CMVDLLGRAG + 
Sbjct: 360 EGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            +   + ++P +P    W     ACR + ++  A + ++ + +LDP   A YV LSNMYA
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYA 479

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
           +AG  +D    R+ M++    KE G SWIEV ++++ F S +  H  + +++ +L++L +
Sbjct: 480 KAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTK 539

Query: 696 QIEDIGHT-DNE----------KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +++ G+  D E          KE  V YHSE+LA+ F L++ P  +     + L 
Sbjct: 540 LMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLR 595



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 3/311 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+    + +GR     I  T +  +  V  +LV+MY K G      +V  +M + D+
Sbjct: 68  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDV 127

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + + ++A YA+N    +A   F ++D   V PN  T  + L  C SL  +  G  +H +
Sbjct: 128 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 187

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
                  S   V  AL+ +Y KCG +E A   F  +V++NV++W+AI   + ++      
Sbjct: 188 VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDA 247

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH--AQVIKRGMALGDFVGTAIV 361
           +R++  M  +G+ PN  TF   L +CA++     G   H   QV+  G+    +V TA+V
Sbjct: 248 IRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALV 307

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G +  A     ++      V WN+ IA   ++ +TE+A+E F +M         
Sbjct: 308 NMYSKCGNLALAGDMFDKIAH-LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTI 366

Query: 422 FTYSSILKACS 432
            T++S+L ACS
Sbjct: 367 ITFTSVLFACS 377



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 25/315 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K  ++  L  C+    L  G   H  +    +     V  +LVN+Y KCG I++ V   
Sbjct: 161 NKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAF 220

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            Q+   ++ + + + A YA+N     A     ++D   + PN  T+ ++L  C +++A+ 
Sbjct: 221 GQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALK 280

Query: 236 EGKQLHAQTMKL--QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +G+++H +T  L     S   V  AL+ MY KCG +  A  +F+ +   +++ W ++I  
Sbjct: 281 QGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIAT 340

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA-L 352
             QHG  EK L L   MR +G+ P   TFT  L +C+           HA ++ +G    
Sbjct: 341 NAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACS-----------HAGMLDQGRKHF 389

Query: 353 GDFVGT-----------AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
             F+G             +VD+    G I +++  L  M      V+W A +      + 
Sbjct: 390 VSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRN 449

Query: 402 TEEAIEAFSQMVRND 416
            + AI A   + + D
Sbjct: 450 MDRAIWAAENLFQLD 464


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 202/603 (33%), Positives = 325/603 (53%), Gaps = 13/603 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H  I K+       V  SLV  Y K   + S   V  +M   D+ S N ++ GY  
Sbjct: 214 GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++  S F+++    ++ +  T  ++ A C     I  G+ +H   +K  +  +   
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF 333

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N LL MY KCG ++ A+ VF  +  R+V+S+T++I G+ + G   + ++L   M E+GI
Sbjct: 334 CNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ YT T  L  CA  R    G   H  + +  M    FV  A++DMY+  G + EA+ 
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAEL 453

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLL 434
              EM +    +SWN  I G+ +N    EA+  F+ + V    + DE T + +L AC+ L
Sbjct: 454 VFSEM-RVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +     +IH  I+++ + S+ HV +SL++ Y KCG+   A  +F  +T+ D+VSW  MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMI 572

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +G  ++AI LF +M   GI P   +F+++L ACSHSGLV +G + F  M  E  I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+C+VD+L R G L  A  FI N+PI P A IW  L   CR H D+K+AE +++
Sbjct: 633 EPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAE 692

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ EL+P++   YV ++N+YAEA    + +  RK +  + + K PGCSWIE+  ++  F 
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
           + + S+ E  K+   L+ +  ++ + G++           + EKE+ +  HSE+LA+  G
Sbjct: 753 AGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812

Query: 724 LIS 726
           +IS
Sbjct: 813 IIS 815



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 265/541 (48%), Gaps = 7/541 (1%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N V +   S +  +D + +  VL  C+  + L+ G+     I       D  + + L  M
Sbjct: 79  NAVKLLHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALM 138

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y  CGD+K    V  Q+        N L+   AK+  F  +   F K+    V+ + YT+
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S +     SL +++ G+QLH   +K  +  + +V N+L+  Y+K   ++ A  VF+ + +
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+VISW +IING+  +G  EK L +   M   GI+ +  T     A CA  R   +G   
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAV 318

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   +K   +  D     ++DMYS  G++  AK   +EM    S VS+ + IAG+ R   
Sbjct: 319 HCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM-SGRSVVSYTSMIAGYAREGL 377

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EA++ F +M     + D +T +++L  C+    L   +++H  I ++    ++ V ++
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNA 437

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRP 520
           L++ Y KCGS  +AE VFS++   D++SWN++I  YS+N  A +A+ LF  ++VE    P
Sbjct: 438 LMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP 497

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              T   VL AC+       G+++   +++  G   +    + +VD+  + G L +A + 
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLARLL 556

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAG 638
             ++  K     W  + A    H   K A  +  Q+ +  ++PD+ + +V+L    + +G
Sbjct: 557 FDDITSKDLVS-WTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEIS-FVSLLYACSHSG 614

Query: 639 L 639
           L
Sbjct: 615 L 615



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 146/299 (48%), Gaps = 4/299 (1%)

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+V      +  F + G+ +  ++L+ +  +  IDP   T    L  CA  ++   G  
Sbjct: 58  DRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDIDPR--TLCSVLQLCADSKSLKDGKE 115

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
               +   G  L   +G+ +  MY+  G++ EA +   ++ K   ++ WN  +    ++ 
Sbjct: 116 VDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV-KIEKALFWNILMNELAKSG 174

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
               +I  F +M+ +    D +T+S + K+ S L S+   EQ+H  I+KS F     VG+
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGN 234

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL+  Y K    + A +VF ++T  DV+SWNS+I  Y  NG A K + +F +M+  GI  
Sbjct: 235 SLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEI 294

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             +T ++V + C+ S L+  G+ V    VK      E+   + ++D+  + G L+ A +
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHCFGVKAC-FSREDRFCNTLLDMYSKCGDLDSAKV 352



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 6/216 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D++ V  VL  C+     + GR  H  I +     D+ V  SLV+MYAKCG +     + 
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLF 557

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ S   ++AGY  +    +A + F ++    ++P+  ++ ++L  C     +D
Sbjct: 558 DDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVD 617

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG +     M+ +   +  V +   ++ M  + G +  A    E + +  +   W A++ 
Sbjct: 618 EGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLC 676

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           G + H D +   R+   + E  ++P    + V +A+
Sbjct: 677 GCRIHHDVKLAERVAEKVFE--LEPENTGYYVLMAN 710


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 218/695 (31%), Positives = 356/695 (51%), Gaps = 57/695 (8%)

Query: 98  DGCSNTVPVTCYSLESLLDK--QFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           DG      V C  L +L      +V+  +L+  +R   L L RR    +       + F 
Sbjct: 23  DGARVPGAVHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDP----NLFT 78

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL----- 209
             +L++  A    +  M  +   MP  D  S N L+AG++      +A   +  L     
Sbjct: 79  RNALLSALAHARLLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEA 138

Query: 210 --DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY------------------ 249
             DG  V+P+  T S M+    +L     G+Q+H Q M+L +                  
Sbjct: 139 VVDGARVRPSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMG 198

Query: 250 -------------LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
                        +    + N ++T  ++C M+E+A  VFE +V R+ I+WT ++ G  Q
Sbjct: 199 LIGDAKRVFDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQ 258

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G   + L +   MR +G+  ++YTF   L +C +L  S  G   HA  I+       FV
Sbjct: 259 NGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFV 318

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G+A+VDMYS    I  A+   + M    + +SW A I G+ +N   EEA+  FS+M  + 
Sbjct: 319 GSALVDMYSKCRSIRLAEAVFRRM-TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDG 377

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              ++FT  S++ +C+ L SL    Q H   + S     + V S+L+  Y KCGS EDA 
Sbjct: 378 IKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAH 437

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           R+F ++   D VS+ +++  Y+Q G+A++ I LFEKM+++G++P   TF+ VLSACS SG
Sbjct: 438 RLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSG 497

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV+ G   F SM +++GI+  + HY+CM+DL  R+G+L+ A  FI  +P  P A  W  L
Sbjct: 498 LVEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATL 557

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            +ACR   D+++ ++ ++ +L+ DP + A YV L +M+A  G  ++    R+ M+ +++ 
Sbjct: 558 LSACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVK 617

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDN 705
           KEPGCSWI+  N+++ F + ++SH     +YEKL+ L  ++ + G+            D 
Sbjct: 618 KEPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADA 677

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           EK   +  HSE+LA+ FGLI +P +      + L 
Sbjct: 678 EKVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLR 712


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 217/644 (33%), Positives = 358/644 (55%), Gaps = 39/644 (6%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP + Y     L   F++ + S C R   L   RR   +   T  C + F   +L++ YA
Sbjct: 39  VPTSTY-----LSNHFLL-LYSKCRR---LSAARR---VFDHTHDC-NVFSFNTLISAYA 85

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K   ++    +  +MP  D  S N L+A YA+      AF  FL++    +  + +T S 
Sbjct: 86  KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145

Query: 224 MLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           ++  CG    I+ G  +QLHA ++     S  +V NAL+T Y K G +++A  +F  L +
Sbjct: 146 IITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSE 201

Query: 282 -RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+ +SW +++  + QH +  K L L   M   G+  + +T    L +  ++++   G  
Sbjct: 202 DRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQ 261

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGE-IWEAKKQLKEMGKSASSVSWNAQIAGF-FR 398
           FHA++IK G      VG+ ++D+YS  G  + + +K   E+  +   V WN  I+G+   
Sbjct: 262 FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI-SNPDLVLWNTMISGYSLY 320

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN-VH 457
              ++EA+E F Q+       D+ +   ++ ACS + S +   Q+H   +K    SN + 
Sbjct: 321 EDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS 380

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V ++LI  Y+KCG+  DA+ +F  +   + VS+NSMI  Y+Q+G   +++ LF++M+  G
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMG 440

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             PTN TF++VL+AC+H+G V+DG+  F  M +++GI PE  H+SCM+DLLGRAGKL  A
Sbjct: 441 FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEA 500

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
              I  +P  P    W  L  ACR H ++++A   + ++L+LDP +AA YV L+N+Y++ 
Sbjct: 501 ERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDN 560

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   DA   RKLM+ + + K+PGCSWIEV  +I+ F +++  H  + K+ E L+++M++I
Sbjct: 561 GRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKI 620

Query: 698 EDIGHT---------------DNEKEDRVLYHSERLAVGFGLIS 726
           + +G+T                 E+E R+ +HSE+LAV FGL+S
Sbjct: 621 KKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMS 664



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 171/359 (47%), Gaps = 35/359 (9%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC------------ 266
           + +   L  C +   +  GK LHA  +K    + T +SN  L +Y KC            
Sbjct: 9   HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 267 -------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                                +E A  +F+ + Q + +S+  +I  + + GD +   +L 
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             MRE  +D + +T +  + +C    N  +    HA  +  G+     VG A++  YS  
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKN 186

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G + EA++    + +    VSWN+ +  + ++++  +A+E + +M       D FT +S+
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS-WEDAERVFSQLTAAD 486
           L A + +  L    Q H++++KS +  N HVGS LI+ Y+KCG    D  +VF +++  D
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306

Query: 487 VVSWNSMIKAYS-QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           +V WN+MI  YS     + +A+  F ++ V G RP + + + V+SACS+      G++V
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 12/147 (8%)

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  FS ++ N        +   LK C     L T + +H+  +KS   ++ ++ +  +  
Sbjct: 1   MHHFSSLLHN--------FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLL 52

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y+KC     A RVF      +V S+N++I AY++      A  LF++M     +P + ++
Sbjct: 53  YSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMP----QPDSVSY 108

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEY 552
             +++A +  G  Q   ++F  M + +
Sbjct: 109 NTLIAAYARRGDTQPAFQLFLEMREAF 135


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 203/619 (32%), Positives = 327/619 (52%), Gaps = 47/619 (7%)

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           GD +    +  ++P  ++   N ++ GY++        S +L++    V+P+ YT+  + 
Sbjct: 87  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146

Query: 226 AICGSLSAIDEGKQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
                  A++ G+QLH   +K  LQY     V  AL+ MY+ CG ++ A  VF+   + +
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQY--NVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 204

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           VI+W  II+ + + G +E+  RL  +M +  + P   T  + L++C+ L++   G   H+
Sbjct: 205 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 264

Query: 344 QV------------------------------IKRGMALGDFVG-TAIVDMYSGLGEIWE 372
            V                              I R M   D +  T IV  ++ LGEI  
Sbjct: 265 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDV 324

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +M +    VSW A I G+ R+ + +EA+E F  M   +   DEFT  S+L AC+
Sbjct: 325 ARNYFDKMPEK-DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 383

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +L   E I + I ++K ++++ V ++LI+ Y KCG  + AE +F +++  D  +W +
Sbjct: 384 HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTA 443

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI   + NG   KA+ +F  M+   I P   T++ VLSAC+H+GLV  G+K F  M  ++
Sbjct: 444 MIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 503

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P  AHY C+VDLL RAG+L+ A   I N+PIK  + +W  L A CR + +  MAE +
Sbjct: 504 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 563

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
            KQILEL+PD+ AVYV L N+YA      D  E R++M  K I K PGCS IE+  +++ 
Sbjct: 564 VKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHE 623

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F + ++SH +   +  KL ++ Q ++  G++           + +KE+ V  HSE+LA+ 
Sbjct: 624 FVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIA 683

Query: 722 FGLISLPAKNKFECSRTLE 740
           FGLI+ P       ++ L 
Sbjct: 684 FGLINSPPGVTIRITKNLR 702



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 195/438 (44%), Gaps = 42/438 (9%)

Query: 128 SREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           +R+  LE GR+ H  + K  +  + FV  +LV MY  CG + +   V    P  D+ + N
Sbjct: 150 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 209

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            +++ Y K   F+++   FL ++   V P   T   +L+ C  L  +  GK++H+     
Sbjct: 210 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 269

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD-------- 299
           +  S   + NA++ MY  CG M+ A  +F  +  R++ISWT I++GF   G+        
Sbjct: 270 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 329

Query: 300 -----------------------YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
                                  +++ L L   M+   + P+E+T    L +CA L    
Sbjct: 330 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 389

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G      + +  +    FV  A++DMY   G++ +A+   +EM +     +W A I G 
Sbjct: 390 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGL 448

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESN 455
             N   E+A++ FS M++     DE TY  +L AC+    +    +   R+  +   E N
Sbjct: 449 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 508

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMI---KAYSQNGRARKAIILFE 511
           +     L++   + G  ++A  V   +   A+ + W +++   + Y ++  A   +    
Sbjct: 509 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV---- 564

Query: 512 KMVVEGIRPTNSTFLAVL 529
           K ++E + P N     +L
Sbjct: 565 KQILE-LEPDNGAVYVLL 581



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 42/313 (13%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK--- 176
           ++ VLS CS+ + L  G++ H+ +    V  +  +  ++++MYA CG++ S + + +   
Sbjct: 243 LVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN 302

Query: 177 ----------------------------QMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
                                       +MP  D  S   ++ GY ++  F +A   F  
Sbjct: 303 NRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRN 362

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +   +V+P+ +T  ++L  C  L A++ G+ +     + +  +   V NAL+ MY KCG 
Sbjct: 363 MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 422

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ++ AES+F  + QR+  +WTA+I G   +G  EK L +   M +  I P+E T+   L++
Sbjct: 423 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 482

Query: 329 CASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           C     +H G +      F     + G+         +VD+ +  G + EA + ++ M  
Sbjct: 483 C-----THTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPI 537

Query: 383 SASSVSWNAQIAG 395
            A+S+ W A +AG
Sbjct: 538 KANSIVWGALLAG 550



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM--YSGLGEIWEAK 374
           P  +     L +C S+         H Q IK+G+     +   ++        G+   A+
Sbjct: 37  PPTHPLISLLETCESMDQLQQ---VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 93

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +   E+ +    + WN  I G+ R    +  +  + +M+R     D +T+  + K  +  
Sbjct: 94  RLFDEIPEPNLFI-WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 152

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L    Q+H  ++K   + NV V ++L++ Y  CG  + A  VF     ADV++WN +I
Sbjct: 153 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 212

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY++ G+  ++  LF  M  + + PT  T + VLSACS    ++ G+KV  S VK   +
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV-HSYVKNCKV 271

Query: 555 LPEEAHYSCMVDLLGRAGKLEIAL 578
                  + M+D+    G+++ AL
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSAL 295



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 29/267 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA  +F     R  +S + ++ +G+ N+ E  ++RN +    D  P+    D  S T  +
Sbjct: 293 SALGIFRSMNNRDIISWTTIV-SGFTNLGEIDVARNYF----DKMPE---KDYVSWTAMI 344

Query: 107 TCY--------SLESLLDKQ---------FVIEVLSYCSREECLELGRRYHALITKTAVC 149
             Y        +LE   + Q          ++ VL+ C+    LELG      I +  + 
Sbjct: 345 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 404

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            D FV  +L++MY KCGD+    ++ ++M   D  +   ++ G A N   ++A   F  +
Sbjct: 405 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 464

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCG 267
               + P+  TY  +L+ C     +D+G++   + M  Q+  +  +++   L+ +  + G
Sbjct: 465 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLR-MTSQHGIEPNIAHYGCLVDLLARAG 523

Query: 268 MMEDAESVFEGL-VQRNVISWTAIING 293
            +++A  V E + ++ N I W A++ G
Sbjct: 524 RLKEAYEVIENMPIKANSIVWGALLAG 550


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 203/619 (32%), Positives = 327/619 (52%), Gaps = 47/619 (7%)

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           GD +    +  ++P  ++   N ++ GY++        S +L++    V+P+ YT+  + 
Sbjct: 66  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125

Query: 226 AICGSLSAIDEGKQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
                  A++ G+QLH   +K  LQY     V  AL+ MY+ CG ++ A  VF+   + +
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQY--NVFVHTALVQMYLLCGQLDTARGVFDVCPKAD 183

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           VI+W  II+ + + G +E+  RL  +M +  + P   T  + L++C+ L++   G   H+
Sbjct: 184 VITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS 243

Query: 344 QV------------------------------IKRGMALGDFVG-TAIVDMYSGLGEIWE 372
            V                              I R M   D +  T IV  ++ LGEI  
Sbjct: 244 YVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDV 303

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+    +M +    VSW A I G+ R+ + +EA+E F  M   +   DEFT  S+L AC+
Sbjct: 304 ARNYFDKMPEK-DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 362

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +L   E I + I ++K ++++ V ++LI+ Y KCG  + AE +F +++  D  +W +
Sbjct: 363 HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTA 422

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI   + NG   KA+ +F  M+   I P   T++ VLSAC+H+GLV  G+K F  M  ++
Sbjct: 423 MIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 482

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P  AHY C+VDLL RAG+L+ A   I N+PIK  + +W  L A CR + +  MAE +
Sbjct: 483 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 542

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
            KQILEL+PD+ AVYV L N+YA      D  E R++M  K I K PGCS IE+  +++ 
Sbjct: 543 VKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHE 602

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F + ++SH +   +  KL ++ Q ++  G++           + +KE+ V  HSE+LA+ 
Sbjct: 603 FVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIA 662

Query: 722 FGLISLPAKNKFECSRTLE 740
           FGLI+ P       ++ L 
Sbjct: 663 FGLINSPPGVTIRITKNLR 681



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 195/438 (44%), Gaps = 42/438 (9%)

Query: 128 SREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           +R+  LE GR+ H  + K  +  + FV  +LV MY  CG + +   V    P  D+ + N
Sbjct: 129 TRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWN 188

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            +++ Y K   F+++   FL ++   V P   T   +L+ C  L  +  GK++H+     
Sbjct: 189 MIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC 248

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD-------- 299
           +  S   + NA++ MY  CG M+ A  +F  +  R++ISWT I++GF   G+        
Sbjct: 249 KVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYF 308

Query: 300 -----------------------YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
                                  +++ L L   M+   + P+E+T    L +CA L    
Sbjct: 309 DKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALE 368

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G      + +  +    FV  A++DMY   G++ +A+   +EM +     +W A I G 
Sbjct: 369 LGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR-DKFTWTAMIVGL 427

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESN 455
             N   E+A++ FS M++     DE TY  +L AC+    +    +   R+  +   E N
Sbjct: 428 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPN 487

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMI---KAYSQNGRARKAIILFE 511
           +     L++   + G  ++A  V   +   A+ + W +++   + Y ++  A   +    
Sbjct: 488 IAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVV---- 543

Query: 512 KMVVEGIRPTNSTFLAVL 529
           K ++E + P N     +L
Sbjct: 544 KQILE-LEPDNGAVYVLL 560



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 42/313 (13%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK--- 176
           ++ VLS CS+ + L  G++ H+ +    V  +  +  ++++MYA CG++ S + + +   
Sbjct: 222 LVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMN 281

Query: 177 ----------------------------QMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
                                       +MP  D  S   ++ GY ++  F +A   F  
Sbjct: 282 NRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRN 341

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +   +V+P+ +T  ++L  C  L A++ G+ +     + +  +   V NAL+ MY KCG 
Sbjct: 342 MQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGD 401

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ++ AES+F  + QR+  +WTA+I G   +G  EK L +   M +  I P+E T+   L++
Sbjct: 402 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 461

Query: 329 CASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           C     +H G +      F     + G+         +VD+ +  G + EA + ++ M  
Sbjct: 462 C-----THTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPI 516

Query: 383 SASSVSWNAQIAG 395
            A+S+ W A +AG
Sbjct: 517 KANSIVWGALLAG 529



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM--YSGLGEIWEAK 374
           P  +     L +C S+         H Q IK+G+     +   ++        G+   A+
Sbjct: 16  PPTHPLISLLETCESMDQLQQ---VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYAR 72

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +   E+ +    + WN  I G+ R    +  +  + +M+R     D +T+  + K  +  
Sbjct: 73  RLFDEIPEPNLFI-WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L    Q+H  ++K   + NV V ++L++ Y  CG  + A  VF     ADV++WN +I
Sbjct: 132 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY++ G+  ++  LF  M  + + PT  T + VLSACS    ++ G+KV  S VK   +
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV-HSYVKNCKV 250

Query: 555 LPEEAHYSCMVDLLGRAGKLEIAL 578
                  + M+D+    G+++ AL
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSAL 274



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 29/267 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA  +F     R  +S + ++ +G+ N+ E  ++RN +    D  P+    D  S T  +
Sbjct: 272 SALGIFRSMNNRDIISWTTIV-SGFTNLGEIDVARNYF----DKMPE---KDYVSWTAMI 323

Query: 107 TCY--------SLESLLDKQ---------FVIEVLSYCSREECLELGRRYHALITKTAVC 149
             Y        +LE   + Q          ++ VL+ C+    LELG      I +  + 
Sbjct: 324 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 383

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            D FV  +L++MY KCGD+    ++ ++M   D  +   ++ G A N   ++A   F  +
Sbjct: 384 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 443

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCG 267
               + P+  TY  +L+ C     +D+G++   + M  Q+  +  +++   L+ +  + G
Sbjct: 444 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLR-MTSQHGIEPNIAHYGCLVDLLARAG 502

Query: 268 MMEDAESVFEGL-VQRNVISWTAIING 293
            +++A  V E + ++ N I W A++ G
Sbjct: 503 RLKEAYEVIENMPIKANSIVWGALLAG 529


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 187/575 (32%), Positives = 321/575 (55%), Gaps = 1/575 (0%)

Query: 127  CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
            CS  E L+ GR+ H  + K     D +V  SL+ MYAK G ++    V  Q+   ++   
Sbjct: 659  CSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR 718

Query: 187  NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
            N +++ +  N     A   + K+   +   + +T S++L+ C  + + D G+ +HA+ +K
Sbjct: 719  NAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIK 778

Query: 247  LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                S  A+ +ALLTMY KCG  EDA+SVF  + +R+V++W ++I GF Q+  ++  L L
Sbjct: 779  RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 838

Query: 307  VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
               M ++G+  +    T  +++   L N  +G++ H   IKRG+    FV  ++VDMYS 
Sbjct: 839  FRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSK 898

Query: 367  LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
             G    A+     M  + + V+WN+ I+ +  N   E +I    Q++++    D  + ++
Sbjct: 899  FGFAESAEMVFSSM-PNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 957

Query: 427  ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            +L A S + +L   + +H+  ++ +  S++ V ++LI+ Y KCG  + A+ +F  +   +
Sbjct: 958  VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 1017

Query: 487  VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            +V+WNSMI  Y  +G   +A+ LF++M      P   TFLA++++CSHSG+V++G  +F+
Sbjct: 1018 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 1077

Query: 547  SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
             M  EYG+ P   HY+ +VDLLGRAG+L+ A  FI  +PI     +W  L  ACR H ++
Sbjct: 1078 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNM 1137

Query: 607  KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            ++ E ++  +L+++P   + YV L N+Y E  +   A   R  MK + + K PGCSWIEV
Sbjct: 1138 ELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEV 1197

Query: 667  YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
             N++  FFS + S +   ++Y+ L  L   +E  G
Sbjct: 1198 KNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 248/503 (49%), Gaps = 11/503 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--- 179
           +L  C+    L  GR  HA I    +  D ++  SL+NMY KCG + S + V  +M    
Sbjct: 447 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506

Query: 180 --YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
               DI   N ++ GY K   F++  + F ++  + ++P+ Y+ S +L IC  LS    G
Sbjct: 507 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQ 296
           +Q+H   ++  +     +  AL+ MY  C    +A S+F  L  R N+++W  +I GF +
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G +EK L L  L + +       +FT A  +C+       G   H  VIK       +V
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            T+++ MY+  G + +AKK   ++      +  NA I+ F  N +  +A+  +++M   +
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-NAMISAFIGNGRAYDALGLYNKMKAGE 745

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D FT SS+L  CS++ S      +H+ ++K   +SNV + S+L+  Y KCGS EDA+
Sbjct: 746 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF  +   DVV+W SMI  + QN R + A+ LF  M  EG++  +    +V+SA     
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            V+ G  +    +K    L  +   +C +VD+  + G  E A +  S++P K     W  
Sbjct: 866 NVELGHLIHGFAIKRG--LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-WNS 922

Query: 596 LFAACRCHSDLKMAEFISKQILE 618
           + +    +   +M+  +  QIL+
Sbjct: 923 MISCYSWNGLPEMSINLLPQILQ 945



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 183/360 (50%), Gaps = 9/360 (2%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           + QA     K     +    +T+ ++L  C SLS +  G+ +HA  + +   S   ++ +
Sbjct: 422 YSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATS 481

Query: 259 LLTMYIKCGMMEDAESVFEGLVQR-----NVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           L+ MY+KCG++  A  VF+ + +      ++  W  +I+G+ ++G +E+ L   C M+E 
Sbjct: 482 LINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQEL 541

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWE 372
           GI P+ Y+ ++ L  C  L     G   H  +I R M  GD ++ TA++ MYS      E
Sbjct: 542 GIRPDGYSLSIVLGICNRLSWYMAGRQIHGYII-RNMFEGDPYLETALIGMYSSCSRPME 600

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A     ++   ++ V+WN  I GF  N   E+++E +S     +      +++    ACS
Sbjct: 601 AWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACS 660

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
               L    Q+H  ++K  F+ + +V +SL+  Y K GS EDA++VF Q+   +V   N+
Sbjct: 661 HGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNA 720

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKVFESMVKE 551
           MI A+  NGRA  A+ L+ KM   G  P +S T  ++LS CS  G    G+ V   ++K 
Sbjct: 721 MISAFIGNGRAYDALGLYNKMKA-GETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR 779



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 161/321 (50%), Gaps = 1/321 (0%)

Query: 112  ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            E+ +D   +  +LS CS     + GR  HA + K ++  +  + ++L+ MY KCG  +  
Sbjct: 745  ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 804

Query: 172  VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             +V   M   D+ +   ++AG+ +N  F  A   F  ++   V+ +    +++++    L
Sbjct: 805  DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 864

Query: 232  SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
              ++ G  +H   +K    S   V+ +L+ MY K G  E AE VF  +  +N+++W ++I
Sbjct: 865  ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 924

Query: 292  NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            + +  +G  E  + L+  + + G   +  + T  L + +S+     G   HA  I+  + 
Sbjct: 925  SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 984

Query: 352  LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
                V  A++DMY   G +  A+   + M +  + V+WN+ IAG+  +   EEA+  F +
Sbjct: 985  SDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKE 1043

Query: 412  MVRNDAACDEFTYSSILKACS 432
            M R++ A DE T+ +++ +CS
Sbjct: 1044 MKRSETAPDEVTFLALITSCS 1064



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 5/265 (1%)

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I    Q G Y + L L        +   ++TF   L +CASL N + G   HA ++  G+
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS----WNAQIAGFFRNQKTEEAI 406
               ++ T++++MY   G +  A +   +M +S  S      WN  I G+F+    EE +
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
             F +M       D ++ S +L  C+ L       QIH  I+++ FE + ++ ++LI  Y
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 467 NKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           + C    +A  +F +L   +++V+WN MI  + +NG   K++ L+     E  +  +++F
Sbjct: 593 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 526 LAVLSACSHSGLVQDGQKVFESMVK 550
               +ACSH  ++  G++V   ++K
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIK 677



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/340 (22%), Positives = 139/340 (40%), Gaps = 49/340 (14%)

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
           +I    +  K  +A+E  S+   +     +FT+ S+LK C+ L +L     IH+ IV   
Sbjct: 412 EIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMG 471

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQL-----TAADVVSWNSMIKAYSQNGRARKA 506
            +S+ ++ +SLI  Y KCG    A +VF ++     +A D+  WN +I  Y + G   + 
Sbjct: 472 LQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEG 531

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE--------------- 551
           +  F +M   GIRP   +   VL  C+       G+++   +++                
Sbjct: 532 LAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGM 591

Query: 552 -------------YGILPEEAH---YSCMVDLLGRAGKLEIALIFIS---NLPIKPTAPI 592
                        +G L   ++   ++ M+      G  E +L   S   N   K  +  
Sbjct: 592 YSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSAS 651

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +   F AC     L     +   +++++  DD  V  +L  MYA++G   DA++    + 
Sbjct: 652 FTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVL 711

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
            KE         +E+ N +   F  N    +   +Y K+K
Sbjct: 712 DKE---------VELRNAMISAFIGNGRAYDALGLYNKMK 742



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 115  LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            LD   +  VL   S    L  G+  HA   +  +  D  V  +L++MY KCG +K    +
Sbjct: 950  LDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 1009

Query: 175  VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             + MP  ++ + N ++AGY  +   ++A   F ++   +  P+  T+  ++  C     +
Sbjct: 1010 FENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMV 1069

Query: 235  DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
            +EG  L  Q M+++Y  +  + +  +++ +  + G ++DA S   G+ +  +   W  ++
Sbjct: 1070 EEGLNLF-QLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLL 1128

Query: 292  NGFKQHGDYE 301
               + H + E
Sbjct: 1129 FACRAHRNME 1138


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 207/614 (33%), Positives = 330/614 (53%), Gaps = 13/614 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CSR   L  GR  HAL     +    FV+ SLV+MY+KCG++     V       D  S 
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSW 178

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS--AIDEGKQLHAQT 244
           N L++GY +    ++    F  +    +  N +   +++  C       +D  + +H   
Sbjct: 179 NSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCV 238

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY---- 300
           +K    S   + +A++ MY K G + +A ++F  + + NV+ +  +I GF +        
Sbjct: 239 IKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKE 298

Query: 301 --EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L L   ++  G+ P E+TF+  L +C        G   H QVIK      DF+G+
Sbjct: 299 VASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGS 358

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+Y   G + +  +  +   K    V+W A ++G  +N+  E+A+  F + +     
Sbjct: 359 ALIDLYFNSGCMEDGFRCFRSSPKH-DIVTWTAMVSGCVQNELHEKALSLFHESLGAGLK 417

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT SS++ AC+ L      EQI     KS F+    +G+S +  Y + G  + A R 
Sbjct: 418 PDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++ + DVVSW+++I  ++Q+G AR A+  F++MV   + P   TFL VL+ACSH GLV
Sbjct: 478 FQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLV 537

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G + +E+M K+YG+ P   H +C+VDLLGRAG+L  A  FISN        IWR L A
Sbjct: 538 DEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLA 597

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H DL+  + ++ +I+EL+P  +A YV L NMY +AG  + A + R LMK + + KE
Sbjct: 598 SCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKE 657

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE---KEDRVLY-H 714
           PG SWIE+   ++ F + +KSH E   +Y KL++++ +IE +  TD E   +E  ++  H
Sbjct: 658 PGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLATTDTEISKREQNLMNCH 717

Query: 715 SERLAVGFGLISLP 728
           SE+LAV  G+I LP
Sbjct: 718 SEKLAVALGMIHLP 731



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 203/400 (50%), Gaps = 9/400 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+  +L+  Y + G       ++ +MP  +  S N L+  Y++  L   +     +    
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  + ++Y+  LA C     +  G+ +HA  +     S   VSN+L++MY KCG M +A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+   +R+ +SW ++++G+ + G  E+ +R+  +MR  G+  N +     +  C+  
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 333 RNSHM--GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            +  M      H  VIK G+    F+ +A++DMY+  G + EA    + + +  + V +N
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSV-QEPNVVMFN 282

Query: 391 AQIAGFFRNQKT------EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             IAGF R +         EA+  +S++        EFT+SS+L+AC+L   L   +QIH
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
            +++K  F+ +  +GS+LI+ Y   G  ED  R F      D+V+W +M+    QN    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           KA+ LF + +  G++P   T  +V++AC+   + + G+++
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQI 442


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 205/667 (30%), Positives = 359/667 (53%), Gaps = 54/667 (8%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D+   + VLS  +  + LEL      +  KT   GD  V ++++N Y + G +   +   
Sbjct: 360  DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            + MP  +  S   ++A +A+    D A   + ++      P   T +T  A+  + + + 
Sbjct: 420  ETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERV------PEQ-TVATKTAMMTAYAQV- 471

Query: 236  EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+   A+ +  + L+   V+ NA++  Y + GM+++A+ +F+ +  +N  SW A+I GF
Sbjct: 472  -GRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGF 530

Query: 295  KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             Q+ +  + L L+  +   G  P++ +FT AL++CA++ +  +G + H+  IK G     
Sbjct: 531  VQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNS 590

Query: 355  FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +V   ++ MY+  G + +     + + +   +VSWN+ I+G   N   ++A   F +M +
Sbjct: 591  YVMNGLISMYAKCGNVEDGSHVFRTI-RVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649

Query: 415  NDAAC-------------------------------DEFTYSSILKACSLLPSLATCEQI 443
             D                                  ++ T +S+L AC  L ++   EQ 
Sbjct: 650  RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQF 709

Query: 444  HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
            H+ I K  F++ + VG+SLI  Y KCG +ED   VF ++   D+++WN+++   +QNG  
Sbjct: 710  HALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLG 768

Query: 504  RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
            ++AI +FE+M VEGI P   +FL VL ACSH+GLV +G   F SM ++YGI+P   HY+C
Sbjct: 769  KEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTC 828

Query: 564  MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
            MVDLLGRAG L  A   I N+P+KP + IW  L  ACR H ++++ + +++++ ++    
Sbjct: 829  MVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPK 888

Query: 624  AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
            +A YV LSN++A  G+     E RKLMK + ++KEPG SWI+V NK++ F + +++H ++
Sbjct: 889  SATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQI 948

Query: 684  PKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNK 732
             ++Y  LK+        G+            + +K++ +LYHSE+LAV FG++S P  + 
Sbjct: 949  EEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGSP 1008

Query: 733  FECSRTL 739
             +  + L
Sbjct: 1009 IQIIKNL 1015



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 201/429 (46%), Gaps = 43/429 (10%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           S+V  Y  C  +     +  QMP  +  S   +++GY   + + +A+  F+K+     +P
Sbjct: 300 SVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARP 359

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +   +  +L+    L  ++    L    +K  Y     V +A+L  Y + G ++ A   F
Sbjct: 360 DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           E + +RN  SWT +I  F Q G  +  ++L   + E          TVA  +      + 
Sbjct: 420 ETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQ---------TVATKTAMMTAYAQ 470

Query: 337 MGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +G +  A++I   +   + V   AI+  Y+  G + EAK   ++M    +S SW A IAG
Sbjct: 471 VGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKM-PVKNSASWAAMIAG 529

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           F +N+++ EA+E   ++ R+ +   + +++S L AC+ +  +     IHS  +K+  + N
Sbjct: 530 FVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFN 589

Query: 456 VHVGSSLIEAYNKCG------------------SW-------------EDAERVFSQLTA 484
            +V + LI  Y KCG                  SW             +DA  VF ++  
Sbjct: 590 SYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPK 649

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            DVVSW ++I AY Q G    A+ LF  M+  GI+P   T  ++LSAC + G ++ G++ 
Sbjct: 650 RDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ- 708

Query: 545 FESMVKEYG 553
           F +++ + G
Sbjct: 709 FHALIFKLG 717



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/519 (21%), Positives = 229/519 (44%), Gaps = 31/519 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I+ L    R E  E  R ++ +I +  V  +     S++N Y++ G +     +      
Sbjct: 178 IQELGRLGRVE--EARRVFNEMIQRDVVSWN-----SMINGYSQNGKVDEARLLFDAFVG 230

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            +I +   LL GYAK    ++A   F  +     + N  +++ M++       +  G   
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEAREVFESM----TERNVVSWNAMIS-----GYVQNGDLK 281

Query: 241 HAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +A+ +  +   K   S N+++T Y  C  M +A  +F+ + +RN +SW  +I+G+    D
Sbjct: 282 NARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISD 341

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           Y +   +   M      P++  F V L++   L +  +        IK G      VG+A
Sbjct: 342 YWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSA 401

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           I++ Y+  G + +      E     +  SW   IA F +  + ++AI+ + ++     A 
Sbjct: 402 ILNAYTRNGSL-DLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVA- 459

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
              T ++++ A + +  +     I   I+      NV   +++I  Y + G  ++A+ +F
Sbjct: 460 ---TKTAMMTAYAQVGRIQKARLIFDEILN----PNVVAWNAIIAGYTQNGMLKEAKDLF 512

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   +  SW +MI  + QN  +R+A+ L  ++   G  P++S+F + LSAC++ G V+
Sbjct: 513 QKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVE 572

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G +V  S+  + G        + ++ +  + G +E        + +K T   W  L + 
Sbjct: 573 IG-RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVS-WNSLISG 630

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
              +  L  A  + ++   +   D   +  + + Y +AG
Sbjct: 631 LSENYMLDDARVVFEK---MPKRDVVSWTAIISAYVQAG 666


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1134

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 192/592 (32%), Positives = 331/592 (55%), Gaps = 18/592 (3%)

Query: 150 GDQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
           G   +T++ L++MY KC +      V   MP  ++ S   L++G+  N   + + S F +
Sbjct: 401 GLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTE 460

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    + PN +T+ST L  CG L+A+++G Q+H   +K+ +     V N+L+ MY KCG 
Sbjct: 461 MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 520

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID--PNEYTFTVAL 326
           + +AE VF  +V R++ISW A+I G+   G   + L    +M+E  I   P+E+T T  L
Sbjct: 521 INEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLL 580

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            +C+S    + G   H  +++ G        +  ++VD+Y   G ++ A+K   ++ K  
Sbjct: 581 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQI-KEK 639

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           + +SW++ I G+ +     EA+  F ++    +  D F  SSI+   +    L   +Q+ 
Sbjct: 640 TMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQ 699

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           + +VK        V +SL++ Y KCG  ++AE+ F+++   DV+SW  MI  Y ++G  +
Sbjct: 700 ALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGK 759

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           KA+ +F KM+   I P    +LAVLSACSHSG++++G+++F  +++  GI P   HY+C+
Sbjct: 760 KAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACV 819

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           VDLLGRAG+L+ A   +  +PIKP   IW+ L + CR H D+++ + + K +L +D  + 
Sbjct: 820 VDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNP 879

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           A YV +SN+Y +AG   +    R+L  +K + KE G SW+E+  +++ F S   SH    
Sbjct: 880 ANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTL 939

Query: 685 KVYEKLKQLMQQI-EDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            + E LK++ +++ E++G+            D  KE+ +  HSE+LA+G  L
Sbjct: 940 VIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLAL 991



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 210/453 (46%), Gaps = 40/453 (8%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C     LE G + H    K        V  SLV+MY+KCG I     V + M    +
Sbjct: 477 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSL 536

Query: 184 ASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            S N ++AGY       +A + F  ++   I  +P+ +T +++L  C S   I  GKQ+H
Sbjct: 537 ISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIH 596

Query: 242 AQTMKLQYL--SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
              ++  +   S   ++ +L+ +Y+KCG +  A   F+ + ++ +ISW+++I G+ Q GD
Sbjct: 597 GFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGD 656

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           + + + L   ++E     + +  +  +   A       G    A V+K    L   V  +
Sbjct: 657 FVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY   G + EA+K   EM +    +SW   I G+ ++   ++A+  F++M+R++   
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEM-QLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEP 775

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           DE  Y ++L ACS           HS ++K   E    + S L+E               
Sbjct: 776 DEVCYLAVLSACS-----------HSGMIKEGEE----LFSKLLE--------------- 805

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           +Q     V  +  ++    + GR ++A  L + M    I+P    +  +LS C   G ++
Sbjct: 806 TQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMP---IKPNVGIWQTLLSLCRVHGDIE 862

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
            G++V + +++  G  P  A+Y  M +L G+AG
Sbjct: 863 LGKEVGKILLRIDGKNP--ANYVMMSNLYGQAG 893



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 127/239 (53%), Gaps = 13/239 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAV-C-GDQFVTASLVNMYAKCGDIKSMVA 173
           D+  +  +L  CS    +  G++ H  + ++   C     +T SLV++Y KCG++ S   
Sbjct: 572 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARK 631

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
              Q+    + S + L+ GYA+   F +A   F +L  +  Q + +  S+++ +    + 
Sbjct: 632 AFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFAL 691

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           + +GKQ+ A  +KL    +T+VSN+L+ MY+KCG++++AE  F  +  ++VISWT +I G
Sbjct: 692 LQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           + +HG  +K + +   M    I+P+E  +   L++C+           H+ +IK G  L
Sbjct: 752 YGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACS-----------HSGMIKEGEEL 799



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 3/227 (1%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L S +D   +  ++   +    L+ G++  AL+ K     +  V+ SLV+MY KCG +  
Sbjct: 670 LSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDE 729

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                 +M   D+ S   ++ GY K+ L  +A S F K+   +++P+   Y  +L+ C  
Sbjct: 730 AEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSH 789

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWT 288
              I EG++L ++ ++ Q +       A ++ +  + G +++A+ + + + ++ NV  W 
Sbjct: 790 SGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQ 849

Query: 289 AIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCASLRN 334
            +++  + HGD E    +   L+R DG +P  Y     L   A   N
Sbjct: 850 TLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWN 896


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 201/612 (32%), Positives = 331/612 (54%), Gaps = 12/612 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA   K     + FV +SL++ Y+ CG +     V   + + D  +   +++ Y++N + 
Sbjct: 173 HACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIP 232

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A + F K+     +PN +  +++L     LS+   GK +H   +K    ++  V  AL
Sbjct: 233 EDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGAL 292

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG +EDA +VFE +   +VI W+ +I+ + Q    E+   +   M    + PNE
Sbjct: 293 LDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNE 352

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           ++ +  L +CA++    +G   H  VIK G     FVG A++D+Y+    +  + +  + 
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRS 412

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           + + A+ VSWN  I G+ ++   E+A+  F +M        + T+SS+L+AC+   S+  
Sbjct: 413 L-RDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKH 471

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             QIHS I KS F ++  V +SLI+ Y KCG   DA +VF  +   DVVSWN++I  Y+ 
Sbjct: 472 TVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYAL 531

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +GRA  A+ LF +M     +P + TF+A+LS C  +GLV  G  +F SM  ++ I P   
Sbjct: 532 HGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMD 591

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+C+V LLGRAG+L  AL FI ++P  P+  +WR L ++C  H ++ + +F ++++LE+
Sbjct: 592 HYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEI 651

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P D   YV LSNMYA AG+       RK M+   + KE G SW+E+  +++ F   +  
Sbjct: 652 EPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSAD 711

Query: 680 HSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLP 728
           H +M  +   L+ L  +    G+           D E++ R+L+ HSERLA+ +GL   P
Sbjct: 712 HPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTP 771

Query: 729 AKNKFECSRTLE 740
             +     + L 
Sbjct: 772 PGHPIRIMKNLR 783



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 236/466 (50%), Gaps = 4/466 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMV 172
           LD      +L  C        GR  HA + +       D F    L+N+YAK G + +  
Sbjct: 45  LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +   MP  ++ S   L+ GYA    F++A   F +L     + NH+  +T+L +  ++ 
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMD 164

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A      +HA   KL +     V ++L+  Y  CG +  A  VF+G++ ++ ++WTA+++
Sbjct: 165 APGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVS 224

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + ++   E  L     MR  G  PN +  T  L +   L ++ +G   H   +K     
Sbjct: 225 CYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDT 284

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              VG A++DMY+  G I +A+    E+      + W+  I+ + ++ + E+A E F +M
Sbjct: 285 EPHVGGALLDMYAKCGYIEDARTVF-EIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRM 343

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +R+    +EF+ S +L+AC+ +  L   +QIH+ ++K  +ES + VG++L++ Y KC + 
Sbjct: 344 MRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNM 403

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E++  +F  L  A+ VSWN++I  Y Q+G A  A+ +F++M    +  T  TF +VL AC
Sbjct: 404 ENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRAC 463

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +++  ++   ++  S++++     +    + ++D   + G +  AL
Sbjct: 464 ANTASIKHTVQI-HSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDAL 508



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 159/297 (53%), Gaps = 1/297 (0%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG+  H    KT    +  V  +L++MYAKCG I+    V + +P+ D+   + L++ YA
Sbjct: 269 LGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYA 328

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++   +QAF  FL++    V PN ++ S +L  C +++ +D G+Q+H   +KL Y S+  
Sbjct: 329 QSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELF 388

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V NAL+ +Y KC  ME++  +F  L   N +SW  II G+ Q G  E  L +   MR   
Sbjct: 389 VGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAH 448

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +   + TF+  L +CA+  +       H+ + K        V  +++D Y+  G I +A 
Sbjct: 449 VLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDAL 508

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           K  + + +    VSWNA I+G+  + +  +A+E F++M ++D   ++ T+ ++L  C
Sbjct: 509 KVFESIIQ-CDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVC 564



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 157/317 (49%), Gaps = 11/317 (3%)

Query: 79  ISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRR 138
           ISR   S +N+   + F+    S+ VP   +SL           VL  C+    L+LG++
Sbjct: 324 ISRYAQSYQNEQAFEMFLRMMRSSVVPNE-FSLSG---------VLQACANVAFLDLGQQ 373

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H L+ K     + FV  +L+++YAKC ++++ + + + +   +  S N ++ GY ++  
Sbjct: 374 IHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGF 433

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            + A S F ++    V     T+S++L  C + ++I    Q+H+   K  + + T V N+
Sbjct: 434 AEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNS 493

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+  Y KCG + DA  VFE ++Q +V+SW AII+G+  HG     L L   M +    PN
Sbjct: 494 LIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPN 553

Query: 319 EYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           + TF   L+ C S    + G  +F++  +   +       T IV +    G + +A K +
Sbjct: 554 DVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFI 613

Query: 378 KEMGKSASSVSWNAQIA 394
            ++  + S + W A ++
Sbjct: 614 GDIPSTPSPMVWRALLS 630


>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 186/570 (32%), Positives = 315/570 (55%), Gaps = 2/570 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H L  K+      +   ++++ YAKCG+I+    +  +    D  S N ++AG+     F
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A  F   +       + Y++ ++L     +  ++ G+Q+H+  +K+ Y       +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KC  +EDA  VF+ +  RN ++W A+I+G+ Q GD      L+  M  +G++ ++
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            TF   L          +    HA+++K G+A    V  AI+  YS  G I +A++    
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 380 M--GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
               +    VSWN+ + GF ++  +E+A++ F  M       D + +S++L++CS L +L
Sbjct: 262 AIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATL 321

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q+H  ++KS FE N  V SSLI  Y+KCG  EDA + F        ++WNS+I  Y
Sbjct: 322 QLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGY 381

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +Q+GR + A+ LF  M    ++  + TF+AVL+ACSH GLV++G    +SM  +YGI P 
Sbjct: 382 AQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPR 441

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CM+DLLGRAG+L+ A   I  +P +P A +W+ L  ACR   D+++A  ++  +L
Sbjct: 442 MEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL 501

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL+P++   YV LS+M+       +    ++LMK + + K PG SWIEV N++  F +++
Sbjct: 502 ELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAED 561

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           +SH    ++Y +L +LM++I  + +  N +
Sbjct: 562 RSHPNCEEIYLRLGELMEEIRRLDYVANSE 591



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 232/492 (47%), Gaps = 62/492 (12%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN--GYSTRNDSFP-----DGFI 96
           AS + C L  KS   A + T++ I +GY    E  I+    G +++ D+        GF+
Sbjct: 18  ASVNHC-LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFV 76

Query: 97  DDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECL------ELGRRYHALITKTAVCG 150
           + G   T       L+S+    F ++  S+ S  + +      E+G++ H+++ K    G
Sbjct: 77  NLGNFET---ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL--- 207
           + F  ++L++MYAKC  ++    V K +   +  + N L++GYA+  + D+  +F+L   
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ--VGDRGTAFWLLDC 191

Query: 208 -KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
            +L+G+++     T++ +L +           Q+HA+ +K    S T V NA++T Y +C
Sbjct: 192 MELEGVEIDDG--TFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 267 GMMEDAESVFEGLVQ-RNV--ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           G +EDAE VF+G ++ R++  +SW +I+ GF Q G  E  L+    MR   +  + Y F+
Sbjct: 250 GSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFS 309

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             L SC+ L    +G   H  V+K G     FV ++++ MYS  G I +A+K      K 
Sbjct: 310 AVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKD 369

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS----------- 432
            SS++WN+ I G+ ++ + + A++ F  M       D  T+ ++L ACS           
Sbjct: 370 -SSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF 428

Query: 433 ----------------------LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
                                 LL      ++  + I    FE +  V  +L+ A   CG
Sbjct: 429 LKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCG 488

Query: 471 SWEDAERVFSQL 482
             E A +V S L
Sbjct: 489 DIELASQVASHL 500



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 181/383 (47%), Gaps = 6/383 (1%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S +A+      H   +K    +    +N +++ Y KCG +  A  +F    QR+ +SW  
Sbjct: 11  SFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNT 70

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I GF   G++E  L  +  M+  G   + Y+F   L   A +    +G   H+ ++K G
Sbjct: 71  MIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMG 130

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                F G+A++DMY+    + +A +  K +    +SV+WNA I+G+ +      A    
Sbjct: 131 YEGNVFAGSALLDMYAKCERVEDAFEVFKSI-NIRNSVTWNALISGYAQVGDRGTAFWLL 189

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M       D+ T++ +L             Q+H++IVK    S+  V +++I AY++C
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 470 GSWEDAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           GS EDAERVF    +    D VSWNS++  +SQ+G +  A+  FE M  + +   +  F 
Sbjct: 250 GSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFS 309

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           AVL +CS    +Q GQ+V   +V + G  P     S ++ +  + G +E A       P 
Sbjct: 310 AVLRSCSDLATLQLGQQV-HVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP- 367

Query: 587 KPTAPIWRPLFAACRCHSDLKMA 609
           K ++  W  L      H   K+A
Sbjct: 368 KDSSIAWNSLIFGYAQHGRGKIA 390



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 6/209 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L+LG++ H L+ K+    + FV +SL+ MY+KCG I+         P   
Sbjct: 311 VLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDS 370

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L+ GYA++     A   F  +    V+ +H T+  +L  C  +  ++EG     
Sbjct: 371 SIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSF-L 429

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
           ++M+  Y     + +   ++ +  + G +++A+++ E +  + + + W  ++   +  GD
Sbjct: 430 KSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGD 489

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            E   ++   + E  ++P E+   V L+S
Sbjct: 490 IELASQVASHLLE--LEPEEHCTYVLLSS 516


>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 663

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 198/652 (30%), Positives = 333/652 (51%), Gaps = 64/652 (9%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM--------------- 171
           CS    + +  + H L  K     ++ +  S+++MY KC  I +                
Sbjct: 3   CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62

Query: 172 ----------------VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
                           +   +QMP  D  S N +++ ++ + L  Q+   F+++     Q
Sbjct: 63  NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN  TY+++L+ C ++     GK LHA+ ++++      V N L+ MY KCG+++ ++ V
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  L + NV++WT++I+G    G  E+   +   MR+D +  + +     L  C    N 
Sbjct: 183 FNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNI 242

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK------------- 382
            +G   H   +K GM     VG A + MY+  G+  +A    + M               
Sbjct: 243 SIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSF 302

Query: 383 -----------------SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
                              + +SWNA +  + +N   EE ++ +  M+R +   D  T+ 
Sbjct: 303 SHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFV 362

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           +++ ACS L       QI S+ VK    S+V V +S I  Y++CG  E+A+ +F  +   
Sbjct: 363 TMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSIQEK 422

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +++SWNS++  Y+QNG   K I +F+ M++ G +P + T++A+LS CSHSGLV++ +  F
Sbjct: 423 NLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHF 482

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
            SM K++GI     H+ CMVDL GRAG L++AL  I  +P KP A IW  L +ACR H D
Sbjct: 483 NSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNASIWGALLSACRIHHD 542

Query: 606 LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
            +MAE   K +LEL+ ++   Y+ L+N Y+  G      E R++MK K + K+PGCSWIE
Sbjct: 543 TEMAELAMKNLLELNTENFESYILLANTYSSFGRLECVSEVRQVMKEKRVQKDPGCSWIE 602

Query: 666 VYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHTDNEKEDRVLYHSE 716
           V N+++ F + + SH ++  +Y+ L+ ++++I +D G+ D  +   V Y SE
Sbjct: 603 VCNRVHVFTANDTSHPQVKDIYKALEDIVKKIKDDYGYFD--RSSFVGYRSE 652



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 192/441 (43%), Gaps = 65/441 (14%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+     + G+  HA I +     D  V   LV+MYAKCG I +   V   +   +
Sbjct: 131 VLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLREHN 190

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   L++G A     ++ +  F ++    V  +++  +T+L +C   + I  G+QLH 
Sbjct: 191 VVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHG 250

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD--- 299
            T+K    S   V NA L+MY KCG  E A   FE +   +VISWT +I  F   G+   
Sbjct: 251 FTVKTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVER 310

Query: 300 ----------------------------YEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
                                       +E+ L+L  LM    + P+  TF   + +C+ 
Sbjct: 311 ARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSE 370

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L  S +G    +Q +K G+     V  + + +YS  G I EA+     + +  + +SWN+
Sbjct: 371 LAISKLGTQILSQAVKVGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSI-QEKNLISWNS 429

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            + G+ +N +  + IE F  M+      D  TY +IL  CS           HS +VK  
Sbjct: 430 IMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITYIAILSGCS-----------HSGLVK-- 476

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            E+  H  +S+ + +                 +  +  +  M+  + + G  + A+ + +
Sbjct: 477 -EAKYHF-NSMTKDFG---------------ISVTLEHFVCMVDLFGRAGLLKLALDMID 519

Query: 512 KMVVEGIRPTNSTFLAVLSAC 532
           +M     +P  S + A+LSAC
Sbjct: 520 QM---PFKPNASIWGALLSAC 537



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 153/329 (46%), Gaps = 42/329 (12%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK---- 169
           ++D   +  +L  C  E  + +G + H    KT +     V  + ++MYAKCGD +    
Sbjct: 223 IMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKASL 282

Query: 170 ---SMVA------------------------VVKQMPYLDIASCNCLLAGYAKNALFDQA 202
              +M A                           +MP  ++ S N +L  Y +N+ +++ 
Sbjct: 283 AFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYCQNSFWEEG 342

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
              ++ +   +V+P+  T+ TM+  C  L+    G Q+ +Q +K+   S  +V N+ +T+
Sbjct: 343 LKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVSVVNSAITL 402

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y +CG +E+A+++F+ + ++N+ISW +I+ G+ Q+G+  K + +   M   G  P+  T+
Sbjct: 403 YSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLMAGCKPDHITY 462

Query: 323 TVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
              L+ C     SH G      Y F++     G+++       +VD++   G +  A   
Sbjct: 463 IAILSGC-----SHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDM 517

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           + +M    ++  W A ++    +  TE A
Sbjct: 518 IDQMPFKPNASIWGALLSACRIHHDTEMA 546



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 30/253 (11%)

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK------------ 375
           +C+S+    + +  H    K G      +  +I+DMY     I+ A++            
Sbjct: 2   ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61

Query: 376 ---------QLKEMGKSA---------SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
                    +L EMG++           SVSWN  I+ F  +    +++  F +M     
Sbjct: 62  WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGC 121

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  TY+S+L AC+ +      + +H+RIV+ +   +V VG+ L++ Y KCG  + ++R
Sbjct: 122 QPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKR 181

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF+ L   +VV+W S+I   +  G   +   +F +M  + +   N     +L  C     
Sbjct: 182 VFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILGVCEGETN 241

Query: 538 VQDGQKVFESMVK 550
           +  G+++    VK
Sbjct: 242 ISIGEQLHGFTVK 254



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 43/250 (17%)

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS +  +    Q+H    K  F +N  + +S+I+ Y KC +   AE+VF ++    + S
Sbjct: 2   ACSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFS 61

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN MI  YS+     +AI  F +M        N+    ++SA SH GL           +
Sbjct: 62  WNCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNT----IISAFSHHGL----------HI 107

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           +  G   E     C                       +P +  +  + +AC    D +  
Sbjct: 108 QSLGTFVEMWIQGC-----------------------QPNSMTYASVLSACANIYDFQWG 144

Query: 610 EFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           + +  +I+ ++P  D  V   L +MYA+ GL  DA  +R    ++E       +W  + +
Sbjct: 145 KHLHARIVRVEPFLDVLVGNGLVDMYAKCGL-IDA-SKRVFNTLRE---HNVVTWTSLIS 199

Query: 669 KIYRFFSQNK 678
            I  F SQ +
Sbjct: 200 GIAHFGSQEE 209


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 194/633 (30%), Positives = 344/633 (54%), Gaps = 19/633 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L  G+ +H  + + A   ++F+   ++ MY  C    S      ++   D++S 
Sbjct: 102 CGTLGALSDGKLFHNRLQRMAN-SNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSW 160

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           + +++ Y +    D+A   FL++  + + PN   +ST++      S +D GKQ+H+Q ++
Sbjct: 161 STIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIR 220

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           + + +  ++   +  MY+KCG ++ AE     + ++N ++ T ++ G+ +       L L
Sbjct: 221 IGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLL 280

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G++ + + F++ L +CA+L + + G   H+  IK G+     VGT +VD Y  
Sbjct: 281 FGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVK 340

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
               +EA +Q  E     +  SW+A IAG+ ++ + + A+E F  +       + F Y++
Sbjct: 341 CAR-FEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTN 399

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           I +ACS +  L    QIH+  +K    + +   S++I  Y+KCG  + A + F  +   D
Sbjct: 400 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPD 459

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+W ++I A++ +G+A +A+ LF++M   G+RP   TF+ +L+ACSHSGLV++G+K+ +
Sbjct: 460 TVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILD 519

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM  EYG+ P   HY+CM+D+  RAG L+ AL  I +LP +P    W+ L   C  H +L
Sbjct: 520 SMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNL 579

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++    +  I  LDP D+A YV + N+YA AG   +A + RK+M  + + KE  CSWI V
Sbjct: 580 EIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIV 639

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQL----MQQIEDIGHTDN------EKEDRVLYHSE 716
             K++RF   ++ H +  ++Y KLK+L     +  E + + +N      E+++++L HSE
Sbjct: 640 KGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQLLDHSE 699

Query: 717 RLAVGFGLISLPA-------KNKFECSRTLEYA 742
           RLA+ +GLI   A       KN   C    ++A
Sbjct: 700 RLAIAYGLICTAADTPIMVFKNTRSCKDCHDFA 732



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 236/493 (47%), Gaps = 13/493 (2%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N  L   AK     +   F   +D + +  N  +Y  +  +CG+L A+ +GK  H +  +
Sbjct: 61  NLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNRLQR 120

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           +   S   + N +L MY  C     AE  F+ +V +++ SW+ II+ + + G  ++ +RL
Sbjct: 121 MAN-SNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRL 179

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M + GI PN   F+  + S        +G   H+Q+I+ G A    + T I +MY  
Sbjct: 180 FLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVK 239

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  A+    +M +  ++V+    + G+ +  +  +A+  F +M+      D F +S 
Sbjct: 240 CGWLDGAEVATNKMTRK-NAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSI 298

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ILKAC+ L  L T +QIHS  +K   ES V VG+ L++ Y KC  +E A + F  +   +
Sbjct: 299 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 358

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
             SW+++I  Y Q+G+  +A+ +F+ +  +G+   +  +  +  ACS    +  G ++  
Sbjct: 359 DFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHA 418

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
             +K+ G++   +  S M+ +  + G+++ A      +  KP    W  +  A   H   
Sbjct: 419 DAIKK-GLVAYLSGESAMISMYSKCGQVDYAHQAFLTID-KPDTVAWTAIICAHAYHGKA 476

Query: 607 --KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS-W 663
              +  F   Q   + P +A  ++ L N  + +GL    +E +K+  +  +S E G +  
Sbjct: 477 FEALRLFKEMQGSGVRP-NAVTFIGLLNACSHSGL---VKEGKKI--LDSMSDEYGVNPT 530

Query: 664 IEVYNKIYRFFSQ 676
           I+ YN +   +S+
Sbjct: 531 IDHYNCMIDVYSR 543



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  G++ H+   K  +  +  V   LV+ Y KC   ++     + +   +
Sbjct: 299 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 358

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S + L+AGY ++  FD+A   F  +    V  N + Y+ +   C ++S +  G Q+HA
Sbjct: 359 DFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHA 418

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K   ++  +  +A+++MY KCG ++ A   F  + + + ++WTAII     HG   +
Sbjct: 419 DAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFE 478

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI-- 360
            LRL   M+  G+ PN  TF   L +C     SH G +   + I   M+    V   I  
Sbjct: 479 ALRLFKEMQGSGVRPNAVTFIGLLNAC-----SHSGLVKEGKKILDSMSDEYGVNPTIDH 533

Query: 361 ----VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
               +D+YS  G + EA + ++ +      +SW + + G + ++  E  + A   + R D
Sbjct: 534 YNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLD 593

Query: 417 AACDEFTY 424
              D  TY
Sbjct: 594 -PLDSATY 600



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 5/221 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           LL+      +   CS    L  G + HA   K  +       +++++MY+KCG +     
Sbjct: 391 LLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQ 450

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
               +   D  +   ++  +A +    +A   F ++ G  V+PN  T+  +L  C     
Sbjct: 451 AFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGL 510

Query: 234 IDEGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAI 290
           + EGK++   +M  +Y     +   N ++ +Y + G++++A  V   L  + +V+SW ++
Sbjct: 511 VKEGKKI-LDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSL 569

Query: 291 INGFKQHGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCA 330
           + G   H + E  +     + R D +D   Y     L + A
Sbjct: 570 LGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALA 610


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 317/559 (56%), Gaps = 13/559 (2%)

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           P     S N L+  + +    + A   F++ LD   V P+ +T +  +  C  +  +  G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + + A   K  ++    V N+L+ MY  CG +  A  +F  +  + VI+W A+I G+ ++
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GD+++ + +   M E     +E T      +C  L ++++G        ++GM     + 
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           TA+VDMY+  GE+ +A++    M  S   V+W+A I+G+ ++ +  EA+  F++M   + 
Sbjct: 311 TALVDMYAKCGELDKARRLFDRM-HSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEV 369

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T  S+L AC++L +L T + +HS I +      V +G++L++ Y KCG  +DA +
Sbjct: 370 NPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVK 429

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F  +   +  +W ++IK  + NGR+R+A+ LF  M+   I PT+ TF+ VL ACSH  L
Sbjct: 430 AFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCL 489

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V++G++ F SM ++YGI P   HY CMVDLLGRAG ++ A  FI N+PI+P A +WR L 
Sbjct: 490 VEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALL 549

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +AC  H ++++ E   KQI+ LDP  +  Y+ LSN YA  G   +A   RK MK K + K
Sbjct: 550 SACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEK 609

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------E 706
            PGCS IE+   I+ FF+++  H ++ ++YEK+ ++++ I+ +G+  N           E
Sbjct: 610 IPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEYE 669

Query: 707 KEDRVLYHSERLAVGFGLI 725
           K+  V +HSE+LA+ FGL+
Sbjct: 670 KQVSVSHHSEKLAIAFGLM 688



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 34/434 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V   +  CSR   L +GR   A   K     DQFV  SL++MYA CGD+ +   + 
Sbjct: 170 DQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLF 229

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +    + + N ++AGY KN  + +    F  +  +    +  T  ++   CG L   +
Sbjct: 230 HTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDAN 289

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+ +     +   L    ++ AL+ MY KCG ++ A  +F+ +  R+V++W+A+I+G+ 
Sbjct: 290 LGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYT 349

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q     + L +   M+   ++PN+ T    L++CA L     G   H+ + ++ + L   
Sbjct: 350 QSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVI 409

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +GTA+VD Y+  G I +A K  + M    ++ +W A I G   N ++ EA+E FS M+  
Sbjct: 410 LGTALVDFYAKCGCIKDAVKAFESM-PVRNTWTWTALIKGMASNGRSREALELFSSMLEA 468

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +    + T+  +L ACS           H  +V+   E   H  +S+ + Y  C   E  
Sbjct: 469 NIEPTDVTFIGVLLACS-----------HGCLVE---EGRRHF-TSMTQDYGICPRIE-- 511

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
                         +  M+    + G   +A      M +E   P    + A+LSAC+  
Sbjct: 512 -------------HYGCMVDLLGRAGLIDEAYQFIRNMPIE---PNAVVWRALLSACTVH 555

Query: 536 GLVQDGQKVFESMV 549
             V+ G++  + +V
Sbjct: 556 KNVEIGEEALKQIV 569


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 202/630 (32%), Positives = 333/630 (52%), Gaps = 13/630 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    +E G   H+      +  D FV  +LV+ YAKCG +     +   M + D
Sbjct: 115 VLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRD 174

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++AG +   L D A    +++    + PN  T   +L   G   A+  GK LH 
Sbjct: 175 VVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHG 234

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  + +   V   LL MY KC  +  A  +F+ +  RN +SW+A+I G+      ++
Sbjct: 235 YCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKE 294

Query: 303 PLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            L L   ++ +D +DP   T    L +CA L +   G   H  +IK G  L   +G  ++
Sbjct: 295 ALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLL 354

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY+  G I +A +    M     SVS++A ++G  +N     A+  F  M  +    D 
Sbjct: 355 SMYAKCGVIDDAIRFFDXM-NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDL 413

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T   +L ACS L +L      H  ++   F ++  + ++LI+ Y+KCG    A  VF++
Sbjct: 414 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 473

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D+VSWN+MI  Y  +G   +A+ LF  ++  G++P + TF+ +LS+CSHSGLV +G
Sbjct: 474 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F++M +++ I+P   H  CMVD+LGRAG ++ A  FI N+P +P   IW  L +ACR
Sbjct: 534 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++ E +SK+I  L P+    +V LSN+Y+ AG   DA   R   K   + K PGC
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SWIE+   ++ F   ++SH ++ ++  KL++L+ +++ +G+            + EKE  
Sbjct: 654 SWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQI 713

Query: 711 VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +LYHSE+LA+ FG+++L A      ++ L 
Sbjct: 714 LLYHSEKLAIAFGILNLKAGRPILVTKNLR 743



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 226/462 (48%), Gaps = 3/462 (0%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K   + +L  C + + L   ++ H    K     D  V   L  +Y  C  +     +  
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P   +   N ++  YA N  FD A   +  +  + V+PN YTY  +L  C  L AI++
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G ++H+        S   V  AL+  Y KCG++ +A+ +F  +  R+V++W A+I G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G  +  ++L+  M+E+GI PN  T    L +    +    G   H   ++R    G  V
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GT ++DMY+    +  A+K    MG   + VSW+A I G+  +   +EA+E F QM+  D
Sbjct: 248 GTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306

Query: 417 AA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           A      T  S+L+AC+ L  L+   ++H  I+K     ++ +G++L+  Y KCG  +DA
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            R F  +   D VS+++++    QNG A  A+ +F  M + GI P  +T L VL ACSH 
Sbjct: 367 IRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHL 426

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             +Q G      ++   G   +    + ++D+  + GK+  A
Sbjct: 427 AALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFA 467



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  CS    L+ G   H  +       D  +  +L++MY+KCG I     V 
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   DI S N ++ GY  + L  +A   F  L  + ++P+  T+  +L+ C     + 
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 531

Query: 236 EGK-QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG+    A +     + +      ++ +  + G++++A      +  + +V  W+A+++ 
Sbjct: 532 EGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591

Query: 294 FKQHGDYE 301
            + H + E
Sbjct: 592 CRIHKNIE 599


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 204/620 (32%), Positives = 335/620 (54%), Gaps = 14/620 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           ++LG   H  + K+    D +V  +L+ MYAKCG ++    V + M   D  S N LL+G
Sbjct: 264 VKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSG 323

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             +N L+  A ++F  +     +P+  +   ++A  G    + +GK++HA  ++    S 
Sbjct: 324 LVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSN 383

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             + N L+ MY KC  ++     FE + ++++ISWT II G+ Q+  + + + L   ++ 
Sbjct: 384 MQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQV 443

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G+D +       L +C+ L++ +     H  V KR +A    +  AIV++Y  +G I  
Sbjct: 444 KGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDY 502

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A++  + + +S   VSW + I     N    EA+E F  + + +   D     S L A +
Sbjct: 503 ARRAFESI-RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L SL   ++IH  +++  F     + SSL++ Y  CG+ E++ ++F  +   D++ W S
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI A   +G   KAI LF+KM  + + P + TFLA+L ACSHSGL+ +G++ FE M   Y
Sbjct: 622 MINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGY 681

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            + P   HY+CMVDLL R+  LE A  F+ N+PIKP++ IW  L  AC  HS+ ++ E  
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELA 741

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +K++L+ D +++  Y  +SN++A  G   D EE R  MK   + K PGCSWIEV NKI+ 
Sbjct: 742 AKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHT 801

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIG-----------HTDNEKEDRVLY-HSERLAV 720
           F +++KSH +   +Y KL Q  + +E  G           +   E++ ++LY HSERLA+
Sbjct: 802 FMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLAL 861

Query: 721 GFGLISLPAKNKFECSRTLE 740
           G+GL+  P       ++ L 
Sbjct: 862 GYGLLVTPKGTCIRITKNLR 881



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 242/517 (46%), Gaps = 18/517 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   + L  G++ HAL+ K+ +    F+   LV MY KCG ++  V V  +M    
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N L+  +  +  + +A   +  +  + V  +  T+ ++L  CG+L     G ++H 
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDY 300
             +K  Y     V NAL+ MY KCG +  A  +F+G++  + + +SW +II+     G+ 
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L L   M+E G+  N YTF  AL          +G   H  V+K       +V  A+
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G + +A +  + M      VSWN  ++G  +N+   +A+  F  M  +    D
Sbjct: 290 IAMYAKCGRMEDAGRVFESM-LCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPD 348

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + +  +++ A     +L   +++H+  +++  +SN+ +G++L++ Y KC   +     F 
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFE 408

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D++SW ++I  Y+QN    +AI LF K+ V+G+        +VL AC  SGL   
Sbjct: 409 CMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--SGL--- 463

Query: 541 GQKVFESMVKEYGI---LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
             + F   +  Y     L +    + +V++ G  G ++ A     ++  K     W  + 
Sbjct: 464 KSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVS-WTSMI 522

Query: 598 AACRCHSDLKMAE---FISKQILELDPDDAAVYVTLS 631
             C  H+ L +     F S +   + PD  A+   LS
Sbjct: 523 TCC-VHNGLPVEALELFYSLKQTNIQPDSIAIISALS 558



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/569 (25%), Positives = 254/569 (44%), Gaps = 23/569 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK--QMPY 180
           VL  C       LG   H +  K       FV  +L+ MY KCGD+     +     M  
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +++ +       +A S F ++  + V  N YT+   L      S +  G  +
Sbjct: 211 EDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K  + +   V+NAL+ MY KCG MEDA  VFE ++ R+ +SW  +++G  Q+  Y
Sbjct: 271 HGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELY 330

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L     M+  G  P++ +    +A+     N   G   HA  I+ G+     +G  +
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390

Query: 361 VDMYSG------LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           VDMY+       +G  +E   + K++      +SW   IAG+ +N+   EAI  F ++  
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHE-KDL------ISWTTIIAGYAQNEFHLEAINLFRKVQV 443

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D     S+L+ACS L S     +IH  + K    +++ + ++++  Y + G  + 
Sbjct: 444 KGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDY 502

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A R F  + + D+VSW SMI     NG   +A+ LF  +    I+P +   ++ LSA ++
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              ++ G+++   ++++ G   E    S +VD+    G +E +     ++  +    +W 
Sbjct: 563 LSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLI-LWT 620

Query: 595 PLFAACRCHSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
            +  A   H     A  + K++ + +   D   ++ L    + +GL  + +   ++MK  
Sbjct: 621 SMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYG 680

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
               EP   W E Y  +    S++ S  E
Sbjct: 681 -YQLEP---WPEHYACMVDLLSRSNSLEE 705



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 166/333 (49%), Gaps = 3/333 (0%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + +S +L +C +  A+ +G+QLHA  +K  +LS   ++  L+ MY KCG + DA  VF+ 
Sbjct: 47  HAHSLLLDLCVAAKALPQGQQLHALLLK-SHLS-AFLATKLVLMYGKCGSLRDAVKVFDE 104

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R + SW A++  F   G Y + + L   MR  G+  +  TF   L +C +L  S +G
Sbjct: 105 MSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLG 164

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFF 397
              H   +K G     FV  A++ MY   G++  A+      M +   +VSWN+ I+   
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
                 EA+  F +M     A + +T+ + L+       +     IH  ++KS   ++V+
Sbjct: 225 AEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVY 284

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V ++LI  Y KCG  EDA RVF  +   D VSWN+++    QN     A+  F  M   G
Sbjct: 285 VANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSG 344

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +P   + L +++A   SG +  G++V    ++
Sbjct: 345 QKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIR 377



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 157/319 (49%), Gaps = 6/319 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +++   R   L  G+  HA   +  +  +  +  +LV+MYAKC  +K M    
Sbjct: 348 DQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAF 407

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD--GIDVQPNHYTYSTMLAICGSLSA 233
           + M   D+ S   ++AGYA+N    +A + F K+   G+DV P      ++L  C  L +
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDP--MMIGSVLRACSGLKS 465

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            +  +++H    K + L+   + NA++ +Y + G ++ A   FE +  ++++SWT++I  
Sbjct: 466 RNFIREIHGYVFK-RDLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITC 524

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
              +G   + L L   +++  I P+      AL++ A+L +   G   H  +I++G  L 
Sbjct: 525 CVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLE 584

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             + +++VDMY+  G +  ++K    + K    + W + I     +    +AI  F +M 
Sbjct: 585 GPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNKAIALFKKMT 643

Query: 414 RNDAACDEFTYSSILKACS 432
             +   D  T+ ++L ACS
Sbjct: 644 DQNVIPDHITFLALLYACS 662



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +I  LS  +    L+ G+  H  + +     +  + +SLV+MYA CG +++   + 
Sbjct: 549 DSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMF 608

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+     ++     +   ++A + F K+   +V P+H T+  +L  C     + 
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMV 668

Query: 236 EGKQLHAQTMKLQY 249
           EGK+   + MK  Y
Sbjct: 669 EGKRFF-EIMKYGY 681


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 208/639 (32%), Positives = 338/639 (52%), Gaps = 55/639 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D  F+ +  +     +CL      HAL+         F++  LVN+YA  GD+      
Sbjct: 20  IDFNFLFDSSTKTPFAKCL------HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCT 73

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSA 233
             Q+P  D+ + N +++ Y  N  F +A   F +L  + +++P+ YT+  +L  CG+L  
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLV- 132

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +G+++H    KL +     V+ +L+ MY + G    A S+F+ +  R++ SW A+I+G
Sbjct: 133 --DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISG 190

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G+  + L ++  MR +GI  N  T    L                           
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP-------------------------- 224

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                  VDMY+ LG +  A K   E+      +SWN  I G+ +N    EAIE +  M 
Sbjct: 225 -----VFVDMYAKLGLLDSAHKVF-EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME 278

Query: 414 R-NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
              +   ++ T+ SIL A + + +L    +IH R++K+    +V V + LI+ Y KCG  
Sbjct: 279 ECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRL 338

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            DA  +F Q+     V+WN++I  +  +G A K + LF +M+ EG++P + TF+++LSAC
Sbjct: 339 VDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSAC 398

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SHSG V++G+  F  M +EYGI P   HY CMVDLLGRAG LE+A  FI ++P++P A I
Sbjct: 399 SHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASI 457

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L  ACR H ++++ +F S ++ E+D  +   YV LSN+YA  G     ++ R L + 
Sbjct: 458 WGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARE 517

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
           + + K PG S IEV  K+  F++ N+SH +  ++YE+L+ L  +++ +G+          
Sbjct: 518 RGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQD 577

Query: 704 --DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             ++EKE  +  HSERLA+ FG+IS P K+     + L 
Sbjct: 578 VEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLR 616



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 23/288 (7%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +E  ++ +  + +  P  A C  +H+ +V +    ++ + + L+  Y   G    +   F
Sbjct: 18  EEIDFNFLFDSSTKTP-FAKC--LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTF 74

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAI-ILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
            Q+   DV +WNSMI AY  NG   +AI   ++ ++V  IRP   TF  VL AC   G +
Sbjct: 75  DQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTL 131

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            DG+K+      + G        + ++ +  R G   IA     ++P +     W  + +
Sbjct: 132 VDGRKI-HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS-WNAMIS 189

Query: 599 ACRCHSDLKMA-EFISKQILELDPDDAAVYVTL----SNMYAEAGLQADAEEQRKLMKMK 653
               + +   A + + +  LE    +    V++     +MYA+ GL   A +  +++ +K
Sbjct: 190 GLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVK 249

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           ++      SW    N +   ++QN   SE  +VY+ +++  + I + G
Sbjct: 250 DV-----ISW----NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQG 288


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 187/575 (32%), Positives = 321/575 (55%), Gaps = 1/575 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS  E L+ GR+ H  + K     D +V  SL+ MYAK G ++    V  Q+   ++   
Sbjct: 254 CSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR 313

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +++ +  N     A   + K+   +   + +T S++L+ C  + + D G+ +HA+ +K
Sbjct: 314 NAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIK 373

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
               S  A+ +ALLTMY KCG  EDA+SVF  + +R+V++W ++I GF Q+  ++  L L
Sbjct: 374 RSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDL 433

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M ++G+  +    T  +++   L N  +G++ H   IKRG+    FV  ++VDMYS 
Sbjct: 434 FRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSK 493

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G    A+     M  + + V+WN+ I+ +  N   E +I    Q++++    D  + ++
Sbjct: 494 FGFAESAEMVFSSM-PNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITT 552

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L A S + +L   + +H+  ++ +  S++ V ++LI+ Y KCG  + A+ +F  +   +
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 612

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +V+WNSMI  Y  +G   +A+ LF++M      P   TFLA++++CSHSG+V++G  +F+
Sbjct: 613 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQ 672

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M  EYG+ P   HY+ +VDLLGRAG+L+ A  FI  +PI     +W  L  ACR H ++
Sbjct: 673 LMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNM 732

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++ E ++  +L+++P   + YV L N+Y E  +   A   R  MK + + K PGCSWIEV
Sbjct: 733 ELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEV 792

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            N++  FFS + S +   ++Y+ L  L   +E  G
Sbjct: 793 KNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 236/503 (46%), Gaps = 30/503 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM---- 178
           +L  C+    L  GR  HA I    +  D ++  SL+NMY KCG + S + V  +M    
Sbjct: 61  LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 120

Query: 179 -PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
               DI   N ++ GY K   F++  + F ++                     LS    G
Sbjct: 121 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ-------------------ELSWYMAG 161

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQ 296
           +Q+H   ++  +     +  AL+ MY  C    +A S+F  L  R N+++W  +I GF +
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G +EK L L  L + +       +FT A  +C+       G   H  VIK       +V
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            T+++ MY+  G + +AKK   ++      +  NA I+ F  N +  +A+  +++M   +
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELR-NAMISAFIGNGRAYDALGLYNKMKAGE 340

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D FT SS+L  CS++ S      +H+ ++K   +SNV + S+L+  Y KCGS EDA+
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF  +   DVV+W SMI  + QN R + A+ LF  M  EG++  +    +V+SA     
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            V+ G  +    +K    L  +   +C +VD+  + G  E A +  S++P K     W  
Sbjct: 461 NVELGHLIHGFAIKRG--LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVA-WNS 517

Query: 596 LFAACRCHSDLKMAEFISKQILE 618
           + +    +   +M+  +  QIL+
Sbjct: 518 MISCYSWNGLPEMSINLLPQILQ 540



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 177/374 (47%), Gaps = 28/374 (7%)

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S N  +    +   + QA     K     +    +T+ ++L  C SLS +  G+ +HA  
Sbjct: 22  SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-----NVISWTAIINGFKQHGD 299
           + +   S   ++ +L+ MY+KCG++  A  VF+ + +      ++  W  +I+G+ ++G 
Sbjct: 82  VTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH 141

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGT 358
           +E+ L   C M+E                   L     G   H  +I R M  GD ++ T
Sbjct: 142 FEEGLAQFCRMQE-------------------LSWYMAGRQIHGYII-RNMFEGDPYLET 181

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MYS      EA     ++   ++ V+WN  I GF  N   E+++E +S     +  
Sbjct: 182 ALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCK 241

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               +++    ACS    L    Q+H  ++K  F+ + +V +SL+  Y K GS EDA++V
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKV 301

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGL 537
           F Q+   +V   N+MI A+  NGRA  A+ L+ KM   G  P +S T  ++LS CS  G 
Sbjct: 302 FDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKA-GETPVDSFTISSLLSGCSVVGS 360

Query: 538 VQDGQKVFESMVKE 551
              G+ V   ++K 
Sbjct: 361 YDFGRTVHAEVIKR 374



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 161/321 (50%), Gaps = 1/321 (0%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E+ +D   +  +LS CS     + GR  HA + K ++  +  + ++L+ MY KCG  +  
Sbjct: 340 ETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDA 399

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            +V   M   D+ +   ++AG+ +N  F  A   F  ++   V+ +    +++++    L
Sbjct: 400 DSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGL 459

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             ++ G  +H   +K    S   V+ +L+ MY K G  E AE VF  +  +N+++W ++I
Sbjct: 460 ENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 519

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + +  +G  E  + L+  + + G   +  + T  L + +S+     G   HA  I+  + 
Sbjct: 520 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIP 579

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               V  A++DMY   G +  A+   + M +  + V+WN+ IAG+  +   EEA+  F +
Sbjct: 580 SDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMIAGYGSHGNCEEAVRLFKE 638

Query: 412 MVRNDAACDEFTYSSILKACS 432
           M R++ A DE T+ +++ +CS
Sbjct: 639 MKRSETAPDEVTFLALITSCS 659



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 44/345 (12%)

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           ++   + ++  S S N++I    +  K  +A+E  S+   +     +FT+ S+LK C+ L
Sbjct: 9   RKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASL 68

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-----TAADVVS 489
            +L     IH+ IV    +S+ ++ +SLI  Y KCG    A +VF ++     +A D+  
Sbjct: 69  SNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITV 128

Query: 490 WNSMIKAYSQNGRARKAIILFEKM-------------------VVEGIRPTNSTFLAVLS 530
           WN +I  Y + G   + +  F +M                   + EG     +  + + S
Sbjct: 129 WNPVIDGYFKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYS 188

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS---NLPIK 587
           +CS      +   +F  +     I+     ++ M+      G  E +L   S   N   K
Sbjct: 189 SCSRP---MEAWSLFGKLENRSNIVA----WNVMIGGFVENGMWEKSLELYSLAKNENCK 241

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQ 646
             +  +   F AC     L     +   +++++  DD  V  +L  MYA++G   DA++ 
Sbjct: 242 LVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKV 301

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
              +  KE         +E+ N +   F  N    +   +Y K+K
Sbjct: 302 FDQVLDKE---------VELRNAMISAFIGNGRAYDALGLYNKMK 337



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   +  VL   S    L  G+  HA   +  +  D  V  +L++MY KCG +K    +
Sbjct: 545 LDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLI 604

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + MP  ++ + N ++AGY  +   ++A   F ++   +  P+  T+  ++  C     +
Sbjct: 605 FENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMV 664

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG  L  Q M+++Y  +  + +  +++ +  + G ++DA S   G+ +  +   W  ++
Sbjct: 665 EEGLNLF-QLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLL 723

Query: 292 NGFKQHGDYE 301
              + H + E
Sbjct: 724 FACRAHRNME 733


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 193/590 (32%), Positives = 319/590 (54%), Gaps = 5/590 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D   ++ V+  C+   CL LG + H L  K  +  D F+  +L+NMY+  G ++S  A+
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS-A 233
              +P  D A  N +++ Y       +A + F+K+    ++ +  T + ML++C  L+  
Sbjct: 320 FNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDG 379

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G+ LHA  MK        + NALL+MY+K   +  A+ VFE +   +VISW  +I+ 
Sbjct: 380 SIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISA 439

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F Q     K   L  +M E  I  N YT    LA C    +   G   H   IK G+ + 
Sbjct: 440 FAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEIN 499

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             + T++ +MY   G+   A        +    VSWN+ I+ + +N    +A+  F+ M+
Sbjct: 500 TSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMI 558

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGS 471
            ++   +  T  +IL +C+ L  L   + +H+   + +   E +  + ++ I  Y +CG 
Sbjct: 559 -SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            + AE++F  L    +VSWN+MI  Y  +GR R A + F +M+ +G +P N +F +VLSA
Sbjct: 618 LQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSA 677

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSHSGL   G ++F SMV+++GI P+  HY CMVDLLGR G    A+ FI+++PI+P A 
Sbjct: 678 CSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDAS 737

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IWR L ++C+  S+ K+ E I  +++EL+P +   ++ LSN+YA AGL ++  + RK ++
Sbjct: 738 IWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLR 797

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            + + K PG SWI + N+++ F + +  H +  ++YE L  L   I D+G
Sbjct: 798 ERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 4/431 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C R   +  G R H+ I    +  D  V  +LV+ Y KCG +     V  +MP  D
Sbjct: 66  VLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERD 125

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++GY     + +A   F+++    + PN  T   +L  CG +  +  G+++H 
Sbjct: 126 LVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHG 185

Query: 243 QTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++       A V  AL+  Y++   +  +  VF  ++ RN++SW AII GF   GD  
Sbjct: 186 YCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCA 244

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K L+L   M  +GI  +  T  V + +CA      +G   H   IK  +    F+  A++
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G + E+   L     ++ +  WN+ I+ +       EAI  F +M       D 
Sbjct: 305 NMYSDNGSL-ESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDV 363

Query: 422 FTYSSILKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            T + +L  C+ L   +   + +H+  +KS  E + ++G++L+  Y K      A+ VF 
Sbjct: 364 RTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   DV+SWN+MI A++Q+    KA  LF  M    I+  + T +++L+ C     +  
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483

Query: 541 GQKVFESMVKE 551
           G+ +    +K 
Sbjct: 484 GRSIHGFAIKN 494



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
            S + +++ + + P+  T   +L  CG L+AI  G ++H+    L  ++   V  AL+  
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDF 104

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KCG++ +A  VF  + +R+++SW A+I+G+     Y++ + L   M++ G+ PN  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMG 381
              L +C  +    +G   H   ++ G+   D +VGTA+V  Y     +     ++  + 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV--LSHRVFSLM 222

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
              + VSWNA I GF       +A++ +S M+      D  T   +++AC+    L    
Sbjct: 223 LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H   +K    +++ + ++L+  Y+  GS E +  +F+ +  +D   WNSMI +Y   G
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
              +AI LF KM +E I+    T   +LS C+
Sbjct: 343 FHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 84/159 (52%)

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           S  WN+ I    + +     +  ++QM       D  T   +LKAC  L ++    +IHS
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I      ++V VG++L++ Y KCG   +A +VF ++   D+VSWN++I  Y      ++
Sbjct: 85  FIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A++LF +M   G+ P + T +A+L AC     ++ GQ++
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEI 183


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 192/599 (32%), Positives = 335/599 (55%), Gaps = 1/599 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ E  L  G + H+L  K  +  +  V  +L++MYAKC  +     + + +P  D+
Sbjct: 249 LSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDL 308

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++G  +N L D+A   F  +     +P+  T  ++L     L+ + +GK++H  
Sbjct: 309 VTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGY 368

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++        + +AL+ +Y KC  +  A ++++     +V+  + +I+G+  +G  EK 
Sbjct: 369 IIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKA 428

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L++   + E  I PN  T    L +CAS+    +G   H  V++       +V +A++DM
Sbjct: 429 LQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDM 488

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G +  +     +M      V+WN+ I+ F +N + +EA++ F QM       +  T
Sbjct: 489 YAKCGRLDLSHYIFSKMSLK-DEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVT 547

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SS L AC+ LP++   ++IH  I+K   ++++   S+LI+ Y KCG+ E A RVF  + 
Sbjct: 548 ISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMP 607

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + VSWNS+I AY  +G  ++++    +M  EG +P + TFLA++SAC+H+GLV++G +
Sbjct: 608 DKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQ 667

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F+ M KEY I P   H++CMVDL  R+G+L+ A+ FI+++P KP A IW  L  ACR H
Sbjct: 668 LFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVH 727

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++A+  S+++ +LDP ++  YV +SN+ A AG      + R+LMK  +I K PG SW
Sbjct: 728 RNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSW 787

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGF 722
           ++V N  + F + +KSH E   +Y  LK L+Q++ + G+         ++      VGF
Sbjct: 788 VDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLCHPMHPDNNTQVGF 846



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 267/528 (50%), Gaps = 10/528 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+  C+    + LGR  H     T +  D +V ++L+ MY+  G ++      
Sbjct: 140 DAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAF 199

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP+ D    N ++ GY K      A   F  +     +PN  T +  L++C + + + 
Sbjct: 200 DGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLL 259

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH+  +K     + AV+N LL+MY KC  ++DA  +FE L + ++++W  +I+G  
Sbjct: 260 SGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCV 319

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  ++ L L C M   G  P+  T    L +   L     G   H  +I+  + +  F
Sbjct: 320 QNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAF 379

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A+VD+Y    ++  A + L +  ++   V  +  I+G+  N  +E+A++ F  ++  
Sbjct: 380 LVSALVDIYFKCRDVRTA-RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQ 438

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T +S+L AC+ + +L   ++IH  ++++ +E   +V S+L++ Y KCG  + +
Sbjct: 439 CIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLS 498

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +FS+++  D V+WNSMI ++SQNG  ++A+ LF +M +EGI+  N T  + LSAC+  
Sbjct: 499 HYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASL 558

Query: 536 GLVQDGQKVFESMVK---EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             +  G+++   ++K   +  I  E A    ++D+  + G +E+AL     +P K     
Sbjct: 559 PAIYYGKEIHGVIIKGPIKADIFAESA----LIDMYAKCGNMELALRVFEFMPDKNEVS- 613

Query: 593 WRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           W  + +A   H  +K +  F+ +   E    D   ++ L +  A AGL
Sbjct: 614 WNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGL 661



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 221/481 (45%), Gaps = 20/481 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQ---FVTASLVNMYAKCGDIKSMVAVVK 176
           ++ +L  C     L LG + HA    +    +     +   L+ MY      +  VAV  
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 177 QMPYLDIASC---NCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSL 231
            +P     S    N L+ G+        A  F++K+        P+ +T   ++  C +L
Sbjct: 95  ALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            A+  G+ +H         S   V +AL+ MY   G++ DA   F+G+  R+ + W  ++
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+ + GD    +RL   MR  G +PN  T    L+ CA+  +   G   H+  +K G+ 
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLE 274

Query: 352 LGDFVGTAIVDMYSG---LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
               V   ++ MY+    L + W    +L E+      V+WN  I+G  +N   +EA+  
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAW----RLFELLPRDDLVTWNGMISGCVQNGLLDEALGL 330

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  M+R+ A  D  T  S+L A + L  L   +++H  I+++    +  + S+L++ Y K
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           C     A  ++    A DVV  +++I  Y  NG + KA+ +F  ++ + I+P   T  +V
Sbjct: 391 CRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASV 450

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIALIFISNLPI 586
           L AC+    +  GQ++   +++      E   Y  S ++D+  + G+L+++    S + +
Sbjct: 451 LPACASISALPLGQEIHGYVLRNAY---EGKCYVESALMDMYAKCGRLDLSHYIFSKMSL 507

Query: 587 K 587
           K
Sbjct: 508 K 508



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 23/309 (7%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C+    L LG+  H  + + A  G  +V ++L++MYAKCG +     +  +M 
Sbjct: 447 VASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMS 506

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N +++ +++N    +A   F ++    ++ N+ T S+ L+ C SL AI  GK+
Sbjct: 507 LKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKE 566

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K    +     +AL+ MY KCG ME A  VFE +  +N +SW +II+ +  HG 
Sbjct: 567 IHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGL 626

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
            ++ +  +  M+E+G  P+  TF   +++CA           HA +++ G+ L   +   
Sbjct: 627 VKESVSFLHRMQEEGYKPDHVTFLALISACA-----------HAGLVEEGLQLFQCMTKE 675

Query: 358 ----------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                       +VD+YS  G + +A + + +M     +  W A +     ++  E A  
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735

Query: 408 AFSQMVRND 416
           A  ++ + D
Sbjct: 736 ASQELFKLD 744


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 331/629 (52%), Gaps = 14/629 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C     ++LG + HA I K+    D +V  +LV MY + G +     +   +   DI
Sbjct: 167 LQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDI 226

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +L G+ +N L+ +A  FF  L   D++P+  +  +++   G L  +  GK++HA 
Sbjct: 227 VTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAY 286

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K  + S   V N L+ MY KC  M      F+ +  +++ISWT    G+ Q+  Y + 
Sbjct: 287 AIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQA 346

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L L+  ++ +G+D +       L +C  L         H   I+ G++    +   I+D+
Sbjct: 347 LELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDV 405

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G I  A +  + + +    VSW + I+ +  N    +A+E FS M       D  T
Sbjct: 406 YGECGIIDYAVRIFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVT 464

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
             SIL A   L +L   ++IH  I++  F     + ++L++ Y +CGS EDA ++F+   
Sbjct: 465 LVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTK 524

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +++ W +MI AY  +G    A+ LF +M  E I P + TFLA+L ACSHSGLV +G+ 
Sbjct: 525 NRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKS 584

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
             E M  EY + P   HY+C+VDLLGR   LE A   + ++  +PT  +W  L  ACR H
Sbjct: 585 FLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIH 644

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
           S+ ++ E  ++++LELD D+   YV +SN++A  G   D EE R  MK   ++K PGCSW
Sbjct: 645 SNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSW 704

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKED-RVL 712
           IEV NKI+ F S++K H E  K+Y+KL Q+ ++++  G          H   E+E  ++L
Sbjct: 705 IEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQML 764

Query: 713 Y-HSERLAVGFGLISLPAKNKFECSRTLE 740
           Y HSERLA+ +GL++         ++ L 
Sbjct: 765 YGHSERLAIAYGLLATAEGTPIRVTKNLR 793



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 262/574 (45%), Gaps = 14/574 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           +L  C   E L  G   H L  K       FV  SLV +YAKC DI     +  +M Y+ 
Sbjct: 64  LLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM-YVR 122

Query: 182 -DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N +++ Y+ N +  +A   F ++    V  N YT++  L  C   S I  G Q+
Sbjct: 123 NDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQI 182

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  +K   +    V+NAL+ MY++ G M +A  +F  L  +++++W +++ GF Q+G Y
Sbjct: 183 HAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLY 242

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L     ++   + P++ +    + +   L     G   HA  IK G      VG  +
Sbjct: 243 SEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTL 302

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+    +    +    M      +SW    AG+ +N+   +A+E   Q+       D
Sbjct: 303 IDMYAKCCCMSYGGRAFDLMAHK-DLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVD 361

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                SIL AC  L  L   ++IH   ++      V + +++I+ Y +CG  + A R+F 
Sbjct: 362 ATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFE 420

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   DVVSW SMI  Y  NG A KA+ +F  M   G+ P   T +++LSA      ++ 
Sbjct: 421 SIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKK 480

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+++   ++++ G + E +  + +VD+  R G +E A   I          +W  + +A 
Sbjct: 481 GKEIHGFIIRK-GFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAY 538

Query: 601 RCH--SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
             H   +  +  F+  +  ++ PD    ++ L    + +GL  + +   ++MK  E   E
Sbjct: 539 GMHGYGEAAVELFMRMKDEKIIPDHIT-FLALLYACSHSGLVNEGKSFLEIMKC-EYQLE 596

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           P   W E Y  +     +     E  ++ + ++ 
Sbjct: 597 P---WPEHYTCLVDLLGRRNCLEEAYQIVKSMQN 627



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 228/477 (47%), Gaps = 13/477 (2%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCG +     +  +M    I + N ++ GY  N     A   + ++  + V  + YT
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +  +L  CG +  +  G ++H   +K    S   V N+L+ +Y KC  +  A  +F+ + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 281 QRN-VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            RN V+SW +II+ +  +G   + L L   M + G+  N YTF  AL +C       +G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             HA ++K G  L  +V  A+V MY   G++ EA      + +    V+WN+ + GF +N
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL-EGKDIVTWNSMLTGFIQN 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               EA+E F  +   D   D+ +  SI+ A   L  L   ++IH+  +K+ F+SN+ VG
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++LI+ Y KC       R F  +   D++SW +    Y+QN    +A+ L  ++ +EG+ 
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
              +   ++L AC     +   +++    ++  G L +    + ++D+ G  G ++ A+ 
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIR--GGLSDPVLQNTIIDVYGECGIIDYAVR 417

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDL---KMAEFISKQILELDPDDAAVYVTLSNM 633
              ++  K     W  +  +C  H+ L    +  F S +   L+PD    YVTL ++
Sbjct: 418 IFESIECKDVVS-WTSMI-SCYVHNGLANKALEVFSSMKETGLEPD----YVTLVSI 468



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 184/386 (47%), Gaps = 24/386 (6%)

Query: 52  FNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSL 111
           F K P+ A      +IF    N+E K I         +S   GFI +G  +      Y L
Sbjct: 208 FGKMPEAA------VIFG---NLEGKDI------VTWNSMLTGFIQNGLYSEALEFFYDL 252

Query: 112 ESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           ++     D+  +I ++    R   L  G+  HA   K     +  V  +L++MYAKC  +
Sbjct: 253 QNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCM 312

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLA 226
                    M + D+ S     AGYA+N  + QA      L+++G+DV        ++L 
Sbjct: 313 SYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDAT--MIGSILL 370

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C  L+ + + K++H  T++   LS   + N ++ +Y +CG+++ A  +FE +  ++V+S
Sbjct: 371 ACRGLNCLGKIKEIHGYTIR-GGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVS 429

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WT++I+ +  +G   K L +   M+E G++P+  T    L++  SL     G   H  +I
Sbjct: 430 WTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFII 489

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           ++G  L   +   +VDMY+  G + +A K +    K+ + + W A I+ +  +   E A+
Sbjct: 490 RKGFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMHGYGEAAV 548

Query: 407 EAFSQMVRNDAACDEFTYSSILKACS 432
           E F +M       D  T+ ++L ACS
Sbjct: 549 ELFMRMKDEKIIPDHITFLALLYACS 574



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 73/158 (46%), Gaps = 4/158 (2%)

Query: 95  FIDDGCSNTVPVTCYSL-ESLLDKQFV--IEVLSYCSREECLELGRRYHALITKTAVCGD 151
           ++ +G +N       S+ E+ L+  +V  + +LS       L+ G+  H  I +     +
Sbjct: 437 YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILE 496

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
             ++ +LV+MYA+CG ++    +       ++     +++ Y  +   + A   F+++  
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKD 556

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
             + P+H T+  +L  C     ++EGK    + MK +Y
Sbjct: 557 EKIIPDHITFLALLYACSHSGLVNEGKSF-LEIMKCEY 593


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 204/659 (30%), Positives = 345/659 (52%), Gaps = 43/659 (6%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C +++    G+  H  I K   C D F    L+NMY K   +     +  +MP  + 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+ GYA++  F +A   F++L     + N + ++T+L +  S    + G  +HA 
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHAC 164

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             KL + S   V  AL+  Y  CG ++ A  VF+G++ ++++SWT ++  F ++  +++ 
Sbjct: 165 IFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEA 224

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L+L   MR  G  PN +TF     +C  L    +G   H   +K    L  +VG A++D+
Sbjct: 225 LKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDL 284

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G+I +A++  +E+ K    + W+  IA + ++ +++EA+E F QM +     ++FT
Sbjct: 285 YTKSGDIDDARRAFEEIPKK-DVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFT 343

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++S+L+AC+ +  L    QIH  ++K    S+V V ++L++ Y KCG  E++  +F++  
Sbjct: 344 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 403

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMV---VEG----------------------- 517
             + V+WN++I  + Q G   KA+ LF  M+   V+                        
Sbjct: 404 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ 463

Query: 518 -----IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
                ++P   TF+ VLSAC+++GL+  GQ  F SM++++GI P   HY+CMV LLGR G
Sbjct: 464 IHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGG 523

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
            L+ A+  I  +P +P+  +WR L  AC  H+D+++    ++++LE++P D A +V LSN
Sbjct: 524 HLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSN 583

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MYA A    +    RK MK K + KEPG SWIE    ++ F   + SH E+  +   L+ 
Sbjct: 584 MYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEW 643

Query: 693 LMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           L  + +  G+            D EKE  +  HSERLA+ FG+I  P+ +     + L 
Sbjct: 644 LHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLR 702



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 13/415 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L      +C ELG   HA I K     + FV  +L++ Y+ CG +     V   + Y D
Sbjct: 145 ILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKD 204

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++  +A+N  F +A   F ++  +  +PN++T++++   C  L A D GK +H 
Sbjct: 205 MVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHG 264

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K +Y     V  ALL +Y K G ++DA   FE + +++VI W+ +I  + Q    ++
Sbjct: 265 CALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKE 324

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + +   MR+  + PN++TF   L +CA++   ++G   H  VIK G+    FV  A++D
Sbjct: 325 AVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMD 384

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G + E   +L       + V+WN  I G  +    E+A+  F  M+       E 
Sbjct: 385 VYAKCGRM-ENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 443

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYSS L+AC+ L +L    QIHS  VK    + V V S+   A    G  +  +  F+ +
Sbjct: 444 TYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANA----GLLDQGQAYFTSM 499

Query: 483 TAADVVS-----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
                +      +  M+    + G   KA+ L +++     +P+   + A+L AC
Sbjct: 500 IQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGAC 551



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 187/369 (50%), Gaps = 2/369 (0%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N + Y+  L  C        GK LH + +K          N LL MY+K   + DA  +F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + + +RN IS+  +I G+ +   + + + L   +  +G + N + FT  L    S     
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGE 156

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G+  HA + K G     FVGTA++D YS  G + +  +++ +       VSW   +  F
Sbjct: 157 LGWGIHACIFKLGHESNAFVGTALIDAYSVCGRV-DVAREVFDGILYKDMVSWTGMVTCF 215

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N   +EA++ FSQM       + FT++S+ KAC  L +    + +H   +KS++E ++
Sbjct: 216 AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDL 275

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           +VG +L++ Y K G  +DA R F ++   DV+ W+ MI  Y+Q+ ++++A+ +F +M   
Sbjct: 276 YVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQA 335

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            + P   TF +VL AC+    +  G ++   ++K  G+  +    + ++D+  + G++E 
Sbjct: 336 LVLPNQFTFASVLQACATMEGLNLGNQIHCHVIK-IGLHSDVFVSNALMDVYAKCGRMEN 394

Query: 577 ALIFISNLP 585
           ++   +  P
Sbjct: 395 SMELFAESP 403



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 9/284 (3%)

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           N + +  AL  C        G   H +++KRG  L  F    +++MY     + +A K  
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            EM +  +++S+   I G+  + +  EAIE F ++ R     + F +++ILK   LL S 
Sbjct: 97  DEMPER-NTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILK---LLVST 152

Query: 438 ATCE---QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
              E    IH+ I K   ESN  VG++LI+AY+ CG  + A  VF  +   D+VSW  M+
Sbjct: 153 DCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMV 212

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             +++N   ++A+ LF +M + G +P N TF +V  AC        G+ V    +K    
Sbjct: 213 TCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYE 272

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           L      + ++DL  ++G ++ A      +P K   P W  + A
Sbjct: 273 LDLYVGVA-LLDLYTKSGDIDDARRAFEEIPKKDVIP-WSFMIA 314


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 185/551 (33%), Positives = 312/551 (56%), Gaps = 7/551 (1%)

Query: 132 CLELG-----RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+ELG     +  HA + K  +  D  + + LV MY++C   +    V  ++   D+  C
Sbjct: 262 CMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHC 321

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           + +++ + ++ +  +A   F+K+ G+ V+PNHY +  +  +       +  + +HA  +K
Sbjct: 322 SAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVK 381

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V +A+L MY+K G ++DA   F+ + + +  SW  I++ F    + E+ LR+
Sbjct: 382 SGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRI 441

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G   N+YT+   L  C SL N   G   HA ++K G+     V   +VDMY+ 
Sbjct: 442 FKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQ 501

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G    A    +++ K   + SW   ++G+ + ++ E+ +E F  M+R +    + T + 
Sbjct: 502 SGCFTSACLVFEQL-KERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAV 560

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            L  CS + SL +  Q+HS  +KS + S+V V  +L++ Y KCG+  DAE +F +    D
Sbjct: 561 SLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRD 619

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+WN++I  YSQ+G   KA+  F++MV EG RP   TF+ VLSACSH+GL+ +G+K F+
Sbjct: 620 QVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFK 679

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           S+   YGI P   HY+CMVD+L +AG+L  A   I+ +P+ P + IWR +  ACR H ++
Sbjct: 680 SLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNI 739

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++AE  ++++ EL+P DA+  + LSN+YA+ G  +D    R ++    + KEPGCSWIE+
Sbjct: 740 EIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEI 799

Query: 667 YNKIYRFFSQN 677
             +I+ F SQ+
Sbjct: 800 NGQIHMFLSQD 810



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 245/510 (48%), Gaps = 5/510 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G+  HA + ++A+  D F+  SL+NMY KCG +     V   MP+ DI
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            +   +++ +      DQA   F +++   + PN +T +++L  C   S      Q+H Q
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +KL  L    V ++L+  Y  CG ++ AE+V  GL +R+ +SW A++NG+ +HGDY + 
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + ++  +   G + ++YT    L  C  L  +  G   HA VIKRG+   + + + +V+M
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS      EA +    + +    V  +A I+ F R+    EA++ F +M       + + 
Sbjct: 297 YSRCLSAEEAYEVFIRIDE-PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  I    S       C  +H+ IVKS F     VG +++  Y K G+ +DA   F  + 
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D  SWN+++ A+       + + +F++M  EG      T+++VL  C+    ++ G +
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQ 475

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA-CRC 602
           V   ++K  G+  +      +VD+  ++G    A +    L  +  A  W  + +   + 
Sbjct: 476 VHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLK-ERDAFSWTVIMSGYAKT 533

Query: 603 HSDLKMAEFISKQILE-LDPDDAAVYVTLS 631
               K+ E+    + E + P DA + V+LS
Sbjct: 534 EEAEKVVEYFRSMLRENIRPSDATLAVSLS 563



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 210/429 (48%), Gaps = 3/429 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS     +   + H  + K     D +V +SLV  Y  CG++ +   V+  +P   
Sbjct: 157 VLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERS 216

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N LL GYA++  + +      KL     + + YT  T+L  C  L     G+ +HA
Sbjct: 217 DVSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHA 276

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K    +   +++ L+ MY +C   E+A  VF  + + +V+  +A+I+ F +H    +
Sbjct: 277 SVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWE 336

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            L L   M   G+ PN Y F V +A  AS   ++++    HA ++K G A+   VG AI+
Sbjct: 337 ALDLFVKMSGMGVKPNHYIF-VGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAIL 395

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MY  +G + +A     ++     + SWN  ++ F+     E+ +  F QM     + ++
Sbjct: 396 NMYVKVGAVQDATVTF-DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANK 454

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           +TY S+L+ C+ L +L    Q+H+ I+KS  +++  V   L++ Y + G +  A  VF Q
Sbjct: 455 YTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQ 514

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           L   D  SW  ++  Y++   A K +  F  M+ E IRP+++T    LS CS    +  G
Sbjct: 515 LKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSG 574

Query: 542 QKVFESMVK 550
            ++    +K
Sbjct: 575 LQLHSWAIK 583



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 202/396 (51%), Gaps = 3/396 (0%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           ++  L  C     +  G++LHA+ ++      T + ++LL MY KCG + DA  VF+G+ 
Sbjct: 53  HAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMP 112

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R++++WTA+I+     GD ++ L +   M ++GI PN +T    L +C+   +S   + 
Sbjct: 113 HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQ 172

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H QV+K       +VG+++V+ Y+  GE+  A+  L  + +  S VSWNA + G+ R+ 
Sbjct: 173 VHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPER-SDVSWNALLNGYARHG 231

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
                +    ++V +     ++T  ++LK C  L      + +H+ ++K   E++  + S
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            L+E Y++C S E+A  VF ++   DVV  ++MI  + ++  A +A+ LF KM   G++P
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            +  F+ +    S +G     + V   +VK  G    +     ++++  + G ++ A + 
Sbjct: 352 NHYIFVGIAGVASRTGDANLCRSVHAYIVKS-GFAMLKGVGDAILNMYVKVGAVQDATVT 410

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
             +L  +P    W  + +A    S+ +    I KQ+
Sbjct: 411 F-DLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQM 445


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 198/605 (32%), Positives = 333/605 (55%), Gaps = 17/605 (2%)

Query: 136  GRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            G+  HA + ++ +   +  +  +LVNMY KC  I +  +V + MP  D  S N +++G  
Sbjct: 474  GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533

Query: 195  KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
             N  F++A S F  +    + P++++  + L+ C SL  +  G+Q+H +  K       +
Sbjct: 534  HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 593

Query: 255  VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF-KQHGDYEKPLRLVCLMRED 313
            VSNALLT+Y +   + + + VF  + + + +SW + I    K      + L+    M + 
Sbjct: 594  VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 653

Query: 314  GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            G  PN  TF   LA+ +S     +G+  HA ++K  +A  + +  A++  Y    ++ + 
Sbjct: 654  GWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDC 713

Query: 374  KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            +     M +    VSWN+ I+G+  +    +A++    M++     D FT++++L AC+ 
Sbjct: 714  EIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACAS 773

Query: 434  LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
            + +L    ++H+  V++  ES+V VGS+L++ Y KCG  + A R F  +   ++ SWNSM
Sbjct: 774  VATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSM 833

Query: 494  IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
            I  Y+++G  +KA+ +F +M   G  P + TF+ VLSACSH GLV +G K F+SM + YG
Sbjct: 834  ISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYG 893

Query: 554  ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF-- 611
            + P   H+SCMVDLLGRAG ++    FI  +P+ P   IWR +  AC C ++ +  E   
Sbjct: 894  LSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGAC-CRANGRNTELGQ 952

Query: 612  -ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
              +K ++EL+P +A  YV LSNM+A  G   D  E R  M+   + K+ GCSW+ + + +
Sbjct: 953  RAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGV 1012

Query: 671  YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLYHSERLA 719
            + F + +++H E  K+YEKLK+LM +I D G+    K           E+ + YHSE+LA
Sbjct: 1013 HLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLA 1072

Query: 720  VGFGL 724
            + F L
Sbjct: 1073 IAFVL 1077



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 221/421 (52%), Gaps = 20/421 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + KT    D F   +L+N+Y + G++ S   +  +MP  ++ S +CL++GY +N + 
Sbjct: 163 HLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMP 222

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAI---CGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
           D+A S F  +    + PNH+   + L     CGS + I  G Q+HA   KL  +S   +S
Sbjct: 223 DEACSLFKGVISSGLLPNHFAVGSALRACQQCGS-TGIKLGMQIHAFICKLPCVSDMILS 281

Query: 257 NALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           N L++MY  C G ++DA  VF+ +  RN ++W +II+ + + GD     +L  +M+ +G+
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341

Query: 316 D----PNEYTFTVALASCASLRNSHMGYMFHAQVIKR----GMALGDFVGTAIVDMYSGL 367
           +    PNEYT    + +  SL +   G +   Q++ R    G     +VG+A+V+ ++  
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADC--GLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARY 399

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM---VRNDAACDEFTY 424
           G +  AK   K+M    ++V+ N  + G  R  + EEA + F +M   V  ++       
Sbjct: 400 GLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLL 458

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           S+  +  +L       +++H+ + +S   ++ + +G++L+  Y KC + ++A  VF  + 
Sbjct: 459 STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMP 518

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           + D VSWNSMI     N R  +A+  F  M   G+ P+N + ++ LS+CS  G +  G++
Sbjct: 519 SKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ 578

Query: 544 V 544
           +
Sbjct: 579 I 579



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 264/573 (46%), Gaps = 50/573 (8%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA +LF++ P++  +S S LI          G ++N       S   G I  G       
Sbjct: 193 SARKLFDEMPQKNLVSWSCLI---------SGYTQNRMPDEACSLFKGVISSG------- 236

Query: 107 TCYSLESLLDKQFVI-EVLSYCSREEC----LELGRRYHALITKTAVCGDQFVTASLVNM 161
                  LL   F +   L  C  ++C    ++LG + HA I K     D  ++  L++M
Sbjct: 237 -------LLPNHFAVGSALRAC--QQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSM 287

Query: 162 YAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGI--DVQP 216
           Y+ C G I     V  ++ + +  + N +++ Y +      AF  F  ++++G+  +++P
Sbjct: 288 YSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRP 347

Query: 217 NHYTYSTMLAICGSLSAIDEG----KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           N YT  +++    SL+  D G    +Q+  +  K  +L    V +AL+  + + G+M+ A
Sbjct: 348 NEYTLCSLVTAACSLA--DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCA 405

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           + +F+ +  RN ++   ++ G  +    E+  ++   M+ D ++ N  +  V L++    
Sbjct: 406 KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEF 464

Query: 333 RN----SHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
            N       G   HA + + G+      +G A+V+MY     I  A    + M  S  +V
Sbjct: 465 SNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM-PSKDTV 523

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SWN+ I+G   N++ EEA+  F  M RN      F+  S L +CS L  L    QIH   
Sbjct: 524 SWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEG 583

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ-NGRARKA 506
            K   + +V V ++L+  Y +  S  + ++VF Q+   D VSWNS I A ++      +A
Sbjct: 584 FKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQA 643

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           +  F +M+  G RP   TF+ +L+A S   ++  G ++  +++ +Y +  + A  + ++ 
Sbjct: 644 LKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQI-HALILKYSVADDNAIENALLA 702

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
             G+  ++E   I  S +  +     W  + + 
Sbjct: 703 FYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 29/433 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI  LS CS    L LGR+ H    K  +  D  V+ +L+ +YA+   I     V  QMP
Sbjct: 560 VISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP 619

Query: 180 YLDIASCNCLLAGYAK-NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D  S N  +   AK  A   QA  +FL++     +PN  T+  +LA   S S +  G 
Sbjct: 620 EYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGH 679

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQH 297
           Q+HA  +K       A+ NALL  Y KC  MED E +F  + + R+ +SW ++I+G+   
Sbjct: 680 QIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHS 739

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   K + LV  M + G   + +TF   L++CAS+     G   HA  ++  +     VG
Sbjct: 740 GILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVG 799

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY+  G+I +   +  E+    +  SWN+ I+G+ R+   ++A++ F++M ++  
Sbjct: 800 SALVDMYAKCGKI-DYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG------------SSLIEA 465
           + D  T+  +L ACS           H  +V   ++    +G            S +++ 
Sbjct: 859 SPDHVTFVGVLSACS-----------HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDL 907

Query: 466 YNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQ-NGRARKAIILFEKMVVEGIRPTNS 523
             + G  +  E     +    +++ W +++ A  + NGR  +      KM++E + P N+
Sbjct: 908 LGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIE-LEPQNA 966

Query: 524 TFLAVLSACSHSG 536
               +LS    +G
Sbjct: 967 VNYVLLSNMHAAG 979



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 199/426 (46%), Gaps = 28/426 (6%)

Query: 189 LLAGYAKNALFDQAFSF-FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           LL  Y     F + ++F   +L  +D + + Y  S         S++ +   LH Q  K 
Sbjct: 119 LLNKYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTS---------SSLYDANHLHLQLYKT 169

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
            +       N L+ +Y++ G +  A  +F+ + Q+N++SW+ +I+G+ Q+   ++   L 
Sbjct: 170 GFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLF 229

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNS--HMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
             +   G+ PN +    AL +C    ++   +G   HA + K        +   ++ MYS
Sbjct: 230 KGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYS 289

Query: 366 GL-GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM----VRNDAACD 420
              G I +A +   E+ K  +SV+WN+ I+ + R      A + FS M    V  +   +
Sbjct: 290 DCSGSIDDAHRVFDEI-KFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPN 348

Query: 421 EFTYSSILK-ACSLLP-SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           E+T  S++  ACSL    L   EQ+ +RI KS F  +++VGS+L+  + + G  + A+ +
Sbjct: 349 EYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 408

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL--SACSHSG 536
           F Q+   + V+ N ++   ++  +  +A  +F++M  + +   NS  L VL  +    S 
Sbjct: 409 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM--KDLVEINSESLVVLLSTFTEFSN 466

Query: 537 LVQ---DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           L +    GQ+V   + +   +    +  + +V++ G+   ++ A      +P K T   W
Sbjct: 467 LKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS-W 525

Query: 594 RPLFAA 599
             + + 
Sbjct: 526 NSMISG 531


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 193/575 (33%), Positives = 320/575 (55%), Gaps = 14/575 (2%)

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQP-NHYTYSTMLAICGSLSAIDE 236
           P L     N L+  +      + A   F++ L      P + +T +  L  C  + A+D 
Sbjct: 79  PPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDV 138

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+ + A  +K   ++   V ++L+ MY  CG +  A  VF+   +  V+ W AI+  + +
Sbjct: 139 GRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLK 198

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +GD+ + + +   M E G+  +E T    + +C  + ++ +G      V + G+A    +
Sbjct: 199 NGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKL 258

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            TA++DMY+  GEI +A++    M +S   V+W+A I+G+ +  +  EA+  FS+M    
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALGLFSEMQLAR 317

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              ++ T  S+L AC++L +L T + +HS + + +      +G++L++ Y KCG  +DA 
Sbjct: 318 VEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAV 377

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
             F  +   +  +W ++IK  + NGR R+A+ LF  M   GI PT+ TF+ VL ACSHS 
Sbjct: 378 EAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC 437

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV++G++ F+SM ++YGI P   HY CMVDLLGRAG ++ A  FI  +PI+P A IWR L
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRAL 497

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            ++C  H ++ + E   KQI+ L+P  +  YV LSN+YA AG   DA   RK MK + I 
Sbjct: 498 LSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIE 557

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN----------- 705
           K PGCS IE+   ++ FF+++  H E+ ++Y+K+++++ +I+  G+  N           
Sbjct: 558 KTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEER 617

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           EKE  V +HSE+LA+ FGL+ L        S+ L 
Sbjct: 618 EKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLR 652



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 154/317 (48%), Gaps = 1/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+      L  CSR   L++GR   A   K  +  D+FV +SL++MYA CGD+ +   V 
Sbjct: 119 DQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVF 178

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                  +   N ++A Y KN  + +    F  +  + V  +  T  +++  CG +    
Sbjct: 179 DAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAK 238

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +     +        +  AL+ MY KCG +  A  +F+G+  R+V++W+A+I+G+ 
Sbjct: 239 LGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYT 298

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q     + L L   M+   ++PN+ T    L++CA L     G   H+ V ++ ++L   
Sbjct: 299 QADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTI 358

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +GTA+VD Y+  G I +A +  + M    +S +W A I G   N +  EA+E FS M   
Sbjct: 359 LGTALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKGMATNGRGREALELFSSMREA 417

Query: 416 DAACDEFTYSSILKACS 432
                + T+  +L ACS
Sbjct: 418 GIEPTDVTFIGVLMACS 434



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 144/301 (47%), Gaps = 3/301 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D+  ++ V++ C R    +LG+     + +  +  +  +  +L++MYAKCG+I     +
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRL 278

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   D+ + + +++GY +     +A   F ++    V+PN  T  ++L+ C  L A+
Sbjct: 279 FDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGAL 338

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + GK +H+   + +    T +  AL+  Y KCG ++DA   FE +  +N  +WTA+I G 
Sbjct: 339 ETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGM 398

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G   + L L   MRE GI+P + TF   L +C+       G   H   + R   +  
Sbjct: 399 ATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMARDYGIKP 457

Query: 355 FVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            V     +VD+    G + EA + ++ M    ++V W A ++    ++      EA  Q+
Sbjct: 458 RVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQI 517

Query: 413 V 413
           +
Sbjct: 518 I 518


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 310/548 (56%), Gaps = 1/548 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +    S CS    +E GR+ H    +TA   D  V  +L+++Y KC  +     + 
Sbjct: 237 DRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLF 296

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   ++ S   ++AGY +N+L  +A S F +L     QP+ +  +++L  CGSL+AI 
Sbjct: 297 DSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIW 356

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA  +K    S   V NAL+ MY KC  + +A +VFE L + + IS+ A+I G+ 
Sbjct: 357 QGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYA 416

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + GD    + +   MR   + P+  TF   L   +S  +  +    H  ++K G +L  +
Sbjct: 417 RLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLY 476

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G+A++D+YS    + +AK     M ++   V WNA I G  +N++ EEA++ F+++  +
Sbjct: 477 AGSALIDVYSKFSLVDDAKLVFSLM-QNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVS 535

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EFT+ +++   S L S+   +Q H++I+K+  +S+ H+ ++LI+ Y KCG  E+ 
Sbjct: 536 GLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEG 595

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F      DV+ WNSMI  Y+Q+G A +A+ +F  M   G+ P   TF++VLSAC+H+
Sbjct: 596 RLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHA 655

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G   F SM  +Y + P   HY+ +V+L GR+GKL  A  FI  +PI+P A IWR 
Sbjct: 656 GLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRS 715

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +AC    ++++  + ++  L  DP D+   V +SN+YA  GL ADA++ R+ M    +
Sbjct: 716 LLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGV 775

Query: 656 SKEPGCSW 663
            KEPG SW
Sbjct: 776 VKEPGYSW 783



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 149/562 (26%), Positives = 272/562 (48%), Gaps = 12/562 (2%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
            +   L  C++      G + H +  K  +  + FV  +LVN+YAK G I + ++V   +
Sbjct: 139 LLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDAL 198

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  +  +   ++ GY++      A   F ++    V+P+ +  ++  + C  L  ++ G+
Sbjct: 199 PARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGR 258

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H    +    S  +V NAL+ +Y KC  +  A  +F+ +  RN++SWT +I G+ Q+ 
Sbjct: 259 QIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNS 318

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + + +   + + G  P+ +  T  L SC SL     G   HA VIK  +   ++V  
Sbjct: 319 LDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKN 378

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++DMY+    + EA+   + + +   ++S+NA I G+ R      A+E F +M      
Sbjct: 379 ALIDMYAKCEHLTEARAVFEALAED-DAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLK 437

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               T+ S+L   S    L   +QIH  IVKS    +++ GS+LI+ Y+K    +DA+ V
Sbjct: 438 PSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLV 497

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           FS +   D+V WN+MI   +QN R  +A+ LF ++ V G+ P   TF+A+++  S    +
Sbjct: 498 FSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASI 557

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIFISNLPIKPTAPIWRPLF 597
             GQ+ F + + + G   +    + ++D+  + G +E   L+F S L        W  + 
Sbjct: 558 FHGQQ-FHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTL--GKDVICWNSMI 614

Query: 598 A--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           +  A   H++  +  F   +   ++P +   +V++ +  A AGL  +       MK K  
Sbjct: 615 STYAQHGHAEEALHVFGMMEGAGVEP-NYVTFVSVLSACAHAGLVDEGLHHFNSMKTK-Y 672

Query: 656 SKEPGCSWIEVYNKIYRFFSQN 677
           + EPG    E Y  +   F ++
Sbjct: 673 AVEPGT---EHYASVVNLFGRS 691



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 198/417 (47%), Gaps = 7/417 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA    + +  D F+   L+  Y+K G +     +   MP  ++ S    ++ YA++   
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 200 DQAFSFFLKLDGIDVQ------PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           D A   F               PN +  ++ L  C    A   G+Q+H    KL   +  
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V  AL+ +Y K G ++ A SVF+ L  RN ++WTA+I G+ Q G     L L   M  D
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+ P+ +    A ++C+ L     G   H    +        V  A++D+Y     +  A
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           ++    M ++ + VSW   IAG+ +N    EA+  F Q+ +     D F  +SIL +C  
Sbjct: 293 RRLFDSM-ENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L ++    Q+H+ ++K+  ES+ +V ++LI+ Y KC    +A  VF  L   D +S+N+M
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAM 411

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           I+ Y++ G    A+ +F KM    ++P+  TF+++L   S    ++  +++   +VK
Sbjct: 412 IEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 198/613 (32%), Positives = 334/613 (54%), Gaps = 13/613 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G+  HA +       +  +  ++V+MY+KC  +   + V    P  D+     L++G
Sbjct: 234 LSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISG 293

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + +N    +A S F  ++   + PN++TYS++L    S+ ++D G+Q H++ + +     
Sbjct: 294 FTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDD 353

Query: 253 TAVSNALLTMYIKCG-MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             + NAL+ MY+KC  +  +A  VF  +   NV+ WT++I GF +    E   +L   M+
Sbjct: 354 LYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQ 412

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G+ PN +T +  L +C+  R+     M H  +IK  + +   V  A+VD Y+G+G I 
Sbjct: 413 AAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMID 472

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           EA   +  M     S+++    A   +      A++    M  +    DEF+ +S L A 
Sbjct: 473 EAWSVIGTMNLR-DSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAA 531

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L ++ T +Q+H   VKS F+    V +SL+  Y+KCGS  DA R F  ++  D  SWN
Sbjct: 532 AGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWN 591

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I  +S NG    A+  F+ M + G++P + T L+++SACSH GL++ G + F SM KE
Sbjct: 592 GLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKE 651

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           Y I P+  HY C+VDLLGR G+LE A+  I  +  KP + I + L  AC  H ++ + E 
Sbjct: 652 YHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGED 711

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
           ++++ LELDP D A+Y+ L+N+Y  AGL    E+ R+LM+ + + + PG  W+E+ ++++
Sbjct: 712 MARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVH 771

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPA-- 729
            F +  K + +  ++ EKL+ L+ +  +  +   E ED+  YH E+LAV FG+++ P+  
Sbjct: 772 HFSAGEKINED--EITEKLEFLITEFRNRRYQYQENEDK-FYHPEQLAVAFGVLNAPSTS 828

Query: 730 -----KNKFECSR 737
                KN   CS 
Sbjct: 829 PIRIYKNSLICSH 841



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 210/416 (50%), Gaps = 6/416 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VLS+C+    L+ G   H+ I K  +  D ++T +L+++YAK   +     +  +MP 
Sbjct: 19  LRVLSFCNSNS-LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPN 77

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S   +L+ + K      A   F  + G    PN +T S+ L  C +L   + G Q+
Sbjct: 78  RDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQI 137

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR--NVISWTAIINGFKQHG 298
           H   +KL       V  +L+  Y KCG           LV+   +V+SWT +++   ++G
Sbjct: 138 HCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENG 197

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            + +   +   M E G+ PNE+TF   L + +S      G + HA +I  G  L   + T
Sbjct: 198 KWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKT 257

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMYS    + +A K +  +        W   I+GF +N +  EAI  F  M  +   
Sbjct: 258 AVVDMYSKCRRMVDAIK-VSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL 316

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS-WEDAER 477
            + FTYSS+L A S + SL   EQ HSR++    E ++++G++L++ Y KC     +A +
Sbjct: 317 PNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVK 376

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           VF ++T+ +V+ W S+I  +++  R   +  LF +M   G+RP + T  A+L ACS
Sbjct: 377 VFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAILGACS 431



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 206/417 (49%), Gaps = 9/417 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCG----DIKSMVAVVKQMPYLDIASCNC 188
            E G + H    K  +  ++FV  SLV  Y KCG    +   ++++VK     D+ S   
Sbjct: 131 FERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG--DVVSWTT 188

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +L+   +N  + +AF  ++K+    V PN +T+  +L    S   +  GK LHA  +   
Sbjct: 189 MLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFG 248

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
                 +  A++ MY KC  M DA  V     + +V  WT +I+GF Q+    + + +  
Sbjct: 249 AELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFR 308

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G+ PN +T++  L + +S+ +  +G  FH++VI  G+    ++G A+VDMY    
Sbjct: 309 DMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCS 368

Query: 369 EI-WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
            I   A K  +E+  S + + W + IAG F  ++ E++ + F++M       + FT S+I
Sbjct: 369 HITTNAVKVFREI-TSPNVMCWTSLIAG-FAEKRLEDSFQLFAEMQAAGVRPNSFTMSAI 426

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L ACS   SL     +H  I+K+K + ++ V ++L++ Y   G  ++A  V   +   D 
Sbjct: 427 LGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDS 486

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           +++  +    +Q G    A+ +   M  +GI+    +  + LSA +  G ++ G+++
Sbjct: 487 ITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL 543



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 190/380 (50%), Gaps = 9/380 (2%)

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L+ C S +++ EG  +H+  +KL       ++N LL++Y K   +  A  +F+ +  R+
Sbjct: 21  VLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRD 79

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SWT I++   +   +   L+L  +M   G  PNE+T + AL SC +L     G   H 
Sbjct: 80  VVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHC 139

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLG----EIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             +K G+ +  FVGT++V+ Y+  G    E W+    +K+ G     VSW   ++    N
Sbjct: 140 SAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG---DVVSWTTMLSSLVEN 196

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            K  EA E + +M+ +    +EFT+  +L A S    L+  + +H+ ++    E N+ + 
Sbjct: 197 GKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLK 256

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +++++ Y+KC    DA +V +     DV  W ++I  ++QN + R+AI +F  M + G+ 
Sbjct: 257 TAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL 316

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P N T+ ++L+A S S L  D  + F S V   G+  +    + +VD+  +   +    +
Sbjct: 317 PNNFTYSSLLNASS-SILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAV 375

Query: 580 FISNLPIKPTAPIWRPLFAA 599
            +      P    W  L A 
Sbjct: 376 KVFREITSPNVMCWTSLIAG 395



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS+   L      H  I KT V  D  V  +LV+ YA  G I    +V+  M   D
Sbjct: 426 ILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRD 485

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +  CL A   +      A    + +    ++ + ++ ++ L+    L  ++ GKQLH 
Sbjct: 486 SITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHC 545

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  +    +VSN+L+ +Y KCG + DA   F+ + + +  SW  +I+GF  +G    
Sbjct: 546 YSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISH 605

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCA 330
            L     MR  G+ P+  T    +++C+
Sbjct: 606 ALSTFDDMRLAGVKPDSITLLSLISACS 633


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  358 bits (919), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 194/637 (30%), Positives = 347/637 (54%), Gaps = 17/637 (2%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F   +L +  RE  L+ G+R H+ I +T   GD+ V   +V MY KCGD++    V   +
Sbjct: 119 FTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI 178

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++ S   ++A YA+N    +      +++   V+P+ YT++T+L  C ++ A++E K
Sbjct: 179 QDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAK 238

Query: 239 QLHAQTMKLQYLSK-TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            LHA T+    L +  AV  AL+ +Y KCG +E+A  VF  +  ++++SW+++I  F Q 
Sbjct: 239 ILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQS 298

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  +  ++L+ LM  +G+ PN  TF   L +  SL+    G   HA++++ G +    + 
Sbjct: 299 GQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLT 358

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+V MY   G + E  + + E  +    VSW++ IAG+ +N+    A+  F +M  +  
Sbjct: 359 SALVKMYCNWGWV-ETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T+ S + AC+ + +L    Q+H R+     + +V V ++L+  Y KCG  E+AE 
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEA 477

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  +   ++++W S+  AY QNG   +++ L   M ++G++P    F+A+L +C+++G 
Sbjct: 478 VFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQ 537

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           +  G   +  M +++GI P   H  CMVD+LGRAGKLE A   I+ +  + +   W  L 
Sbjct: 538 MSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLA-WMMLL 596

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            AC+ H+D   A   +++I +L+P +A  YV LS+++  AG    AEE R+ M  + + +
Sbjct: 597 TACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQR 656

Query: 658 EPGCSWIEVYNKIYRFFSQNK--SHSEMPKVYEKLKQLMQQIEDIGHT------------ 703
             G S IE+ ++++ F + +    H  + +++  L++L ++++  G+             
Sbjct: 657 LLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRDVE 716

Query: 704 DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +  KE+ V YHSE LA+G G+IS PA      ++ L 
Sbjct: 717 EGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLR 753



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 243/462 (52%), Gaps = 9/462 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASL-----VNMYAKCGDIKSMVAVVKQ 177
           +L+ CS    L  G+R H L+ + ++  D+    SL     + MY +CG     + V  +
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY-STMLAICGSLSAIDE 236
           M   ++ +   L++ +     F  A   F K+    V P+  T+ S +L   G    +DE
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK++H+  M+  Y     V N ++ MY KCG +E A +VF+ +   NV SWT II  + Q
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDF 355
           +G   + LRL+  M + G+ P+ YTFT  L +C ++       + HA  I   G+     
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGTA++++Y   G + EA     ++  +   VSW++ IA F ++ + + AI+    M   
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLE 314

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T+ ++L+A + L +    ++IH+RIV++ +  +V + S+L++ Y   G  E A
Sbjct: 315 GVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETA 374

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F      DVVSW+SMI  YSQN    +A+ LF +M V+G++P + TF++ + AC+  
Sbjct: 375 RSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGV 434

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           G ++ G ++ E  V+  G+  +    + +V+L G+ G+LE A
Sbjct: 435 GALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLEEA 475



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-----SKTAVSNALLTMY 263
           ++  ++Q      + +L  C  L A+ EGK++H   M+   L      ++ + N ++ MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           ++CG  + A  VF+ +  +NV++WT++I+ F   G +   + L   M   G+ P+  TFT
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 324 -VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
            + L      RN   G   H+ +++ G      V   +V+MY   G++ +A      + +
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSI-Q 179

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
             +  SW   IA + +N    E +   S+M +     D +T++++L AC+ + +L   + 
Sbjct: 180 DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239

Query: 443 IHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           +H+  + S   + +  VG++LI  Y KCG+ E+A  VF Q+   D+VSW+SMI A++Q+G
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSG 299

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +A+ AI L   M +EG+RP N TF+ VL A +     Q G+++   +V+
Sbjct: 300 QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQ 348



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 43/256 (16%)

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE-----AYNKCGSWEDAERVF 479
           ++IL ACS L +L   +++H  +++     +     SL+E      Y +CG  + A  VF
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   +VV+W S+I A++  G    A++LF KM++ G+ P   TF ++L   S      
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA---------------------- 577
           D  K   S + + G   +    + +V++ G+ G +E A                      
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 578 ------------LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE---LDPD 622
                       L  ++   +KP    +  +  AC     L+ A+ +    +    LD  
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR- 252

Query: 623 DAAVYVTLSNMYAEAG 638
           DAAV   L N+Y + G
Sbjct: 253 DAAVGTALINLYGKCG 268


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 195/577 (33%), Positives = 325/577 (56%), Gaps = 23/577 (3%)

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           KS V +  Q+  L       +L    ++AL  + F  F   DG  V   + TY  ++  C
Sbjct: 94  KSSVGICSQIEKL-------VLCKKYRDAL--EMFEIFELEDGFHV--GYSTYDALINAC 142

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             L +I   K+L    +   +     + N +L M++KCGMM DA  +F+ +  RN +SW 
Sbjct: 143 IGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWG 202

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            II+G+   G+Y +  RL  LMRE+  D    TF   + + A L     G   H+  IK 
Sbjct: 203 TIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKA 262

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G+    FV  A++DMYS  G + +A     EM    + V WN+ IAG+  +  +EEA++ 
Sbjct: 263 GLGQDIFVSCALIDMYSKCGSLEDAHCVFDEM-PDKTIVGWNSIIAGYALHGYSEEALDL 321

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           + +M  +    D FT+S I++ CS L S+A  +Q+H+ +V++ F  +V   ++L++ Y+K
Sbjct: 322 YHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSK 381

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G  +DA  VF +++  +++SWN++I  Y  +G   +AI +FEKM+ EG+ P + TFLAV
Sbjct: 382 WGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAV 441

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACS SGL + G ++F+SM +++ + P   H++CM++LLGR G L+ A   I   P +P
Sbjct: 442 LSACSISGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQP 501

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
           TA +W  L  ACR H +L++ +F ++++  ++P+  + Y+ L N+Y  +G   +A +  +
Sbjct: 502 TANMWAALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQ 561

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD---- 704
            +K K +   P CSWIEV N+ + F S +K H ++ KV  K+ +LM  I  +G+      
Sbjct: 562 TLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQN 621

Query: 705 ------NEKEDRV-LYHSERLAVGFGLISLPAKNKFE 734
                 +E E+++ +YHSE+LA+ +GL++   K   +
Sbjct: 622 FMLPDVDENEEKIRMYHSEKLAIAYGLLNTLEKTPLQ 658



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 52/435 (11%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
           DQ++   ++ M+ KCG +     +  +MP  +  S   +++GY  +  + +AF  F+ + 
Sbjct: 166 DQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMR 225

Query: 210 -DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
            +  D  P   T++TM+     L  I  G+QLH+  +K        VS AL+ MY KCG 
Sbjct: 226 EEFYDCGPR--TFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGS 283

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +EDA  VF+ +  + ++ W +II G+  HG  E+ L L   MR+ G+  + +TF++ +  
Sbjct: 284 LEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRI 343

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C+ L +       HA +++ G  L     TA+VD YS  G++ +A+     M    + +S
Sbjct: 344 CSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRM-SCRNIIS 402

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAG+  +   EEAI+ F +M+R     +  T+ ++L ACS+               
Sbjct: 403 WNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSI--------------- 447

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-----WNSMIKAYSQNGRA 503
                      S L E       WE    +F  +T    V      +  MI+   + G  
Sbjct: 448 -----------SGLFER-----GWE----IFQSMTRDHKVKPRAMHFACMIELLGREGLL 487

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYS 562
            +A  L  K      +PT + + A+L AC   G ++ G+   E   K YG+ PE+ ++Y 
Sbjct: 488 DEAYALIRK---APFQPTANMWAALLRACRVHGNLELGKFAAE---KLYGMEPEKLSNYI 541

Query: 563 CMVDLLGRAGKLEIA 577
            ++++   +GKL+ A
Sbjct: 542 VLLNIYNSSGKLKEA 556



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 36/290 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC+LF++ P R  +S   +I                          G++D G      V 
Sbjct: 186 ACRLFDEMPARNAVSWGTII-------------------------SGYVDSGNY----VE 216

Query: 108 CYSLESLLDKQF-------VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
            + L  L+ ++F          ++   +  E +  GR+ H+   K  +  D FV+ +L++
Sbjct: 217 AFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALID 276

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY+KCG ++    V  +MP   I   N ++AGYA +   ++A   + ++    V+ +H+T
Sbjct: 277 MYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFT 336

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +S ++ IC  L+++   KQ+HA  ++  +      + AL+  Y K G ++DA  VF+ + 
Sbjct: 337 FSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMS 396

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            RN+ISW A+I G+  HG  E+ + +   M  +G+ PN  TF   L++C+
Sbjct: 397 CRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACS 446



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  CSR   +   ++ HA + +     D     +LV+ Y+K G +     V  +M   +
Sbjct: 340 IIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRN 399

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N L+AGY  +   ++A   F K+    + PNH T+  +L+ C      + G ++  
Sbjct: 400 IISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQ 459

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDY 300
              +   +   A+  A ++ +  + G++++A ++  +   Q     W A++   + HG+ 
Sbjct: 460 SMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNL 519

Query: 301 E 301
           E
Sbjct: 520 E 520


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 193/590 (32%), Positives = 319/590 (54%), Gaps = 5/590 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D   ++ V+  C+   CL LG + H L  K  +  D F+  +L+NMY+  G ++S  A+
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS-A 233
              +P  D A  N +++ Y       +A + F+K+    ++ +  T + ML++C  L+  
Sbjct: 320 FNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDG 379

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G+ LHA  MK        + NALL+MY+K   +  A+ VFE +   +VISW  +I+ 
Sbjct: 380 SIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISA 439

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F Q     K   L  +M E  I  N YT    LA C    +   G   H   IK G+ + 
Sbjct: 440 FAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEIN 499

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             + T++ +MY   G+   A        +    VSWN+ I+ + +N    +A+  F+ M+
Sbjct: 500 TSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLISSYIKNDNAGKALLLFNHMI 558

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGS 471
            ++   +  T  +IL +C+ L  L   + +H+   + +   E +  + ++ I  Y +CG 
Sbjct: 559 -SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGK 617

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            + AE++F  L    +VSWN+MI  Y  +GR R A + F +M+ +G +P N +F +VLSA
Sbjct: 618 LQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSA 677

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSHSGL   G ++F SMV+++GI P+  HY CMVDLLGR G    A+ FI+++PI+P A 
Sbjct: 678 CSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDAS 737

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IWR L ++C+  S+ K+ E I  +++EL+P +   ++ LSN+YA AGL ++  + RK ++
Sbjct: 738 IWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLR 797

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            + + K PG SWI + N+++ F + +  H +  ++YE L  L   I D+G
Sbjct: 798 ERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 4/431 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C R   +  G R H+ I    +  D  V  +LV+ Y KCG +     V  +MP  D
Sbjct: 66  VLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERD 125

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L++GY     + +A   F+++    + PN  T   +L  CG +  +  G+++H 
Sbjct: 126 LVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHG 185

Query: 243 QTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++       A V  AL+  Y++   +  +  VF  ++ RN++SW AII GF   GD  
Sbjct: 186 YCLRNGLFDMDAYVGTALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCA 244

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K L+L   M  +GI  +  T  V + +CA      +G   H   IK  +    F+  A++
Sbjct: 245 KALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALL 304

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G + E+   L     ++ +  WN+ I+ +       EAI  F +M       D 
Sbjct: 305 NMYSDNGSL-ESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDV 363

Query: 422 FTYSSILKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            T + +L  C+ L   +   + +H+  +KS  E + ++G++L+  Y K      A+ VF 
Sbjct: 364 RTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFE 423

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   DV+SWN+MI A++Q+    KA  LF  M    I+  + T +++L+ C     +  
Sbjct: 424 KMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVF 483

Query: 541 GQKVFESMVKE 551
           G+ +    +K 
Sbjct: 484 GRSIHGFAIKN 494



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
            S + +++ + + P+  T   +L  CG L+AI  G ++H+    L  ++   V  AL+  
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDF 104

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y KCG++ +A  VF  + +R+++SW A+I+G+     Y++ + L   M++ G+ PN  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMG 381
              L +C  +    +G   H   ++ G+   D +VGTA+V  Y     +     ++  + 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV--LSHRVFSLM 222

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
              + VSWNA I GF       +A++ +S M+      D  T   +++AC+    L    
Sbjct: 223 LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGM 282

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H   +K    +++ + ++L+  Y+  GS E +  +F+ +  +D   WNSMI +Y   G
Sbjct: 283 QLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFG 342

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
              +AI LF KM +E I+    T   +LS C+
Sbjct: 343 FHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 84/159 (52%)

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           S  WN+ I    + +     +  ++QM       D  T   +LKAC  L ++    +IHS
Sbjct: 25  SKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHS 84

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I      ++V VG++L++ Y KCG   +A +VF ++   D+VSWN++I  Y      ++
Sbjct: 85  CIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A++LF +M   G+ P + T +A+L AC     ++ GQ++
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEI 183


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 203/614 (33%), Positives = 339/614 (55%), Gaps = 9/614 (1%)

Query: 109  YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
            Y+L++  D+   + +L  C+      LG++ H +  K  +    FV  + ++MY+K G I
Sbjct: 420  YTLQT--DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477

Query: 169  KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                A+   +PY D  S N L  G A+N   ++A     ++    + P+  ++ST +  C
Sbjct: 478  GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537

Query: 229  GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             ++ A + GKQ+H   +K    S  AV ++L+ +Y K G +E +  +F  +   +++   
Sbjct: 538  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597

Query: 289  AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            A+I GF Q+ + ++ ++L   + +DG+ P+  TF+  L+ C+   NS +G   H   +K 
Sbjct: 598  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657

Query: 349  GMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+   D  +G ++  +Y     + +A K L EM    +   W A I+G+ +N   + ++ 
Sbjct: 658  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLV 717

Query: 408  AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            +F +M   +   DE T++S+LKACS + + A  ++IH  I KS F S     S+LI+ Y+
Sbjct: 718  SFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYS 777

Query: 468  KCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG    +   F +L    D++ WNSMI  +++NG A +A++LF+KM    I+P   TFL
Sbjct: 778  KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837

Query: 527  AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
             VL AC+HSGL+ +G+  F SM K YG+ P   HY+C +DLLGR G L+ A   I  LP 
Sbjct: 838  GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897

Query: 587  KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
            +P   +W    AACR H D +  +  +++++EL+P  ++ YV LS+++A  G  A+A+  
Sbjct: 898  RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957

Query: 647  RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
            R+ M+ K ++K PGCSWI V NK   F  Q+K H +  ++YE L  L   ++     DN+
Sbjct: 958  RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK----DND 1013

Query: 707  -KEDRVLYHSERLA 719
              E  +LY +E LA
Sbjct: 1014 IDEYGLLYSAEMLA 1027



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 220/406 (54%), Gaps = 5/406 (1%)

Query: 130 EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           +E L L  R    + K     DQ    ++++  A  G +    A++K+MP     + N +
Sbjct: 241 QEALALFSR----MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAV 296

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G+A++ L       +  +    + P   T+++ML+   ++ A  EG+Q+HA  +    
Sbjct: 297 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 356

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            +   V ++L+ +Y KCG   DA++VF+   ++N++ W A++ GF Q+   E+ +R+   
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 416

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M    +  +E+TF   L +C  L + ++G   H   IK  M +  FV  A +DMYS  G 
Sbjct: 417 MMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGA 476

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           I +AK  L  +     S+SWNA   G  +N + EEA+    +M  +    D+ ++S+ + 
Sbjct: 477 IGDAKA-LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAIN 535

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS + +  T +QIH   +K    SN  VGSSLI+ Y+K G  E + ++F+Q+ A+ +V 
Sbjct: 536 ACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVP 595

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            N++I  + QN    +AI LF++++ +G++P++ TF ++LS CS S
Sbjct: 596 INALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 641



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 251/492 (51%), Gaps = 6/492 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ HA      +  + FV +SL+N+YAKCG       V       +I   N +L G+ +
Sbjct: 344 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++A   F  +    +Q + +T+ ++L  C  LS+   GKQ+H  T+K        V
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +NA L MY K G + DA+++F  +  ++ ISW A+  G  Q+ + E+ + ++  MR  GI
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P++ +F+ A+ +C+++R +  G   H   IK G+     VG++++D+YS  G++  ++K
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              ++  S S V  NA IAGF +N   +EAI+ F Q++++       T+SSIL  CS   
Sbjct: 584 IFAQVDAS-SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSL 642

Query: 436 SLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
           + A  +Q+H   +KS     +  +G SL   Y K    EDA ++ +++    ++  W ++
Sbjct: 643 NSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAI 702

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+QNG    +++ F +M    +R   +TF +VL ACS      DG+++   ++ + G
Sbjct: 703 ISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI-HGLITKSG 761

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEF 611
               E   S ++D+  + G +  +      L  K     W  +    A   ++D  +  F
Sbjct: 762 FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 821

Query: 612 ISKQILELDPDD 623
              + L++ PD+
Sbjct: 822 QKMEELQIKPDE 833



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 227/470 (48%), Gaps = 37/470 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS CSR   L  GR+ H  + K+      F  A+LV+MYAKCGD+ +   V   +   D
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
               + ++A Y +   + +A + F ++D +   P+  T  T+++   S            
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS------------ 271

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                                   G ++ A ++ + +   + ++W A+I+G  Q G    
Sbjct: 272 -----------------------SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   MR  G+ P   TF   L++ A+++    G   HA  +  G+    FVG+++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G   +AK    ++    + V WNA + GF +N+  EEAI  F  M+R     DEF
Sbjct: 369 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ SIL AC+ L S    +Q+H   +K+  + ++ V ++ ++ Y+K G+  DA+ +FS +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D +SWN++    +QN    +A+ + ++M + GI P + +F   ++ACS+    + G+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           ++   +  +YGI    A  S ++DL  + G +E +    + +      PI
Sbjct: 548 QI-HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI 596



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 37/395 (9%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQ 215
           SLV +Y K G +    + +         + + LL+ +A++         F  +      +
Sbjct: 96  SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ +  + +L+ C  +  +  G+Q+H   +K  + S      AL+ MY KCG + +A  V
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+   + I W+++I  + + G Y++ L L   M + G  P++ T    +++ AS    
Sbjct: 216 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS---- 271

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G + HA  +                              LK+M  + S+V+WNA I+G
Sbjct: 272 -SGRLDHATAL------------------------------LKKM-PTPSTVAWNAVISG 299

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             ++      +  +  M          T++S+L A + + +    +Q+H+  V    ++N
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGSSLI  Y KCG   DA+ VF      ++V WN+M+  + QN    +AI +F+ M+ 
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             ++    TF+++L AC++      G++V    +K
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 34/386 (8%)

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           AS    R+S      H ++++ G  L   +G ++V++Y   G +  A   L   G+ AS 
Sbjct: 64  ASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASG 123

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIH 444
            + ++ ++   R+    + + AF + +R  A    D+F  + +L ACS +  LA   Q+H
Sbjct: 124 AA-SSLLSCHARSGSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVH 181

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +VKS F S+V   ++L++ Y KCG   +A RVF  +   D + W+SMI  Y + G  +
Sbjct: 182 CDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQ 241

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ LF +M   G  P   T + ++S  + SG +     + + M       P    ++ +
Sbjct: 242 EALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT-----PSTVAWNAV 296

Query: 565 VDLLGRAGKLEIALIFI----SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE-- 618
           +    ++G LE  ++ +     +  + PT   +  + +A        M  F+  Q +   
Sbjct: 297 ISGHAQSG-LEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA-----NMKAFVEGQQMHAA 350

Query: 619 --LDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
             +   DA V+V  +L N+YA+ G  +DA+    L   K I          ++N +   F
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIV---------MWNAMLTGF 401

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDI 700
            QN+   E  ++++ + +   Q ++ 
Sbjct: 402 VQNELPEEAIRMFQYMMRYTLQTDEF 427


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 203/614 (33%), Positives = 339/614 (55%), Gaps = 9/614 (1%)

Query: 109  YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
            Y+L++  D+   + +L  C+      LG++ H +  K  +    FV  + ++MY+K G I
Sbjct: 430  YTLQT--DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 487

Query: 169  KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                A+   +PY D  S N L  G A+N   ++A     ++    + P+  ++ST +  C
Sbjct: 488  GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 547

Query: 229  GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             ++ A + GKQ+H   +K    S  AV ++L+ +Y K G +E +  +F  +   +++   
Sbjct: 548  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 607

Query: 289  AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            A+I GF Q+ + ++ ++L   + +DG+ P+  TF+  L+ C+   NS +G   H   +K 
Sbjct: 608  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 667

Query: 349  GMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+   D  +G ++  +Y     + +A K L EM    +   W A I+G+ +N   + ++ 
Sbjct: 668  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLV 727

Query: 408  AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            +F +M   +   DE T++S+LKACS + + A  ++IH  I KS F S     S+LI+ Y+
Sbjct: 728  SFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYS 787

Query: 468  KCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG    +   F +L    D++ WNSMI  +++NG A +A++LF+KM    I+P   TFL
Sbjct: 788  KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 847

Query: 527  AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
             VL AC+HSGL+ +G+  F SM K YG+ P   HY+C +DLLGR G L+ A   I  LP 
Sbjct: 848  GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 907

Query: 587  KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
            +P   +W    AACR H D +  +  +++++EL+P  ++ YV LS+++A  G  A+A+  
Sbjct: 908  RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 967

Query: 647  RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
            R+ M+ K ++K PGCSWI V NK   F  Q+K H +  ++YE L  L   ++     DN+
Sbjct: 968  RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK----DND 1023

Query: 707  -KEDRVLYHSERLA 719
              E  +LY +E LA
Sbjct: 1024 IDEYGLLYSAEMLA 1037



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 219/407 (53%), Gaps = 1/407 (0%)

Query: 129 REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           R  C +      + + K     DQ    ++++  A  G +    A++K+MP     + N 
Sbjct: 246 RVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNA 305

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +++G+A++ L       +  +    + P   T+++ML+   ++ A  EG+Q+HA  +   
Sbjct: 306 VISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG 365

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
             +   V ++L+ +Y KCG   DA++VF+   ++N++ W A++ GF Q+   E+ +R+  
Sbjct: 366 LDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQ 425

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M    +  +E+TF   L +C  L + ++G   H   IK  M +  FV  A +DMYS  G
Sbjct: 426 YMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYG 485

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            I +AK  L  +     S+SWNA   G  +N + EEA+    +M  +    D+ ++S+ +
Sbjct: 486 AIGDAKA-LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAI 544

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS + +  T +QIH   +K    SN  VGSSLI+ Y+K G  E + ++F+Q+ A+ +V
Sbjct: 545 NACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIV 604

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             N++I  + QN    +AI LF++++ +G++P++ TF ++LS CS S
Sbjct: 605 PINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 651



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 251/492 (51%), Gaps = 6/492 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ HA      +  + FV +SL+N+YAKCG       V       +I   N +L G+ +
Sbjct: 354 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 413

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++A   F  +    +Q + +T+ ++L  C  LS+   GKQ+H  T+K        V
Sbjct: 414 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 473

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +NA L MY K G + DA+++F  +  ++ ISW A+  G  Q+ + E+ + ++  MR  GI
Sbjct: 474 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 533

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P++ +F+ A+ +C+++R +  G   H   IK G+     VG++++D+YS  G++  ++K
Sbjct: 534 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 593

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              ++  S S V  NA IAGF +N   +EAI+ F Q++++       T+SSIL  CS   
Sbjct: 594 IFAQVDAS-SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSL 652

Query: 436 SLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
           + A  +Q+H   +KS     +  +G SL   Y K    EDA ++ +++    ++  W ++
Sbjct: 653 NSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAI 712

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+QNG    +++ F +M    +R   +TF +VL ACS      DG+++   ++ + G
Sbjct: 713 ISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI-HGLITKSG 771

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEF 611
               E   S ++D+  + G +  +      L  K     W  +    A   ++D  +  F
Sbjct: 772 FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 831

Query: 612 ISKQILELDPDD 623
              + L++ PD+
Sbjct: 832 QKMEELQIKPDE 843



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 227/470 (48%), Gaps = 37/470 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS CSR   L  GR+ H  + K+      F  A+LV+MYAKCGD+ +   V   +   D
Sbjct: 174 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 233

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
               + ++A Y +   + +A + F ++D +   P+  T  T+++   S            
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS------------ 281

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                                   G ++ A ++ + +   + ++W A+I+G  Q G    
Sbjct: 282 -----------------------SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   MR  G+ P   TF   L++ A+++    G   HA  +  G+    FVG+++++
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G   +AK    ++    + V WNA + GF +N+  EEAI  F  M+R     DEF
Sbjct: 379 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ SIL AC+ L S    +Q+H   +K+  + ++ V ++ ++ Y+K G+  DA+ +FS +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D +SWN++    +QN    +A+ + ++M + GI P + +F   ++ACS+    + G+
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           ++   +  +YGI    A  S ++DL  + G +E +    + +      PI
Sbjct: 558 QI-HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI 606



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 37/395 (9%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQ 215
           SLV +Y K G +    + +         + + LL+ +A++         F  +      +
Sbjct: 106 SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 165

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ +  + +L+ C  +  +  G+Q+H   +K  + S      AL+ MY KCG + +A  V
Sbjct: 166 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 225

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+   + I W+++I  + + G Y++ L L   M + G  P++ T    +++ AS    
Sbjct: 226 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS---- 281

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G + HA  +                              LK+M  + S+V+WNA I+G
Sbjct: 282 -SGRLDHATAL------------------------------LKKM-PTPSTVAWNAVISG 309

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             ++      +  +  M          T++S+L A + + +    +Q+H+  V    ++N
Sbjct: 310 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 369

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGSSLI  Y KCG   DA+ VF      ++V WN+M+  + QN    +AI +F+ M+ 
Sbjct: 370 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 429

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             ++    TF+++L AC++      G++V    +K
Sbjct: 430 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 464



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 34/386 (8%)

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           AS    R+S      H ++++ G  L   +G ++V++Y   G +  A   L   G+ AS 
Sbjct: 74  ASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASG 133

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIH 444
            + ++ ++   R+    + + AF + +R  A    D+F  + +L ACS +  LA   Q+H
Sbjct: 134 AA-SSLLSCHARSGSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVH 191

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +VKS F S+V   ++L++ Y KCG   +A RVF  +   D + W+SMI  Y + G  +
Sbjct: 192 CDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQ 251

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ LF +M   G  P   T + ++S  + SG +     + + M       P    ++ +
Sbjct: 252 EALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT-----PSTVAWNAV 306

Query: 565 VDLLGRAGKLEIALIFI----SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE-- 618
           +    ++G LE  ++ +     +  + PT   +  + +A        M  F+  Q +   
Sbjct: 307 ISGHAQSG-LEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA-----NMKAFVEGQQMHAA 360

Query: 619 --LDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
             +   DA V+V  +L N+YA+ G  +DA+    L   K I          ++N +   F
Sbjct: 361 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIV---------MWNAMLTGF 411

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDI 700
            QN+   E  ++++ + +   Q ++ 
Sbjct: 412 VQNELPEEAIRMFQYMMRYTLQTDEF 437


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 217/713 (30%), Positives = 342/713 (47%), Gaps = 61/713 (8%)

Query: 89  DSFPDGFIDDGCSNTVPVT---CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITK 145
           +S    + D+GC+N         +SL    D      V   C     +  G   HAL   
Sbjct: 96  NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
           T    + FV  +LV MY++C  +     V  +M   D+ S N ++  YAK      A   
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215

Query: 206 FLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
           F ++ +    +P++ T   +L  C SL     GKQLH   +  + +    V N L+ MY 
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED----------- 313
           KCGMM++A +VF  +  ++V+SW A++ G+ Q G +E  +RL   M+E+           
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335

Query: 314 ------------------------GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
                                   GI PNE T    L+ CAS+     G   H   IK  
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395

Query: 350 MAL-----GD--FVGTAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQK 401
           + L     GD   V   ++DMY+   ++  A+     +  K    V+W   I G+ ++  
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455

Query: 402 TEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES-NVHV 458
             +A+E  S+M   D     + FT S  L AC+ L +L   +QIH+  ++++  +  + V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            + LI+ Y KCGS  DA  VF  + A + V+W S++  Y  +G   +A+ +F++M   G 
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +    T L VL ACSHSG++  G + F  M   +G+ P   HY+C+VDLLGRAG+L  AL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I  +P++P   +W    + CR H  +++ E+ +++I EL  +    Y  LSN+YA AG
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              D    R LM+ K + K PGCSW+E       FF  +K+H    ++Y+ L   MQ+I+
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           DIG+            D EK+D +  HSE+LA+ +G+++ P       ++ L 
Sbjct: 756 DIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 808



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 212/483 (43%), Gaps = 50/483 (10%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLD--IASCNCLLAGYAKNALFDQAFSFFLKLDG 211
           +T+ L++ Y   G +   V+++++ P  D  +   N L+  Y  N   ++    F  +  
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           +   P++YT+  +   CG +S++  G+  HA ++   ++S   V NAL+ MY +C  + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCA 330
           A  VF+ +   +V+SW +II  + + G  +  L +   M  E G  P+  T    L  CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           SL    +G   H   +   M    FVG  +VDMY+  G + EA      M      VSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWN 299

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS------------------------- 425
           A +AG+ +  + E+A+  F +M       D  T+S                         
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359

Query: 426 ----------SILKACSLLPSLATCEQIHSRIVKSKFE--SNVH-----VGSSLIEAYNK 468
                     S+L  C+ + +L   ++IH   +K   +   N H     V + LI+ Y K
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419

Query: 469 CGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNST 524
           C   + A  +F  L+    DVV+W  MI  YSQ+G A KA+ L  +M  E    RP   T
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
               L AC+    ++ G+++    ++           +C++D+  + G +  A +   N+
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539

Query: 585 PIK 587
             K
Sbjct: 540 MAK 542



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 8/329 (2%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN--VISWTAII 291
           I + K +H + +    L+    S+ L++ YI  G +  A S+       +  V  W ++I
Sbjct: 41  ISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             +  +G   K L L  LM      P+ YTF     +C  + +   G   HA  +  G  
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FVG A+V MYS    + +A+K   EM      VSWN+ I  + +  K + A+E FS+
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSR 218

Query: 412 MVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           M  N+  C  D  T  ++L  C+ L + +  +Q+H   V S+   N+ VG+ L++ Y KC
Sbjct: 219 MT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  ++A  VFS ++  DVVSWN+M+  YSQ GR   A+ LFEKM  E I+    T+ A +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEE 558
           S  +  GL  +   V   M+   GI P E
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSS-GIKPNE 365


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 207/617 (33%), Positives = 329/617 (53%), Gaps = 23/617 (3%)

Query: 51  LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCS--NTVPVTC 108
           LF+  P+R  +S + +I               GYS R      G  ++ C    ++  +C
Sbjct: 98  LFDDMPERDDVSWNSMI--------------AGYSQR------GLNEEACGLFCSMINSC 137

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
            + + L+    +  VL  C    C  +G+  H    K     D FV+ S V MY KCG +
Sbjct: 138 ENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGIL 197

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                   Q+   DI + N ++ GYA+N   ++A   F +++    +PN  T+  +L   
Sbjct: 198 DMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKAS 257

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            ++S    G+  HA+ +KL       V+ AL+ MY K   +ED E  F  + +RN++S+ 
Sbjct: 258 TAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFN 317

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           A+I G+   G YE+ LR+   ++ +G++P+ +TF    +SC+       G   H   +K 
Sbjct: 318 ALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKF 377

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G+     VG +IV+ YS  G    A +  + + +  +SV W   I+GF +N + E+A+  
Sbjct: 378 GLDSDVSVGNSIVNFYSKCGFTDSALEAFESINR-PNSVCWAGIISGFAQNGEGEKALMQ 436

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +M +     DEF+ SS++KA S   ++     +H+ ++KS  +  ++VGS++I+ Y+K
Sbjct: 437 FCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSK 496

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  EDA++VFS +   +VVSWNSMI  Y+QNG  ++A++LF++M   GI PT  TF+ +
Sbjct: 497 CGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGI 556

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L ACSH+GLV++G+  +  MV  YGI P   H +CMVDLLGRAG LE A  F+ +     
Sbjct: 557 LFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSK 616

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L +AC  H +  +    ++  L L+P  ++ Y  LSN+YA   L ++    R 
Sbjct: 617 EPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRD 676

Query: 649 LMKMKEISKEPGCSWIE 665
           LMK   + KEPGCSWIE
Sbjct: 677 LMKDMGVEKEPGCSWIE 693



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 209/410 (50%), Gaps = 7/410 (1%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+  L DQA S FL++    ++PN  TYS  ++ C   +       LH   +K  + ++ 
Sbjct: 17  ARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQL 76

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            VS+ L++MY K   +++A  +F+ + +R+ +SW ++I G+ Q G  E+   L C M   
Sbjct: 77  FVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINS 136

Query: 314 ----GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
                +  +++T    L +C  L  S +G   H   +K G     FV  + V MY   G 
Sbjct: 137 CENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGI 196

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A     ++ ++   V+WN  I G+ +N   EEAIE F QM       ++ T+  +LK
Sbjct: 197 LDMAGLAFDQI-ENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLK 255

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A + +   A     H++++K     +V V ++L++ Y+K    ED ER F +++  ++VS
Sbjct: 256 ASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVS 315

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           +N++I  YS  G+  +A+ ++ ++  EG+ P + TF+ + S+CS S  V +G +V    V
Sbjct: 316 FNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSV 375

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           K +G+  + +  + +V+   + G  + AL    ++  +P +  W  + + 
Sbjct: 376 K-FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCWAGIISG 423



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 210/460 (45%), Gaps = 48/460 (10%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +++ NV+ WT+ I    + G  ++ L     M   GI+PN  T++  +++CA      + 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H  ++K+G +   FV + ++ MYS    I EA+    +M +    VSWN+ IAG+ +
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPER-DDVSWNSMIAGYSQ 119

Query: 399 NQKTEEAIEAFSQMVRN----DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
               EEA   F  M+ +         +FT +++LKAC  L      + +H   VK  F+S
Sbjct: 120 RGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++ V  S +  Y KCG  + A   F Q+   D+V+WN+MI  Y+QN    +AI LF +M 
Sbjct: 180 DLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQME 239

Query: 515 VEGIRPTNSTFLAVLSA-----------CSHSGLVQDG--QKVF---------------E 546
           +EG +P ++TF  VL A           C H+ +++ G    VF               E
Sbjct: 240 LEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299

Query: 547 SMVKEYGILPEE--AHYSCMVDLLGRAGKLEIALIFISNLP---IKPTAPIWRPLFAACR 601
            + + +G + +     ++ ++      GK E AL   S L    ++P +  +  LF++C 
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359

Query: 602 CHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
             S +     +    ++   D D +V  ++ N Y++ G    A E       + I++   
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALE-----AFESINRPNS 414

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
             W  + +     F+QN    +    + K+++ + + ++ 
Sbjct: 415 VCWAGIISG----FAQNGEGEKALMQFCKMRKFIDKTDEF 450


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 194/537 (36%), Positives = 311/537 (57%), Gaps = 13/537 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN +T+S++L+   +   +  G+QLH+   K  + +   V  AL+ MY KC  M  A  V
Sbjct: 8   PNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRV 67

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRN 334
           F+ + +RN++SW ++I GF  +  Y++ + +   ++RE  + PNE + +  L++CA++  
Sbjct: 68  FDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGG 127

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            + G   H  V+K G+    +V  +++DMY       E  K  + +G     V+WN  + 
Sbjct: 128 LNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR-DVVTWNVLVM 186

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           GF +N K EEA   F  M R     DE ++S++L + + L +L     IH +I+K  +  
Sbjct: 187 GFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK 246

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N+ +  SLI  Y KCGS  DA +VF  +   +V+SW +MI AY  +G A + I LFE M+
Sbjct: 247 NMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHML 306

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            EGI P++ TF+ VLSACSH+G V++G   F SM K + + P   HY+CMVDLLGRAG L
Sbjct: 307 SEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWL 366

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + A  FI ++P+KPT  +W  L  ACR + +LKM    ++++ E++P +   YV L+NM 
Sbjct: 367 DEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMC 426

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
             +G   +A E R+LM +  + KEPGCSWI+V N  + F + ++SHS   ++Y+ L++L 
Sbjct: 427 TRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLE 486

Query: 695 QQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + ++  G+            +NE+E  + YHSE+LA+ FGL++LP  +     + L 
Sbjct: 487 KLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLR 543



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 207/416 (49%), Gaps = 13/416 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H+LI K     + FV  +LV+MYAKC D+ S V V  QMP  ++ S N ++ G+  
Sbjct: 29  GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 88

Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           N L+D+A   F   L    V PN  + S++L+ C ++  ++ G+Q+H   +K   +  T 
Sbjct: 89  NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTY 148

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N+L+ MY KC   ++   +F+ +  R+V++W  ++ GF Q+  +E+      +MR +G
Sbjct: 149 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 208

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I P+E +F+  L S ASL   H G   H Q+IK G      +  +++ MY+  G + +A 
Sbjct: 209 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA- 267

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
            Q+ E  +  + +SW A I+ +  +    + IE F  M+         T+  +L ACS  
Sbjct: 268 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACS-- 325

Query: 435 PSLATCEQIHSRIVKSKFESNVHVG----SSLIEAYNKCGSWEDAERVFSQLTAADVVS- 489
                 E+  +     K   +++ G    + +++   + G  ++A+R    +      S 
Sbjct: 326 -HTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSV 384

Query: 490 WNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           W +++ A  + G  +      E++  +E   P N   LA  + C+ SG +++  +V
Sbjct: 385 WGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLA--NMCTRSGRLEEANEV 438



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 172/351 (49%), Gaps = 24/351 (6%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           +SA ++F++ P+R  +S + +I   + N        N Y      F D   +      +P
Sbjct: 62  HSAVRVFDQMPERNLVSWNSMIVGFFHN--------NLYDRAVGVFKDVLRE---KTVIP 110

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
                     ++  V  VLS C+    L  GR+ H ++ K  +    +V  SL++MY KC
Sbjct: 111 ----------NEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKC 160

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
                 V + + +   D+ + N L+ G+ +N  F++A ++F  +    + P+  ++ST+L
Sbjct: 161 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 220

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
               SL+A+ +G  +H Q +KL Y+    +  +L+TMY KCG + DA  VFEG+   NVI
Sbjct: 221 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 280

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWTA+I+ ++ HG   + + L   M  +GI+P+  TF   L++C+       G + H   
Sbjct: 281 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNS 339

Query: 346 IKR--GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +K+   M  G      +VD+    G + EAK+ ++ M    +   W A + 
Sbjct: 340 MKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 390



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 126/242 (52%), Gaps = 2/242 (0%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           MR  G  PN++TF+  L++ A+      G   H+ + K G     FVGTA+VDMY+   +
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSIL 428
           +  A +   +M +  + VSWN+ I GFF N   + A+  F  ++R      +E + SS+L
Sbjct: 61  MHSAVRVFDQMPER-NLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 119

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC+ +  L    Q+H  +VK       +V +SL++ Y KC  +++  ++F  +   DVV
Sbjct: 120 SACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV 179

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +WN ++  + QN +  +A   F  M  EGI P  ++F  VL + +    +  G  + + +
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 239

Query: 549 VK 550
           +K
Sbjct: 240 IK 241



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 75/169 (44%), Gaps = 2/169 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G   H  I K     +  +  SL+ MYAKCG +     V + +   ++ S   +++ 
Sbjct: 229 LHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISA 288

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y  +   +Q    F  +    ++P+H T+  +L+ C     ++EG        K+  ++ 
Sbjct: 289 YQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNP 348

Query: 253 TAVSNA-LLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGD 299
                A ++ +  + G +++A+   E +  +   S W A++   +++G+
Sbjct: 349 GPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGN 397


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 381/733 (51%), Gaps = 40/733 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNI-------EEKGISRNGYSTRNDSFPDGFIDD- 98
           SA +LF   P+R  +S + L+     N+           + R G +     +   F +  
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133

Query: 99  GCSNTVPVT-CYSLESLLDKQF-----------------VIEVLSYCSREECLELGRRYH 140
           G  +T+  + C+S  +L+ K +                 +  +L  C R   L  GR  H
Sbjct: 134 GPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLH 193

Query: 141 A-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           A L+   A     F+   L+ MY+ C D+ S + +   MP  +  S   L++G ++N + 
Sbjct: 194 ARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMH 253

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             A + F  +    V P  +  S+      +L A    +   A +  + + ++  V++ L
Sbjct: 254 ADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTA-SASVGFDTELFVASNL 312

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP-LRLVCLMREDGIDPN 318
             MY KCG++ +A  VF+ + Q++ ++WTA+I+G+ ++G  E   L    + RE  +  +
Sbjct: 313 ADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGAD 372

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           ++ F   L++   L++  +    H  V K G  L   V  A++DMY+   ++  A + LK
Sbjct: 373 QHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLK 432

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
                 + VS  + I G+      EEA+  + ++ R     +EFT+SS++K C++   L 
Sbjct: 433 IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLE 492

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              Q+H++++K+    +  VGS+L++ Y KCG    + ++F+++     ++WN++I  ++
Sbjct: 493 QGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFA 552

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+G  R+AI  F++M+  GIRP +  F+++L+ACSH+GLV +G K F SM + +GI P+E
Sbjct: 553 QHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKE 612

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HYSC++D  GRAG+L+ A  FIS +PIKP A  W  L  ACR     ++ E  ++ +++
Sbjct: 613 EHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMK 672

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+P +  ++V+LS +YA  G   D +  RKLM+   I K PG SW++   K + F S++ 
Sbjct: 673 LEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDW 732

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISL 727
           SH +   +YEKL++L  +I++ G+            D  KE  + YHSER+AV F LIS+
Sbjct: 733 SHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISM 792

Query: 728 PAKNKFECSRTLE 740
           PA       + L 
Sbjct: 793 PATKPIIVKKNLR 805



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 146/618 (23%), Positives = 254/618 (41%), Gaps = 60/618 (9%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C R   L  GR  HA L+   A     F+   L+ MY+ C D+ S + +   MP  
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRR 85

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST------------------ 223
           +  S   L++G ++N +   A + F  +    V P    Y T                  
Sbjct: 86  NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCH 145

Query: 224 ------------------------------MLAICGSLSAIDEGKQLHAQ-TMKLQYLSK 252
                                         +L  CG    +  G+ LHA+  +     + 
Sbjct: 146 SGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAS 205

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           T ++N L+TMY  C  +  A  +F  + +RN +SWT +++G  Q+  +   L     MR 
Sbjct: 206 TFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR 265

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G+ P  +  + A  + A+L          A     G     FV + + DMYS  G + E
Sbjct: 266 AGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCGLLSE 324

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-AACDEFTYSSILKAC 431
           A +   +M +   +V+W A I G+ +N   E A+ +F  M R      D+  + S+L A 
Sbjct: 325 ACRVFDQMPQK-DAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS 383

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS-QLTAADVVSW 490
             L      + IH  + K+ FE  V V ++LI+ Y K    E A RV        +VVS 
Sbjct: 384 GGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSG 443

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            SMI  Y +     +A++++ ++  +G+ P   TF +++  C+   L++ G ++   ++K
Sbjct: 444 TSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIK 503

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA- 609
              ++ +    S +VD+ G+ G + +++   + +  + T   W  +      H   + A 
Sbjct: 504 T-DLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR-TDIAWNAVINVFAQHGHGREAI 561

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK---EISKEPGCSWIEV 666
           +   + I      +   +V+L    + AGL  +  +    MK     E  +E     I+ 
Sbjct: 562 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDT 621

Query: 667 YNKIYRFFSQNKSHSEMP 684
           Y +  R     K  SEMP
Sbjct: 622 YGRAGRLDEAYKFISEMP 639



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 125/558 (22%), Positives = 225/558 (40%), Gaps = 103/558 (18%)

Query: 222 STMLAICGSLSAIDEGKQLHAQ-TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +++L  CG    +  G+ LHA+  +     + T ++N L+TMY  C  +  A  +F  + 
Sbjct: 24  ASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP 83

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF------------------ 322
           +RN +SWT +++G  Q+  +   L     MR  G+ P    +                  
Sbjct: 84  RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASH 143

Query: 323 --------------------------TVALA----SCASLRNSHMGYMFHAQVIKRGMAL 352
                                     TV LA    SC    +   G + HA+++  G A 
Sbjct: 144 CHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAA 203

Query: 353 GD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              F+   ++ MYS   ++  A +    M +  ++VSW   ++G  +N    +A+ AF+ 
Sbjct: 204 ASTFLANHLITMYSHCADLASALRLFAAMPRR-NAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M R   A   F  SS  +A + L +        +      F++ + V S+L + Y+KCG 
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLADMYSKCGL 321

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLS 530
             +A RVF Q+   D V+W +MI  Y++NG    A++ F  M  EG+   +   F +VLS
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLS 381

Query: 531 ACSHSGLVQDG--QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP--- 585
           A   SG ++DG   K     V + G   E A  + ++D+  ++  +E A   +   P   
Sbjct: 382 A---SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 438

Query: 586 --------------------------------IKPTAPIWRPLFAACRCHSDLKMAEFIS 613
                                           ++P    +  +   C   + L+    + 
Sbjct: 439 NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLH 498

Query: 614 KQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
            Q+++ D   D+ V  TL +MY + GL + +     +    EI      +W    N +  
Sbjct: 499 AQVIKTDLIRDSFVGSTLVDMYGKCGLISLS-----MQLFNEIEYRTDIAW----NAVIN 549

Query: 673 FFSQNKSHSEMPKVYEKL 690
            F+Q+    E  + ++++
Sbjct: 550 VFAQHGHGREAIQAFDRM 567



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDA 475
           AA      +S+L++C     L     +H+R+V S    ++  + + LI  Y+ C     A
Sbjct: 16  AAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASA 75

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
            R+F+ +   + VSW +++   SQN     A+  F  M   G+ PT 
Sbjct: 76  LRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTR 122


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 195/548 (35%), Positives = 306/548 (55%), Gaps = 4/548 (0%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           R HAL+  T  CG   + ++ + + A C    +     +  QMP  D+   N L+ GYA 
Sbjct: 47  RIHALVV-TNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYAD 105

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               ++A + +  + G  + P++YT+  ++  C  LSA+ EGK++H   +K  + S   V
Sbjct: 106 AGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFV 165

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            ++L+ MY + G     E VF  +V RN++SWTA+I G+ Q+  +++ L +   M   G 
Sbjct: 166 QSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGT 225

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN  T    L +CA L   ++G + H   IK G+     +  A++ +Y   G +  A+ 
Sbjct: 226 QPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARS 285

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M    + VSWNA IA + +N     A++ F +M       D  T  S++ AC+ L 
Sbjct: 286 LFDGM-VVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLG 344

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L T   +H  + +   E NV + ++LI+ Y KCG+ + A  VF +L    VVSW SMI 
Sbjct: 345 ALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           A + +G    A+ LF +M  EG++P + TF AV +AC HSGLV++G+K FESM+++Y I+
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   H +CMVDLLGRAG L  A  FI  +P++P   +W  L  +CR HS+L++AE ++++
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEK 524

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           +  LDP     YV +SN+YAEAG   DA   RKLM+ +E+ K PG S +EV  + + F S
Sbjct: 525 LFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLS 584

Query: 676 QNKSHSEM 683
            ++S S +
Sbjct: 585 GSRSQSSL 592



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 204/421 (48%), Gaps = 27/421 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    L  G+  H  I K     D FV +SLV MY++ G+   M  V  +M   +
Sbjct: 134 VVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRN 193

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S   ++AGY +N  F +    F ++ G   QPN  T  ++L  C  L  ++ GK +H 
Sbjct: 194 IVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHG 253

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL      +++NAL+ +Y KCG +E A S+F+G+V +N++SW A+I  ++Q+     
Sbjct: 254 YGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGAN 313

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M+ + +D +  T    +++CASL   + G   H  V ++G+ +   +  A++D
Sbjct: 314 AVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALID 373

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G I +  +++ E     S VSW + I     +   E+A++ FS+M       + F
Sbjct: 374 MYAKCGNI-DLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSF 432

Query: 423 TYSSILKACSLLPSLATCEQIHSRIV---KSKFES---------NVHVGSSLIEAYNKCG 470
           T++++  AC            HS +V   +  FES          V   + +++   + G
Sbjct: 433 TFAAVFTACR-----------HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAG 481

Query: 471 SWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           S  +A     ++    DV  W +++ +   +     A ++ EK+ +  + P   TF  ++
Sbjct: 482 SLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFL--LDPQTVTFYVLM 539

Query: 530 S 530
           S
Sbjct: 540 S 540



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 27/328 (8%)

Query: 15  SFTFPYPV--------VEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDL 66
           ++TFP+ V        + + K   CN  K     + F   S   ++++S +  G+   +L
Sbjct: 128 NYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM---EL 184

Query: 67  IFNGYM--NIEEKGISRNGYSTRNDSFPDG---FIDDGCSNTVPVTCYSLESLLDKQFVI 121
           +F   +  NI        GY  +N  F +G   F +   S T P          +   ++
Sbjct: 185 VFGEMVVRNIVSWTAVIAGY-VQNRYFKEGLGVFREMVGSGTQP----------NAVTLV 233

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            VL  C+  E L LG+  H    K  V  D  +T +L+ +Y KCG++++  ++   M   
Sbjct: 234 SVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQ 293

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S N ++A Y +N     A   F ++    V  ++ T  ++++ C SL A++ G+ +H
Sbjct: 294 NLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMH 353

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
               +       +++NAL+ MY KCG ++ A  VFE L  R+V+SWT++I     HG  E
Sbjct: 354 ELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGE 413

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASC 329
             L+L   M+++G+ PN +TF     +C
Sbjct: 414 DALKLFSRMKDEGVKPNSFTFAAVFTAC 441


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 205/620 (33%), Positives = 341/620 (55%), Gaps = 20/620 (3%)

Query: 130  EECLELGRRYHALITKTAVCGDQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
            EE    GR  HA + +T +  ++    + LVNMYAK G I    +V + M   D  S N 
Sbjct: 399  EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 458

Query: 189  LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
            L++G  +N   + A   F ++      P+++T  + L+ C SL  I  G+Q+H   +KL 
Sbjct: 459  LISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG 518

Query: 249  YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ-HGDYEKPLRLV 307
              +  +VSNALL +Y + G   +   VF  + + + +SW ++I           + ++  
Sbjct: 519  LDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYF 578

Query: 308  CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
              M   G   +  TF   L++ +SL    + +  HA V+K  ++    +G A++  Y   
Sbjct: 579  LQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC 638

Query: 368  GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
            GE+ E +K    M ++   VSWN+ I+G+  N+   +A++    M++     D FT+++I
Sbjct: 639  GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATI 698

Query: 428  LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            L AC+ + +L    ++H+  +++  ES+V VGS+L++ Y+KCG  + A R F  +   +V
Sbjct: 699  LSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 758

Query: 488  VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
             SWNSMI  Y+++G   KA+ LF +M+++G  P + TF+ VLSACSH G V++G + F+S
Sbjct: 759  YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKS 818

Query: 548  MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            M + Y + P   H+SCMVDLLGRAGKL+    FI+++P+KP   IWR +  AC C ++ +
Sbjct: 819  MSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGAC-CRANGR 877

Query: 608  MAEF---ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
              E     ++ +LEL+P +A  YV L+NMYA      D  + R  MK   + KE GCSW+
Sbjct: 878  NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWV 937

Query: 665  EVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLY 713
             + + ++ F + +K H E   +Y+KL++L +++ D G+    K           E+ + Y
Sbjct: 938  TMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSY 997

Query: 714  HSERLAVGFGLI---SLPAK 730
            HSE++AV F L    +LP +
Sbjct: 998  HSEKIAVAFVLTRQSALPIR 1017



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 223/459 (48%), Gaps = 25/459 (5%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           C+ T+  +  + ESL+++         C  EE  EL    H    K    G+ F++ +L+
Sbjct: 63  CNTTLFSSSETFESLINR-----YQGSCCSEEAREL----HLQSIKYGFVGNLFLSNTLI 113

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           N+Y + GD+ S   +  +M   ++ +  CL++GY +N   D+A + F  +      PNHY
Sbjct: 114 NIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHY 173

Query: 220 TYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC-GMMEDAESVF 276
            + + L  C     S    G Q+H    K +Y S   V N L++MY  C     DA SVF
Sbjct: 174 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 233

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI----DPNEYTFTVALASCASL 332
           +G+  RN ISW +II+ + + GD      L   M+++G+     PNEYTF   + +  S 
Sbjct: 234 DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSS 293

Query: 333 RNSHMGYM--FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            +  +  +    A+V K G     +V +A+V  ++  G   +AK   ++MG   + VS N
Sbjct: 294 VDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVR-NVVSMN 352

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA----TCEQIHSR 446
             + G  + ++ E A + F +M ++    +  +Y  +L A S    L        ++H+ 
Sbjct: 353 GLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAH 411

Query: 447 IVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           ++++    N V +G+ L+  Y K G+  DA  VF  +   D VSWNS+I    QN  +  
Sbjct: 412 VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSED 471

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A   F +M   G  P+N T ++ LS+C+  G +  G+++
Sbjct: 472 AAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 510



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 204/422 (48%), Gaps = 7/422 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I  LS C+    + LG + H    K  +  D  V+ +L+ +YA+ G     + V   MP
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 180 YLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D  S N ++   + + A   QA  +FL++       +  T+  +L+   SLS  +   
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 610

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQH 297
           Q+HA  +K      TA+ NALL+ Y KCG M + E +F  + + R+ +SW ++I+G+  +
Sbjct: 611 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 670

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
               K + LV  M + G   + +TF   L++CAS+     G   HA  I+  +     VG
Sbjct: 671 ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG 730

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMYS  G I +   +  E+    +  SWN+ I+G+ R+   E+A++ F++M+ +  
Sbjct: 731 SALVDMYSKCGRI-DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 789

Query: 418 ACDEFTYSSILKACSLLPSLATC-EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED-A 475
             D  T+  +L ACS +  +    E   S     +    V   S +++   + G  ++  
Sbjct: 790 PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 849

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQ-NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           + + S     +V+ W +++ A  + NGR  +      +M++E + P N+    +L+    
Sbjct: 850 DFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE-LEPQNAVNYVLLANMYA 908

Query: 535 SG 536
           SG
Sbjct: 909 SG 910



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 6/227 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L +   I +LS  S     E+  + HAL+ K  +  D  +  +L++ Y KCG++     +
Sbjct: 588 LSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKI 647

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             +M    D  S N +++GY  N L  +A      +     + + +T++T+L+ C S++ 
Sbjct: 648 FARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVAT 707

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           ++ G ++HA  ++    S   V +AL+ MY KCG ++ A   FE +  RNV SW ++I+G
Sbjct: 708 LERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 767

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           + +HG  EK L+L   M  DG  P+  TF   L++C     SH+G++
Sbjct: 768 YARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSAC-----SHVGFV 809



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      +LS C+    LE G   HA   +  +  D  V ++LV+MY+KCG I      
Sbjct: 690 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 749

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + MP  ++ S N +++GYA++   ++A   F ++      P+H T+  +L+ C  +  +
Sbjct: 750 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 809

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG + H ++M   Y     V +   ++ +  + G +++       + ++ NV+ W  ++
Sbjct: 810 EEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 204/620 (32%), Positives = 330/620 (53%), Gaps = 19/620 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CSR   L  G+  HAL     + G  FV+ SLV+MYA+CGD+     V       D  S 
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS--AIDEGKQLHAQT 244
           N L++GY +    D     F  +    +  N +   +++  C       +D    +H   
Sbjct: 184 NALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCV 243

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD----- 299
           +K  + S   +++A++ MY K G + +A ++F+ ++  NV+ + A+I G  +        
Sbjct: 244 VKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTD 303

Query: 300 -YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L L   ++  G++P E+TF+  + +C    +   G   H QV+K      DF+G+
Sbjct: 304 VLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGS 363

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+Y   G + +  +    + K    V+W A I+G  +N+  E A+  F +++     
Sbjct: 364 ALIDLYLNSGCMEDGFRCFTSVPKQ-DVVTWTAMISGCVQNELFERALTLFHELLGAGLK 422

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT SS++ AC+ L    T EQI     KS F     +G+S I  Y + G    A R 
Sbjct: 423 PDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRR 482

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++ + D+VSW+++I +++Q+G AR A+  F +MV   + P   TFL VL+ACSH GLV
Sbjct: 483 FQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLV 542

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G K +E+M +EY + P   H +C+VDLLGRAG+L  A  FI +        IWR L A
Sbjct: 543 DEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLA 602

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H D++  + ++ +I+EL P  +A YV L N+Y +AG  + A + R +MK + + KE
Sbjct: 603 SCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKE 662

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD--NEKEDRVL---- 712
           PG SWIE+ + ++ F + +KSH E   +Y KL +++ +I+ +  TD  + K D  +    
Sbjct: 663 PGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQ 722

Query: 713 ----YHSERLAVGFGLISLP 728
               +HSE+LAV  GLI LP
Sbjct: 723 SWMNWHSEKLAVALGLIHLP 742



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 209/414 (50%), Gaps = 12/414 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I +       F+  +L+  Y + G     +  + +MP  +  S N L+  Y++    
Sbjct: 37  HAHIVRAHPSPSLFLRNTLLAAYCRLGGHARRL--LDEMPRTNAVSFNLLIDAYSRAGQP 94

Query: 200 DQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           + +   F +      V+ + +TY+  LA C     + EGK +HA ++         VSN+
Sbjct: 95  EASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNS 154

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L++MY +CG M  A  VF+   +R+ +SW A+++G+ + G  +  LR+  +MR  GI  N
Sbjct: 155 LVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLN 214

Query: 319 EYTFTVALASCASLRNSHM--GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            +     +  CA   +  M      H  V+K G     F+ +A+V MY+  G + EA   
Sbjct: 215 SFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVAL 274

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKT------EEAIEAFSQMVRNDAACDEFTYSSILKA 430
            K +    + V +NA IAG  R++         EA+  +S++        EFT+SS+++A
Sbjct: 275 FKSV-LDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRA 333

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+L   +   +QIH +++K  F+ +  +GS+LI+ Y   G  ED  R F+ +   DVV+W
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTW 393

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            +MI    QN    +A+ LF +++  G++P   T  +V++AC+   + + G+++
Sbjct: 394 TAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQI 447



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 137/278 (49%), Gaps = 11/278 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    +E G++ H  + K    GD F+ ++L+++Y   G ++        +P  D
Sbjct: 330 VIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQD 389

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   +++G  +N LF++A + F +L G  ++P+ +T S+++  C SL+    G+Q+  
Sbjct: 390 VVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQC 449

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  +   TA+ N+ + MY + G +  A   F+ +   +++SW+A+I+   QHG    
Sbjct: 450 FATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARD 509

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY----MFHAQVIKRGMALGDFVG- 357
            LR    M +  + PNE TF   L +C     SH G     + + + +K   AL   +  
Sbjct: 510 ALRFFNEMVDAKVVPNEITFLGVLTAC-----SHGGLVDEGLKYYETMKEEYALSPTIKH 564

Query: 358 -TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            T +VD+    G + +A+  +++       V W + +A
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLA 602



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 4/183 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+       G +     TK+       +  S ++MYA+ GD+ + V   ++M   D
Sbjct: 431 VMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHD 490

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S + +++ +A++     A  FF ++    V PN  T+  +L  C     +DEG + + 
Sbjct: 491 IVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYY- 549

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIINGFKQHGD 299
           +TMK +Y     + +   ++ +  + G + DAE+ + + +     + W +++   + H D
Sbjct: 550 ETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRD 609

Query: 300 YEK 302
            E+
Sbjct: 610 MER 612



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 7/152 (4%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y   L++CS  P  A    +H+ IV++    ++ + ++L+ AY + G    A R+  ++ 
Sbjct: 20  YLHHLRSCSA-PRHAA--AVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMP 74

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQ 542
             + VS+N +I AYS+ G+   ++  F +     G+R    T+ A L+ACS +G +++G+
Sbjct: 75  RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            V    V E GI       + +V +  R G +
Sbjct: 135 AVHALSVLE-GIAGGVFVSNSLVSMYARCGDM 165


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 209/642 (32%), Positives = 341/642 (53%), Gaps = 26/642 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQM 178
           + VL  C+    L LGR  HA + K   CG +      +L+ MYAK G + S + V  Q+
Sbjct: 271 VAVLQVCAELGLLSLGRELHAALLK---CGSELNIQCNALLVMYAKYGRVDSALRVFGQI 327

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D  S N +L+ Y +N+ + +A  FF ++     QP+H    ++ +  G LS ++ G+
Sbjct: 328 AEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGR 387

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           + HA  +K +  +   V N L+ MYIKCG +E +  VFE +  R+ ISWT I+  F Q  
Sbjct: 388 EFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSS 447

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            + + L ++  ++++GI  +       L +C  L++  +    H   I+ G+ L   +  
Sbjct: 448 RHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGL-LDLILEN 506

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++D+Y   GE   +    + + K    VSW + I     N +   A+  F++M + +  
Sbjct: 507 RLIDIYGECGEFDHSLNLFQRVEKK-DIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQ 565

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D     SIL A + L SL   +Q+H  +++  F     V SSL++ Y+ CGS   A RV
Sbjct: 566 PDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRV 625

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +    DVV W +MI A   +G  ++AI LF++M+  G+ P + +FLA+L ACSHS LV
Sbjct: 626 FERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLV 685

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+   + MV +Y + P + HY+C+VD+LGR+G+ E A  FI  +P+ P + +W  L  
Sbjct: 686 EEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLG 745

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H +  +A   + ++LEL+PD+   Y+ +SN++AE G   +A+E R  M  + + K 
Sbjct: 746 ACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKN 805

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH------------TDNE 706
           P CSWIE+ N I+ F S +  H +   ++ KL ++ + +   G             ++ E
Sbjct: 806 PACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEE 865

Query: 707 KEDRVLYHSERLAVGFGLIS----LP---AKNKFECSRTLEY 741
           K D +  HSER+A+ FGLIS    +P   AKN   C    E+
Sbjct: 866 KIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEF 907



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 242/516 (46%), Gaps = 18/516 (3%)

Query: 136 GRRYHALITKTAVCG---DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           GR+ HA    T       D F+   LV MY +CG +     +   MP   + S N L+  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 193 YAKNALFDQAFSFFLKLDGIDV---QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           Y  +    +A   +  +         P+  T +++L  CG+      G ++H   +K+  
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAIINGFKQHGDYEKPLRLV 307
              T V+NAL+ MY KCG+++ A  VFE L Q  R+V SW ++++G  Q+G   + L L 
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             M+  G   N YT    L  CA L    +G   HA ++K G  L +    A++ MY+  
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSEL-NIQCNALLVMYAKY 314

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G +  A +   ++ +    +SWN+ ++ + +N    EAI+ F +M+++    D     S+
Sbjct: 315 GRVDSALRVFGQIAEK-DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSL 373

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
             A   L  L    + H+  +K +  +++ VG++L++ Y KCGS E + +VF  +   D 
Sbjct: 374 SSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDH 433

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           +SW +++  ++Q+ R  +A+ +  ++  EGI   +    ++L  C     +   ++V   
Sbjct: 434 ISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCY 493

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            ++  G+L +    + ++D+ G  G+ + +L     +  K     W  +   C  +  L 
Sbjct: 494 AIRN-GLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVS-WTSMINCCTNNGRLN 550

Query: 608 MAEFI--SKQILELDPDDAAVYVTLSNMYAEAGLQA 641
            A F+    Q   + PD  A+   +S + A AGL +
Sbjct: 551 GAVFLFTEMQKANIQPDSVAL---VSILVAIAGLSS 583



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 170/343 (49%), Gaps = 8/343 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA---VSNALLTMYIKCGMMEDA 272
           P    Y  +L +  +  A  EG+Q+HA  +    L++     ++  L+ MY +CG ++DA
Sbjct: 55  PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDA 114

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED---GIDPNEYTFTVALASC 329
             +F G+  R V SW A++  +   G   + +R+   MR     G  P+  T    L +C
Sbjct: 115 RRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC 174

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-S 388
            +  +   G   H   +K G+     V  A++ MY+  G +  A +  + + + A  V S
Sbjct: 175 GAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVAS 234

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN+ ++G  +N +T EA+  F  M       + +T  ++L+ C+ L  L+   ++H+ ++
Sbjct: 235 WNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALL 294

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K   E N+   ++L+  Y K G  + A RVF Q+   D +SWNSM+  Y QN    +AI 
Sbjct: 295 KCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAID 353

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            F +M+  G +P ++  +++ SA  H   + +G++     +K+
Sbjct: 354 FFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQ 396



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 186/417 (44%), Gaps = 35/417 (8%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V+ + S       L  GR +HA   K  +  D  V  +L++MY KCG I+    V 
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + M   D  S   +LA +A+++   +A    L+L    +  +     ++L  C  L +I 
Sbjct: 426 ESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS 485

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             KQ+H   ++   L    + N L+ +Y +CG  + + ++F+ + +++++SWT++IN   
Sbjct: 486 LLKQVHCYAIR-NGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCT 544

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G     + L   M++  I P+       L + A L +   G   H  +I+R   +   
Sbjct: 545 NNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP 604

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V +++VDMYSG G +  A +   E  K    V W A I     +   ++AI+ F +M++ 
Sbjct: 605 VVSSLVDMYSGCGSMNYAIRVF-ERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQT 663

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  ++ ++L ACS           HS++V    E   H    ++  Y +   W++ 
Sbjct: 664 GLTPDHVSFLALLYACS-----------HSKLV----EEGKHYLDIMVSKY-RLKPWQE- 706

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
                         +  ++    ++G+  +A    + M ++   P ++ + A+L AC
Sbjct: 707 -------------HYACVVDILGRSGQTEEAYEFIKTMPMD---PKSAVWCALLGAC 747


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 321/578 (55%), Gaps = 10/578 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G + H+L  +    GD ++ + L+ MY++CG + +   V  +M   D+
Sbjct: 48  LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 107

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
                L++ + +N  F+ A    +++    ++PN +T +T+L  C  +     G+Q+H  
Sbjct: 108 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGY 163

Query: 244 TMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +K   L   +V  S AL+  Y + G  + A++VF+ L  +NV+SW +++  + + G  E
Sbjct: 164 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 223

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L++   M  +G+DPNE+  ++ L +C S+    +G   H   IK  +     V  A++
Sbjct: 224 EALQVFGDMISEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALL 280

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY   G + E +  L ++ ++   VSW   I+  F+N   E+AI    QM       + 
Sbjct: 281 SMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 339

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           + +SS+L +C+ + SL    Q H   +K   +S +  G++LI  Y+KCG    A   F  
Sbjct: 340 YAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDV 399

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DV SWNS+I  ++Q+G A KA+ +F KM   GI+P +STFL VL  C+HSG+V++G
Sbjct: 400 MHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG 459

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F  M+ +Y   P  +HY+CM+D+LGR G+ + AL  I+++P +P A IW+ L A+C+
Sbjct: 460 ELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCK 519

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L + +  + +++EL   D+A YV +SN+YA  G   DA + R+ M    + K+ GC
Sbjct: 520 LHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGC 579

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIE+ N+++ F S++ SH     +Y+ L +L+  ++D
Sbjct: 580 SWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 617



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 264/564 (46%), Gaps = 30/564 (5%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  ++ +   +++GY +N   + A + F  +    V PN +  +  L  C  L A+  G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+H+  ++  +     + + L+ MY +CG +  A+ VF+ +   +V+ +T++I+ F ++
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GM-ALGDF 355
           G++E     +  M + G+ PNE+T T  L +C  +    +G   H  +IK+ G+ +   +
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
             TA++D YS  GE   AK     +    + VSW + +  + R+ + EEA++ F  M+  
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSL-HCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISE 235

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +EF  S +L AC    S+    Q+H   +K    +++ V ++L+  Y + G  E+ 
Sbjct: 236 GVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEEL 292

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           E + +++   D+VSW + I A  QNG   KAI L  +M  EG  P    F +VLS+C+  
Sbjct: 293 EAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADV 352

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G + F  +  + G   E    + ++++  + G++  A +    +        W  
Sbjct: 353 ASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTS-WNS 410

Query: 596 LFAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           L      H D   A E  SK     + PDD+     L      +G+  + E   +LM + 
Sbjct: 411 LIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC-NHSGMVEEGELFFRLM-ID 468

Query: 654 EISKEPGCS----WIEVYNKIYRFFSQNKSHSEMPKVYEKL--KQLMQQIE-----DIGH 702
           + S  P  S     I++  +  RF    +  ++MP   + L  K L+   +     DIG 
Sbjct: 469 QYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGK 528

Query: 703 TDNEKEDRVLYHSERLAVGFGLIS 726
                 DR++  S+R +  + L+S
Sbjct: 529 L---AADRLMELSDRDSASYVLMS 549



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 51/303 (16%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYL 181
           VLS C+    L+ G ++H L  K   C  +  T  +L+NMY+KCG + S       M   
Sbjct: 345 VLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 403

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N L+ G+A++   ++A   F K+    ++P+  T+  +L  C     ++EG +L 
Sbjct: 404 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-ELF 462

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            + M  QY    A S+                             +  +I+   ++G ++
Sbjct: 463 FRLMIDQYSFTPAPSH-----------------------------YACMIDMLGRNGRFD 493

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + LR++  M     +P+   +   LASC   RN  +G +       R M L D    + V
Sbjct: 494 EALRMINDMP---FEPDALIWKTLLASCKLHRNLDIGKL----AADRLMELSDRDSASYV 546

Query: 362 ---DMYSGLGEIWE----AKKQLKEMG-KSASSVSW---NAQIAGFFRNQKTEEAIEAFS 410
              ++Y+  GE WE     ++++ E G K  +  SW   N ++  F     +    ++  
Sbjct: 547 LMSNIYAMHGE-WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIY 605

Query: 411 QMV 413
           QM+
Sbjct: 606 QML 608


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 321/578 (55%), Gaps = 10/578 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G + H+L  +    GD ++ + L+ MY++CG + +   V  +M   D+
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
                L++ + +N  F+ A    +++    ++PN +T +T+L  C  +     G+Q+H  
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGY 236

Query: 244 TMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +K   L   +V  S AL+  Y + G  + A++VF+ L  +NV+SW +++  + + G  E
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L++   M  +G+DPNE+  ++ L +C S+    +G   H   IK  +     V  A++
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALL 353

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY   G + E +  L ++ ++   VSW   I+  F+N   E+AI    QM       + 
Sbjct: 354 SMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 412

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           + +SS+L +C+ + SL    Q H   +K   +S +  G++LI  Y+KCG    A   F  
Sbjct: 413 YAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDV 472

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DV SWNS+I  ++Q+G A KA+ +F KM   GI+P +STFL VL  C+HSG+V++G
Sbjct: 473 MHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG 532

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F  M+ +Y   P  +HY+CM+D+LGR G+ + AL  I+++P +P A IW+ L A+C+
Sbjct: 533 ELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCK 592

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L + +  + +++EL   D+A YV +SN+YA  G   DA + R+ M    + K+ GC
Sbjct: 593 LHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGC 652

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIE+ N+++ F S++ SH     +Y+ L +L+  ++D
Sbjct: 653 SWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 272/583 (46%), Gaps = 30/583 (5%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
           +N   K G +   + +  +MP  ++ +   +++GY +N   + A + F  +    V PN 
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           +  +  L  C  L A+  G+Q+H+  ++  +     + + L+ MY +CG +  A+ VF+ 
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +   +V+ +T++I+ F ++G++E     +  M + G+ PNE+T T  L +C  +    +G
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LG 230

Query: 339 YMFHAQVIKR-GM-ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
              H  +IK+ G+ +   +  TA++D YS  GE   AK     +    + VSW + +  +
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL-HCKNVVSWCSMMQLY 289

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R+ + EEA++ F  M+      +EF  S +L AC    S+    Q+H   +K    +++
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDI 346

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L+  Y + G  E+ E + +++   D+VSW + I A  QNG   KAI L  +M  E
Sbjct: 347 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 406

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G  P    F +VLS+C+    +  G + F  +  + G   E    + ++++  + G++  
Sbjct: 407 GFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGS 465

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAVYVTLSNMY 634
           A +    +        W  L      H D   A E  SK     + PDD+     L    
Sbjct: 466 ARLAFDVMHTHDVTS-WNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCN 524

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCS----WIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
             +G+  + E   +LM + + S  P  S     I++  +  RF    +  ++MP   + L
Sbjct: 525 -HSGMVEEGELFFRLM-IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL 582

Query: 691 --KQLMQQIE-----DIGHTDNEKEDRVLYHSERLAVGFGLIS 726
             K L+   +     DIG       DR++  S+R +  + L+S
Sbjct: 583 IWKTLLASCKLHRNLDIGKL---AADRLMELSDRDSASYVLMS 622



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 51/303 (16%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYL 181
           VLS C+    L+ G ++H L  K   C  +  T  +L+NMY+KCG + S       M   
Sbjct: 418 VLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N L+ G+A++   ++A   F K+    ++P+  T+  +L  C     ++EG +L 
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-ELF 535

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            + M  QY    A S+                             +  +I+   ++G ++
Sbjct: 536 FRLMIDQYSFTPAPSH-----------------------------YACMIDMLGRNGRFD 566

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + LR++  M     +P+   +   LASC   RN  +G +       R M L D    + V
Sbjct: 567 EALRMINDMP---FEPDALIWKTLLASCKLHRNLDIGKL----AADRLMELSDRDSASYV 619

Query: 362 ---DMYSGLGEIWE----AKKQLKEMG-KSASSVSW---NAQIAGFFRNQKTEEAIEAFS 410
              ++Y+  GE WE     ++++ E G K  +  SW   N ++  F     +    ++  
Sbjct: 620 LMSNIYAMHGE-WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIY 678

Query: 411 QMV 413
           QM+
Sbjct: 679 QML 681


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 203/615 (33%), Positives = 333/615 (54%), Gaps = 27/615 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA + KT    + FV + LVN+YAKCG + +   V   +P  ++     L+ GY +N+  
Sbjct: 3   HAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQP 62

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A   F  +      P+++T S  L  C SL +I  GKQ HA  +K +    +++ NAL
Sbjct: 63  EVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNAL 122

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
            ++Y K G ++ +   F    +++VISWT II+    +G     LRL   M  + ++PN+
Sbjct: 123 CSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPND 182

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +T T  L+ C+++++S +G   H+   K G      +  ++V +Y   G I EAK     
Sbjct: 183 FTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNR 242

Query: 380 MGKSASSVSWNAQIAG-----------FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           M +  + ++WNA IAG           F   Q   EA+  + ++ R+    D FT SSIL
Sbjct: 243 M-EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             CS L +L   EQIH++ +KS F S+V VG++L++ Y+KCGS E A + F  ++   ++
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SW SMI +++++G+++ A+ LFE M + G RP   TF+ VL+ACSH+G+V +  + FE M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            KEY I P   HY C+VD+  R G+L+ A   I  + ++P   IW  L A CR H + ++
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
             + ++Q+L+L P     YV L NMY  A    D    R+LMK +++ K    S I +  
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRV---------------LY 713
           +++ F + N+ H+   +++  L  L+ + + +G+   E  + +               +Y
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601

Query: 714 HSERLAVGFGLISLP 728
           HSE+LAV FGL++ P
Sbjct: 602 HSEKLAVTFGLLNTP 616



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 228/459 (49%), Gaps = 38/459 (8%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  +K     +  V + L+ +Y KCG+M +A  VF+ L +RNV+ WT ++ G+ Q+  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E  + +   M E G  P+ +T ++AL +C+SL +  +G  FHA +IK  ++    +G A
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +  +YS  G +  + K  +E G+    +SW   I+    N +    +  F +M+  +   
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEK-DVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           ++FT +S+L  CS + S     Q+HS   K   ESN+ + +SL+  Y KCG  ++A+ +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240

Query: 480 SQLTAADVVSWNSMIKAYSQ-------NGRARK----AIILFEKMVVEGIRPTNSTFLAV 528
           +++   ++++WN+MI  ++Q       N  A++    A+ ++ K+   G +P   T  ++
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L+ CS    ++ G+++    +K  G L +    + +VD+  + G +E A     ++  + 
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKS-GFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR- 358

Query: 589 TAPIWRPLFAACRCHS----------DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
           T   W  +  +   H           D+++A F   QI          +V +    + AG
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQI---------TFVGVLAACSHAG 409

Query: 639 LQADAEEQRKLM----KMKEISKEPGCSWIEVYNKIYRF 673
           +  +A E  ++M    K+K +    GC  ++++ ++ R 
Sbjct: 410 MVDEALEYFEIMQKEYKIKPVMDHYGC-LVDMFVRLGRL 447



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 167/320 (52%), Gaps = 12/320 (3%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ CS  E + LG+++HA I K  +  D  +  +L ++Y+K G + S V   ++    D+
Sbjct: 88  LNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDV 147

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   +++    N         F+++   +V+PN +T +++L++C ++ + D G Q+H+ 
Sbjct: 148 ISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSL 207

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK- 302
           + KL + S   ++N+L+ +Y+KCG +++A+++F  +  +N+I+W A+I G  Q  D  K 
Sbjct: 208 STKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKD 267

Query: 303 ----------PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
                      L +   +   G  P+ +T +  L  C+ L     G   HAQ IK G   
Sbjct: 268 NFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLS 327

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              VGTA+VDMY   G I  A+K   +M  + + +SW + I  F R+ +++ A++ F  M
Sbjct: 328 DVVVGTALVDMYDKCGSIERARKAFLDM-STRTLISWTSMITSFARHGQSQHALQLFEDM 386

Query: 413 VRNDAACDEFTYSSILKACS 432
                  ++ T+  +L ACS
Sbjct: 387 RLAGFRPNQITFVGVLAACS 406



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 15/295 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS CS  +  +LG + H+L TK     +  +T SLV +Y KCG I     +  +M Y +
Sbjct: 188 VLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKN 247

Query: 183 IASCNCLLAGYAK-----------NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + + N ++AG+A+                +A   +LKL+    +P+ +T S++L +C  L
Sbjct: 248 LITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRL 307

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           +A+++G+Q+HAQT+K  +LS   V  AL+ MY KCG +E A   F  +  R +ISWT++I
Sbjct: 308 AALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMI 367

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRG 349
             F +HG  +  L+L   MR  G  PN+ TF   LA+C  A + +  + Y    Q   + 
Sbjct: 368 TSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKI 427

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
             + D  G  +VDM+  LG + EA   +K M    +   W   IAG  RN   EE
Sbjct: 428 KPVMDHYG-CLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG-CRNHGNEE 480



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 1/194 (0%)

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
           M HA VIK G     FV + +V++Y+  G +  A+K    + +  + V W   + G+ +N
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRR-NVVVWTTLMTGYVQN 59

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            + E A+E F  M+ + +    FT S  L ACS L S+   +Q H+ I+K +   +  +G
Sbjct: 60  SQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIG 119

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L   Y+K GS + + + F +    DV+SW ++I A   NGRA   + LF +M+ E + 
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179

Query: 520 PTNSTFLAVLSACS 533
           P + T  +VLS CS
Sbjct: 180 PNDFTLTSVLSLCS 193


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 326/590 (55%), Gaps = 11/590 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++ L +    + L+L R+ H+ I    +  +  +   L+  YA C        V   + 
Sbjct: 26  LLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQ 85

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           + ++   N L+ GYAKN L+++AF  F ++   DV P+ +T ST+  +   L A+  GK 
Sbjct: 86  HKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H +++++ ++S T V+N++++MY KCG  E++  VF+ +  RN  SW  +I G+   G+
Sbjct: 146 IHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205

Query: 300 ---YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALG-- 353
               E+    V  M+ D + P+ YT +  L  C   +     G   H  ++K  + LG  
Sbjct: 206 CNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLD 265

Query: 354 --DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               +G  ++DMYS   ++   ++    M K  +  SW A I G+  N  ++EA+  F  
Sbjct: 266 SDVHLGCCLIDMYSRSNKVVVGRRVFDRM-KCRNVFSWTAMINGYVENGDSDEALSLFRD 324

Query: 412 M-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           M V +    +  +  S+L ACS    L +  QIH   V+ +  + V + ++LI+ Y+KCG
Sbjct: 325 MQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384

Query: 471 SWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           S + A RVF   +   D +SW+SMI  Y  +G+ ++AI+L++KM+  GIRP   T + +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACS SGLV +G  ++ S++ +YGI P    ++C+VD+LGRAG+L+ AL FI  +P++P 
Sbjct: 445 SACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPG 504

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L +    H DL+M E   + +++L+P++ + YV++SN+YA +       E R++
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRM 564

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           MK K + K PGCSWI + NK + F+  +K+H     +Y  L  L+  + D
Sbjct: 565 MKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLTMND 614


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 202/620 (32%), Positives = 334/620 (53%), Gaps = 19/620 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CSR   L  G+  HA+     +    F++ SL +MYA CG++     V       D  S 
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSW 172

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE--GKQLHAQT 244
           N LL+GY +    ++    F  +    +  N +   +++  C S S +     + +H   
Sbjct: 173 NSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCV 232

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY---- 300
           +K    +   +++A++ MY K G + +A ++F+ +   NVI + A+I GF +        
Sbjct: 233 VKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKE 292

Query: 301 --EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L L   M+  G+ P+E+TF+  L +C        G   H QV+K      D++G+
Sbjct: 293 VSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGS 352

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+YS  G + +  +  + + K    V+W + I+G  +N+  E+A+  F + +     
Sbjct: 353 ALIDLYSDSGCMEDGYRCFRSLPKQ-DIVTWTSMISGCVQNELFEKALRLFQESICYGLK 411

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT SS++ AC+ L    T EQI    +K  F     +G+S I    + G  +   R 
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRR 471

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++ + DVVSW+++I +++Q+G AR A+ +F +M+   + P   TFL VL+ACSH GLV
Sbjct: 472 FQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLV 531

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            DG + +E M  EYG+ P   H +C+VDLLGRAG+L  A  FI +      A +WR L A
Sbjct: 532 DDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H D++  + ++ QI++L+P  +A YV L NMY +AG  + A + R LMK + + KE
Sbjct: 592 SCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKE 651

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN----------EKE 708
           PG SWIE+ + ++ F + +KSH E   +Y+KL +++ +IE + +TDN           ++
Sbjct: 652 PGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSEQ 711

Query: 709 DRVLYHSERLAVGFGLISLP 728
           + V  HSE++AV FG+I LP
Sbjct: 712 NLVGCHSEKIAVAFGMIHLP 731



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 187/382 (48%), Gaps = 14/382 (3%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME--DAESVFEGLVQRNVISW 287
           S +A+     +HA   +    +   + N+LL  Y + G+     A  + + + +RN +S+
Sbjct: 11  SCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSY 70

Query: 288 TAIINGFKQHGDYEKPLR-LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
             +I+ + + G   + L          G+  + +T+  ALA+C+   +   G   HA  +
Sbjct: 71  NLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTV 130

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
             G+  G F+  ++  MY+  GE+ EA++   +  +    VSWN+ ++G+ R    EE +
Sbjct: 131 LDGLGNGVFLSNSLASMYASCGEMGEARRVF-DAAEEHDDVSWNSLLSGYVRAGAREETL 189

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLA--TCEQIHSRIVKSKFESNVHVGSSLIE 464
           + FS M  +    + F   SI+K C+    +     E +H  +VK+  ++++ + S++I+
Sbjct: 190 KVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMID 249

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA------RKAIILFEKMVVEGI 518
            Y K G+  +A  +F  +   +V+ +N+MI  + ++  A      R+A+ L+ +M   G+
Sbjct: 250 MYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGM 309

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P+  TF ++L AC+ +G    G+++   ++K +    ++   S ++DL   +G +E   
Sbjct: 310 QPSEFTFSSILRACNLAGEFGFGKQIHGQVLK-HSFHDDDYIGSALIDLYSDSGCMEDGY 368

Query: 579 IFISNLPIKPTAPIWRPLFAAC 600
               +LP K     W  + + C
Sbjct: 369 RCFRSLP-KQDIVTWTSMISGC 389


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 201/634 (31%), Positives = 332/634 (52%), Gaps = 17/634 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+ C+  E L+ G   H  I +    GD FV  +L+NMY KCG ++      K++ +
Sbjct: 109 VAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH 168

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            D+ S   ++A   ++  F  A   +  ++LDG  V PN  T  T+    G  + + EGK
Sbjct: 169 RDVVSWTAMIAACVQHDQFALARWLYRRMQLDG--VVPNKITLYTVFNAYGDPNYLSEGK 226

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            ++         S   V N+ + M+   G++ DA  +FE +V R+V++W  +I  + Q+ 
Sbjct: 227 FVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNE 286

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           ++ + +RL   +++DG+  N+ TF + L    SL +   G + H  V + G      V T
Sbjct: 287 NFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVAT 346

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ +Y       +A K   +MG S   ++W      + +N   +EA++ F +M      
Sbjct: 347 ALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 405

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               T  ++L  C+ L +L    QIHS I++++F   + V ++LI  Y KCG   +A  V
Sbjct: 406 PTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSV 465

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D++ WNSM+ AY+Q+G   + + LF +M ++G++    +F++VLSA SHSG V
Sbjct: 466 FEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSV 525

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLF 597
            DG + F +M++++ I P    Y C+VDLLGRAG+++ A+  +  L    P   +W  L 
Sbjct: 526 TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 585

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H+    A+  ++Q+LE DP  +  YV LSN+YA AG        RKLM+ + + K
Sbjct: 586 GACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKK 645

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
           EPG S IE+ N+++ F   ++SH     +Y +L  L  ++   G+            D  
Sbjct: 646 EPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDER 705

Query: 707 KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           KED + YHSERLA+ FGLIS P        + L 
Sbjct: 706 KEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLR 739



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 255/530 (48%), Gaps = 6/530 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D  F + +L  CS  + ++ GRR H  +       +  V   L+ MYA+CG +     V 
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D+ +   ++  Y +   +D+A   F ++   DV P   TY  +L  C S  ++ 
Sbjct: 63  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G ++H Q ++  +     V  AL+ MY KCG +  A   F+ L  R+V+SWTA+I    
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH  +     L   M+ DG+ PN+ T      +         G   +  V    M     
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  + V+M+   G + +A++  ++M      V+WN  I  + +N+   EA+  F ++ ++
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++ T+  +L   + L SLA  + IH  + ++ ++ +  V ++L+  Y +C +   A
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F  + + DV++W  M  AY+QNG  ++A+ LF++M +EG RPT++T +AVL  C+H 
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +Q G+++  S + E     E    + ++++ G+ GK+  A+     +  K    +W  
Sbjct: 422 AALQKGRQI-HSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILVWNS 479

Query: 596 LFAACRCHS--DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +  A   H   D  +  F   Q L+    DA  +V++ +  + +G   D 
Sbjct: 480 MLGAYAQHGYYDETLQLFNQMQ-LDGVKADAVSFVSVLSALSHSGSVTDG 528



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 181/359 (50%), Gaps = 8/359 (2%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+   +  +L  C S   +D G+++H       +     V   L+ MY +CG + +A+ 
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VFE L +++V +WT +I  + Q GDY++ L +   M+E+ + P + T+   L +CAS  +
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI---WEAKKQLKEMGKSASSVSWNA 391
              G   H Q++++G     FVGTA+++MY+  G +   W++ K+L+        VSW A
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH----RDVVSWTA 176

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IA   ++ +   A   + +M  +    ++ T  ++  A      L+  + ++  +    
Sbjct: 177 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGV 236

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            ES+V V +S +  +   G   DA R+F  +   DVV+WN +I  Y QN    +A+ LF 
Sbjct: 237 MESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFG 296

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++  +G++  + TF+ +L+  +    +  G KV   +VKE G   +    + ++ L GR
Sbjct: 297 RLQQDGVKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDAVVATALMSLYGR 354



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 65/122 (53%), Gaps = 4/122 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    L+ GR+ H+ I +     +  V  +L+NMY KCG +   ++V ++M 
Sbjct: 411 LVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA 470

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             DI   N +L  YA++  +D+    F  ++LDG  V+ +  ++ ++L+      ++ +G
Sbjct: 471 KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG--VKADAVSFVSVLSALSHSGSVTDG 528

Query: 238 KQ 239
            Q
Sbjct: 529 YQ 530


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 216/644 (33%), Positives = 357/644 (55%), Gaps = 39/644 (6%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP + Y     L   F++ + S C R   L   RR   +   T  C + F   +L++ YA
Sbjct: 39  VPTSTY-----LSNHFLL-LYSKCRR---LSAARR---VFDHTHDC-NVFSFNTLISAYA 85

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K   ++    +  +MP  D  S N L+A YA+      AF  FL++    +  + +T S 
Sbjct: 86  KESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSG 145

Query: 224 MLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           ++  CG    I+ G  +QLHA ++     S  +V NAL+T Y K G +++A  +F  L +
Sbjct: 146 IITACG----INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSE 201

Query: 282 -RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+ +SW +++  + QH +  K L L   M   G+  + +T    L +  ++++   G  
Sbjct: 202 DRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQ 261

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGE-IWEAKKQLKEMGKSASSVSWNAQIAGF-FR 398
           FHA++IK G      VG+ ++D+YS  G  + + +K   E+  +   V WN  I+G+   
Sbjct: 262 FHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI-SNPDLVLWNTMISGYSLY 320

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN-VH 457
              ++EA+E F Q+       D+ +   ++ ACS + S +   Q+H   +K    SN + 
Sbjct: 321 EDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRIS 380

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V ++LI  Y+KCG+  DA+ +F  +   + VS+NSMI  Y+Q+G   +++ LF++M+   
Sbjct: 381 VNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMD 440

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             PTN TF++VL+AC+H+G V+DG+  F  M +++GI PE  H+SCM+DLLGRAGKL  A
Sbjct: 441 FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEA 500

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
              I  +P  P    W  L  ACR H ++++A   + ++L+LDP +AA YV L+N+Y++ 
Sbjct: 501 ERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDN 560

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   DA   RKLM+ + + K+PGCSWIEV  +I+ F +++  H  + K+ E L+++M++I
Sbjct: 561 GRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKI 620

Query: 698 EDIGHT---------------DNEKEDRVLYHSERLAVGFGLIS 726
           + +G+T                 E+E R+ +HSE+LAV FGL+S
Sbjct: 621 KKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMS 664



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 214/477 (44%), Gaps = 38/477 (7%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC------------ 266
           +++   L  C +   +  GK LHA  +K    + T +SN  L +Y KC            
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 267 -------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                                +E A  +F+ + Q + +S+  +I  + + GD +   +L 
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             MRE  +D + +T +  + +C    N  +    HA  +  G+     VG A++  YS  
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKN 186

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G + EA++    + +    VSWN+ +  + ++++  +A+E + +M       D FT +S+
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS-WEDAERVFSQLTAAD 486
           L A + +  L    Q H++++KS +  N HVGS LI+ Y+KCG    D  +VF +++  D
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPD 306

Query: 487 VVSWNSMIKAYS-QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +V WN+MI  YS     + +A+  F ++   G RP + + + V+SACS+      G++V 
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
              +K        +  + ++ +  + G L  A      +P   T   +  + A    H  
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVS-YNSMIAGYAQHGM 425

Query: 606 LKMAEFISKQILELDPDDAAV-YVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPG 660
              +  + +++LE+D     + ++++    A  G   D +    +MK K  I  E G
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/578 (32%), Positives = 321/578 (55%), Gaps = 10/578 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G + H+L  +    GD ++ + L+ MY++CG + +   V  +M   D+
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
                L++ + +N  F+ A    +++    ++PN +T +T+L  C  +     G+Q+H  
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGY 236

Query: 244 TMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +K   L   +V  S AL+  Y + G  + A++VF+ L  +NV+SW +++  + + G  E
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L++   M  +G+DPNE+  ++ L +C S+    +G   H   IK  +     V  A++
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACGSI---GLGRQLHCSAIKHDLITDIRVSNALL 353

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY   G + E +  L ++ ++   VSW   I+  F+N   E+AI    QM       + 
Sbjct: 354 SMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 412

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           + +SS+L +C+ + SL    Q H   +K   +S +  G++LI  Y+KCG    A   F  
Sbjct: 413 YAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDV 472

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DV SWNS+I  ++Q+G A KA+ +F KM   GI+P +STFL VL  C+HSG+V++G
Sbjct: 473 MHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG 532

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F  M+ +Y   P  +HY+CM+D+LGR G+ + AL  I+++P +P A IW+ L A+C+
Sbjct: 533 ELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCK 592

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L + +  + +++EL   D+A YV +SN+YA  G   DA + R+ M    + K+ GC
Sbjct: 593 LHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGC 652

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIE+ N+++ F S++ SH     +Y+ L +L+  ++D
Sbjct: 653 SWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 274/591 (46%), Gaps = 30/591 (5%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  +    +N   K G +   + +  +MP  ++ +   +++GY +N   + A + F  + 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V PN +  +  L  C  L A+  G+Q+H+  ++  +     + + L+ MY +CG + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A+ VF+ +   +V+ +T++I+ F ++G++E     +  M + G+ PNE+T T  L +C 
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 331 SLRNSHMGYMFHAQVIKR-GM-ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            +    +G   H  +IK+ G+ +   +  TA++D YS  GE   AK     +    + VS
Sbjct: 227 RV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL-HCKNVVS 281

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W + +  + R+ + EEA++ F  M+      +EF  S +L AC    S+    Q+H   +
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAI 338

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K    +++ V ++L+  Y + G  E+ E + +++   D+VSW + I A  QNG   KAI 
Sbjct: 339 KHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           L  +M  EG  P    F +VLS+C+    +  G + F  +  + G   E    + ++++ 
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMY 457

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAV 626
            + G++  A +    +        W  L      H D   A E  SK     + PDD+  
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTS-WNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTF 516

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS----WIEVYNKIYRFFSQNKSHSE 682
              L      +G+  + E   +LM + + S  P  S     I++  +  RF    +  ++
Sbjct: 517 LGVLMGC-NHSGMVEEGELFFRLM-IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMIND 574

Query: 683 MPKVYEKL--KQLMQQIE-----DIGHTDNEKEDRVLYHSERLAVGFGLIS 726
           MP   + L  K L+   +     DIG       DR++  S+R +  + L+S
Sbjct: 575 MPFEPDALIWKTLLASCKLHRNLDIGKL---AADRLMELSDRDSASYVLMS 622



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 51/303 (16%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYL 181
           VLS C+    L+ G ++H L  K   C  +  T  +L+NMY+KCG + S       M   
Sbjct: 418 VLSSCADVASLDQGMQFHCLALKLG-CDSEICTGNALINMYSKCGQMGSARLAFDVMHTH 476

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N L+ G+A++   ++A   F K+    ++P+  T+  +L  C     ++EG +L 
Sbjct: 477 DVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG-ELF 535

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            + M  QY    A S+                             +  +I+   ++G ++
Sbjct: 536 FRLMIDQYSFTPAPSH-----------------------------YACMIDMLGRNGRFD 566

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + LR++  M     +P+   +   LASC   RN  +G +       R M L D    + V
Sbjct: 567 EALRMINDMP---FEPDALIWKTLLASCKLHRNLDIGKL----AADRLMELSDRDSASYV 619

Query: 362 ---DMYSGLGEIWE----AKKQLKEMG-KSASSVSW---NAQIAGFFRNQKTEEAIEAFS 410
              ++Y+  GE WE     ++++ E G K  +  SW   N ++  F     +    ++  
Sbjct: 620 LMSNIYAMHGE-WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIY 678

Query: 411 QMV 413
           QM+
Sbjct: 679 QML 681


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/635 (31%), Positives = 350/635 (55%), Gaps = 27/635 (4%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           E L +G++ HA   +     + F+  +LV MY K G + S   ++      D+ + N +L
Sbjct: 212 EGLLMGKQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVL 270

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           +   +N  F +A  +  ++    V+P+ +T S++L  C  L  +  GK+LHA  +K   L
Sbjct: 271 SSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSL 330

Query: 251 SKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            + + V +AL+ MY  C  +     VF+G+  R +  W A+I G+ Q+   E+ L L   
Sbjct: 331 DENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIE 390

Query: 310 MRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           M E  G+  N  T    + +C            H  V+KRG+    FV  A++DMYS LG
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-----------VRNDA 417
           +I  AK+   +M +    V+WN  I G+  +++ E+A+    +M            R   
Sbjct: 451 KIDIAKRIFGKM-EDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSL 509

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T  +IL +C+ L +LA  ++IH+  +K+   ++V VGS+L++ Y KCG  + + +
Sbjct: 510 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 569

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF Q+   +V++WN ++ AY  +G ++ AI +   M+V+G++P   TF++V +ACSHSG+
Sbjct: 570 VFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGM 629

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK-PTAPIWRPL 596
           V +G K+F +M K+YG+ P   HY+C+VDLLGRAG+++ A   I+ +P     A  W  L
Sbjct: 630 VNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSL 689

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H++L++ E  ++ +++L+P+ A+ YV L+N+Y+ AGL   A E R+ MK + + 
Sbjct: 690 LGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVR 749

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           KEPGCSWIE  +++++F + + SH +  K+   L+ L +++   G+            ++
Sbjct: 750 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEED 809

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           EKE  +  HSE+LA+ FG+++         ++ L 
Sbjct: 810 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 844



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/490 (23%), Positives = 239/490 (48%), Gaps = 21/490 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           ++LG++ HA + K     D    A +LVN+Y KCGD  ++  V  ++   +  S N L++
Sbjct: 109 MDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 168

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL---SAIDEGKQLHAQTMKLQ 248
                  ++ A   F  +   DV+P+ +T  ++   C +      +  GKQ+HA  ++  
Sbjct: 169 SLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG 228

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            L+ + + N L+ MY K G +  ++ +      R++++W  +++   Q+  + + L  + 
Sbjct: 229 ELN-SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLR 287

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGL 367
            M  +G++P+ +T +  L +C+ L     G   HA  +K G +    FVG+A+VDMY   
Sbjct: 288 EMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 347

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSS 426
            ++    +    M      + WNA I G+ +N+  EEA+  F +M  +     +  T + 
Sbjct: 348 KQVLSGCRVFDGMFDRKIGL-WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAG 406

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ++ AC    + +  E IH  +VK   + +  V ++L++ Y++ G  + A+R+F ++   D
Sbjct: 407 VVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRD 466

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKM-VVE----------GIRPTNSTFLAVLSACSHS 535
           +V+WN++I  Y  + R   A+++  KM ++E           ++P + T + +L +C+  
Sbjct: 467 LVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAAL 526

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G+++    +K   +  + A  S +VD+  + G L+++      +PI+     W  
Sbjct: 527 SALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNV 584

Query: 596 LFAACRCHSD 605
           +  A   H +
Sbjct: 585 IVMAYGMHGN 594



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 197/395 (49%), Gaps = 9/395 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           LL    ++ L  +A   ++ +  + ++P+++ +  +L     L  +D GKQ+HA   K  
Sbjct: 64  LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123

Query: 249 Y-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
           Y +    V+N L+ +Y KCG       VF+ + +RN +SW ++I+       +E  L   
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSH---MGYMFHAQVIKRGMALGDFVGTAIVDMY 364
             M ++ ++P+ +T      +C++        MG   HA  +++G  L  F+   +V MY
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMY 242

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
             +G++  +K  L    +    V+WN  ++   +N++  EA+E   +MV      D FT 
Sbjct: 243 GKMGKLASSKVLLGSF-EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           SS+L ACS L  L T +++H+  +K+   + N  VGS+L++ Y  C       RVF  + 
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMF 361

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +  WN+MI  Y+QN    +A++LF +M    G+   ++T   V+ AC  SG     +
Sbjct: 362 DRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKE 421

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            +   +VK  G+  +    + ++D+  R GK++IA
Sbjct: 422 AIHGFVVKR-GLDRDRFVQNALMDMYSRLGKIDIA 455



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 15/254 (5%)

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           K + +S S   W   +    R+    EA+  +  M+      D F + ++LKA + L  +
Sbjct: 50  KFISQSHSPEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDM 109

Query: 438 ATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
              +QIH+ + K  +   +V V ++L+  Y KCG +    +VF +++  + VSWNS+I +
Sbjct: 110 DLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISS 169

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH----SGLVQDGQKVFESMVKEY 552
                +   A+  F  M+ E + P++ T ++V  ACS+     GL+   Q      V  Y
Sbjct: 170 LCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQ------VHAY 223

Query: 553 GILPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           G+   E +    + +V + G+ GKL  + + + +   +        L + C+    L+  
Sbjct: 224 GLRKGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEAL 283

Query: 610 EFISKQILE-LDPD 622
           E++ + +LE ++PD
Sbjct: 284 EYLREMVLEGVEPD 297


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 189/580 (32%), Positives = 330/580 (56%), Gaps = 1/580 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ +  L  G + H+L  K  +  +  V  +L+ MYAKC  +     + + MP  D+
Sbjct: 249 LSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDL 308

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++G  +N LF +AF  F  +     +P+  T  ++L     L+ + +GK++H  
Sbjct: 309 VTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGY 368

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++        + +AL+ +Y KC  +  A+++++     +V+  + +I+G+  +G  E+ 
Sbjct: 369 IVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEA 428

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L++   + E  I PN  T    L  CAS+    +G   H  V++       +V +A++DM
Sbjct: 429 LQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDM 488

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G +  +     +M +    V+WN+ I+ F +N K +EA++ F QM       +  T
Sbjct: 489 YAKCGRLDLSHYIFLKMSQK-DEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNIT 547

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            S+ L AC+ LP++   ++IH   +K   ++++   S+LI+ Y KCG+ E A RVF  + 
Sbjct: 548 ISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMP 607

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + VSWNS+I AY  +G  ++++ L   M  EG +P + TFLA++SAC+H+GLV++G +
Sbjct: 608 DKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQ 667

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F+ M K+Y I P   H++CMVDL  R+GKL+ A+ FI+++P KP A IW  L  ACR H
Sbjct: 668 LFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVH 727

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++A+  S+++ +LDP ++  YV +SN+ A AG      + R+LMK  +I K PG SW
Sbjct: 728 RNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSW 787

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
           ++V N  + F + +KSH E   +Y  LK L+Q++ + G+ 
Sbjct: 788 VDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYV 827



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 266/543 (48%), Gaps = 12/543 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+  C+    + LGR  H       +  D +V ++LV MYA  G + +     
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  D    N ++ G  K    D A   F  +     +PN  T +  L++C + + + 
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH+  +K     + AV+N LL MY KC  ++DA  +FE + Q ++++W  +I+G  
Sbjct: 260 SGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCV 319

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G + +   L   M+  G  P+  T    L +   L     G   H  +++  + +  F
Sbjct: 320 QNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVF 379

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A+VD+Y    ++  A + L +  ++   V  +  I+G+  N  +EEA++ F  ++  
Sbjct: 380 LVSALVDIYFKCRDVRMA-QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQ 438

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T +S+L  C+ + +L   +QIH  ++++ +E   +V S+L++ Y KCG  + +
Sbjct: 439 CIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLS 498

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F +++  D V+WNSMI ++SQNG+ ++A+ LF +M +EGI+  N T  A LSAC+  
Sbjct: 499 HYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASL 558

Query: 536 GLVQDGQKVFESMVK---EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             +  G+++    +K   +  I  E A    ++D+  + G LE+AL     +P K     
Sbjct: 559 PAIYYGKEIHGVTIKGPIKADIFAESA----LIDMYAKCGNLELALRVFEFMPDKNEVS- 613

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           W  + +A   H  +K +  +   + E    PD    ++ L +  A AGL  +  +  + M
Sbjct: 614 WNSIISAYGAHGLVKESVSLLHGMQEEGYKPDH-VTFLALISACAHAGLVEEGVQLFQCM 672

Query: 651 KMK 653
             K
Sbjct: 673 TKK 675



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 225/491 (45%), Gaps = 21/491 (4%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ---FVTA 156
           CS T   T  ++  +     ++ VL  C     L LG + HA    +    D     +  
Sbjct: 16  CSTTFSATA-AVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHT 74

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASC---NCLLAGYAKNALFDQAFSFFLKL--DG 211
            L+ MY      +  VAV   +P    AS    N L+ G+        A  F++K+    
Sbjct: 75  RLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHP 134

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
               P+ +T   ++  C +L A+  G+ +H     +   +   V +AL+ MY   G++ +
Sbjct: 135 AAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGN 194

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A   F+G+ +R+ + W  +++G  + GD +  +RL   MR  G +PN  T    L+ CA+
Sbjct: 195 ARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCAT 254

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG---LGEIWEAKKQLKEMGKSASSVS 388
             +   G   H+  +K G+     V   ++ MY+    L + W    +L E+      V+
Sbjct: 255 DADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAW----RLFELMPQDDLVT 310

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN  I+G  +N    EA   F  M R+ A  D  T  S+L A + L  L   +++H  IV
Sbjct: 311 WNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIV 370

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           ++    +V + S+L++ Y KC     A+ ++    A DVV  ++MI  Y  NG + +A+ 
Sbjct: 371 RNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQ 430

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVD 566
           +F  ++ + I+P   T  +VL  C+    +  GQ++   +++      E   Y  S ++D
Sbjct: 431 MFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAY---ERKCYVESALMD 487

Query: 567 LLGRAGKLEIA 577
           +  + G+L+++
Sbjct: 488 MYAKCGRLDLS 498



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 153/311 (49%), Gaps = 23/311 (7%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL  C+    L LG++ H  + + A     +V ++L++MYAKCG +     +  +M 
Sbjct: 447 IASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMS 506

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N +++ +++N    +A   F ++    ++ N+ T S  L+ C SL AI  GK+
Sbjct: 507 QKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKE 566

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  T+K    +     +AL+ MY KCG +E A  VFE +  +N +SW +II+ +  HG 
Sbjct: 567 IHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGL 626

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
            ++ + L+  M+E+G  P+  TF   +++CA           HA +++ G+ L   +   
Sbjct: 627 VKESVSLLHGMQEEGYKPDHVTFLALISACA-----------HAGLVEEGVQLFQCMTKK 675

Query: 358 ----------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                       +VD+YS  G++ +A + + +M     +  W A +     ++  E A  
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735

Query: 408 AFSQMVRNDAA 418
           A  ++ + D A
Sbjct: 736 ASQELFKLDPA 746


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 184/521 (35%), Positives = 302/521 (57%), Gaps = 13/521 (2%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA+ +  +Y     +   L+TMY++CG ++DA +V + 
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R+V+SWT +I+G+ Q   + + L L   M   G  PNEYT    L SC+  ++ + G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H+ ++K       FVG++++DMY+    I EA++    + +    VS  A I+G+ +
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER-DVVSCTAIISGYAQ 189

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               EEA++ F Q+      C+  T+++++ A S L SL   +Q+H+ I++ +    V +
Sbjct: 190 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SLI+ Y+KCG    + RVF  +    VVSWN+M+  Y ++G   + I LF+ +  E +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-V 308

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P + T LAVLS CSH GLV +G  +F+++VKE   L    HY C++DLLGR+G+LE AL
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I N+P + T  IW  L  ACR H+++ + E +++++LE++P++A  YV LSN+YA AG
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 428

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           +  D  + RKLM  K ++KEPG SWI +   I+ F S  + H     +  K+K++   I+
Sbjct: 429 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
             G             D +KE  +L HSE+LA+ FGL++ P
Sbjct: 489 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTP 529



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 173/358 (48%), Gaps = 40/358 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ CS  + +  G++ H+L+ KT      FV +SL++MYAK  +I+    V   +P  D
Sbjct: 117 VLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + SC  +++GYA+  L ++A   F +L    +Q NH T++T++     L+++D GKQ+HA
Sbjct: 177 VVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHA 236

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +     A+ N+L+ MY KCG +  +  VF+ +++R+V+SW A++ G+ +HG   +
Sbjct: 237 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 296

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   + ++ + P+  T    L+ C+           H  ++  G+ + D V      
Sbjct: 297 VISLFKDLHKE-VKPDSVTLLAVLSGCS-----------HGGLVDEGLDIFDTV------ 338

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                         +KE      +  +   I    R+ + E+A+     M          
Sbjct: 339 --------------VKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS--- 381

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EAYNKCGSWEDAERV 478
            + S+L AC +  ++   E +  ++++ + E+    G+ +I    Y   G W+D  +V
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLEMEPEN---AGNYVILSNIYAAAGMWKDVFKV 436


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 184/521 (35%), Positives = 302/521 (57%), Gaps = 13/521 (2%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA+ +  +Y     +   L+TMY++CG ++DA +V + 
Sbjct: 43  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R+V+SWT +I+G+ Q   + + L L   M   G  PNEYT    L SC+  ++ + G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H+ ++K       FVG++++DMY+    I EA++    + +    VS  A I+G+ +
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER-DVVSCTAIISGYAQ 221

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               EEA++ F Q+      C+  T+++++ A S L SL   +Q+H+ I++ +    V +
Sbjct: 222 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 281

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SLI+ Y+KCG    + RVF  +    VVSWN+M+  Y ++G   + I LF+ +  E +
Sbjct: 282 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-V 340

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P + T LAVLS CSH GLV +G  +F+++VKE   L    HY C++DLLGR+G+LE AL
Sbjct: 341 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 400

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I N+P + T  IW  L  ACR H+++ + E +++++LE++P++A  YV LSN+YA AG
Sbjct: 401 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 460

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           +  D  + RKLM  K ++KEPG SWI +   I+ F S  + H     +  K+K++   I+
Sbjct: 461 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 520

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
             G             D +KE  +L HSE+LA+ FGL++ P
Sbjct: 521 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTP 561



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 156/297 (52%), Gaps = 4/297 (1%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           L  R ++   A   G      +  PLR    M   G     + +  A+ +C   R    G
Sbjct: 2   LAARGLLRPEAAARGLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEG 61

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              HA++I        F+GT +V MY   G + +A+  L  M +  S VSW   I+G+ +
Sbjct: 62  RQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER-SVVSWTTMISGYSQ 120

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
            ++  EA++ F +M+R     +E+T +++L +CS   S+   +Q+HS +VK+ FES++ V
Sbjct: 121 TERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFV 180

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           GSSL++ Y K  + ++A RVF  L   DVVS  ++I  Y+Q G   +A+ LF ++  EG+
Sbjct: 181 GSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGM 240

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP-EEAHYSCMVDLLGRAGKL 574
           +  + TF  +++A S    +  G++V   ++++   LP   A  + ++D+  + GKL
Sbjct: 241 QCNHVTFTTLVTALSGLASLDYGKQVHALILRKE--LPFFVALQNSLIDMYSKCGKL 295



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 225/505 (44%), Gaps = 79/505 (15%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ CS  + +  G++ H+L+ KT      FV +SL++MYAK  +I+    V   +P  D
Sbjct: 149 VLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 208

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + SC  +++GYA+  L ++A   F +L    +Q NH T++T++     L+++D GKQ+HA
Sbjct: 209 VVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHA 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +     A+ N+L+ MY KCG +  +  VF+ +++R+V+SW A++ G+ +HG   +
Sbjct: 269 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 328

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   + ++ + P+  T    L+ C+           H  ++  G+ + D V      
Sbjct: 329 VISLFKDLHKE-VKPDSVTLLAVLSGCS-----------HGGLVDEGLDIFDTV------ 370

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                         +KE      +  +   I    R+ + E+A+     M          
Sbjct: 371 --------------VKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS--- 413

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EAYNKCGSWEDAERVFS 480
            + S+L AC +  ++   E +  ++++ + E+    G+ +I    Y   G W+D  +V  
Sbjct: 414 IWGSLLGACRVHANVHVGELVAQKLLEMEPEN---AGNYVILSNIYAAAGMWKDVFKVRK 470

Query: 481 QLTAADVV-----SW---NSMIKAYSQNGR---ARKAIILFEKMVVEGIRPTNSTFLAVL 529
            +    V      SW   + +I  +  + R   ++K I    K +   I+     F+  L
Sbjct: 471 LMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG--FVPDL 528

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           S   H   V D QK  E M                  LLG + KL I    + N P   T
Sbjct: 529 SCVLHD--VDDEQK--ERM------------------LLGHSEKLAITFGLM-NTPPGLT 565

Query: 590 APIWRPLFAACRCHSDLKMAEFISK 614
             + + L     CH+    A+F+SK
Sbjct: 566 IRVMKNLRICVDCHN---FAKFVSK 587



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 7/183 (3%)

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           + A S M    A+     Y + + AC    +L    Q+H+R++ +++   V +G+ L+  
Sbjct: 27  LRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTM 86

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y +CG+ +DA  V  ++    VVSW +MI  YSQ  R  +A+ LF KM+  G  P   T 
Sbjct: 87  YVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTL 146

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIALIFIS 582
             VL++CS    +  G++V   +VK       E+H    S ++D+  ++  ++ A     
Sbjct: 147 ATVLTSCSGPQSIYQGKQVHSLLVKT----NFESHMFVGSSLLDMYAKSENIQEARRVFD 202

Query: 583 NLP 585
            LP
Sbjct: 203 TLP 205


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 190/583 (32%), Positives = 328/583 (56%), Gaps = 17/583 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L++MY KC +      V   MP  ++ S + L++G+  N     + S F ++    + PN
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +T+ST L  CG L+A+++G Q+H   +K+ +     V N+L+ MY KCG + +AE VF 
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID--PNEYTFTVALASCASLRNS 335
            +V R++ISW A+I GF   G   K L    +M+E  I   P+E+T T  L +C+S    
Sbjct: 538 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597

Query: 336 HMGYMFHAQVIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           + G   H  +++ G        +  ++VD+Y   G ++ A+K   ++ K  + +SW++ I
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLI 656

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G+ +  +  EA+  F ++   ++  D F  SSI+   +    L   +Q+ +  VK    
Sbjct: 657 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 716

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
               V +S+++ Y KCG  ++AE+ F+++   DV+SW  +I  Y ++G  +K++ +F +M
Sbjct: 717 LETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEM 776

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +   I P    +LAVLSACSHSG++++G+++F  +++ +GI P   HY+C+VDLLGRAG+
Sbjct: 777 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 836

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L+ A   I  +PIKP   IW+ L + CR H D+++ + + K +L +D  + A YV +SN+
Sbjct: 837 LKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNL 896

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           Y +AG   +    R+L  +K + KE G SW+E+  +++ F S   SH   P + E LK+ 
Sbjct: 897 YGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEA 956

Query: 694 MQQI-EDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
            +++ E++G+            D  KE+ +  HSE+LA+G  L
Sbjct: 957 ERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLAL 999



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 16/400 (4%)

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            SN L+ MY KC     A  VF+ + +RNV+SW+A+++G   +GD +  L L   M   G
Sbjct: 414 TSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG 473

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I PNE+TF+  L +C  L     G   H   +K G  +   VG ++VDMYS  G I EA+
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA--CDEFTYSSILKACS 432
           K  + +    S +SWNA IAGF       +A++ F  M   +     DEFT +S+LKACS
Sbjct: 534 KVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS 592

Query: 433 LLPSLATCEQIHSRIVKSKFE--SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
               +   +QIH  +V+S F   S+  +  SL++ Y KCG    A + F Q+    ++SW
Sbjct: 593 STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISW 652

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +S+I  Y+Q G   +A+ LF+++     +  +    +++   +   L++ G+++    VK
Sbjct: 653 SSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK 712

Query: 551 EYGILP---EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
               LP   E +  + +VD+  + G ++ A    + + +K     W  +      H   K
Sbjct: 713 ----LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHGLGK 767

Query: 608 MAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +  I  ++L   ++PD+   Y+ + +  + +G+  + EE
Sbjct: 768 KSVRIFYEMLRHNIEPDEVC-YLAVLSACSHSGMIKEGEE 806



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 237/543 (43%), Gaps = 77/543 (14%)

Query: 40  KEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKG-ISRNGYSTRNDSFPDGFIDD 98
           +EP  +Y   ++F+  P+R  +S S L+    +N + KG +S      R   +P+ F   
Sbjct: 426 REPLMAY---KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFT-- 480

Query: 99  GCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASL 158
                     +S             L  C     LE G + H    K        V  SL
Sbjct: 481 ----------FSTN-----------LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL 519

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQP 216
           V+MY+KCG I     V +++    + S N ++AG+       +A   F  ++   I  +P
Sbjct: 520 VDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERP 579

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL--SKTAVSNALLTMYIKCGMMEDAES 274
           + +T +++L  C S   I  GKQ+H   ++  +   S   ++ +L+ +Y+KCG +  A  
Sbjct: 580 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARK 639

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
            F+ + ++ +ISW+++I G+ Q G++ + + L   ++E     + +  +  +   A    
Sbjct: 640 AFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFAL 699

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G    A  +K    L   V  ++VDMY   G + EA+K   EM +    +SW   I 
Sbjct: 700 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM-QLKDVISWTVVIT 758

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+ ++   ++++  F +M+R++   DE  Y ++L ACS           HS ++K     
Sbjct: 759 GYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS-----------HSGMIK----- 802

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD-----VVSWNSMIKAYSQNGRARKAIIL 509
                              + E +FS+L         V  +  ++    + GR ++A  L
Sbjct: 803 -------------------EGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 843

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
            + M    I+P    +  +LS C   G ++ G++V + +++     P  A+Y  M +L G
Sbjct: 844 IDTM---PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP--ANYVMMSNLYG 898

Query: 570 RAG 572
           +AG
Sbjct: 899 QAG 901



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 17/131 (12%)

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N+   + LI+ Y KC     A +VF  +   +VVSW++++  +  NG  + ++ LF +M 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKV--------FESMVKEYGILPEEAHYSCMVD 566
            +GI P   TF   L AC     ++ G ++        FE MV E G        + +VD
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV-EVG--------NSLVD 521

Query: 567 LLGRAGKLEIA 577
           +  + G++  A
Sbjct: 522 MYSKCGRINEA 532


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 184/521 (35%), Positives = 302/521 (57%), Gaps = 13/521 (2%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA+ +  +Y     +   L+TMY++CG ++DA +V + 
Sbjct: 11  HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R+V+SWT +I+G+ Q   + + L L   M   G  PNEYT    L SC+  ++ + G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H+ ++K       FVG++++DMY+    I EA++    + +    VS  A I+G+ +
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPER-DVVSCTAIISGYAQ 189

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               EEA++ F Q+      C+  T+++++ A S L SL   +Q+H+ I++ +    V +
Sbjct: 190 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SLI+ Y+KCG    + RVF  +    VVSWN+M+  Y ++G   + I LF+ +  E +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-V 308

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P + T LAVLS CSH GLV +G  +F+++VKE   L    HY C++DLLGR+G+LE AL
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I N+P + T  IW  L  ACR H+++ + E +++++LE++P++A  YV LSN+YA AG
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 428

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           +  D  + RKLM  K ++KEPG SWI +   I+ F S  + H     +  K+K++   I+
Sbjct: 429 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
             G             D +KE  +L HSE+LA+ FGL++ P
Sbjct: 489 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTP 529



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 225/505 (44%), Gaps = 79/505 (15%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ CS  + +  G++ H+L+ KT      FV +SL++MYAK  +I+    V   +P  D
Sbjct: 117 VLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + SC  +++GYA+  L ++A   F +L    +Q NH T++T++     L+++D GKQ+HA
Sbjct: 177 VVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHA 236

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +     A+ N+L+ MY KCG +  +  VF+ +++R+V+SW A++ G+ +HG   +
Sbjct: 237 LILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHE 296

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   + ++ + P+  T    L+ C+           H  ++  G+ + D V      
Sbjct: 297 VISLFKDLHKE-VKPDSVTLLAVLSGCS-----------HGGLVDEGLDIFDTV------ 338

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                         +KE      +  +   I    R+ + E+A+     M          
Sbjct: 339 --------------VKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS--- 381

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EAYNKCGSWEDAERVFS 480
            + S+L AC +  ++   E +  ++++ + E+    G+ +I    Y   G W+D  +V  
Sbjct: 382 IWGSLLGACRVHANVHVGELVAQKLLEMEPEN---AGNYVILSNIYAAAGMWKDVFKVRK 438

Query: 481 QLTAADVV-----SW---NSMIKAYSQNGR---ARKAIILFEKMVVEGIRPTNSTFLAVL 529
            +    V      SW   + +I  +  + R   ++K I    K +   I+     F+  L
Sbjct: 439 LMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG--FVPDL 496

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           S   H   V D QK  E M                  LLG + KL I    + N P   T
Sbjct: 497 SCVLHD--VDDEQK--ERM------------------LLGHSEKLAITFGLM-NTPPGLT 533

Query: 590 APIWRPLFAACRCHSDLKMAEFISK 614
             + + L     CH+    A+F+SK
Sbjct: 534 IRVMKNLRICVDCHN---FAKFVSK 555



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 145/262 (55%), Gaps = 4/262 (1%)

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G     + +  A+ +C   R    G   HA++I        F+GT +V MY   G + +A
Sbjct: 5   GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +  L  M +  S VSW   I+G+ + ++  EA++ F +M+R     +E+T +++L +CS 
Sbjct: 65  RNVLDRMPER-SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSG 123

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             S+   +Q+HS +VK+ FES++ VGSSL++ Y K  + ++A RVF  L   DVVS  ++
Sbjct: 124 PQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAI 183

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+Q G   +A+ LF ++  EG++  + TF  +++A S    +  G++V   ++++  
Sbjct: 184 ISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKE- 242

Query: 554 ILP-EEAHYSCMVDLLGRAGKL 574
            LP   A  + ++D+  + GKL
Sbjct: 243 -LPFFVALQNSLIDMYSKCGKL 263


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 202/614 (32%), Positives = 338/614 (55%), Gaps = 9/614 (1%)

Query: 109  YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
            Y+L++  D+   + +L  C+      LG++ H +  K  +    FV  + ++MY+K G I
Sbjct: 420  YTLQT--DEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAI 477

Query: 169  KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                A+   +PY D  S N L  G A+N   ++A     ++    + P+  ++ST +  C
Sbjct: 478  GDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINAC 537

Query: 229  GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             ++ A + GKQ+H   +K    S  AV ++L+ +Y K G +E +  +F  +   +++   
Sbjct: 538  SNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597

Query: 289  AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            A+I GF Q+ + ++ ++L   + +DG+ P+  TF+  L+ C+   NS +G   H   +K 
Sbjct: 598  ALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKS 657

Query: 349  GMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+   D  +G ++  +Y     + +A K L EM    +   W A I+G+ +N   + ++ 
Sbjct: 658  GVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLV 717

Query: 408  AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            +F +M   +   DE T++S+LKACS + + A  ++IH  I KS F S     S+LI+ Y+
Sbjct: 718  SFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYS 777

Query: 468  KCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG    +   F +L    D++ WNSMI  +++NG A +A++LF+KM    I+P   TFL
Sbjct: 778  KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837

Query: 527  AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
             VL AC+HSGL+ +G+  F  M K YG+ P   HY+C +DLLGR G L+ A   I  LP 
Sbjct: 838  GVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897

Query: 587  KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
            +P   +W    AACR H D +  +  +++++EL+P  ++ YV LS+++A  G  A+A+  
Sbjct: 898  RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957

Query: 647  RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
            R+ M+ K ++K PGCSWI V NK   F  Q+K H +  ++YE L  L   ++     DN+
Sbjct: 958  RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKK----DND 1013

Query: 707  -KEDRVLYHSERLA 719
              E  +LY +E LA
Sbjct: 1014 IDEYGLLYSAEMLA 1027



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 220/406 (54%), Gaps = 5/406 (1%)

Query: 130 EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           +E L L  R    + K     DQ    ++++  A  G +    A++K+MP     + N +
Sbjct: 241 QEALALFSR----MDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAV 296

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G+A++ L       +  +    + P   T+++ML+   ++ A  EG+Q+HA  +    
Sbjct: 297 ISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGL 356

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            +   V ++L+ +Y KCG   DA++VF+   ++N++ W A++ GF Q+   E+ +R+   
Sbjct: 357 DANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQY 416

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M    +  +E+TF   L +C  L + ++G   H   IK  M +  FV  A +DMYS  G 
Sbjct: 417 MMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGA 476

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           I +AK  L  +     S+SWNA   G  +N + EEA+    +M  +    D+ ++S+ + 
Sbjct: 477 IGDAKA-LFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAIN 535

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS + +  T +QIH   +K    SN  VGSSLI+ Y+K G  E + ++F+Q+ A+ +V 
Sbjct: 536 ACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVP 595

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            N++I  + QN    +AI LF++++ +G++P++ TF ++LS CS S
Sbjct: 596 INALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS 641



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 251/492 (51%), Gaps = 6/492 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ HA      +  + FV +SL+N+YAKCG       V       +I   N +L G+ +
Sbjct: 344 GQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQ 403

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++A   F  +    +Q + +T+ ++L  C  LS+   GKQ+H  T+K        V
Sbjct: 404 NELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFV 463

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +NA L MY K G + DA+++F  +  ++ ISW A+  G  Q+ + E+ + ++  MR  GI
Sbjct: 464 ANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGI 523

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P++ +F+ A+ +C+++R +  G   H   IK G+     VG++++D+YS  G++  ++K
Sbjct: 524 TPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRK 583

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              ++  S S V  NA IAGF +N   +EAI+ F Q++++       T+SSIL  CS   
Sbjct: 584 IFAQVDAS-SIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSL 642

Query: 436 SLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
           + A  +Q+H   +KS     +  +G SL   Y K    EDA ++ +++    ++  W ++
Sbjct: 643 NSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAI 702

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+QNG    +++ F +M    +R   +TF +VL ACS      DG+++   ++ + G
Sbjct: 703 ISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI-HGLITKSG 761

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEF 611
               E   S ++D+  + G +  +      L  K     W  +    A   ++D  +  F
Sbjct: 762 FGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLF 821

Query: 612 ISKQILELDPDD 623
              + L++ PD+
Sbjct: 822 QKMEELQIKPDE 833



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 227/470 (48%), Gaps = 37/470 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS CSR   L  GR+ H  + K+      F  A+LV+MYAKCGD+ +   V   +   D
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
               + ++A Y +   + +A + F ++D +   P+  T  T+++   S            
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS------------ 271

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                                   G ++ A ++ + +   + ++W A+I+G  Q G    
Sbjct: 272 -----------------------SGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   MR  G+ P   TF   L++ A+++    G   HA  +  G+    FVG+++++
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G   +AK    ++    + V WNA + GF +N+  EEAI  F  M+R     DEF
Sbjct: 369 LYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ SIL AC+ L S    +Q+H   +K+  + ++ V ++ ++ Y+K G+  DA+ +FS +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D +SWN++    +QN    +A+ + ++M + GI P + +F   ++ACS+    + G+
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           ++   +  +YGI    A  S ++DL  + G +E +    + +      PI
Sbjct: 548 QI-HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPI 596



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 181/395 (45%), Gaps = 37/395 (9%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQ 215
           SLV +Y K G +    + +         + + LL+ +A++         F  +      +
Sbjct: 96  SLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ +  + +L+ C  +  +  G+Q+H   +K  + S      AL+ MY KCG + +A  V
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRV 215

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+   + I W+++I  + + G Y++ L L   M + G  P++ T    +++ AS    
Sbjct: 216 FDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS---- 271

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G + HA  +                              LK+M  + S+V+WNA I+G
Sbjct: 272 -SGRLDHATAL------------------------------LKKM-PTPSTVAWNAVISG 299

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             ++      +  +  M          T++S+L A + + +    +Q+H+  V    ++N
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGSSLI  Y KCG   DA+ VF      ++V WN+M+  + QN    +AI +F+ M+ 
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             ++    TF+++L AC++      G++V    +K
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK 454



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 34/386 (8%)

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           AS    R+S      H ++++ G  L   +G ++V++Y   G +  A   L   G+ AS 
Sbjct: 64  ASPPRARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASG 123

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIH 444
            + ++ ++   R+    + + AF + +R  A    D+F  + +L ACS +  LA   Q+H
Sbjct: 124 AA-SSLLSCHARSGSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVH 181

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +VKS F S+V   ++L++ Y KCG   +A RVF  +   D + W+SMI  Y + G  +
Sbjct: 182 CDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQ 241

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ LF +M   G  P   T + ++S  + SG +     + + M       P    ++ +
Sbjct: 242 EALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT-----PSTVAWNAV 296

Query: 565 VDLLGRAGKLEIALIFI----SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE-- 618
           +    ++G LE  ++ +     +  + PT   +  + +A        M  F+  Q +   
Sbjct: 297 ISGHAQSG-LEFNVLGLYKDMRSWGLWPTRSTFASMLSAAA-----NMKAFVEGQQMHAA 350

Query: 619 --LDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
             +   DA V+V  +L N+YA+ G  +DA+    L   K I          ++N +   F
Sbjct: 351 AVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIV---------MWNAMLTGF 401

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDI 700
            QN+   E  ++++ + +   Q ++ 
Sbjct: 402 VQNELPEEAIRMFQYMMRYTLQTDEF 427


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 198/586 (33%), Positives = 324/586 (55%), Gaps = 46/586 (7%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L++ Y KCG +     V  ++P+  I + N ++A Y +N    +A   + ++    + P+
Sbjct: 117 LIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPD 176

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVF 276
            +T+S++      L  + EG++ H Q++ L   +S   V +AL+ MY K G M DA  V 
Sbjct: 177 EFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVS 236

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +V ++V+ +TA+I G+  HG+  + L++   M + GI+ NEYT +  L  C +L +  
Sbjct: 237 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 296

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G + H  ++K G+                                  S+V+W + I G 
Sbjct: 297 SGRLIHGLIVKAGLE---------------------------------SAVTWTSVIVGL 323

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N + E A+  F QM+R+    + FT SS+L+ACS L  L   +QIH+ ++K   + + 
Sbjct: 324 VQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDK 383

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           +VG++LI+ Y KCGS E A  VF+ L   DVVS NSMI +Y+QNG   +A+ LF  M   
Sbjct: 384 YVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDT 443

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+ P N T+L VLSAC+++GL+++G  +F S      I   + HY+CMVDLLGRAG+L+ 
Sbjct: 444 GLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKE 503

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A + I+ + I     IWR L +ACR H D++MA+ +  ++++L P+D   +V LSN+YA 
Sbjct: 504 AEMLINQVNISDVV-IWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYAS 562

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
            G  +   E +  M+   + K P  SW++V  +I+ F + + SH     + EKL++L+++
Sbjct: 563 TGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEK 622

Query: 697 IEDIGHT----------DNEKEDRVL-YHSERLAVGFGLISLPAKN 731
           ++++G+           D EK+ R L YHSE+LAV F L     KN
Sbjct: 623 VKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKN 668



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 181/359 (50%), Gaps = 39/359 (10%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS+++  C  + +I +  ++ +  +K  +    ++ N L+  Y+KCG +  A  VF+ + 
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVP 138

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R++++W ++I  + ++G  ++ + +   M  DGI P+E+TF+    + + L   H G  
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198

Query: 341 FHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFFR 398
            H Q +  G+ + + FVG+A+VDMY+  G++ +A+    + +GK    V + A I G+  
Sbjct: 199 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDV--VLFTALIVGYSH 256

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           + +  E+++ F  M +     +E+T SS+L  C  L  L +   IH  IVK+  ES    
Sbjct: 257 HGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES---- 312

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
                                        V+W S+I    QNGR   A++ F +M+   I
Sbjct: 313 ----------------------------AVTWTSVIVGLVQNGREEIALLKFRQMLRSSI 344

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            P + T  +VL ACS   +++ G+++  ++V ++G+  ++   + ++D  G+ G  EIA
Sbjct: 345 TPNSFTLSSVLRACSSLAMLEQGKQI-HAIVMKFGLDIDKYVGAALIDFYGKCGSTEIA 402



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 193/469 (41%), Gaps = 57/469 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F++ P R  ++ + +I +   N    G S+          PDG + D  + +    
Sbjct: 130 ARKVFDEVPHRHIVAWNSMIASYIRN----GRSKEAIDIYQRMVPDGILPDEFTFSSVFK 185

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCG 166
            +S   L+ +                  G+R H       V   + FV ++LV+MYAK G
Sbjct: 186 AFSDLGLVHE------------------GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG 227

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            ++    V  Q+   D+     L+ GY+ +    ++   F  +    ++ N YT S++L 
Sbjct: 228 KMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLV 287

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            CG+L  +  G+ +H                    + +K G+              + ++
Sbjct: 288 CCGNLEDLTSGRLIHG-------------------LIVKAGL-------------ESAVT 315

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WT++I G  Q+G  E  L     M    I PN +T +  L +C+SL     G   HA V+
Sbjct: 316 WTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVM 375

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G+ +  +VG A++D Y   G    A+     +      VS N+ I  + +N    EA+
Sbjct: 376 KFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL-LEVDVVSVNSMIYSYAQNGFGHEAL 434

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEA 465
           + FS M       +  T+  +L AC+    L   C    S       E      + +++ 
Sbjct: 435 QLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDL 494

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
             + G  ++AE + +Q+  +DVV W +++ A   +G    A  +  +++
Sbjct: 495 LGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 543



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 6/176 (3%)

Query: 405 AIEAFSQMVRNDAACDEFT--YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           A ++F     N A+  E    YSS+++ C  + S+    +I S  +K  F  ++  G+ L
Sbjct: 60  AAKSFFATAHNGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL--GNKL 117

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           I+AY KCGS   A +VF ++    +V+WNSMI +Y +NGR+++AI ++++MV +GI P  
Sbjct: 118 IDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDE 177

Query: 523 STFLAVLSACSHSGLVQDGQKVF-ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            TF +V  A S  GLV +GQ+   +S+V   G+       S +VD+  + GK+  A
Sbjct: 178 FTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV-SNVFVGSALVDMYAKFGKMRDA 232



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 5/197 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    LE G++ HA++ K  +  D++V A+L++ Y KCG  +   +V   +  +D
Sbjct: 354 VLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD 413

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++  YA+N    +A   F  +    ++PN+ T+  +L+ C +   ++EG  + +
Sbjct: 414 VVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFS 473

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
                  +  T    A ++ +  + G +++AE +   +   +V+ W  +++  + HGD E
Sbjct: 474 SARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVE 533

Query: 302 KPL----RLVCLMREDG 314
                  R++ L  EDG
Sbjct: 534 MAKRVMNRVIDLAPEDG 550


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 195/603 (32%), Positives = 332/603 (55%), Gaps = 14/603 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           ++F+   L+++Y KC      +AV   +   ++ S   +LA +A+N  FD+ + FF  + 
Sbjct: 9   NRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGML 68

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              + P     S  L+ C     I  G+ +    +      ++ V  AL+++Y K G   
Sbjct: 69  LQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCT 128

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA SVF  +  R+V++W+A++  + ++G   + L L   M  DG+ PN+ T    L +CA
Sbjct: 129 DAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACA 188

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           SL +   G + H +V  +G+  G  VGTA+V++Y   G I  A +   ++ +  + V+W+
Sbjct: 189 SLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEK-NVVAWS 247

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI--V 448
           A  A + RN +  +AI    +M     A +  T+ S+L AC+ + +L    +IH RI  +
Sbjct: 248 AISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVL 307

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
               ES+V+V ++L+  Y+KCG+   A  +F ++   D+V WNS+I   +Q+G+  KA+ 
Sbjct: 308 GGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALE 367

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LFE+M +EG++PT  TF +VL ACSH+G++  G+K F S + ++GI PE  H+ CMVDLL
Sbjct: 368 LFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLL 427

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG +  +   + ++P +P    W     ACR + ++  A + ++ + +LDP   A YV
Sbjct: 428 GRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYV 487

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            LSNMYA+AG  +D    R+ M++    KE G SWIEV ++++ F S +  H  + +++ 
Sbjct: 488 LLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHA 547

Query: 689 KLKQLMQQIEDIGHT-DNE----------KEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
           +L++L + ++  G+  D E          KE  V YHSE+LA+ F L++ P  +     +
Sbjct: 548 ELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVK 607

Query: 738 TLE 740
            L 
Sbjct: 608 NLR 610



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 175/333 (52%), Gaps = 2/333 (0%)

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           +L ++    + N L+ +Y KC   +DA +VF G+  +NV SWT ++  F ++ D+++   
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
               M   GI+P E   ++ L++C   R   +G      ++  G+     V TA+V +Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            LG   +A      M      V+W+A +A + RN    EA+  F QM  +  A ++ T  
Sbjct: 123 KLGHCTDAASVFLRMSHR-DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLV 181

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S L AC+ L  L +   +H R+     +S V VG++L+  Y KCG  E A   F Q+   
Sbjct: 182 SGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEK 241

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +VV+W+++  AY++N R R AI +  +M +EG+ P ++TF++VL AC+    ++ G+++ 
Sbjct: 242 NVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIH 301

Query: 546 ESMVKEYGILPEEAH-YSCMVDLLGRAGKLEIA 577
           E +    G L  + +  + +V++  + G L +A
Sbjct: 302 ERIHVLGGGLESDVYVLTALVNMYSKCGNLALA 334



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 3/311 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+    + +GR     I  T +  +  V  +LV++Y K G      +V  +M + D+
Sbjct: 83  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDV 142

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + + ++A YA+N    +A   F ++D   V PN  T  + L  C SL  +  G  +H +
Sbjct: 143 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 202

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
                  S   V  AL+ +Y KCG +E A   F  +V++NV++W+AI   + ++      
Sbjct: 203 VEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDA 262

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ--VIKRGMALGDFVGTAIV 361
           +R++  M  +G+ PN  TF   L +CA++     G   H +  V+  G+    +V TA+V
Sbjct: 263 IRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALV 322

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G +  A     ++      V WN+ IA   ++ +TE+A+E F +M         
Sbjct: 323 NMYSKCGNLALAGNMFDKIAH-LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTI 381

Query: 422 FTYSSILKACS 432
            T++S+L ACS
Sbjct: 382 ITFTSVLFACS 392



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 25/315 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K  ++  L  C+    L  G   H  +    +     V  +LVN+Y KCG I++     
Sbjct: 176 NKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAF 235

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            Q+   ++ + + + A YA+N     A     ++D   + PN  T+ ++L  C +++A+ 
Sbjct: 236 GQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALK 295

Query: 236 EGKQLHAQTMKL--QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +G+++H +   L     S   V  AL+ MY KCG +  A ++F+ +   +++ W ++I  
Sbjct: 296 QGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIAT 355

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA-L 352
             QHG  EK L L   MR +G+ P   TFT  L +C+           HA ++ +G    
Sbjct: 356 NAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACS-----------HAGMLDQGRKHF 404

Query: 353 GDFVGT-----------AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
             F+G             +VD+    G I +++  L  M      V+W A +      + 
Sbjct: 405 VSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRN 464

Query: 402 TEEAIEAFSQMVRND 416
            + AI A   + + D
Sbjct: 465 MDGAIWAAENLFQLD 479


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 204/634 (32%), Positives = 344/634 (54%), Gaps = 19/634 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQM 178
           + VL  C+    L  GR  HA + K   CG +F     +L+ MYA+CG + S + V +++
Sbjct: 269 VGVLQVCAELAQLNHGRELHAALLK---CGTEFNIQCNALLVMYARCGWVDSALRVFREI 325

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D  S N +L+ Y +N L+ +A  FF ++      P+H    ++L+  G L  +  G+
Sbjct: 326 GDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGR 385

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++HA  +K +  S   ++N L+ MYIKC  +E +  VF+ +  ++ +SWT II  + Q  
Sbjct: 386 EVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSS 445

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            Y + +      +++GI  +       L +C+ L++  +    H+  I+ G+ L   +  
Sbjct: 446 RYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKN 504

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            I+D+Y   GE+  A   + EM      V+W + +  F  N    EA+  F +M+     
Sbjct: 505 RIIDIYGECGEVCYAL-NIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D      IL A + L SL   ++IH  +++ KF     V SSL++ Y+ CGS   A +V
Sbjct: 564 PDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKV 623

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F +    DVV W +MI A   +G  ++AI +F++M+  G+ P + +FLA+L ACSHS LV
Sbjct: 624 FDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLV 683

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G+   + MV +Y + P + HY+C+VDLLGR+G+ E A  FI ++P++P + +W  L  
Sbjct: 684 DEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLG 743

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H + ++A   + ++LEL+PD+   YV +SN++AE G   + +E R  M  + + K+
Sbjct: 744 ACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKD 803

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSE-------MPKVYEKLKQLMQQIEDIGH-----TDNE 706
           P CSWIE+ N ++ F +++ SH +       + ++ EKL++  Q +ED        ++ E
Sbjct: 804 PACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEE 863

Query: 707 KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           K D +  HSERLA+ FGLIS  +      ++ L 
Sbjct: 864 KIDLLHRHSERLAISFGLISTASGTPLRIAKNLR 897



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 267/588 (45%), Gaps = 30/588 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP-DGFIDDGCSNTVPV 106
           A +LF+  P R   S + LI    ++    G +   Y     S P  G   DGC+     
Sbjct: 112 AHRLFDGMPARTVFSWNALI-GACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCT----- 165

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                        +  VL  C  E     G   H L  K+ +     V  +LV MYAKCG
Sbjct: 166 -------------LASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCG 212

Query: 167 DIKSMVAVVKQM-PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
            + S + V + M    D+AS N  ++G  +N +F +A   F ++       N YT   +L
Sbjct: 213 LLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVL 272

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
            +C  L+ ++ G++LHA  +K          NALL MY +CG ++ A  VF  +  ++ I
Sbjct: 273 QVCAELAQLNHGRELHAALLKCG-TEFNIQCNALLVMYARCGWVDSALRVFREIGDKDYI 331

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW ++++ + Q+  Y + +     M ++G +P+       L++   L     G   HA  
Sbjct: 332 SWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           +K+ +     +   ++DMY     + E   ++ +  +    VSW   IA + ++ +  EA
Sbjct: 392 VKQRLDSDLQIANTLMDMYIKCYSV-ECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEA 450

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           I  F    +     D     SIL+ACS L S++  +Q+HS  +++    ++ + + +I+ 
Sbjct: 451 IGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDI 509

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y +CG    A  +F  L   D+V+W SM+  +++NG   +A+ LF KM+  GI+P +   
Sbjct: 510 YGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVAL 569

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILP-EEAHYSCMVDLLGRAGKLEIALIFISNL 584
           + +L A +    +  G+++   +++  G  P E A  S +VD+    G +  AL      
Sbjct: 570 VGILGAIAGLSSLTKGKEIHGFLIR--GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEA 627

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTL 630
             K    +W  +  A   H   K A +I K++LE  + PD  +    L
Sbjct: 628 KCKDVV-LWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 204/419 (48%), Gaps = 10/419 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQ---FVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VL   +    +  GR+ HA    T   GD    F+   L+ MY KCG +     +   MP
Sbjct: 61  VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP 120

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID----VQPNHYTYSTMLAICGSLSAID 235
              + S N L+     +    +A   +  +   +      P+  T +++L  CG+     
Sbjct: 121 ARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGF 294
            G ++H   +K      T V+NAL+ MY KCG+++ A  VFE +   R+V SW + I+G 
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+G + + L L   M+ DG   N YT    L  CA L   + G   HA ++K G    +
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEF-N 299

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
               A++ MY+  G +  A +  +E+G     +SWN+ ++ + +N+   EAI+ F +MV+
Sbjct: 300 IQCNALLVMYARCGWVDSALRVFREIGDK-DYISWNSMLSCYVQNRLYAEAIDFFGEMVQ 358

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           N    D     S+L A   L  L    ++H+  VK + +S++ + ++L++ Y KC S E 
Sbjct: 359 NGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVEC 418

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           + RVF ++   D VSW ++I  Y+Q+ R  +AI  F     EGI+       ++L ACS
Sbjct: 419 SARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 10/342 (2%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA---VSNALLTMYIKCGMMEDAE 273
           +HY +  +L +     A+ EG+QLHA  +    L       ++  LL MY KCG + DA 
Sbjct: 56  DHYGW--VLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAH 113

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED----GIDPNEYTFTVALASC 329
            +F+G+  R V SW A+I      G   + + +   MR      G  P+  T    L +C
Sbjct: 114 RLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKAC 173

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            +  +   G   H   +K G+     V  A+V MY+  G +  A +  + M       SW
Sbjct: 174 GAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASW 233

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N+ I+G  +N    EA++ F +M  +  + + +T   +L+ C+ L  L    ++H+ ++K
Sbjct: 234 NSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLK 293

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              E N+   ++L+  Y +CG  + A RVF ++   D +SWNSM+  Y QN    +AI  
Sbjct: 294 CGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDF 352

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           F +MV  G  P ++  +++LSA  H G + +G++V    VK+
Sbjct: 353 FGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQ 394



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 6/319 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ +LS       L  GR  HA   K  +  D  +  +L++MY KC  ++    V 
Sbjct: 364 DHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVF 423

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSA 233
            +M   D  S   ++A YA+++ + +A   F   + +GI V P      ++L  C  L +
Sbjct: 424 DRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP--MMMGSILEACSGLKS 481

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I   KQ+H+  ++   L    + N ++ +Y +CG +  A ++FE L ++++++WT+++N 
Sbjct: 482 ISLLKQVHSYAIR-NGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNC 540

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F ++G   + + L   M   GI P+       L + A L +   G   H  +I+    + 
Sbjct: 541 FAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVE 600

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V +++VDMYSG G +  A K   E  K    V W A I     +   ++AI  F +M+
Sbjct: 601 GAVVSSLVDMYSGCGSMNYALKVFDE-AKCKDVVLWTAMINATGMHGHGKQAIYIFKRML 659

Query: 414 RNDAACDEFTYSSILKACS 432
               + D  ++ ++L ACS
Sbjct: 660 ETGVSPDHVSFLALLYACS 678


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 326/596 (54%), Gaps = 9/596 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + VL  C+  +   LGR+   +  K  +    FV  + ++M++K G I     + 
Sbjct: 300 DEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLF 359

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSA 233
             + Y D  S N LL G   N   ++A      + LDG  V P+  +++T++  C ++ A
Sbjct: 360 NLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDG--VTPDEVSFATVINACSNIRA 417

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            + GKQ+H   MK    S  AV ++L+  Y K G +E    V   +   +++    +I G
Sbjct: 418 TETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAG 477

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+   ++ + L   +  DG+ P+ +TF+  L+ C  L +S +G   H   +K G    
Sbjct: 478 LVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLND 537

Query: 354 DF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
           D  VG ++V  Y       +A K L EM    + V W A ++G+ +N  + +++ +F +M
Sbjct: 538 DTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRM 597

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
              D   DE T++SILKACS + +L+  ++IH  I+KS F S     S++I+ Y+KCG  
Sbjct: 598 RSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDI 657

Query: 473 EDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             +   F +L +  D+  WNSMI  +++NG A +A++LF+KM    I+    TFL VL A
Sbjct: 658 ISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIA 717

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C+H+GL+ +G+  F+SM K YGI+P   HY+C +DLLGR G L+ A   I+ LP +P   
Sbjct: 718 CAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGV 777

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IW    AACR H D +  E  +K+++EL+P +++ YV LSNMYA AG   +A+  R+ M+
Sbjct: 778 IWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMR 837

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE---KLKQLMQQIEDIGHTD 704
            K  +K PGCSWI V NK   F  Q+K+H    ++YE    L ++M + +D+ + D
Sbjct: 838 EKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMMHKYDDVENYD 893



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 241/464 (51%), Gaps = 4/464 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ HA   +  +  + FV +SL+N+YAKCG I   + V       ++   N +L G  +
Sbjct: 219 GRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVR 278

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N    +A   FL +  + ++ + +TY ++L  C  L +   G+Q+   T+K    +   V
Sbjct: 279 NEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFV 338

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +NA L M+ K G ++DA+++F  +  ++ +SW A++ G   + + E+ + ++  M  DG+
Sbjct: 339 ANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGV 398

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E +F   + +C+++R +  G   H   +K  +     VG++++D YS  G++   +K
Sbjct: 399 TPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRK 458

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
            L ++  S S V  N  IAG  +N + +EAI+ F Q++R+      FT+SSIL  C+ L 
Sbjct: 459 VLAQVDAS-SIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLL 517

Query: 436 SLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSM 493
           S    +Q+H   +KS F   +  VG SL+  Y K    EDA ++  ++    ++V W ++
Sbjct: 518 SSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAI 577

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +  Y+QNG + ++++ F +M    + P   TF ++L ACS    + DG+++   ++K  G
Sbjct: 578 VSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKS-G 636

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
               +   S ++D+  + G +  +      L  K    +W  + 
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 224/430 (52%), Gaps = 21/430 (4%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPY-LDIASCNCLLAGYAKNALFD-QAFSFFLK 208
           D+    ++V      G ++    ++ +MP      + N +++GYA+ +  + + F  +  
Sbjct: 131 DRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKD 190

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    + P   T+++ML+   + +A  EG+Q+HA  ++    +   V ++L+ +Y KCG 
Sbjct: 191 MRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGC 250

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + DA  VF+   ++NV+ W A++NG  ++    + +++   M+  G++ +E+T+   L +
Sbjct: 251 IGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGA 310

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA L +  +G       IK  M    FV  A +DM+S  G I +AK  L  +     +VS
Sbjct: 311 CAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKT-LFNLITYKDTVS 369

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA + G   N++ EEAI     M  +    DE ++++++ ACS + +  T +QIH   +
Sbjct: 370 WNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAM 429

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K    SN  VGSSLI+ Y+K G  E   +V +Q+ A+ +V  N +I    QN R  +AI 
Sbjct: 430 KHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAID 489

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACS----------------HSGLVQDGQKVFESMVKEY 552
           LF++++ +G++P++ TF ++LS C+                 SG + D   V  S+V  Y
Sbjct: 490 LFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTY 549

Query: 553 --GILPEEAH 560
               +PE+A+
Sbjct: 550 LKARMPEDAN 559



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 217/454 (47%), Gaps = 39/454 (8%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS CSR   L  G++ H    K  +    F  A+LVNMYA+CG +     V   +   D 
Sbjct: 38  LSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDT 97

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
                +++GY +   F +A   F +++ +   P+     T +A+  +L+A+         
Sbjct: 98  VCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRV---TCVAVVCALTAL--------- 145

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYEK 302
                                  G +EDA ++   +    + ++W A+I+G+ Q    E 
Sbjct: 146 -----------------------GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEH 182

Query: 303 PL-RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            +  L   MR  G+ P   TF   L++ A+      G   HA  ++ G+    FVG++++
Sbjct: 183 EVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLI 242

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           ++Y+  G I +A       G+  + V WNA + G  RN+   EAI+ F  M R     DE
Sbjct: 243 NLYAKCGCIGDAILVFDCSGEK-NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADE 301

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FTY S+L AC+ L S     Q+    +K+  ++++ V ++ ++ ++K G+ +DA+ +F+ 
Sbjct: 302 FTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNL 361

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +T  D VSWN+++   + N    +AI + + M ++G+ P   +F  V++ACS+    + G
Sbjct: 362 ITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETG 421

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +++   +  ++ I    A  S ++D   + G +E
Sbjct: 422 KQI-HCLAMKHSICSNHAVGSSLIDFYSKHGDVE 454



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 44/329 (13%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G  V+P+ +  +  L+ C  L A+  GKQ H    K    S    + AL+ MY +CG + 
Sbjct: 24  GGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVG 83

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF G+   + + W ++I+G+ + G +++ + L   M + G  P+  T       C 
Sbjct: 84  DARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT-------C- 135

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                       A+V   + LG + +A+  L  M   +S+V+WN
Sbjct: 136 ---------------------------VAVVCALTALGRLEDARTLLHRMPAPSSTVAWN 168

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAAC-----DEFTYSSILKACSLLPSLATCEQIHS 445
           A I+G+ +    E   E F   +  D  C        T++S+L A +   +     Q+H+
Sbjct: 169 AVISGYAQQSGIEH--EVFG--LYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHA 224

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
             V+   ++NV VGSSLI  Y KCG   DA  VF      +VV WN+M+    +N    +
Sbjct: 225 AAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVE 284

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           AI +F  M   G+     T+++VL AC+H
Sbjct: 285 AIQMFLYMKRLGLEADEFTYVSVLGACAH 313



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 67/129 (51%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D+F  ++ L ACS L +L + +Q H    K    S     ++L+  Y +CG   DA RVF
Sbjct: 30  DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVF 89

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             ++  D V W SMI  Y + GR ++A+ LF +M   G  P   T +AV+ A +  G ++
Sbjct: 90  GGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLE 149

Query: 540 DGQKVFESM 548
           D + +   M
Sbjct: 150 DARTLLHRM 158


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 208/632 (32%), Positives = 338/632 (53%), Gaps = 16/632 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L  C     ++ G   HA + K++   + FV  +L+ MYA+ G +     +   M  
Sbjct: 322 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 381

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +L+G+ +N L+ +A  F+ ++     +P+     +++A          G Q+
Sbjct: 382 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQI 441

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  MK    S   V N+L+ MY K   M+  + +F+ +  ++V+SWT II G  Q+G +
Sbjct: 442 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSH 501

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTA 359
            + L L   ++ +GID +    +  L +C+ L+        H+ +I++G  L D V    
Sbjct: 502 SRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQNG 559

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           IVD+Y   G +  A +   E+ +    VSW + I+ +  N    EA+E F  M       
Sbjct: 560 IVDVYGECGNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 618

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  +  SIL A + L +L   ++IH  +++  F     + S+L++ Y +CG+ E +  VF
Sbjct: 619 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 678

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + +   D+V W SMI AY  +G  R AI LF +M  E I P +  F+AVL ACSHSGL+ 
Sbjct: 679 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 738

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G++  ESM  EY + P   HY C+VDLLGRA  LE A  F+  + ++PTA +W  L  A
Sbjct: 739 EGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 798

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ HS+ ++ E  ++++LE+DP++   YV +SN+YA      D EE R  MK   + K P
Sbjct: 799 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNP 858

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKED 709
           GCSWIEV NK++ F +++KSH +  ++Y KL Q+ +++   G          H   E+E 
Sbjct: 859 GCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 918

Query: 710 -RVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
            ++LY HSERLA+ +G+++ P       ++ L
Sbjct: 919 VQMLYGHSERLAIAYGMLTTPEGASLRITKNL 950



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 267/552 (48%), Gaps = 20/552 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           +L  C   +    G   H L  K       FV  S+V MY KC D+     +  +MP   
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 281

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N +++ Y+ N    +A   F ++    + PN YT+   L  C   S I +G  +H
Sbjct: 282 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K  Y     V+NAL+ MY + G M +A ++F  +   + ISW ++++GF Q+G Y 
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 401

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L+    MR+ G  P+       +A+ A   N+  G   HA  +K G+     VG ++V
Sbjct: 402 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLV 461

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+    +        +M      VSW   IAG  +N     A+E F ++       D 
Sbjct: 462 DMYAKFCSMKYMDCIFDKM-PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 520

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
              SSIL ACS L  +++ ++IHS I++    S++ + + +++ Y +CG+ + A R+F  
Sbjct: 521 MMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFEL 579

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVVSW SMI  Y  NG A +A+ LF  M   G+ P + + +++LSA +    ++ G
Sbjct: 580 IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 639

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA---LIFISNLPIKPTAPIWRPLFA 598
           +++   ++++ G + E +  S +VD+  R G LE +     FI N  +     +W  +  
Sbjct: 640 KEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMIN 694

Query: 599 ACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EI 655
           A   H   + A  + +++ +  + PD  A +V +    + +GL    E +R L  MK E 
Sbjct: 695 AYGMHGCGRAAIDLFRRMEDESIAPDHIA-FVAVLYACSHSGLM--NEGRRFLESMKYEY 751

Query: 656 SKEPGCSWIEVY 667
             EP   W E Y
Sbjct: 752 QLEP---WPEHY 760



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 241/486 (49%), Gaps = 7/486 (1%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  C  ++ L  G++ HA +IT  A+    F++  LV MY KCG +     +   MP+ 
Sbjct: 120 VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 179

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            I + N ++  Y  N     +   + ++    +  +  T+  +L  CG L     G ++H
Sbjct: 180 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVH 239

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGDY 300
              +K  Y+S   V+N+++ MY KC  +  A  +F+ + ++ +V+SW ++I+ +  +G  
Sbjct: 240 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 299

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LRL   M++  + PN YTF  AL +C        G   HA V+K    +  FV  A+
Sbjct: 300 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 359

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G++ EA      M     ++SWN+ ++GF +N    EA++ + +M       D
Sbjct: 360 IAMYARFGKMGEAANIFYNM-DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 418

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                SI+ A +   +     QIH+  +K+  +S++ VG+SL++ Y K  S +  + +F 
Sbjct: 419 LVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   DVVSW ++I  ++QNG   +A+ LF ++ +EGI        ++L ACS   L+  
Sbjct: 479 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 538

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            +++   ++++   L +    + +VD+ G  G ++ A      +  K     W  +  +C
Sbjct: 539 VKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI-SC 594

Query: 601 RCHSDL 606
             H+ L
Sbjct: 595 YVHNGL 600



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 171/326 (52%), Gaps = 1/326 (0%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEG 278
            YS++L +CGS  A+ EG+Q+HA  +    L  +  +S  L+ MY KCG + DAE +F+G
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  + + +W A+I  +  +G+    L L   MR  GI  +  TF   L +C  L++   G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H   IK G     FV  +IV MY+   ++  A++    M +    VSWN+ I+ +  
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N ++ EA+  F +M +   A + +T+ + L+AC     +     IH+ ++KS +  NV V
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            ++LI  Y + G   +A  +F  +   D +SWNSM+  + QNG   +A+  + +M   G 
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 415

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKV 544
           +P     +++++A + SG   +G ++
Sbjct: 416 KPDLVAVISIIAASARSGNTLNGMQI 441



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 6/315 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI +++  +R      G + HA   K  +  D  V  SLV+MYAK   +K M  +  +MP
Sbjct: 422 VISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             D+ S   ++AG+A+N    +A   F  ++L+GID+  +    S++L  C  L  I   
Sbjct: 482 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL--DVMMISSILLACSGLKLISSV 539

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K++H+  ++ + LS   + N ++ +Y +CG ++ A  +FE +  ++V+SWT++I+ +  +
Sbjct: 540 KEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 598

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + L L  LM+E G++P+  +    L++ ASL     G   H  +I++G  L   + 
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 658

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           + +VDMY+  G + E  + +    ++   V W + I  +  +     AI+ F +M     
Sbjct: 659 STLVDMYARCGTL-EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 717

Query: 418 ACDEFTYSSILKACS 432
           A D   + ++L ACS
Sbjct: 718 APDHIAFVAVLYACS 732


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 181/594 (30%), Positives = 329/594 (55%), Gaps = 12/594 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           ++++Y     +   + V K +    + +   ++  +   +LF +A + F+++      P+
Sbjct: 45  VISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPD 104

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H  + ++L  C  +  +  G+ +H   ++L         NAL+ MY K   ++    VFE
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFE 164

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            + +++V+S+  +I G+ Q G YE  LR+V  M    + P+ +T +  L   +   +   
Sbjct: 165 LMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK 224

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H  VI++G+    ++G+++VDMY+    I ++++    + +   S+SWN+ +AG+ 
Sbjct: 225 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRR-DSISWNSLVAGYV 283

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N +  EA+  F QMV          +SS++ AC+ L +L   +Q+H  +++  F  N+ 
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + S+L++ Y+KCG+ + A ++F ++   D VSW ++I  ++ +G   +A+ LFE+M  +G
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 403

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++P    F+AVL+ACSH GLV +    F SM K YG+  E  HY+ + DLLGRAGKLE A
Sbjct: 404 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 463

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
             FIS + ++PT  +W  L ++C  H +L++AE ++++I  +D ++   YV + NMYA  
Sbjct: 464 YDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASN 523

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   +  + R  ++ K + K+P CSWIE+ NK + F S ++SH  M ++ E LK +M+Q+
Sbjct: 524 GRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQM 583

Query: 698 EDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           E  G+           D E +  +L+ HSERLAV FG+I+         ++ + 
Sbjct: 584 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 637



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 245/555 (44%), Gaps = 63/555 (11%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D      VL  C+    L  G   H  I +  +  D +   +L+NMY+K   I S+  V 
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF 163

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + MP  D+ S N ++AGYA++ +++ A     ++   D++P+ +T S++L I      + 
Sbjct: 164 ELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVL 223

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++H   ++    S   + ++L+ MY K   +ED+E VF  L +R+ ISW +++ G+ 
Sbjct: 224 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYV 283

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G Y + LRL   M    + P    F+  + +CA L   H+G   H  V++ G     F
Sbjct: 284 QNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIF 343

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A+VDMYS  G I  A+K    M      VSW A I G   +    EA+  F +M R 
Sbjct: 344 IASALVDMYSKCGNIQAARKIFDRMNLH-DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 402

Query: 416 DAACDEFTYSSILKACS---------------------------------LLPSLATCEQ 442
               ++  + ++L ACS                                 LL      E+
Sbjct: 403 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 462

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD---VVSWNSMIKAYSQ 499
            +  I K + E    V S+L+ + +   + E AE+V  ++   D   + ++  M   Y+ 
Sbjct: 463 AYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYAS 522

Query: 500 NGRARKAIILFEKMVVEGIRP---------TNSTFLAVLSACSHSGLVQDGQ---KVFES 547
           NGR ++   L  ++  +G+R           N T   V    SH  + +  +    V E 
Sbjct: 523 NGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQ 582

Query: 548 MVKE------YGILP--EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           M KE       G+L   +E H   +  L G + +L +A   I+  P   T  + + +   
Sbjct: 583 MEKEGYVADTSGVLHDVDEEHKREL--LFGHSERLAVAFGIINTEP-GTTIRVTKNIRIC 639

Query: 600 CRCHSDLKMAEFISK 614
             CH  +K   FISK
Sbjct: 640 TDCHVAIK---FISK 651



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 179/342 (52%), Gaps = 3/342 (0%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           + KQLHAQ ++ Q LS T+ S  ++++Y    ++ +A  VF+ L    V++W ++I  F 
Sbjct: 23  QAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFT 81

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
               + + L     MR  G  P+   F   L SC  + +   G   H  +++ GM    +
Sbjct: 82  DQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A+++MYS L  I   +K  + M +    VS+N  IAG+ ++   E+A+    +M  +
Sbjct: 142 TGNALMNMYSKLLGIDSVRKVFELMPRK-DVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           D   D FT SS+L   S    +   ++IH  +++   +S+V++GSSL++ Y K    ED+
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ERVFS L   D +SWNS++  Y QNGR  +A+ LF +MV   +RP    F +V+ AC+H 
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             +  G+++    V   G        S +VD+  + G ++ A
Sbjct: 321 ATLHLGKQL-HGYVLRGGFGRNIFIASALVDMYSKCGNIQAA 361


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 318/570 (55%), Gaps = 3/570 (0%)

Query: 140 HALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HAL  K  +   + +V  SL+NMY K G +     V   MP  +  S + ++AGYA    
Sbjct: 34  HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93

Query: 199 FDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
            ++AF  F L L+    + + +  + +L+       +  G+Q+H   +K   L   +V N
Sbjct: 94  SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+TMY K G M  A  VFE   +RN I+W+A+I G+ Q+G+ +  + +   M   G  P
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 213

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            E+TF   L + + L    +G   H  ++K G  +  +V +A+VDMY+  G I +AK+  
Sbjct: 214 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 273

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++      V W A ++G  +N + EEA+  +++M +      + T +S L+AC+ + +L
Sbjct: 274 DQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 332

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q+H++IVK        VGS+L   Y+KCG+ ED   VF ++   DV++WNS+I  +
Sbjct: 333 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 392

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           SQNG    A+ LFE+M +EG  P N TF+ +L ACSH GLV  G + F  M K+YG+ P 
Sbjct: 393 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPR 452

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CMVD+L RAG L+ A  FI ++ I     +WR +  ACR   D  +  +  ++++
Sbjct: 453 LDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLM 512

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL   D++ Y+ LSN+YA      D E  R LM+++ ++K+PGCSW+E+ ++++ F    
Sbjct: 513 ELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGE 572

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           + H E   +  +L++L + ++D G+  + K
Sbjct: 573 QQHPEAENINAQLRRLAKHMKDEGYHSSSK 602



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  S    L +G + H LI K  +     V  SLV MYAK G + +   V +     +
Sbjct: 120 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 179

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + + ++ GYA+N   D A S F ++      P  +T+  +L     L A+  GKQ H 
Sbjct: 180 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 239

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL +  +  V +AL+ MY KCG + DA+  F+ L + +++ WTA+++G  Q+G++E+
Sbjct: 240 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 299

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M ++GI P++ T    L +CA +     G   H Q++K G+ LG  VG+A+  
Sbjct: 300 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 359

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +     + +      ++WN+ I+GF +N     A++ F +M       D  
Sbjct: 360 MYSKCGNLEDGMSVFRRI-PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNI 418

Query: 423 TYSSILKACS 432
           T+ +IL ACS
Sbjct: 419 TFINILCACS 428



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+  S    L +G++ H L+ K       +V ++LV+MYAKCG I        Q+  
Sbjct: 219 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 278

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           +DI     +++G+ +N   ++A + + ++D   + P+  T ++ L  C  ++A++ GKQL
Sbjct: 279 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 338

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q +K        V +AL TMY KCG +ED  SVF  +  R+VI+W +II+GF Q+G  
Sbjct: 339 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 398

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-----MALGDF 355
              L L   M+ +G  P+  TF   L +C     SHMG      ++ RG     +   D+
Sbjct: 399 NGALDLFEEMKMEGTIPDNITFINILCAC-----SHMG------LVDRGWEYFSLMTKDY 447

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKE 379
             T  +D Y+ + +I      LKE
Sbjct: 448 GLTPRLDHYACMVDILSRAGMLKE 471



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K  +   L  C+    LE G++ H  I K  +     V ++L  MY+KCG+++  ++V +
Sbjct: 316 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 375

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P  D+ + N +++G+++N   + A   F ++      P++ T+  +L  C  +  +D 
Sbjct: 376 RIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDR 435

Query: 237 GKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
           G +  +   K   L+      A ++ +  + GM+++A+   E + +      W  ++   
Sbjct: 436 GWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 495

Query: 295 KQHGDYE 301
           +   D++
Sbjct: 496 RSLRDFD 502


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 194/581 (33%), Positives = 327/581 (56%), Gaps = 1/581 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+ E  L  G + H L  K  +  +  V  +LV+MYAKC  ++    +   MP  D+
Sbjct: 255 LSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL 314

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++G  +N L D A   F  +    +QP+  T +++L     L+   +GK++H  
Sbjct: 315 VTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGY 374

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++        + +AL+ +Y KC  +  A++VF+     +V+  + +I+G+  +   E  
Sbjct: 375 IVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAA 434

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           +++   +   GI PN       L +CAS+    +G   H  V+K       +V +A++DM
Sbjct: 435 VKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDM 494

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS  G +  +     +M  +   V+WN+ I+ F +N + EEA++ F QM+      +  T
Sbjct: 495 YSKCGRLDLSHYMFSKM-SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVT 553

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SSIL AC+ LP++   ++IH  I+K    +++   S+LI+ Y KCG+ E A RVF  + 
Sbjct: 554 ISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMP 613

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + VSWNS+I AY  +G  ++++ L   M  EG +  + TFLA++SAC+H+G VQ+G +
Sbjct: 614 EKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLR 673

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F  M +EY I P+  H SCMVDL  RAGKL+ A+ FI+++P KP A IW  L  ACR H
Sbjct: 674 LFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVH 733

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++AE  S+++ +LDP +   YV +SN+ A AG      + R+LMK K++ K PG SW
Sbjct: 734 RNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSW 793

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD 704
           ++V N  + F + +K+H +  ++Y  LK L+ +++  G+ +
Sbjct: 794 VDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEGNGN 834



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 250/492 (50%), Gaps = 3/492 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+  C+    L LGR  H       +  D +V ++L+ MYA  G +     V 
Sbjct: 146 DGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVF 205

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D    N ++ GY K      A   F  +      PN  T +  L++C + + + 
Sbjct: 206 DGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLL 265

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH   +K     + AV+N L++MY KC  +E+A  +F  + + ++++W  +I+G  
Sbjct: 266 SGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCV 325

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  +  LRL C M++ G+ P+  T    L +   L     G   H  +++    +  F
Sbjct: 326 QNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVF 385

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A+VD+Y    ++  A+    +  KS   V  +  I+G+  N+ +E A++ F  ++  
Sbjct: 386 LVSALVDIYFKCRDVRMAQNVF-DATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLAL 444

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +    +S L AC+ + ++   +++H  ++K+ +E   +V S+L++ Y+KCG  + +
Sbjct: 445 GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLS 504

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +FS+++A D V+WNSMI +++QNG   +A+ LF +M++EG++  N T  ++LSAC+  
Sbjct: 505 HYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGL 564

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G+++   ++K   I  +    S ++D+ G+ G LE+AL    ++P K     W  
Sbjct: 565 PAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS-WNS 622

Query: 596 LFAACRCHSDLK 607
           + +A   H  +K
Sbjct: 623 IISAYGAHGLVK 634



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 16/480 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVC-----GDQFVTASLVNMYAKCGDIKSMVAV 174
           ++ +L  C     L LG R HA    + +      G   +   LV MY      +  VAV
Sbjct: 39  LLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAV 98

Query: 175 VKQMPYLDIASC---NCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICG 229
              +P    A+    N L+ G+        A  F++K+       +P+ +T   ++  C 
Sbjct: 99  FSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCA 158

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           +L A+  G+ +H  T  L       V +AL+ MY   G+++ A  VF+G+ +R+ + W  
Sbjct: 159 ALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNV 218

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +++G+ + GD    + L  +MR  G DPN  T    L+ CA+  +   G   H   +K G
Sbjct: 219 MMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG 278

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     V   +V MY+    + EA +    M +    V+WN  I+G  +N   ++A+  F
Sbjct: 279 LEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGCVQNGLVDDALRLF 337

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M ++    D  T +S+L A + L      ++IH  IV++    +V + S+L++ Y KC
Sbjct: 338 CDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKC 397

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
                A+ VF    + DVV  ++MI  Y  N  +  A+ +F  ++  GI+P      + L
Sbjct: 398 RDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTL 457

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIALIFISNLPIK 587
            AC+    ++ GQ++   ++K      E   Y  S ++D+  + G+L+++    S +  K
Sbjct: 458 PACASMAAMRIGQELHGYVLKN---AYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK 514



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 153/310 (49%), Gaps = 23/310 (7%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
            V   L  C+    + +G+  H  + K A  G  +V ++L++MY+KCG +     +  +M
Sbjct: 452 MVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKM 511

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D  + N +++ +A+N   ++A   F ++    V+ N+ T S++L+ C  L AI  GK
Sbjct: 512 SAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGK 571

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H   +K    +     +AL+ MY KCG +E A  VFE + ++N +SW +II+ +  HG
Sbjct: 572 EIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHG 631

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG- 357
             ++ + L+C M+E+G   +  TF   +++CA           HA  ++ G+ L   +  
Sbjct: 632 LVKESVDLLCCMQEEGFKADHVTFLALISACA-----------HAGQVQEGLRLFRCMTE 680

Query: 358 -----------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
                      + +VD+YS  G++ +A + + +M     +  W A +     ++  E A 
Sbjct: 681 EYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAE 740

Query: 407 EAFSQMVRND 416
            A  ++ + D
Sbjct: 741 IASQELFKLD 750


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 207/640 (32%), Positives = 348/640 (54%), Gaps = 22/640 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  C+    L LGR  HA + K+    +    A LV MY KCG + S + V +++  
Sbjct: 270 VGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDE 328

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +L+ Y +N L+ +A  F  ++     QP+H    ++ +  G L  +  GK++
Sbjct: 329 KDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEV 388

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  +K +  S T V N L+ MY+KC  +E +  VF+ +  ++ ISWT II  + Q   +
Sbjct: 389 HAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRH 448

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L +    +++GI  +       L +C+ L    +    H   I+ G+ L   V   I
Sbjct: 449 IEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRI 507

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   GE++ + K   E  +    V+W + I  +  +    EA+  F++M   D   D
Sbjct: 508 IDIYGECGEVYHSLKMF-ETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPD 566

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                SIL A   L SLA  +++H  +++  F     + SSL++ Y+ CGS   A +VF+
Sbjct: 567 SVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFN 626

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D+V W +MI A   +G  ++AI LF++M+  G+ P + +FLA+L ACSHS LV +
Sbjct: 627 AVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNE 686

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+   + M+  Y + P + HY+C+VDLLGR+G+ E A  FI ++P+KP + +W  L  AC
Sbjct: 687 GKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGAC 746

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H + ++A   + ++LEL+PD+   YV +SN++AE G   +A+E R  +  + + K+P 
Sbjct: 747 RVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPA 806

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHTDN-----------EKE 708
           CSWIE+ N ++ F +++ SH +  ++  KL ++ +++ ++ G+T++           EK 
Sbjct: 807 CSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVSEEEKV 866

Query: 709 DRVLYHSERLAVGFGLIS----LP---AKNKFECSRTLEY 741
           D +  HSERLA+ FGLI+    +P   AKN   C    E+
Sbjct: 867 DVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEF 906



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 247/506 (48%), Gaps = 24/506 (4%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYA 194
           G   H L  K  +    FV  +L+ MYAKCG + S + V + M    D+AS N +++G  
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N +F QA   F  +    +  N YT   +L +C  L+ ++ G++LHA  +K    S + 
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLK----SGSE 298

Query: 255 VS---NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
           V+   NALL MY KCG ++ A  VF  + +++ ISW ++++ + Q+G Y + +  +  M 
Sbjct: 299 VNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEML 358

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMF-----HAQVIKRGMALGDFVGTAIVDMYSG 366
             G  P ++   V+L+S       H+G++      HA  IK+ +     VG  ++DMY  
Sbjct: 359 RGGFQP-DHACIVSLSSAV----GHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMK 413

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              I E    + +  +    +SW   I  + ++ +  EA+E F +  +     D     S
Sbjct: 414 CRYI-EYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGS 472

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL+ACS L ++   +Q+H   +++     V V + +I+ Y +CG    + ++F  +   D
Sbjct: 473 ILEACSGLETILLAKQLHCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQKD 531

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +V+W SMI  Y+ +G   +A++LF +M    ++P +   +++L A      +  G++V  
Sbjct: 532 IVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHG 591

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            +++      EEA  S +VD+    G L  AL   + +  K    +W  +  A   H   
Sbjct: 592 FLIRR-NFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMV-LWTAMINATGMHGHG 649

Query: 607 KMAEFISKQILE--LDPDDAAVYVTL 630
           K A  + K++L+  + PD  +    L
Sbjct: 650 KQAIDLFKRMLQTGVTPDHVSFLALL 675



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 197/398 (49%), Gaps = 6/398 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA+ T +    D F+   L+ MY KCG +     +   M    + S N L+  Y  +   
Sbjct: 83  HAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSA 142

Query: 200 DQAFSFF--LKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            +A   +  ++L     V P+  T +++L   G       G ++H   +K      T V+
Sbjct: 143 CEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVA 202

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           NAL+ MY KCG+++ A  VFE +   R+V SW ++I+G  Q+G + + L L   M+   +
Sbjct: 203 NALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVL 262

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             N YT    L  C  L   ++G   HA ++K G  + +    A++ MY+  G +  A +
Sbjct: 263 SMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEV-NIQCNALLVMYTKCGRVDSALR 321

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             +E+ +    +SWN+ ++ + +N    EAIE  S+M+R     D     S+  A   L 
Sbjct: 322 VFREIDEK-DYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   +++H+  +K + +S+  VG++L++ Y KC   E +  VF ++   D +SW ++I 
Sbjct: 381 WLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIIT 440

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            Y+Q+ R  +A+ +F +   EGI+       ++L ACS
Sbjct: 441 CYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACS 478



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 6/341 (1%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAE 273
           P    Y  +L +  +  A+ +G Q+HA  +    L      ++  LL MY KCG + DA 
Sbjct: 56  PPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADAR 115

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCA 330
            +F+G+  R V SW A+I  +   G   + L +   MR     G+ P+  T    L +  
Sbjct: 116 LLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASG 175

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              +   G   H   +K G+    FV  A++ MY+  G +  A +  + M       SWN
Sbjct: 176 VEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWN 235

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + I+G  +N    +A++ F  M R   + + +T   +L+ C+ L  L    ++H+ ++KS
Sbjct: 236 SMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKS 295

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             E N+   ++L+  Y KCG  + A RVF ++   D +SWNSM+  Y QNG   +AI   
Sbjct: 296 GSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFI 354

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +M+  G +P ++  +++ SA  H G + +G++V    +K+
Sbjct: 355 SEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQ 395



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 19/218 (8%)

Query: 103 TVPVTCYSLESLLDKQFV-----------------IEVLSYCSREECLELGRRYHALITK 145
           T  + CY+   LL++  V                 + +L        L  G+  H  + +
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
                ++ + +SLV+MY+ CG +   + V   +   D+     ++     +    QA   
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA-LLTMYI 264
           F ++    V P+H ++  +L  C     ++EGK      M    L       A ++ +  
Sbjct: 656 FKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLG 715

Query: 265 KCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
           + G  E+A    + + ++   + W +++   + H ++E
Sbjct: 716 RSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHE 753


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 318/570 (55%), Gaps = 3/570 (0%)

Query: 140 HALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HAL  K  +   + +V  SL+NMY K G +     V   MP  +  S + ++AGYA    
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199

Query: 199 FDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
            ++AF  F L L+    + + +  + +L+       +  G+Q+H   +K   L   +V N
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+TMY K G M  A  VFE   +RN I+W+A+I G+ Q+G+ +  + +   M   G  P
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            E+TF   L + + L    +G   H  ++K G  +  +V +A+VDMY+  G I +AK+  
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++      V W A ++G  +N + EEA+  +++M +      + T +S L+AC+ + +L
Sbjct: 380 DQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q+H++IVK        VGS+L   Y+KCG+ ED   VF ++   DV++WNS+I  +
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           SQNG    A+ LFE+M +EG  P N TF+ +L ACSH GLV  G + F  M K+YG+ P 
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPR 558

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CMVD+L RAG L+ A  FI ++ I     +WR +  ACR   D  +  +  ++++
Sbjct: 559 LDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLM 618

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL   D++ Y+ LSN+YA      D E  R LM+++ ++K+PGCSW+E+ ++++ F    
Sbjct: 619 ELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGE 678

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           + H E   +  +L++L + ++D G+  + K
Sbjct: 679 QQHPEAENINAQLRRLAKHMKDEGYHSSSK 708



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 229/476 (48%), Gaps = 15/476 (3%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD--IKSMVAVV 175
           QF IE+L    R  C   G   HA   K+       V  SL+N Y+      + +  AV 
Sbjct: 16  QF-IELLR--RRASCPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVF 72

Query: 176 KQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             +P    D+ S N LL   + +   D    F   L    V P+ ++++         ++
Sbjct: 73  DDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAAS 132

Query: 234 IDEGKQLHAQTMKL-QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
              G   HA   K+   +S   V  +LL MY K G++ DA  VF+G+ QRN  SW+ ++ 
Sbjct: 133 APAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVA 192

Query: 293 GFKQHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           G+      E+   L  LM E+   + +E+  T  L++ +      MG   H  ++K G+ 
Sbjct: 193 GYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLL 252

Query: 352 LGDFVGT--AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
             DFV    ++V MY+  G +  A   + E  +  +S++W+A I G+ +N + + A+  F
Sbjct: 253 --DFVSVENSLVTMYAKAGCM-GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMF 309

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           SQM        EFT+  +L A S L +LA  +Q H  +VK  FE  ++V S+L++ Y KC
Sbjct: 310 SQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKC 369

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G   DA+  F QL   D+V W +M+  + QNG   +A+ L+ +M  EGI P+ ST  + L
Sbjct: 370 GCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGL 429

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            AC+    ++ G+++   +VK YG+       S +  +  + G LE  +     +P
Sbjct: 430 RACAGIAALEPGKQLHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  S    L +G + H LI K  +     V  SLV MYAK G + +   V +     +
Sbjct: 226 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + + ++ GYA+N   D A S F ++      P  +T+  +L     L A+  GKQ H 
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL +  +  V +AL+ MY KCG + DA+  F+ L + +++ WTA+++G  Q+G++E+
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M ++GI P++ T    L +CA +     G   H Q++K G+ LG  VG+A+  
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +     + +      ++WN+ I+GF +N     A++ F +M       D  
Sbjct: 466 MYSKCGNLEDGMSVFRRI-PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNI 524

Query: 423 TYSSILKACS 432
           T+ +IL ACS
Sbjct: 525 TFINILCACS 534



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+  S    L +G++ H L+ K       +V ++LV+MYAKCG I        Q+  
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           +DI     +++G+ +N   ++A + + ++D   + P+  T ++ L  C  ++A++ GKQL
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q +K        V +AL TMY KCG +ED  SVF  +  R+VI+W +II+GF Q+G  
Sbjct: 445 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 504

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-----MALGDF 355
              L L   M+ +G  P+  TF   L +C     SHMG      ++ RG     +   D+
Sbjct: 505 NGALDLFEEMKMEGTIPDNITFINILCAC-----SHMG------LVDRGWEYFSLMTKDY 553

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKE 379
             T  +D Y+ + +I      LKE
Sbjct: 554 GLTPRLDHYACMVDILSRAGMLKE 577



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K  +   L  C+    LE G++ H  I K  +     V ++L  MY+KCG+++  ++V +
Sbjct: 422 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P  D+ + N +++G+++N   + A   F ++      P++ T+  +L  C  +  +D 
Sbjct: 482 RIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDR 541

Query: 237 GKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
           G +  +   K   L+      A ++ +  + GM+++A+   E + +      W  ++   
Sbjct: 542 GWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 601

Query: 295 KQHGDYE 301
           +   D++
Sbjct: 602 RSLRDFD 608


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 214/684 (31%), Positives = 380/684 (55%), Gaps = 29/684 (4%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN--GYSTRNDSFP-----DGFI 96
           AS + C L  KS   A + T++ I +GY    E  I+    G +++ D+        GF+
Sbjct: 18  ASVNHC-LAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFV 76

Query: 97  DDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECL------ELGRRYHALITKTAVCG 150
           + G   T       L+S+    F ++  S+ S  + +      E+G++ H+++ K    G
Sbjct: 77  NLGNFET---ALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEG 133

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL--- 207
           + F  ++L++MYAKC  ++    V K +   +  + N L++GYA+  + D+  +F+L   
Sbjct: 134 NVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQ--VGDRGTAFWLLDC 191

Query: 208 -KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
            +L+G+++     T++ +L +           Q+HA+ +K    S T V NA++T Y +C
Sbjct: 192 MELEGVEIDDG--TFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 267 GMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           G +EDAE VF+G ++ R++++W +++  +  +   E+  +L   M+  G +P+ YT+T  
Sbjct: 250 GSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSV 309

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY--SGLGEIWEAKKQLKEMGKS 383
           +++     +   G   H  VIKRG+     +  +++ MY  S    + EA    + + ++
Sbjct: 310 ISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESL-EN 368

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              VSWN+ + GF ++  +E+A++ F  M       D + +S++L++CS L +L   +Q+
Sbjct: 369 KDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQV 428

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  ++KS FE N  V SSLI  Y+KCG  EDA + F        ++WNS+I  Y+Q+GR 
Sbjct: 429 HVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRG 488

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           + A+ LF  M    ++  + TF+AVL+ACSH GLV++G    +SM  +YGI P   HY+C
Sbjct: 489 KIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYAC 548

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
           M+DLLGRAG+L+ A   I  +P +P A +W+ L  ACR   D+++A  ++  +LEL+P++
Sbjct: 549 MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEE 608

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
              YV LS+M+       +    ++LMK + + K PG SWIEV N++  F ++++SH   
Sbjct: 609 HCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNC 668

Query: 684 PKVYEKLKQLMQQIEDIGHTDNEK 707
            ++Y +L +LM++I  + +  N +
Sbjct: 669 EEIYLRLGELMEEIRRLDYVANSE 692



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 154/311 (49%), Gaps = 5/311 (1%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S +A+      H   +K    +    +N +++ Y KCG +  A  +F    QR+ +SW  
Sbjct: 11  SFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNT 70

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I GF   G++E  L  +  M+  G   + Y+F   L   A +    +G   H+ ++K G
Sbjct: 71  MIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMG 130

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                F G+A++DMY+    + +A +  K +    +SV+WNA I+G+ +      A    
Sbjct: 131 YEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALISGYAQVGDRGTAFWLL 189

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M       D+ T++ +L             Q+H++IVK    S+  V +++I AY++C
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSEC 249

Query: 470 GSWEDAERVF-SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           GS EDAERVF   +   D+V+WNSM+ AY  N +  +A  LF +M V G  P   T+ +V
Sbjct: 250 GSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSV 309

Query: 529 LSAC---SHSG 536
           +SA    SH G
Sbjct: 310 ISAAFEGSHQG 320


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 205/631 (32%), Positives = 336/631 (53%), Gaps = 26/631 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +E G   H L+ K        V  +L+  YAK    K  + V   MP+ D+ S N +++G
Sbjct: 212 IEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISG 271

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
              N L+D+A   F+++     + +  T  ++L  C  L  +  G+ +H  ++K  ++S+
Sbjct: 272 CTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQ 331

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           T+++N LL MY  C        +F  +VQ+NV+SWTA+I  + + G Y+K   L   M  
Sbjct: 332 TSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGL 391

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G  P+ +  T AL + A       G   H   I+ GM     V  A+++MY   G + E
Sbjct: 392 EGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEE 451

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV---RNDAACDEFTYSSILK 429
           AK     +  S   +SWN  I G+ RN    EA   F++M+   R +A     T + IL 
Sbjct: 452 AKLIFDGV-VSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAV----TMTCILP 506

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A + L SL    ++H+  ++  +  +  V ++LI+ Y KCG+   A R+F +L+  +++S
Sbjct: 507 AAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS 566

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W  M+  Y  +GR R AI LFE+M V GI P  ++F A+L ACSHSGL  +G + F++M 
Sbjct: 567 WTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMR 626

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           KE+ I P   HY+CMVDLL   G L+ A  FI ++PI+P + IW  L   CR H ++K+A
Sbjct: 627 KEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLA 686

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           E +++++ EL+P++   YV L+N+YAEA       + +  +  + + +  GCSWIE   K
Sbjct: 687 EEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGK 746

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----EDRVLY------HSERL 718
           ++ F + N++H +  ++ E L ++ +++++ GH   +K      D  ++      HS +L
Sbjct: 747 VHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKL 806

Query: 719 AVGFGLISLP-------AKNKFECSRTLEYA 742
           AV FG+++L         KN   CS   E A
Sbjct: 807 AVAFGVLNLSEGRLIRVTKNSRVCSHCHEAA 837



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 252/514 (49%), Gaps = 10/514 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGD---QFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VL  CS    LE G+R H L+  +++  D     +   LV MY KCGD+++   V  +MP
Sbjct: 97  VLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP 156

Query: 180 YL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            + D+     L++GYAK     +    F K+    V+P+ YT S +L     L +I++G+
Sbjct: 157 QVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGE 216

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H    KL + S+ AV NAL+  Y K    +DA  VF+G+  R+VISW ++I+G   +G
Sbjct: 217 VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNG 276

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            Y+K + L   M  +G + +  T    L +CA L    +G + H   +K G      +  
Sbjct: 277 LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++DMYS   + W +  ++       + VSW A I  + R    ++    F +M      
Sbjct: 337 VLLDMYSNCSD-WRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTR 395

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D F  +S L A +    L   + +H   +++  E  + V ++L+E Y KCG+ E+A+ +
Sbjct: 396 PDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLI 455

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  + + D++SWN++I  YS+N  A +A  LF +M+++ +RP   T   +L A +    +
Sbjct: 456 FDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSL 514

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G+++    ++  G L ++   + ++D+  + G L +A      L  K     W  + A
Sbjct: 515 ERGREMHAYALRR-GYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLIS-WTIMVA 572

Query: 599 ACRCHSDLK--MAEFISKQILELDPDDAAVYVTL 630
               H   +  +A F   ++  + PD A+    L
Sbjct: 573 GYGMHGRGRDAIALFEQMRVSGIAPDAASFSAIL 606



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 2/318 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ VL  C+    L LGR  H    KT       +   L++MY+ C D +S   +
Sbjct: 295 LDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKI 354

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + M   ++ S   ++  Y +  L+D+    F ++     +P+ +  ++ L        +
Sbjct: 355 FRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELL 414

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK +H   ++       AV+NAL+ MY+KCG ME+A+ +F+G+V +++ISW  +I G+
Sbjct: 415 KHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGY 474

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            ++    +   L   M    + PN  T T  L + ASL +   G   HA  ++RG    D
Sbjct: 475 SRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDD 533

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV  A++DMY   G +  A++    +  + + +SW   +AG+  + +  +AI  F QM  
Sbjct: 534 FVANALIDMYVKCGALLLARRLFDRL-SNKNLISWTIMVAGYGMHGRGRDAIALFEQMRV 592

Query: 415 NDAACDEFTYSSILKACS 432
           +  A D  ++S+IL ACS
Sbjct: 593 SGIAPDAASFSAILYACS 610



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 187/381 (49%), Gaps = 13/381 (3%)

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA----LLT 261
            L  DG+D +    +Y  +L +C  + +++ GK+ H   ++   L +  + N     L+ 
Sbjct: 83  LLGSDGVDDR----SYGAVLQLCSEVRSLEGGKRAHF-LVRASSLGRDGMDNVLGQKLVL 137

Query: 262 MYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           MY+KCG +E+A  VF+ + Q  +V  WTA+++G+ + GD  + + L   M   G+ P+ Y
Sbjct: 138 MYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAY 197

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T +  L   A L +   G + H  + K G      VG A++  Y+      +A      M
Sbjct: 198 TISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGM 257

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                 +SWN+ I+G   N   ++AIE F +M       D  T  S+L AC+ L  L   
Sbjct: 258 -PHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLG 316

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
             +H   VK+ F S   + + L++ Y+ C  W    ++F  +   +VVSW +MI +Y++ 
Sbjct: 317 RVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRA 376

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   K   LF++M +EG RP      + L A + + L++ G+ V    ++  G+    A 
Sbjct: 377 GLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN-GMEKVLAV 435

Query: 561 YSCMVDLLGRAGKLEIA-LIF 580
            + ++++  + G +E A LIF
Sbjct: 436 TNALMEMYVKCGNMEEAKLIF 456


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 208/672 (30%), Positives = 356/672 (52%), Gaps = 33/672 (4%)

Query: 36  TVEVKEPFASYSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRN 88
           TV + +   +YS C       Q+F++ P+++  S + L+        E G  R+G     
Sbjct: 98  TVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGA----TENGFYRDGI---- 149

Query: 89  DSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
               D F++    + VP          D+  +   +  C   + + +G   HA +     
Sbjct: 150 ----DYFVEILGCDIVP----------DEYALSAAIQACIGVDSIVVGEMVHAQVITRGF 195

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
               FV  SL+ MYAK G I     V   +   +  S N +++G+  N L+ +A++ FL+
Sbjct: 196 SSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLR 255

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           + G +++PN   + ++    G L  +++G+ ++    ++   S   V  AL+ M+ KCG 
Sbjct: 256 MLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGC 315

Query: 269 MEDAESVFEGLVQRNVIS--WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           + ++ SVF        ++  W A+I+GF   G  E+ + L   M ++ I  + YT+   L
Sbjct: 316 VTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTL 375

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            S A +R+       H  + K G ++G  +  A++D Y+  GE+ +A ++L +  + ++ 
Sbjct: 376 NSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGEL-DAMRKLFDTWEESNQ 433

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           +SW   +  + ++ + E+A+  FSQM       ++ T+S +L +C+ L SL   +Q+HS 
Sbjct: 434 ISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSL 493

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
             K+ F  +  V S LI+ Y KCGS  DA +VF  L   DV+SW +MI  Y+Q+G A+ A
Sbjct: 494 TCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDA 553

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF KM +    P ++TFL +L ACSH GLV +G + F  M + YG++PE  HY+C+VD
Sbjct: 554 LELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVD 613

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           +LGR G+L  A  FI  +PI+P   +W  L  ACR H ++++A+  ++++L  +PDD A 
Sbjct: 614 ILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAA 673

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
            V LSN Y EAG        R +MK + + KE G SWI +  KI++F S ++ H +   +
Sbjct: 674 LVLLSNTYREAGNIEGGLNVRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDI 733

Query: 687 YEKLKQLMQQIE 698
           Y+ L  LM++++
Sbjct: 734 YKTLNVLMEKVQ 745



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 161/306 (52%), Gaps = 13/306 (4%)

Query: 234 IDEGKQLHAQTMKLQYLSK--TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           + + K +H   +K Q + K  T + N L+  Y KC     A  VF+ + Q++V SWT ++
Sbjct: 77  LKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLM 136

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G  ++G Y   +     +    I P+EY  + A+ +C  + +  +G M HAQVI RG +
Sbjct: 137 VGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFS 196

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FV T+++ MY+ LG I ++ K    + ++ + VSWNA I+GF  N    EA  +F +
Sbjct: 197 SRTFVNTSLLGMYAKLGRIGDSCKVFNSL-ENRNQVSWNAMISGFVSNGLYAEAYNSFLR 255

Query: 412 M----VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
           M    +R + AC    + S+ KA   L  +     I+    +   +SN+HVG++LI+ + 
Sbjct: 256 MLGEEIRPNVAC----FISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFA 311

Query: 468 KCGSWEDAERVF-SQLTAADV-VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           KCG   ++  VF S  +   V + WN+MI  ++ +G   +A++LF +M    I+    T+
Sbjct: 312 KCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTY 371

Query: 526 LAVLSA 531
            + L++
Sbjct: 372 CSTLNS 377


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 207/642 (32%), Positives = 344/642 (53%), Gaps = 22/642 (3%)

Query: 99   GCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTAS 157
            G  NTV V   +   LL       +  Y   EE L +GR  H  + +T +   +  V+  
Sbjct: 366  GTRNTVDVNADTYVVLLSA-----LAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNG 420

Query: 158  LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
            LVNMYAKCG I+S   + + M   D  S N +++   +N   ++A   +  +    + P+
Sbjct: 421  LVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPS 480

Query: 218  HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            ++   + L+ C  L  +  G+Q+H   +K      T+VSN L+ MY +CG M D   VF 
Sbjct: 481  NFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN 540

Query: 278  GLVQRNVISWTAIINGF-KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
             + + + +SW  ++           + +++   M   G+ PN+ TF   LA+ + L    
Sbjct: 541  SMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLE 600

Query: 337  MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            +G   HA V+K G+   + V  A++  Y+  G++   +     M     ++SWN+ I+G+
Sbjct: 601  LGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGY 660

Query: 397  FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
              N   +EA++    M+ +    D  T+S IL AC+ + +L    ++H+  ++S  ES+V
Sbjct: 661  IYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDV 720

Query: 457  HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
             V S+L++ Y+KCG  + A ++F+ +T  +  SWNSMI  Y+++G  RKAI +FE+M+  
Sbjct: 721  VVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRS 780

Query: 517  GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
               P + TF++VLSACSH+GLV+ G + FE M+ ++GILP+  HYSC++DLLGRAGK++ 
Sbjct: 781  RESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDK 839

Query: 577  ALIFISNLPIKPTAPIWRPLFAACRCHSD---LKMAEFISKQILELDPDDAAVYVTLSNM 633
               +I  +PI+P A IWR +  ACR   D   + +    S+ +LE++P +   YV  SN 
Sbjct: 840  IKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNF 899

Query: 634  YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            +A  G+  D  + R  M+     KE G SW+ + + ++ F + ++SH    ++YEKL  L
Sbjct: 900  HAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFL 959

Query: 694  MQQIEDIGH---TDNEKEDRVL--------YHSERLAVGFGL 724
            +Q I + G+   T+    D           YHSE+LA+ F L
Sbjct: 960  IQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAFVL 1001



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 221/452 (48%), Gaps = 20/452 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K  +  D F+   LVN YAK   + +   V  +MP  +  S  CL++GY  + + 
Sbjct: 84  HVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIA 143

Query: 200 DQAFSFF---LKLDGIDVQPNHYTYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++AF  F   L+      +P  +T+ T+L  C  G    +    Q+H    K +Y S T 
Sbjct: 144 EEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTT 203

Query: 255 VSNALLTMYIKC--GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM-R 311
           V NAL++MY  C  G    A+ VF+G   R++I+W A+++ + + GD      L   M R
Sbjct: 204 VCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQR 263

Query: 312 EDG---IDPNEYTF-TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
            D    + P E+TF ++  A+  S  +S +       V+K G +   +VG+A+V  ++  
Sbjct: 264 GDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARH 323

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G   EAK     + K  ++V+ N  I G  R   +EEA++ F    RN    +  TY  +
Sbjct: 324 GLTDEAKDIFLSL-KQKNAVTLNGLIVGLVRQDFSEEAVKIFVG-TRNTVDVNADTYVVL 381

Query: 428 LKACSLLP----SLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           L A +        L     +H  ++++   +  + V + L+  Y KCG+ E A ++F  +
Sbjct: 382 LSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLM 441

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A D +SWN++I A  QNG   +A++ +  M    I P+N   ++ LS+C+   L+  GQ
Sbjct: 442 EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQ 501

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           +V    VK +G+  + +  + +V + G  G +
Sbjct: 502 QVHCDAVK-WGLDLDTSVSNVLVKMYGECGAM 532



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 22/323 (6%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + LH + +K        + N L+  Y K   +  A  VF+ + +RN +SWT +++G+  H
Sbjct: 81  ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140

Query: 298 GDYEKPLRLV-CLMRE--DGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMAL 352
           G  E+  R+   ++RE   G  P  +TF   L +C       +G+    H  V K   A 
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200

Query: 353 GDFVGTAIVDMYSG--LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              V  A++ MY    +G    A++   +       ++WNA ++ + +          F 
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVF-DGTPIRDLITWNALMSVYAKKGDVASTFTLFK 259

Query: 411 QMVRNDAACD----EFTYSSILK-ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
            M R D+       E T+ S++  A     S A  +Q+   ++KS   S+++VGS+L+ A
Sbjct: 260 DMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSA 319

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT---- 521
           + + G  ++A+ +F  L   + V+ N +I    +   + +A+ +F      G R T    
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF-----VGTRNTVDVN 374

Query: 522 NSTFLAVLSACSHSGLVQDGQKV 544
             T++ +LSA +   + ++G ++
Sbjct: 375 ADTYVVLLSALAEYSISEEGLRI 397


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 212/630 (33%), Positives = 344/630 (54%), Gaps = 19/630 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L +GR  HA + +  +  +  V  +LV MYAKCGD+++   V   M   D
Sbjct: 201 VLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTD 260

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+ +N   +     FL +   +V+PN  T +++    G LS +D  K++HA
Sbjct: 261 CISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHA 320

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + +  A  N+L+ MY   G M +A +VF  +  R+ +SWTA+I+G++++G  +K
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDK 380

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +  LM  + + P++ T   ALA+CASL    +G   H     +G      V  A+V+
Sbjct: 381 ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVE 440

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A +  K M      +SW++ IAGF  N K  EA+  F  M+  D   +  
Sbjct: 441 MYAKSKIIEKAIEVFKYM-PDKDVISWSSMIAGFCFNHKNFEALYYFRHML-ADVKPNSV 498

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ + L AC+   SL   ++IH+ +++    S  +V ++L++ Y KCG    A   F   
Sbjct: 499 TFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAH 558

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN M+  +  +G    A+  F +M+  G  P   TF+A+L  CS +G+V  G 
Sbjct: 559 GTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGW 618

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++F SM ++Y I+P   HY+CMVDLL R G+L     FI+ +PI P A +W  L   CR 
Sbjct: 619 ELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRI 678

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++ E  +K +LEL+P+DA  +V LS++YA+AG+ A+  + RK M++K +  + GCS
Sbjct: 679 HRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCS 738

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE----------KEDRVL 712
           W+EV   I+ F + ++SH ++ ++ + L  + ++++  G    E          K+D + 
Sbjct: 739 WVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLEDKEVSKDDVLC 798

Query: 713 YHSERLAVGFGLISLP-------AKNKFEC 735
            HSERLAV FGLI+          KN++ C
Sbjct: 799 GHSERLAVAFGLINTTPGTSICVTKNQYTC 828



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 243/490 (49%), Gaps = 5/490 (1%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++++M  + G+      V  +MP  D+ S N ++ GY K    ++A   + ++     +P
Sbjct: 134 AMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARP 193

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + YT+  +L  CG +  +  G+++HA  ++     +  V NAL+TMY KCG +E A  VF
Sbjct: 194 DVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVF 253

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           +G+   + ISW A+I G  ++ + E  L L   M ED ++PN  T T    +   L +  
Sbjct: 254 DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLD 313

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                HA  +KRG A       +++ MYS LG + EA      M ++  ++SW A I+G+
Sbjct: 314 FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRM-ETRDAMSWTAMISGY 372

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N   ++A+E ++ M  N+ + D+ T +S L AC+ L  L    ++H       F   +
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L+E Y K    E A  VF  +   DV+SW+SMI  +  N +  +A+  F  M+ +
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD 492

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            ++P + TF+A L+AC+ +G ++ G+++   ++++ GI  E    + ++DL  + G+   
Sbjct: 493 -VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQ-GIASEGYVPNALLDLYVKCGQTGY 550

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL-DPDDAAVYVTLSNMYA 635
           A         K     W  + A    H    +A     ++LE  +  D   +V L    +
Sbjct: 551 AWAQFGAHGTKDVVS-WNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609

Query: 636 EAGLQADAEE 645
            AG+ +   E
Sbjct: 610 RAGMVSQGWE 619



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 4/408 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+   Y  +  +C    A + G +               + NA+L+M ++ G    A  V
Sbjct: 92  PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKV 151

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  + +R+V SW  ++ G+ + G  E+ L L   M   G  P+ YTF   L SC  + + 
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDL 211

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            MG   HA V++ G+ +   V  A+V MY+  G++  A+K    M  +   +SWNA IAG
Sbjct: 212 TMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLT-DCISWNAMIAG 270

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            F N + E  +E F  M+ ++   +  T +S+  A  LL  L   ++IH+  VK  F ++
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V   +SLI+ Y+  G   +A  VFS++   D +SW +MI  Y +NG   KA+ ++  M V
Sbjct: 331 VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T  + L+AC+  G +  G K+ E +    G +      + +V++  ++  +E
Sbjct: 391 NNVSPDDVTVASALAACASLGRLDVGIKLHE-LATSKGFIRYIVVANALVEMYAKSKIIE 449

Query: 576 IALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFISKQILELDPD 622
            A+     +P K     W  + A  C  H + +   +    + ++ P+
Sbjct: 450 KAIEVFKYMPDKDVIS-WSSMIAGFCFNHKNFEALYYFRHMLADVKPN 496


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 191/574 (33%), Positives = 314/574 (54%), Gaps = 1/574 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C + E +  G++ H    K     D +V  SL+ MY KC  I+S   V  ++P  +I
Sbjct: 248 LSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEI 307

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N L++ Y  N     A   + ++    V  + +T   +L         D G+ +H +
Sbjct: 308 ELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTE 367

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K    S   + +ALLTMY K G    A S+F  + +R+V++W ++I+GF Q+  Y++ 
Sbjct: 368 IVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEA 427

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L     M  D + P+       +++C  L    +G   H  VIK G+ L  FV ++++DM
Sbjct: 428 LDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDM 487

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS  G    A     +M    + V+WN+ I+ + RN   + +I  FSQ++RND   D  +
Sbjct: 488 YSKFGFPERAGNIFSDM-PLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVS 546

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++S+L A S + +L   + +H  +V+     ++ V ++LI+ Y KCG  + A+ +F +++
Sbjct: 547 FTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERIS 606

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++V+WNSMI  Y  +G   KAI LF++M   GI+P + TFL++LS+C+HSGL+++G  
Sbjct: 607 EKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLH 666

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +FE M  ++GI P   HY  +VDL GRAG L  A  F+ N+P++P   IW  L  +C+ H
Sbjct: 667 LFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIH 726

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            +L++ E ++ ++L ++P   + YV L N+Y EA L       R  MK K + K PGCSW
Sbjct: 727 LNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSW 786

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           IEV NK+  F+S + S     ++Y+ L  L + +
Sbjct: 787 IEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNM 820



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/522 (25%), Positives = 256/522 (49%), Gaps = 9/522 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-YLDIASCNCLLAGYA 194
           G++ H+ I +  +  D F+  +L++ Y KCG       + K++    +I + N ++ G+ 
Sbjct: 158 GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N L++ +  ++L     +V+    +++  L+ CG    +  GKQ+H   +K+ +     
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V  +LLTMY KC M+E AE VF  +  + +  W A+I+ +  +G     LR+   M+   
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  + +T    L S +      +G + H +++KR +     + +A++ MYS  G+   A 
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
                M K    V+W + I+GF +N+K +EA++ F  M  +    D    +SI+ AC+ L
Sbjct: 398 SIFSTM-KERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGL 456

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             +     IH  ++KS  + +V V SSL++ Y+K G  E A  +FS +   ++V+WNS+I
Sbjct: 457 EKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSII 516

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y +N     +I LF +++   + P + +F +VL+A S    +  G+ V   +V+ +  
Sbjct: 517 SCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLW-- 574

Query: 555 LPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EF 611
           +P +    + ++D+  + G L+ A      +  K     W  +      H +   A   F
Sbjct: 575 IPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVA-WNSMIGGYGSHGECSKAIELF 633

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
              +   + PDD   +++L +    +GL  +     ++MKMK
Sbjct: 634 DEMRSSGIKPDDVT-FLSLLSSCNHSGLIEEGLHLFEMMKMK 674



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 242/526 (46%), Gaps = 33/526 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--- 179
           +L  C+    L+ G+  H+ I  T +  DQ++T+SL+N+Y KCG     V V  Q+P   
Sbjct: 59  LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118

Query: 180 --YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
               D+   N ++ GY +    ++    F ++                      S   EG
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQS--------------------SGYKEG 158

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQ 296
           KQ+H+  ++        +  AL+  Y KCG   +A  +F+ L  R N+++W  +I GF +
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G +E  L    L + + +     +FT  L++C        G   H   IK G     +V
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            T+++ MY     I  A+K   E+      + WNA I+ +  N    +A+  + QM    
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIEL-WNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D FT  ++L + S+         IH+ IVK   +S++ + S+L+  Y+K G    A 
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +FS +   DVV+W S+I  + QN + ++A+  F  M  + ++P +    +++SAC+   
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            V  G  +   ++K  G+  +    S ++D+  + G  E A    S++P+K     W  +
Sbjct: 458 KVDLGCTIHGFVIKS-GLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVA-WNSI 515

Query: 597 FAACRCHSDL-KMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGL 639
             +C C ++L  ++  +  Q+L  +L PD  +    L+ + + A L
Sbjct: 516 I-SCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAAL 560



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 166/343 (48%), Gaps = 25/343 (7%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V    +TY ++L  C SLS +  GK +H+  +     S   ++++L+ +Y+KCG   DA 
Sbjct: 49  VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAV 108

Query: 274 SVFE-----GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            VF+     G+   +V  W +II+G+ + G  E+ +     M+  G              
Sbjct: 109 KVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYKE----------- 157

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
                    G   H+ +++  +    F+ TA++D Y   G   EA+   K++   ++ V+
Sbjct: 158 ---------GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVA 208

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN  I GF  N   E ++E +      +      +++  L AC     ++  +Q+H   +
Sbjct: 209 WNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAI 268

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  FE + +V +SL+  Y KC   E AE+VF+++   ++  WN++I AY  NG A  A+ 
Sbjct: 269 KVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALR 328

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++++M +  +   + T L VL++ S +GL   G+ +   +VK 
Sbjct: 329 IYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKR 371



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 147/271 (54%), Gaps = 11/271 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++S C+  E ++LG   H  + K+ +  D FV +SL++MY+K G  +    + 
Sbjct: 442 DSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIF 501

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  ++ + N +++ Y +N L D + + F ++   D+ P+  +++++LA   S++A+ 
Sbjct: 502 SDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALL 561

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK +H   ++L       V N L+ MYIKCG+++ A+ +FE + ++N+++W ++I G+ 
Sbjct: 562 KGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYG 621

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRG 349
            HG+  K + L   MR  GI P++ TF   L+SC     +H G      ++F    +K G
Sbjct: 622 SHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSC-----NHSGLIEEGLHLFEMMKMKFG 676

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           +         IVD+Y   G + +A   +K M
Sbjct: 677 IEPRMEHYVNIVDLYGRAGCLGDAYSFVKNM 707



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   ++ VL+  S     +LGR  H  I K  +     + ++L+ MY+K GD     +
Sbjct: 339 LSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANS 398

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +   M   D+ +   +++G+ +N  + +A  FF  ++   V+P+    +++++ C  L  
Sbjct: 399 IFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEK 458

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +D G  +H   +K        V+++LL MY K G  E A ++F  +  +N+++W +II+ 
Sbjct: 459 VDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISC 518

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + ++   +  + L   +  + + P+  +FT  LA+ +S+     G   H  +++  +   
Sbjct: 519 YCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFD 578

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V   ++DMY   G +  A+   + + +  + V+WN+ I G+  + +  +AIE F +M 
Sbjct: 579 LQVENTLIDMYIKCGLLKYAQHIFERISEK-NLVAWNSMIGGYGSHGECSKAIELFDEMR 637

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIH-SRIVKSKF--ESNVHVGSSLIEAYNKCG 470
            +    D+ T+ S+L +C+   S    E +H   ++K KF  E  +    ++++ Y + G
Sbjct: 638 SSGIKPDDVTFLSLLSSCN--HSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695

Query: 471 SWEDA 475
              DA
Sbjct: 696 CLGDA 700



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 51/322 (15%)

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +  + IEA     ++      FTY S+LKAC+ L +L   + IHS I+ +   S+ ++ S
Sbjct: 33  QQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITS 92

Query: 461 SLIEAYNKCGSWEDAERVFSQL-----TAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           SLI  Y KCG++ DA +VF QL     +  DV  WNS+I  Y + G+  + ++ F +M  
Sbjct: 93  SLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQS 152

Query: 516 EGIRPTNST-------------FL--AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
            G +                  FL  A++      G   + + +F+ +     I+     
Sbjct: 153 SGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVA---- 208

Query: 561 YSCMVDLLGRAGKLEIAL---IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS--KQ 615
           ++ M+   G  G  E +L   +      +K  +  +    +AC         EF+S  KQ
Sbjct: 209 WNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSAC------GQGEFVSFGKQ 262

Query: 616 ILELDP------DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           +   D       DD  V+ +L  MY +  +   AE+    +  KE         IE++N 
Sbjct: 263 V-HCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKE---------IELWNA 312

Query: 670 IYRFFSQNKSHSEMPKVYEKLK 691
           +   +  N    +  ++Y+++K
Sbjct: 313 LISAYVGNGYAYDALRIYKQMK 334


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 188/544 (34%), Positives = 324/544 (59%), Gaps = 5/544 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL+ C+    ++   + H+ I KT    D  V+++L+NMY+K G +     V ++M 
Sbjct: 352 ITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREME 411

Query: 180 YL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++A    +++ +A++    +A   F ++    ++P+ +  S++L+I  SLS    G+
Sbjct: 412 STKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GR 468

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H   +K+   +  +V ++L TMY KCG +E++ +VFE +  ++ +SW ++I GF +H 
Sbjct: 469 LIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHD 528

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             E+ ++L   M  + I P++ T T AL +C++L +   G   H   ++  +     VG 
Sbjct: 529 HAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGG 588

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V+MYS  G I  A++   +M       S ++ ++G+ +N   E+A+  F ++   D  
Sbjct: 589 ALVNMYSKCGAIVLARRVF-DMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLW 647

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT SS++ A ++L SL    Q+H+ + K    + V VGSSL+  Y+KCGS ++  +V
Sbjct: 648 IDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKV 707

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F Q+   D++SW +MI +Y+Q+G+  +A+ +++ M  EG +P + TF+ VLSACSH+G+V
Sbjct: 708 FEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMV 767

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G     SM KEYGI P   HY+CMVDLLGR+G+L+ A  FI+N+PI+P A +W  L A
Sbjct: 768 EEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLA 827

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           AC+ H D+++    +K+++EL+P +A  YVTLSN+ A+ G   D  + R LM+   + KE
Sbjct: 828 ACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKE 887

Query: 659 PGCS 662
           PG S
Sbjct: 888 PGWS 891



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 285/607 (46%), Gaps = 52/607 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+       G   ++L  K     + +V A +++++AK    +  + V + +   +
Sbjct: 153 VLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCEN 212

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +++G  KN     A   F ++      PN +T+S++L  C +L  ++ G+ +  
Sbjct: 213 VVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQG 272

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V  A++ +Y KC  M+ A   F  +  RNV+SWT II+GF Q  D   
Sbjct: 273 WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSIS 332

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                  MR+ G   N YT T  L +C            H+ + K G  L   V +A+++
Sbjct: 333 AFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALIN 392

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS +G +  +++  +EM  + +   W   I+ F ++  T  A+E F +M++     D+F
Sbjct: 393 MYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKF 452

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             SS+L   S++ SL+    IH  I+K    +++ VGSSL   Y+KCGS E++  VF Q+
Sbjct: 453 CSSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQM 509

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSW SMI  +S++  A +A+ LF +M++E IRP   T  A L+ACS    ++ G+
Sbjct: 510 PDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGK 569

Query: 543 KVF----------ESMV------------------KEYGILPEEAHYSC--MVDLLGRAG 572
           +V           E +V                  + + +LP++  +SC  +V    + G
Sbjct: 570 EVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNG 629

Query: 573 KLEIALIFISNLPIKPTAPIWRPLF------AACRCHSDLKMAEFISKQILELDPD-DAA 625
            +E AL+    + +   A +W   F       A    + L +   +   + ++  + + +
Sbjct: 630 YIEDALLLFHEIRM---ADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVS 686

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
           V  +L  MY++ G     +E  K+   ++I K    SW  +       ++Q+   +E  K
Sbjct: 687 VGSSLVTMYSKCG---SIDECHKV--FEQIEKPDLISWTAMIVS----YAQHGKGAEALK 737

Query: 686 VYEKLKQ 692
           VY+ +++
Sbjct: 738 VYDLMRK 744



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 266/539 (49%), Gaps = 19/539 (3%)

Query: 140 HALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HA   KTA+   + F+T SL+  Y K   +   + +  + P+ ++ S N L++G  +N  
Sbjct: 68  HAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFS 127

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           F+ ++  F K+      PN +TY ++L+ C +L +   G+ +++  +K  + S   V   
Sbjct: 128 FEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAG 187

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           ++ ++ K    EDA  VF+ ++  NV+ W AII+G  ++ +    L L C M      PN
Sbjct: 188 MIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPN 247

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            +TF+  L +CA+L     G      VIK G     FVGTAI+D+Y+   ++ +A K+  
Sbjct: 248 SFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFL 307

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            M    + VSW   I+GF +   +  A   F +M +     + +T +S+L AC+    + 
Sbjct: 308 RM-PIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIK 366

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAY 497
              Q+HS I K+ F  + +V S+LI  Y+K G  + +ERVF ++ +  ++  W  MI A+
Sbjct: 367 EAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAF 426

Query: 498 SQNGRARKAIILFEKMVVEGIRPT---NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           +Q+G   +A+ LF++M+ EG+RP    +S+ L+++ + S   L+          + + G+
Sbjct: 427 AQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIH-------CYILKIGL 479

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
             + +  S +  +  + G LE +      +P K     W  +      H   + A  + +
Sbjct: 480 FTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVS-WASMITGFSEHDHAEQAVQLFR 538

Query: 615 QIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE--PGCSWIEVYNK 669
           ++L  E+ PD   +   L+   A   L+   E     ++ + + KE   G + + +Y+K
Sbjct: 539 EMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRAR-VGKEVLVGGALVNMYSK 596



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 147/281 (52%), Gaps = 1/281 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +   L+ CS    LE G+  H    +  V  +  V  +LVNMY+KCG I     V 
Sbjct: 548 DQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVF 607

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  D  SC+ L++GYA+N   + A   F ++   D+  + +T S+++     L+++D
Sbjct: 608 DMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLD 667

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLHA   K+   ++ +V ++L+TMY KCG +++   VFE + + ++ISWTA+I  + 
Sbjct: 668 IGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYA 727

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGD 354
           QHG   + L++  LMR++G  P+  TF   L++C+       GY     + K  G+  G 
Sbjct: 728 QHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGY 787

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +    +VD+    G + EA++ +  M     ++ W   +A 
Sbjct: 788 YHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAA 828


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 328/616 (53%), Gaps = 16/616 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     ++ G   H +I K  + GD  +   L++MY K   ++    V  +M   D
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
             + N ++ GYA+    + +   F+ + DG    P+  + ++ +  CG    +  GK +H
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDMIDGF--VPDMLSITSTIRACGQSGDLQVGKFVH 345

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   +   T   N L+ MY KCG +  A+ VF+    ++ ++W ++ING+ Q G Y+
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L    +M+ +   P+  TF + L+  + L + + G   H  VIK G      +G +++
Sbjct: 406 EGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D+Y+  GE+ +  K    M  +   +SWN  IA            +  ++M       DE
Sbjct: 465 DVYAKCGEMDDLLKVFSYM-SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDE 523

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T   IL  CSLL      ++IH  I KS FESNV +G++LIE Y+KCGS E+  +VF  
Sbjct: 524 ATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKY 583

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVV+W ++I A+   G  +KA+  F+ M + G+ P +  F+A + ACSHSG+V++G
Sbjct: 584 MKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F+ M  +Y + P   HY+C+VDLL R+G L  A  FI ++P+KP A +W  L +ACR
Sbjct: 644 LRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACR 703

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              +  +A+ +SK+ILEL+ DD   YV +SN+YA  G     +  R  MK K + KEPG 
Sbjct: 704 ARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGS 763

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SWIE+  ++Y F + +KS  +  KV + L+ L++ +   G+            +++K D 
Sbjct: 764 SWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDM 823

Query: 711 VLYHSERLAVGFGLIS 726
           +  HSERLA+ FGL++
Sbjct: 824 LCGHSERLAIAFGLLN 839



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 7/505 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+R   LELG   H    +     D ++  +L++MY++  D+ +   V ++M   D
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N L++GY  N  ++ A   + K     + P+ +T S++L  CGSL A+ EG  +H 
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K+       + N LL+MY K   + +A  VF  +  ++ ++W  +I G+ Q G +E 
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M  DG  P+  + T  + +C    +  +G   H  +I  G          ++D
Sbjct: 307 SVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++  A +++ +  K   SV+WN+ I G+ ++   +E +E+F +M++ +   D  
Sbjct: 366 MYAKCGDLL-AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSV 423

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+  +L   S L  +     IH  ++K  FE+ + +G+SL++ Y KCG  +D  +VFS +
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +A D++SWN++I +            +  +M  EG+ P  +T L +L  CS   + + G+
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   + K  G        + ++++  + G LE  +     +  K     W  L +A   
Sbjct: 544 EIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT-WTALISAFGM 601

Query: 603 HSDLKMA--EFISKQILELDPDDAA 625
           + + K A   F   ++  + PD  A
Sbjct: 602 YGEGKKALKAFQDMELSGVLPDSVA 626



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 259/537 (48%), Gaps = 9/537 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAK 195
           R  H+LI  + +      +  L++ YA+  D  S V+V + + P  ++   N ++     
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N LF QA  ++ ++    +QP+ +T+ +++  C  +  ++ G  +H   M++ + S   +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+ MY +   +++A  VFE +  R+ +SW ++I+G+  +G +E  L +    R  G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ +T +  L +C SL     G   H  + K G+A    +G  ++ MY     + EA++
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              +M     SV+WN  I G+ +  + E +++ F  M+ +    D  + +S ++AC    
Sbjct: 279 VFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSG 336

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   + +H  ++ S FE +    + LI+ Y KCG    A+ VF      D V+WNS+I 
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLIN 396

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+Q+G  ++ +  F+ M +E  +P + TF+ +LS  S    +  G+ +   ++K +G  
Sbjct: 397 GYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFE 454

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISK 614
            E    + ++D+  + G+++  L   S +        W  + A+     D  +  + I++
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVIASSVHFDDCTVGFQMINE 513

Query: 615 QILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-GCSWIEVYNK 669
              E L PD+A V   L      A  +   E    + K    S  P G + IE+Y+K
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 2/313 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +   +  C +   L++G+  H  +  +    D      L++MYAKCGD+ +   V     
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N L+ GY ++  + +    F K+  ++ +P+  T+  +L+I   L+ I++G+ 
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRG 443

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K  + ++  + N+LL +Y KCG M+D   VF  +   ++ISW  +I       D
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
                +++  MR +G+ P+E T    L  C+ L     G   H  + K G      +G A
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNA 563

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +++MYS  G +    K  K M K    V+W A I+ F    + ++A++AF  M  +    
Sbjct: 564 LIEMYSKCGSLENCIKVFKYM-KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLP 622

Query: 420 DEFTYSSILKACS 432
           D   + + + ACS
Sbjct: 623 DSVAFIAFIFACS 635



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 23/292 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + +LS  S+   +  GR  H  + K     +  +  SL+++YAKCG++  ++ V 
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   DI S N ++A           F    ++    + P+  T   +L +C  L+   
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++H    K  + S   + NAL+ MY KCG +E+   VF+ + +++V++WTA+I+ F 
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G+ +K L+    M   G+ P+   F   + +C+           H+ ++K G+   D 
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS-----------HSGMVKEGLRFFDR 649

Query: 356 VGT------------AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           + T             +VD+ +  G + +A++ +  M     +  W A ++ 
Sbjct: 650 MKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 118/236 (50%), Gaps = 1/236 (0%)

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           E+  +  L + +S +N+      H+ +I  G++L       ++  Y+ + +   +    +
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            +  + +   WN+ I     N    +A+  +++M       D FT+ S++ +C+ +  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +H   ++  FES++++G++LI+ Y++    ++A  VF +++  D VSWNS+I  Y 
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            NG    A+ ++ K  + G+ P   T  +VL AC     V++G  V   ++++ GI
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV-HGVIEKIGI 253



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 4/187 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +L  CS       G+  H  I K+    +  +  +L+ MY+KCG +++ + V 
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K M   D+ +   L++ +       +A   F  ++   V P+   +   +  C     + 
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIIN 292
           EG +   + MK  Y  +  + +   ++ +  + G++  AE     +  +   S W A+++
Sbjct: 642 EGLRFFDR-MKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700

Query: 293 GFKQHGD 299
             +  G+
Sbjct: 701 ACRARGN 707


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 200/629 (31%), Positives = 333/629 (52%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  GR  HA +    +  +     +L NMYAKC        V  +MP  D
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLH 241
             + N L+AGYA+N L   A    +++   + + P+  T  ++L  C +  A+   ++ H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  ++        V+ A+L  Y KCG +  A  VF+ +  +N +SW A+I+G+ Q+GD  
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M E+G+D  + +   AL +C  L     G   H  +++ G+     V  A++
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS    +  A     E+ +  + VSWNA I G  +N  +E+A+  F++M   +   D 
Sbjct: 305 TMYSKCKRVDLASHVFDELDRR-TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT  S++ A + +        IH   ++   + +V+V ++LI+ Y KCG    A  +F+ 
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
                V++WN+MI  Y  +G  + A+ LFE+M   GI P  +TFL+VLSACSH+GLV +G
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           ++ F SM ++YG+ P   HY  MVDLLGRAGKL+ A  FI  +P+ P   ++  +  AC+
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACK 543

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++AE  +++I EL P +   +V L+N+YA A +  D    R  M+   + K PG 
Sbjct: 544 LHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGW 603

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRV 711
           S I++ N+I+ F+S + +H +  ++Y +L +L+++I+ +G+           D+ K   +
Sbjct: 604 SIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLL 663

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSE+LA+ FGLI        +  + L 
Sbjct: 664 NTHSEKLAIAFGLIRTAPGTTIQIKKNLR 692



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 11/387 (2%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A + F+ +      P   T++++L +C +   +  G+ +HAQ       S+   + AL  
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEY 320
           MY KC    DA  VF+ +  R+ ++W A++ G+ ++G     + +V  M+ E+G  P+  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L +CA+ R        HA  I+ G+     V TAI+D Y   G+I  A+     M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
             + +SVSWNA I G+ +N  + EA+  F++MV       + +  + L+AC  L  L   
Sbjct: 223 -PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            ++H  +V+   +SNV V ++LI  Y+KC   + A  VF +L     VSWN+MI   +QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI---LPE 557
           G +  A+ LF +M +E ++P + T ++V+ A     L      +    +  Y I   L +
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQ 396

Query: 558 EAH-YSCMVDLLGRAGKLEIALIFISN 583
           + +  + ++D+  + G++ IA I  ++
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNS 423



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 158/328 (48%), Gaps = 8/328 (2%)

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           D    L     M   G  P   TFT  L  CA+  +   G   HAQ+  RG+       T
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+ +MY+      +A++    M      V+WNA +AG+ RN     A+E   +M   +  
Sbjct: 99  ALANMYAKCRRPADARRVFDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 419 -CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S+L AC+   +LA C + H+  ++S  E  V+V +++++AY KCG    A  
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  +   + VSWN+MI  Y+QNG +R+A+ LF +MV EG+  T+ + LA L AC   G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           + +G +V E +V+  G+    +  + ++ +  +  ++++A      L  + T   W  + 
Sbjct: 278 LDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAMI 335

Query: 598 AACR---CHSDLKMAEFISKQILELDPD 622
             C    C  D  +  F   Q+  + PD
Sbjct: 336 LGCAQNGCSED-AVRLFTRMQLENVKPD 362


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 328/616 (53%), Gaps = 16/616 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     ++ G   H +I K  + GD  +   L++MY K   ++    V  +M   D
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
             + N ++ GYA+    + +   F+ + DG    P+  + ++ +  CG    +  GK +H
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMDMIDGF--VPDMLSITSTIRACGQSGDLQVGKFVH 345

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   +   T   N L+ MY KCG +  A+ VF+    ++ ++W ++ING+ Q G Y+
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L    +M+ +   P+  TF + L+  + L + + G   H  VIK G      +G +++
Sbjct: 406 EGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D+Y+  GE+ +  K    M  +   +SWN  IA            +  ++M       DE
Sbjct: 465 DVYAKCGEMDDLLKVFSYM-SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDE 523

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T   IL  CSLL      ++IH  I KS FESNV +G++LIE Y+KCGS E+  +VF  
Sbjct: 524 ATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKY 583

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVV+W ++I A+   G  +KA+  F+ M + G+ P +  F+A + ACSHSG+V++G
Sbjct: 584 MKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEG 643

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F+ M  +Y + P   HY+C+VDLL R+G L  A  FI ++P+KP A +W  L +ACR
Sbjct: 644 LRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACR 703

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
              +  +A+ +SK+ILEL+ DD   YV +SN+YA  G     +  R  MK K + KEPG 
Sbjct: 704 ARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGS 763

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SWIE+  ++Y F + +KS  +  KV + L+ L++ +   G+            +++K D 
Sbjct: 764 SWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDM 823

Query: 711 VLYHSERLAVGFGLIS 726
           +  HSERLA+ FGL++
Sbjct: 824 LCGHSERLAIAFGLLN 839



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 7/505 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+R   LELG   H    +     D ++  +L++MY++  D+ +   V ++M   D
Sbjct: 127 VINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRD 186

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N L++GY  N  ++ A   + K     + P+ +T S++L  CGSL A+ EG  +H 
Sbjct: 187 SVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHG 246

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K+       + N LL+MY K   + +A  VF  +  ++ ++W  +I G+ Q G +E 
Sbjct: 247 VIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M  DG  P+  + T  + +C    +  +G   H  +I  G          ++D
Sbjct: 307 SVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++  A +++ +  K   SV+WN+ I G+ ++   +E +E+F +M++ +   D  
Sbjct: 366 MYAKCGDLL-AAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSV 423

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+  +L   S L  +     IH  ++K  FE+ + +G+SL++ Y KCG  +D  +VFS +
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +A D++SWN++I +            +  +M  EG+ P  +T L +L  CS   + + G+
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++   + K  G        + ++++  + G LE  +     +  K     W  L +A   
Sbjct: 544 EIHGYIFKS-GFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT-WTALISAFGM 601

Query: 603 HSDLKMA--EFISKQILELDPDDAA 625
           + + K A   F   ++  + PD  A
Sbjct: 602 YGEGKKALKAFQDMELSGVLPDSVA 626



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/537 (25%), Positives = 259/537 (48%), Gaps = 9/537 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAK 195
           R  H+LI  + +      +  L++ YA+  D  S V+V + + P  ++   N ++     
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N LF QA  ++ ++    +QP+ +T+ +++  C  +  ++ G  +H   M++ + S   +
Sbjct: 99  NGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYI 158

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+ MY +   +++A  VFE +  R+ +SW ++I+G+  +G +E  L +    R  G+
Sbjct: 159 GNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGM 218

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ +T +  L +C SL     G   H  + K G+A    +G  ++ MY     + EA++
Sbjct: 219 VPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARR 278

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              +M     SV+WN  I G+ +  + E +++ F  M+ +    D  + +S ++AC    
Sbjct: 279 VFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSG 336

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   + +H  ++ S FE +    + LI+ Y KCG    A+ VF      D V+WNS+I 
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLIN 396

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+Q+G  ++ +  F+ M +E  +P + TF+ +LS  S    +  G+ +   ++K +G  
Sbjct: 397 GYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGFE 454

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISK 614
            E    + ++D+  + G+++  L   S +        W  + A+     D  +  + I++
Sbjct: 455 AELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIIS-WNTVIASSVHFDDCTVGFQMINE 513

Query: 615 QILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-GCSWIEVYNK 669
              E L PD+A V   L      A  +   E    + K    S  P G + IE+Y+K
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 149/313 (47%), Gaps = 2/313 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +   +  C +   L++G+  H  +  +    D      L++MYAKCGD+ +   V     
Sbjct: 325 ITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK 384

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N L+ GY ++  + +    F K+  ++ +P+  T+  +L+I   L+ I++G+ 
Sbjct: 385 CKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRG 443

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K  + ++  + N+LL +Y KCG M+D   VF  +   ++ISW  +I       D
Sbjct: 444 IHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDD 503

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
                +++  MR +G+ P+E T    L  C+ L     G   H  + K G      +G A
Sbjct: 504 CTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNA 563

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +++MYS  G +    K  K M K    V+W A I+ F    + ++A++AF  M  +    
Sbjct: 564 LIEMYSKCGSLENCIKVFKYM-KEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLP 622

Query: 420 DEFTYSSILKACS 432
           D   + + + ACS
Sbjct: 623 DSVAFIAFIFACS 635



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 137/296 (46%), Gaps = 23/296 (7%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           +E   D    + +LS  S+   +  GR  H  + K     +  +  SL+++YAKCG++  
Sbjct: 416 MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDD 475

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
           ++ V   M   DI S N ++A           F    ++    + P+  T   +L +C  
Sbjct: 476 LLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSL 535

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L+   +GK++H    K  + S   + NAL+ MY KCG +E+   VF+ + +++V++WTA+
Sbjct: 536 LAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTAL 595

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+ F  +G+ +K L+    M   G+ P+   F   + +C+           H+ ++K G+
Sbjct: 596 ISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACS-----------HSGMVKEGL 644

Query: 351 ALGDFVGT------------AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              D + T             +VD+ +  G + +A++ +  M     +  W A ++
Sbjct: 645 RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/409 (19%), Positives = 177/409 (43%), Gaps = 48/409 (11%)

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           E+  +  L + +S +N+      H+ +I  G++L       ++  Y+ + +   +    +
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            +  + +   WN+ I     N    +A+  +++M       D FT+ S++ +C+ +  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +H   ++  FES++++G++LI+ Y++    ++A  VF +++  D VSWNS+I  Y 
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            NG    A+ ++ K  + G+ P   T  +VL AC     V++G  V   ++++ GI  + 
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV-HGVIEKIGIAGDV 257

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA-------------------- 598
              + ++ +  +  +L  A    S + +K +   W  +                      
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVT-WNTMICGYAQLGRHEASVKLFMDMID 316

Query: 599 --------------ACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQAD 642
                         AC    DL++ +F+ K ++    + D  A  + L +MYA+ G    
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNI-LIDMYAKCG---- 371

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
                 L+  +E+     C     +N +   ++Q+  + E  + ++ +K
Sbjct: 372 -----DLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMK 415



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 4/187 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +L  CS       G+  H  I K+    +  +  +L+ MY+KCG +++ + V 
Sbjct: 522 DEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF 581

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K M   D+ +   L++ +       +A   F  ++   V P+   +   +  C     + 
Sbjct: 582 KYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVK 641

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIIN 292
           EG +   + MK  Y  +  + +   ++ +  + G++  AE     +  +   S W A+++
Sbjct: 642 EGLRFFDR-MKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLS 700

Query: 293 GFKQHGD 299
             +  G+
Sbjct: 701 ACRARGN 707


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/620 (31%), Positives = 333/620 (53%), Gaps = 13/620 (2%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            L+ GR  H L+ K  +  +  +  +L+ +Y++ G  +    V + M   D+ S N ++A 
Sbjct: 414  LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 473

Query: 193  YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            Y ++           +L  +    NH T+++ LA C +   + E K +HA  +   +   
Sbjct: 474  YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 533

Query: 253  TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              V NAL+TMY K GMM +A+ V + + Q + ++W A+I G  ++ +  + ++   L+RE
Sbjct: 534  LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 593

Query: 313  DGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI  N  T    L +C++  +    G   HA ++  G    D+V  +++ MY+  G++ 
Sbjct: 594  KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 653

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
             +      +G + S ++WNA +A    +   EEA++ F +M       D+F++S  L A 
Sbjct: 654  SSNYIFDGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 712

Query: 432  SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            + L  L   +Q+H  ++K  FES++HV ++ ++ Y KCG   D  ++  Q      +SWN
Sbjct: 713  ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 772

Query: 492  SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
             +I A++++G  +KA   F +M+  G +P + TF+++LSAC+H GLV +G   ++SM +E
Sbjct: 773  ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 832

Query: 552  YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
            +G+ P   H  C++DLLGR+G+L  A  FI  +P+ P    WR L AACR H +L++A  
Sbjct: 833  FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 892

Query: 612  ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             ++ +LELDP D + YV  SN+ A +G   D E  RK M    I K+P CSW+++ +K++
Sbjct: 893  TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 952

Query: 672  RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
             F    K H +  ++  KL +LM+  ++ G+            + +KE  +  HSERLA+
Sbjct: 953  SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1012

Query: 721  GFGLISLPAKNKFECSRTLE 740
             FGLI+ P  +     + L 
Sbjct: 1013 AFGLINTPESSTLRIFKNLR 1032



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 234/465 (50%), Gaps = 4/465 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  HA     +V    F T +L+NMY+K G+I+    V  +M + + AS + +L+GY +
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG-SLSAIDEGKQLHAQTMKLQYLSKTA 254
             L+++A   F ++ G+ V+PN +  ++++  C  S    DEG Q+H   +K   L    
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V  AL+  Y   G++ +A+ +FE +   NV+SWT+++ G+   G+  + L +   MR++G
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  N+ TF    +SC  L +  +GY     +I+ G      V  +++ M+S    + EA 
Sbjct: 293 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 352

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
                M +    +SWNA I+ +  +    E++  F  M       +  T SS+L  CS +
Sbjct: 353 YVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 411

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L     IH  +VK   +SNV + ++L+  Y++ G  EDAE VF  +T  D++SWNSM+
Sbjct: 412 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 471

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y Q+G+    + +  +++  G    + TF + L+ACS+   + +  K+  +++   G 
Sbjct: 472 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGF 530

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
                  + +V + G+ G +  A   +  +P +P    W  L   
Sbjct: 531 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 254/519 (48%), Gaps = 5/519 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S C   E   LG +    I +        V  SL++M++    ++    V   M   D
Sbjct: 303 VTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECD 362

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N +++ YA + L  ++   F  +  +  + N  T S++L++C S+  +  G+ +H 
Sbjct: 363 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 422

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   S   + N LLT+Y + G  EDAE VF+ + +R++ISW +++  + Q G    
Sbjct: 423 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 482

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+++  + + G   N  TF  ALA+C++        + HA +I  G      VG A+V 
Sbjct: 483 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 542

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY  LG + EAKK L+ M +    V+WNA I G   N++  EA++A+  +       +  
Sbjct: 543 MYGKLGMMMEAKKVLQTMPQ-PDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 601

Query: 423 TYSSILKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T  S+L ACS    L      IH+ IV + FES+ +V +SLI  Y KCG    +  +F  
Sbjct: 602 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 661

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           L     ++WN+M+ A + +G   +A+ +F +M   G+     +F   L+A ++  ++++G
Sbjct: 662 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 721

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           Q++   +V + G   +    +  +D+ G+ G++   L  +   PI  +   W  L +A  
Sbjct: 722 QQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFA 779

Query: 602 CHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGL 639
            H   + A     ++L+L P  D   +V+L +     GL
Sbjct: 780 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGL 818



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 254/527 (48%), Gaps = 14/527 (2%)

Query: 120 VIEVLSYCSREECL-ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           V  +++ CSR   + + G + H  + KT + GD +V  +LV+ Y   G + +   + ++M
Sbjct: 198 VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 257

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  ++ S   L+ GY+ +    +  + + ++    V  N  T++T+ + CG L     G 
Sbjct: 258 PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGY 317

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+    ++  +    +V+N+L++M+     +E+A  VF+ + + ++ISW A+I+ +  HG
Sbjct: 318 QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 377

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + LR    MR    + N  T +  L+ C+S+ N   G   H  V+K G+     +  
Sbjct: 378 LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 437

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++ +YS  G   +A+   + M +    +SWN+ +A + ++ K  + ++  +++++    
Sbjct: 438 TLLTLYSEAGRSEDAELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 496

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +  T++S L ACS    L   + +H+ I+ + F   + VG++L+  Y K G   +A++V
Sbjct: 497 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 556

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH-SGL 537
              +   D V+WN++I  +++N    +A+  ++ +  +GI     T ++VL ACS    L
Sbjct: 557 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 616

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPL 596
           ++ G  +   +V   G   ++   + ++ +  + G L  +      L  K  +PI W  +
Sbjct: 617 LKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK--SPITWNAM 673

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
            AA   H          ++ L++  +   V V L       GL A A
Sbjct: 674 VAANAHHG-------CGEEALKIFGEMRNVGVNLDQFSFSGGLAATA 713



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%)

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           LK  S + S    + +H+  +       +   ++LI  Y+K G+ E A  VF ++   + 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
            SW++M+  Y + G   +A+ LF +M   G+ P      ++++ACS SG + D       
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V + GIL +    + +V   G  G +  A      +P
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 258


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 324/603 (53%), Gaps = 13/603 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H  I K+       V  SLV  Y K   + S   V  +M   D+ S N ++ GY  
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++  S F+++    ++ +  T  ++ A C     I  G+ +H+  +K  +  +   
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N LL MY KCG ++ A++VF  +  R+V+S+T++I G+ + G   + ++L   M E+GI
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ YT T  L  CA  R    G   H  + +  +    FV  A++DMY+  G + EA+ 
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLL 434
              EM +    +SWN  I G+ +N    EA+  F+ ++     + DE T + +L AC+ L
Sbjct: 454 VFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +     +IH  I+++ + S+ HV +SL++ Y KCG+   A  +F  + + D+VSW  MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +G  ++AI LF +M   GI     +F+++L ACSHSGLV +G + F  M  E  I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+C+VD+L R G L  A  FI N+PI P A IW  L   CR H D+K+AE +++
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ EL+P++   YV ++N+YAEA      +  RK +  + + K PGCSWIE+  ++  F 
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
           + + S+ E   +   L+++  ++ + G++           + EKE+ +  HSE+LA+  G
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812

Query: 724 LIS 726
           +IS
Sbjct: 813 IIS 815



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/575 (26%), Positives = 272/575 (47%), Gaps = 30/575 (5%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N V + C S +  +D + +  VL  C+  + L+ G+     I       D  + + L  M
Sbjct: 79  NAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM 138

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y  CGD+K    V  ++        N L+   AK+  F  +   F K+    V+ + YT+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S +     SL ++  G+QLH   +K  +  + +V N+L+  Y+K   ++ A  VF+ + +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+VISW +IING+  +G  EK L +   M   GI+ +  T     A CA  R   +G   
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H+  +K   +  D     ++DMYS  G++  AK   +EM    S VS+ + IAG+ R   
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-SDRSVVSYTSMIAGYAREGL 377

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EA++ F +M     + D +T +++L  C+    L   +++H  I ++    ++ V ++
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRP 520
           L++ Y KCGS ++AE VFS++   D++SWN++I  YS+N  A +A+ LF  ++ E    P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              T   VL AC+       G+++   +++  G   +    + +VD+  + G L +A + 
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHML 556

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
             ++  K     W  + A    H   K A                  + L N   +AG++
Sbjct: 557 FDDIASKDLVS-WTVMIAGYGMHGFGKEA------------------IALFNQMRQAGIE 597

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           AD        ++  +S    CS   + ++ +RFF+
Sbjct: 598 AD--------EISFVSLLYACSHSGLVDEGWRFFN 624


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 193/567 (34%), Positives = 323/567 (56%), Gaps = 6/567 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LGR  H ++ K+    D  V +SLV MYAK    +  V V  +MP  D+AS N +++ + 
Sbjct: 124 LGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFY 183

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +    ++A   F +++  D +PN  + +  ++ C  L  ++ GK++H + +K ++     
Sbjct: 184 QRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEY 243

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V++AL+ MY +C  +E A  VF+ + ++++++W ++I G+   GD +  + L+  M  +G
Sbjct: 244 VNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEG 303

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             P++ T T  L +C+  RN   G   H  VI+  +    ++  +++D+Y   GE+  A+
Sbjct: 304 TRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAE 363

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               +  K     SWN  I+G+       +A++ + QMV      D  T++S+L  CS L
Sbjct: 364 TVFLKTQKDVVE-SWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQL 422

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L   +QIH  I +S+ E++  + S+L++ Y+KCG+ ++A R+F+ +   DVVSW  MI
Sbjct: 423 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMI 482

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY  +G+ R+A+  F++M   G++P   TFLAVLSAC H+GL+ +G K F  M  +YGI
Sbjct: 483 SAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGI 542

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLFAACRCHSDLKMAEFIS 613
                 YSC++D+LGRAG+L  A   +   P  +  A +   LF AC  H D  +   I+
Sbjct: 543 EASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIA 602

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS--KEPGCSWIEVYNKIY 671
           K ++E  PDDA+ Y  L N+YA +G   DA ++ +L KMKE+   K+PGCSWIE+  K+ 
Sbjct: 603 KLLVEKYPDDASTYTVLFNLYA-SGESWDAAKRVRL-KMKEVGMRKKPGCSWIEMNEKVC 660

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            FF++++SH +   VYE L  L   +E
Sbjct: 661 HFFAEDRSHPQAENVYECLALLSGHME 687



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 263/517 (50%), Gaps = 9/517 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+  + L   +  H  I    +  D  +  SL+N+Y  C D  S   V + + 
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 180 YL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEG 237
              D+   N L++GY+KN++F      F +L    +  P+ +TY  ++   G+L     G
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + +H   +K  ++    V+++L+ MY K  + ED+  VF+ + +R+V SW  +I+ F Q 
Sbjct: 126 RMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQR 185

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GD EK L L   M     +PN  + TVA+++C+ L     G   H + +K+   L ++V 
Sbjct: 186 GDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVN 245

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY G  +  E  +++ +  +  S V+WN+ I G+     ++  +E  ++M+    
Sbjct: 246 SALVDMY-GRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGT 304

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
              + T +SIL ACS   +L   + +H  +++S  ++++++  SLI+ Y KCG  + AE 
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAET 364

Query: 478 VFSQLTAADVV-SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           VF + T  DVV SWN MI  Y   G   KA+ ++++MV  G++P   TF +VLS CS   
Sbjct: 365 VFLK-TQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLA 423

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            ++ G+++  S + E  +  +E   S ++D+  + G ++ A    +++P K     W  +
Sbjct: 424 ALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVS-WTVM 481

Query: 597 FAACRCHSDLKMA--EFISKQILELDPDDAAVYVTLS 631
            +A   H   + A   F   Q   + PD       LS
Sbjct: 482 ISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLS 518



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CSR   L  G+  H  + ++ V  D ++  SL+++Y KCG++K    V  +     
Sbjct: 314 ILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDV 373

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++GY     + +A   + ++  + VQP+  T++++L+ C  L+A+++GKQ+H 
Sbjct: 374 VESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHL 433

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              + +  +   + +ALL MY KCG +++A  +F  + +++V+SWT +I+ +  HG   +
Sbjct: 434 SISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPRE 493

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            L     M++ G+ P+  TF   L++C  A L +  + Y F     K G+       + +
Sbjct: 494 ALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKY-FSQMRSKYGIEASIEQYSCL 552

Query: 361 VDMYSGLGEIWEAKKQLKE 379
           +D+    G + EA   L++
Sbjct: 553 IDILGRAGRLLEAYGILQQ 571


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 179/528 (33%), Positives = 301/528 (57%), Gaps = 13/528 (2%)

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           ++ P    Y +++  C     +   + +H+   + +      + N+L+ MY KCG + DA
Sbjct: 57  ELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDA 116

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+G+  R+V+SWT +I G+ Q+    + L L+  M      P+ +TFT  L +  + 
Sbjct: 117 RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGAC 176

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G   HA  +K  +    +VG+A++DMY+   ++  A +    +  S + VSWNA 
Sbjct: 177 GGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWL-DSKNEVSWNAL 235

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAGF R    E  +  F++M RN      FTYSS+  A + + +L     +H+ ++KS  
Sbjct: 236 IAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQ 295

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           +    V ++++  Y K GS  DA +VF ++   D+V+WN+M+ A++Q G  ++A+  FE+
Sbjct: 296 KLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEE 355

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           +   GI+    TFL+VL+ACSH GLV++G++ F+ M+K+Y + PE  HY   VDLLGRAG
Sbjct: 356 IRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLGRAG 414

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
            L+ ALIF+  +P++PTA +W  L  ACR H + K+ ++ +  + ELDP+D    V L N
Sbjct: 415 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYN 474

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           +YA  G   DA   RK+MK   + KEP CSW+E+ N ++ F + + +H +  ++Y   ++
Sbjct: 475 IYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEE 534

Query: 693 LMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPA 729
           +  +I+  G+  N           E+E ++ YHSE++A+ F LI++PA
Sbjct: 535 VNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPA 582



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 212/467 (45%), Gaps = 48/467 (10%)

Query: 90  SFPDGFIDDGCSNTVPVTCYSLESLLDKQFVI------EVLSYCSREECLELGRRYHALI 143
           SFP G     CS++       L+ LL  +          +++ C++ + L   R  H+ +
Sbjct: 32  SFPSG---PACSSSSSSGLRELDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHL 88

Query: 144 TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
           +++ + GD F+  SL++MY KCG +     V   +P  D+ S   L+ GYA+N +  +A 
Sbjct: 89  SRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEAL 148

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
                +     +P+ +T+++ L   G+      G+Q+HA  +K        V +ALL MY
Sbjct: 149 GLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMY 208

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            +C  M+ A  VF+ L  +N +SW A+I GF + GD E  L     M+ +G     +T++
Sbjct: 209 ARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYS 268

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
              ++ A +     G   HA +IK G  L  FV   I+ MY+  G + +A+K    + + 
Sbjct: 269 SVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQR 328

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              V+WN  +  F +    +EA+  F ++ +     ++ T+ S+L ACS           
Sbjct: 329 -DLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACS----------- 376

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  +VK   E   +    +++ YN                  ++  + S +    + G  
Sbjct: 377 HGGLVK---EGKQYF--DMMKDYN---------------VEPEIDHYVSFVDLLGRAGLL 416

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ----KVFE 546
           ++A+I   KM +E   PT + + A+L AC      + GQ     VFE
Sbjct: 417 KEALIFVFKMPME---PTAAVWGALLGACRMHKNAKIGQYAADHVFE 460


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 216/693 (31%), Positives = 363/693 (52%), Gaps = 35/693 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A ++F+  P R  +S + +I          G S NG+S              C + +  
Sbjct: 84  AAVKVFHYMPVRNLVSWNSII---------SGFSENGFSKD------------CFDMLVE 122

Query: 107 TCYSLESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
                E LL D   ++ VL  C+RE  +++G R H L  K  +  D  V  SLV+MY+KC
Sbjct: 123 MMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKC 182

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTM 224
           G +     +  +    +  S N ++ G        +AF+ F ++    D++ N  T   +
Sbjct: 183 GYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNI 242

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L  C  +S +   K+LH  +++  +     V+N  +  Y KCGM+  AE VF  +  + V
Sbjct: 243 LPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
            SW A+I G  Q+GD  K L L   M   G+ P+ +T    L + A L++   G   H  
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGF 362

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V++ G+ +  F+G +++ +Y   GE   A+     M +  SSVSWNA I+G+ +N   E+
Sbjct: 363 VLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGM-EEKSSVSWNAMISGYSQNGLPED 421

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+  F ++V +     +    S+L ACS   +L   ++ H   +K+    +V V  S I+
Sbjct: 422 ALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTID 481

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y K G  +++  VF  L   D+ SWN++I AY  +G   ++I LFE+M   G  P   T
Sbjct: 482 MYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFT 541

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+ +L+ CSH+GLV++G K F  M   +GI P+  HY+C++D+LGRAG+L+ AL  +  +
Sbjct: 542 FIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEM 601

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P +P + +W  L + CR   +L++ + +++++LEL+P +   YV+LSN+YA +G   D  
Sbjct: 602 PEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVR 661

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK---SHSEMPKVYEKLKQLMQQIEDIG 701
             R+++K   + K+ GCSWIE+  K++ F + +       EM   + KL++ M +I    
Sbjct: 662 RVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKP 721

Query: 702 HT-------DNEKE-DRVLYHSERLAVGFGLIS 726
           +T       D EK+ +++  HSE+LA+ FGL++
Sbjct: 722 NTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLN 754



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 233/487 (47%), Gaps = 8/487 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+      LG   H ++ K  +  D FV  +L+ MY K G + + V V   MP  +
Sbjct: 37  VIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRN 96

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGID--VQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + S N +++G+++N      F   +++   +  + P+  T  T+L +C     +  G ++
Sbjct: 97  LVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRI 156

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +KL       V+N+L+ MY KCG + +A+ +F+   ++N +SW  +I G    G  
Sbjct: 157 HGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYI 216

Query: 301 EKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            +   L   M+ ++ I+ NE T    L +C  +         H   I+ G    + V   
Sbjct: 217 FEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANG 276

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
            V  Y+  G +  A++    M ++ +  SWNA I G  +N    +A+  + QM  +    
Sbjct: 277 FVAAYAKCGMLICAERVFYSM-ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVP 335

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D FT  S+L A + L SL   +++H  +++   E +  +G SL+  Y  CG    A  +F
Sbjct: 336 DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF 395

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +     VSWN+MI  YSQNG    A+ILF K+V +G +P++   ++VL ACS    ++
Sbjct: 396 DGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALR 455

Query: 540 DGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            G++     +K   +L E+   +C  +D+  ++G ++ +      L  K  A  W  + A
Sbjct: 456 LGKETHCYALK--ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLAS-WNAIIA 512

Query: 599 ACRCHSD 605
           A   H D
Sbjct: 513 AYGVHGD 519



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 251/541 (46%), Gaps = 52/541 (9%)

Query: 195 KNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSK 252
           +N L+  A   F+KL    +   +++T+  ++  C GSL     G+ +H   +K+  L  
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDR-GLGEVIHGMVIKMGLLLD 65

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR- 311
             V NAL+ MY K G ++ A  VF  +  RN++SW +II+GF ++G  +    ++  M  
Sbjct: 66  VFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMA 125

Query: 312 -EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            E+G+ P+  T    L  CA   +  MG   H   +K G++    V  ++VDMYS  G +
Sbjct: 126 GEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYL 185

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILK 429
            EA + L +     ++VSWN  I G        EA   F +M ++ D   +E T  +IL 
Sbjct: 186 TEA-QMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC  +  L + +++H   ++  F+ +  V +  + AY KCG    AERVF  +    V S
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I   +QNG  RKA+ L+ +M   G+ P   T  ++L A +H   ++ G++V    V
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV-HGFV 363

Query: 550 KEYGI-----------------------------LPEEA--HYSCMVDLLGRAGKLEIAL 578
             +G+                             + E++   ++ M+    + G  E AL
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 579 IFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE-LDPDDAAVYVTLSNMY 634
           I    L     +P+      +  AC   S L++ +      L+ L  +D  V  +  +MY
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           A++G   ++      +K K+++     SW    N I   +  +    E  +++E+++++ 
Sbjct: 484 AKSGCIKESRSVFDGLKNKDLA-----SW----NAIIAAYGVHGDGEESIELFERMRKVG 534

Query: 695 Q 695
           Q
Sbjct: 535 Q 535


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/573 (33%), Positives = 311/573 (54%), Gaps = 3/573 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS  +    G+++H  + K     +  V  SL+ MY +         V   M   D
Sbjct: 47  ILQACSSPDYRIFGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKD 106

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N ++  YA+    ++A   F+ +    +QPN YT++ +++ C     I+EG+Q   
Sbjct: 107 VRCFNFMILEYARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLG 166

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            + K  +L++T++ NA++ MY K GM  +AE +F  +  RN+ISWTA+I+G+ + GD +K
Sbjct: 167 LSFKYGFLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKK 226

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +     +   G++ +    T  L  C+  RN  +G   H  VIK G A    +GTA+VD
Sbjct: 227 AVDTFMELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVD 286

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT--EEAIEAFSQMVRNDAACD 420
           +Y+  G +  A+     +  S    S+NA +AGF  N +   E+ I  F+    +    D
Sbjct: 287 LYAKCGNLMSARMVFDGL-SSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPD 345

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T+S +L   +   +L      H+  +K+ FE+++ V +++I  Y KCGS E+A R+F+
Sbjct: 346 MVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFN 405

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   D +SWN+MI AY+ +G+  K ++LFE+M+ +   P   T L++L AC++SGL +D
Sbjct: 406 VMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRD 465

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G  +F  M  +YGI P   HY+CMVDLLGRAG L  A+  I+  P   +  +WR L   C
Sbjct: 466 GISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVC 525

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           +   D    +  SK +LEL P +A  Y+ +SNMYA   +  +A + R +M   ++SKE G
Sbjct: 526 KLCGDRNFGKLASKYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAG 585

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            SWIE+ +K++ F +  K H E  ++Y +L  L
Sbjct: 586 TSWIEIDDKVHHFVASGKDHPESNEIYAELDLL 618



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 207/449 (46%), Gaps = 13/449 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           L+ GY  +  F+ A +   ++       N +T S +L  C S      G+Q H   +K  
Sbjct: 12  LIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQFHCFVIKCG 71

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           +     V  +L+ MY +  +  DAE VF+ +  ++V  +  +I  + + G+ EK +R+  
Sbjct: 72  FDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKAIRVFI 131

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G+ PN+YTFT  +++C        G  F     K G      +G AI++MY   G
Sbjct: 132 NMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKG 191

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
              EA++    M    + +SW A I+G+ R+   ++A++ F ++       D    ++IL
Sbjct: 192 MAREAERMFSAM-TDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTIL 250

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             CS   +L    QIH  ++K  +   V++G++L++ Y KCG+   A  VF  L++  + 
Sbjct: 251 DGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIA 310

Query: 489 SWNSMIKAYSQNGR--ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           S+N+++  + +N R      I+LF    ++GI+P   TF  +LS  ++   +  G + + 
Sbjct: 311 SFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRG-RCYH 369

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD- 605
           +   + G   + +  + ++ +  + G +E A     N+     +  W  + +A   H   
Sbjct: 370 AYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMF-NVMNDHDSISWNAMISAYALHGQG 428

Query: 606 ----LKMAEFISKQILELDPDDAAVYVTL 630
               L   E I K   E  PD+  +   L
Sbjct: 429 AKVLLLFEEMIKK---EFAPDEITILSIL 454



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 151/312 (48%), Gaps = 2/312 (0%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           ++ RN I+WT++I G+    ++E  L +   M + G   NE+T +V L +C+S      G
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
             FH  VIK G      VGT+++ MY+      +A+K    M        +N  I  + R
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMA-CKDVRCFNFMILEYAR 119

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               E+AI  F  M+      +++T+++I+ AC     +   EQ      K  F +   +
Sbjct: 120 AGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSI 179

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           G+++I  Y K G   +AER+FS +T  +++SW ++I  Y+++G  +KA+  F ++ + G+
Sbjct: 180 GNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGV 239

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
              +S    +L  CS    ++ G ++   +V + G        + +VDL  + G L  A 
Sbjct: 240 NFDSSLLTTILDGCSECRNLELGLQI-HGLVIKLGYACAVNIGTALVDLYAKCGNLMSAR 298

Query: 579 IFISNLPIKPTA 590
           +    L  K  A
Sbjct: 299 MVFDGLSSKRIA 310



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 116/220 (52%), Gaps = 8/220 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D   +  +L  CS    LELG + H L+ K        +  +LV++YAKCG++ S   V
Sbjct: 241 FDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMV 300

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQA-----FSFFLKLDGIDVQPNHYTYSTMLAICG 229
              +    IAS N +LAG+ +N+   +      F+ F +LDGI  +P+  T+S +L++  
Sbjct: 301 FDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHF-RLDGI--KPDMVTFSRLLSLSA 357

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           + S +  G+  HA  +K  + +  +V+NA++TMY KCG +E+A  +F  +   + ISW A
Sbjct: 358 NHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNA 417

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +I+ +  HG   K L L   M +    P+E T    L +C
Sbjct: 418 MISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQAC 457


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/629 (31%), Positives = 333/629 (52%), Gaps = 12/629 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  GR  HA +    +  +     +L NMYAKC        V  +MP  D
Sbjct: 65  LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGKQLH 241
             + N L+AGYA+N L   A    +++   + + P+  T  ++L  C +  A+   ++ H
Sbjct: 125 RVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAH 184

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  ++        V+ A+L  Y KCG +  A  VF+ +  +N +SW A+I+G+ Q+GD  
Sbjct: 185 AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSR 244

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M E+G+D  + +   AL +C  L     G   H  +++ G+     V  A++
Sbjct: 245 EALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALI 304

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS    +  A     E+ +  + VSWNA I G  +N  +E+A+  F++M   +   D 
Sbjct: 305 TMYSKCKRVDLASHVFDELDRR-TQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDS 363

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT  S++ A + +        IH   ++   + +V+V ++LI+ Y KCG    A  +F+ 
Sbjct: 364 FTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNS 423

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
                V++WN+MI  Y  +G  + A+ LFE+M   GI P  +TFL+VLSACSH+GLV +G
Sbjct: 424 ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           ++ F SM ++YG+ P   HY  MVDLLGRAGKL+ A  FI  +P+ P   ++  +  AC+
Sbjct: 484 REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACK 543

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++AE  +++I EL P +   +V L+N+YA A +  D    R  M+   + K PG 
Sbjct: 544 LHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGW 603

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRV 711
           S I++ N+I+ F+S + +H +  ++Y +L +L+++I+ +G+           D+ K   +
Sbjct: 604 SIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDVKAQLL 663

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
             HSE+LA+ FGLI        +  + L 
Sbjct: 664 NTHSEKLAIAFGLIRTAPGTTIQIKKNLR 692



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 195/387 (50%), Gaps = 11/387 (2%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A + F+ +      P   T++++L +C +   +  G+ +HAQ       S+   + AL  
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEY 320
           MY KC    DA  VF+ +  R+ ++W A++ G+ ++G     + +V  M+ E+G  P+  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L +CA+ R        HA  I+ G+     V TAI+D Y   G+I  A+     M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
             + +SVSWNA I G+ +N  + EA+  F++MV       + +  + L+AC  L  L   
Sbjct: 223 -PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            ++H  +V+   +SNV V ++LI  Y+KC   + A  VF +L     VSWN+MI   +QN
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI---LPE 557
           G +  A+ LF +M +E ++P + T ++V+ A     L      +    +  Y I   L +
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQ 396

Query: 558 EAH-YSCMVDLLGRAGKLEIALIFISN 583
           + +  + ++D+  + G++ IA I  ++
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNS 423



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 158/328 (48%), Gaps = 8/328 (2%)

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           D    L     M   G  P   TFT  L  CA+  +   G   HAQ+  RG+       T
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+ +MY+      +A++    M      V+WNA +AG+ RN     A+E   +M   +  
Sbjct: 99  ALANMYAKCRRPADARRVFDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGE 157

Query: 419 -CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S+L AC+   +LA C + H+  ++S  E  V+V +++++AY KCG    A  
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  +   + VSWN+MI  Y+QNG +R+A+ LF +MV EG+  T+ + LA L AC   G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           + +G +V E +V+  G+    +  + ++ +  +  ++++A      L  + T   W  + 
Sbjct: 278 LDEGMRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELD-RRTQVSWNAMI 335

Query: 598 AACR---CHSDLKMAEFISKQILELDPD 622
             C    C  D  +  F   Q+  + PD
Sbjct: 336 LGCAQNGCSED-AVRLFTRMQLENVKPD 362


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/570 (33%), Positives = 318/570 (55%), Gaps = 3/570 (0%)

Query: 140 HALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HAL  K  +   + +V  SL+NMY K G +     +   MP  +  S + ++AGYA    
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199

Query: 199 FDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
            ++AF  F L L+    + + +  + +L+       +  G+Q+H   +K   L   +V N
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+TMY K G M  A  VFE   +RN I+W+A+I G+ Q+G+ +  + +   M   G  P
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            E+TF   L + + L    +G   H  ++K G  +  +V +A+VDMY+  G I +AK+  
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++      V W A ++G  +N + EEA+  +++M +      + T +S L+AC+ + +L
Sbjct: 380 DQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAAL 438

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q+H++IVK        VGS+L   Y+KCG+ ED   VF ++   DV++WNS+I  +
Sbjct: 439 EPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGF 498

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           SQNG    A+ LFE+M +EG  P N TF+ +L ACSH GLV  G + F  M K+YG+ P 
Sbjct: 499 SQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPR 558

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CMVD+L RAG L+ A  FI ++ I     +WR +  ACR   D  +  +  ++++
Sbjct: 559 LDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLM 618

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL   D++ Y+ LSN+YA      D E  R LM+++ ++K+PGCSW+E+ ++++ F    
Sbjct: 619 ELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGE 678

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           + H E   +  +L++L + ++D G+  + K
Sbjct: 679 QQHPEAENINAQLRRLAKHMKDEGYHSSSK 708



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 231/476 (48%), Gaps = 15/476 (3%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD--IKSMVAVV 175
           QF IE+L    R  C   G   HA   K+       V  SL+N Y+      + +  AV 
Sbjct: 16  QF-IELLR--RRASCPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVF 72

Query: 176 KQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             +P    D+AS N LL   +++   D    F   L    V P+ ++++         ++
Sbjct: 73  DDIPPAARDVASWNSLLNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAAS 132

Query: 234 IDEGKQLHAQTMKL-QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
              G   HA   K+   +S   V  +LL MY K G++ DA  +F+G+ QRN  SW+ ++ 
Sbjct: 133 APAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVA 192

Query: 293 GFKQHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           G+      E+   L  LM E+   + +E+  T  L++ +      MG   H  ++K G+ 
Sbjct: 193 GYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLL 252

Query: 352 LGDFVGT--AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
             DFV    ++V MY+  G +  A   + E  +  +S++W+A I G+ +N + + A+  F
Sbjct: 253 --DFVSVENSLVTMYAKAGCM-GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMF 309

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           SQM        EFT+  +L A S L +LA  +Q H  +VK  FE  ++V S+L++ Y KC
Sbjct: 310 SQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKC 369

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G   DA+  F QL   D+V W +M+  + QNG   +A+ L+ +M  EGI P+ ST  + L
Sbjct: 370 GCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGL 429

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            AC+    ++ G+++   +VK YG+       S +  +  + G LE  +     +P
Sbjct: 430 RACAGIAALEPGKQLHTQIVK-YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIP 484



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 1/310 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS  S    L +G + H LI K  +     V  SLV MYAK G + +   V +     +
Sbjct: 226 VLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERN 285

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + + ++ GYA+N   D A S F ++      P  +T+  +L     L A+  GKQ H 
Sbjct: 286 SITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHG 345

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL +  +  V +AL+ MY KCG + DA+  F+ L + +++ WTA+++G  Q+G++E+
Sbjct: 346 LMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEE 405

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M ++GI P++ T    L +CA +     G   H Q++K G+ LG  VG+A+  
Sbjct: 406 ALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALST 465

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS  G + +     + +      ++WN+ I+GF +N     A++ F +M       D  
Sbjct: 466 MYSKCGNLEDGMSVFRRI-PDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNI 524

Query: 423 TYSSILKACS 432
           T+ +IL ACS
Sbjct: 525 TFINILCACS 534



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL+  S    L +G++ H L+ K       +V ++LV+MYAKCG I        Q+  
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 384

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           +DI     +++G+ +N   ++A + + ++D   + P+  T ++ L  C  ++A++ GKQL
Sbjct: 385 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 444

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q +K        V +AL TMY KCG +ED  SVF  +  R+VI+W +II+GF Q+G  
Sbjct: 445 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 504

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-----MALGDF 355
              L L   M+ +G  P+  TF   L +C     SHMG      ++ RG     +   D+
Sbjct: 505 NGALDLFEEMKMEGTIPDNITFINILCAC-----SHMG------LVDRGWEYFSLMTKDY 553

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKE 379
             T  +D Y+ + +I      LKE
Sbjct: 554 GLTPRLDHYACMVDILSRAGMLKE 577



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 90/187 (48%), Gaps = 2/187 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K  +   L  C+    LE G++ H  I K  +     V ++L  MY+KCG+++  ++V +
Sbjct: 422 KSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFR 481

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P  D+ + N +++G+++N   + A   F ++      P++ T+  +L  C  +  +D 
Sbjct: 482 RIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDR 541

Query: 237 GKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
           G +  +   K   L+      A ++ +  + GM+++A+   E + +      W  ++   
Sbjct: 542 GWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGAC 601

Query: 295 KQHGDYE 301
           +   D++
Sbjct: 602 RSLRDFD 608


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 316/582 (54%), Gaps = 24/582 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +E+L  C    CL   R+ HA   K     D+ V  ++V++YAK   +         +P 
Sbjct: 249 LELLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPN 308

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + +CN ++ G  +  L  +A   F  +    +     + S + + C  +   D     
Sbjct: 309 HTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKGFD----- 363

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                         V NA+L +Y KC  + +A  VF+ + QR+ +SW  II   +Q+  Y
Sbjct: 364 ----------VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECY 413

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E  +  +  M   G++ +++T+   L +CA L++   G + H + IK G+ L  FV + +
Sbjct: 414 EDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 473

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY   G I EA K    +G     VSWN+ IAGF  N+++EEA + FS+M+      D
Sbjct: 474 VDMYCKCGMITEALKLHDRIGGQ-ELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPD 532

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            FTY+++L +C+ L ++   +QIH +I+K +   +  + S+L++ Y KCG+  D++ +F 
Sbjct: 533 HFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFE 592

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D VSWN+MI  Y+ +G+  +A+ +FE+     + P ++TF+AVL ACSH GL+ D
Sbjct: 593 KVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDD 652

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G + F  M   Y + P+  H++CM       G  E AL FI ++P++  A IW+ L + C
Sbjct: 653 GCRYFHLMTSRYKLEPQLEHFACM-------GPQE-ALKFIRSMPLEADAVIWKTLLSIC 704

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           +   D+++AE  +  +L LDPDD++VY+ LSN+YAE+G   D    R+LM+   + KEPG
Sbjct: 705 KIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 764

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           CSWIEV ++++ F    K H    +VYE L  L+ +++  G+
Sbjct: 765 CSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSGY 806



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 221/459 (48%), Gaps = 36/459 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +L  C   + L LG + HAL  KT +  D    ++LV+MY KC  ++  +   
Sbjct: 162 DRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFF 221

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   +  S   ++AG  +N  + +      +                   C +++ + 
Sbjct: 222 HGMGERNSVSWGAVIAGCVQNEQYMRGLELLCR-------------------CKAITCLS 262

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             +QLHA  +K ++ S   V  A++ +Y K   + DA   F GL    V +  A++ G  
Sbjct: 263 TARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLV 322

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   + ++L   M   GI     + +   ++CA ++       F   V  R       
Sbjct: 323 RTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG------FDVDVCVR------- 369

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              AI+D+Y     + EA    +EM +   SVSWN  IA   +N+  E+ I   ++M+R+
Sbjct: 370 --NAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRS 426

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+FTY S+LKAC+ L SL     +H + +KS    +  V S++++ Y KCG   +A
Sbjct: 427 GMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 486

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++  ++   ++VSWNS+I  +S N ++ +A   F +M+  G++P + T+  VL +C++ 
Sbjct: 487 LKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANL 546

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             ++ G+++   ++K+  +L +E   S +VD+  + G +
Sbjct: 547 ATIELGKQIHGQIIKQE-MLGDEFISSTLVDMYAKCGNM 584



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 231/542 (42%), Gaps = 76/542 (14%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  YA  GD     +++  MP  D+ S N LL+GY +  +F       +++    V P
Sbjct: 102 TMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAP 161

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T + +L  CG L  +  G Q+HA  +K          +AL+ MY KC  +EDA   F
Sbjct: 162 DRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFF 221

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW A+I G  Q+  Y + L L+C                    C ++    
Sbjct: 222 HGMGERNSVSWGAVIAGCVQNEQYMRGLELLC-------------------RCKAITCLS 262

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-SWNAQIAG 395
                HA  IK   +    VGTAIVD+Y+    + +A++     G    +V + NA + G
Sbjct: 263 TARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAF--FGLPNHTVETCNAMMVG 320

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             R     EA++ F  M R+       + S +  AC+ +                 F+ +
Sbjct: 321 LVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVKG---------------FDVD 365

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V V +++++ Y KC +  +A  VF ++   D VSWN++I A  QN      I+   +M+ 
Sbjct: 366 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLR 425

Query: 516 EGIRPTNSTFLAVLSACS-----HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            G+   + T+ +VL AC+       GLV  G+ +   +  +  +        C   ++  
Sbjct: 426 SGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITE 485

Query: 571 AGKL-------------------------EIALIFIS---NLPIKPTAPIWRPLFAACRC 602
           A KL                         E A  F S   ++ +KP    +  +  +C  
Sbjct: 486 ALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCAN 545

Query: 603 HSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +++ + I  QI++ +   D  +  TL +MYA+ G   D++     +  +++ K    
Sbjct: 546 LATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQ-----LMFEKVQKLDFV 600

Query: 662 SW 663
           SW
Sbjct: 601 SW 602



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 156/347 (44%), Gaps = 53/347 (15%)

Query: 220 TYSTMLAICGSL--SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           T+S +  +C S   SA+  G+  HA+ +   ++    VSN LL MY +CG    A  VF+
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 278 GLVQRN-------------------------------VISWTAIINGFKQHGDYEKPLRL 306
            +  R+                               V+SW A+++G+ Q G +   + L
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G+ P+  T  V L +C  L +  +G   HA  +K G+ +    G+A+VDMY  
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGK 210

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
              + +A      MG+  +SVSW A IAG  +N++    +E                   
Sbjct: 211 CRSLEDALHFFHGMGER-NSVSWGAVIAGCVQNEQYMRGLE------------------- 250

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C  +  L+T  Q+H+  +K+KF S+  VG+++++ Y K  S  DA R F  L    
Sbjct: 251 LLCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHT 310

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           V + N+M+    + G   +A+ LF+ M   GI     +   V SAC+
Sbjct: 311 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACA 357



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 35/211 (16%)

Query: 423 TYSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           T+S + + C+     +LAT +  H+R++ S F   + V + L++ Y +CG    A  VF 
Sbjct: 31  TFSHVYQLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFD 90

Query: 481 QLTAADVVSWNSMIKAYS-------------------------------QNGRARKAIIL 509
            +   D VSWN+M+ AY+                               Q G  R  + L
Sbjct: 91  TMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDLVGL 150

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
             +M   G+ P  +T   +L AC     +  G ++    VK  G+  +    S +VD+ G
Sbjct: 151 SIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKT-GLEMDVRAGSALVDMYG 209

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           +   LE AL F   +  + +   W  + A C
Sbjct: 210 KCRSLEDALHFFHGMGERNSVS-WGAVIAGC 239


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/625 (32%), Positives = 330/625 (52%), Gaps = 13/625 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++S C+  +    G   H+L  ++++     V  +LVNMY+  G +     + 
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S N +++ Y +N     A     +L   +  PNH T+S+ L  C S  A+ 
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK +HA  ++L       V N+L+TMY KC  MEDAE VF+ +   +++S+  +I G+ 
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMALGD 354
              D  K +++   MR  GI PN  T      S AS  + H  G   HA +I+ G    +
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 484

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V  +++ MY+  G + E+   +     + + VSWNA IA   +    EEA++ F  M  
Sbjct: 485 YVANSLITMYAKCGNL-ESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH 543

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D    +  L +C+ L SL    Q+H   +KS  +S+ +V ++ ++ Y KCG  ++
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 603

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
             +V           WN++I  Y++ G  ++A   F++MV  G +P   TF+A+LSACSH
Sbjct: 604 MLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSH 663

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV  G   + SM   +G+ P   H  C+VDLLGR G+   A  FI  +P+ P   IWR
Sbjct: 664 AGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWR 723

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L ++ R H +L++    +K++LELDP D + YV LSN+YA     AD ++ R  MK   
Sbjct: 724 SLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTIN 783

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TD 704
           I+K P CSW+++ N++  F   ++ H    K+Y KL +++ ++ ++G+          TD
Sbjct: 784 INKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTD 843

Query: 705 NEKEDRVLY-HSERLAVGFGLISLP 728
            E++++ L+ HSE+LA+ +GLI +P
Sbjct: 844 EEQKEQNLWNHSEKLALAYGLIVVP 868



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 248/498 (49%), Gaps = 12/498 (2%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP++ ++L SL      +       R+E +  G   HAL  +  + G+ ++  +L+++Y 
Sbjct: 37  VPLSGFALASL------VTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYG 90

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTY 221
             G +     +  +MP  ++ S   L+   + N   ++A   +  ++ DG+    N   +
Sbjct: 91  SRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNAN--AF 148

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +T++++CGSL     G Q+ +Q +     ++ +V+N+L+TM+   G + DAE +F+ + +
Sbjct: 149 ATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEE 208

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            + ISW A+I+ +   G   K   +   MR  G+ P+  T    ++ CAS  +   G   
Sbjct: 209 HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGI 268

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H+  ++  +     V  A+V+MYS  G++ +A+     M +    +SWN  I+ + +N  
Sbjct: 269 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR-DLISWNTMISSYVQNCN 327

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           + +A++   Q+   + + +  T+SS L ACS   +L   + +H+ +++   + N+ VG+S
Sbjct: 328 STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNS 387

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y KC S EDAE+VF  +   D+VS+N +I  Y+      KA+ +F  M   GI+P 
Sbjct: 388 LITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 447

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T + +  + + S  + +  +   + +   G L +E   + ++ +  + G LE +    
Sbjct: 448 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIF 507

Query: 582 SNLPIKPTAPIWRPLFAA 599
           +++  K     W  + AA
Sbjct: 508 NSITNKNIVS-WNAIIAA 524



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+  + E LS C+    LE G + H L  K+ +  D +V  + ++MY KCG +  M+ V
Sbjct: 548 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 607

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           V           N L++GYAK   F +A   F ++     +P++ T+  +L+ C     +
Sbjct: 608 VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 667

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           D+G   +  +M   +     + +   ++ +  + G   +AE   E + V  N + W +++
Sbjct: 668 DKGIDYY-NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLL 726

Query: 292 NGFKQHGDYE 301
           +  + H + E
Sbjct: 727 SSSRTHKNLE 736


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/578 (33%), Positives = 323/578 (55%), Gaps = 3/578 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS+ E    GR+ H  + K  +  D +V  SL++MY+KCG +     V   +    +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N ++A YA+N     A   F  +    V P+ +T S +++ C  L   + GK +HA+
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             K    S + + +ALLT+Y KCG   DA  VF+ + ++++++W ++I+G  ++G +++ 
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458

Query: 304 LRLVCLMRED--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           L++   M++D   + P+    T    +CA L     G   H  +IK G+ L  FVG++++
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D+YS  G    A K    M  + + V+WN+ I+ + RN   E +I+ F+ M+      D 
Sbjct: 519 DLYSKCGLPEMALKVFTSM-STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            + +S+L A S   SL   + +H   ++    S+ H+ ++LI+ Y KCG  + AE +F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +    +++WN MI  Y  +G    A+ LF++M   G  P + TFL+++SAC+HSG V++G
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           + +FE M ++YGI P   HY+ MVDLLGRAG LE A  FI  +PI+  + IW  L +A R
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++    ++++L ++P+  + YV L N+Y EAGL+ +A +   LMK K + K+PGC
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIEV ++   FFS   S     +++  L +L   + D
Sbjct: 818 SWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 150/583 (25%), Positives = 274/583 (46%), Gaps = 37/583 (6%)

Query: 13  TSSFTFPY-----PVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLI 67
           TS FTFP        +  +   K  H   V +   +  + A  L N   K   L  +  +
Sbjct: 58  TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117

Query: 68  FNGYMNIEEKGISRNGYSTRNDSFPDGFIDD-----------GCSNTVPVTCYSLESLLD 116
           F+G+        S++G S R+ +  +  ID            GC   + V     ++   
Sbjct: 118 FDGWSQ------SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAF-S 170

Query: 117 KQFVIEVL---SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMV 172
              V+ V+       REE    G++ H  + + ++  D F+  +L++MY K G  I +  
Sbjct: 171 LSIVVSVMCKEGNFRREE----GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWR 226

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
             V+     ++   N ++ G+  + + + +   ++      V+    +++  L  C    
Sbjct: 227 VFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               G+Q+H   +K+   +   V  +LL+MY KCGM+ +AE+VF  +V + +  W A++ 
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 346

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + ++      L L   MR+  + P+ +T +  ++ C+ L   + G   HA++ KR +  
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              + +A++ +YS  G   +A    K M +    V+W + I+G  +N K +EA++ F  M
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465

Query: 413 VRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
             +D +   D    +S+  AC+ L +L    Q+H  ++K+    NV VGSSLI+ Y+KCG
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             E A +VF+ ++  ++V+WNSMI  YS+N     +I LF  M+ +GI P + +  +VL 
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAG 572
           A S +  +  G K         GI P + H  + ++D+  + G
Sbjct: 586 AISSTASLLKG-KSLHGYTLRLGI-PSDTHLKNALIDMYVKCG 626



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 10/382 (2%)

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGK 238
           Y+  AS N  +    +   + QA   + K DG      + +T+ ++L  C +L+ +  GK
Sbjct: 21  YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-------RNVISWTAII 291
            +H   + L +     ++ +L+ MY+KCG ++ A  VF+G  Q       R+V  W ++I
Sbjct: 81  TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN--SHMGYMFHAQVIKRG 349
           +G+ +   +++ +     M   G+ P+ ++ ++ ++      N     G   H  +++  
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +    F+ TA++DMY   G   +A +   E+   ++ V WN  I GF  +   E +++ +
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
                N       +++  L ACS   +     QIH  +VK    ++ +V +SL+  Y+KC
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G   +AE VFS +    +  WN+M+ AY++N     A+ LF  M  + + P + T   V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380

Query: 530 SACSHSGLVQDGQKVFESMVKE 551
           S CS  GL   G+ V   + K 
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKR 402



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 152/311 (48%), Gaps = 23/311 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V + C+  E L  G + H  + KT +  + FV +SL+++Y+KCG  +  + V 
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF 534

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   ++ + N +++ Y++N L + +   F  +    + P+  + +++L    S +++ 
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK LH  T++L   S T + NAL+ MY+KCG  + AE++F+ +  +++I+W  +I G+ 
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            HGD    L L   M++ G  P++ TF   +++C            H+  ++ G  + +F
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACN-----------HSGFVEEGKNIFEF 703

Query: 356 VG------------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           +               +VD+    G + EA   +K M   A S  W   ++    +   E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763

Query: 404 EAIEAFSQMVR 414
             I +  +++R
Sbjct: 764 LGILSAEKLLR 774


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 205/636 (32%), Positives = 339/636 (53%), Gaps = 13/636 (2%)

Query: 117  KQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
             QFV+  VL      + L L    HA   K     + FV ++L++ Y+ CG +     V 
Sbjct: 530  NQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVF 589

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
              +   D  +   +++ Y++N   +     F K+     + N +  +++L     LS++ 
Sbjct: 590  DGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVV 649

Query: 236  EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             GK +HA ++K  Y ++  V  ALL MY KCG +EDA   FE +   +VI W+ +I+ + 
Sbjct: 650  LGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYA 709

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            Q    E+   L   M    + PNE++ +  L +CA++    +G   H   IK G     F
Sbjct: 710  QCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELF 769

Query: 356  VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            VG A++D+Y+   ++ E+  ++    +  + VSWN  I G+ ++   E A+  F +M   
Sbjct: 770  VGNALIDLYAKCSDM-ESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAA 828

Query: 416  DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                 + TYSS+L+AC+   S+    Q+H  I KS F S+  V +SLI++Y KCG   DA
Sbjct: 829  SVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDA 888

Query: 476  ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
              +F  L   D+VSWN++I  Y+ +G+A  A  LF+ M    I+  + TF+A+LS C  +
Sbjct: 889  REIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGST 948

Query: 536  GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            GLV  G  +F+SM  ++GI P   HY+C+V LLGRAG+L  AL FI ++P  P+A +WR 
Sbjct: 949  GLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRA 1008

Query: 596  LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            L ++C  H ++++  F ++++LE++P D   YV LSNMY+ AG        RK M+   +
Sbjct: 1009 LLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGV 1068

Query: 656  SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL---------MQQIEDIGHT-DN 705
             KEPG SW+E+  +++ F   ++ H  M  +   L+ L         +   +++ H  + 
Sbjct: 1069 RKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEE 1128

Query: 706  EKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
            E++ R+L+ HSERLA+ +GL+  P  +     + L 
Sbjct: 1129 EQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLR 1164



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 211/411 (51%), Gaps = 3/411 (0%)

Query: 136 GRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           GR  H  + ++      D F    L+NMY K G   S   V   +P  ++ S   L+ G+
Sbjct: 447 GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A    F++A + F +L     + N +  +T+L +  ++  +     +HA   KL +    
Sbjct: 507 ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V +AL+  Y  CG++ DA  VF+G+V ++ ++WTA+++ + ++   E  L++   MR  
Sbjct: 567 FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
               N +  T  L +   L +  +G   HA  +K        V  A++DMY+  G I +A
Sbjct: 627 VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDA 686

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +    EM  +   + W+  I+ + +  + E+A E F +M+R+  + +EF+ SS+L+AC+ 
Sbjct: 687 RLAF-EMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACAN 745

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +P L   +QIH+  +K   ES + VG++LI+ Y KC   E +  +FS L   + VSWN++
Sbjct: 746 MPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTI 805

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           I  YS++G    A+ +F +M    +  T  T+ +VL AC+ +  +    +V
Sbjct: 806 IVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQV 856



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 8/267 (2%)

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG--MALGDFVGTAIVDMYSGLGEIW 371
           G+D   Y +   L  C +  ++  G   H  V++ G    L  F    +++MY+ +G   
Sbjct: 425 GVD--SYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFG 482

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A +    + +  + VS+   + G     + EEA   F ++       ++F  +++LK  
Sbjct: 483 SAHRVFDGLPER-NMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLV 541

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
             + +L     +H+   K   + N  VGS+LI+AY+ CG   DA RVF  +   D V+W 
Sbjct: 542 VAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWT 601

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +M+  YS+N      + +F KM V   +       +VL A      V  G+ +    VK 
Sbjct: 602 AMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT 661

Query: 552 YGILPEEAH-YSCMVDLLGRAGKLEIA 577
             +   E H Y  ++D+  + G +E A
Sbjct: 662 --LYDTERHVYGALLDMYAKCGNIEDA 686


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/632 (32%), Positives = 338/632 (53%), Gaps = 16/632 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L  C     ++ G   HA + K++   + FV  +L+ MYA+ G +     +   M  
Sbjct: 286 VAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDD 345

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +L+G+ +N L+ +A  F+ ++     +P+     +++A          G Q+
Sbjct: 346 WDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQI 405

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  MK    S   V N+L+ MY K   M+  + +F+ +  ++V+SWT II G  Q+G +
Sbjct: 406 HAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSH 465

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTA 359
            + L L   ++ +GID +    +  L +C+ L+        H+ +I++G  L D V    
Sbjct: 466 SRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG--LSDLVLQNG 523

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           IVD+Y   G +  A +   E+ +    VSW + I+ +  N    EA+E F  M       
Sbjct: 524 IVDVYGECGNVDYAARMF-ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEP 582

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  +  SIL A + L +L   ++IH  +++  F     + S+L++ Y +CG+ E +  VF
Sbjct: 583 DSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVF 642

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + +   D+V W SMI AY  +G  R AI LF +M  E I P +  F+AVL ACSHSGL+ 
Sbjct: 643 NFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMN 702

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G++  ESM  EY + P   HY+C+VDLLGRA  LE A  F+  + ++PTA +W  L  A
Sbjct: 703 EGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGA 762

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ HS+ ++ E  ++++LE+DP++   YV +SN+Y+      D E  R  MK   + K P
Sbjct: 763 CQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNP 822

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKED 709
           GCSWIEV NK++ F +++KSH +  ++Y KL Q+ +++   G          H   E+E 
Sbjct: 823 GCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEK 882

Query: 710 -RVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
            ++LY HSERLA+ +G+++ P       ++ L
Sbjct: 883 VQMLYGHSERLAIAYGMLTTPEGASLRITKNL 914



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 267/552 (48%), Gaps = 20/552 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           +L  C   +    G   H L  K       FV  S+V MY KC D+     +  +MP   
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE 245

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N +++ Y+ N    +A   F ++    + PN YT+   L  C   S I +G  +H
Sbjct: 246 DVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K  Y     V+NAL+ MY + G M +A ++F  +   + ISW ++++GF Q+G Y 
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYH 365

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L+    MR+ G  P+       +A+ A   N+  G   HA  +K G+     VG ++V
Sbjct: 366 EALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLV 425

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+    +        +M      VSW   IAG  +N     A+E F ++       D 
Sbjct: 426 DMYAKFCSMKYMDCIFDKM-PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 484

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
              SSIL ACS L  +++ ++IHS I++    S++ + + +++ Y +CG+ + A R+F  
Sbjct: 485 MMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFEL 543

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVVSW SMI  Y  NG A +A+ LF  M   G+ P + + +++LSA +    ++ G
Sbjct: 544 IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 603

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA---LIFISNLPIKPTAPIWRPLFA 598
           +++   ++++ G + E +  S +VD+  R G LE +     FI N  +     +W  +  
Sbjct: 604 KEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMIN 658

Query: 599 ACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EI 655
           A   H   + A  + +++ +  + PD  A +V +    + +GL    E +R L  MK E 
Sbjct: 659 AYGMHGCGRAAIDLFRRMEDESIAPDHIA-FVAVLYACSHSGLM--NEGRRFLESMKYEY 715

Query: 656 SKEPGCSWIEVY 667
             EP   W E Y
Sbjct: 716 QLEP---WPEHY 724



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 241/486 (49%), Gaps = 7/486 (1%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  C  ++ L  G++ HA +IT  A+    F++  LV MY KCG +     +   MP+ 
Sbjct: 84  VLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHK 143

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            I + N ++  Y  N     +   + ++    +  +  T+  +L  CG L     G ++H
Sbjct: 144 TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVH 203

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGDY 300
              +K  Y+S   V+N+++ MY KC  +  A  +F+ + ++ +V+SW ++I+ +  +G  
Sbjct: 204 GLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQS 263

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LRL   M++  + PN YTF  AL +C        G   HA V+K    +  FV  A+
Sbjct: 264 IEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANAL 323

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G++ EA      M     ++SWN+ ++GF +N    EA++ + +M       D
Sbjct: 324 IAMYARFGKMGEAANIFYNM-DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPD 382

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                SI+ A +   +     QIH+  +K+  +S++ VG+SL++ Y K  S +  + +F 
Sbjct: 383 LVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   DVVSW ++I  ++QNG   +A+ LF ++ +EGI        ++L ACS   L+  
Sbjct: 443 KMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISS 502

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            +++   ++++   L +    + +VD+ G  G ++ A      +  K     W  +  +C
Sbjct: 503 VKEIHSYIIRKG--LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVS-WTSMI-SC 558

Query: 601 RCHSDL 606
             H+ L
Sbjct: 559 YVHNGL 564



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 170/326 (52%), Gaps = 1/326 (0%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEG 278
            YS++L +CGS  A+ EG+Q+HA  +    L  +  +S  L+ MY KCG + DAE +F+G
Sbjct: 80  AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  + + +W A+I  +  +G+    L L   MR  GI  +  TF   L +C  L++   G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H   IK G     FV  +IV MY+   ++  A++    M +    VSWN+ I+ +  
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N ++ EA+  F +M +   A + +T+ + L+AC     +     IH+ ++KS +  NV V
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            ++LI  Y + G   +A  +F  +   D +SWNSM+  + QNG   +A+  + +M   G 
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQ 379

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKV 544
           +P     +++++A + SG    G ++
Sbjct: 380 KPDLVAVISIIAASARSGNTLHGMQI 405



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 6/315 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI +++  +R      G + HA   K  +  D  V  SLV+MYAK   +K M  +  +MP
Sbjct: 386 VISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             D+ S   ++AG+A+N    +A   F  ++L+GID+  +    S++L  C  L  I   
Sbjct: 446 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDL--DVMMISSILLACSGLKLISSV 503

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K++H+  ++ + LS   + N ++ +Y +CG ++ A  +FE +  ++V+SWT++I+ +  +
Sbjct: 504 KEIHSYIIR-KGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 562

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + L L  LM+E G++P+  +    L++ ASL     G   H  +I++G  L   + 
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA 622

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           + +VDMY+  G + E  + +    ++   V W + I  +  +     AI+ F +M     
Sbjct: 623 STLVDMYARCGTL-EKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 681

Query: 418 ACDEFTYSSILKACS 432
           A D   + ++L ACS
Sbjct: 682 APDHIAFVAVLYACS 696


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 200/625 (32%), Positives = 330/625 (52%), Gaps = 13/625 (2%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   +  ++S C+  +    G   H+L  ++++     V  +LVNMY+  G +     + 
Sbjct: 547  DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 606

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
              M   D+ S N +++ Y +N     A     +L   +  PNH T+S+ L  C S  A+ 
Sbjct: 607  WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666

Query: 236  EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            +GK +HA  ++L       V N+L+TMY KC  MEDAE VF+ +   +++S+  +I G+ 
Sbjct: 667  DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMALGD 354
               D  K +++   MR  GI PN  T      S AS  + H  G   HA +I+ G    +
Sbjct: 727  VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 786

Query: 355  FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +V  +++ MY+  G + E+   +     + + VSWNA IA   +    EEA++ F  M  
Sbjct: 787  YVANSLITMYAKCGNL-ESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH 845

Query: 415  NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                 D    +  L +C+ L SL    Q+H   +KS  +S+ +V ++ ++ Y KCG  ++
Sbjct: 846  AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 905

Query: 475  AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
              +V           WN++I  Y++ G  ++A   F++MV  G +P   TF+A+LSACSH
Sbjct: 906  MLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSH 965

Query: 535  SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            +GLV  G   + SM   +G+ P   H  C+VDLLGR G+   A  FI  +P+ P   IWR
Sbjct: 966  AGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWR 1025

Query: 595  PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
             L ++ R H +L++    +K++LELDP D + YV LSN+YA     AD ++ R  MK   
Sbjct: 1026 SLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTIN 1085

Query: 655  ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TD 704
            I+K P CSW+++ N++  F   ++ H    K+Y KL +++ ++ ++G+          TD
Sbjct: 1086 INKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTD 1145

Query: 705  NEKEDRVLY-HSERLAVGFGLISLP 728
             E++++ L+ HSE+LA+ +GLI +P
Sbjct: 1146 EEQKEQNLWNHSEKLALAYGLIVVP 1170



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 248/498 (49%), Gaps = 12/498 (2%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP++ ++L SL      +       R+E +  G   HAL  +  + G+ ++  +L+++Y 
Sbjct: 339 VPLSGFALASL------VTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYG 392

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTY 221
             G +     +  +MP  ++ S   L+   + N   ++A   +  ++ DG+    N   +
Sbjct: 393 SRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNAN--AF 450

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +T++++CGSL     G Q+ +Q +     ++ +V+N+L+TM+   G + DAE +F+ + +
Sbjct: 451 ATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEE 510

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            + ISW A+I+ +   G   K   +   MR  G+ P+  T    ++ CAS  +   G   
Sbjct: 511 HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGI 570

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H+  ++  +     V  A+V+MYS  G++ +A+     M +    +SWN  I+ + +N  
Sbjct: 571 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR-DLISWNTMISSYVQNCN 629

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           + +A++   Q+   + + +  T+SS L ACS   +L   + +H+ +++   + N+ VG+S
Sbjct: 630 STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNS 689

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  Y KC S EDAE+VF  +   D+VS+N +I  Y+      KA+ +F  M   GI+P 
Sbjct: 690 LITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPN 749

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T + +  + + S  + +  +   + +   G L +E   + ++ +  + G LE +    
Sbjct: 750 YITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIF 809

Query: 582 SNLPIKPTAPIWRPLFAA 599
           +++  K     W  + AA
Sbjct: 810 NSITNKNIVS-WNAIIAA 826



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 4/190 (2%)

Query: 115  LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            LD+  + E LS C+    LE G + H L  K+ +  D +V  + ++MY KCG +  M+ V
Sbjct: 850  LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 909

Query: 175  VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            V           N L++GYAK   F +A   F ++     +P++ T+  +L+ C     +
Sbjct: 910  VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 969

Query: 235  DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
            D+G   +  +M   +     + +   ++ +  + G   +AE   E + V  N + W +++
Sbjct: 970  DKGIDYY-NSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLL 1028

Query: 292  NGFKQHGDYE 301
            +  + H + E
Sbjct: 1029 SSSRTHKNLE 1038


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/634 (31%), Positives = 330/634 (52%), Gaps = 17/634 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+ C+  E L+ G   H  I +    GD FV  +L+NMY KCG ++      K++ +
Sbjct: 110 VAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH 169

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            D+ S   ++A   ++  F  A   +  ++LDG  V PN  T  T+    G    + EGK
Sbjct: 170 RDVVSWTAMIAACVQHDQFALARWLYRRMQLDG--VVPNKITLYTVFNAYGDPHYLSEGK 227

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +++        S   V N+ + M+   G++ DA  +FE +V R+V++W  +I  + Q+ 
Sbjct: 228 FIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNE 287

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           ++ + +RL   +++DGI  N+ TF + L    SL +   G + H  V + G      V T
Sbjct: 288 NFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVAT 347

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ +Y       +A K   +MG S   ++W      + +N   +EA++ F +M      
Sbjct: 348 ALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRR 406

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               T  ++L  C+ L +L    QIHS I+++ F   + V ++LI  Y KCG   +A  V
Sbjct: 407 PTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSV 466

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D++ WNSM+ AY+Q+G   + + LF +M ++G +    +F++VLSA SHSG V
Sbjct: 467 FEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSV 526

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLF 597
            DG + F +M++++ I P    Y C+VDLLGRAG+++ A+  +  L    P   +W  L 
Sbjct: 527 TDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 586

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H+    A+  ++Q+LE DP  +  YV LSN+YA AG        RKLM+ + + K
Sbjct: 587 GACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKK 646

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
           EPG S IE+ N+++ F   ++SH     +Y +L  L  ++   G+            D  
Sbjct: 647 EPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDER 706

Query: 707 KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           KED + YHSERLA+ FGL+S P        + L 
Sbjct: 707 KEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLR 740



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 259/530 (48%), Gaps = 6/530 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D  F + +L  CS  + ++ GRR H  +       +  V   L+ MYA+CG +     V 
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D+ +   ++  Y +   +D+A   F ++   DV P   TY  +L  C S  ++ 
Sbjct: 64  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G ++H Q ++  +     V  AL+ MY KCG +  A   F+ L  R+V+SWTA+I    
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 183

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QH  +     L   M+ DG+ PN+ T      +         G   ++ V  R M     
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  + ++M+   G + +A++  ++M      V+WN  I  + +N+   EA+  F ++ ++
Sbjct: 244 VMNSAMNMFGNAGLLGDARRLFEDM-VDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQD 302

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++ T+  +L   + L SLA  + IH  + ++ ++ +V V ++L+  Y +C +   A
Sbjct: 303 GIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQA 362

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F  + + DV++W  M  AY+QNG  ++A+ LF++M +EG RPT++T +AVL  C+H 
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 422

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +Q G+++  S + E G   E    + ++++ G+ GK+  A      +  K    +W  
Sbjct: 423 AALQKGRQI-HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNS 480

Query: 596 LFAACRCHS--DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +  A   H   D  +  F   Q L+ +  DA  +V++ +  + +G   D 
Sbjct: 481 MLGAYAQHGYYDETLQLFNQMQ-LDGEKADAVSFVSVLSALSHSGSVTDG 529



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 182/359 (50%), Gaps = 8/359 (2%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+   +  +L  C S   +D G+++H       +     V   L+ MY +CG + +A+ 
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VFE L +++V +WT +I  + Q GDY++ L +   M+E+ + P + T+   L +CAS  +
Sbjct: 62  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI---WEAKKQLKEMGKSASSVSWNA 391
              G   H Q++++G     FVGTA+++MY+  G +   W++ K+L+        VSW A
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH----RDVVSWTA 177

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IA   ++ +   A   + +M  +    ++ T  ++  A      L+  + I+S +    
Sbjct: 178 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV 237

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            ES+V V +S +  +   G   DA R+F  +   DVV+WN +I  Y QN    +A+ LF 
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++  +GI+  + TF+ +L+  +    +  G KV   +VKE G   +    + ++ L GR
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGR 355



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    L+ GR+ H+ I +     +  V  +L+NMY KCG +    +V ++M 
Sbjct: 412 LVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA 471

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             DI   N +L  YA++  +D+    F  ++LDG   + +  ++ ++L+      ++ +G
Sbjct: 472 KRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG--EKADAVSFVSVLSALSHSGSVTDG 529

Query: 238 KQ 239
            Q
Sbjct: 530 YQ 531


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 324/603 (53%), Gaps = 13/603 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H  I K+       V  SLV  Y K   + S   V  +M   D+ S N ++ GY  
Sbjct: 63  GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 122

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L ++  S F+++    ++ +  T  ++ A C     I  G+ +H+  +K  +  +   
Sbjct: 123 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 182

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N LL MY KCG ++ A++VF  +  R+V+S+T++I G+ + G   + ++L   M E+GI
Sbjct: 183 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 242

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ YT T  L  CA  R    G   H  + +  +    FV  A++DMY+  G + EA+ 
Sbjct: 243 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 302

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLL 434
              EM +    +SWN  I G+ +N    EA+  F+ ++     + DE T + +L AC+ L
Sbjct: 303 VFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 361

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +     +IH  I+++ + S+ HV +SL++ Y KCG+   A  +F  + + D+VSW  MI
Sbjct: 362 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 421

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +G  ++AI LF +M   GI     +F+++L ACSHSGLV +G + F  M  E  I
Sbjct: 422 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 481

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+C+VD+L R G L  A  FI N+PI P A IW  L   CR H D+K+AE +++
Sbjct: 482 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 541

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ EL+P++   YV ++N+YAEA      +  RK +  + + K PGCSWIE+  ++  F 
Sbjct: 542 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 601

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
           + + S+ E   +   L+++  ++ + G++           + EKE+ +  HSE+LA+  G
Sbjct: 602 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 661

Query: 724 LIS 726
           +IS
Sbjct: 662 IIS 664



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 238/490 (48%), Gaps = 30/490 (6%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N L+   AK+  F  +   F K+    V+ + YT+S +     SL ++  G+QLH   +K
Sbjct: 13  NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 72

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +  + +V N+L+  Y+K   ++ A  VF+ + +R+VISW +IING+  +G  EK L +
Sbjct: 73  SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 132

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   GI+ +  T     A CA  R   +G   H+  +K   +  D     ++DMYS 
Sbjct: 133 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 192

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G++  AK   +EM    S VS+ + IAG+ R     EA++ F +M     + D +T ++
Sbjct: 193 CGDLDSAKAVFREM-SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 251

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L  C+    L   +++H  I ++    ++ V ++L++ Y KCGS ++AE VFS++   D
Sbjct: 252 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 311

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           ++SWN++I  YS+N  A +A+ LF  ++ E    P   T   VL AC+       G+++ 
Sbjct: 312 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 371

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
             +++  G   +    + +VD+  + G L +A +   ++  K     W  + A    H  
Sbjct: 372 GYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS-WTVMIAGYGMHGF 429

Query: 606 LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
            K A                  + L N   +AG++AD        ++  +S    CS   
Sbjct: 430 GKEA------------------IALFNQMRQAGIEAD--------EISFVSLLYACSHSG 463

Query: 666 VYNKIYRFFS 675
           + ++ +RFF+
Sbjct: 464 LVDEGWRFFN 473



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 191/387 (49%), Gaps = 24/387 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F++  +R  +S + +I NGY++                   +G  + G S  V +
Sbjct: 97  SARKVFDEMTERDVISWNSII-NGYVS-------------------NGLAEKGLSVFVQM 136

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
               +E  +D   ++ V + C+    + LGR  H++  K     +     +L++MY+KCG
Sbjct: 137 LVSGIE--IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 194

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           D+ S  AV ++M    + S   ++AGYA+  L  +A   F +++   + P+ YT + +L 
Sbjct: 195 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 254

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C     +DEGK++H    +        VSNAL+ MY KCG M++AE VF  +  +++IS
Sbjct: 255 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 314

Query: 287 WTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           W  II G+ ++    + L L   L+ E    P+E T    L +CASL     G   H  +
Sbjct: 315 WNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 374

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           ++ G      V  ++VDMY+  G +  A     ++  S   VSW   IAG+  +   +EA
Sbjct: 375 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEA 433

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACS 432
           I  F+QM +     DE ++ S+L ACS
Sbjct: 434 IALFNQMRQAGIEADEISFVSLLYACS 460



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 10/349 (2%)

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  ++N   + GD+   + L   M   G++ + YTF+    S +SLR+ H G   H  ++
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G    + VG ++V  Y     +  A+K   EM +    +SWN+ I G+  N   E+ +
Sbjct: 72  KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER-DVISWNSIINGYVSNGLAEKGL 130

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
             F QM+ +    D  T  S+   C+    ++    +HS  VK+ F       ++L++ Y
Sbjct: 131 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 190

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           +KCG  + A+ VF +++   VVS+ SMI  Y++ G A +A+ LFE+M  EGI P   T  
Sbjct: 191 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 250

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           AVL+ C+   L+ +G++V E  +KE  +  +    + ++D+  + G ++ A +  S + +
Sbjct: 251 AVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309

Query: 587 KPTAPIWRPLFAAC--RCHSDLKMAEFISKQILE---LDPDDAAVYVTL 630
           K     W  +       C+++  ++ F    +LE     PD+  V   L
Sbjct: 310 KDIIS-WNTIIGGYSKNCYANEALSLF--NLLLEEKRFSPDERTVACVL 355



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 4/187 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D++ V  VL  C+     + GR  H  I +     D+ V  SLV+MYAKCG +     + 
Sbjct: 347 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 406

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ S   ++AGY  +    +A + F ++    ++ +  ++ ++L  C     +D
Sbjct: 407 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 466

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG +     M+ +   +  V +   ++ M  + G +  A    E + +  +   W A++ 
Sbjct: 467 EGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 525

Query: 293 GFKQHGD 299
           G + H D
Sbjct: 526 GCRIHHD 532


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/620 (31%), Positives = 333/620 (53%), Gaps = 13/620 (2%)

Query: 133  LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            L+ GR  H L+ K  +  +  +  +L+ +Y++ G  +    V + M   D+ S N ++A 
Sbjct: 1064 LKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMAC 1123

Query: 193  YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            Y ++           +L  +    NH T+++ LA C +   + E K +HA  +   +   
Sbjct: 1124 YVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDF 1183

Query: 253  TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              V NAL+TMY K GMM +A+ V + + Q + ++W A+I G  ++ +  + ++   L+RE
Sbjct: 1184 LIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIRE 1243

Query: 313  DGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI  N  T    L +C++  +    G   HA ++  G    D+V  +++ MY+  G++ 
Sbjct: 1244 KGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLN 1303

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
             +      +G + S ++WNA +A    +   EEA++ F +M       D+F++S  L A 
Sbjct: 1304 SSNYIFDGLG-NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAAT 1362

Query: 432  SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            + L  L   +Q+H  ++K  FES++HV ++ ++ Y KCG   D  ++  Q      +SWN
Sbjct: 1363 ANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWN 1422

Query: 492  SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
             +I A++++G  +KA   F +M+  G +P + TF+++LSAC+H GLV +G   ++SM +E
Sbjct: 1423 ILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTRE 1482

Query: 552  YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
            +G+ P   H  C++DLLGR+G+L  A  FI  +P+ P    WR L AACR H +L++A  
Sbjct: 1483 FGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARK 1542

Query: 612  ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             ++ +LELDP D + YV  SN+ A +G   D E  RK M    I K+P CSW+++ +K++
Sbjct: 1543 TAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVH 1602

Query: 672  RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
             F    K H +  ++  KL +LM+  ++ G+            + +KE  +  HSERLA+
Sbjct: 1603 SFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1662

Query: 721  GFGLISLPAKNKFECSRTLE 740
             FGLI+ P  +     + L 
Sbjct: 1663 AFGLINTPESSTLRIFKNLR 1682



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 168/556 (30%), Positives = 284/556 (51%), Gaps = 2/556 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD    +++L  C  ++  + G   H  +       D  +   L+  Y K GD+ +   V
Sbjct: 28  LDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNV 87

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP   + S   +++GY++N  F++AF  F  +    V+ N +TY + L  C SL  +
Sbjct: 88  FDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCL 147

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D G Q+     K +++    V +AL+  + KCG MEDA  +F  +++R+V+SW A+I G+
Sbjct: 148 DMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGY 207

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
              G  +    +   M   G+ P+ YT    L + A      +    H  + + G    D
Sbjct: 208 AVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 267

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF-FRNQKTEEAIEAFSQMV 413
            V   +++ Y+  G +  AK   K M K     S  A I G+      + +A++ F +M 
Sbjct: 268 IVTGLLINAYAKNGSLRSAKDLRKGMLKK-DLFSSTALITGYAHEGIYSVDALDLFKEMN 326

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           + +   D+    S+L  C+ L S A   QIH+  +K +   +V +G++LI+ Y K G  E
Sbjct: 327 QMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIE 386

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA+R F ++   +V+SW S+I  Y+++G    A+ L++KM  +G +P + TFL++L ACS
Sbjct: 387 DAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACS 446

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GL  +G + F +MV +Y I P   HYSCMVDL  R G LE A   +  + IK  A +W
Sbjct: 447 HTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLW 506

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             +  A   +  + + +  +  +  + P+++  YV L+++Y+ AGL  DA + RKLM+ +
Sbjct: 507 GAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEER 566

Query: 654 EISKEPGCSWIEVYNK 669
              K  G S+ +   K
Sbjct: 567 STKKNAGYSFFQATKK 582



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 234/465 (50%), Gaps = 4/465 (0%)

Query: 136  GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
            G+  HA     +V    F T +L+NMY+K G+I+    V  +M + + AS + +L+GY +
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 196  NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG-SLSAIDEGKQLHAQTMKLQYLSKTA 254
              L+++A   F ++ G+ V+PN +  ++++  C  S    DEG Q+H   +K   L    
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882

Query: 255  VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            V  AL+  Y   G++ +A+ +FE +   NV+SWT+++ G+   G+  + L +   MR++G
Sbjct: 883  VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942

Query: 315  IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
            +  N+ TF    +SC  L +  +GY     +I+ G      V  +++ M+S    + EA 
Sbjct: 943  VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 1002

Query: 375  KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
                 M +    +SWNA I+ +  +    E++  F  M       +  T SS+L  CS +
Sbjct: 1003 YVFDHMNE-CDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 1061

Query: 435  PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             +L     IH  +VK   +SNV + ++L+  Y++ G  EDAE VF  +T  D++SWNSM+
Sbjct: 1062 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 1121

Query: 495  KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              Y Q+G+    + +  +++  G    + TF + L+ACS+   + +  K+  +++   G 
Sbjct: 1122 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE-SKIVHALIIVAGF 1180

Query: 555  LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
                   + +V + G+ G +  A   +  +P +P    W  L   
Sbjct: 1181 HDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 253/519 (48%), Gaps = 5/519 (0%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            V S C   E   LG +    I +        V  SL++M++    ++    V   M   D
Sbjct: 953  VTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECD 1012

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            I S N +++ YA + L  ++   F  +  +  + N  T S++L++C S+  +  G+ +H 
Sbjct: 1013 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 1072

Query: 243  QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +KL   S   + N LLT+Y + G  EDAE VF+ + +R++ISW +++  + Q G    
Sbjct: 1073 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 1132

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             L+++  + + G   N  TF  ALA+C++        + HA +I  G      VG A+V 
Sbjct: 1133 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVT 1192

Query: 363  MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            MY  LG + EAKK L+ M      V+WNA I G   N++  EA++A+  +       +  
Sbjct: 1193 MYGKLGMMMEAKKVLQTM-PQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 1251

Query: 423  TYSSILKACSLLPSLATCEQ-IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T  S+L ACS    L      IH+ IV + FES+ +V +SLI  Y KCG    +  +F  
Sbjct: 1252 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 1311

Query: 482  LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
            L     ++WN+M+ A + +G   +A+ +F +M   G+     +F   L+A ++  ++++G
Sbjct: 1312 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 1371

Query: 542  QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            Q++   +V + G   +    +  +D+ G+ G++   L  +   PI  +   W  L +A  
Sbjct: 1372 QQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PINRSRLSWNILISAFA 1429

Query: 602  CHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGL 639
             H   + A     ++L+L P  D   +V+L +     GL
Sbjct: 1430 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGL 1468



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/527 (23%), Positives = 254/527 (48%), Gaps = 14/527 (2%)

Query: 120  VIEVLSYCSREECL-ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
            V  +++ CSR   + + G + H  + KT + GD +V  +LV+ Y   G + +   + ++M
Sbjct: 848  VASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM 907

Query: 179  PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            P  ++ S   L+ GY+ +    +  + + ++    V  N  T++T+ + CG L     G 
Sbjct: 908  PDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGY 967

Query: 239  QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            Q+    ++  +    +V+N+L++M+     +E+A  VF+ + + ++ISW A+I+ +  HG
Sbjct: 968  QVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHG 1027

Query: 299  DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
               + LR    MR    + N  T +  L+ C+S+ N   G   H  V+K G+     +  
Sbjct: 1028 LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICN 1087

Query: 359  AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
             ++ +YS  G   +A+   + M +    +SWN+ +A + ++ K  + ++  +++++    
Sbjct: 1088 TLLTLYSEAGRSEDAELVFQAMTER-DLISWNSMMACYVQDGKCLDGLKILAELLQMGKV 1146

Query: 419  CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             +  T++S L ACS    L   + +H+ I+ + F   + VG++L+  Y K G   +A++V
Sbjct: 1147 MNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKV 1206

Query: 479  FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH-SGL 537
               +   D V+WN++I  +++N    +A+  ++ +  +GI     T ++VL ACS    L
Sbjct: 1207 LQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDL 1266

Query: 538  VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPL 596
            ++ G  +   +V   G   ++   + ++ +  + G L  +      L  K  +PI W  +
Sbjct: 1267 LKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK--SPITWNAM 1323

Query: 597  FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
             AA   H          ++ L++  +   V V L       GL A A
Sbjct: 1324 VAANAHHG-------CGEEALKIFGEMRNVGVNLDQFSFSGGLAATA 1363



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%)

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           LK  S + S    + +H+  +       +   ++LI  Y+K G+ E A  VF ++   + 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
            SW++M+  Y + G   +A+ LF +M   G+ P      ++++ACS SG + D       
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V + GIL +    + +V   G  G +  A      +P
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP 908


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/618 (33%), Positives = 334/618 (54%), Gaps = 18/618 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+R   L  GR  HA + K  +  D +   SLV +YAK G +     V   MP  D
Sbjct: 126 VLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARD 185

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I S N ++ GY  N +   A + F ++ D + V  +       LA C   SA+  G+++H
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++        V  +L+ MY KCG +  AE+VF  +  R V++W  +I G+  +   E
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN---E 302

Query: 302 KPLRLV-CLM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           +P+    C M  R DG      T    L +CA   +S  G   HA V++R       + T
Sbjct: 303 RPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLET 362

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+++MY  +G++  ++K   ++    + VSWN  IA +   +  +EAI  F +++     
Sbjct: 363 ALLEMYGKVGKVESSEKIFGQI-TDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY 421

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FT ++++ A  LL S+  C+Q+HS IVK  +  +  + ++++  Y +CG+   +  +
Sbjct: 422 PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREI 481

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   DV+SWN++I  Y+ +G+ + A+ +F++M   G+ P  STF++VL+ACS SGL 
Sbjct: 482 FDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLE 541

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G K F SM +EYG++P+  HY CM DLLGRAG+L   L FI N+PI PT+ IW  L  
Sbjct: 542 AEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLT 601

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           A R  +D+ +AE+ +++I +L+ ++   YV LS+MYA+AG   D E  R LMK K + + 
Sbjct: 602 ASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRT 661

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHTDNEKEDRVLY---- 713
              S +E+ NK   F + + SH +  K++E    L + I ED+  + N ++         
Sbjct: 662 EARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDLDSSSNLRDSDPFASSTT 721

Query: 714 -----HSERLAVGFGLIS 726
                HS RLAV FGLIS
Sbjct: 722 VLPNKHSVRLAVAFGLIS 739



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 227/470 (48%), Gaps = 11/470 (2%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G+A   L   A + +  +     +P+ +T+  +L  C    A+ EG+  HA  +K
Sbjct: 89  NVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIK 148

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           L   +    +N+L+ +Y K G++ DAE VF+G+  R+++SW  +++G+  +G     L L
Sbjct: 149 LGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNG--MGALAL 206

Query: 307 VCLMREDG---IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
            C    +    +  +      ALA+C       +G   H   I+ G+     VGT++VDM
Sbjct: 207 ACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDM 266

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G ++ A+    +M    + V+WN  I G+  N++  +A + F QM  +    +  T
Sbjct: 267 YCKCGNVFFAENVFAKM-PLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVT 325

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
             ++L AC+   S      +H+ +V+  F  +V + ++L+E Y K G  E +E++F Q+T
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
              +VSWN+MI AY      ++AI LF +++ + + P   T   V+ A    G ++  ++
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +   +VK  G        + ++ +  R G +  +      +P K     W  +      H
Sbjct: 446 MHSYIVK-LGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVIS-WNTIIIGYAIH 503

Query: 604 SDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
              K+A   F   +   ++P++ + +V++    + +GL+A+  ++   M+
Sbjct: 504 GQGKIALEMFDEMKCSGMEPNE-STFVSVLTACSVSGLEAEGWKEFNSMQ 552



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 13/324 (4%)

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR---EDG 314
           +L+  ++  G M++A   F G+ +        +I GF    D + PL  +   R   + G
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGF---ADADLPLDALAAYRAMLDAG 115

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             P+ +TF V L  CA       G   HA VIK G+    +   ++V +Y+ LG + +A+
Sbjct: 116 ARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAE 175

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA---ACDEFTYSSILKAC 431
           +    M  +   VSWN  + G+  N     A+  F +M  NDA     D     + L AC
Sbjct: 176 RVFDGM-PARDIVSWNTMVDGYVSNGMGALALACFREM--NDALQVGHDSVGVIAALAAC 232

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            L  +LA   +IH   ++   E +V VG+SL++ Y KCG+   AE VF+++    VV+WN
Sbjct: 233 CLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWN 292

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            MI  Y+ N R   A   F +M V+G +    T + +L+AC+ +     G+ V   +V+ 
Sbjct: 293 CMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRR 352

Query: 552 YGILPEEAHYSCMVDLLGRAGKLE 575
           +  LP     + ++++ G+ GK+E
Sbjct: 353 H-FLPHVVLETALLEMYGKVGKVE 375



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 169/353 (47%), Gaps = 13/353 (3%)

Query: 89  DSFPDGFIDDGCSNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALI 143
           ++  DG++ +G    + + C+     +L+   D   VI  L+ C  E  L LGR  H   
Sbjct: 190 NTMVDGYVSNGM-GALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYA 248

Query: 144 TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
            +  +  D  V  SLV+MY KCG++     V  +MP   + + NC++ GYA N     AF
Sbjct: 249 IRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAF 308

Query: 204 SFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
             F  +++DG  V+    T   +L  C    +   G+ +HA  ++  +L    +  ALL 
Sbjct: 309 DCFMQMRVDGFQVEV--VTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLE 366

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY K G +E +E +F  +  + ++SW  +I  +     Y++ + L   +    + P+ +T
Sbjct: 367 MYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFT 426

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM- 380
            T  + +   L +       H+ ++K G      +  A++ MY+  G I  +++   +M 
Sbjct: 427 MTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMP 486

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           GK    +SWN  I G+  + + + A+E F +M  +    +E T+ S+L ACS+
Sbjct: 487 GKDV--ISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSV 537


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 321/601 (53%), Gaps = 12/601 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + FV + L++ Y+ C  +     V   +   D      +++ Y++N   + AF  F K+ 
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +PN +  +++L     L ++  GK +H   +K    ++  V  ALL MY KCG ++
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA   FE +   +VI  + +I+ + Q    E+   L   +    + PNEY+ +  L +C 
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           ++     G   H   IK G     FVG A++D Y+   ++  + K    + + A+ VSWN
Sbjct: 376 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWN 434

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             + GF ++   EEA+  F +M      C + TYSS+L+AC+   S+    QIH  I KS
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            F ++  +G+SLI+ Y KCG   DA +VF  L   D++SWN++I  Y+ +G+A  A+ LF
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++M    +   + TF+A+LS CS +GLV  G  +F+SM  ++GI P   HY+C+V LLGR
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG+L  AL FI ++P  P+A +WR L ++C  H ++ +  F +++ILE++P D   YV L
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLL 674

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SNMYA AG        RK M+   + K PG SW+E+  +I+ F   +  H +M  +   L
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML 734

Query: 691 KQLMQQ------IEDIG----HTDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
           + L  +      I DI       D E++ R+L+ HSERLA+ +GL+  P  +     + L
Sbjct: 735 EWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794

Query: 740 E 740
            
Sbjct: 795 R 795



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 217/417 (52%), Gaps = 3/417 (0%)

Query: 136 GRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           GR  H  + +    G  D F    L+NMY K G + S   +  +MP  ++ S   L+  +
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+   F+ A + F +L     + N +  +TML +  ++ A      +H+   KL +    
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V + L+  Y  C ++ DAE VF G+V+++ + WTA+++ + ++   E   R+   MR  
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  PN +  T  L +   L +  +G   H   IK        VG A++DMY+  G+I +A
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +    EM      +  +  I+ + ++ + E+A E F +++R+    +E++ SS+L+AC+ 
Sbjct: 318 RLAF-EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +  L   +QIH+  +K   ES++ VG++L++ Y KC   + + ++FS L  A+ VSWN++
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 436

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +  +SQ+G   +A+ +F +M    +  T  T+ +VL AC+ +  ++   ++  S+ K
Sbjct: 437 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 189/557 (33%), Positives = 307/557 (55%), Gaps = 3/557 (0%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           G   +  +L+  Y   G I     +  +MP  D+ +   ++AGY        A+  F ++
Sbjct: 41  GPSVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEM 100

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM- 268
              ++ PN +T S++L  C  +  +  G+ +H   +K        V NAL+ MY  C + 
Sbjct: 101 MNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVS 160

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           M+DA  VF G+  +N +SWT +I G+    D    LR+   M  + ++ N ++F++A+ +
Sbjct: 161 MDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRA 220

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C S+ +   G   HA V K G      V  +I+DMY       EA +   EM +    ++
Sbjct: 221 CTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQR-DLIT 279

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN  IAG+ R+  TE ++  FS M     + + FT++SI+ AC+ L  L   +QIH RI+
Sbjct: 280 WNTLIAGYERSNPTE-SLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRII 338

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +   + N+ + ++LI+ Y+KCG+  D+ +VF  ++  D+VSW +M+  Y  +G   +A+ 
Sbjct: 339 RRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVE 398

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF+KMV  GIRP    F+A+LSACSH+GLV +G + F+ MV +Y I P++  Y C+VDLL
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAGK+E A   I ++P KP   +W P   AC+ H+   + +  + +IL+L P  A  YV
Sbjct: 459 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYV 518

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            LSN+YA  G   +    RKLMK     KE G SW+EV N +Y F   ++  S++  +Y+
Sbjct: 519 MLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQ 578

Query: 689 KLKQLMQQIEDIGHTDN 705
            L+ L+  +++ G+  +
Sbjct: 579 VLENLIGHMKESGYVPD 595



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 4/323 (1%)

Query: 112 ESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIK 169
           E L    F I  VL  C   +CL  GR  H L  K  + G  +V  +L++MYA C   + 
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               V + +   +  S   L+AGY            F ++   +V+ N +++S  +  C 
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+ +   G+QLHA   K  + S   V N++L MY +C    +A   F  + QR++I+W  
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+++    E  L +  +M  +G  PN +TFT  +A+CA+L   + G   H ++I+RG
Sbjct: 283 LIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     +  A++DMYS  G I ++ +    M +    VSW A + G+  +   EEA+E F
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR-DLVSWTAMMIGYGTHGYGEEAVELF 400

Query: 410 SQMVRNDAACDEFTYSSILKACS 432
            +MVR+    D   + +IL ACS
Sbjct: 401 DKMVRSGIRPDRVVFMAILSACS 423



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/300 (19%), Positives = 120/300 (40%), Gaps = 41/300 (13%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+    L  G++ H  I +  + G+  ++ +L++MY+KCG+I     V   M   D
Sbjct: 317 IMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRD 376

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++ GY  +   ++A   F K+    ++P+   +  +L+ C     +DEG +   
Sbjct: 377 LVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFK 436

Query: 243 QTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             +    +S    +   ++ +  + G +E+A  + E +                      
Sbjct: 437 LMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM---------------------- 474

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAI 360
            P +           P+E  +   L +C +    ++G +   +++  R    G +V  + 
Sbjct: 475 -PFK-----------PDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSN 522

Query: 361 VDMYSG-LGEIWEAKKQLKEMG-KSASSVSW---NAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +    G  GE    +K +K MG K  +  SW      +  F    +    IE   Q++ N
Sbjct: 523 IYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLEN 582


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 181/517 (35%), Positives = 299/517 (57%), Gaps = 11/517 (2%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +++ C  L +I   K++    +         + N +L M++KCGMM DA  +F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            ++N++SW  II G    GDY +  RL  +M +D  D     F   + + A L     G 
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H+  +K G+    FV  A++DMYS  G I +A+    +M +  ++V WN+ IAG+  +
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEK-TTVGWNSIIAGYALH 311

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
             +EEA+  + +M  +    D FT+S I++ C+ L SL   +Q H+ +V+  F  ++   
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y+K G  EDA+ VF  +   +V+SWN++I  Y  +GR  +A+ +FE+M+ EG+ 
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P + TFLAVLSACS+SGL   G ++FESM +++ I P   HY+CM++LLGR G L+ A  
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            I + P KPT  +W  L  ACR H + ++ +F ++++  + P+  + YV L N+Y  +G 
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNRSGR 551

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             +A    + +K + +   P CSWIE+  + Y F S +K H++  ++Y+KL +LM +I  
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISK 611

Query: 700 IGHTD---------NEKEDRV-LYHSERLAVGFGLIS 726
            G+           +E+E+RV LYHSE+LA+ FGLI+
Sbjct: 612 HGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLIN 648



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 202/435 (46%), Gaps = 38/435 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+++   ++ M+ KCG +     +  +MP  +I S N ++ G      + +AF  FL + 
Sbjct: 165 DEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMW 224

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                     + TM+     L  I  G+QLH+ ++K        V+ AL+ MY KCG +E
Sbjct: 225 QDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIE 284

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA+ VF+ + ++  + W +II G+  HG  E+ L +   MR+ G+  + +TF++ +  CA
Sbjct: 285 DAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICA 344

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L +       HA +++ G  L     TA+VD+YS  G I E  K + +M    + +SWN
Sbjct: 345 RLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRI-EDAKHVFDMMPHKNVISWN 403

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A IAG+  + +  EA+E F +M+      +  T+ ++L ACS                  
Sbjct: 404 ALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS------------------ 445

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            +      G  + E+ ++                   + +  MI+   + G   +A  L 
Sbjct: 446 -YSGLSDRGWEIFESMSR-----------DHKIKPRAMHYACMIELLGREGLLDEAFALI 493

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLG 569
           +       +PT + + A+L+AC      + G+   E +   YG+ PE+ ++Y  ++++  
Sbjct: 494 KD---APFKPTVNMWAALLTACRVHKNFELGKFAAEKL---YGMGPEKLSNYVVLLNIYN 547

Query: 570 RAGKLEIALIFISNL 584
           R+G+LE A   I  L
Sbjct: 548 RSGRLEEAAAVIQTL 562



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 113/195 (57%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ H+   KT V GD FV  +L++MY+KCG I+    V  QMP       N ++AGYA 
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   ++A S + ++    V+ +++T+S ++ IC  L++++  KQ HA  ++  +      
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           + AL+ +Y K G +EDA+ VF+ +  +NVISW A+I G+  HG   + + +   M  +G+
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430

Query: 316 DPNEYTFTVALASCA 330
            PN  TF   L++C+
Sbjct: 431 VPNHVTFLAVLSACS 445



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 5/234 (2%)

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKA 430
           EA+    ++ K +S +    +   FF+  +  EA+E F  +  N A   D  TY +++ A
Sbjct: 83  EAQVNETQLRKPSSELCGQIEKLVFFK--RYHEALELFEILELNGAYDMDSETYDALVSA 140

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C  L S+   +++ + ++ S  + + ++ + ++  + KCG   DA R+F ++   +++SW
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N++I      G   +A  LF  M  +     +  F+ ++ A +  GL+  G+++    +K
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLK 260

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
             G+  +      ++D+  + G +E A      +P K T   W  + A    H 
Sbjct: 261 T-GVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVG-WNSIIAGYALHG 312



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C+R   LE  ++ HA + +     D     +LV++Y+K G I+    V   MP+ +
Sbjct: 339 IIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AGY  +    +A   F ++    + PNH T+  +L+ C      D G ++  
Sbjct: 399 VISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFE 458

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDY 300
              +   +   A+  A ++ +  + G++++A ++  +   +  V  W A++   + H ++
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNF 518

Query: 301 E 301
           E
Sbjct: 519 E 519


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 212/672 (31%), Positives = 347/672 (51%), Gaps = 51/672 (7%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSM 171
           LL     + +LS C   + L   ++ H+ I KT +   QF  + L+   A    G++   
Sbjct: 29  LLQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYA 85

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + + + +   +    N ++ G + ++    A  F++++    V+PN YT+  +L  C  +
Sbjct: 86  LLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKV 145

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG------------------------ 267
            A  EGKQ+H   +KL   S   V  +L+ MY + G                        
Sbjct: 146 GATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALI 205

Query: 268 -------MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
                   ++DA  +FE +  R+ +SW A+I G+ Q G +E+ L     M+   + PNE 
Sbjct: 206 TGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L++CA   +  +G    + +   G+     +  A++DMYS  G++ +A+   + +
Sbjct: 266 TMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +    +SWN  I G+      +EA+  F +M +++   ++ T+ SIL AC+ L +L   
Sbjct: 326 CEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 441 EQIHSRIVKSKFE--SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
           + IH+ I K KF   +N  + +SLI+ Y KCG+ E A++VF+ +    + SWN+MI   +
Sbjct: 385 KWIHAYIDK-KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLA 443

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G A  A+ LF +M  EG  P + TF+ VLSACSH+GLV+ G++ F SMV++Y I P+ 
Sbjct: 444 MHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKL 503

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY CM+DLLGRAG  + A   + N+ +KP   IW  L  ACR H ++++ EF +K + E
Sbjct: 504 QHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFE 563

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+P++   YV LSN+YA AG   D    R  +  K + K PGCS IEV + ++ F   +K
Sbjct: 564 LEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDK 623

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHT----------DNE-KEDRVLYHSERLAVGFGLISL 727
            H +   +Y+ L ++ Q +E  GH           D E KE  + +HSE+LA+ FGLIS 
Sbjct: 624 VHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLIST 683

Query: 728 PAKNKFECSRTL 739
             +      + L
Sbjct: 684 KPETTIRIVKNL 695


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 214/679 (31%), Positives = 340/679 (50%), Gaps = 61/679 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM---P 179
           VL  C        G   HA++  +    + FV   LV+MY +CG  ++   V  +M    
Sbjct: 132 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 191

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D+ S N ++A Y +     +A   F ++ + + ++P+  +   +L  C S+ A   GK
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   ++        V NA++ MY KCGMME+A  VFE +  ++V+SW A++ G+ Q G
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311

Query: 299 DYEKPLRLVCLMRED-----------------------------------GIDPNEYTFT 323
            ++  L L   +RE+                                   G +PN  T  
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMAL-----GD--FVGTAIVDMYSGLGEIWEAKKQ 376
             L+ CA       G   H   IK  + L     GD   V  A++DMYS       A+  
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 377 LKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND--AACDEFTYSSILKACSL 433
              +  K  S V+W   I G  ++ +  EA+E FSQM++ D     + FT S  L AC+ 
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 434 LPSLATCEQIHSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
           L +L    QIH+ +++++FES  + V + LI+ Y+K G  + A  VF  +   + VSW S
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           ++  Y  +GR  +A+ +F +M   G+ P   TF+ VL ACSHSG+V  G   F  M K++
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G++P   HY+CMVDLL RAG+L+ A+  I  +P+KPT  +W  L +ACR ++++++ E+ 
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 671

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           + Q+LEL+  +   Y  LSN+YA A    D    R LMK   I K PGCSW++       
Sbjct: 672 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 731

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           FF+ + SH    ++Y+ L+ LMQ+I+ +G+            D EK D +  HSE+LA+ 
Sbjct: 732 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 791

Query: 722 FGLISLPAKNKFECSRTLE 740
           +G+++         ++ L 
Sbjct: 792 YGILTTAPGAPIRITKNLR 810



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 214/486 (44%), Gaps = 54/486 (11%)

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
              +     + ++  +  +P+HYT+  +L  CG + +   G  +HA      +     V 
Sbjct: 105 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 164

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNV---ISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           N L++MY +CG  E+A  VF+ + +R V   +SW +I+  + Q GD  + +++   M ED
Sbjct: 165 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224

Query: 314 -GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            GI P+  +    L +CAS+     G   H   ++ G+    FVG A+VDMY+  G + E
Sbjct: 225 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 284

Query: 373 AKKQLKEMGKSASSVSWNAQIAGF---------------FRNQKTE-------------- 403
           A K  + M K    VSWNA + G+                R +K E              
Sbjct: 285 ANKVFERM-KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 343

Query: 404 ------EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE---- 453
                 EA++ F QM    +  +  T  S+L  C+L  +L   ++ H   +K        
Sbjct: 344 QRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEN 403

Query: 454 ---SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD--VVSWNSMIKAYSQNGRARKAII 508
               ++ V ++LI+ Y+KC S + A  +F  +   D  VV+W  +I   +Q+G A +A+ 
Sbjct: 404 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 463

Query: 509 LFEKMVVEG--IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           LF +M+     + P   T    L AC+  G ++ G+++   +++           +C++D
Sbjct: 464 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDA 624
           +  ++G ++ A +   N+  +     W  L      H   +  +  F   Q + L PD  
Sbjct: 524 MYSKSGDVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGV 582

Query: 625 AVYVTL 630
              V L
Sbjct: 583 TFVVVL 588



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 11/332 (3%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-- 279
           ST+   C SL++     +L  Q + +Q L        +++MY+       A SV   L  
Sbjct: 33  STLFHQCKSLAS----AELIHQQLLVQGLPHDPTH--IISMYLTFNSPAKALSVLRRLHP 86

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
               V  W  +I      G  E  L+L   M+  G  P+ YTF   L +C  + +   G 
Sbjct: 87  SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 146

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS--VSWNAQIAGFF 397
             HA V   G     FVG  +V MY   G    A++   EM +      VSWN+ +A + 
Sbjct: 147 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 206

Query: 398 RNQKTEEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
           +   +  A++ F +M  +     D  +  ++L AC+ + + +  +Q+H   ++S    +V
Sbjct: 207 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 266

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            VG+++++ Y KCG  E+A +VF ++   DVVSWN+M+  YSQ GR   A+ LFEK+  E
Sbjct: 267 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 326

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            I     T+ AV++  +  GL  +   VF  M
Sbjct: 327 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 358



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 208/474 (43%), Gaps = 81/474 (17%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  C+       G++ H    ++ +  D FV  ++V+MYAKCG ++    V 
Sbjct: 230 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 289

Query: 176 KQMPYLDIASCNCL-----------------------------------LAGYAKNALFD 200
           ++M   D+ S N +                                   +AGYA+  L  
Sbjct: 290 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 349

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKT------ 253
           +A   F ++     +PN  T  ++L+ C     +  GK+ H   +K +  L +       
Sbjct: 350 EALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDL 409

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVC--L 309
            V NAL+ MY KC   + A ++F+ +    R+V++WT +I G  QHG+  + L L    L
Sbjct: 410 MVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML 469

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIVDMYSGLG 368
             ++ + PN +T + AL +CA L     G   HA V++ R  +   FV   ++DMYS  G
Sbjct: 470 QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSG 529

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A+     M +  + VSW + + G+  + + EEA++ F +M +     D  T+  +L
Sbjct: 530 DVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVL 588

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS           HS +V          G +     NK          F  +  A+  
Sbjct: 589 YACS-----------HSGMVDQ--------GINYFNGMNK---------DFGVVPGAE-- 618

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            +  M+   S+ GR  +A+ L   M    ++PT + ++A+LSAC     V+ G+
Sbjct: 619 HYACMVDLLSRAGRLDEAMELIRGMP---MKPTPAVWVALLSACRVYANVELGE 669


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 340/633 (53%), Gaps = 19/633 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L  G+ +H  + + A   ++F+   ++ MY  C    +      ++   D++S 
Sbjct: 90  CGTLGALSDGKLFHNRLQRMAN-SNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSW 148

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++ Y +    D+A   FL++  + + PN   +ST++      S +D GKQ+H+Q ++
Sbjct: 149 ATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIR 208

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           +++ +  ++   +  MY+KCG ++ AE     + +++ ++ T ++ G+ Q       L L
Sbjct: 209 IEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALLL 268

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M  +G++ + + F++ L +CA+L + + G   H+  IK G+     VGT +VD Y  
Sbjct: 269 FSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVK 328

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
               +EA +Q  E     +  SW+A IAG+ ++ K + A+E F  +       + F Y++
Sbjct: 329 CAR-FEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNN 387

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           I +ACS +  L    QIH+  +K    + +   S++I  Y+KCG  + A + F  +   D
Sbjct: 388 IFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPD 447

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+W ++I A++ +G+A +A+ LF++M   G+RP   TF+ +L+ACSHSGLV++G++  +
Sbjct: 448 TVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLD 507

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM  +YG+ P   HY+CM+D+  RAG L  AL  I ++P +P    W+ L   C    +L
Sbjct: 508 SMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNL 567

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++    +  I  LDP D+A YV + N+YA AG   +A + RK+M  + + KE  CSWI V
Sbjct: 568 EIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIV 627

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI----EDIGHTDN------EKEDRVLYHSE 716
             K++RF   ++ H +  ++Y KLK+L        E + + +N      E++D++L HSE
Sbjct: 628 KGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQLLDHSE 687

Query: 717 RLAVGFGLISLPA-------KNKFECSRTLEYA 742
           RLA+ +GLI   A       KN   C    E+A
Sbjct: 688 RLAIAYGLICTAADTPIMVFKNTRSCKDCHEFA 720



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 223/464 (48%), Gaps = 13/464 (2%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLD--GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           N  L   AK     Q   F   +D  GI + P  Y Y  +  +CG+L A+ +GK  H + 
Sbjct: 49  NLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEY--LFKMCGTLGALSDGKLFHNRL 106

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
            ++   S   + N +L MY  C     AE  F+ +V R++ SW  II+ + + G  ++ +
Sbjct: 107 QRMAN-SNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAV 165

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
            L   M + GI PN   F+  + S A      +G   H+Q+I+   A    + T I +MY
Sbjct: 166 GLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMY 225

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
              G +  A+    +M +  S+V+    + G+ +  +  +A+  FS+M+      D F +
Sbjct: 226 VKCGWLDGAEVATNKMTRK-SAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVF 284

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           S ILKAC+ L  L T +QIHS  +K   ES V VG+ L++ Y KC  +E A + F  +  
Sbjct: 285 SIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHE 344

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            +  SW+++I  Y Q+G+  +A+ +F+ +  +G+   +  +  +  ACS    +  G ++
Sbjct: 345 PNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQI 404

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI-KPTAPIWRPLFAACRCH 603
               +K+ G++   +  S M+ +  + GK++ A    + L I KP    W  +  A   H
Sbjct: 405 HADAIKK-GLVAYLSGESAMITMYSKCGKVDYA--HQAFLAIDKPDTVAWTAIICAHAYH 461

Query: 604 SDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEE 645
                A  + K++    + P +   ++ L N  + +GL  + ++
Sbjct: 462 GKASEALRLFKEMQGSGVRP-NVVTFIGLLNACSHSGLVKEGKQ 504



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 24/314 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    L  G++ H+   K  +  +  V   LV+ Y KC   ++     + +   +
Sbjct: 287 ILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPN 346

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S + L+AGY ++  FD+A   F  +    V  N + Y+ +   C ++S +  G Q+HA
Sbjct: 347 DFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHA 406

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K   ++  +  +A++TMY KCG ++ A   F  + + + ++WTAII     HG   +
Sbjct: 407 DAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASE 466

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG----- 357
            LRL   M+  G+ PN  TF   L +C+           H+ ++K G    D +      
Sbjct: 467 ALRLFKEMQGSGVRPNVVTFIGLLNACS-----------HSGLVKEGKQFLDSMTDKYGV 515

Query: 358 -------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                    ++D+YS  G + EA + ++ M      +SW + + G +  +  E  + A  
Sbjct: 516 NPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAAD 575

Query: 411 QMVRNDAACDEFTY 424
            + R D   D  TY
Sbjct: 576 NIFRLDPL-DSATY 588



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           LL+      +   CS    L  G + HA   K  +       ++++ MY+KCG +     
Sbjct: 379 LLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQ 438

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
               +   D  +   ++  +A +    +A   F ++ G  V+PN  T+  +L  C     
Sbjct: 439 AFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGL 498

Query: 234 IDEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           + EGKQ L + T K          N ++ +Y + G++ +A  V   +  + +V+SW +++
Sbjct: 499 VKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLL 558

Query: 292 NG 293
            G
Sbjct: 559 GG 560


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 198/657 (30%), Positives = 349/657 (53%), Gaps = 51/657 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + VL  CS    L  GR  H  +  + +   Q +  +LV MYA+ G +     + 
Sbjct: 109 DHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D  S N ++  ++++  +  A   F ++   D++PN  TY  +++   +   + 
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDMKPNSTTYINVISGFSTPEVLP 224

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG+++HA+ +   + S   V+ AL+ MY KCG   +A  VF+ + +R+++SW  +I  + 
Sbjct: 225 EGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV 284

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+GD+ + L L   +  +G    + TF   L +C+S++    G + H+ +++RG+     
Sbjct: 285 QNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA---FSQM 412
           V TA+V+MY+  G + EA+K    M K+  +V+W+  I  +  N   ++A +A   F ++
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAM-KNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403

Query: 413 VRNDAAC--------------------------------DEFTYSSILKACSLLPSLATC 440
              D  C                                D  T+ ++L+AC+ L  L+  
Sbjct: 404 GSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV 463

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + +H++I +S+ ESNV V ++LI  Y +CGS E+AER+F+      VVSW +M+ A+SQ 
Sbjct: 464 KALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQY 523

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           GR  +A+ LF++M +EG++P + T+ ++L  C+H G ++ G + F  M + +G+ P   H
Sbjct: 524 GRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADH 583

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           ++ MVDLLGR+G+L  A   + ++P +P    W     ACR H  L++ E  ++++ ELD
Sbjct: 584 FAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELD 643

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P   A Y+ +SN+YA  G+       RK M+ + + K PG S+IEV  K++ F S  K H
Sbjct: 644 PSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYH 703

Query: 681 SEMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGLIS 726
               ++ E+L +L   +   G+           ++ EKE  +LYHSE++A+ FGL+S
Sbjct: 704 PRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS 760



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 161/594 (27%), Positives = 279/594 (46%), Gaps = 56/594 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + VL  CS    +  GR  H  I  +    D  V  +L++MY KC  +    +V 
Sbjct: 6   DNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 176 KQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           + M +   ++ S N ++A YA+N    +A   + +++   +  +H T+ ++L  C SL+ 
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +G+++H +       S  +++NAL+TMY + G + DA+ +F+ L  R+  SW A+I  
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q GD+   LR+   M+ D + PN  T+   ++  ++      G   HA+++  G    
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSD 241

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V TA+++MY   G   EA++   +M K    VSWN  I  + +N    EA+E + ++ 
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKM-KKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                  + T+ SIL ACS + +LA    +HS I++   +S V V ++L+  Y KCGS E
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           +A +VF+ +   D V+W+++I AY+ NG    ARKA  +F+++   G R T   + A+++
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL---GSRDT-ICWNAMIT 416

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
               +G      K+F  M    G+ P+                   A+ FI+ L      
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPD-------------------AVTFIAVLE----- 452

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV-TLSNMYAEAGLQADAEEQRKL 649
                   AC     L   + +  QI E + +   V   TL NMYA  G   +AE     
Sbjct: 453 --------ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            K K +      SW  +       FSQ   ++E   +++++     + +D+ +T
Sbjct: 505 AKEKTV-----VSWTAMVAA----FSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 143/481 (29%), Positives = 234/481 (48%), Gaps = 49/481 (10%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           +D QP++ T+ T+L  C S   + EG+ LH +    ++   T V NAL++MY KC  + D
Sbjct: 1   MDRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60

Query: 272 AESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           A SVFE +   QRNV+SW A+I  + Q+G   + L L   M   G+  +  TF   L +C
Sbjct: 61  ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           +SL     G   H +V   G+     +  A+V MY+  G + +AK+  + + ++    SW
Sbjct: 121 SSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL-QTRDETSW 176

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA I    ++     A+  F +M + D   +  TY +++   S    L    +IH+ IV 
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           + F+S++ V ++LI  Y KCGS  +A  VF ++   D+VSWN MI  Y QNG   +A+ L
Sbjct: 236 NGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALEL 295

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           ++K+ +EG + T +TF+++L ACS    +  G+ V  S + E G+  E A  + +V++  
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLV-HSHILERGLDSEVAVATALVNMYA 354

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           + G LE A                R +F A                   +   DA  + T
Sbjct: 355 KCGSLEEA----------------RKVFNA-------------------MKNRDAVAWST 379

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           L   YA  G   DA + RK+   +  S++  C     +N +   + QN       K++ +
Sbjct: 380 LIGAYASNGYGKDARKARKVFD-RLGSRDTIC-----WNAMITTYVQNGCAVAAMKIFRE 433

Query: 690 L 690
           +
Sbjct: 434 M 434


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 204/621 (32%), Positives = 341/621 (54%), Gaps = 21/621 (3%)

Query: 130  EECLELGRRYHALITKTAVCGDQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
            EE    GR  HA + +T +  ++    + LVNMYAK G I    +V + M   D  S N 
Sbjct: 872  EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 931

Query: 189  LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
            L++G  +N   + A   FL++      P+++T  + L+ C SL  I  G+Q+H   +KL 
Sbjct: 932  LISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLG 991

Query: 249  YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ-HGDYEKPLRLV 307
              +  +VSNALL +Y + G   +   VF  + + + +SW ++I           + ++  
Sbjct: 992  LDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYF 1051

Query: 308  CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
              M   G   +  TF   L++ +SL    + +  HA V+K  ++    +G A++  Y   
Sbjct: 1052 LEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKC 1111

Query: 368  GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
            GE+ E +K    M ++   VSWN+ I+G+  N+   +A++    M++     D FT++++
Sbjct: 1112 GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATV 1171

Query: 428  LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
            L AC+ + +L    ++H+  +++  ES+V VGS+L++ Y+KCG  + A R F  +   +V
Sbjct: 1172 LSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 1231

Query: 488  VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN-STFLAVLSACSHSGLVQDGQKVFE 546
             SWNSMI  Y+++G   KA+ LF +M+++G  P + +  L VLSACSH G V++G + F+
Sbjct: 1232 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFK 1291

Query: 547  SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            SM + Y + P   H+SCMVDLLGRAGKL+    FI+++P+KP   IWR +  AC C ++ 
Sbjct: 1292 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGAC-CRANG 1350

Query: 607  KMAEF---ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            +  E     ++ +LEL+P +A  YV L+NMYA      D  + R  MK   + KE GCSW
Sbjct: 1351 RNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKEAGCSW 1410

Query: 664  IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVL 712
            + + + ++ F + +K H E   +Y+KL++L +++ D G+    K           E+ + 
Sbjct: 1411 VTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLS 1470

Query: 713  YHSERLAVGFGLI---SLPAK 730
            YHSE++AV F L    +LP +
Sbjct: 1471 YHSEKIAVAFVLTRQSALPIR 1491



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 226/462 (48%), Gaps = 31/462 (6%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           C+ T+  +  + ESL+++         C  EE  EL    H    K    G+ F++ +L+
Sbjct: 536 CNTTLFSSSETFESLINR-----YQGSCCSEEAREL----HLQSIKYGFVGNLFLSNTLI 586

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           N+Y + GD+ S   +  +M   ++ +  CL++GY +N   D+A + F  +      PNHY
Sbjct: 587 NIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHY 646

Query: 220 TYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC-GMMEDAESVF 276
            + + L  C     S    G Q+H    K +Y S   V N L++MY  C     DA SVF
Sbjct: 647 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 706

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI----DPNEYTF-TVALASCAS 331
           + +  RN ISW +II+ + + GD      L   M+++G+     PNEYTF ++  A+C+S
Sbjct: 707 DRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSS 766

Query: 332 LRNSHMGYMFHAQVIKR----GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +     G     Q++ R    G     +VG+A+V  ++  G   +AK   ++MG   + V
Sbjct: 767 V---DFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVR-NVV 822

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA----TCEQI 443
           S N  + G  + ++ E A + F +M ++    +  +Y  +L A S    L        ++
Sbjct: 823 SMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREV 881

Query: 444 HSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           H+ ++++    N V +G+ L+  Y K G+  DA  VF  +   D VSWNS+I    QN  
Sbjct: 882 HAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNEC 941

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           +  A   F +M   G  P+N T ++ LS+C+  G +  G+++
Sbjct: 942 SEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQI 983



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 202/423 (47%), Gaps = 8/423 (1%)

Query: 120  VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
            +I  LS C+    + LG + H    K  +  D  V+ +L+ +YA+ G     + V   MP
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023

Query: 180  YLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D  S N ++   + + A   QA  +FL++       +  T+  +L+   SLS  +   
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSH 1083

Query: 239  QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQH 297
            Q+HA  +K      TA+ NALL+ Y KCG M + E +F  + + R+ +SW ++I+G+  +
Sbjct: 1084 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 1143

Query: 298  GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
                K + LV  M + G   + +TF   L++CAS+     G   HA  I+  M     VG
Sbjct: 1144 ELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVG 1203

Query: 358  TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +A+VDMYS  G I +   +  E+    +  SWN+ I+G+ R+   E+A++ F++M+ +  
Sbjct: 1204 SALVDMYSKCGRI-DYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 1262

Query: 418  ACDEFT-YSSILKACSLLPSLATC-EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED- 474
              D       +L ACS +  +    E   S     +    V   S +++   + G  ++ 
Sbjct: 1263 PPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 1322

Query: 475  AERVFSQLTAADVVSWNSMIKAYSQ-NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
             + + S     +V+ W +++ A  + NGR  +      +M++E + P N+    +L+   
Sbjct: 1323 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE-LEPQNAVNYVLLANMY 1381

Query: 534  HSG 536
             SG
Sbjct: 1382 ASG 1384



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 7/228 (3%)

Query: 115  LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            L +   I +LS  S     E+  + HAL+ K  +  D  +  +L++ Y KCG++     +
Sbjct: 1061 LSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKI 1120

Query: 175  VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
              +M    D  S N +++GY  N L  +A      +     + + +T++T+L+ C S++ 
Sbjct: 1121 FARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVAT 1180

Query: 234  IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            ++ G ++HA  ++    S   V +AL+ MY KCG ++ A   FE +  RNV SW ++I+G
Sbjct: 1181 LERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISG 1240

Query: 294  FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA-LASCASLRNSHMGYM 340
            + +HG  EK L+L   M  DG  P+     +  L++C     SH+G++
Sbjct: 1241 YARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSAC-----SHVGFV 1283



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 7/182 (3%)

Query: 115  LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            LD      VLS C+    LE G   HA   +  +  D  V ++LV+MY+KCG I      
Sbjct: 1163 LDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRF 1222

Query: 175  VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM--LAICGSLS 232
             + MP  ++ S N +++GYA++   ++A   F ++  +D QP  +    +  L+ C  + 
Sbjct: 1223 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM-MLDGQPPDHVAPLLGVLSACSHVG 1281

Query: 233  AIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTA 289
             ++EG + H ++M   Y     V +   ++ +  + G +++       + ++ NV+ W  
Sbjct: 1282 FVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 1340

Query: 290  II 291
            ++
Sbjct: 1341 VL 1342


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 214/679 (31%), Positives = 340/679 (50%), Gaps = 61/679 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM---P 179
           VL  C        G   HA++  +    + FV   LV+MY +CG  ++   V  +M    
Sbjct: 151 VLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERG 210

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D+ S N ++A Y +     +A   F ++ + + ++P+  +   +L  C S+ A   GK
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   ++        V NA++ MY KCGMME+A  VFE +  ++V+SW A++ G+ Q G
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330

Query: 299 DYEKPLRLVCLMRED-----------------------------------GIDPNEYTFT 323
            ++  L L   +RE+                                   G +PN  T  
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMAL-----GD--FVGTAIVDMYSGLGEIWEAKKQ 376
             L+ CAS      G   H   IK  + L     GD   V  A++DMYS       A+  
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 377 LKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND--AACDEFTYSSILKACSL 433
              +  K  S V+W   I G  ++ +  EA+E FSQM++ D     + FT S  L AC+ 
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 434 LPSLATCEQIHSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
           L +L    QIH+ +++++FES  + V + LI+ Y+K G  + A  VF  +   + VSW S
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           ++  Y  +GR  +A+ +F +M    + P   TF+ VL ACSHSG+V  G   F  M K++
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G++P   HY+CMVDLL RAG+L+ A+  I  +P+KPT  +W  L +ACR ++++++ E+ 
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYA 690

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           + Q+LEL+  +   Y  LSN+YA A    D    R LMK   I K PGCSW++       
Sbjct: 691 ANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTAT 750

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           FF+ + SH    ++Y+ L+ LMQ+I+ +G+            D EK D +  HSE+LA+ 
Sbjct: 751 FFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALA 810

Query: 722 FGLISLPAKNKFECSRTLE 740
           +G+++         ++ L 
Sbjct: 811 YGILTTAPGAPIRITKNLR 829



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 214/486 (44%), Gaps = 54/486 (11%)

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
              +     + ++  +  +P+HYT+  +L  CG + +   G  +HA      +     V 
Sbjct: 124 GFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVG 183

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNV---ISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           N L++MY +CG  E+A  VF+ + +R V   +SW +I+  + Q GD  + +++   M ED
Sbjct: 184 NGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 243

Query: 314 -GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            GI P+  +    L +CAS+     G   H   ++ G+    FVG A+VDMY+  G + E
Sbjct: 244 LGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEE 303

Query: 373 AKKQLKEMGKSASSVSWNAQIAGF---------------FRNQKTE-------------- 403
           A K  + M K    VSWNA + G+                R +K E              
Sbjct: 304 ANKVFERM-KVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 362

Query: 404 ------EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE---- 453
                 EA++ F QM+   +  +  T  S+L  C+   +L   ++ H   +K        
Sbjct: 363 QRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422

Query: 454 ---SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD--VVSWNSMIKAYSQNGRARKAII 508
               ++ V ++LI+ Y+KC S + A  +F  +   D  VV+W  +I   +Q+G A +A+ 
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482

Query: 509 LFEKMVVEG--IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           LF +M+     + P   T    L AC+  G ++ G+++   +++           +C++D
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDA 624
           +  ++G ++ A +   N+  +     W  L      H   +  +  F   Q + L PD  
Sbjct: 543 MYSKSGDVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGV 601

Query: 625 AVYVTL 630
              V L
Sbjct: 602 TFVVVL 607



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 11/333 (3%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-- 279
           ST+   C SL++     +L  Q + +Q L        +++MY+       A SV   L  
Sbjct: 52  STLFHQCKSLAS----AELTHQQLLVQGLPHDPTH--IISMYLTFNSPAKALSVLRRLHP 105

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
               V  W  +I      G  E  L+L   M+  G  P+ YTF   L +C  + +   G 
Sbjct: 106 SSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGA 165

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS--VSWNAQIAGFF 397
             HA V   G     FVG  +V MY   G    A++   EM +      VSWN+ +A + 
Sbjct: 166 SVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYM 225

Query: 398 RNQKTEEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
           +   +  A++ F +M  +     D  +  ++L AC+ + + +  +Q+H   ++S    +V
Sbjct: 226 QGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDV 285

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            VG+++++ Y KCG  E+A +VF ++   DVVSWN+M+  YSQ GR   A+ LFEK+  E
Sbjct: 286 FVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREE 345

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
            I     T+ AV++  +  GL  +   VF  M+
Sbjct: 346 KIELNVVTWSAVIAGYAQRGLGFEALDVFRQML 378



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 209/474 (44%), Gaps = 81/474 (17%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  C+       G++ H    ++ +  D FV  ++V+MYAKCG ++    V 
Sbjct: 249 DAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVF 308

Query: 176 KQMPYLDIASCNCL-----------------------------------LAGYAKNALFD 200
           ++M   D+ S N +                                   +AGYA+  L  
Sbjct: 309 ERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGF 368

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKT------ 253
           +A   F ++     +PN  T  ++L+ C S   +  GK+ H   +K +  L +       
Sbjct: 369 EALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDL 428

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVC--L 309
            V NAL+ MY KC   + A ++F+ +    R+V++WT +I G  QHG+  + L L    L
Sbjct: 429 MVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML 488

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIVDMYSGLG 368
             ++ + PN +T + AL +CA L     G   HA V++ R  +   FV   ++DMYS  G
Sbjct: 489 QPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSG 548

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A+     M +  + VSW + + G+  + + EEA++ F +M +     D  T+  +L
Sbjct: 549 DVDAARVVFDNMHQR-NGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVL 607

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS           HS +V          G +     NK          F  +  A+  
Sbjct: 608 YACS-----------HSGMVDQ--------GINYFNGMNK---------DFGVVPGAE-- 637

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            +  M+   S+ GR  +A+ L   M    ++PT + ++A+LSAC     V+ G+
Sbjct: 638 HYACMVDLLSRAGRLDEAMELIRGMP---MKPTPAVWVALLSACRVYANVELGE 688


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 321/601 (53%), Gaps = 12/601 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + FV + L++ Y+ C  +     V   +   D      +++ Y++N   + AF  F K+ 
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               +PN +  +++L     L ++  GK +H   +K    ++  V  ALL MY KCG ++
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA   FE +   +VI  + +I+ + Q    E+   L   +    + PNEY+ +  L +C 
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           ++     G   H   IK G     FVG A++D Y+   ++  + K    + + A+ VSWN
Sbjct: 376 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSWN 434

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             + GF ++   EEA+  F +M      C + TYSS+L+AC+   S+    QIH  I KS
Sbjct: 435 TIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKS 494

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            F ++  +G+SLI+ Y KCG   DA +VF  L   D++SWN++I  Y+ +G+A  A+ LF
Sbjct: 495 TFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELF 554

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++M    +   + TF+A+LS CS +GLV  G  +F+SM  ++GI P   HY+C+V LLGR
Sbjct: 555 DRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGR 614

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG+L  AL FI ++P  P+A +WR L ++C  H ++ +  F +++ILE++P D   YV L
Sbjct: 615 AGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLL 674

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SNMYA AG        RK M+   + K PG SW+E+  +I+ F   +  H +M  +   L
Sbjct: 675 SNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML 734

Query: 691 KQLMQQ------IEDIG----HTDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
           + L  +      I DI       D E++ R+L+ HSERLA+ +GL+  P  +     + L
Sbjct: 735 EWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNL 794

Query: 740 E 740
            
Sbjct: 795 R 795



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 217/417 (52%), Gaps = 3/417 (0%)

Query: 136 GRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           GR  H  + +    G  D F    L+NMY K G + S   +  +MP  ++ S   L+  +
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+   F+ A + F +L     + N +  +TML +  ++ A      +H+   KL +    
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V + L+  Y  C ++ DAE VF G+V+++ + WTA+++ + ++   E   R+   MR  
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  PN +  T  L +   L +  +G   H   IK        VG A++DMY+  G+I +A
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +    EM      +  +  I+ + ++ + E+A E F +++R+    +E++ SS+L+AC+ 
Sbjct: 318 RLAF-EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 376

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +  L   +QIH+  +K   ES++ VG++L++ Y KC   + + ++FS L  A+ VSWN++
Sbjct: 377 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 436

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +  +SQ+G   +A+ +F +M    +  T  T+ +VL AC+ +  ++   ++  S+ K
Sbjct: 437 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 493


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/643 (31%), Positives = 336/643 (52%), Gaps = 55/643 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-----DIASCNCLLAGYAKNALFDQAFSF 205
           DQ    ++++ YA+ G  +       +M  L     ++ S   L+AG  +N    +A S 
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYI 264
           F K+    V+PN  T ++ ++ C +LS +  G+++H   +K++ L S   V N+L+  Y 
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409

Query: 265 KC----------GMMEDAESV--------------------------FEGLVQRNVISWT 288
           KC          GM++  + V                          F+G ++ ++I+W 
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-IEPDIITWN 468

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            ++ GF Q+GD +  L     M   G+DPN  T + ALA+C  +RN  +G   H  V++ 
Sbjct: 469 GLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN 528

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
            + L   VG+A++ MYSG   +  A     E+  +   V WN+ I+   ++ ++  A++ 
Sbjct: 529 HIELSTGVGSALISMYSGCDSLEVACSVFSEL-STRDVVVWNSIISACAQSGRSVNALDL 587

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             +M  ++   +  T  S L ACS L +L   ++IH  I++   ++   + +SLI+ Y +
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGR 647

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CGS + + R+F  +   D+VSWN MI  Y  +G    A+ LF++    G++P + TF  +
Sbjct: 648 CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNL 707

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACSHSGL+++G K F+ M  EY + P    Y+CMVDLL RAG+    L FI  +P +P
Sbjct: 708 LSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP 767

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
            A +W  L  ACR H +  +AE+ ++ + EL+P  +  YV ++N+Y+ AG   DA + R 
Sbjct: 768 NAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 827

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
           LMK + ++K PGCSWIEV  K++ F   + SH  M ++  K++ L   I++IG+      
Sbjct: 828 LMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNF 887

Query: 704 ------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                 ++EKE  +  HSE++A+ FGLIS  A       + L 
Sbjct: 888 VLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLR 930



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 208/460 (45%), Gaps = 41/460 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C +   L LG + HA +    V   +F+ + L+ +Y + G ++    +  +M   +
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++  Y     +++    F  +    V+P+H+ +  +   C  L     GK ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             + + +   + V  ++L M+IKCG M+ A   FE +  ++V  W  +++G+   G+++K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+ +  M+  G+ P++ T+                                    AI+ 
Sbjct: 275 ALKCISDMKLSGVKPDQVTW-----------------------------------NAIIS 299

Query: 363 MYSGLGEIWEAKKQLKEMGK----SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            Y+  G+  EA K   EMG       + VSW A IAG  +N    EA+  F +MV     
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAER 477
            +  T +S + AC+ L  L    +IH   +K  + +S++ VG+SL++ Y KC S E A R
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F  +   D+VSWN+M+  Y+  G   +AI L  +M  +GI P   T+  +++  +  G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            +   + F+ M    G+ P     S  +   G+   L++ 
Sbjct: 480 GKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLG 518



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 270/627 (43%), Gaps = 95/627 (15%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E +    FV  +V   CS  +   +G+  +  +      G+  V  S+++M+ KCG +  
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAIC 228
                +++ + D+   N +++GY     F +A      +KL G  V+P+  T+       
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG--VKPDQVTW------- 294

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---EGL--VQRN 283
                                       NA+++ Y + G  E+A   F    GL   + N
Sbjct: 295 ----------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPN 326

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SWTA+I G +Q+G   + L +   M  +G+ PN  T   A+++C +L     G   H 
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386

Query: 344 QVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
             IK      D  VG ++VD Y+    +  A+++   M K    VSWNA +AG+      
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG-MIKQTDLVSWNAMLAGYALRGSH 445

Query: 403 EEAIE----------------------AFSQMVRNDAACDEF-------------TYSSI 427
           EEAIE                       F+Q     AA + F             T S  
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L AC  + +L   ++IH  ++++  E +  VGS+LI  Y+ C S E A  VFS+L+  DV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           V WNS+I A +Q+GR+  A+ L  +M +  +     T ++ L ACS    ++ G+++ + 
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           +++  G+       + ++D+ GR G ++ +      +P +     W  + +    H    
Sbjct: 626 IIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS-WNVMISVYGMHGFGM 683

Query: 608 MAEFISKQI--LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM--KEISKEPGCSW 663
            A  + +Q   + L P+    ++T +N+ +        EE  K  KM   E + +P    
Sbjct: 684 DAVNLFQQFRTMGLKPN----HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPA--- 736

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           +E Y  +    S+    +E  +  EK+
Sbjct: 737 VEQYACMVDLLSRAGQFNETLEFIEKM 763



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 228/586 (38%), Gaps = 97/586 (16%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           +   +S C+    L  GR  H    K   +  D  V  SLV+ YAKC  ++        +
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMI 424

Query: 179 PYLDIASCNCLLAGYAK--------------------------NAL---FDQ------AF 203
              D+ S N +LAGYA                           N L   F Q      A 
Sbjct: 425 KQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAAL 484

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
            FF ++  + + PN  T S  LA CG +  +  GK++H   ++      T V +AL++MY
Sbjct: 485 EFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMY 544

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
             C  +E A SVF  L  R+V+ W +II+   Q G     L L+  M    ++ N  T  
Sbjct: 545 SGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMV 604

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
            AL +C+ L     G   H  +I+ G+   +F+  +++DMY   G I ++++    M + 
Sbjct: 605 SALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQR 664

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS----------- 432
              VSWN  I+ +  +    +A+  F Q        +  T++++L ACS           
Sbjct: 665 -DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKY 723

Query: 433 ----------------------LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN-KC 469
                                 LL       +    I K  FE N  V  SL+ A    C
Sbjct: 724 FKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHC 783

Query: 470 GS--WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI-RPTNSTFL 526
                E A R   +L      ++  M   YS  GR   A  +   M   G+ +P   +++
Sbjct: 784 NPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843

Query: 527 A--------VLSACSHSGLVQDGQKVFESM---VKEYGILPEEAHYSCMVD-------LL 568
                    V+   SH  + Q   K+ ES+   +KE G +P+       VD       L 
Sbjct: 844 EVKRKLHSFVVGDTSHPLMEQISAKM-ESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLC 902

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           G + K+ +A   IS     P   I + L     CHS  K   FISK
Sbjct: 903 GHSEKIALAFGLISTTAGTPLRII-KNLRVCGDCHSATK---FISK 944



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 23/419 (5%)

Query: 291 INGFKQHGDYEKPLRL----VCLMREDGIDPNE--YTFTVALASCASLRNSHMGYMFHAQ 344
           I GF   G   +   L    + L   D  +P+E    +   L  C  L N  +G+  HAQ
Sbjct: 55  ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           ++  G+ + +F+G+ ++++Y   G + +A++   +M +  +  SW A +  +      EE
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER-NVFSWTAIMEMYCGLGDYEE 173

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
            I+ F  MV      D F +  + KACS L +    + ++  ++   FE N  V  S+++
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 233

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            + KCG  + A R F ++   DV  WN M+  Y+  G  +KA+     M + G++P   T
Sbjct: 234 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           + A++S  + SG  ++  K F  M       P    ++ ++    + G    AL     +
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353

Query: 585 ---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGL 639
               +KP +       +AC   S L+    I    ++++  D+ + V  +L + YA+   
Sbjct: 354 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 413

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              A  +  ++K  ++      SW    N +   ++   SH E  ++  ++K   Q IE
Sbjct: 414 VEVARRKFGMIKQTDL-----VSW----NAMLAGYALRGSHEEAIELLSEMK--FQGIE 461


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/652 (30%), Positives = 353/652 (54%), Gaps = 48/652 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+ C R   LELG + HA++ K       FV+ +L+ +Y KCG + S++ +  +MP+
Sbjct: 175 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 234

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQ 239
            DIAS N +++   K  ++++AF  F  +  ID  + +H+T ST+L     L+++  G++
Sbjct: 235 RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGRE 293

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT----------- 288
           +HA  +K+ + S  +V NAL+  Y KCG ++   ++FE +  R+VI+WT           
Sbjct: 294 IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGL 353

Query: 289 --------------------AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
                               AI++GF Q+G+  K L   C M E+G++  ++T T  L +
Sbjct: 354 TDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNA 413

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-V 387
           C  L  + +    H  ++K G      +  A++DM +  G + +A+K   +   S S  +
Sbjct: 414 CGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSI 473

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQ-MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
            W + I G+ RN + EEAI  F Q  +      D+   +++L  C  L      +QIH  
Sbjct: 474 IWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCH 533

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +KS F S++ VG+S+I  Y+KC + +DA +VF+ + A D+VSWN +I  +  + +  +A
Sbjct: 534 ALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEA 593

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSH--SGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           + ++ KM   GI+P   TF+ ++SA  H  S LV + +++F SM   Y I P   HY+ +
Sbjct: 594 LSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSL 653

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           V +LG  G LE A   I+ +PI+P A +WR L  ACR HS+  + +  +K +L + P D 
Sbjct: 654 VGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDP 713

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           + Y+ +SN+Y+  G    ++  R+ M++K   K PG SWI   NK++ F++++KSH +  
Sbjct: 714 STYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAK 773

Query: 685 KVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
            ++  L+ L+ +    G+            +++K+D + YHS ++A  +GL+
Sbjct: 774 DIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLL 825



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 257/571 (45%), Gaps = 46/571 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L    R + +EL +  HA I K A   D  +  +L+  Y K G + +   V   +   +
Sbjct: 78  LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 135

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++G+AK+    QA   F ++    ++ N +++  +L +C  L  ++ G QLHA
Sbjct: 136 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 195

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+ +L+ T VSNAL+ +Y KCG ++    +F+ +  R++ SW  +I+   +   YE+
Sbjct: 196 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 255

Query: 303 PLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
              L   MR  DG   + +T +  L +   L  S +G   HA VIK G      V  A++
Sbjct: 256 AFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGREIHAHVIKIGFESNISVINALI 314

Query: 362 DMYSGLGEI-----------------W-EAKKQLKEMG------------KSASSVSWNA 391
             Y+  G I                 W E      E G             + +S+S+NA
Sbjct: 315 RFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 374

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            ++GF +N +  +A+  F +MV       +FT + +L AC LL      +QIH  I+K  
Sbjct: 375 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 434

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERV--FSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           F SN  + ++L++   +CG   DA+++      + +  + W SMI  Y++N +  +AI L
Sbjct: 435 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 494

Query: 510 FEKMVVEG---IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           F +  +EG   +    ST  AVL  C      + G+++    +K  G L +    + ++ 
Sbjct: 495 FCQSQLEGAMVVDKVAST--AVLGVCGTLAFHEMGKQIHCHALKS-GFLSDLGVGNSIIT 551

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDA 624
           +  +   ++ A+   + +P       W  L A    H   D  ++ +   +   + P D 
Sbjct: 552 MYSKCSNMDDAIKVFNVMPAHDIVS-WNGLIAGHLLHRQGDEALSVWSKMEKAGIKP-DT 609

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
             +V + + Y           +R  + MK I
Sbjct: 610 VTFVLIISAYRHTNSNLVDNCRRLFLSMKTI 640



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 203/489 (41%), Gaps = 63/489 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGF-IDDGCSNTVP 105
           S  QLF++ P R   S + +I +    ++E    R     R+    DGF ID    +T+ 
Sbjct: 224 SVLQLFDEMPHRDIASWNTVISS---VVKEMMYERAFELFRDMRRIDGFRIDHFTLSTIL 280

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V    L S++                    GR  HA + K     +  V  +L+  Y KC
Sbjct: 281 VAARGLASMV--------------------GREIHAHVIKIGFESNISVINALIRFYTKC 320

Query: 166 GDIKSMVA-------------------------------VVKQMPYLDIASCNCLLAGYA 194
           G IK +VA                               V  +MP  +  S N +L+G+ 
Sbjct: 321 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 380

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N    +A +FF ++    V+   +T + +L  CG L      KQ+H   +K  + S   
Sbjct: 381 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 440

Query: 255 VSNALLTMYIKCGMMEDAESV--FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           +  ALL M  +CG M DA+ +       Q   I WT++I G+ ++   E+ + L C  + 
Sbjct: 441 IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQL 500

Query: 313 DG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           +G +  ++   T  L  C +L    MG   H   +K G      VG +I+ MYS    + 
Sbjct: 501 EGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMD 560

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A K    M  +   VSWN  IAG   +++ +EA+  +S+M +     D  T+  I+ A 
Sbjct: 561 DAIKVFNVM-PAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAY 619

Query: 432 SLLPS--LATCEQIH-SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
               S  +  C ++  S       +  V   +SL+      G  E+AE + +++      
Sbjct: 620 RHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEA 679

Query: 489 S-WNSMIKA 496
           S W +++ A
Sbjct: 680 SVWRALLDA 688



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 20/257 (7%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + +H+ I K     ++H+ ++LI AY K G   +A +VF  L+  +VVS+ +MI  ++++
Sbjct: 92  KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 149

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
            R R+A+ +F +M   GI     +F+A+L+ C     ++ G ++  ++V + G L     
Sbjct: 150 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQL-HAIVIKMGFLNYTFV 208

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + ++ L G+ G L+  L     +P +  A  W  + ++        + E + ++  EL 
Sbjct: 209 SNALMGLYGKCGYLDSVLQLFDEMPHRDIAS-WNTVISSV-------VKEMMYERAFELF 260

Query: 621 PDDAAV------YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            D   +      + TLS +   A   A    +     + +I  E   S I V N + RF+
Sbjct: 261 RDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFE---SNISVINALIRFY 317

Query: 675 SQNKSHSEMPKVYEKLK 691
           ++  S   +  ++EK++
Sbjct: 318 TKCGSIKHVVALFEKMR 334


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 208/625 (33%), Positives = 330/625 (52%), Gaps = 25/625 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++  LS C++   +   R  H+++ ++ +     V+ +L + YA+ G +     V  +  
Sbjct: 231 LVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAA 287

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S N +L  YA++    +A   F ++    + P+  T       C SL     G+ 
Sbjct: 288 ERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF---GRM 344

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  ++        + NALL MY +CG  E+A  +FEG +  N +SW  +I G  Q G 
Sbjct: 345 IHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG-IPGNAVSWNTMIAGSSQKGQ 403

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCAS----LRNSHMGYMFHAQVIKRGMALGDF 355
            ++ L L   M+ +G+ P   T+   L + AS     R    G   H++++  G A    
Sbjct: 404 MKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPA 463

Query: 356 VGTAIVDMYSGLGEIWEAKK--QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           +GTA+V MY+  G I EA    Q   M      VSWNA I+   ++   + A+  F +M 
Sbjct: 464 IGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMD 523

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +  A ++ T  ++L AC+   +L     +H  +  S  ESNV V ++L   Y +CGS E
Sbjct: 524 LHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLE 583

Query: 474 DAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            A  +F ++    DVV +N+MI AYSQNG A +A+ LF +M  EG RP   +F++VLSAC
Sbjct: 584 SAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSAC 643

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH GL  +G ++F SM + YGI P E HY+C VD+LGRAG L  A   I  + +KPT  +
Sbjct: 644 SHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLV 703

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W+ L  ACR + D+      +  + ELDP D + YV LSN+ A AG   +A E R  M+ 
Sbjct: 704 WKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMES 763

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
           + + K+ G SWIE+ ++++ F + ++SH    ++Y +L++L  +I +IG+          
Sbjct: 764 RGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRK 823

Query: 704 --DNEKEDRVLYHSERLAVGFGLIS 726
             + EKE  +  HSERLA+  G++S
Sbjct: 824 VDEAEKERLLCQHSERLAIALGVMS 848



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 247/491 (50%), Gaps = 17/491 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + VL  C+R   L  GR  HA I ++ + G   +   L+++Y  CG + S + + 
Sbjct: 127 DAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLF 186

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++M   D+ S N  +A  A++   D A   F ++    V+P   T    L++C   + I 
Sbjct: 187 ERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVC---AKIR 242

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           + + +H+   +        VS AL + Y + G ++ A+ VF+   +R+V+SW A++  + 
Sbjct: 243 QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYA 302

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QHG   +   L   M  +GI P++ T   A   C+SLR    G M HA  +++G+     
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLR---FGRMIHACALEKGLDRDIV 359

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +G A++DMY+  G   EA+   +  G   ++VSWN  IAG  +  + + A+E F +M   
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFE--GIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLE 417

Query: 416 DAACDEFTYSSILKACSLLP----SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
             A    TY ++L+A +  P    ++A   ++HSRIV   + S   +G+++++ Y  CG+
Sbjct: 418 GMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGA 477

Query: 472 WEDAERVFSQLTAA---DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            ++A   F +       DVVSWN++I + SQ+G  ++A+  F +M + G+ P   T +AV
Sbjct: 478 IDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAV 537

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L AC+ +  + +G  V + + +  G+       + +  + GR G LE A      + ++ 
Sbjct: 538 LDACAGAAALTEGVIVHDHL-RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596

Query: 589 TAPIWRPLFAA 599
              I+  + AA
Sbjct: 597 DVVIFNAMIAA 607



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/614 (23%), Positives = 279/614 (45%), Gaps = 60/614 (9%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L     +  L  GRR HA I    +  ++ +   L+ +Y KC  +  +  V  ++ 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D AS   ++  Y ++    +A   F ++    V+ +  T+  +L  C  L  + +G+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  ++     K+ ++N LL +Y  CG +  A  +FE + +R+++SW A I    Q GD
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            +  L L   M+ +G+ P   T  + L+ CA +R +      H+ V + G+     V TA
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAKIRQAR---AIHSIVRESGLEQTLVVSTA 265

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +   Y+ LG + +AK+      +    VSWNA +  + ++    EA   F++M+      
Sbjct: 266 LASAYARLGHLDQAKEVFDRAAER-DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPP 324

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            + T  +    CS   SL     IH+  ++   + ++ +G++L++ Y +CGS E+A  +F
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS------ 533
             +   + VSWN+MI   SQ G+ ++A+ LF++M +EG+ P  +T+L +L A +      
Sbjct: 382 EGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440

Query: 534 ---------HSGLVQDG----QKVFESMVKEY---GILPEEA---------------HYS 562
                    HS +V  G      +  ++VK Y   G + E A                ++
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRCHSDLKMAEFISKQILEL 619
            ++  L + G  + AL F   + +   AP       +  AC   + L     +   +   
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS 560

Query: 620 DPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
             + +  V   L++MY   G     E  R++ +   + ++     + ++N +   +SQN 
Sbjct: 561 GMESNVFVATALASMYGRCG---SLESAREIFEKVAVERD-----VVIFNAMIAAYSQNG 612

Query: 679 SHSEMPKVYEKLKQ 692
              E  K++ +++Q
Sbjct: 613 LAGEALKLFWRMQQ 626


>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
 gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 188/548 (34%), Positives = 305/548 (55%), Gaps = 2/548 (0%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHY 219
           MYAK G +     +  +MP  D  S N +++G+ K+  FD  F FF ++  +   + +  
Sbjct: 1   MYAKNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQA 60

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T +T+L+ C         K +H   +   +  + +V NAL+T Y KCG       VF+ +
Sbjct: 61  TLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEM 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           ++RNVI+WTAII+G  Q   Y   LRL   M    ++PN  T+  +L +C+ L+    G 
Sbjct: 121 LERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGC 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H +V K G+     V +A++DMYS  G + +   Q+ E       VS    +AGF +N
Sbjct: 181 QIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTL-QIFESAGQLDKVSMTIILAGFAQN 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              EEA++ F +M+      D    S++L       SL   +QIHS ++K  F SN  VG
Sbjct: 240 GFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVG 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + LI  Y+KCG  ED+ +VFS++   + VSWNSMI A++++G   +A+ L+++M ++G+ 
Sbjct: 300 NGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVE 359

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           PT+ TFL++L ACSH GLV+ G +  +SM + + + P   HY+C+VD+LGRAG L  A  
Sbjct: 360 PTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKT 419

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           FI  LPIKP   +W+ L  AC  H D +M ++ ++ ++   P+  + Y+ L+N+Y+  G 
Sbjct: 420 FIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSKGR 479

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             +  +  K MK   ++KE G SWIE+ N ++ F  ++K H +   +Y  L +L   + D
Sbjct: 480 WKERAKTIKRMKEMCVAKETGISWIEIENNLHSFVVEDKMHPQAEIIYGVLAELFGHMID 539

Query: 700 IGHTDNEK 707
            G+  +++
Sbjct: 540 EGYVPDKR 547



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 193/414 (46%), Gaps = 7/414 (1%)

Query: 94  GFIDDGCSNTVPVTCYSLESL----LDKQFVIEVLSYCSREECLELGRRYHALITKTAVC 149
           GF+ DG  +        ++SL    LD+  +  +LS C R E   + +  H L       
Sbjct: 32  GFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLAVLNGFQ 91

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            +  V  +L+  Y KCG   S + V  +M   ++ +   +++G  ++ L+  +   F+++
Sbjct: 92  REISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEM 151

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               V+PN  TY + L  C  L A+ EG Q+H +  KL   S   V +AL+ MY KCG M
Sbjct: 152 TNGLVEPNSLTYLSSLMACSGLQALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSM 211

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            D   +FE   Q + +S T I+ GF Q+G  E+ ++    M E G + +    +  L   
Sbjct: 212 GDTLQIFESAGQLDKVSMTIILAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVF 271

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            +  +  +G   H+ VIKR      FVG  +++MYS  G++ ++ K    M    +SVSW
Sbjct: 272 GADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRM-PCMNSVSW 330

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIV 448
           N+ IA F R+     A++ + +M        + T+ S+L ACS +  +    E + S   
Sbjct: 331 NSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTE 390

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNG 501
             K    +   + +++   + G   +A+     L    DV+ W +++ A   +G
Sbjct: 391 VHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHG 444


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/652 (30%), Positives = 353/652 (54%), Gaps = 48/652 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L+ C R   LELG + HA++ K       FV+ +L+ +Y KCG + S++ +  +MP+
Sbjct: 193 VAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPH 252

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQ 239
            DIAS N +++   K  ++++AF  F  +  ID  + +H+T ST+L     L+++  G++
Sbjct: 253 RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASM-VGRE 311

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT----------- 288
           +HA  +K+ + S  +V NAL+  Y KCG ++   ++FE +  R+VI+WT           
Sbjct: 312 IHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGL 371

Query: 289 --------------------AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
                               AI++GF Q+G+  K L   C M E+G++  ++T T  L +
Sbjct: 372 TDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNA 431

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-V 387
           C  L  + +    H  ++K G      +  A++DM +  G + +A+K   +   S S  +
Sbjct: 432 CGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSI 491

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQ-MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
            W + I G+ RN + EEAI  F Q  +      D+   +++L  C  L      +QIH  
Sbjct: 492 IWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCH 551

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +KS F S++ VG+S+I  Y+KC + +DA +VF+ + A D+VSWN +I  +  + +  +A
Sbjct: 552 ALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEA 611

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSH--SGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           + ++ KM   GI+P   TF+ ++SA  H  S LV + +++F SM   Y I P   HY+ +
Sbjct: 612 LSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSL 671

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           V +LG  G LE A   I+ +PI+P A +WR L  ACR HS+  + +  +K +L + P D 
Sbjct: 672 VGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDP 731

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           + Y+ +SN+Y+  G    ++  R+ M++K   K PG SWI   NK++ F++++KSH +  
Sbjct: 732 STYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAK 791

Query: 685 KVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
            ++  L+ L+ +    G+            +++K+D + YHS ++A  +GL+
Sbjct: 792 DIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLL 843



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 257/571 (45%), Gaps = 46/571 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L    R + +EL +  HA I K A   D  +  +L+  Y K G + +   V   +   +
Sbjct: 96  LLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPN 153

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++G+AK+    QA   F ++    ++ N +++  +L +C  L  ++ G QLHA
Sbjct: 154 VVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHA 213

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K+ +L+ T VSNAL+ +Y KCG ++    +F+ +  R++ SW  +I+   +   YE+
Sbjct: 214 IVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYER 273

Query: 303 PLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
              L   MR  DG   + +T +  L +   L  S +G   HA VIK G      V  A++
Sbjct: 274 AFELFRDMRRIDGFRIDHFTLSTILVAARGLA-SMVGREIHAHVIKIGFESNISVINALI 332

Query: 362 DMYSGLGEI-----------------W-EAKKQLKEMG------------KSASSVSWNA 391
             Y+  G I                 W E      E G             + +S+S+NA
Sbjct: 333 RFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNA 392

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            ++GF +N +  +A+  F +MV       +FT + +L AC LL      +QIH  I+K  
Sbjct: 393 ILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFG 452

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERV--FSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           F SN  + ++L++   +CG   DA+++      + +  + W SMI  Y++N +  +AI L
Sbjct: 453 FGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISL 512

Query: 510 FEKMVVEG---IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           F +  +EG   +    ST  AVL  C      + G+++    +K  G L +    + ++ 
Sbjct: 513 FCQSQLEGAMVVDKVAST--AVLGVCGTLAFHEMGKQIHCHALKS-GFLSDLGVGNSIIT 569

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDA 624
           +  +   ++ A+   + +P       W  L A    H   D  ++ +   +   + P D 
Sbjct: 570 MYSKCSNMDDAIKVFNVMPAHDIVS-WNGLIAGHLLHRQGDEALSVWSKMEKAGIKP-DT 627

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
             +V + + Y           +R  + MK I
Sbjct: 628 VTFVLIISAYRHTNSNLVDNCRRLFLSMKTI 658



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 122/489 (24%), Positives = 203/489 (41%), Gaps = 63/489 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGF-IDDGCSNTVP 105
           S  QLF++ P R   S + +I +    ++E    R     R+    DGF ID    +T+ 
Sbjct: 242 SVLQLFDEMPHRDIASWNTVISS---VVKEMMYERAFELFRDMRRIDGFRIDHFTLSTIL 298

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V    L S++                    GR  HA + K     +  V  +L+  Y KC
Sbjct: 299 VAARGLASMV--------------------GREIHAHVIKIGFESNISVINALIRFYTKC 338

Query: 166 GDIKSMVA-------------------------------VVKQMPYLDIASCNCLLAGYA 194
           G IK +VA                               V  +MP  +  S N +L+G+ 
Sbjct: 339 GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFC 398

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N    +A +FF ++    V+   +T + +L  CG L      KQ+H   +K  + S   
Sbjct: 399 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 458

Query: 255 VSNALLTMYIKCGMMEDAESV--FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           +  ALL M  +CG M DA+ +       Q   I WT++I G+ ++   E+ + L C  + 
Sbjct: 459 IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQL 518

Query: 313 DG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           +G +  ++   T  L  C +L    MG   H   +K G      VG +I+ MYS    + 
Sbjct: 519 EGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMD 578

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A K    M  +   VSWN  IAG   +++ +EA+  +S+M +     D  T+  I+ A 
Sbjct: 579 DAIKVFNVM-PAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAY 637

Query: 432 SLLPS--LATCEQIH-SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
               S  +  C ++  S       +  V   +SL+      G  E+AE + +++      
Sbjct: 638 RHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEA 697

Query: 489 S-WNSMIKA 496
           S W +++ A
Sbjct: 698 SVWRALLDA 706



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 124/257 (48%), Gaps = 20/257 (7%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + +H+ I K     ++H+ ++LI AY K G   +A +VF  L+  +VVS+ +MI  ++++
Sbjct: 110 KAVHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKS 167

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
            R R+A+ +F +M   GI     +F+A+L+ C     ++ G ++  ++V + G L     
Sbjct: 168 NRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQL-HAIVIKMGFLNYTFV 226

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + ++ L G+ G L+  L     +P +  A  W  + ++        + E + ++  EL 
Sbjct: 227 SNALMGLYGKCGYLDSVLQLFDEMPHRDIAS-WNTVISSV-------VKEMMYERAFELF 278

Query: 621 PDDAAV------YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            D   +      + TLS +   A   A    +     + +I  E   S I V N + RF+
Sbjct: 279 RDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFE---SNISVINALIRFY 335

Query: 675 SQNKSHSEMPKVYEKLK 691
           ++  S   +  ++EK++
Sbjct: 336 TKCGSIKHVVALFEKMR 352


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 209/647 (32%), Positives = 351/647 (54%), Gaps = 42/647 (6%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKT--AVCGDQFVTASLVNMYAKCGDIKS 170
           +L D  F+      C++++ ++ G   H  I      +  D F+T +L+NMY KCG +  
Sbjct: 77  TLQDYAFLFHA---CAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDY 133

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              +  QMP  +  S   L++GYA+  L  + F+ F  +     +PN + ++++L  C  
Sbjct: 134 ARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGMLAC-FRPNEFAFASVLCACEE 192

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG---------MMEDAESVFEGLVQ 281
              +  G Q+HA  +K+       V+NAL+TMY KC            +DA  VF+ +  
Sbjct: 193 -QDVKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEY 251

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS---CAS----LRN 334
           RN+ISW ++I+GF+  G  +K + L   M  +GI  N  T    L+S   C S    + N
Sbjct: 252 RNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINN 311

Query: 335 SHM---GYMFHAQVIKRGMALGDFVGTAIVDMYSGLG-EIWEAKKQLKEMGKSASSVSWN 390
           +H     +  H   +K G+     V TA+V  Y+ LG  I +  K   +       VSW 
Sbjct: 312 THHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWT 371

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I   F  +  E+A   F Q+ R +   D  T+S  LKAC+   +     ++HS+++K 
Sbjct: 372 A-IISVFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQ 430

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            F ++  V ++LI AY + GS   +E+VF+++   D+VSWNSM+K+Y+ +GRA+ A+ LF
Sbjct: 431 GFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLF 490

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++M    + P ++TF+A+L+ACSH+GLV++G ++F SM + +GI P   HYSCMVDL GR
Sbjct: 491 KQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGR 547

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AGK+  A   I  +P+KP + IW  L  +CR H +  +A+  + +   LDP ++  Y+ +
Sbjct: 548 AGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQM 607

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+Y+  G   +A   RK M+  ++ K PG SW+EV  +++ F S  + H +   +  +L
Sbjct: 608 SNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRL 667

Query: 691 KQLMQQIEDIGHTD-----------NEKEDRVLYHSERLAVGFGLIS 726
           + L+ Q++++G+                ED++ +HSE++A+ F +++
Sbjct: 668 ETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMN 714


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 331/612 (54%), Gaps = 12/612 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA   K     + FV  +L++ Y+ CG +     V   +   D  +   +++ Y++N + 
Sbjct: 171 HACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIP 230

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A + F K+     +PN +  ++ L     LS+   GK +H  ++K  Y ++  V  AL
Sbjct: 231 EYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGAL 290

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG +EDA ++FE +   +VI W+ +I+ + Q    E+   +   M    + PNE
Sbjct: 291 LDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNE 350

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           ++ +  L +CA++    +G   H   IK G     FVG A++DMY+    + E   ++  
Sbjct: 351 FSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNM-ENSLEIFS 409

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
             + A+ VSWN  I G+ ++   E+A+  F +M        + T+SS+L+AC+   S+  
Sbjct: 410 SLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKH 469

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             QIHS I KS F ++  V +SLI+ Y KCG   DA +VF  +   DVVSWNS+I AY+ 
Sbjct: 470 AVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYAL 529

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +GRA  A+ LF++M    I+  + TF+++LS C  +GLV  G  +F SM+ ++ I P   
Sbjct: 530 HGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSME 589

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+C+V LLGRAG+L  AL FI ++P  P+  +WR L ++C  H ++ +  + ++++L++
Sbjct: 590 HYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDI 649

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P D   YV LSNMYA AG+  +    RK M+   + KE G SW+E+  +++ F   +  
Sbjct: 650 EPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSAD 709

Query: 680 HSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLP 728
           H +M  +   L+ L  +    G+           D E++ R+L+ HSERLA+ +GL   P
Sbjct: 710 HPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTP 769

Query: 729 AKNKFECSRTLE 740
             +     + L 
Sbjct: 770 PGHPIRIMKNLR 781



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 232/466 (49%), Gaps = 4/466 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMV 172
           LD       L  C        GR  HA + +       D F    L+N YAK G + +  
Sbjct: 43  LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +   MP  +  S   L+ GYA    F++A   F +L     + NH+  +T+L +  ++ 
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMD 162

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A      +HA   KL +     V  AL+  Y  CG +  A  VF+G+V ++ ++WTA+++
Sbjct: 163 APGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVS 222

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + ++   E  L     MR  G  PN +  T AL +   L ++ +G   H   +K     
Sbjct: 223 CYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDT 282

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              VG A++DMY+  G+I E    + EM      + W+  I+ + ++ + E+A E F +M
Sbjct: 283 EPHVGGALLDMYAKCGDI-EDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRM 341

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +R+    +EF+ S +L+AC+ +  L   EQIH+  +K  +ES + VG++L++ Y KC + 
Sbjct: 342 MRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNM 401

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E++  +FS L  A+ VSWN++I  Y Q+G A  A+ +F +M    +  T  TF +VL AC
Sbjct: 402 ENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRAC 461

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +++  ++   ++  S++++     +    + ++D   + G +  AL
Sbjct: 462 ANTSSIKHAVQI-HSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDAL 506



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 158/297 (53%), Gaps = 1/297 (0%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG+  H    KT    +  V  +L++MYAKCGDI+   A+ + +P+ D+   + L++ YA
Sbjct: 267 LGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYA 326

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++   +QAF  FL++    V PN ++ S +L  C +++ ++ G+Q+H   +KL Y S+  
Sbjct: 327 QSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELF 386

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V NAL+ MY KC  ME++  +F  L   N +SW  II G+ Q G  E  L +   MR   
Sbjct: 387 VGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAH 446

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +   + TF+  L +CA+  +       H+ + K        V  +++D Y+  G I +A 
Sbjct: 447 MLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDAL 506

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           K  + + +    VSWN+ I+ +  + +   A+E F +M ++D   ++ T+ S+L  C
Sbjct: 507 KVFESIVE-CDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVC 562



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 138/273 (50%), Gaps = 1/273 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    LELG + H L  K     + FV  +L++MYAKC ++++ + +   +   +
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++ GY ++   + A S F ++    +     T+S++L  C + S+I    Q+H+
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  + + T V N+L+  Y KCG + DA  VFE +V+ +V+SW +II+ +  HG    
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATN 535

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG-YMFHAQVIKRGMALGDFVGTAIV 361
            L L   M +  I  N+ TF   L+ C S    + G ++F++ ++   +       T IV
Sbjct: 536 ALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIV 595

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +    G + +A K + ++  + S + W A ++
Sbjct: 596 RLLGRAGRLTDALKFIGDIPSTPSPMVWRALLS 628


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 195/567 (34%), Positives = 325/567 (57%), Gaps = 6/567 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LGR  H L+ K+    D  V +SLV MYAK    ++ + V  +MP  D+AS N +++ + 
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++   ++A   F +++    +PN  + +  ++ C  L  ++ GK++H + +K  +     
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V++AL+ MY KC  +E A  VF+ + ++++++W ++I G+   GD +  + ++  M  +G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             P++ T T  L +C+  RN   G   H  VI+  +    +V  +++D+Y   GE   A+
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               +  K  +  SWN  I+ +       +A+E + QMV      D  T++S+L ACS L
Sbjct: 365 TVFSKTQKDVAE-SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L   +QIH  I +S+ E++  + S+L++ Y+KCG+ ++A R+F+ +   DVVSW  MI
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY  +G+ R+A+  F++M   G++P   T LAVLSAC H+GL+ +G K F  M  +YGI
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLFAACRCHSDLKMAEFIS 613
            P   HYSCM+D+LGRAG+L  A   I   P     A +   LF+AC  H +  + + I+
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE--ISKEPGCSWIEVYNKIY 671
           + ++E  PDDA+ Y+ L N+YA +G   DA  + +L KMKE  + K+PGCSWIE+ +K+ 
Sbjct: 604 RLLVENYPDDASTYMVLFNLYA-SGESWDAARRVRL-KMKEMGLRKKPGCSWIEMSDKVC 661

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            FF++++SH     VYE L  L   +E
Sbjct: 662 HFFAEDRSHLRAENVYECLALLSGHME 688



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 254/497 (51%), Gaps = 9/497 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-DIASCNCLLAGYAKNAL 198
           H  I    +  D  +  SL+N+Y  C D  S   V +      D+   N L++GY+KN++
Sbjct: 27  HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86

Query: 199 FDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
           F      F +L    +  P+ +T+  ++   G+L     G+ +H   +K  Y+    V++
Sbjct: 87  FHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVAS 146

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           +L+ MY K  + E++  VF+ + +R+V SW  +I+ F Q G+ EK L L   M   G +P
Sbjct: 147 SLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP 206

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           N  + TVA+++C+ L     G   H + +K+G  L ++V +A+VDMY G  +  E  +++
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY-GKCDCLEVAREV 265

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +     S V+WN+ I G+     ++  +E  ++M+       + T +SIL ACS   +L
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV-SWNSMIKA 496
              + IH  +++S   ++++V  SLI+ Y KCG    AE VFS+ T  DV  SWN MI +
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISS 384

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y   G   KA+ ++++MV  G++P   TF +VL ACS    ++ G+++  S + E  +  
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLET 443

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISK 614
           +E   S ++D+  + G  + A    +++P K     W  + +A   H   + A  +F   
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQPREALYQFDEM 502

Query: 615 QILELDPDDAAVYVTLS 631
           Q   L PD   +   LS
Sbjct: 503 QKFGLKPDGVTLLAVLS 519



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 149/304 (49%), Gaps = 35/304 (11%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F K P+++ ++ + +I  GY+    KG S++     N    +G        T P  
Sbjct: 262 AREVFQKMPRKSLVAWNSMI-KGYV---AKGDSKSCVEILNRMIIEG--------TRP-- 307

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                    +  +  +L  CSR   L  G+  H  + ++ V  D +V  SL+++Y KCG+
Sbjct: 308 --------SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359

Query: 168 IKSMVAVVKQMPYLDIA-SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
             ++   V      D+A S N +++ Y     + +A   + ++  + V+P+  T++++L 
Sbjct: 360 -ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C  L+A+++GKQ+H    + +  +   + +ALL MY KCG  ++A  +F  + +++V+S
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WT +I+ +  HG   + L     M++ G+ P+  T    L++C            HA +I
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG-----------HAGLI 527

Query: 347 KRGM 350
             G+
Sbjct: 528 DEGL 531


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 210/628 (33%), Positives = 324/628 (51%), Gaps = 23/628 (3%)

Query: 131 ECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
            C  LGR  HA I +T V     F++  LVNMY+K   + S   V+       + +   L
Sbjct: 20  HCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSL 79

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           ++G   N  F  A   F  +   +VQPN +T+  +      +     GKQ+H   +K   
Sbjct: 80  ISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGM 139

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           +    V  +   MY K G   DA ++F+ + QRN+ +W A I+   Q     + L  +  
Sbjct: 140 IYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQD---RRSLDAIVA 196

Query: 310 MRE----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
            +E     G +PN  TF   L +C  +   ++G   HA +++ G      V   ++D Y 
Sbjct: 197 FKEFLCVHG-EPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYG 255

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G+I  A+     +G   + VSW + +A   +N + E A   F Q  R +    +F  S
Sbjct: 256 KCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ-ARKEVEPTDFMIS 314

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S+L AC+ L  L     +H+  VK+  E N+ VGS+L++ Y KCGS E+AE+VFS+L   
Sbjct: 315 SVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPER 374

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVV--EGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           ++V+WN+MI  Y+  G    A+ LFE+M +   GIRP+  T +++LS CS  G V+ G +
Sbjct: 375 NLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQ 434

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +FESM   YGI P   H++C+VDLLGR+G ++ A  FI N+ I+PT  +W  L  ACR H
Sbjct: 435 IFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMH 494

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
              ++ +  ++++ ELD  D+  +V LSNM A AG   +A   RK MK   I K  G SW
Sbjct: 495 GKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSW 554

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVL 712
           I V N+I+ F +++ SH    ++   L +L   +++ G+            D EK   V 
Sbjct: 555 IAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVW 614

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
           YHSE++A+ FGLI+LP       ++ L 
Sbjct: 615 YHSEKIALAFGLIALPQGVPIRITKNLR 642



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 136/284 (47%), Gaps = 5/284 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-D 182
           L+ C     L LGR+ HA I +     D  V   L++ Y KCGDI S   V  ++    +
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +LA   +N   ++A   FL+    +V+P  +  S++L+ C  L  ++ G+ +HA
Sbjct: 276 VVSWCSMLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRSVHA 334

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K        V +AL+ MY KCG +E+AE VF  L +RN+++W A+I G+   GD + 
Sbjct: 335 LAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDM 394

Query: 303 PLRLV--CLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTA 359
            LRL     +   GI P+  T    L+ C+ +     G  +F +  +  G+  G      
Sbjct: 395 ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFAC 454

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           +VD+    G +  A + ++ M    +   W A +     + KTE
Sbjct: 455 VVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTE 498



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 98/184 (53%), Gaps = 6/184 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LELGR  HAL  K  V  + FV ++LV+MY KCG I++   V  ++P  +
Sbjct: 316 VLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERN 375

Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + + N ++ GYA     D A   F  + L    ++P++ T  ++L++C  + A++ G Q+
Sbjct: 376 LVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQI 435

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             ++M+L Y  +    +   ++ +  + G+++ A    + + +Q  +  W A++   + H
Sbjct: 436 F-ESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMH 494

Query: 298 GDYE 301
           G  E
Sbjct: 495 GKTE 498


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 201/628 (32%), Positives = 343/628 (54%), Gaps = 29/628 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPY 180
           V+  CS  + + +GR     + KT     D  V  SL++M+ K     ++   V  +M  
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           L++ +   ++    +     +A  FFL +     + + +T S++ + C  L  +  G+QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           H+  ++        V  +L+ MY KC   G ++D   VF+ +   +V+SWTA+I G+ Q+
Sbjct: 292 HSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN 349

Query: 298 GDY-EKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +   + + L   M   G ++PN +TF+ A  +C ++ +  +G        KRG+A    
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSS 409

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  +++ M+     + +A+   + + +  + VS+N  + G  RN   E A E  S++   
Sbjct: 410 VSNSVISMFVKCDRMEDARTAFESLSEK-NLVSYNTFLDGTCRNLDFEHAFELLSEIAER 468

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +     FT++S+L   + + SL   EQIHS+++K     N  V ++LI  Y+KCGS + A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTA 528

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVFS +   +V+SW SMI  ++++G A + +  F +M  EG++P   T++A+LSACSH 
Sbjct: 529 SRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHV 588

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G + F SM +++ I P+  HY+CMVDLL RAG L  A  FI+ +P +    +WR 
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
              ACR HS+ ++ +  +++ILE DP++ A Y+ LSN+YA AG   ++ E R+ MK + +
Sbjct: 649 FLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNL 708

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY-- 713
            KE GCSWIEV +K+++F+  + SH    ++Y++L  L+ +I+  G+  +   D VL+  
Sbjct: 709 VKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVPD--TDLVLHKL 766

Query: 714 ---------------HSERLAVGFGLIS 726
                          HSE++AV FGLIS
Sbjct: 767 EEEDDEAKKEMLLYQHSEKIAVAFGLIS 794



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 223/465 (47%), Gaps = 14/465 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           +L  C R     LG+  HA + +  +  D  +  SL+++Y+K GD+     V + M    
Sbjct: 68  LLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFG 127

Query: 182 --DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S + ++A +  N     A   F++   + + PN Y Y+ ++  C +   +  G+ 
Sbjct: 128 KRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRV 187

Query: 240 LHAQTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +    MK  +  S   V  +L+ M++K     E+A  VF+ + + NV++WT +I    Q 
Sbjct: 188 ILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + +R    M   G + +++T +   ++CA L N  +G   H+  I+ G+A  D V 
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLA--DDVE 305

Query: 358 TAIVDMY---SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-QKTEEAIEAFSQMV 413
            ++VDMY   S  G + + +K    M +  S +SW A I G+ +N     EAI  FS+M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRM-QDHSVMSWTALITGYMQNCNLATEAINLFSEMI 364

Query: 414 -RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            +     + FT+SS  KAC  +      +Q+     K    SN  V +S+I  + KC   
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRM 424

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA   F  L+  ++VS+N+ +    +N     A  L  ++    +  +  TF ++LS  
Sbjct: 425 EDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGV 484

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++ G ++ G+++  S V + G+   +   + ++ +  + G ++ A
Sbjct: 485 ANVGSLRKGEQI-HSQVLKLGLSCNQPVCNALISMYSKCGSIDTA 528



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 180/347 (51%), Gaps = 16/347 (4%)

Query: 210 DGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           DGI  +P +  T+S++L  C        GK +HA+ ++ +    + + N+L+++Y K G 
Sbjct: 55  DGI--RPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGD 112

Query: 269 MEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           +  A+ VFE + +   R+V+SW+A++  F  +G     ++L     E G+ PN+Y +T  
Sbjct: 113 LTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAV 172

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKS 383
           + +C++     +G +    ++K G    D  VG +++DM+  G      A K   +M + 
Sbjct: 173 IRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE- 231

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            + V+W   I    +     EAI  F  MV +    D+FT SS+  AC+ L +L+   Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           HS  ++S    +V    SL++ Y KC   GS +D  +VF ++    V+SW ++I  Y QN
Sbjct: 292 HSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN 349

Query: 501 -GRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVF 545
              A +AI LF +M+ +G + P + TF +   AC +    + G++V 
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVL 396



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 4/150 (2%)

Query: 405 AIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           A+ A   M R+     D  T+SS+LK+C         + +H+R+++ + E +  + +SLI
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLI 104

Query: 464 EAYNKCGSWEDAERVF---SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             Y+K G    A+ VF    +    DVVSW++M+  +  NGR   AI LF + +  G+ P
Sbjct: 105 SLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVP 164

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +  + AV+ ACS+S  V  G+ +   ++K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVILGFLMK 194


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 297/532 (55%), Gaps = 13/532 (2%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L   ++ P    Y +++A C     +   + +HA   +        + N+L+ MY KCG 
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + DA  VF+ +  R+V+SWT +I G+ Q+    + + L+  M      PN +TFT  L +
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
             +     +G   HA  +K       +VG+A++DMY+   ++  A      +  S + VS
Sbjct: 171 TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL-VSKNEVS 229

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAGF R    E  +  F++M RN      FTYSS+  A + + +L     +H+ ++
Sbjct: 230 WNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLI 289

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS  +    VG++++  Y K GS  DA +VF ++   D+V+WN+M+ A +Q G  ++A+ 
Sbjct: 290 KSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVA 349

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            FE++   GI+    TFL+VL+ACSH GLV++G+  F+ M+K+Y + PE  HY   VDLL
Sbjct: 350 HFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLL 408

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG L+ ALIF+  +P++PTA +W  L  ACR H + KM ++ +  + ELDPDD    V
Sbjct: 409 GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPV 468

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L N+YA  G   DA   RK+MK   + KEP CSW+++ N ++ F + + +H +   +Y 
Sbjct: 469 LLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYR 528

Query: 689 KLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPA 729
             +++  +I+  G+  N           E+E ++ YHSE++A+ F LI++PA
Sbjct: 529 MWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPA 580



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 203/428 (47%), Gaps = 39/428 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C++ + L   R  HA ++++ + GD F+  SL++MY KCG +     V  +MP  D
Sbjct: 66  IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+AGYA+N +  +A      +     +PN +T++++L   G+      G+Q+HA
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHA 185

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +     V +ALL MY +C  M+ A  VF+ LV +N +SW A+I GF +  D E 
Sbjct: 186 LAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGET 245

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M+ +G     +T++   ++ A +     G   HA +IK G  L  FVG  ++ 
Sbjct: 246 TLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLG 305

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A+K    M K    V+WN  +    +    +EA+  F ++ +     ++ 
Sbjct: 306 MYAKSGSMVDARKVFDRMDKR-DLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQI 364

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S+L ACS           H  +VK   E   +    +++ YN               
Sbjct: 365 TFLSVLTACS-----------HGGLVK---EGKHYF--DMMKDYN--------------- 393

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              ++  + S +    + G  ++A+I   KM +E   PT + + A+L AC      + GQ
Sbjct: 394 VQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME---PTAAVWGALLGACRMHKNAKMGQ 450

Query: 543 ----KVFE 546
                VFE
Sbjct: 451 YAADHVFE 458



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 1/247 (0%)

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LR + L+    + P    +   +A+CA  +N       HA + +  +A   F+  +++ M
Sbjct: 45  LRELDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHM 104

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G + +A+    +M  S   VSW   IAG+ +N    EAI     M+R     + FT
Sbjct: 105 YCKCGAVSDARHVFDKM-PSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 163

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++S+LKA       +  EQ+H+  VK  ++ +V+VGS+L++ Y +C   + A  VF +L 
Sbjct: 164 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 223

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           + + VSWN++I  +++       ++ F +M   G   T+ T+ ++ SA +  G ++ G+ 
Sbjct: 224 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 283

Query: 544 VFESMVK 550
           V   ++K
Sbjct: 284 VHAHLIK 290


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 211/662 (31%), Positives = 340/662 (51%), Gaps = 93/662 (14%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGID- 213
           SLV+ YA  G ++   A    +P    D    N +++ +A+ +L   A S F  L   D 
Sbjct: 94  SLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDD 153

Query: 214 -VQPNHYTYSTMLAICGSLS--AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC---G 267
            ++P+ Y+++++L+  G +   A+    QLH    KL   +  +VSNAL+ +Y+KC   G
Sbjct: 154 SLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPG 213

Query: 268 MMEDAESVFEGLVQRNVISWT-------------------------------AIINGFKQ 296
           +  DA  V + + +++ ++WT                               A+I+G+ Q
Sbjct: 214 VTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQ 273

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G   +   L   M    I P+E+TFT  L++CA+      G   H Q I+      DFV
Sbjct: 274 SGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQ---PDFV 330

Query: 357 -------GTAIVDMYSGLGEI-----------------WE--------------AKKQLK 378
                    A+V +YS  G+I                 W               A +  K
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFK 390

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           EM    S +SW   ++G+      E+A++ F+QM   D    ++TY+  + AC  L +L 
Sbjct: 391 EM-PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALK 449

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             +Q+H+ +V+  FE++   G++L+  Y +CG+ +DA  VF  +   D VSWN+MI A  
Sbjct: 450 HGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALG 509

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+G  R+A+ LF++MV +GI P   +FL +L+AC+H+GLV DG + FESM +++GI P E
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+ ++DLLGRAG++  A   I  +P +PT  IW  + + CR + D+++  + + Q+ +
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFK 629

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           + P+    Y+ LSN Y+ AG   DA   RKLM+ + + KEPGCSWIEV NK++ F   + 
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDT 689

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISL 727
            H +  +VY  L+ +  ++  +G+  +           EKE  +  HSERLAV FGL+ L
Sbjct: 690 KHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKL 749

Query: 728 PA 729
           PA
Sbjct: 750 PA 751



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 200/443 (45%), Gaps = 72/443 (16%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+    ++V  + + GD+ +  +  +++        N +++GY ++ +  +AF  F ++ 
Sbjct: 229 DELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMV 288

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ--YLSKTA--VSNALLTMYIKC 266
              + P+ +T++++L+ C +      GK +H Q ++LQ  ++ + A  V+NAL+T+Y K 
Sbjct: 289 SKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKS 348

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQ------------------------------ 296
           G +  A  +F+ +  ++V+SW  I++G+ +                              
Sbjct: 349 GKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYV 408

Query: 297 HGDY-EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           HG   E  L+L   MR + + P +YT+  A+A+C  L     G   HA +++ G    + 
Sbjct: 409 HGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNS 468

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A++ MY+  G + +A+     M  +  SVSWNA I+   ++    EA+E F QMV  
Sbjct: 469 AGNALLTMYARCGAVKDARLVFLVM-PNVDSVSWNAMISALGQHGHGREALELFDQMVAQ 527

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  ++ +IL AC+           H+ +V   F+                  +E  
Sbjct: 528 GIYPDRISFLTILTACN-----------HAGLVDDGFQ-----------------YFESM 559

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           ER F      D   +  +I    + GR  +A  L + M  E   PT + + A+LS C  +
Sbjct: 560 ERDFGISPGED--HYARLIDLLGRAGRIGEARDLIKTMPFE---PTPAIWEAILSGCRIN 614

Query: 536 GLVQDGQKVFESMVKEYGILPEE 558
           G ++ G    + + K   ++PE 
Sbjct: 615 GDMELGAYAADQLFK---MVPEH 634



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 148/345 (42%), Gaps = 46/345 (13%)

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA-SSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           G    T++V  Y+  G + ++      +  +   +V  NA I+ F R      A+  F  
Sbjct: 88  GPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRS 147

Query: 412 MVRNDAAC--DEFTYSSILKACSLLPSLAT--CEQIHSRIVKSKFESNVHVGSSLIEAYN 467
           ++ +D +   D+++++S+L A   +  LA   C Q+H  + K    + + V ++LI  Y 
Sbjct: 148 LLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYM 207

Query: 468 KC---GSWEDAERVFSQLTAADVVS-------------------------------WNSM 493
           KC   G   DA +V  ++   D ++                               WN+M
Sbjct: 208 KCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAM 267

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EY 552
           I  Y Q+G   +A  LF +MV + I P   TF ++LSAC+++G    G+ V    ++ + 
Sbjct: 268 ISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQP 327

Query: 553 GILPEEAH--YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
             +PE A    + +V L  ++GK+ +A     ++ +K     W  + +       L  A 
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVS-WNTILSGYIESGCLDNAA 386

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            I K   E+       ++ + + Y   GL  DA +    M+ +++
Sbjct: 387 RIFK---EMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDV 428



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C     L+ G++ HA + +           +L+ MYA+CG +K    V   MP +D 
Sbjct: 439 VAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDS 498

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N +++   ++    +A   F ++    + P+  ++ T+L  C     +D+G Q + +
Sbjct: 499 VSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQ-YFE 557

Query: 244 TMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
           +M+  +       +   L+ +  + G + +A  + + +  +     W AI++G + +GD 
Sbjct: 558 SMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDM 617

Query: 301 E 301
           E
Sbjct: 618 E 618


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 184/528 (34%), Positives = 309/528 (58%), Gaps = 13/528 (2%)

Query: 213 DVQPNHYTY-STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           D    H ++   +L +C     + +GK  HAQ + +   +    SN L+ MY KCG ++ 
Sbjct: 58  DFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDF 117

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ +  R+++SW  +I    Q+G+  + L L+  M+ +G   +E+T +  L +CA+
Sbjct: 118 ARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAA 177

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
                   + HA  IK  M L  FV TA++D+Y+  G + +A    + M    S V+W++
Sbjct: 178 KCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESM-PDRSVVTWSS 236

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
             AG+ +N+  E+A+  F +        D+F  SS++ AC+ L ++   +Q+++ + KS 
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 296

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F SN+ V SSLI+ Y KCG  E++ +VF  +   +VV WN+MI   S++ R+ + +ILFE
Sbjct: 297 FCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFE 356

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           KM   G+ P + TF++VLSAC H GLV+ GQK F+ M KE+ + P   HYSCMVD L RA
Sbjct: 357 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRA 416

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G++  A   IS LP   +A +W  L A+CR H +L++AE  +K++ +++P ++  Y+ LS
Sbjct: 417 GQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLS 476

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           NMYA  G   +  + RKL+K  ++ KE G SWIE+ +K++ F    ++H ++ ++Y KL 
Sbjct: 477 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 536

Query: 692 QLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           ++M +++ +G+            ++ K++ + +HSE+LA   GL+ LP
Sbjct: 537 EVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLP 584



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 5/414 (1%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           FV E+L  C++ + L  G+  HA I    +  D   +  L+NMY+KCG +     V  +M
Sbjct: 66  FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P   + S N ++    +N   ++A    L++       + +T S++L  C +  A+ E +
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ 185

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            LHA  +K        V+ ALL +Y KCG+M+DA  VFE +  R+V++W+++  G+ Q+ 
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            YE+ L L     E G+  +++  +  + +CA L     G   +A + K G     FV +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVAS 305

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G I E+ K  +++ K  + V WNA I+G  R+ ++ E +  F +M +   +
Sbjct: 306 SLIDMYAKCGGIEESYKVFRDVEKR-NVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAER 477
            ++ T+ S+L AC  +  +   ++    + K      NV   S +++  ++ G   +A  
Sbjct: 365 PNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424

Query: 478 VFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + S+L   A    W S++ +   +G    A +  +K+    I P NS    +LS
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLS 476



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  V+  C+    +  G++ +AL++K+  C + FV +SL++MYAKCG I+    V 
Sbjct: 265 DQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVF 324

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   ++   N +++G +++A   +    F K+  + + PN  T+ ++L+ CG +  + 
Sbjct: 325 RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVK 384

Query: 236 EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           +G++      K  +L+      + ++    + G + +A  +   L    +   W +++  
Sbjct: 385 KGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLAS 444

Query: 294 FKQHGDYE 301
            + HG+ E
Sbjct: 445 CRTHGNLE 452


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 210/657 (31%), Positives = 345/657 (52%), Gaps = 48/657 (7%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSM 171
           +L +   +++LS C   + +   ++ HA I KT +    F  + L+   A  + GDI   
Sbjct: 26  VLQEHPSLKLLSKC---QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           +++   +   ++   N ++ G + +     A  FF+++    V+PN YT+  +L  C  L
Sbjct: 83  ISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKL 142

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE-------------- 277
           ++  EGKQ+HA  +KL ++S   +  +L+ MY + G M +A+ VF+              
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202

Query: 278 ------GLVQR-----------NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
                 G + R           +V+SW A+I G+ Q G  ++ L L   MR+  + PNE 
Sbjct: 203 AGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNES 262

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L++CA      +G    + +  RG+     +  A++DMYS  G++  A++   +M
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +    +SWN  I G+      +EA+  F +M+ +     E T+ SIL +C+ L ++   
Sbjct: 323 LER-DVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + IH+ I K+    +  + +SLI+ Y KCG+   A +VF  +    + SWN+MI   + +
Sbjct: 382 KWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMH 441

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G+A KA  LF KM  +GI P   TF+ +LSAC H+GLV  GQ+ F SMV++Y I P+  H
Sbjct: 442 GQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQH 501

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y CM+DLLGRAG  E A   + N+ +KP   IW  L  ACR H  +++ E +++++ EL+
Sbjct: 502 YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE 561

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           PD+   YV LSN+YA AG   D    R  +  + + K PGC+ IEV N ++ F   +K H
Sbjct: 562 PDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVH 621

Query: 681 SEMPKVYEKLKQLMQQIEDIGHT----------DNE-KEDRVLYHSERLAVGFGLIS 726
            +   +Y  L+++ +Q++  G            D E KE  + +HSE+LA+ FGLIS
Sbjct: 622 PQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLIS 678


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 201/593 (33%), Positives = 320/593 (53%), Gaps = 8/593 (1%)

Query: 123 VLSYCSREECLELGRRYHALI---TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VL  CS    L+LGR  H  +   TK  V    +V  ++++M+AKCG ++    + ++MP
Sbjct: 139 VLKACSSLHALQLGRWVHETMHGKTKANV----YVQCAVIDMFAKCGSVEDARRMFEEMP 194

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+AS   L+ G   N    +A   F K+    + P+    +++L  CG L A+  G  
Sbjct: 195 DRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMA 254

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           L    ++  + S   VSNA++ MY KCG   +A  VF  +V  +V+SW+ +I G+ Q+  
Sbjct: 255 LQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCL 314

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           Y++  +L   M   G+  N    T  L +   L     G   H  V+K G+     VG+A
Sbjct: 315 YQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSA 374

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ MY+  G I EA+  + E       + WN+ I G+      E A   F ++   +   
Sbjct: 375 LIVMYANCGSIKEAE-SIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRP 433

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T  SIL  C+ + +L   ++IH  + KS    NV VG+SLI+ Y+KCG  E  E+VF
Sbjct: 434 NFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVF 493

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            Q+   +V ++N+MI A   +G+  K +  +E+M  EG RP   TF+++LSACSH+GL+ 
Sbjct: 494 KQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLD 553

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G  ++ SM+ +YGI P   HYSCMVDL+GRAG L+ A  FI+ +P+ P A ++  L  A
Sbjct: 554 RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGA 613

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H+ +++ E ++++IL+L  DD+  YV LSN+YA      D  + R ++K K + K+P
Sbjct: 614 CRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKP 673

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL 712
           G SWI+V + IY F + +  H    K+ E L  L+  ++   +      D++L
Sbjct: 674 GSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLVMKSEDYMLTNVNDKLL 726



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 236/485 (48%), Gaps = 5/485 (1%)

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
           + LVN+Y   G ++      + +P+  I + N +L G      F +A  F+  +    V 
Sbjct: 71  SQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVT 130

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P++YTY  +L  C SL A+  G+ +H +TM  +  +   V  A++ M+ KCG +EDA  +
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           FE +  R++ SWTA+I G   +G+  + L L   MR +G+ P+       L +C  L   
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAV 249

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G       ++ G     +V  A++DMY   G+  EA +    M  S   VSW+  IAG
Sbjct: 250 KLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYS-DVVSWSTLIAG 308

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + +N   +E+ + +  M+    A +    +S+L A   L  L   +++H+ ++K    S+
Sbjct: 309 YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSD 368

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGS+LI  Y  CGS ++AE +F   +  D++ WNSMI  Y+  G    A   F ++  
Sbjct: 369 VVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWG 428

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
              RP   T +++L  C+  G ++ G+++    V + G+    +  + ++D+  + G LE
Sbjct: 429 AEHRPNFITVVSILPICTQMGALRQGKEI-HGYVTKSGLGLNVSVGNSLIDMYSKCGFLE 487

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSD-LKMAEFISKQILELDPDDAAVYVTLSNMY 634
           +       + ++     +  + +AC  H    K   F  +   E +  +   +++L +  
Sbjct: 488 LGEKVFKQMMVR-NVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSAC 546

Query: 635 AEAGL 639
           + AGL
Sbjct: 547 SHAGL 551



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 208/441 (47%), Gaps = 5/441 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V  +L  C R E ++LG        ++    D +V+ ++++MY KCGD      V 
Sbjct: 232 DSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVF 291

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M Y D+ S + L+AGY++N L+ +++  ++ +  + +  N    +++L   G L  + 
Sbjct: 292 SHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLK 351

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK++H   +K   +S   V +AL+ MY  CG +++AES+FE    ++++ W ++I G+ 
Sbjct: 352 QGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYN 411

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
             GD+E        +      PN  T    L  C  +     G   H  V K G+ L   
Sbjct: 412 LVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVS 471

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG +++DMYS  G +   +K  K+M    +  ++N  I+    + + E+ +  + QM   
Sbjct: 472 VGNSLIDMYSKCGFLELGEKVFKQM-MVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEE 530

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWED 474
               ++ T+ S+L ACS    L     +++ ++     E N+   S +++   + G  + 
Sbjct: 531 GNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDG 590

Query: 475 AERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           A +  +++    D   + S++ A   + +     +L E+++   ++  +S    +LS   
Sbjct: 591 AYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERIL--QLKADDSGHYVLLSNLY 648

Query: 534 HSGLVQDGQKVFESMVKEYGI 554
            SG   +      SM+K+ G+
Sbjct: 649 ASGKRWEDMSKVRSMIKDKGL 669



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 185/367 (50%), Gaps = 9/367 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT-----AVSNALLTMYIKCGMME 270
           P H+T ++   +  S   + E + LHA  + L +   T     + ++ L+ +Y+  G ++
Sbjct: 26  PIHFTVTSFHRL-KSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQ 84

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A   F  L  + +I+W AI+ G    G + K +     M + G+ P+ YT+ + L +C+
Sbjct: 85  HAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACS 144

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           SL    +G   H  +  +  A   +V  A++DM++  G + +A++  +EM       SW 
Sbjct: 145 SLHALQLGRWVHETMHGKTKA-NVYVQCAVIDMFAKCGSVEDARRMFEEM-PDRDLASWT 202

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I G   N +  EA+  F +M       D    +SIL AC  L ++     +    V+S
Sbjct: 203 ALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRS 262

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            FES+++V +++I+ Y KCG   +A RVFS +  +DVVSW+++I  YSQN   +++  L+
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLY 322

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M+  G+        +VL A     L++ G+++   ++KE G++ +    S ++ +   
Sbjct: 323 IGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKE-GLMSDVVVGSALIVMYAN 381

Query: 571 AGKLEIA 577
            G ++ A
Sbjct: 382 CGSIKEA 388


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 185/563 (32%), Positives = 320/563 (56%), Gaps = 16/563 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           L AG+ ++AL      F   LD   V P+ +T +  L  C  +  +D G+ + A  +K  
Sbjct: 94  LHAGHPEDALH----LFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRG 149

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            ++   V ++L+ MY  C  +  A+ +F+ + +  V+ W AII  + ++G++ + + +  
Sbjct: 150 LMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFK 209

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M E G+  +E T    + +C  + ++ +G      V ++G+     + TA++DMY+  G
Sbjct: 210 GMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCG 269

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           E+ +A++    M +S   V+W+A I+G+ +  +  EA+  FS+M   +   ++ T  S+L
Sbjct: 270 ELGKARRLFDGM-QSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVL 328

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC++L +L T + +HS I + +    + +G++L++ Y KCG  +DA   F  +   +  
Sbjct: 329 SACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSW 388

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +W ++IK  + NGR R+A+ LF  M    I PT+ TF+ VL ACSHS LV++G++ F+SM
Sbjct: 389 TWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSM 448

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            ++YGI P   HY C+VDLLGRAG ++ A  FI  +PI+P A IWR L ++C  H ++++
Sbjct: 449 TQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEI 508

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
            E   KQI+ L+P  +  Y+ LSN+YA  G   +A   RK MK + I K PGCS IE+  
Sbjct: 509 GEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDG 568

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSER 717
            +  FF+++  H ++ ++Y+K+++++ +I+  G+  N           EKE  V +HSE+
Sbjct: 569 VVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHEKEVSVSHHSEK 628

Query: 718 LAVGFGLISLPAKNKFECSRTLE 740
           LA+ FGL+ L        S+ L 
Sbjct: 629 LAIAFGLMKLDPGATIRLSKNLR 651



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 1/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V   L  CSR   L++GR   A   K  +  D+FV +SL++MYA C D+ +   + 
Sbjct: 118 DQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLF 177

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +    +   N ++  Y KN  + +    F  +  + V  +  T  +++  CG +    
Sbjct: 178 DAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAK 237

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +     +   +    +  AL+ MY KCG +  A  +F+G+  R+V++W+A+I+G+ 
Sbjct: 238 LGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYT 297

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q     + L L   M+   ++PN+ T    L++CA L     G   H+ + ++ ++L   
Sbjct: 298 QADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTII 357

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +GTA+VD Y+  G I +A +  + M    +S +W A I G   N +  EA+E FS M + 
Sbjct: 358 LGTALVDFYAKCGCIDDAVEAFESM-PVKNSWTWTALIKGMATNGRGREALELFSSMRKA 416

Query: 416 DAACDEFTYSSILKACS 432
                + T+  +L ACS
Sbjct: 417 SIEPTDVTFIGVLMACS 433



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 4/185 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VLS C+    LE G+  H+ I +  +     +  +LV+ YAKCG I   V   + MP
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMP 383

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  +   L+ G A N    +A   F  +    ++P   T+  +L  C     ++EG++
Sbjct: 384 VKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR 443

Query: 240 LHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            H  +M   Y  K    +   ++ +  + G++++A      + ++ N + W A+++    
Sbjct: 444 -HFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAV 502

Query: 297 HGDYE 301
           H + E
Sbjct: 503 HKNVE 507


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 193/635 (30%), Positives = 342/635 (53%), Gaps = 19/635 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS  +    GR  H  I +  +  + +V+ +LV+ YAKCG +     V  +M   D
Sbjct: 125 VLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRD 184

Query: 183 IASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + + N +++G++     +D+     +++   DV PN  T   +L     ++++  GK++H
Sbjct: 185 VVAWNSMISGFSLHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIH 243

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
              ++  ++    V   +L +Y KC  ++ A  +F+ + + +N ++W+A++  +      
Sbjct: 244 GFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFM 303

Query: 301 EKPLRLVC---LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            + L L C   ++++D I  +  T    +  CA+L +   G   H   IK G  L   VG
Sbjct: 304 REALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVG 363

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             ++ MY+  G I  A +   EM     +VS+ A I+G+ +N  +EE +  F +M  +  
Sbjct: 364 NTLLSMYAKCGIINGAMRFFNEM-DLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T +S+L AC+ L  L      H   +   F ++  + ++LI+ Y KCG  + A +
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++    +VSWN+MI AY  +G   +A++LF+ M  EG++P + TF+ ++SACSHSGL
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G+  F +M +++GI+P   HY+CMVDLL RAG  +    FI  +P++P   +W  L 
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +ACR + ++++ E +SK+I +L P+    +V LSNMY+  G   DA + R   K +   K
Sbjct: 603 SACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEK 662

Query: 658 EPGCSWIEVYNKIYRFFSQN-KSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
            PGCSWIE+   ++ F     +SH ++ ++  KL +L+ +++ +G+            + 
Sbjct: 663 SPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEE 722

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           EKE  +LYHSE+LA+ FG++SL        ++ L 
Sbjct: 723 EKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLR 757



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 268/549 (48%), Gaps = 19/549 (3%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITK-------TAVCGDQFVTASLVNMYA 163
           L + L  ++   +L  C + + L  G+  H  + K       T +         LV++Y 
Sbjct: 3   LRTRLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYI 62

Query: 164 KCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
            C ++K    V  +MP+   ++   N L+  YA N  +++A   + K+ G  + PN +T+
Sbjct: 63  ACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTF 122

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
             +L  C +L    EG+++H    +L+  S   VS AL+  Y KCG ++DA+ VF+ + +
Sbjct: 123 PFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK 182

Query: 282 RNVISWTAIINGFKQH-GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           R+V++W ++I+GF  H G Y++  RL+  M+ D + PN  T    L + A + +   G  
Sbjct: 183 RDVVAWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKE 241

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   ++RG      VGT I+D+Y     I  A++    MG   + V+W+A +  +    
Sbjct: 242 IHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCD 301

Query: 401 KTEEAIEAFSQ--MVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
              EA+E F Q  M+++D       T +++++ C+ L  L+T   +H   +KS F  ++ 
Sbjct: 302 FMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLM 361

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG++L+  Y KCG    A R F+++   D VS+ ++I  Y QNG + + + +F +M + G
Sbjct: 362 VGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSG 421

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           I P  +T  +VL AC+H   +  G           G   +    + ++D+  + GK++ A
Sbjct: 422 INPEKATLASVLPACAHLAGLHYGS-CSHCYAIICGFTADTMICNALIDMYAKCGKIDTA 480

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHS-DLK-MAEFISKQILELDPDDAAVYVTLSNMYA 635
                 +  +     W  +  A   H   L+ +  F + Q   L PDD   ++ L +  +
Sbjct: 481 RKVFDRMHKRGIVS-WNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVT-FICLISACS 538

Query: 636 EAGLQADAE 644
            +GL A+ +
Sbjct: 539 HSGLVAEGK 547


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 329/593 (55%), Gaps = 10/593 (1%)

Query: 121  IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
            + VL  C   + L++GR+ H +  K ++  D FV  ++++MY+K G I    A+   +P 
Sbjct: 432  VSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPG 491

Query: 181  LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             D  S N L+ G A N   ++A     ++    + P+  +++T +  C ++ A + GKQ+
Sbjct: 492  KDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551

Query: 241  HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
            H  ++K    S  AV ++L+ +Y K G +E +  V   +   +++   A+I G  Q+   
Sbjct: 552  HCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNRE 611

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTA 359
            ++ + L   + +DG  P+ +TF   L+ C    +S +G   H+  +K  +   D  +G +
Sbjct: 612  DEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGIS 671

Query: 360  IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
            +V +Y     + +A K L E+    + V W A I+G+ +N  +++++  F +M  +D   
Sbjct: 672  LVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRS 731

Query: 420  DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            DE T++S+LKACS + +L   ++IH  I+KS F S     S+L++ Y+KCG    +  +F
Sbjct: 732  DEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIF 791

Query: 480  SQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
             +L    +++ WNSMI  +++NG A +A++LF+KM    ++P   T L VL ACSH+GL+
Sbjct: 792  KELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLI 851

Query: 539  QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             +G+ +F+SM + YGI+P   HY+C++DLLGR G L+ A   I  LP +    IW    A
Sbjct: 852  SEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLA 911

Query: 599  ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
            AC+ H D +  +  +K+++E++P  ++ YV LS+++A AG   +A+  R+ M+ K + K 
Sbjct: 912  ACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKF 971

Query: 659  PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRV 711
            PGCSWI V NK   F  Q+  H +   +Y+ L  L   +         K+DR+
Sbjct: 972  PGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMM--------NKDDRI 1016



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 266/512 (51%), Gaps = 6/512 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS  +     + G++ HA   K  +  + FV +SL+N+Y K G I     V       +
Sbjct: 333 MLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 392

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I   N +L G+ +N L ++    F  +   D++ + +T+ ++L  C +L ++D G+Q+H 
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+K    +   V+NA+L MY K G ++ A+++F  +  ++ +SW A+I G   + + E+
Sbjct: 453 ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + ++  M+  GI P+E +F  A+ +C+++R +  G   H   IK  +     VG++++D
Sbjct: 513 AVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLID 572

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +YS  G++  ++K L  +  S S V  NA I G  +N + +EAIE F Q++++      F
Sbjct: 573 LYSKFGDVESSRKVLAHVDAS-SMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNF 631

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T++SIL  C+   S    +Q+HS  +KS     +  +G SL+  Y KC   EDA ++ ++
Sbjct: 632 TFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAE 691

Query: 482 L-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +    ++V W + I  Y+QNG + +++++F +M    +R   +TF +VL ACS    + D
Sbjct: 692 VPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTD 751

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA-- 598
           G+++   ++K  G +  E   S ++D+  + G +  +      L  K     W  +    
Sbjct: 752 GKEIHGLIIKS-GFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGF 810

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           A   +++  +  F   Q  +L PD+  +   L
Sbjct: 811 AKNGYANEALLLFQKMQESQLKPDEVTLLGVL 842



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 272/544 (50%), Gaps = 9/544 (1%)

Query: 134 ELGRRYHAL-----ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
            +GR   AL     + K     DQ    ++++  A  G +     ++K++      + N 
Sbjct: 238 RVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNA 297

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +++ Y+++ L  + F  +  +    + P   T+++ML+   S++A DEG+Q+HA  +K  
Sbjct: 298 VISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHG 357

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
             +   V ++L+ +Y+K G + DA+ VF+   ++N++ W A++ GF Q+   E+ +++  
Sbjct: 358 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQ 417

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MR   ++ +++TF   L +C +L +  +G   H   IK  M    FV  A++DMYS LG
Sbjct: 418 YMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLG 477

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            I +  K L  +     SVSWNA I G   N++ EEA+    +M     A DE ++++ +
Sbjct: 478 AI-DVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAI 536

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS + +  T +QIH   +K    SN  VGSSLI+ Y+K G  E + +V + + A+ +V
Sbjct: 537 NACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMV 596

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
             N++I    QN R  +AI LF++++ +G +P+N TF ++LS C+       G++V    
Sbjct: 597 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYT 656

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDL 606
           +K   +  + +    +V +  +   LE A   ++ +P       W    +  A   +SD 
Sbjct: 657 LKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQ 716

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS-WIE 665
            +  F   +  ++  D+A     L      A L    E    ++K   +S E   S  ++
Sbjct: 717 SLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMD 776

Query: 666 VYNK 669
           +Y+K
Sbjct: 777 MYSK 780



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 37/470 (7%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS CSR   LE GR+ H  + K+  C   F  A LV+MYAKC ++K    V   +   D
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
                 ++AGY +   + QA + F +++ +   P+  TY T+++   S+           
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM----------- 274

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                                   G + DA ++ + +   + ++W A+I+ + Q G   +
Sbjct: 275 ------------------------GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L   M+  G+ P   TF   L++ AS+     G   HA  +K G+    FVG+++++
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G I +AKK   +     + V WNA + GF +N   EE I+ F  M R D   D+F
Sbjct: 371 LYVKHGCISDAKKVF-DFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDF 429

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S+L AC  L SL    Q+H   +K+  ++++ V +++++ Y+K G+ + A+ +FS +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN++I   + N    +A+ + ++M   GI P   +F   ++ACS+    + G+
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           ++  + +K Y +    A  S ++DL  + G +E +   ++++      PI
Sbjct: 550 QIHCASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPI 598



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/491 (23%), Positives = 223/491 (45%), Gaps = 59/491 (12%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ +  + +L+ C  L A+++G+Q+H   +K  + S       L+ MY KC  ++DA  V
Sbjct: 158 PDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRV 217

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+   + I W ++I G+ + G Y++ L L   M + G  P++ T+   +++ AS    
Sbjct: 218 FDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLAS---- 273

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                                          +G + +A+  LK + +  S+V+WNA I+ 
Sbjct: 274 -------------------------------MGRLSDARTLLKRI-QMPSTVAWNAVISS 301

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + ++    E    +  M R        T++S+L A + + +    +QIH+  VK   ++N
Sbjct: 302 YSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDAN 361

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGSSLI  Y K G   DA++VF   T  ++V WN+M+  + QN    + I +F+ M  
Sbjct: 362 VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRR 421

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             +   + TF++VL AC +   +  G++V    +K   +  +    + M+D+  + G ++
Sbjct: 422 ADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKN-SMDADLFVANAMLDMYSKLGAID 480

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI--LELDPDDAAVYVTLSNM 633
           +A    S +P K +   W  L      + + + A ++ K++    + PD+ + + T  N 
Sbjct: 481 VAKALFSLIPGKDSVS-WNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVS-FATAINA 538

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            +              ++  E  K+  C+ I+     Y   S +   S +  +Y K   +
Sbjct: 539 CSN-------------IRATETGKQIHCASIK-----YNVCSNHAVGSSLIDLYSKFGDV 580

Query: 694 MQQIEDIGHTD 704
               + + H D
Sbjct: 581 ESSRKVLAHVD 591



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/367 (23%), Positives = 175/367 (47%), Gaps = 22/367 (5%)

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG-FFR 398
           + HA+V++ G+ L   +G A+VD+Y   G +  A + L     + +S +  + +     R
Sbjct: 77  VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136

Query: 399 NQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +    + ++AF ++        D+F  + +L ACS L +L    Q+H  ++KS F S+  
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
             + L++ Y KC   +DA RVF  +   D + W SMI  Y + GR ++A+ LF +M   G
Sbjct: 197 CQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMG 256

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG-KLEI 576
             P   T++ ++S  +  G + D + + + +      +P    ++ ++    ++G + E+
Sbjct: 257 SAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYSQSGLESEV 311

Query: 577 ALIF--ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV--TLSN 632
             ++  +    + PT   +  + +A    +     + I    ++    DA V+V  +L N
Sbjct: 312 FGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVK-HGLDANVFVGSSLIN 370

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           +Y + G  +DA+      K+ + S E     I ++N +   F QN    E  ++++ +++
Sbjct: 371 LYVKHGCISDAK------KVFDFSTEKN---IVMWNAMLYGFVQNDLQEETIQMFQYMRR 421

Query: 693 LMQQIED 699
              + +D
Sbjct: 422 ADLEADD 428



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 8/216 (3%)

Query: 94  GFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           G+  +G S+   V  + + S     D+     VL  CS    L  G+  H LI K+    
Sbjct: 707 GYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVS 766

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
            +   ++L++MY+KCGD+ S   + K++    +I   N ++ G+AKN   ++A   F K+
Sbjct: 767 YETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKM 826

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCG 267
               ++P+  T   +L  C     I EG+ L   +M   Y     V +   L+ +  + G
Sbjct: 827 QESQLKPDEVTLLGVLIACSHAGLISEGRNLF-DSMSQVYGIVPRVDHYACLIDLLGRGG 885

Query: 268 MMEDAESVFEGLVQR-NVISWTAIINGFKQHGDYEK 302
            +++A+ V + L  R + + W   +   + H D E+
Sbjct: 886 HLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEER 921


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 203/610 (33%), Positives = 337/610 (55%), Gaps = 39/610 (6%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--V 214
           SLV  Y KCG+++    + +++   D+ S N ++A   +    + A   F ++  ++  V
Sbjct: 264 SLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPV 323

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           QPN  T+ ++L+    LSA+  G+++HA   +L     T+++N+L+T Y KC  +  A  
Sbjct: 324 QPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKARE 383

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +FE L+ R++ISW +++ G++Q+    +   +   M   GI+P+ ++ T+ + + AS  +
Sbjct: 384 IFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI-IFNAASRDS 442

Query: 335 SHMGYM-----FHAQVIKR----GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           S + Y       H  +++R    G++L   V  AI+ MY+    I +A+K  K M K+  
Sbjct: 443 SGLIYFRRGKEIHGYILRRITPGGVSLS--VSNAILKMYAKFNRIADAEKIFKGM-KNRD 499

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           S SWNA + G+ RN K E+ +  F  +++     D  + S +L +C  L SL   +Q H+
Sbjct: 500 SYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHA 559

Query: 446 RIVK-------SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
            + K          +S + + ++LI  Y+KCGS +DA +VF ++   DV SW +MI   +
Sbjct: 560 VVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCA 619

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G A +A+ LFE+M  +GI+P   TFLA+L AC+H GLVQ+G   F+SM  +YG+ P  
Sbjct: 620 HHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSI 679

Query: 559 AHYSCMVDLLGRAGKLEIA--LIFISNLPIKP----TAPIWRPLFAACRCHSDLKMAEFI 612
            HY+CM+DL GR+G+ + A  L+       KP       +W+ L  AC     L +    
Sbjct: 680 EHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEA 739

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           + +ILEL+P+D A Y+ L+N+YA +GL  DA + RK M+ K + KE GCSWI+  N+ + 
Sbjct: 740 ATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHV 799

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F + +  H +  ++YEKL QL      +G+            + EKE  +  HSE+LAV 
Sbjct: 800 FVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVS 859

Query: 722 FGLISLPAKN 731
           FGL++    N
Sbjct: 860 FGLLNCGVGN 869



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 197/378 (52%), Gaps = 9/378 (2%)

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           +K    +    P  D+ S + L+A Y++   F QAF  F K+ G  +QPN ++ +++L +
Sbjct: 71  LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE--GLVQRNVI 285
             S   I   +QLH  +++  +   + +  A +TMY +CG++EDA+ VF+   L+  +++
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
            W +II  +  HG + + LRL C M   G + P E T+   + +C S      G M H +
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGR 250

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +IK G+   + +  ++V  Y   G +  A  QL E       VSWNA IA   +  + E 
Sbjct: 251 IIKAGLEATN-LWNSLVTFYGKCGNLQHA-SQLFERISRKDVVSWNAMIAANEQRGEGEN 308

Query: 405 AIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           A+  F +M++ +     +  T+ S+L A S L +L    +IH+ I +   E +  + +SL
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           I  Y+KC     A  +F +L   D++SWNSM+  Y QN +  +   +F++M++ GI P +
Sbjct: 369 ITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDS 428

Query: 523 STFLAVLSACSH--SGLV 538
            +   + +A S   SGL+
Sbjct: 429 HSLTIIFNAASRDSSGLI 446



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 236/516 (45%), Gaps = 35/516 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A QLF+  P R  +S S LI            SR G    N +   G         +   
Sbjct: 74  AQQLFDNFPNRDVISWSALI---------AAYSRCG----NFAQAFGLFQKMMGEGLQPN 120

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            +SL SLL           CS  E + L R+ H    +T    D  + A+ + MY++CG 
Sbjct: 121 GFSLASLLKVS--------CSTGE-IGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGV 171

Query: 168 IKSMVAVVKQ--MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTM 224
           ++    V  +  +  LDI   N ++A Y  +  + +    F K+  +  V P   TY+++
Sbjct: 172 LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASV 231

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           +  CGS      G  +H + +K   L  T + N+L+T Y KCG ++ A  +FE + +++V
Sbjct: 232 VNACGSSGEEKYGAMVHGRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDV 290

Query: 285 ISWTAIINGFKQHGDYEKPLRLV--CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           +SW A+I   +Q G+ E  L L    L  E  + PN  TF   L++ + L     G   H
Sbjct: 291 VSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIH 350

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           A + +  + +   +  +++  YS   E+ +A++  + +      +SWN+ +AG+ +N++ 
Sbjct: 351 AHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL-LLRDIISWNSMLAGYEQNEQQ 409

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSL----LPSLATCEQIHSRIVKSKFESNV-- 456
               + F +M+ +    D  + + I  A S     L      ++IH  I++      V  
Sbjct: 410 GRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSL 469

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +++++ Y K     DAE++F  +   D  SWN+M+  YS+N +    +++F  ++ +
Sbjct: 470 SVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ 529

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           G    + +   +L++C     +Q G++    + K +
Sbjct: 530 GFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLF 565



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 155/313 (49%), Gaps = 7/313 (2%)

Query: 238 KQLHAQTMKL--QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           KQL  Q      Q++ + +  +  L    +   ++ A+ +F+    R+VISW+A+I  + 
Sbjct: 38  KQLEFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYS 97

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G++ +   L   M  +G+ PN ++    L    S     +    H   I+ G  L   
Sbjct: 98  RCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSG 157

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +  A + MYS  G + +A++   E    A  +  WN+ IA +  +    E +  F +MV 
Sbjct: 158 IRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVS 217

Query: 415 -NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
               A  E TY+S++ AC           +H RI+K+  E+  ++ +SL+  Y KCG+ +
Sbjct: 218 VGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQ 276

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM--VVEGIRPTNSTFLAVLSA 531
            A ++F +++  DVVSWN+MI A  Q G    A+ LF +M  V   ++P   TFL++LSA
Sbjct: 277 HASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSA 336

Query: 532 CSHSGLVQDGQKV 544
            S    ++ G+++
Sbjct: 337 VSGLSALRCGREI 349



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 158/327 (48%), Gaps = 18/327 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +LS  S    L  GR  HA I + ++  D  +T SL+  Y+KC ++     + +++  
Sbjct: 331 LSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLL 390

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA----IDE 236
            DI S N +LAGY +N    + F  F ++    ++P+ ++ + +       S+       
Sbjct: 391 RDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRR 450

Query: 237 GKQLHAQTMKLQYLSKT--AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           GK++H   ++         +VSNA+L MY K   + DAE +F+G+  R+  SW A+++G+
Sbjct: 451 GKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGY 510

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK------- 347
            ++  +E  L +   + + G   +  + ++ L SC  L +  +G  FHA V K       
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDC 570

Query: 348 --RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
             +   L   +  A++ MYS  G I +A +   +M +     SW A I G   +    EA
Sbjct: 571 PHQDSLLS--INNALISMYSKCGSIKDAAQVFLKMERK-DVFSWTAMITGCAHHGLAVEA 627

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACS 432
           ++ F +M  +    ++ T+ ++L AC+
Sbjct: 628 LQLFERMKTDGIKPNQVTFLALLMACA 654



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 162/333 (48%), Gaps = 17/333 (5%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           +SW+A IA + R     +A   F +M+      + F+ +S+LK       +  C Q+H  
Sbjct: 87  ISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGW 146

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRAR 504
            +++ F  +  + ++ I  Y++CG  EDA+RVF +  L A D++ WNS+I AY  +G   
Sbjct: 147 SIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWV 206

Query: 505 KAIILFEKMVVEGI-RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           + + LF KMV  G+  PT  T+ +V++AC  SG  + G  V   ++K    L     ++ 
Sbjct: 207 EVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK--AGLEATNLWNS 264

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
           +V   G+ G L+ A      +  K     W  + AA     + + A  + +++L+++P  
Sbjct: 265 LVTFYGKCGNLQHASQLFERISRKDVVS-WNAMIAANEQRGEGENALGLFRRMLKVEPPV 323

Query: 624 AAVYVT-LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
               VT LS + A +GL A    +     +  +S E   S   + N +  F+S+ +   +
Sbjct: 324 QPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTS---ITNSLITFYSKCREVGK 380

Query: 683 MPKVYEKLKQLMQQIED-----IGHTDNEKEDR 710
             +++E+L  L++ I        G+  NE++ R
Sbjct: 381 AREIFERL--LLRDIISWNSMLAGYEQNEQQGR 411



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 61  LSTSDLIFNGYMNIEEKGIS--RNGYSTRNDSFPDGFID--DGCSNTVPVTCYSLESLLD 116
           ++ ++ IF G  N +    +   +GYS RN  F D  +   D      P+   SL  LL 
Sbjct: 485 IADAEKIFKGMKNRDSYSWNAMMDGYS-RNAKFEDVLMIFLDILKQGFPLDHVSLSILL- 542

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKT---AVCGDQ----FVTASLVNMYAKCGDIK 169
                   + C R   L+LG+++HA++ K      C  Q     +  +L++MY+KCG IK
Sbjct: 543 --------TSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIK 594

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               V  +M   D+ S   ++ G A + L  +A   F ++    ++PN  T+  +L  C 
Sbjct: 595 DAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACA 654

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFE 277
               + EG   +  +M   Y    ++ +   ++ ++ + G  + A+S+ E
Sbjct: 655 HGGLVQEG-SYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVE 703


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 204/644 (31%), Positives = 345/644 (53%), Gaps = 59/644 (9%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA + K    G +     L+N+YAK  +++    + +++P  D+ S   L++G+A+  L 
Sbjct: 311 HAKLIKNGCVGIR--GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLS 368

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGS-LSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
                 F K+    V PN +T S +L  C S ++    GK +H   ++        ++N+
Sbjct: 369 ADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNS 428

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV----------- 307
           +L  Y+KC     AE +F  + +++ +SW  +++ + Q GD +K + L            
Sbjct: 429 ILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASW 488

Query: 308 -----CLMRED---------------GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
                 LMR                 G   N+ TF++AL   +SL    +G   H QV+K
Sbjct: 489 NTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLK 548

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS--------------SVSWNAQI 393
            G+    FV  +++DMY   GE+ +A    K + + +S              SVSW++ +
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+ +N + E+A++ FS M+ +    D+FT +S++ AC+    L    Q+H  I K    
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            +V +GSS+I+ Y KCGS  DA  +F+Q    +VV W SMI   + +G+ R+A+ LFE M
Sbjct: 669 LDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELM 728

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           + EGI P   +F+ VL+ACSH+GL+++G K F  M + YGI P   H++CMVDL GRAG+
Sbjct: 729 INEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGR 788

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L     FI N  I   + +WR   ++CR H +++M  ++ K++LEL+P DA  Y+  S++
Sbjct: 789 LNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSI 848

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            A      +A + R LM+ + + K P  SWI++ N+++ F   ++SH +  K+Y  L +L
Sbjct: 849 CATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDEL 908

Query: 694 MQQIEDIGHT--------DNEKEDRVL---YHSERLAVGFGLIS 726
           + ++++IG++        D E+E R +   YHSE+LA+ +G+IS
Sbjct: 909 IGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIIS 952



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 181/396 (45%), Gaps = 32/396 (8%)

Query: 58  RAGLSTSDLIFNGYMNIEEKGISRNGYSTR------NDSFPDGFIDDGCSNTVPVTCYSL 111
           R GLS    +   +  ++++G+  N ++        + +  D  I  G    +      L
Sbjct: 364 RIGLSAD--VLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDL 421

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           +++L+      +L Y  +  C     +   L+ +     D      +++ Y + GD++  
Sbjct: 422 DAVLNN----SILDYYVKCRCFGYAEKLFGLMAEK----DTVSWNIMMSSYLQIGDMQKS 473

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           V + +Q+P  D AS N ++ G  +N     A     K+       N  T+S  L +  SL
Sbjct: 474 VDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSL 533

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN-------- 283
           S +  GKQ+H Q +K+  L    V N+L+ MY KCG ME A  +F+ L Q +        
Sbjct: 534 SVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEES 593

Query: 284 -------VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
                   +SW+++++G+ Q+G +E  L+    M    ++ +++T T  +++CAS     
Sbjct: 594 CDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLE 653

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H  + K G  L  F+G++I+DMY   G + +A     +  K  + V W + I+G 
Sbjct: 654 LGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQ-AKDRNVVLWTSMISGC 712

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             + +  EA+  F  M+      +E ++  +L ACS
Sbjct: 713 ALHGQGREAVRLFELMINEGITPNEVSFVGVLTACS 748



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 89  DSFPDGFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITK 145
           ++  DG + +GC        Y + +     +K      L   S    L LG++ H  + K
Sbjct: 489 NTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLK 548

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP---------------YLDIASCNCLL 190
             V  D FV  SL++MY KCG+++    + K +P                ++  S + ++
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           +GY +N  F+ A   F  +    V+ + +T +++++ C S   ++ G+Q+H    K+ + 
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
               + ++++ MY+KCG + DA  +F     RNV+ WT++I+G   HG   + +RL  LM
Sbjct: 669 LDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELM 728

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMY 364
             +GI PNE +F   L +C     SH G +      F       G+  G    T +VD+Y
Sbjct: 729 INEGITPNEVSFVGVLTAC-----SHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLY 783

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNA 391
              G + E K+ +     S  S  W +
Sbjct: 784 GRAGRLNEIKEFIHNNAISKLSSVWRS 810



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 441 EQIHSRIVKSKFESNVHV-GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
           E +H++++K+     V + G+ L+  Y K  + E A ++F ++   DV SW  +I  +++
Sbjct: 308 EVLHAKLIKN---GCVGIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFAR 364

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            G +   + LF KM  +G+ P   T   VL +CS
Sbjct: 365 IGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 197/624 (31%), Positives = 350/624 (56%), Gaps = 9/624 (1%)

Query: 94   GFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
            G++ +G +N V    ++++S     D      +LS C+  + L+LG + H++I K     
Sbjct: 402  GYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFAS 461

Query: 151  DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
            + FV  +LV+MYAK G ++      + +   D  S N ++ GY +     +AF  F +++
Sbjct: 462  NLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMN 521

Query: 211  GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             + + P+  + +++L+ C S+  +++GKQ+H  ++K    +K    ++L+ MY KCG ++
Sbjct: 522  LLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAID 581

Query: 271  DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
             A  +   + +R+V+S  A+I G+ Q  + E+ + L   M  +GI+  E TF   L +C 
Sbjct: 582  SAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACH 640

Query: 331  SLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
              +  ++G   H+ ++K G+ L D F+G +++ MY       +A     E     S+V W
Sbjct: 641  EQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVW 700

Query: 390  NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
             A I+G  +N  +  A++ + +M   +   D+ T+ S L+AC+++ S+    + HS I  
Sbjct: 701  TAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFH 760

Query: 450  SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAII 508
            + F+S+    S+L++ Y KCG  + + +VF +++   DV+SWNSMI  +++NG A  A+ 
Sbjct: 761  TGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALR 820

Query: 509  LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            +F++M    + P + TFL VL+ACSHSG V +G+ +F+ MV  YG+ P   H +CMVDLL
Sbjct: 821  VFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLL 880

Query: 569  GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
            GR G L+ A  FI+ L  +P A +W  +  ACR H D    +  +++++EL+P +++ YV
Sbjct: 881  GRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYV 940

Query: 629  TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH---SEMPK 685
             LSN+YA +G   +    R+ M+ K + K PGCSWI V  +   F + +KSH   SE+  
Sbjct: 941  LLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDA 1000

Query: 686  VYEKLKQLMQQIEDIGHTDNEKED 709
            + + L  LM++ + +   D   +D
Sbjct: 1001 ILKDLTPLMRENDYVVQLDFFGDD 1024



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 243/449 (54%), Gaps = 2/449 (0%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           DQ    +++N Y   G + +   +  +MP  ++ + N +++G+AK     +A  FF  + 
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMR 319

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              ++    T  ++L+   SL+A+D G  +HA+ +K    S   V ++L++MY KCG ME
Sbjct: 320 KAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKME 379

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A+ VF+ L ++NV+ W A++ G+ Q+G   + + L   M+  G  P+++T++  L++CA
Sbjct: 380 AAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACA 439

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L+   +G+  H+ +IK   A   FVG A+VDMY+  G + +A++Q  E+ ++  +VSWN
Sbjct: 440 CLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQF-ELIRNRDNVSWN 498

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I G+ + +   EA   F +M       DE + +SIL AC+ +  L   +Q+H   VK+
Sbjct: 499 VIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKT 558

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             E+ ++ GSSLI+ Y KCG+ + A ++ + +    VVS N++I  Y+Q     +A+ LF
Sbjct: 559 GQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLF 617

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M+VEGI  T  TF ++L AC     +  G+++   ++K    L +E     ++ +   
Sbjct: 618 RDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMN 677

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           + +   A +  S      +A +W  + + 
Sbjct: 678 SLRTTDASVLFSEFSNPKSAVVWTAMISG 706



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 163/589 (27%), Positives = 272/589 (46%), Gaps = 29/589 (4%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A  LF++ P R  ++ + +I          G ++ GY      F       G  +T   
Sbjct: 279 NASDLFSRMPNRNVVAWNLMI---------SGHAKGGYGVEAIEFFQNMRKAGIKST--- 326

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                     +  +  VLS  +    L+ G   HA   K  +  + +V +SLV+MYAKCG
Sbjct: 327 ----------RSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCG 376

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +++   V   +   ++   N +L GY +N   ++    F  +      P+ +TYS++L+
Sbjct: 377 KMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILS 436

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C  L  +D G QLH+  +K ++ S   V NAL+ MY K G +EDA   FE +  R+ +S
Sbjct: 437 ACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVS 496

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  II G+ Q  D  +   L   M   GI P+E +    L++CAS+R    G   H   +
Sbjct: 497 WNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSV 556

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G     + G++++DMY+  G I  A K L  M +  S VS NA IAG+ +    E+A+
Sbjct: 557 KTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPER-SVVSMNALIAGYAQ-INLEQAV 614

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEA 465
             F  M+       E T++S+L AC     L    QIHS I+K   +  +  +G SL+  
Sbjct: 615 NLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGM 674

Query: 466 YNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y       DA  +FS+ +     V W +MI   SQN  +  A+ L+++M    + P  +T
Sbjct: 675 YMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQAT 734

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F++ L AC+    ++DG +   S++   G   +E   S +VD+  + G ++ ++     +
Sbjct: 735 FVSALRACAVVSSIKDGTET-HSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEM 793

Query: 585 PIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
             K     W  +    A   +++  +  F   +   + PDD      L+
Sbjct: 794 SRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLT 842



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 251/556 (45%), Gaps = 72/556 (12%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+R E ++ GR+ H  + K       +   +L+ MYAKC  +    ++      LD
Sbjct: 166 VLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELD 225

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S   ++ GY K  L ++A   F +++ +  +P+   + T++                 
Sbjct: 226 KVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVI----------------- 268

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                         NA    Y+  G +++A  +F  +  RNV++W  +I+G  + G   +
Sbjct: 269 --------------NA----YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVE 310

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +     MR+ GI     T    L++ ASL     G + HA+ +K+G+    +VG+++V 
Sbjct: 311 AIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVS 370

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G++  AKK    + +  + V WNA + G+ +N    E +E F  M       D+F
Sbjct: 371 MYAKCGKMEAAKKVFDTLNEQ-NVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDF 429

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           TYSSIL AC+ L  L    Q+HS I+K+KF SN+ VG++L++ Y K G+ EDA + F  +
Sbjct: 430 TYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELI 489

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D VSWN +I  Y Q     +A  LF +M + GI P   +  ++LSAC+    ++ G+
Sbjct: 490 RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP----------------- 585
           +V    VK  G   +    S ++D+  + G ++ A   ++ +P                 
Sbjct: 550 QVHCLSVKT-GQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI 608

Query: 586 ----------------IKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVY 627
                           I  T   +  L  AC     L +   I   IL+  L  DD  + 
Sbjct: 609 NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLG 668

Query: 628 VTLSNMYAEAGLQADA 643
           V+L  MY  +    DA
Sbjct: 669 VSLLGMYMNSLRTTDA 684



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 201/420 (47%), Gaps = 37/420 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V++YAKC D+       KQ+   DI + N +L+ ++K         +F  L    V PN
Sbjct: 100 IVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPN 159

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +T++ +L+ C  L  +  G+Q+H   +K+ + S +    AL+ MY KC  + DA S+F+
Sbjct: 160 EFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFD 219

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G V+ + +SWT++I G+ + G  E+ +++   M + G +P++  F               
Sbjct: 220 GAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAF--------------- 264

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
                                 +++ Y  LG +  A      M  + + V+WN  I+G  
Sbjct: 265 --------------------VTVINAYVDLGRLDNASDLFSRM-PNRNVVAWNLMISGHA 303

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +     EAIE F  M +        T  S+L A + L +L     +H+  +K    SNV+
Sbjct: 304 KGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVY 363

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VGSSL+  Y KCG  E A++VF  L   +VV WN+M+  Y QNG A + + LF  M   G
Sbjct: 364 VGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCG 423

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             P + T+ ++LSAC+    +  G ++   ++K           + +VD+  ++G LE A
Sbjct: 424 FYPDDFTYSSILSACACLKYLDLGHQLHSVIIKN-KFASNLFVGNALVDMYAKSGALEDA 482



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/491 (23%), Positives = 209/491 (42%), Gaps = 81/491 (16%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K +HAQ++KL + SK  + N ++ +Y KC  ++ AE  F+ L  +++++W +I++   + 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G     ++   L+   G+ PNE+TF + L+SCA L     G   H  V+K G     +  
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A++ MY+    + +A+  + +       VSW + I G+ +    EEA++ F +M +   
Sbjct: 199 GALIGMYAKCNFLTDARS-IFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQ 257

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+  + ++                                   I AY   G  ++A  
Sbjct: 258 EPDQVAFVTV-----------------------------------INAYVDLGRLDNASD 282

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +FS++   +VV+WN MI  +++ G   +AI  F+ M   GI+ T ST  +VLSA +    
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-------------------- 577
           +  G  V    +K+ G+       S +V +  + GK+E A                    
Sbjct: 343 LDFGLLVHAEALKQ-GLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLG 401

Query: 578 -------------LIF-ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PD 622
                        L F + +    P    +  + +AC C   L +   +   I++     
Sbjct: 402 GYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFAS 461

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
           +  V   L +MYA++G   DA +Q +L++ ++       SW    N I   + Q +   E
Sbjct: 462 NLFVGNALVDMYAKSGALEDARQQFELIRNRD-----NVSW----NVIIVGYVQEEDEVE 512

Query: 683 MPKVYEKLKQL 693
              ++ ++  L
Sbjct: 513 AFHLFRRMNLL 523


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 186/581 (32%), Positives = 320/581 (55%), Gaps = 1/581 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS  + E  L  G + H L  K  +  +  V  +LV+MYAKC  +     +   MP  D+
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++G  +N   DQA   F  +    ++P+  T  ++L     L+  ++GK+LH  
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++        + +AL+ +Y KC  +  A+SV++     +V+  + +I+G+  +G  ++ 
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           +++   + E GI PN       L +CAS+    +G   H+  +K       +V +A++DM
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +    +     +   V+WN+ I+ F +N + EEA+  F +M          T
Sbjct: 494 YAKCGRL-DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVT 552

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SS+L AC+ LP++   ++IH  ++K    +++   S+LI+ Y KCG+ E A RVF  + 
Sbjct: 553 ISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + VSWNS+I +Y   G  ++++ L   M  EG +  + TFLA++SAC+H+G VQ+G +
Sbjct: 613 EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLR 672

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F  M +EY I P   H++CMVDL  RAGKL+ A+  I ++P KP A IW  L  ACR H
Sbjct: 673 LFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVH 732

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++AE  S+++ +LDP ++  YV +SN+ A AG      + R+LMK  ++ K PG SW
Sbjct: 733 RNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSW 792

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTD 704
           ++V N  + F + +KSH +   +Y  LK ++ ++ + GH D
Sbjct: 793 VDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGHGD 833



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 244/474 (51%), Gaps = 2/474 (0%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D      V+  C+    + LGR  H       + GD FV ++L+ MYA  G +     
Sbjct: 143 LPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQ 202

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   M   D    N ++ GY K      A   F  +     +PN  T +  L++  + S 
Sbjct: 203 VFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESD 262

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G QLH   +K    S+ AV+N L++MY KC  ++D   +F  + + ++++W  +I+G
Sbjct: 263 LFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G  ++ L L C M++ GI P+  T    L +   L   + G   H  +++  + + 
Sbjct: 323 CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD 382

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            F+ +A+VD+Y     +  A + + +  K+   V  +  I+G+  N  ++EA++ F  ++
Sbjct: 383 VFLVSALVDIYFKCRAVRMA-QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLL 441

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 +    +S+L AC+ + ++   +++HS  +K+ +E   +V S+L++ Y KCG  +
Sbjct: 442 EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLD 501

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            +  +FS+++A D V+WNSMI +++QNG   +A+ LF +M +EG++ +N T  +VLSAC+
Sbjct: 502 LSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACA 561

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
               +  G+++   ++K   I  +    S ++D+ G+ G LE A     ++P K
Sbjct: 562 SLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK 614



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 220/477 (46%), Gaps = 14/477 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++ VL  C     L LG + H   +T      D  +   LV MY      +  VAV   +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 179 PYLDIASC----NCLLAGYAKNALFDQAFSFFLKLDGIDVQP--NHYTYSTMLAICGSLS 232
           P    A+C    N L+ G      +  A  F+LK+      P  + +T+  ++  C +L 
Sbjct: 102 PR-GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           AI  G+ +H     L       V +AL+ MY   G++ DA  VF+G+ +R+ + W  +++
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ + G     + L   MR  G +PN  T    L+  A+  +   G   H   +K G+  
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V   +V MY+    + +  K    M +    V+WN  I+G  +N   ++A+  F  M
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            ++    D  T  S+L A + L      +++H  IV++    +V + S+L++ Y KC + 
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A+ V+    A DVV  ++MI  Y  NG +++A+ +F  ++ +GIRP      +VL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIALIFISNLPIK 587
           +    ++ GQ++    +K      E   Y  S ++D+  + G+L+++    S +  K
Sbjct: 460 ASMAAMKLGQELHSYALKN---AYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 152/298 (51%), Gaps = 1/298 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL  C+    ++LG+  H+   K A  G  +V ++L++MYAKCG +     +  ++ 
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N +++ +A+N   ++A + F ++    V+ ++ T S++L+ C SL AI  GK+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K    +     +AL+ MY KCG +E A  VFE + ++N +SW +II  +  +G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGT 358
            ++ + L+  M+E+G   +  TF   +++CA       G  +F     +  +A       
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA 691

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            +VD+YS  G++ +A + + +M     +  W A +     ++  E A  A  ++ + D
Sbjct: 692 CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLD 749


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 310/584 (53%), Gaps = 12/584 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS  + L  GR  H ++ K+ +  ++++ +SL+ MY KCG IK+   +   +  LD  S 
Sbjct: 221 CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSI--LDKDSV 278

Query: 187 -------NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                  N +++GY  N  F QA   F+K+    ++P++ T  ++ ++C     I  GKQ
Sbjct: 279 RRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQ 338

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H    K    +   V  ALL MY+KCG M     +F      N+I W+A+I+   Q G 
Sbjct: 339 IHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGC 398

Query: 300 YEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             K L L    + EDG+  +       L +C+SL     G   H    K G     FVG+
Sbjct: 399 PTKALELFYEFKMEDGL-ADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGS 457

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VD+Y+   ++  +KK    + +    VSWNA I+G+ +++  +EA++AF  M   +  
Sbjct: 458 ALVDLYAKCRDMGYSKKVFLRLSQK-DLVSWNALISGYAQDECADEALKAFRDMQLEEIR 516

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +  T + IL  C+ L  +  C+++H  +++    S V V +SLI  Y KCG    +   
Sbjct: 517 PNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYT 576

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   + VSWNS+I     + R  + I+LF+KMV  GI+P + TF A+LSACSH+G V
Sbjct: 577 FEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRV 636

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G K F+SMV+++ + P+   Y+CMVDLLGRAG L  A   I  +P  P   IW  L  
Sbjct: 637 DEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLG 696

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +C+ H D  +AE ++  I +L P      V L+N+Y   G   +  + R  +K   + K+
Sbjct: 697 SCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKK 756

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           PGCSWIEV N  + F + ++SHS+  ++Y  ++ L  +I+  G+
Sbjct: 757 PGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGY 800



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 220/422 (52%), Gaps = 7/422 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ H  + K  V  D  V  SL+ MY KCG ++  V + ++MP +D+ S N +++G+ K
Sbjct: 128 GRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187

Query: 196 NALFDQAFSFFLKLDG-IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +  + ++  FF  +     + PN     + +  C SL ++  G+++H   +K     +  
Sbjct: 188 SMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEY 247

Query: 255 VSNALLTMYIKCGMMEDAESVFEGL-----VQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           + ++L+ MY+KCG +++AE++F  +     V+RN + W  +I+G+  +G + + L L   
Sbjct: 248 LVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIK 307

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   GI P+  T     + C+   +   G   H  + K G+     V TA++DMY   G+
Sbjct: 308 MMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGD 367

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +    K  +   ++ + + W+A I+   ++    +A+E F +    D   D     ++L+
Sbjct: 368 MGTGLKIFRR-SQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLR 426

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS L       QIH    K  F S+V VGS+L++ Y KC     +++VF +L+  D+VS
Sbjct: 427 ACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVS 486

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I  Y+Q+  A +A+  F  M +E IRP   T   +LS C+H  ++   ++V   ++
Sbjct: 487 WNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLI 546

Query: 550 KE 551
           ++
Sbjct: 547 RQ 548



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 232/466 (49%), Gaps = 14/466 (3%)

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSA 233
           K   ++ ++  N ++  Y ++  FD A   +LK+  DG+ V+   Y +  ++   G L  
Sbjct: 66  KIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRY-FPCLIKAFGGLCD 124

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           + +G+Q+H   +KL  L   +V N+LLTMY KCG++EDA  +FE + + +++SW  +I+G
Sbjct: 125 VYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISG 184

Query: 294 FKQHGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           F++  DY + L     ++ E GI PN      ++ SC+SL++   G   H  V+K G+ +
Sbjct: 185 FQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDV 244

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS----SVSWNAQIAGFFRNQKTEEAIEA 408
            +++ +++++MY   G I  A+     +    S    +V WN  I+G+  N    +A+  
Sbjct: 245 EEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLL 304

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +M+      D  T  S+   CS    +A  +QIH  I K   ++N+ V ++L++ Y K
Sbjct: 305 FIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLK 364

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG      ++F +    +++ W+++I   +Q+G   KA+ LF +  +E     +   +AV
Sbjct: 365 CGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAV 424

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L ACS   L  +G ++   +  + G + +    S +VDL  +   +  +      L  K 
Sbjct: 425 LRACSSLTLKPEGMQI-HGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKD 483

Query: 589 TAPIWRPL---FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
               W  L   +A   C +D  +  F   Q+ E+ P+   +   LS
Sbjct: 484 LVS-WNALISGYAQDEC-ADEALKAFRDMQLEEIRPNTVTIACILS 527



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/392 (24%), Positives = 190/392 (48%), Gaps = 12/392 (3%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNT-- 103
           Y    L     K   +  ++ IFN  +  ++  + RN  +   +    G++ +GC +   
Sbjct: 247 YLVSSLIEMYMKCGSIKNAENIFNSIL--DKDSVRRN--AVIWNVMISGYVSNGCFSQAL 302

Query: 104 ---VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
              + +  + ++   D   ++ + S CS    +  G++ H LI K  +  +  V  +L++
Sbjct: 303 LLFIKMMVWGIKP--DYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLD 360

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCGD+ + + + ++    ++   + +++  A++    +A   F +    D   +   
Sbjct: 361 MYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGI 420

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
              +L  C SL+   EG Q+H    K+ ++S   V +AL+ +Y KC  M  ++ VF  L 
Sbjct: 421 LVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLS 480

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           Q++++SW A+I+G+ Q    ++ L+    M+ + I PN  T    L+ CA L    +   
Sbjct: 481 QKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKE 540

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  +I++G+     V  +++  Y+  G+I  +    ++M +  + VSWN+ I G   + 
Sbjct: 541 VHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPER-NDVSWNSIILGMGMHS 599

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +T+E I  F +MV +    D  T+++IL ACS
Sbjct: 600 RTDEMIVLFDKMVASGIKPDHVTFTAILSACS 631


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 187/566 (33%), Positives = 316/566 (55%), Gaps = 4/566 (0%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ELG +  +   K+ +  + F  ++L+++YAKCG +     V   MP  +  S N L+AGY
Sbjct: 112 ELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGY 171

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A++    QA   FL++  +++ P+  T++ +LA     S     +QLH +  K       
Sbjct: 172 AESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGL 231

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMRE 312
            V NA +T Y +CG   D+  +F+G+  R++ISW +++  +  HG  ++ +R  V +MRE
Sbjct: 232 VVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRE 291

Query: 313 DGIDPNEYTFTVALASCASLR-NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-- 369
            G+ P+ Y+FT  ++ C+    +   G   H+ V+K G+     V  A++ MY+   E  
Sbjct: 292 SGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENC 351

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + E   +  +      +VSWN+ + G+  +  + +A+  F  M   + + DEF  S+ L+
Sbjct: 352 MMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALR 411

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +CS L  L    Q+HS +++S F SN  V SSLI  Y+KCG   DA + F +      V 
Sbjct: 412 SCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVP 471

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNSM+  Y+Q+G+A+    LF +M+   +   + TF+A+L+A SH GLV +G ++  SM 
Sbjct: 472 WNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSME 531

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             Y I     HY+C VDL GRAG+L+ A   I ++P +P A +W  L  ACR H ++++A
Sbjct: 532 TRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELA 591

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             ++  +   +P   + YV LS+MY+  G+ +D    +K+MK + +SK PG SWIEV N+
Sbjct: 592 SDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWIEVKNE 651

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQ 695
           ++ F + ++SH  M ++++ L+ L+Q
Sbjct: 652 VHSFNADDRSHPRMDEIFDMLRMLLQ 677



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 216/500 (43%), Gaps = 18/500 (3%)

Query: 158 LVNMYAKCGDIKSMVA---VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           L+  Y+  G    + A   V  ++P  D  S N LLA +        A+     +    +
Sbjct: 32  LLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGL 91

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
             + +   + L    +    + G QL +  +K   +     ++ALL +Y KCG + DA  
Sbjct: 92  TASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARR 151

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+G+  RN +SW A+I G+ +     + + L   M+   + P++ TF   LA+      
Sbjct: 152 VFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSW 211

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +    H ++ K G ALG  V  A +  YS  G   ++++    + +S   +SWN+ + 
Sbjct: 212 YSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGI-QSRDLISWNSMLG 270

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQ-----IHSRIV 448
            +  +   +EA+  F +M+R      D ++++S++  C    S   C+      IHS +V
Sbjct: 271 AYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVC----SEHGCDDRQGRSIHSLVV 326

Query: 449 KSKFESNVHVGSSLIEAYNKCGS---WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           K   E   HV +++I  Y +       EDA + F  L   D VSWNSM+  YS +G +  
Sbjct: 327 KIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSD 386

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+  F  M  E +        A L +CS   +++ G++V  S+V + G    +   S ++
Sbjct: 387 ALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQV-HSLVIQSGFSSNDFVSSSLI 445

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
            +  + G +  A           + P    +F   +      + +  S+ +    P D  
Sbjct: 446 FMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHV 505

Query: 626 VYVTLSNMYAEAGLQADAEE 645
            +V L   Y+  GL  +  E
Sbjct: 506 TFVALLTAYSHGGLVDEGSE 525



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 4/181 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS    L LGR+ H+L+ ++    + FV++SL+ MY+KCG +       ++      
Sbjct: 410 LRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSS 469

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N ++ GYA++         F ++    V  +H T+  +L        +DEG ++   
Sbjct: 470 VPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEI-LN 528

Query: 244 TMKLQYLSKTAVSNAL--LTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
           +M+ +Y     + +    + +Y + G ++ A+ + E +  Q + + W  ++   + HG+ 
Sbjct: 529 SMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNM 588

Query: 301 E 301
           E
Sbjct: 589 E 589


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 184/528 (34%), Positives = 309/528 (58%), Gaps = 13/528 (2%)

Query: 213 DVQPNHYTY-STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           D    H ++   +L +C     + +GK  HAQ + +   +    SN L+ MY KCG ++ 
Sbjct: 58  DFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDF 117

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ +  R+++SW  +I    Q+G+  + L L+  M+ +G   +E+T +  L +CA+
Sbjct: 118 ARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAA 177

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
                   + HA  IK  M L  FV TA++D+Y+  G + +A    + M    S V+W++
Sbjct: 178 KCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESM-PDRSVVTWSS 236

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
             AG+ +N+  E+A+  F +        D+F  SS++ AC+ L ++   +Q+++ + KS 
Sbjct: 237 MAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSG 296

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F SN+ V SSLI+ Y KCG  E++ +VF  +   +VV WN+MI   S++ R+ + +ILFE
Sbjct: 297 FCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFE 356

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           KM   G+ P + TF++VLSAC H GLV+ GQK F+ M KE+ + P   HYSCMVD L RA
Sbjct: 357 KMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRA 416

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G++  A   IS LP   +A +W  L A+CR H +L++AE  +K++ +++P ++  Y+ LS
Sbjct: 417 GQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLS 476

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           NMYA  G   +  + RKL+K  ++ KE G SWIE+ +K++ F    ++H ++ ++Y KL 
Sbjct: 477 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 536

Query: 692 QLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           ++M +++ +G+            ++ K++ + +HSE+LA   GL+ LP
Sbjct: 537 EVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLP 584



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 5/414 (1%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           FV E+L  C++ + L  G+  HA I    +  D   +  L+NMY+KCG +     V  +M
Sbjct: 66  FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P   + S N ++    +N   ++A    L++       + +T S++L  C +  A+ E +
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ 185

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            LHA  +K        V+ ALL +Y KCG+M+DA  VFE +  R+V++W+++  G+ Q+ 
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            YE+ L L     E G+  +++  +  + +CA L     G   +A + K G     FV +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVAS 305

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G I E+ K  +++ K  + V WNA I+G  R+ ++ E +  F +M +   +
Sbjct: 306 SLIDMYAKCGGIEESYKVFRDVEKR-NVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 364

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAER 477
            ++ T+ S+L AC  +  +   ++    + K      NV   S +++  ++ G   +A  
Sbjct: 365 PNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYD 424

Query: 478 VFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + S+L   A    W S++ +   +G    A +  +K+    I P NS    +LS
Sbjct: 425 LISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLF--DIEPHNSGNYLLLS 476



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  V+  C+    +  G++ +AL++K+  C + FV +SL++MYAKCG I+    V 
Sbjct: 265 DQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVF 324

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   ++   N +++G +++A   +    F K+  + + PN  T+ ++L+ CG +  + 
Sbjct: 325 RDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVR 384

Query: 236 EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           +G++      K  +L+      + ++    + G + +A  +   L    +   W +++  
Sbjct: 385 KGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLAS 444

Query: 294 FKQHGDYE 301
            + HG+ E
Sbjct: 445 CRTHGNLE 452


>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 765

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 216/639 (33%), Positives = 339/639 (53%), Gaps = 26/639 (4%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D  F   +L  C         +  H  I KT    D F+++ LV +YAKCG ++    V
Sbjct: 71  VDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQV 130

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSA 233
              M   +  +   L+ GY +N++   A   F + L   +  P++YT +  L  C SL +
Sbjct: 131 FDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTSLHS 190

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG-MMEDAESVFEGLVQRNVISWTAIIN 292
           +  G+QLHA  +K      T++ NAL ++Y KCG  +E   + F  + +++VISWTA I+
Sbjct: 191 LKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAIS 250

Query: 293 GFKQHGDYEKPLRLVC--LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
              + G+  K +R+    L+ E  + PNEYT T AL+ C  ++   +G   HA   K G 
Sbjct: 251 ACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGY 310

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN----------- 399
                V  +++ +Y   G I EA++  K M    + V+WNA IAG  +            
Sbjct: 311 ESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMIAGHAQMMELSKDNLSAY 369

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           QK  EA+  FS++ R+    D FT+SS+L  CS + +L   EQIH+R +K+ F S+V VG
Sbjct: 370 QKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVG 429

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           SS+I  YNKCGS E A +VF +++   ++ W +MI  ++Q+G +++A+ LFE M + GIR
Sbjct: 430 SSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIR 489

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   TF+ VLSAC  +G+V +    FE M KEY I P   HY C+VD+L R G+++ A  
Sbjct: 490 PNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFD 549

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            I  +  K +  IW  L   C    +L++    ++++L L P D   Y  L N Y  AG 
Sbjct: 550 LIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGR 609

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE------MPKVYEKLKQL 693
             D      +M+ ++I +    SWI + +++Y F + +K+  E      +  ++ K K L
Sbjct: 610 YDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIESSIGKSLEDLHIKAKNL 669

Query: 694 -MQQIEDIGHTDNEKEDR---VLYHSERLAVGFGLISLP 728
             + +E +  +D EKE      +YHSE+LA+ FGL +LP
Sbjct: 670 GYEMLEYVEKSDKEKEKTSSPTIYHSEKLAITFGLENLP 708



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 7/205 (3%)

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           RN K +EA   FS    ++   D   Y  +L+ C    S ++ + IH  IVK+    +  
Sbjct: 53  RNLKFQEA---FSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPF 109

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + S L+  Y KCG  E A++VF  +   + V+W +++K Y QN   + AI LFE+M++  
Sbjct: 110 LSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHS 169

Query: 518 -IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR-AGKLE 575
              P+N T    L+AC+    ++ G+++   ++K Y +  + +  + +  L  +  GKLE
Sbjct: 170 ECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIK-YHVDFDTSIGNALCSLYTKCGGKLE 228

Query: 576 IALIFISNLPIKPTAPIWRPLFAAC 600
           + L     +  K     W    +AC
Sbjct: 229 VGLTAFRRIKEKDVIS-WTAAISAC 252


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/624 (31%), Positives = 336/624 (53%), Gaps = 17/624 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKT-AVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQ 177
           I++L   +  + L+ GR  HA +T T     D  V    SL+N+Y KC ++     +   
Sbjct: 23  IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDE 236
           MP  ++ S + L+AGY +N    + F  F K+   D + PN Y  +T ++ C S   + E
Sbjct: 83  MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYV-E 141

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ H   +K        V NAL+ +Y KC  +  A  +   +   ++  +  ++NG  Q
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           H    + + ++ L+  +GI+ N  T+      CASL++  +G   HAQ++K  +    ++
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G++I+DMY   G +   +     + +S + VSW + IA +F+N+  EEA+  FS+M  + 
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRL-QSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDC 320

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +E+T + +  + + L +L   +Q+H+R  KS  + NV VG++LI  Y K G    A+
Sbjct: 321 IPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQ 380

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VFS +T  ++++WN++I  +S +G  ++A+ +F+ M+  G RP   TF+ V+ AC+H  
Sbjct: 381 SVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLK 440

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV +G   F  ++K++ I+P   HY+C+V LL R+G+L+ A  F+ +  I      WR L
Sbjct: 441 LVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTL 500

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             AC  H        I++ +L+L+P D   Y+ LSNM+A         E RKLM+ + + 
Sbjct: 501 LNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVK 560

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           KEPG SW+E+ N  + F S++  H E   +YE +K L+ +I  +G+            D 
Sbjct: 561 KEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIEDE 620

Query: 706 EKEDRVLYHSERLAVGFGLISLPA 729
           +K D + YHSE+LAV +GL+  P+
Sbjct: 621 QKVDNLSYHSEKLAVAYGLMKTPS 644



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 216/457 (47%), Gaps = 15/457 (3%)

Query: 53  NKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYST---RNDSFPDGFIDDGCSNTVPVTCY 109
           N + + + ++  + + N Y+  +E  I+R  + +   RN       +     N  P+  +
Sbjct: 49  NHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVF 108

Query: 110 SL-------ESLLDKQFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
            L       +++   ++VI   +S C  +  +E G++ H    K+ +   Q+V  +L+ +
Sbjct: 109 ELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQL 167

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y+KC D+ + + ++  +P  DI   N ++ G  ++    +A      +    ++ N+ TY
Sbjct: 168 YSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATY 227

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
            T+  +C SL  I  GKQ+HAQ +K        + ++++ MY KCG +    + F+ L  
Sbjct: 228 VTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQS 287

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           RNV+SWT+II  + Q+  +E+ L L   M  D I PNEYT  V   S A L    +G   
Sbjct: 288 RNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQL 347

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA+  K G+     VG A++ MY   G+I  A+     M    + ++WNA I G   +  
Sbjct: 348 HARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNM-TCCNIITWNAIITGHSHHGL 406

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGS 460
            +EA+  F  M+      +  T+  ++ AC+ L  +       + ++K  +    +   +
Sbjct: 407 GKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYT 466

Query: 461 SLIEAYNKCGSWEDAERVF-SQLTAADVVSWNSMIKA 496
            ++   ++ G  ++AE    S     DVVSW +++ A
Sbjct: 467 CIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLLNA 503


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 196/567 (34%), Positives = 302/567 (53%), Gaps = 50/567 (8%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR  HA+  K   C D FV +SL+NMY K G       V   MP  +  S   +++GYA 
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
             L  +A   F  +   +   N + ++++L+       ++ GKQ+H   +K   LS  +V
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+TMY KCG ++DA   FE    +N I+W+A+I G  Q GD +K L+L   M   GI
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGI 306

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E+TF   + +C+ L  +  G   H  ++K G     +V TA+VDMY+    I +A+K
Sbjct: 307 RPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARK 366

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + +    V W + I G+ +N + E+A+  + +M       +E T +S+LKACS L 
Sbjct: 367 GFDYL-QEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L   +QIH+R VK  F   V +GS+L   Y KCG  +D   VF ++ A DV+SWN+MI 
Sbjct: 426 ALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMIS 485

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQNG  ++A+ LFE+M +EG +P   TF+ +LSACSH GLV+ G   F  M  E+G+ 
Sbjct: 486 GLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMD 545

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+L RAGKL+ A+ F  +  I                             
Sbjct: 546 PRVEHYACMVDILSRAGKLKEAIEFTESATI----------------------------- 576

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
                               + G+  D E  R++MK++ +SKEPGCSWIE+ + ++ F  
Sbjct: 577 --------------------DHGMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVV 616

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           +++ H ++  ++ +L+QL +Q++D G+
Sbjct: 617 KDQMHPQIGDIHVELRQLSKQMKDEGY 643



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 248/512 (48%), Gaps = 47/512 (9%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P++ ++ T L       ++ +GK LHAQ +K    S   ++N+L+ +Y KC  + +A+ V
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 276 FEGLVQRNVISWTAIINGFKQHG--DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           FE +  ++V+SW  IING+ QHG       + L   MR +   PN +TF     + ++L 
Sbjct: 63  FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           ++  G + HA  IK       FVG+++++MY   G   EA+K    M +  +SVSW   I
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPER-NSVSWATMI 181

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+   +   EA+  F  M R +   +EF ++S+L A +L   +   +QIH   VK+   
Sbjct: 182 SGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLL 241

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S V VG++L+  Y KCGS +DA + F   +  + ++W++MI   +Q+G + KA+ LF  M
Sbjct: 242 SIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSM 301

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK----------------------- 550
            + GIRP+  TF+ V++ACS  G   +G++V + ++K                       
Sbjct: 302 HLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSI 361

Query: 551 -------EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAAC 600
                  +Y   P+   ++ M+    + G+ E AL     + ++   P       +  AC
Sbjct: 362 VDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKAC 421

Query: 601 RCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
              + L+  + I  + ++     +  +   LS MYA+ G   D     + M  +++    
Sbjct: 422 SSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDV---- 477

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
             SW    N +    SQN    E  +++E+++
Sbjct: 478 -ISW----NAMISGLSQNGCGKEALELFEEMQ 504



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 2/318 (0%)

Query: 116 DKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           + +FV   VLS  +  E +  G++ H +  K  +     V  +LV MYAKCG +   +  
Sbjct: 207 ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQT 266

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +     +  + + ++ G A++   D+A   F  +    ++P+ +T+  ++  C  L A 
Sbjct: 267 FETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAA 326

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EGKQ+H   +KL + S+  V  AL+ MY KC  + DA   F+ L + +++ WT++I G+
Sbjct: 327 WEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGY 386

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+G+ E  L L   M  +GI PNE T    L +C+SL     G   HA+ +K G  L  
Sbjct: 387 VQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEV 446

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +G+A+  MY+  G + +     + M  +   +SWNA I+G  +N   +EA+E F +M  
Sbjct: 447 PIGSALSTMYAKCGCLKDGTLVFRRM-PARDVISWNAMISGLSQNGCGKEALELFEEMQL 505

Query: 415 NDAACDEFTYSSILKACS 432
                D  T+ +IL ACS
Sbjct: 506 EGTKPDYVTFVNILSACS 523



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 39/275 (14%)

Query: 90  SFPDGFIDDGCSNTVPVTCYS---LESLLDKQFVI-EVLSYCSREECLELGRRYHALITK 145
           S   G++ +G  N   ++ Y    +E +L  +  +  VL  CS    LE G++ HA   K
Sbjct: 381 SMIGGYVQNG-ENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
                +  + ++L  MYAKCG +K    V ++MP  D+ S N +++G ++N    +A   
Sbjct: 440 YGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALEL 499

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG--------------KQLHAQTMKLQYLS 251
           F ++     +P++ T+  +L+ C  +  ++ G               ++      +  LS
Sbjct: 500 FEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILS 559

Query: 252 KTAVSNALL----TMYIKCGMMEDAESV-----FEGLVQRNVISWTAIINGFK------- 295
           +       +    +  I  GM ED E V       G+ +    SW  + +G         
Sbjct: 560 RAGKLKEAIEFTESATIDHGMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQ 619

Query: 296 ---QHGDYEKPLR-LVCLMREDGIDPNEYTFTVAL 326
              Q GD    LR L   M+++G +P   +F+ AL
Sbjct: 620 MHPQIGDIHVELRQLSKQMKDEGYEPATDSFSAAL 654


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 178/477 (37%), Positives = 283/477 (59%), Gaps = 12/477 (2%)

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VFE + +R+++SW  +I+G  Q+G +E  L +V  M    + P+ +T +  L   A   N
Sbjct: 152 VFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVN 211

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   H   I+ G     F+G++++DMY+    + ++ +    M      +SWN+ IA
Sbjct: 212 LLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFY-MLPQHDGISWNSIIA 270

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G  +N   +E ++ F QM+      +  ++SSI+ AC+ L +L   +Q+H  I++S+F+ 
Sbjct: 271 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDG 330

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           NV + S+L++ Y KCG+   A  +F ++   D+VSW +MI  Y+ +G A  AI LF++M 
Sbjct: 331 NVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRME 390

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           VEG++P    F+AVL+ACSH+GLV +  K F SM ++Y I+P   HY+ + DLLGR G+L
Sbjct: 391 VEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRL 450

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           E A  FIS++ I+PT  +W  L AACR H ++++AE +SK++  +DP +   YV LSN+Y
Sbjct: 451 EEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIY 510

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           + AG   DA + R  M+ K + K+P CSWIE+ NK++ F + +KSH    ++ E LK L+
Sbjct: 511 SAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLL 570

Query: 695 QQIEDIG---------HTDNEKEDRVLY--HSERLAVGFGLISLPAKNKFECSRTLE 740
           +Q+E  G         H   E++ R L   HSERLA+ FG+IS PA      ++ L 
Sbjct: 571 EQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLR 627



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 37/344 (10%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    +     D F+ +SL++MYAKC  +     V   +P  D  S N ++AG  +
Sbjct: 215 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 274

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N +FD+   FF ++    ++PNH ++S+++  C  L+ +  GKQLH   ++ ++     +
Sbjct: 275 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFI 334

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           ++AL+ MY KCG +  A  +F+ +   +++SWTA+I G+  HG     + L   M  +G+
Sbjct: 335 ASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV 394

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN   F   L +C     SH G                     +VD      E W+   
Sbjct: 395 KPNYVAFMAVLTAC-----SHAG---------------------LVD------EAWKYFN 422

Query: 376 QLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
            + +  +    +   A +A    R  + EEA E  S M           +S++L AC + 
Sbjct: 423 SMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGS---VWSTLLAACRVH 479

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            ++   E++  ++       N+     L   Y+  G W+DA ++
Sbjct: 480 KNIELAEKVSKKLFTVD-PQNIGAYVLLSNIYSAAGRWKDARKL 522



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 172/377 (45%), Gaps = 34/377 (9%)

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           + S+  V + MP  DI S N +++G A+N + + A     ++   D++P+ +T S++L I
Sbjct: 146 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 205

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
                 + +GK++H   ++  Y +   + ++L+ MY KC  ++D+  VF  L Q + ISW
Sbjct: 206 FAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISW 265

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            +II G  Q+G +++ L+    M    I PN  +F+  + +CA L   H+G   H  +I+
Sbjct: 266 NSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                  F+ +A+VDMY+  G I  A+    +M +    VSW A I G+  +    +AI 
Sbjct: 326 SRFDGNVFIASALVDMYAKCGNIRTARWIFDKM-ELYDMVSWTAMIMGYALHGHAYDAIS 384

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +M       +   + ++L ACS           H+ +V               EA+ 
Sbjct: 385 LFKRMEVEGVKPNYVAFMAVLTACS-----------HAGLVD--------------EAWK 419

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
              S     R+   L     V+         + GR  +A      M +E   PT S +  
Sbjct: 420 YFNSMTQDYRIIPGLEHYAAVA-----DLLGRVGRLEEAYEFISDMHIE---PTGSVWST 471

Query: 528 VLSACSHSGLVQDGQKV 544
           +L+AC     ++  +KV
Sbjct: 472 LLAACRVHKNIELAEKV 488



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 27/340 (7%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+H  + ++L  C  +  +  G+ +H   ++L         NAL+ MY K   +E     
Sbjct: 8   PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE----- 62

Query: 276 FEGLVQRNVISWTAIINGF---KQHGDYEKPLRLVCLMRED--GIDPNEYTFTVALASCA 330
            EG VQR   S   ++ G    ++ G       L C + E   GID N            
Sbjct: 63  -EGGVQRFCDS--KMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQN--------GDLN 111

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            + N       + +V   G     +        Y G      + +++ EM      VSWN
Sbjct: 112 QMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLG------SLRKVFEMMPKRDIVSWN 165

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I+G  +N   E+A+    +M   D   D FT SS+L   +   +L   ++IH   +++
Sbjct: 166 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN 225

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            ++++V +GSSLI+ Y KC   +D+ RVF  L   D +SWNS+I    QNG   + +  F
Sbjct: 226 GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFF 285

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           ++M++  I+P + +F +++ AC+H   +  G+++   +++
Sbjct: 286 QQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIR 325



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 124/292 (42%), Gaps = 48/292 (16%)

Query: 56  PKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFI--------------DDGCS 101
           P    LS+   IF  Y+N+  KG   +GY+ RN    D FI              DD C 
Sbjct: 194 PDSFTLSSVLPIFAEYVNLL-KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCR 252

Query: 102 -------------NTVPVTCYSLESLLD------KQFVI-----------EVLSYCSREE 131
                        N++   C     + D      +Q +I            ++  C+   
Sbjct: 253 VFYMLPQHDGISWNSIIAGCVQ-NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLT 311

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
            L LG++ H  I ++   G+ F+ ++LV+MYAKCG+I++   +  +M   D+ S   ++ 
Sbjct: 312 TLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIM 371

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYL 250
           GYA +     A S F +++   V+PN+  +  +L  C     +DE  K  ++ T   + +
Sbjct: 372 GYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRII 431

Query: 251 SKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGDYE 301
                  A+  +  + G +E+A E + +  ++     W+ ++   + H + E
Sbjct: 432 PGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIE 483


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/614 (31%), Positives = 332/614 (54%), Gaps = 13/614 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  GR  H  + +     D  V  +L+ MY KCGDI S   V  +MP  D
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N +  +    F  +    V P+  T +++++ C +L     G+++H 
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  ++++ +V+N+L+ M+   G  ++AE VF  +  ++++SWTA+I+G++++G  EK
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK 380

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M  +G+ P+E T    L++CA L     G M H    + G+     V  +++D
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    I +A +    +  + + +SW + I G   N ++ EA+  F QM+ +    +  
Sbjct: 441 MYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRSFEALFFFQQMILSLKP-NSV 498

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S+L AC+ + +L+  ++IH+  +++    +  + ++L++ Y +CG  E A   F+  
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS- 557

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV SWN ++  Y+Q G+   A+ LF KM+   + P   TF ++L ACS SG+V DG 
Sbjct: 558 CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + FESM  ++ I P   HY+ +VDLLGRAG+LE A  FI  +PI P   IW  L  ACR 
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + ++++ E  ++ I E+D      Y+ L N+YA++G   +    RK+M+   ++ +PGCS
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKEDRVL 712
           W+EV  +++ F + +  H ++ ++   L+   +++E  G            D  K +   
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFC 797

Query: 713 YHSERLAVGFGLIS 726
            HSERLA+ FGLI+
Sbjct: 798 GHSERLAIAFGLIN 811



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 255/471 (54%), Gaps = 11/471 (2%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L+  ++++  I +L  C  +     G R H+ ++KT       +  +L++M+ + GD+  
Sbjct: 88  LQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVE 147

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V  +M   D+ S N L+ GYAK   FD+A + + ++  + ++P+ YT+  +L  CG 
Sbjct: 148 AWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGG 207

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  +  G+++H   ++  + S   V NAL+TMY+KCG +  A  VF+ + +R+ ISW A+
Sbjct: 208 LPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G+ ++    + LRL  +MRE  +DP+  T T  +++C +L +  +G   H  VIK G 
Sbjct: 268 ISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGF 327

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                V  +++ M+S +G  W+  + +    +    VSW A I+G+ +N   E+A+E ++
Sbjct: 328 VAEVSVNNSLIQMHSSVG-CWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M       DE T +S+L AC+ L  L     +H    ++   S V V +SLI+ Y+KC 
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCR 446

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             + A  VF ++   +V+SW S+I     N R+ +A+  F++M++  ++P + T ++VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLS 505

Query: 531 ACSHSGLVQDGQKVFESMVKEY----GILPEEAHYSCMVDLLGRAGKLEIA 577
           AC+  G +  G+++    ++      G LP     + ++D+  R G++E A
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPA 551



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 4/413 (0%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +L +C    A  EG ++H+   K        + NALL+M+++ G + +A  VF  +
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +R++ SW  ++ G+ + G +++ L L   M   GI P+ YTF   L +C  L +   G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  VI+ G      V  A++ MY   G+I+ A+     M +    +SWNA I+G+F N
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRR-DRISWNAMISGYFEN 274

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               E +  F  M       D  T +S++ AC  L       ++H  ++K+ F + V V 
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +SLI+ ++  G W++AE VFS++   D+VSW +MI  Y +NG   KA+  +  M  EG+ 
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T  +VLSAC+  GL+  G  + E      G+       + ++D+  +   ++ AL 
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHE-FADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453

Query: 580 FISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQILELDPDDAAVYVTLS 631
               +P K     W  +    R  +   +   F  + IL L P+   +   LS
Sbjct: 454 VFHRIPNKNVIS-WTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 192/602 (31%), Positives = 316/602 (52%), Gaps = 14/602 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           ++FV +S+++   K G I     V   MP  D+   N ++ GY +   FD AF  F ++ 
Sbjct: 164 NRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMH 223

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G  ++P+  T ++++  CG +  +  GK +H   + L   +   V  + + MY K G +E
Sbjct: 224 GSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIE 283

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VF  +  RN++SW A+I+G  ++G   +   L   +       +  T    L  C+
Sbjct: 284 SARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCS 343

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              +   G + H   I R       + TAIVD+YS  G + +A      M K  + ++W 
Sbjct: 344 QTASLATGKILHGCAI-RSFESNLILSTAIVDLYSKCGSLKQATFVFNRM-KDRNVITWT 401

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A + G  +N   E+A+  F+QM     A +  T+ S++ +C+ L SL     IH  + + 
Sbjct: 402 AMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL 461

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIIL 509
            F  ++   ++L++ Y KCG    AER+FS  + + DVV WNSMI  Y  +G   +A+ +
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGI 521

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           + KM+ EG++P  +TFL++LSACSHS LV+ G  +F SM +++ I P E HY+C+VDLL 
Sbjct: 522 YHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLS 581

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+ E A   I  +P +P   +   L + CR H ++ +    S ++L LD  +  +Y+ 
Sbjct: 582 RAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIM 641

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN+YAEA      +  R LM+ + + K PG S +E  N ++ FF+ + SH    ++Y  
Sbjct: 642 LSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHF 701

Query: 690 LKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRT 738
           L+ L   +E  G+           D E + R+L+ HSERLA+ FGL++ PA +    ++ 
Sbjct: 702 LESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKN 761

Query: 739 LE 740
           L 
Sbjct: 762 LR 763



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 287/595 (48%), Gaps = 22/595 (3%)

Query: 96  IDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVT 155
           + DG  N +P   ++  SLL +             + L   +  HA I   ++  DQFV 
Sbjct: 19  LKDGQFNQLPTIIHNFLSLLRES-----------SKNLIWVKSTHAQIITNSLSTDQFVA 67

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
             LV  Y+    +++   V  Q        CN +L GY ++  + +    F  +   +++
Sbjct: 68  TKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLE 127

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
            +  + +  L  C S    + G ++ +  ++        V +++++  +K G + +A+ V
Sbjct: 128 VDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRV 187

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+G+  ++V+ W +II G+ Q G ++   +L   M   GI P+  T T  + +C  + N 
Sbjct: 188 FDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNL 247

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   H  V+  G+     V T+ VDMYS +G+I  A+    +M  + + VSWNA I+G
Sbjct: 248 KLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM-PTRNLVSWNAMISG 306

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             RN    E+ + F ++VR+    D  T  S+L+ CS   SLAT + +H   ++S FESN
Sbjct: 307 CVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESN 365

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + + +++++ Y+KCGS + A  VF+++   +V++W +M+   +QNG A  A+ LF +M  
Sbjct: 366 LILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQE 425

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           EGI   + TF++++ +C+H G ++ G+ +   + +  G   +  + + +VD+  + GK+ 
Sbjct: 426 EGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR-LGFAFDIVNMTALVDMYAKCGKIN 484

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS-- 631
           +A    S+  I     +W  +      H     A  I  +++E  L P+       LS  
Sbjct: 485 LAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSAC 544

Query: 632 --NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             +   E G+      +R    ++ I K   C  +++ ++  RF        +MP
Sbjct: 545 SHSRLVEQGISLFNSMERD-HNIRPIEKHYAC-LVDLLSRAGRFEEAQALIEKMP 597


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/587 (33%), Positives = 318/587 (54%), Gaps = 12/587 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D FV +++V  Y K   + +   V   M   D    N +++G  KN+ FD+A   F  + 
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              +  +  T + +L     L  +  G  +    MK+ + S   V   L  +Y KCG +E
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F  + Q +++S+ A+I+G+  + + E  +RL   +   G   N  +    +    
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              + H+    H    K G+     V TA+  +YS L EI E+ + L +     S  SWN
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEI-ESARLLFDESSEKSLASWN 378

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+G+ +N  TE+AI  F +M + +   +  T +SIL AC+ L +L+  + +H  I + 
Sbjct: 379 AMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRE 438

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            FESN+ V ++LI+ Y KCGS  +A+R+FS +   + V+WN+MI  Y  +G   +A+ LF
Sbjct: 439 SFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLF 498

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M+   + PT  TFL+VL ACSH+GLV++G ++F SMV ++G  P   HY+CMVDLLGR
Sbjct: 499 NEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGR 558

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG L+ AL FI  +P++P  P+W  L  AC  H D  +A   S ++ ELDP +   YV L
Sbjct: 559 AGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLL 618

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+Y+      +A   R ++K ++++K PGC+ IEV N ++ F S ++SH +   +Y  L
Sbjct: 619 SNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIYAML 678

Query: 691 KQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           ++L  ++ + G             + EKE  V  HSE+LA+ FGLI+
Sbjct: 679 EKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIAFGLIT 725


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 200/636 (31%), Positives = 328/636 (51%), Gaps = 22/636 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L   R  H    +  +  D FV+ +LV++YAKC   +    V ++MP  D
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N +LAGYA +  +    +  L +   D  PN  T   +L +     A+ +G+ +HA
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGALSQGRAVHA 253

Query: 243 QTMKLQYLSK----TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +++   L        V  ALL MY KCG +  A  VFE +  RN ++W+A++ GF   G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 299 DYEKPLRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
              +   L   M   G+    P   +   AL +CA+L +  +G   HA + K G+     
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALLAKSGLHTDLT 371

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G +++ MY+  G I +A     +M     +VS++A ++G+ +N K +EA   F +M   
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQM-VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   D  T  S++ ACS L +L   +  H  ++     S   + ++LI+ Y KCG  + +
Sbjct: 431 NVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLS 490

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F  + A D+VSWN+MI  Y  +G  ++A  LF  M  +   P + TF+ ++SACSHS
Sbjct: 491 RQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHS 550

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV +G++ F  M  +YGI P   HY  MVDLL R G L+ A  FI  +P+K    +W  
Sbjct: 551 GLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGA 610

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  ACR H ++ + + +S  I +L P+    +V LSN+++ AG   +A E R + K +  
Sbjct: 611 LLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGF 670

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-------- 707
            K PGCSWIE+   ++ F   ++SH++  ++Y++L  ++  I  +G+  +          
Sbjct: 671 KKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEE 730

Query: 708 ---EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              E  +LYHSE+LA+ FG+++L        ++ L 
Sbjct: 731 EEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLR 766



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 232/497 (46%), Gaps = 14/497 (2%)

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           CGD+     +  Q+P   I   N L+  Y+          +         QPN+YT+  +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L  C +L  +   + +H    +    +   VS AL+ +Y KC     A +VF  +  R+V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W A++ G+  HG Y   +  + LM++D   PN  T    L   A       G   HA 
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 345 VIKRGMALGD-----FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
            + R  +L D      VGTA++DMY+  G +  A +  + M    + V+W+A + GF   
Sbjct: 255 SV-RACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVGGFVLC 312

Query: 400 QKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
            +  EA   F  M+          + +S L+AC+ L  L   +Q+H+ + KS   +++  
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           G+SL+  Y K G  + A  +F Q+   D VS+++++  Y QNG+A +A  +F KM    +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P  +T ++++ ACSH   +Q G+    S++   GI  E +  + ++D+  + G+++++ 
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYAKCGRIDLSR 491

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTLSNMYAE 636
                +P +     W  + A    H   K A   F+  +    +PDD   ++ L +  + 
Sbjct: 492 QIFDVMPARDIVS-WNTMIAGYGIHGLGKEATALFLDMKHQACEPDD-VTFICLISACSH 549

Query: 637 AGLQADAEEQRKLMKMK 653
           +GL  + +    +M  K
Sbjct: 550 SGLVTEGKRWFHMMAHK 566



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 16/304 (5%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V   L  C+    L LG++ HAL+ K+ +  D     SL++MYAK G I     +  QM 
Sbjct: 338 VASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMV 397

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  S + L++GY +N   D+AF  F K+   +VQP+  T  +++  C  L+A+  GK 
Sbjct: 398 VKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKC 457

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
            H   +     S+T++ NAL+ MY KCG ++ +  +F+ +  R+++SW  +I G+  HG 
Sbjct: 458 GHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGL 517

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMA-- 351
            ++   L   M+    +P++ TF   +++C     SH G +      FH    K G+   
Sbjct: 518 GKEATALFLDMKHQACEPDDVTFICLISAC-----SHSGLVTEGKRWFHMMAHKYGITPR 572

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           +  ++G  +VD+ +  G + EA + ++ M   A    W A + G  R  K  +  +  S 
Sbjct: 573 MEHYIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVWGA-LLGACRVHKNIDLGKQVSS 629

Query: 412 MVRN 415
           M++ 
Sbjct: 630 MIQQ 633



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  CS    L+ G+  H  +    +  +  +  +L++MYAKCG I     + 
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIF 494

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  DI S N ++AGY  + L  +A + FL +     +P+  T+  +++ C     + 
Sbjct: 495 DVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVT 554

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EGK+  H    K     +      ++ +  + G +++A    +G+ ++ +V  W A++  
Sbjct: 555 EGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGA 614

Query: 294 FKQHGDYE 301
            + H + +
Sbjct: 615 CRVHKNID 622


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 317/615 (51%), Gaps = 12/615 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +  HA + +  +  D ++   ++      G       V  Q+   +I   N ++ G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             FD A   +  + G    PN++T   +L  C     +  G ++H+  +K  Y     V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            +LL++Y+KC   +DA  VF+ +  +NV+SWTAII G+   G + + +     + E G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ ++    LA+CA L +   G      +   GM    FV T+++DMY   G +  A   
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M +    VSW+  I G+  N   ++A++ F QM   +   D +T   +L AC+ L +
Sbjct: 273 FSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L       S + +++F SN  +G++LI+ Y+KCGS   A  +F+ +   D V WN+M+  
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVG 391

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            S NG A+    LF  +   GIRP  +TF+ +L  C+H G V +G++ F +M + + + P
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY CMVDLLGRAG L  A   I+N+P+KP A +W  L   C+ H D  +AE + K++
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +EL+P ++  YV LSN+Y+      +AE+ R  MK ++I K   CSWIE+   ++ F   
Sbjct: 512 IELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVG 571

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           +KSH    K+Y KL +L ++++ +GH            + EKE  + YHSE+LAV FGLI
Sbjct: 572 DKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLI 631

Query: 726 SLPAKNKFECSRTLE 740
           + P  +     + L 
Sbjct: 632 ASPPNHVIRVVKNLR 646



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 6/370 (1%)

Query: 212 IDVQPNHYTYSTMLAI----CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           I   P+   +S  L I       L+  ++ K +HA+ ++L       + N +L   +  G
Sbjct: 3   ILTNPSSPVFSKALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFG 62

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
               ++ VF  + + N+  W  +I G      ++  + L   MR  G  PN +T    L 
Sbjct: 63  STNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLK 122

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +CA   +  +G   H+ ++K G     FV T+++ +Y       +A K   ++    + V
Sbjct: 123 ACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDI-PDKNVV 181

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SW A I G+  +    EAI AF +++      D F+   +L AC+ L    + E I   I
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
             S    NV V +SL++ Y KCG+ E A  +FS +   D+VSW++MI+ Y+ NG  ++A+
Sbjct: 242 SDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQAL 301

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF +M  E ++P   T + VLSAC+  G +  G     S++     L      + ++D+
Sbjct: 302 DLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWA-SSLMDRNEFLSNPVLGTALIDM 360

Query: 568 LGRAGKLEIA 577
             + G +  A
Sbjct: 361 YSKCGSVTQA 370



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 161/322 (50%), Gaps = 4/322 (1%)

Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
             L   F I  VL  C+R+  + LG + H+L+ K     D FV  SL+++Y KC +    
Sbjct: 109 GFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + V   +P  ++ S   ++ GY  +  F +A   F KL  + ++P+ ++   +LA C  L
Sbjct: 169 LKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                G+ +              V+ +LL MY+KCG +E A  +F  + +++++SW+ +I
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+  +G  ++ L L   M+ + + P+ YT    L++CA+L    +G ++ + ++ R   
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEF 347

Query: 352 LGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           L + V GTA++DMYS  G + +A +    M K    V WNA + G   N   +     FS
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAM-KKKDRVVWNAMMVGLSMNGHAKAVFSLFS 406

Query: 411 QMVRNDAACDEFTYSSILKACS 432
            + ++    DE T+  +L  C+
Sbjct: 407 LVEKHGIRPDENTFIGLLCGCT 428



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 3/296 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++VL+ C+R      G      I+ + +  + FV  SL++MY KCG+++    +   MP
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI S + ++ GYA N L  QA   F ++   +++P+ YT   +L+ C +L A+D G  
Sbjct: 278 EKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW 337

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
             +   + ++LS   +  AL+ MY KCG +  A  +F  + +++ + W A++ G   +G 
Sbjct: 338 ASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGH 397

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
            +    L  L+ + GI P+E TF   L  C      + G  F    +KR  +L   +   
Sbjct: 398 AKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSLTPSIEHY 456

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +VD+    G + EA + +  M    ++V W A + G   ++ T  A +   +++
Sbjct: 457 GCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 225/738 (30%), Positives = 379/738 (51%), Gaps = 41/738 (5%)

Query: 13  TSSFTFPYPVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYM 72
           T++ +   P V  ++   C  +K+  + + F        F KS     LS +  +FN   
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS---GSLSYARKVFN--- 267

Query: 73  NIEEK-GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLD---KQFVIEVLSY-- 126
            +E +  ++ NG          G +              + S++D   + +VI + S+  
Sbjct: 268 QMETRNAVTLNGLMV-------GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320

Query: 127 --CSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
              + E  L+ GR  H  +  T +      +   LVNMYAKCG I     V   M   D 
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N ++ G  +N  F +A   +  +   D+ P  +T  + L+ C SL     G+Q+H +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
           ++KL      +VSNAL+T+Y + G + +   +F  + + + +SW +II    +  +   P
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR-SERSLP 499

Query: 304 LRLVCLM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             +VC +  +  G   N  TF+  L++ +SL    +G   H   +K  +A       A++
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
             Y   GE+   +K    M +   +V+WN+ I+G+  N+   +A++    M++     D 
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           F Y+++L A + + +L    ++H+  V++  ES+V VGS+L++ Y+KCG  + A R F+ 
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQD 540
           +   +  SWNSMI  Y+++G+  +A+ LFE M ++G  P +  TF+ VLSACSH+GL+++
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G K FESM   YG+ P   H+SCM D+LGRAG+L+    FI  +P+KP   IWR +  AC
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799

Query: 601 RCHSDLKMAEFISK---QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            C ++ + AE   K    + +L+P++A  YV L NMYA  G   D  + RK MK  ++ K
Sbjct: 800 -CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
           E G SW+ + + ++ F + +KSH +   +Y+KLK+L +++ D G+               
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQEN 918

Query: 707 KEDRVLYHSERLAVGFGL 724
           KE+ + YHSE+LAV F L
Sbjct: 919 KEEILSYHSEKLAVAFVL 936



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 20/463 (4%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R +H+ + K  +  D ++  +L+N Y + GD  S   V  +MP  +  S  C+++GY++N
Sbjct: 21  RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE--GKQLHAQTMKLQYLSKTA 254
               +A  F   +    +  N Y + ++L  C  + ++    G+Q+H    KL Y     
Sbjct: 81  GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140

Query: 255 VSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           VSN L++MY KC G +  A   F  +  +N +SW +II+ + Q GD     R+   M+ D
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           G  P EYTF   + +  SL    +  +      + K G+    FVG+ +V  ++  G + 
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+K   +M ++ ++V+ N  + G  R +  EEA + F  M     +  + +  S +   
Sbjct: 261 YARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDM----NSMIDVSPESYVILL 315

Query: 432 SLLPSLATCE--------QIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           S  P  +  E        ++H  ++ +   +  V +G+ L+  Y KCGS  DA RVF  +
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           T  D VSWNSMI    QNG   +A+  ++ M    I P + T ++ LS+C+     + GQ
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           ++    +K  GI    +  + ++ L    G L       S++P
Sbjct: 436 QIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 155/662 (23%), Positives = 287/662 (43%), Gaps = 54/662 (8%)

Query: 45  SYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTV 104
           S SA ++F++ P R  +S + ++          G SRNG       F    + +G     
Sbjct: 52  SVSARKVFDEMPLRNCVSWACIV---------SGYSRNGEHKEALVFLRDMVKEG----- 97

Query: 105 PVTCYSLESLLDKQFV-IEVLSYCSREECLEL--GRRYHALITKTAVCGDQFVTASLVNM 161
                    +   Q+  + VL  C     + +  GR+ H L+ K +   D  V+  L++M
Sbjct: 98  ---------IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148

Query: 162 YAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           Y KC G +   +     +   +  S N +++ Y++      AF  F  +     +P  YT
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208

Query: 221 YSTMLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + +++    SL+  D    +Q+     K   L+   V + L++ + K G +  A  VF  
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA-----SCASLR 333
           +  RN ++   ++ G  +    E+  +L   M    ID +  ++ + L+     S A   
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEV 327

Query: 334 NSHMGYMFHAQVIKRGMALGDF---VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
               G   H  VI  G+   DF   +G  +V+MY+  G I +A++    M     SVSWN
Sbjct: 328 GLKKGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFM-TDKDSVSWN 384

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + I G  +N    EA+E +  M R+D     FT  S L +C+ L      +QIH   +K 
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR-KAIIL 509
             + NV V ++L+  Y + G   +  ++FS +   D VSWNS+I A +++ R+  +A++ 
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F      G +    TF +VLSA S     + G+++    +K   I  E    + ++   G
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYG 563

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KMAEFISKQILELDPDDAAVY 627
           + G+++      S +  +     W  + +    H++L  K  + +   +      D+ +Y
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNELLAKALDLVWFMLQTGQRLDSFMY 622

Query: 628 VTLSNMYA-----EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
            T+ + +A     E G++  A   R  ++   +    G + +++Y+K  R     +  + 
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVV---VGSALVDMYSKCGRLDYALRFFNT 679

Query: 683 MP 684
           MP
Sbjct: 680 MP 681


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 205/623 (32%), Positives = 339/623 (54%), Gaps = 41/623 (6%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H L  K     D +V ASL+++Y++   + +   +  +MP  D+ S N +++GY +
Sbjct: 102 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 161

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +    +A +    L  +D      T  ++L+ C      + G  +H+ ++K    S+   
Sbjct: 162 SGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE--- 214

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL---MRE 312
                       ++ D + VF+ +  R++ISW +II  ++ +   E+PLR + L   MR 
Sbjct: 215 ------------LLRDCQKVFDRMYVRDLISWNSIIKAYELN---EQPLRAISLFQEMRL 259

Query: 313 DGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
             I P+  T  ++LAS  S L +           +++G  L D  +G A+V MY+ LG +
Sbjct: 260 SRIQPDCLTL-ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 318

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILK 429
             A+     +  +   +SWN  I+G+ +N    EAIE ++ M    + A ++ T+ S+L 
Sbjct: 319 DSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 377

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS   +L    ++H R++K+    +V V +SL + Y KCG  EDA  +F Q+   + V 
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 437

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN++I  +  +G   KA++LF++M+ EG++P + TF+ +LSACSHSGLV +GQ  FE M 
Sbjct: 438 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 497

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            +YGI P   HY CMVD+ GRAG+LE AL FI ++ ++P A IW  L +ACR H ++ + 
Sbjct: 498 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 557

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           +  S+ + E++P+    +V LSNMYA AG     +E R +   K + K PG S +EV NK
Sbjct: 558 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 617

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
           +  F++ N++H    ++Y +L  L  +++ IG+            D+EKE  ++ HSERL
Sbjct: 618 VEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERL 677

Query: 719 AVGFGLISLPAKNKFECSRTLEY 741
           A+ F LI+ PAK      + L Y
Sbjct: 678 AIAFALIATPAKTTIRIFKNLRY 700



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 235/490 (47%), Gaps = 35/490 (7%)

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAK---NALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           KS +     +   D+ + N +++GY +   ++   + FS F+   G+   P++ T+ ++L
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL--TPDYRTFPSVL 93

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C     + +G ++H   +K  ++    V+ +L+ +Y +   + +A  +F+ +  R++ 
Sbjct: 94  KAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 150

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I+G+ Q G+ ++ L L   +R      +  T    L++C    + + G   H+  
Sbjct: 151 SWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYS 206

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           IK G+                  E+    +++ +       +SWN+ I  +  N++   A
Sbjct: 207 IKHGLE----------------SELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 250

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS-RIVKSKFESNVHVGSSLIE 464
           I  F +M  +    D  T  S+    S L  +  C  +    + K  F  ++ +G++++ 
Sbjct: 251 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 310

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNS 523
            Y K G  + A  VF+ L   DV+SWN++I  Y+QNG A +AI ++  M  EG I     
Sbjct: 311 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 370

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           T+++VL ACS +G ++ G K+   ++K  G+  +    + + D+ G+ G+LE AL     
Sbjct: 371 TWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQ 429

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQA 641
           +P   + P W  L A    H   + A  + K++L+  + PD    +VTL +  + +GL  
Sbjct: 430 IPRVNSVP-WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH-ITFVTLLSACSHSGLVD 487

Query: 642 DAEEQRKLMK 651
           + +   ++M+
Sbjct: 488 EGQWCFEMMQ 497



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  CS+   L  G + H  + K  +  D FV  SL +MY KCG ++  +++  Q+P 
Sbjct: 373 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 432

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++    N L+A +  +   ++A   F ++    V+P+H T+ T+L+ C     +DEG Q 
Sbjct: 433 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QW 491

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             + M+  Y    ++ +   ++ MY + G +E A    + + +Q +   W A+++  + H
Sbjct: 492 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 551

Query: 298 GDYE 301
           G+ +
Sbjct: 552 GNVD 555


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/614 (31%), Positives = 333/614 (54%), Gaps = 13/614 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  GR  H  + +     D  V  +L+ MY KCGDI S   V  +MP  D
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N +  +    F  +    V P+  T +++++ C +L     G+++H 
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  ++++ +V+N+L+ M+   G  ++AE VF  +  ++++SWTA+I+G++++G  EK
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK 380

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M  +G+ P+E T    L++CA L     G M H    + G+     V  +++D
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    I +A +    +  + + +SW + I G   N ++ EA+  F QM+ +    +  
Sbjct: 441 MYSKCRCIDKALEVFHRI-PNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSV 498

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S+L AC+ + +L+  ++IH+  +++    +  + ++L++ Y +CG  E A   F+  
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS- 557

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV SWN ++  Y+Q G+   A+ LF KM+   + P   TF ++L ACS SG+V DG 
Sbjct: 558 CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + FESM  ++ I P   HY+ +VDLLGRAG+LE A  FI  +PI P   IW  L  ACR 
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRI 677

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + ++++ E  ++ I E+D      Y+ L N+YA++G   +    RK+M+   ++ +PGCS
Sbjct: 678 YQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCS 737

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
           W+EV  +++ F + +  H ++ ++   L+   +++E  G +          D  K +   
Sbjct: 738 WVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFC 797

Query: 713 YHSERLAVGFGLIS 726
            HSERLA+ FGLI+
Sbjct: 798 GHSERLAIAFGLIN 811



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 255/471 (54%), Gaps = 11/471 (2%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L+  ++++  I +L  C  +     G R H+ ++KT       +  +L++M+ + GD+  
Sbjct: 88  LQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVE 147

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V  +M   D+ S N L+ GYAK   FD+A + + ++  + ++P+ YT+  +L  CG 
Sbjct: 148 AWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGG 207

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  +  G+++H   ++  + S   V NAL+TMY+KCG +  A  VF+ + +R+ ISW A+
Sbjct: 208 LPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAM 267

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I+G+ ++    + LRL  +MRE  +DP+  T T  +++C +L +  +G   H  VIK G 
Sbjct: 268 ISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGF 327

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                V  +++ M+S +G  W+  + +    +    VSW A I+G+ +N   E+A+E ++
Sbjct: 328 VAEVSVNNSLIQMHSSVG-CWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYT 386

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M       DE T +S+L AC+ L  L     +H    ++   S V V +SLI+ Y+KC 
Sbjct: 387 IMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCR 446

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             + A  VF ++   +V+SW S+I     N R+ +A+  F++M++  ++P + T ++VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLS 505

Query: 531 ACSHSGLVQDGQKVFESMVKEY----GILPEEAHYSCMVDLLGRAGKLEIA 577
           AC+  G +  G+++    ++      G LP     + ++D+  R G++E A
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPA 551



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 4/413 (0%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +L +C    A  EG ++H+   K        + NALL+M+++ G + +A  VF  +
Sbjct: 96  TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +R++ SW  ++ G+ + G +++ L L   M   GI P+ YTF   L +C  L +   G 
Sbjct: 156 AERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGR 215

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  VI+ G      V  A++ MY   G+I+ A+     M +    +SWNA I+G+F N
Sbjct: 216 EVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRR-DRISWNAMISGYFEN 274

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               E +  F  M       D  T +S++ AC  L       ++H  ++K+ F + V V 
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +SLI+ ++  G W++AE VFS++   D+VSW +MI  Y +NG   KA+  +  M  EG+ 
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P   T  +VLSAC+  GL+  G  + E      G+       + ++D+  +   ++ AL 
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHE-FADRTGLTSYVIVANSLIDMYSKCRCIDKALE 453

Query: 580 FISNLPIKPTAPIWRPLFAACRC-HSDLKMAEFISKQILELDPDDAAVYVTLS 631
               +P K     W  +    R  +   +   F  + IL L P+   +   LS
Sbjct: 454 VFHRIPNKNVIS-WTSIILGLRLNYRSFEALFFFQQMILSLKPNSVTLVSVLS 505


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 317/615 (51%), Gaps = 12/615 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +  HA + +  +  D ++   ++      G       V  Q+   +I   N ++ G    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             FD A   +  + G    PN++T   +L  C     +  G ++H+  +K  Y     V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            +LL++Y+KC   +DA  VF+ +  +NV+SWTAII G+   G + + +     + E G+ 
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ ++    LA+CA L +   G      +   GM    FV T+++DMY   G +  A   
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M +    VSW+  I G+  N   ++A++ F QM   +   D +T   +L AC+ L +
Sbjct: 273 FSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L       S + +++F SN  +G++LI+ Y+KCGS   A  +F+ +   D V WN+M+  
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVG 391

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            S NG A+    LF  +   GIRP  +TF+ +L  C+H G V +G++ F +M + + + P
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY CMVDLLGRAG L  A   I+N+P+KP A +W  L   C+ H D  +AE + K++
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKL 511

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +EL+P ++  YV LSN+Y+      +AE+ R  MK ++I K   CSWIE+   ++ F   
Sbjct: 512 IELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVG 571

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           +KSH    K+Y KL +L ++++ +GH            + EKE  + YHSE+LAV FGLI
Sbjct: 572 DKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSEKLAVAFGLI 631

Query: 726 SLPAKNKFECSRTLE 740
           + P  +     + L 
Sbjct: 632 ASPPNHVIRVVKNLR 646



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 167/348 (47%), Gaps = 2/348 (0%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L+  ++ K +HA+ ++L       + N +L   +  G    ++ VF  + + N+  W  
Sbjct: 25  GLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNT 84

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G      ++  + L   MR  G  PN +T    L +CA   +  +G   H+ ++K G
Sbjct: 85  MIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAG 144

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FV T+++ +Y       +A K   ++    + VSW A I G+  +    EAI AF
Sbjct: 145 YDHDVFVKTSLLSLYVKCDNFDDALKVFDDI-PDKNVVSWTAIITGYISSGHFREAIGAF 203

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            +++      D F+   +L AC+ L    + E I   I  S    NV V +SL++ Y KC
Sbjct: 204 KKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC 263

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G+ E A  +FS +   D+VSW++MI+ Y+ NG  ++A+ LF +M  E ++P   T + VL
Sbjct: 264 GNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVL 323

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           SAC+  G +  G     S++     L      + ++D+  + G +  A
Sbjct: 324 SACATLGALDLGIWA-SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQA 370



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 161/322 (50%), Gaps = 4/322 (1%)

Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
             L   F I  VL  C+R+  + LG + H+L+ K     D FV  SL+++Y KC +    
Sbjct: 109 GFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + V   +P  ++ S   ++ GY  +  F +A   F KL  + ++P+ ++   +LA C  L
Sbjct: 169 LKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                G+ +              V+ +LL MY+KCG +E A  +F  + +++++SW+ +I
Sbjct: 229 GDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMI 288

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+  +G  ++ L L   M+ + + P+ YT    L++CA+L    +G ++ + ++ R   
Sbjct: 289 QGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEF 347

Query: 352 LGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           L + V GTA++DMYS  G + +A +    M K    V WNA + G   N   +     FS
Sbjct: 348 LSNPVLGTALIDMYSKCGSVTQAWEIFTAM-KRKDRVVWNAMMVGLSMNGHAKAVFSLFS 406

Query: 411 QMVRNDAACDEFTYSSILKACS 432
            + ++    DE T+  +L  C+
Sbjct: 407 LVEKHGIRPDENTFIGLLCGCT 428



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 145/296 (48%), Gaps = 3/296 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++VL+ C+R      G      I+ + +  + FV  SL++MY KCG+++    +   MP
Sbjct: 218 LVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMP 277

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI S + ++ GYA N L  QA   F ++   +++P+ YT   +L+ C +L A+D G  
Sbjct: 278 EKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW 337

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
             +   + ++LS   +  AL+ MY KCG +  A  +F  + +++ + W A++ G   +G 
Sbjct: 338 ASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGH 397

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
            +    L  L+ + GI P+E TF   L  C      + G  F    +KR  +L   +   
Sbjct: 398 AKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSLTPSIEHY 456

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +VD+    G + EA + +  M    ++V W A + G   ++ T  A +   +++
Sbjct: 457 GCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 201/614 (32%), Positives = 328/614 (53%), Gaps = 11/614 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+R   L+ GR  H ++ K  +  D +   SLV  YAK G ++    V   MP  D
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I + N ++ GY  N L   A + F ++ D ++VQ +       LA C    +  +GK++H
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++        V  +LL MY KCG +  A SVF  +  R V++W  +I G+  +   +
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +       MR +G+     T    LA+CA   +S  G   H  V++R       + TA++
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MY  +G++  ++K   ++    + VSWN  IA +   +   EAI  F +++      D 
Sbjct: 353 EMYGKVGKVESSEKIFGKIANK-TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT S+++ A  LL SL  C QIHS I+   +  N  + ++++  Y + G    +  +F +
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           + + DV+SWN+MI  Y+ +G+ + A+ +F++M   G++P  STF++VL+ACS SGLV +G
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
              F  M++EYG++P+  HY CM DLLGR G L   L FI ++PI PT+ +W  L  A R
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASR 591

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
             +D+ +AE+ +++I +L+ D+   Y+ LS+MYA+AG   D E  R LMK K + +    
Sbjct: 592 NQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPI 651

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY-------- 713
           S +E+++    F + + SHS+   ++E    L ++IE+   T N+     +         
Sbjct: 652 SLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDDTRNQSYPVPVATRTTTMPN 711

Query: 714 -HSERLAVGFGLIS 726
            HS RLAV FGLIS
Sbjct: 712 KHSVRLAVVFGLIS 725



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           + SLV   A  G +   V  +  +   D    N ++ G+A   L   A + +  +     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+ +T+  ++  C  L  +DEG+  H   +KL         N+L+  Y K G++EDAE 
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTV--ALASCAS 331
           VF+G+  R++++W  +++G+  +G     L L C     D ++    +  +  ALA+C  
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNG--LGSLALACFQEMHDALEVQHDSVGIIAALAACCL 221

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
             +S  G   H  VI+ G+     VGT+++DMY   GE+  A+     M    + V+WN 
Sbjct: 222 EVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM-PLRTVVTWNC 280

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I G+  N++ +EA + F QM       +  T  ++L AC+   S      +H  +V+ +
Sbjct: 281 MIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ 340

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F  +V + ++L+E Y K G  E +E++F ++    +VSWN+MI AY       +AI LF 
Sbjct: 341 FLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFL 400

Query: 512 KMVVEGIRPTNSTFLAVLSA 531
           +++ + + P   T   V+ A
Sbjct: 401 ELLNQPLYPDYFTMSTVVPA 420



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 7/350 (2%)

Query: 89  DSFPDGFIDDGCSNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALI 143
           ++  DG++ +G   ++ + C+     +LE   D   +I  L+ C  E     G+  H  +
Sbjct: 177 NTMVDGYVSNGL-GSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYV 235

Query: 144 TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
            +  +  D  V  SL++MY KCG++    +V   MP   + + NC++ GYA N   D+AF
Sbjct: 236 IRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAF 295

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             F+++    +Q    T   +LA C    +   G+ +H   ++ Q+L    +  ALL MY
Sbjct: 296 DCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMY 355

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            K G +E +E +F  +  + ++SW  +I  +     Y + + L   +    + P+ +T +
Sbjct: 356 GKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMS 415

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             + +   L +       H+ +I  G A    +  A++ MY+  G++  +++   +M  S
Sbjct: 416 TVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM-VS 474

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
              +SWN  I G+  + + + A+E F +M  N    +E T+ S+L ACS+
Sbjct: 475 KDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 5/206 (2%)

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N  I GF        A+ A+  M+ + A  D FT+  ++K C+ L  L      H  ++K
Sbjct: 76  NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              E +V+  +SL+  Y K G  EDAERVF  +   D+V+WN+M+  Y  NG    A+  
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALAC 195

Query: 510 FEKM--VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           F++M   +E ++  +   +A L+AC        G+++   +++ +G+  +    + ++D+
Sbjct: 196 FQEMHDALE-VQHDSVGIIAALAACCLEVSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDM 253

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIW 593
             + G++  A    + +P++ T   W
Sbjct: 254 YCKCGEVAYARSVFATMPLR-TVVTW 278



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 5/129 (3%)

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL+ +    G  ++A    + +   D    N MI+ ++  G    A+  +  M+ +G RP
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC--MVDLLGRAGKLEIAL 578
              TF  V+  C+  G + +G+     MV + G+  E   Y+C  +V    + G +E A 
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAA-HGMVIKLGL--EHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 579 IFISNLPIK 587
                +P++
Sbjct: 163 RVFDGMPVR 171


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/666 (29%), Positives = 336/666 (50%), Gaps = 76/666 (11%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + F   SL+++YAK G +     V  +MP  D  S   ++ G  ++  F  A   FL + 
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC---- 266
                P+ +T + +L+ C ++ A   G+++H   +KL   S   V+N++L MY KC    
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 267 ---------------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
                                      G ME A S+FE +V+R+++SW  II G+ Q+G 
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 300 YEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
               L+    ++    ++P+ +T T  L++CA+LR   MG   H+ +++ GM     +  
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 359 AIVDMYSGLGEIWEAKKQLKE--------------------MGKSASS------------ 386
           A++  Y+  G +  A++ + +                    +G +  +            
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           ++W A I G+ +N + +EA+E F  M+      +  T +++L AC+ L  L   +QIH +
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARK 505
            ++S  E +V V +++I  Y + GS   A RVF Q+    + ++W SMI A +Q+G   +
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A++LFE+MV  G++P + T++ VLSAC+H+G V  G++ +E M  E+GI+P+ +HY+CMV
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DL  RAG L  A  FI  +P+ P   +W  L AACR   +  +AE  + ++L +DP ++ 
Sbjct: 760 DLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSG 819

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            Y  L+N+Y+  G   DA    KL K K + KE G SW  V  K++ F + +  H +   
Sbjct: 820 AYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDS 879

Query: 686 VYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFE 734
           +Y K  ++ ++I+  G             D  KE+ +  HSE+LA+ FGLIS P K    
Sbjct: 880 IYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLR 939

Query: 735 CSRTLE 740
             + L 
Sbjct: 940 IMKNLR 945



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 222/515 (43%), Gaps = 72/515 (13%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E     QF +  VLS C+  E   +GR+ H  + K  +     V  S++ MY KCGD ++
Sbjct: 341 EGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAET 400

Query: 171 MVAVVKQMPY-------------------------------LDIASCNCLLAGYAKNALF 199
             AV ++M                                   I S N ++AGY +N L 
Sbjct: 401 ARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLD 460

Query: 200 DQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             A  FF + L    ++P+ +T +++L+ C +L  +  GKQ+H+  ++      + + NA
Sbjct: 461 GMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNA 520

Query: 259 LLTMYIKCGMMEDAESV-----------------FEGLVQ----------------RNVI 285
           L++ Y K G +E A  +                  EG V+                R+VI
Sbjct: 521 LISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVI 580

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           +WTA+I G+ Q+G  ++ + L   M   G +PN +T    L++CASL     G   H + 
Sbjct: 581 AWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKA 640

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+        V  AI+ +Y+  G +  A++   ++     +++W + I    ++   E+A
Sbjct: 641 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQA 700

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIE 464
           +  F +MVR     D  TY  +L AC+    +   ++ + ++         +   + +++
Sbjct: 701 VVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVD 760

Query: 465 AYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
            + + G   +A     ++  A D V W S++ A      A  A +   K++   I P NS
Sbjct: 761 LHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLL--SIDPHNS 818

Query: 524 -TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
             + A+ +  S  G   D  ++++ + K+ G+  E
Sbjct: 819 GAYSALANVYSACGRWNDAARIWK-LRKDKGVKKE 852


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 198/656 (30%), Positives = 346/656 (52%), Gaps = 49/656 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + VL  CS    L  GR  H  +  + +   Q +  +LV MYA+ G +     + 
Sbjct: 109 DHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMF 165

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D  S N ++  ++++  +  A   F ++   DV+PN  TY  +++   +   + 
Sbjct: 166 QSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLP 224

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG+++HA+ +   + +   V+ AL+ MY KCG   +A  VF+ + +R+++SW  +I  + 
Sbjct: 225 EGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYV 284

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +GD+ + L L   +  +G    + TF   L +C+S++    G + H+ +++RG+     
Sbjct: 285 LNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVA 344

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEM--------------------GKSA----------- 384
           V TA+V+MY+  G + EA+K    M                    GK A           
Sbjct: 345 VATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLG 404

Query: 385 --SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCE 441
              ++SWNA I  + +N     A++ F +M        D  T+ ++L+AC+ L  L+  +
Sbjct: 405 SRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVK 464

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            +H++I +S+ ESNV V ++LI  Y +CGS E+AER+F+      VVSW +M+ A+SQ G
Sbjct: 465 ALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYG 524

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           R  +A+ LF++M +EG++P + T+ ++L  C+H G ++ G + F  M + + + P   H+
Sbjct: 525 RYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHF 584

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           + MVDLLGR+G+L  A   + ++P +P    W     ACR H  L++ E  ++++ ELDP
Sbjct: 585 AAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDP 644

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
              A Y+ +SN+YA  G+       RK M+ + + K PG S+IEV  K++ F S  K H 
Sbjct: 645 SSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHP 704

Query: 682 EMPKVYEKLKQLMQQIEDIGH-----------TDNEKEDRVLYHSERLAVGFGLIS 726
              ++ E+L +L   +   G+           ++ EKE  +LYHSE++A+ FGL+S
Sbjct: 705 RTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVS 760



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/594 (27%), Positives = 279/594 (46%), Gaps = 56/594 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + VL  CS    +  GR  H  I  +    D  V  +L++MY KC  +    +V 
Sbjct: 6   DNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVF 65

Query: 176 KQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           + M +   ++ S N ++A YA+N    +A   + +++   +  +H T+ ++L  C SL+ 
Sbjct: 66  ESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA- 124

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
             +G+++H +       S  +++NAL+TMY + G + DA+ +F+ L  R+  SW A+I  
Sbjct: 125 --QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILA 182

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q GD+   LR+   M+ D + PN  T+   ++  ++      G   HA+++  G    
Sbjct: 183 HSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTD 241

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V TA+++MY   G   EA++   +M K    VSWN  I  +  N    EA+E + ++ 
Sbjct: 242 LVVATALINMYGKCGSSHEAREVFDKM-KKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                  + T+ SIL ACS + +LA    +HS I++   +S V V ++L+  Y KCGS E
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           +A +VF+ +   D V+W+++I AY+ NG    ARKA  +F+++   G R T S + A+++
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL---GSRDTIS-WNAMIT 416

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
               +G      K+F  M    G+ P+                   A+ FI+ L      
Sbjct: 417 TYVQNGCAVAAMKIFREMTGAAGLKPD-------------------AVTFIAVLE----- 452

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV-TLSNMYAEAGLQADAEEQRKL 649
                   AC     L   + +  QI E + +   V   TL NMYA  G   +AE     
Sbjct: 453 --------ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAA 504

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            K K +      SW  +       FSQ   ++E   +++++     + +D+ +T
Sbjct: 505 AKEKTV-----VSWTAMVAA----FSQYGRYAEALDLFQEMDLEGVKPDDVTYT 549



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 230/481 (47%), Gaps = 49/481 (10%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           +D QP++ T+ T+L  C S   + EG+ LH +    ++   T V NAL++MY KC  + D
Sbjct: 1   MDRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVD 60

Query: 272 AESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           A SVFE +   QRNV+SW A+I  + Q+G   + L L   M   G+  +  TF   L +C
Sbjct: 61  ARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC 120

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           +SL     G   H +V   G+     +  A+V MY+  G + +AK+  + + ++    SW
Sbjct: 121 SSLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSL-QTRDETSW 176

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA I    ++     A+  F +M + D   +  TY +++   S    L    +IH+ IV 
Sbjct: 177 NAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVA 235

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           + F++++ V ++LI  Y KCGS  +A  VF ++   D+VSWN MI  Y  NG   +A+ L
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALEL 295

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           ++K+ +EG + T +TF+++L ACS    +  G+ V  S + E G+  E A  + +V++  
Sbjct: 296 YQKLDMEGFKRTKATFVSILGACSSVKALAQGRLV-HSHILERGLDSEVAVATALVNMYA 354

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           + G LE A                R +F A                   +   DA  + T
Sbjct: 355 KCGSLEEA----------------RKVFNA-------------------MKNRDAVAWST 379

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           L   YA  G   DA + RK+     +      SW    N +   + QN       K++ +
Sbjct: 380 LIGAYASNGYGKDARKARKV--FDRLGSRDTISW----NAMITTYVQNGCAVAAMKIFRE 433

Query: 690 L 690
           +
Sbjct: 434 M 434


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 180/521 (34%), Positives = 306/521 (58%), Gaps = 23/521 (4%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-----VSNALLTMYIKCGMMEDAES 274
           + + ++ +C      D G+ +H        L         VSN+L +MY K G+++DA  
Sbjct: 66  SLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALR 125

Query: 275 VFEGLVQRNVISWTAIINGFKQ-HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +F+G+  RNV++WT ++       G  ++ LR +  MR DG+ PN YTF+  L +C +  
Sbjct: 126 MFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTT-- 183

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
              M    HA  +K G+    FV ++++D Y  LG++   ++   EM  +   V WN+ I
Sbjct: 184 -PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEM-VTRDLVVWNSII 241

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AGF ++     AIE F +M     + ++ T +S+L+AC+ +  L    Q+H+ ++K  ++
Sbjct: 242 AGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YD 299

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            ++ + ++L++ Y KCGS EDA+ +F ++   DV+SW++M+   +QNG++ +A+ +F+ M
Sbjct: 300 RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLM 359

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
             +G+ P + T + VL ACSH+GLV+DG   F SM + +GI PE  H++CMVDLLGRAGK
Sbjct: 360 KSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGK 419

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L+ A+ FI  + ++P + IWR L  ACR H +  +A + +++IL+L+PDD    V LSN 
Sbjct: 420 LDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNT 479

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           YA+     DAE+  K M+ + + KEPG SWIE+  +++ F + + SH     + ++L +L
Sbjct: 480 YADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQELNRL 539

Query: 694 MQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFG 723
           + +I+ +G+              +KED + YHSE++A+ FG
Sbjct: 540 IGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFG 580



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 18/326 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAV-----CGDQFVTASLVNMYAKCGDIKS 170
           D   +  ++  C R    + GR  H  +           G  FV+ SL +MYAK G +  
Sbjct: 63  DPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDD 122

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAK-NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC- 228
            + +   MP  ++ +   ++A  A  +    +A  F + +    V PN YT+S++L  C 
Sbjct: 123 ALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACT 182

Query: 229 --GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
             G L+A+      HA T+K    S   V ++L+  Y+K G ++    VF+ +V R+++ 
Sbjct: 183 TPGMLTAV------HASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVV 236

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W +II GF Q GD    + L   M++ G   N+ T T  L +C  +     G   HA V+
Sbjct: 237 WNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVL 296

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K    L   +  A++DMY   G + +A      M +    +SW+  ++G  +N K+ EA+
Sbjct: 297 KYDRDL--ILHNALLDMYCKCGSLEDADALFHRMPQR-DVISWSTMVSGLAQNGKSVEAL 353

Query: 407 EAFSQMVRNDAACDEFTYSSILKACS 432
             F  M     A +  T   +L ACS
Sbjct: 354 RVFDLMKSQGVAPNHVTMVGVLFACS 379



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 152/345 (44%), Gaps = 41/345 (11%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA   K  +  D FV +SL++ Y K GD+     V  +M   D+   N ++AG+A++   
Sbjct: 191 HASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDG 250

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             A   F+++       N  T +++L  C  +  ++ G+Q+HA  +K  Y     + NAL
Sbjct: 251 VGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNAL 308

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG +EDA+++F  + QR+VISW+ +++G  Q+G   + LR+  LM+  G+ PN 
Sbjct: 309 LDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNH 368

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T    L +C+           HA +++ G                     W   + +K 
Sbjct: 369 VTMVGVLFACS-----------HAGLVEDG---------------------WHYFRSMKR 396

Query: 380 M-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           + G        N  +    R  K +EA+E    M       D   + ++L AC +  + +
Sbjct: 397 LFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGM---SLEPDSVIWRTLLGACRMHKNAS 453

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLI-EAYNKCGSWEDAERVFSQL 482
                   I+  K E +      L+   Y     W DAE+ +  +
Sbjct: 454 LAAYAAREIL--KLEPDDQGARVLLSNTYADLRQWTDAEKPWKAM 496


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/552 (36%), Positives = 308/552 (55%), Gaps = 11/552 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     VLS CS E  L+ GR  H L+ KT       V  +L+ MY   G +     V 
Sbjct: 184 DKYTFASVLSLCSLE-LLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVF 242

Query: 176 KQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           ++      D  + N ++ G A     ++A   F ++    ++P   T+ ++++ C S   
Sbjct: 243 EEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARV 302

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
                Q+HAQ +K+ + + T VSNA +TMY  CG +     VF+ L ++++ISW  II  
Sbjct: 303 ---SHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMN 359

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q   Y   +     M+  GI+P+E+T    LAS  SL    +  MF A V K G+   
Sbjct: 360 YAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLE---IVKMFQALVSKNGLNSK 416

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V  A+V  +S  G+I +A +    M  S + +SWN  I+GF  N  T + +E F +++
Sbjct: 417 IEVSNALVSAFSKHGQIEQAYQVFNNM-SSPNLISWNTIISGFLFNGFTLQGLEQFYELL 475

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +    + +T S +L  C+ + +L   +QIH  I++S   S   +G++LI  Y KCG  +
Sbjct: 476 MSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLD 535

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSAC 532
            + R+F+ +   D+VSWN+MI AY+Q+G+ ++A+  F+ M   G ++P  +TF AVLSAC
Sbjct: 536 WSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSAC 595

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GLV DG ++F SMV +YG  P   H SC+VDLLGRAG LE A   I++  +K  + I
Sbjct: 596 SHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSI 655

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  LF+AC  H +L++   ++  +LE++ +D AVYV LSN+YA AG   +A   R LM+ 
Sbjct: 656 WWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQK 715

Query: 653 KEISKEPGCSWI 664
             ++K+PGCSWI
Sbjct: 716 TRVAKQPGCSWI 727



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 247/515 (47%), Gaps = 17/515 (3%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D +   +L++   K G I     +  Q P +     N ++ G A+N   + A + F ++ 
Sbjct: 118 DVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMH 177

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            + V+ + YT++++L++C SL  +D G+++H   +K  +L + +V NALLTMY   G + 
Sbjct: 178 QLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVA 236

Query: 271 DAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           DA  VFE       + I++  +I G    G  E+ L +   M+E  + P E TF   ++S
Sbjct: 237 DAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSS 296

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C+S R SH     HAQ IK G      V  A + MYS  G +  A   + +  +    +S
Sbjct: 297 CSSARVSH---QVHAQAIKMGFEACTPVSNAAMTMYSSCGNL-HAVHMVFDRLEEKDLIS 352

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN  I  + +      AI AF QM R     DEFT  S+L +     SL   +   + + 
Sbjct: 353 WNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASS---ESLEIVKMFQALVS 409

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K+   S + V ++L+ A++K G  E A +VF+ +++ +++SWN++I  +  NG   + + 
Sbjct: 410 KNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLE 469

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            F ++++  ++P   T   VLS C+    ++ G+++   +++  G+    +  + ++ + 
Sbjct: 470 QFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRS-GVFSVTSLGNALITMY 528

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE---LDPDDAA 625
            + G L+ +L   + +  +     W  + +A   H   K A    K + +   + PD A 
Sbjct: 529 AKCGDLDWSLRIFNVMNGRDIVS-WNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQAT 587

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
               LS   + AGL  D       M + +   EPG
Sbjct: 588 FTAVLSAC-SHAGLVDDGTRIFNSM-VNDYGFEPG 620



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 200/446 (44%), Gaps = 42/446 (9%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
           N LLA   ++     +   F+++   + ++P+H+T S+ L  C +L     G QLHA ++
Sbjct: 21  NQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSI 80

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT----------------- 288
           +    + T V N LL+ Y K   +   + VF  +   +V SWT                 
Sbjct: 81  QTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACH 140

Query: 289 --------------AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
                         AII G  ++   E  L L   M + G+  ++YTF   L+ C SL  
Sbjct: 141 LFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLEL 199

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA-SSVSWNAQI 393
              G   H  VIK G  +   V  A++ MY   G++ +A +  +E   +    +++N  I
Sbjct: 200 LDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMI 259

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G     + EEA+  F +M        E T+ S++ +CS   S     Q+H++ +K  FE
Sbjct: 260 GGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFE 316

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           +   V ++ +  Y+ CG+      VF +L   D++SWN +I  Y+Q    R AI+ F +M
Sbjct: 317 ACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQM 376

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
              GI P   T  ++L++     +V    K+F+++V + G+  +    + +V    + G+
Sbjct: 377 QRAGIEPDEFTIGSLLASSESLEIV----KMFQALVSKNGLNSKIEVSNALVSAFSKHGQ 432

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAA 599
           +E A    +N+   P    W  + + 
Sbjct: 433 IEQAYQVFNNMS-SPNLISWNTIISG 457


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 179/533 (33%), Positives = 299/533 (56%), Gaps = 13/533 (2%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA  +K +Y     ++  L+ +Y++CG ++DA +V +G
Sbjct: 42  HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +RNV+SWTA+I+G+ Q G + + L L   M   G   NE+T    L SC   ++    
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H+ V+K       FVG++++DMY   G I EA+K   +M     +VS  A I+G+ +
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVF-DMLPERDTVSCTAIISGYAQ 220

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               +EA++ F Q+  +   C+  T++++L + S L SL   +Q+H  I++ +    + +
Sbjct: 221 LGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVL 280

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SLI+ Y+KCG    + RVF  +     +SWN+M+  Y ++G  ++ + LF  M  E +
Sbjct: 281 QNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEV 339

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P + T LAVLS CSH GLV +G  +F+ +VKE   +    HY C++DLLGR+G+L+ AL
Sbjct: 340 KPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKAL 399

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I ++P +PT  IW  L  ACR H ++ + E +++++L+++P +A  YV LSN+YA AG
Sbjct: 400 DLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAG 459

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           +  D    RKLM    ++KEP  SWI +   I+ F S  + H     +  K+K++   ++
Sbjct: 460 MWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVK 519

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             G             D +KE  +L HSE+LA+ FGL++ P     +  + L 
Sbjct: 520 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLR 572



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 216/503 (42%), Gaps = 75/503 (14%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C   + ++   + H+L+ KT      FV +SL++MY K G+I+    V   +P  D
Sbjct: 148 VLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERD 207

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             SC  +++GYA+  L D+A   F +L    +Q N+ T++T+L     L++++ GKQ+H 
Sbjct: 208 TVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHG 267

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +      + N+L+ MY KCG +  +  VF+ + QR+ ISW A++ G+ +HG  ++
Sbjct: 268 LILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQE 327

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            ++L   M E+ + P+  T    L+ C+           H  ++  G+ + D +      
Sbjct: 328 VVQLFRTMTEE-VKPDSVTLLAVLSGCS-----------HGGLVDEGLDIFDLI------ 369

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                         +KE         +   I    R+ + ++A++    M          
Sbjct: 370 --------------VKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPA--- 412

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF--- 479
            + S+L AC +  +++  E +  +++  +   N      L   Y   G W+D  RV    
Sbjct: 413 IWGSLLGACRVHINVSVGEVVAQKLLDME-PGNAGNYVILSNIYAAAGMWKDVFRVRKLM 471

Query: 480 --SQLTAADVVSW---NSMIKAYSQNGR---ARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             + +T     SW   + +I  +  + R    +K I    K V   ++     F+  LS 
Sbjct: 472 LENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAG--FVPDLSC 529

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
             H   V D QK  E M                  LLG + KL I    + N P   T  
Sbjct: 530 VLHD--VDDEQK--ERM------------------LLGHSEKLAITFGLM-NTPPGLTIQ 566

Query: 592 IWRPLFAACRCHSDLKMAEFISK 614
           + + L     CH+    A+F+SK
Sbjct: 567 VMKNLRICVDCHN---FAKFVSK 586


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 180/517 (34%), Positives = 298/517 (57%), Gaps = 11/517 (2%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +++ C  L +I   K++    +         + N +L M++KCGMM DA  +F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            ++N++SW  II G    GDY +  RL  +M +   D     F   + + A L     G 
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGR 252

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H+  +K G+    FV  A++DMYS  G I +A+    +M +  ++V WN+ IAG+  +
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEK-TTVGWNSIIAGYALH 311

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
             +EEA+  + +M  +    D FT+S I++ C+ L SL   +Q H+ +V+  F  ++   
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L++ Y+K G  EDA+ VF  +   +V+SWN++I  Y  +GR  +A+ +FE+M+ EG+ 
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMV 431

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P + TFLAVLSACS+SGL   G ++FESM +++ I P   HY+CM++LLGR G L+ A  
Sbjct: 432 PNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 491

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
            I + P KPT  +W  L  ACR H + ++ +F ++++  + P+  + YV L N+Y  +G 
Sbjct: 492 LIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVVLLNIYNXSGR 551

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             +A    + +K + +   P CSWIE+  + Y F S +K H++  ++Y+KL +LM +I  
Sbjct: 552 LEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISK 611

Query: 700 IGHTD---------NEKEDRV-LYHSERLAVGFGLIS 726
            G+           +E+E+RV LYHSE+LA+ FGLI+
Sbjct: 612 HGYVPQXKFLLPDVDEQEERVLLYHSEKLAIAFGLIN 648



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 201/435 (46%), Gaps = 38/435 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+++   ++ M+ KCG +     +  +MP  +I S N ++ G      + +AF  FL + 
Sbjct: 165 DEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMW 224

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                     + TM+     L  I  G+QLH+ ++K        V+ AL+ MY KCG +E
Sbjct: 225 QXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIE 284

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA+ VF+ + ++  + W +II G+  HG  E+ L +   MR+ G+  + +TF++ +  CA
Sbjct: 285 DAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICA 344

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L +       HA +++ G  L     TA+VD+YS  G I E  K + +M    + +SWN
Sbjct: 345 RLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRI-EDAKHVFDMMPHKNVISWN 403

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A IAG+  + +  EA+E F +M+      +  T+ ++L ACS                  
Sbjct: 404 ALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACS------------------ 445

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            +      G  + E+ ++                   + +  MI+   + G   +A  L 
Sbjct: 446 -YSGLSDRGWEIFESMSR-----------DHKIKPRAMHYACMIELLGREGLLDEAFALI 493

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLG 569
           +       +PT + + A+L+AC      + G+   E +   YG+ PE+ ++Y  ++++  
Sbjct: 494 KD---APFKPTVNMWAALLTACRVHKNFELGKFAAEKL---YGMGPEKLSNYVVLLNIYN 547

Query: 570 RAGKLEIALIFISNL 584
            +G+LE A   I  L
Sbjct: 548 XSGRLEEAAAVIQTL 562



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 113/195 (57%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ H+   KT V GD FV  +L++MY+KCG I+    V  QMP       N ++AGYA 
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYAL 310

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   ++A S + ++    V+ +++T+S ++ IC  L++++  KQ HA  ++  +      
Sbjct: 311 HGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVA 370

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           + AL+ +Y K G +EDA+ VF+ +  +NVISW A+I G+  HG   + + +   M  +G+
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430

Query: 316 DPNEYTFTVALASCA 330
            PN  TF   L++C+
Sbjct: 431 VPNHVTFLAVLSACS 445



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 5/234 (2%)

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKA 430
           EA+    ++ K +S +    +   FF+  +  EA+E F  +  N A   D  TY +++ A
Sbjct: 83  EAQVNETQLRKPSSELCGQIEKLVFFK--RYHEALELFEILELNGAYDMDSETYDALVSA 140

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C  L S+   +++ + ++ S  + + ++ + ++  + KCG   DA R+F ++   +++SW
Sbjct: 141 CIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSW 200

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N++I      G   +A  LF  M        +  F+ ++ A +  GL+  G+++    +K
Sbjct: 201 NTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLK 260

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
             G+  +      ++D+  + G +E A      +P K T   W  + A    H 
Sbjct: 261 T-GVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVG-WNSIIAGYALHG 312



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C+R   LE  ++ HA + +     D     +LV++Y+K G I+    V   MP+ +
Sbjct: 339 IIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKN 398

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AGY  +    +A   F ++    + PNH T+  +L+ C      D G ++  
Sbjct: 399 VISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFE 458

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIINGFKQHGDY 300
              +   +   A+  A ++ +  + G++++A ++  +   +  V  W A++   + H ++
Sbjct: 459 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNF 518

Query: 301 E 301
           E
Sbjct: 519 E 519


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 194/612 (31%), Positives = 328/612 (53%), Gaps = 13/612 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  +  + +  + F+   LVN  +  G I     +  +  Y D+   N ++  Y++N ++
Sbjct: 76  HNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMY 135

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
                 +  +    V P+ +T+  +L  C  L        +H Q +K  + S   V N L
Sbjct: 136 RDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGL 195

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + +Y KCG +  A+ VF+GL  R ++SWT+II+G+ Q+G   + LR+   MR +G+ P+ 
Sbjct: 196 VALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDW 255

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
                 L +   + +   G   H  VIK G+     +  ++   Y+  G +  AK    +
Sbjct: 256 IALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQ 315

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M K+ + + WNA I+G+ +N   EEA+  F  M+  +   D  T  S + A + + SL  
Sbjct: 316 M-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLEL 374

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            + +   + KS + S++ V +SLI+ Y KCGS E A RVF + +  DVV W++MI  Y  
Sbjct: 375 AQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGL 434

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G+  +AI L+  M   G+ P + TF+ +L+AC+HSGLV++G ++F  M K++ I+P   
Sbjct: 435 HGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRNE 493

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HYSC+VDLLGRAG L  A  FI  +PI+P   +W  L +AC+ +  + + E+ + ++  L
Sbjct: 494 HYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSL 553

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           DP +   YV LSN+YA + L       R LM+ K ++K+ G S IE+  K+  F   +KS
Sbjct: 554 DPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKS 613

Query: 680 HSEMPKVYEKLKQLMQQIEDIG---------HTDN--EKEDRVLYHSERLAVGFGLISLP 728
           H    +++++L++L ++++++G         H  N  EKE+ + +HSER+AV +GLIS  
Sbjct: 614 HPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTA 673

Query: 729 AKNKFECSRTLE 740
                  ++ L 
Sbjct: 674 PGTTLRITKNLR 685



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 16/333 (4%)

Query: 123 VLSYCSREECLELGRR--YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           VL  C+  E L+ G     H  I K     D FV   LV +YAKCG I     V   + +
Sbjct: 160 VLKACT--ELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYH 217

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             I S   +++GYA+N    +A   F ++    V+P+     ++L     +  +++G+ +
Sbjct: 218 RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSI 277

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K+    + A+  +L   Y KCG++  A+S F+ +   NVI W A+I+G+ ++G  
Sbjct: 278 HGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHA 337

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+ + L   M    I P+  T   A+ + A + +  +       V K       FV T++
Sbjct: 338 EEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSL 397

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+  G + E  +++ +       V W+A I G+  + +  EAI  +  M +     +
Sbjct: 398 IDMYAKCGSV-EFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPN 456

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           + T+  +L AC+           HS +VK  +E
Sbjct: 457 DVTFIGLLTACN-----------HSGLVKEGWE 478



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 114/233 (48%), Gaps = 11/233 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L   +  + LE GR  H  + K  +  +  +  SL   YAKCG +    +   QM 
Sbjct: 258 LVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMK 317

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++   N +++GYAKN   ++A + F  +   +++P+  T  + +     + +++  + 
Sbjct: 318 TTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQW 377

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +     K  Y S   V+ +L+ MY KCG +E A  VF+    ++V+ W+A+I G+  HG 
Sbjct: 378 MDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQ 437

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
             + + L  +M++ G+ PN+ TF   L +C            H+ ++K G  L
Sbjct: 438 GWEAINLYHVMKQAGVFPNDVTFIGLLTACN-----------HSGLVKEGWEL 479



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 44/254 (17%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +QIH+R+V S  + N  + + L+   +  G    A ++F +    DV  WN++I++YS+N
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK-VFESMVKEYGILPEEA 559
              R  + ++  M   G+ P   TF  VL AC+   L+  G   +    + +YG   +  
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE--LLDFGLSCIIHGQIIKYGFGSDVF 190

Query: 560 HYSCMVDLLGRAGKLEI-------------------------------ALIFISNLPIKP 588
             + +V L  + G + +                               AL   S +    
Sbjct: 191 VQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNG 250

Query: 589 TAPIWRPLFAACRCHSDLKMAE-------FISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             P W  L +  R ++D+   E       F+ K  LE   D+ A+ ++L+  YA+ GL  
Sbjct: 251 VKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLE---DEPALLISLTAFYAKCGLVT 307

Query: 642 DAEEQRKLMKMKEI 655
            A+     MK   +
Sbjct: 308 VAKSFFDQMKTTNV 321



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/164 (21%), Positives = 74/164 (45%), Gaps = 1/164 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LEL +     ++K+    D FV  SL++MYAKCG ++    V  +    D+   + ++ G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y  +    +A + +  +    V PN  T+  +L  C     + EG +L       + + +
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPR 491

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFK 295
               + ++ +  + G + +A +    + ++  V  W A+++  K
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACK 535


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 207/655 (31%), Positives = 357/655 (54%), Gaps = 55/655 (8%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++L  C   + L  G+  H +  K+ +    +++   + +Y+KC  + +      Q    
Sbjct: 13  QILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEP 72

Query: 182 DIASCNCLLAGYAKNAL-------FDQ------------------------AFSFFLKLD 210
           ++ S N L+A YAK +L       FDQ                        A S F ++ 
Sbjct: 73  NVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMR 132

Query: 211 GIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
            + +  + +T+S ++ A C  +  I   +QLH+      + S  +V N+LLT Y K G++
Sbjct: 133 EMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGIL 189

Query: 270 EDAESVFEGLVQ--RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
           E+AE VF G+ +  R+ +SW ++I  + QH    K L L   M   G + + +T    L 
Sbjct: 190 EEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLT 249

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-IWEAKKQLKEMGKSASS 386
           + + + +   G  FHA+ IK G      VG+ ++DMY+  G  + E++K  +E+  S   
Sbjct: 250 TFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS-DL 308

Query: 387 VSWNAQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           V WN  I+G+ +N++ + EA+E F QM R     D+ ++   + ACS L S +  +Q H+
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHA 368

Query: 446 RIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +KS+  SN + V ++L+  Y+KCG+ +DA ++F ++   + V+ NS+I  Y+Q+G   
Sbjct: 369 LAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +++ LFE+M+   I PT+ T +++LSAC+H+G V++G+K F  M   +GI PE  HYSCM
Sbjct: 429 ESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCM 488

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           +DLLGRAGKL  A   I  +P  P +  W  L  ACR + ++++AE  + Q L+L+P +A
Sbjct: 489 IDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNA 548

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             Y+ L++MY+ A    +A   RKLM+ + I K+PGCSWIE+  +++ F +++ SH  + 
Sbjct: 549 VPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIK 608

Query: 685 KVYEKLKQLMQQIEDIGHT--------------DNEKEDRVLYHSERLAVGFGLI 725
           +++  L ++  +++  G+               + EKE  + +HSE+LAV FGL+
Sbjct: 609 EIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLL 663



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 189/410 (46%), Gaps = 42/410 (10%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF--- 276
           ++  +L  C +   +  GK LH   +K    S T +SN  + +Y KC ++  A   F   
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 277 -----------------EGLV-----------QRNVISWTAIINGFKQHGDYEKPLRLVC 308
                            E L+           Q +++S+  +IN +   GD    L L  
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGTAIVDMYSG 366
            MRE G+  + +TF+  + +C     +H+G +   H+     G      V  +++  YS 
Sbjct: 130 EMREMGLVMDGFTFSGVITACC----NHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSK 185

Query: 367 LGEIWEAKKQLKEMGKSA-SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            G + EA+     MG+     VSWN+ I  + ++++  +A+  +  MV      D FT +
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLA 245

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS-WEDAERVFSQLTA 484
           S+L   S +  L+   Q H++ +K+ F  N HVGS LI+ Y KCG+   ++ +VF ++  
Sbjct: 246 SVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICG 305

Query: 485 ADVVSWNSMIKAYSQNGR-ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           +D+V WN+MI  YSQN   + +A+  F +M   G  P + +F+  +SACS+      G++
Sbjct: 306 SDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQ 365

Query: 544 VFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
            F ++  +  I   +    + +V +  + G L+ A      +P   T  +
Sbjct: 366 -FHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTL 414



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 155/311 (49%), Gaps = 18/311 (5%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVA 173
           +D   +  VL+  S  E L  G ++HA   KT    ++ V + L++MYAKCG  +     
Sbjct: 239 IDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRK 298

Query: 174 VVKQMPYLDIASCNCLLAGYAKNA-LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
           V +++   D+   N +++GY++N  L  +A   F ++      P+  ++   ++ C +LS
Sbjct: 299 VFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLS 358

Query: 233 AIDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           +  +GKQ HA  MK +  S + +V+NAL+TMY KCG ++DA  +F+ + Q N ++  +II
Sbjct: 359 SPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSII 418

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+ QHG   + L L   M    I P   T    L++CA     H G +   +  K    
Sbjct: 419 AGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACA-----HTGRVEEGK--KYFNM 471

Query: 352 LGDFVG--------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           + D  G        + ++D+    G++ EA++ +  M  S  S +W A +    +    E
Sbjct: 472 MKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNME 531

Query: 404 EAIEAFSQMVR 414
            A +A +Q ++
Sbjct: 532 LAEKAANQFLQ 542


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 193/551 (35%), Positives = 311/551 (56%), Gaps = 9/551 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +GR+ HAL+ K +  GD +V  SLV MY K G ++  + V   MP  +  + + +++GYA
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195

Query: 195 KNALFDQA---FSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
                ++A   F+ FL  K +G D   + Y ++ +L+   +   +  G+Q+H  T+K   
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSD---SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           L   A+SNAL+TMY KC  + +A  +F+    RN I+W+A++ G+ Q+G+  + ++L   
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   GI P+EYT    L +C+ +     G   H+ ++K G     F  TA+VDMY+  G 
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A+K    + +   ++ W + I+G+ +N   EEA+  + +M       ++ T +S+LK
Sbjct: 373 LADARKGFDCLQERDVAL-WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS L +L   +Q+H   +K  F   V +GS+L   Y+KCGS ED   VF +    DVVS
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+MI   S NG+  +A+ LFE+M+ EG+ P + TF+ ++SACSH G V+ G   F  M 
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            + G+ P+  HY+CMVDLL RAG+L+ A  FI +  I     +WR L +AC+ H   ++ 
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
            +  ++++ L   +++ YV LS +Y   G   D E   K M+   +SKE GCSWIE+ N+
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671

Query: 670 IYRFFSQNKSH 680
            + F   +  H
Sbjct: 672 YHVFVVGDTMH 682



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 252/512 (49%), Gaps = 12/512 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++ L++ S++  L  GR  H  I +T           LVN YAKCG +    ++   + 
Sbjct: 17  LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76

Query: 180 YLDIASCNCLLAGYAKNALFDQAFS---FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
             D+ S N L+ GY++N     +++    F ++   D+ PN YT + +     SL +   
Sbjct: 77  CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+Q HA  +K+       V  +L+ MY K G++ED   VF  + +RN  +W+ +++G+  
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196

Query: 297 HGDYEKPLRLVCLM---REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
            G  E+ +++  L    +E+G D ++Y FT  L+S A+     +G   H   IK G+   
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +  A+V MYS    + EA K     G   +S++W+A + G+ +N ++ EA++ FS+M 
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTGYSQNGESLEAVKLFSRMF 314

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                  E+T   +L ACS +  L   +Q+HS ++K  FE ++   ++L++ Y K G   
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA + F  L   DV  W S+I  Y QN    +A+IL+ +M   GI P + T  +VL ACS
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
               ++ G++V    +K +G   E    S +  +  + G LE   +     P K     W
Sbjct: 435 SLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS-W 492

Query: 594 RPLFAACRCHSDLKMAEFISKQILE--LDPDD 623
             + +    +     A  + +++L   ++PDD
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 214/447 (47%), Gaps = 27/447 (6%)

Query: 116 DKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           D  +V   VLS  +    + LGR+ H +  K  + G   ++ +LV MY+KC  +     +
Sbjct: 219 DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
                  +  + + ++ GY++N    +A   F ++    ++P+ YT   +L  C  +  +
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           +EGKQLH+  +KL +      + AL+ MY K G + DA   F+ L +R+V  WT++I+G+
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+ D E+ L L   M+  GI PN+ T    L +C+SL    +G   H   IK G  L  
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +G+A+  MYS  G + +     +    +   VSWNA I+G   N + +EA+E F +M+ 
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRT-PNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------------ESNVHVGSSL 462
                D+ T+ +I+ ACS           H   V+  +            +  V   + +
Sbjct: 518 EGMEPDDVTFVNIISACS-----------HKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566

Query: 463 IEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           ++  ++ G  ++A E + S      +  W  ++ A   +G+    +   EK++  G R +
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESM 548
            ST++ +    +  G ++D ++V++ M
Sbjct: 627 -STYVQLSGIYTALGRMRDVERVWKHM 652



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 180/417 (43%), Gaps = 51/417 (12%)

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           ++P+  T    L   +  RN   G   H Q+I+ G +        +V+ Y+  G++ +A 
Sbjct: 10  LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRN---QKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
                +      VSWN+ I G+ +N     +   ++ F +M   D   + +T + I KA 
Sbjct: 70  SIFNAI-ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S L S     Q H+ +VK     +++V +SL+  Y K G  ED  +VF+ +   +  +W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMV 549
           +M+  Y+  GR  +AI +F   + E    ++S   F AVLS+ + +  V  G+++    +
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248

Query: 550 KEYGILPEEA-------------------------------HYSCMVDLLGRAGK-LEIA 577
           K  G+L   A                                +S MV    + G+ LE  
Sbjct: 249 KN-GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307

Query: 578 LIF--ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT-LSNMY 634
            +F  + +  IKP+      +  AC     L+  + +   +L+L  +      T L +MY
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           A+AG  ADA +    ++ ++++         ++  +   + QN  + E   +Y ++K
Sbjct: 368 AKAGCLADARKGFDCLQERDVA---------LWTSLISGYVQNSDNEEALILYRRMK 415


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 309/560 (55%), Gaps = 5/560 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+  E    GR+ H  + KT +     V  +LV++Y KCG +K    V  ++ 
Sbjct: 112 IVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEIS 171

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             +  S N ++   A       A   F L +DG  V+PN  T+S+ML +   L   D GK
Sbjct: 172 ERNGVSWNAIITSLAYLERNQDALEMFRLMIDG-GVKPNSVTFSSMLPVLVELKLFDFGK 230

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H  +++    S   V+NAL+ MY K G    A +VF  + ++N++SW A++  F Q+ 
Sbjct: 231 EIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNR 290

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
                + LV  M+ DG  PN  TFT  L +CA +     G   HA+ I+ G ++  FV  
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSN 350

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+ DMY+  G +  A++  K   +    VS+N  I G+ +     E++  F +M      
Sbjct: 351 ALTDMYAKCGCLNLARRVFKISLR--DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMK 408

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  +Y  ++ AC+ L +L   +++H   V+    +++ + ++L++ Y KCG  + A +V
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F Q+ + D  SWNSMI  Y   G    AI LFE M  +G+   + +++AVLSACSH GLV
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLV 528

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+K FE M +   I P + HY+CMVDLLGRAG +E A+  I +LPI+P A +W  L  
Sbjct: 529 EEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLG 587

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H  +++A + ++ + +L P  +  Y  LSNMYAEAG   +A + RKLMK +   K 
Sbjct: 588 ACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKN 647

Query: 659 PGCSWIEVYNKIYRFFSQNK 678
           PGCSW+++ N+++ F +  +
Sbjct: 648 PGCSWVQIDNQVHAFVAGER 667



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 274/543 (50%), Gaps = 6/543 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      VL  C+    ++ GR  H ++ K     D FV  +L+  Y  CG +K +  V
Sbjct: 5   LDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRV 64

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSA 233
             +M   D+ S N ++  ++ +  + +A   F +++     +PN  +  ++L +C  L  
Sbjct: 65  FDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLED 124

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G+Q+H   +K    S+  V NAL+ +Y KCG ++D+  VF+ + +RN +SW AII  
Sbjct: 125 GVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITS 184

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
                  +  L +  LM + G+ PN  TF+  L     L+    G   H   ++ G+   
Sbjct: 185 LAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESD 244

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  A++DMY+  G   +A     ++G+  + VSWNA +A F +N+    A++   QM 
Sbjct: 245 IFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMVANFAQNRLELAAVDLVRQMQ 303

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +    +  T++++L AC+ +  L   ++IH+R +++    ++ V ++L + Y KCG   
Sbjct: 304 ADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLN 363

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A RVF +++  D VS+N +I  YSQ     +++ LF +M ++G++    +++ V+SAC+
Sbjct: 364 LARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACA 422

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           +   ++ G++V    V+++ +       + ++D   + G++++A      +P + TA  W
Sbjct: 423 NLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS-W 480

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
             +        +L +A  + + + E   + D+  Y+ + +  +  GL  + ++  + M++
Sbjct: 481 NSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQV 540

Query: 653 KEI 655
           + I
Sbjct: 541 QNI 543



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 178/340 (52%), Gaps = 2/340 (0%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           + V+ + +T+  +L  C    ++ +G+++H    KL + S   V N LL  Y  CG ++D
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASCA 330
            + VF+ +++R+V+SW ++I  F  HG Y + + L C M    G  PN  +    L  CA
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L +   G   H  V+K G+     VG A+VD+Y   G + ++++   E+ +  + VSWN
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISER-NGVSWN 179

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I      ++ ++A+E F  M+      +  T+SS+L     L      ++IH   ++ 
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             ES++ V ++LI+ Y K G    A  VF+Q+   ++VSWN+M+  ++QN     A+ L 
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +M  +G  P + TF  VL AC+  G ++ G+++    ++
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIR 339



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 133/261 (50%), Gaps = 3/261 (1%)

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+  +++TF   L +CA   +   G   H  V K G     FVG  ++  Y   G + + 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACS 432
           K+   EM +    VSWN+ I  F  +    EAI  F +M +R+    +  +  S+L  C+
Sbjct: 62  KRVFDEMLER-DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L    T  QIH  +VK+  +S V VG++L++ Y KCG  +D+ RVF +++  + VSWN+
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +I + +   R + A+ +F  M+  G++P + TF ++L       L   G+++       +
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI-HGFSLRF 239

Query: 553 GILPEEAHYSCMVDLLGRAGK 573
           G+  +    + ++D+  ++G+
Sbjct: 240 GLESDIFVANALIDMYAKSGR 260



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 7/191 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD    + V+S C+    L+ G+  H L  +  +    F+  +L++ Y KCG I     V
Sbjct: 409 LDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKV 468

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            +Q+P  D AS N ++ GY        A + F  +K DG  V+ +  +Y  +L+ C    
Sbjct: 469 FRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDG--VEYDSVSYIAVLSACSHGG 526

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAI 290
            ++EGK+ + + M++Q +  T +  A ++ +  + G++E+A  + E L ++ +   W A+
Sbjct: 527 LVEEGKK-YFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGAL 585

Query: 291 INGFKQHGDYE 301
           +   + HG  E
Sbjct: 586 LGACRIHGYIE 596


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 328/618 (53%), Gaps = 27/618 (4%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           RR   L TK A C            YA CG +     +  Q+   +    N ++ GYA N
Sbjct: 55  RRNTYLATKLAAC------------YAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACN 102

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +A   +LK+     +P+++TY  +L  CG L   + G+++HA  +         V 
Sbjct: 103 NSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVG 162

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N++L+MY K G +E A  VF+ ++ R++ SW  +++GF ++G+      +   MR DG  
Sbjct: 163 NSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV 222

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRG---MALGDFVGTAIVDMYSGLGEIWEA 373
            +  T    L++C  + +  +G   H  V++ G        F+  +I+DMY     +  A
Sbjct: 223 GDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCA 282

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +K  + + +    VSWN+ I+G+ +     +A+E F +MV   A  DE T  S+L AC+ 
Sbjct: 283 RKLFEGL-RVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQ 341

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           + +L     + S +VK  +  NV VG++LI  Y  CGS   A RVF ++   ++ +   M
Sbjct: 342 ISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVM 401

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +  +  +GR R+AI +F +M+ +G+ P    F AVLSACSHSGLV +G+++F  M ++Y 
Sbjct: 402 VTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYS 461

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           + P   HYSC+VDLLGRAG L+ A   I N+ +KP   +W  L +ACR H ++K+A   +
Sbjct: 462 VEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISA 521

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           +++ EL+PD  + YV LSN+YA      D E  R L+  + + K P  S++E+   +++F
Sbjct: 522 QKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQF 581

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGF 722
           F  + SH +   +Y KLK L +Q++  G+           + E ++++L+ HSERLA+ F
Sbjct: 582 FVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSERLALAF 641

Query: 723 GLISLPAKNKFECSRTLE 740
            LI+         ++ L 
Sbjct: 642 ALINTGPGTTIRITKNLR 659


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 193/576 (33%), Positives = 322/576 (55%), Gaps = 6/576 (1%)

Query: 124  LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
            L  CS+ E    GR+ H  + K  +  D +V+ SL++MY+KCG +     V   +    +
Sbjct: 778  LGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRL 837

Query: 184  ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
               N ++A Y +N     A   F  +    V P+ +T S +++ C      D GK +HA+
Sbjct: 838  EIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAE 897

Query: 244  TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
              K    S  A+ +ALLT+Y KCG   DA  VF+ + ++++++W ++I+G  ++G +++ 
Sbjct: 898  LFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 957

Query: 304  LRLVCLMRED--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
            L++   M++D   + P+    T  + +CA L     G   H  +IK G  L  FVG++++
Sbjct: 958  LKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLI 1017

Query: 362  DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            D+YS  G    A K    M +  + V+WN+ I+ + RN   E +IE F+ M+      D 
Sbjct: 1018 DLYSKCGLPEMALKVFTSM-RPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDS 1076

Query: 422  FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
             + +S+L A S   SL   + +H   ++    S+ H+ ++LI+ Y KCG  + AE +F +
Sbjct: 1077 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 1136

Query: 482  LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
            +    +++WN MI  Y  +G  R A+ LF+++   G  P + TFL+++SAC+HSG V++G
Sbjct: 1137 MQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEG 1196

Query: 542  QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            +  FE M ++YGI P+  HY+ MVDLLGRAG+LE A  FI  +P +  + IW  L +A R
Sbjct: 1197 KNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASR 1256

Query: 602  CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
             H ++++    ++++L ++P+  + YV L N+Y EAGL+ +A +    MK + + K+PGC
Sbjct: 1257 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGC 1316

Query: 662  SWIEVYNKIYRFFSQNKS---HSEMPKVYEKLKQLM 694
            SWIEV +    FFS   S    +E+ KV  +LK  M
Sbjct: 1317 SWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNM 1352



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/583 (25%), Positives = 276/583 (47%), Gaps = 39/583 (6%)

Query: 13   TSSFTFPYPV-----VEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLI 67
            TS FTFP  +     +  +   K  H   + +   +  + A  L N   K   L  +  +
Sbjct: 559  TSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 618

Query: 68   FNGYMNIEEKGISRNGYSTRNDSFPDGFIDD-----------GCSNTVPVTCYSLESLLD 116
            F+G+        S++G S R+ +  +  ID            GC   + V     ++   
Sbjct: 619  FDGW--------SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAF-S 669

Query: 117  KQFVIEVL---SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMV 172
               V+ VL       RE+    G++ H  + + ++ GD F+  +L++MY K G    +  
Sbjct: 670  LSIVVSVLCKEGNFRRED----GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWR 725

Query: 173  AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
              V+     ++   N ++ G+  + + + +   ++      V+    +++  L  C    
Sbjct: 726  VFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSE 785

Query: 233  AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
                G+Q+H   +K+   +   VS +LL+MY KCGM+ +AE+VF  +V + +  W A++ 
Sbjct: 786  NSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 845

Query: 293  GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
             + ++ +    L L   MR+  + P+ +T +  ++ C+       G   HA++ KR +  
Sbjct: 846  AYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQS 905

Query: 353  GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
               + +A++ +YS  G   +A    K M +    V+W + I+G  +N K +EA++ F  M
Sbjct: 906  TPAIESALLTLYSKCGCDTDAYLVFKSM-EEKDMVAWGSLISGLCKNGKFKEALKVFGDM 964

Query: 413  VRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
              +D +   D    +S++ AC+ L +L+   Q+H  ++K+    NV VGSSLI+ Y+KCG
Sbjct: 965  KDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCG 1024

Query: 471  SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
              E A +VF+ +   ++V+WNSMI  YS+N     +I LF  M+ +GI P + +  +VL 
Sbjct: 1025 LPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLV 1084

Query: 531  ACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAG 572
            A S +  +  G K         GI P + H  + ++D+  + G
Sbjct: 1085 AISSTASLLKG-KSLHGYTLRLGI-PSDTHLKNALIDMYVKCG 1125



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 8/380 (2%)

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGK 238
           Y+  AS N  +    +   + QA   + K DG   +  + +T+ ++L  C SL+ +  GK
Sbjct: 522 YISPASVNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGK 581

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-----RNVISWTAIING 293
            +H   + L +     ++ +L+ MY+KCG ++ A  VF+G  Q     R+V    ++I+G
Sbjct: 582 TIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDG 641

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM--GYMFHAQVIKRGMA 351
           + +   +++ +     M   G+ P+ ++ ++ ++      N     G   H  +++  + 
Sbjct: 642 YFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLD 701

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              F+ TA++DMY   G   +A +   E+   ++ V WN  I GF  ++  E ++E +  
Sbjct: 702 GDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYML 761

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
              N       +++  L ACS   + A   QIH  +VK   +++ +V +SL+  Y+KCG 
Sbjct: 762 AKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGM 821

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             +AE VFS +    +  WN+M+ AY +N     A+ LF  M  + + P + T   V+S 
Sbjct: 822 VGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISC 881

Query: 532 CSHSGLVQDGQKVFESMVKE 551
           CS  GL   G+ V   + K 
Sbjct: 882 CSMFGLYDYGKSVHAELFKR 901



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 155/305 (50%), Gaps = 11/305 (3%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
            D   +  V++ C+  E L  G + H  + KT    + FV +SL+++Y+KCG  +  + V 
Sbjct: 974  DSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVF 1033

Query: 176  KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
              M   +I + N +++ Y++N L + +   F  +    + P+  + +++L    S +++ 
Sbjct: 1034 TSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLL 1093

Query: 236  EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            +GK LH  T++L   S T + NAL+ MY+KCG  + AE++F+ +  +++I+W  +I G+ 
Sbjct: 1094 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 1153

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA----QVIKRGMA 351
             HGD    L L   +++ G  P++ TF   +++C     +H G++       +++K+   
Sbjct: 1154 SHGDCRTALSLFDELKKAGETPDDVTFLSLISAC-----NHSGFVEEGKNFFEIMKQDYG 1208

Query: 352  LGDFVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +   +     +VD+    G + EA   +K M   A S  W   ++    +   E  I + 
Sbjct: 1209 IEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSA 1268

Query: 410  SQMVR 414
             +++R
Sbjct: 1269 EKLLR 1273


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 188/621 (30%), Positives = 333/621 (53%), Gaps = 19/621 (3%)

Query: 127 CSREECLELGRRYHA-LITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           C+  + L  G+  HA  + +        ++   SLV++Y KCG +     +   MP  ++
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            S N L+AGY       +    F  +  + +  PN Y ++T L+ C     + EG Q H 
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE---GLVQRNVISWTAIINGFKQHGD 299
              K   +    V +AL+ MY +C  +E A  V +   G    ++ S+ +++N   + G 
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+ + ++  M ++ +  +  T+   +  CA +R+  +G   HA++++ G+   +FVG+ 
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM 261

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY   GE+  A+     + ++ + V W A +  + +N   EE++  F+ M R     
Sbjct: 262 LIDMYGKCGEVLNARNVFDGL-QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP 320

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +E+T++ +L AC+ + +L   + +H+R+ K  F+++V V ++LI  Y+K GS + +  VF
Sbjct: 321 NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVF 380

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + +   D+++WN+MI  YS +G  ++A+ +F+ MV     P   TF+ VLSA SH GLV+
Sbjct: 381 TDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVK 440

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G      +++ + I P   HY+CMV LL RAG L+ A  F+    +K     WR L  A
Sbjct: 441 EGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNA 500

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C  H +  +   I++ +L++DP D   Y  LSNMYA+A         RKLM+ + I KEP
Sbjct: 501 CHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEP 560

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKE 708
           G SW+++ N I+ F S+  +H E  ++Y+K++QL+  I+ +G+            D +KE
Sbjct: 561 GASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKE 620

Query: 709 DRVLYHSERLAVGFGLISLPA 729
             + YHSE+LA+ +GL+ +P+
Sbjct: 621 GYLSYHSEKLALAYGLMKIPS 641



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 140/275 (50%), Gaps = 1/275 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + V+  C++   L+LG R HA + +  +  D+FV + L++MY KCG++ +   V 
Sbjct: 220 DHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVF 279

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   ++     L+  Y +N  F+++ + F  +D     PN YT++ +L  C  ++A+ 
Sbjct: 280 DGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALR 339

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G  LHA+  KL + +   V NAL+ MY K G ++ + +VF  ++ R++I+W A+I G+ 
Sbjct: 340 HGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYS 399

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGD 354
            HG  ++ L++   M      PN  TF   L++ + L     G+ +   +++   +  G 
Sbjct: 400 HHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGL 459

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
              T +V + S  G + EA+  +K        V+W
Sbjct: 460 EHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAW 494


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 201/622 (32%), Positives = 326/622 (52%), Gaps = 15/622 (2%)

Query: 133 LELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           + LGR  HA I KT       F+   L+NMY+K    +S   V++  P  ++ S   L++
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G A+N  F  A   F ++    V PN +T+        SL     GKQ+HA  +K   + 
Sbjct: 82  GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V  +   MY K  + +DA  +F+ + +RN+ +W A I+     G   + +      R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
                PN  TF   L +C+   + ++G   H  V++ G      V   ++D Y    +I 
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            ++    EMG + ++VSW + +A + +N + E+A   + +  ++     +F  SS+L AC
Sbjct: 262 SSEIIFTEMG-TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + +  L     IH+  VK+  E  + VGS+L++ Y KCG  ED+E+ F ++   ++V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMV 549
           S+I  Y+  G+   A+ LFE+M   G  PT +  TF+++LSACS +G V++G K+F+SM 
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             YGI P   HYSC+VD+LGRAG +E A  FI  +PI+PT  +W  L  ACR H   ++ 
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
              ++ + +LDP D+  +V LSN +A AG  A+A   R+ +K   I K  G SWI V N+
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
           ++ F ++++SH    ++   L +L  ++E  G+            + EK   V +HSE+L
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620

Query: 719 AVGFGLISLPAKNKFECSRTLE 740
           A+ FGL+SLP       ++ L 
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLR 642


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 202/620 (32%), Positives = 331/620 (53%), Gaps = 14/620 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           ++LG   H    K+    D +V  +L+ MYAKCG ++    V   M   D  S N LL+G
Sbjct: 264 VKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSG 323

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
             +N L+  A ++F  +     +P+  +   ++A  G    +  GK++HA  ++    S 
Sbjct: 324 LVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSN 383

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             + N L+ MY KC  ++     FE + ++++ISWT II G+ Q+  + + + L   ++ 
Sbjct: 384 MQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQV 443

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G+D +       L +C+ L++ +     H  V KR +A    +  AIV++Y  +G    
Sbjct: 444 KGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDY 502

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A++  + + +S   VSW + I     N    EA+E F  + + +   D     S L A +
Sbjct: 503 ARRAFESI-RSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L SL   ++IH  +++  F     + SSL++ Y  CG+ E++ ++F  +   D++ W S
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTS 621

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI A   +G   +AI LF+KM  E + P + TFLA+L ACSHSGL+ +G++ FE M   Y
Sbjct: 622 MINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGY 681

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            + P   HY+CMVDLL R+  LE A  F+ ++PIKP++ +W  L  AC  HS+ ++ E  
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELA 741

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +K++L+ D  ++  Y  +SN++A  G   D EE R  MK   + K PGCSWIEV NKI+ 
Sbjct: 742 AKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHT 801

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQ----------QIEDIGHTDNEKED-RVLY-HSERLAV 720
           F +++KSH +   +Y KL Q  +          Q + + H  +E+E  ++LY HSERLA+
Sbjct: 802 FMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLAL 861

Query: 721 GFGLISLPAKNKFECSRTLE 740
           G+GL+  P       ++ L 
Sbjct: 862 GYGLLVTPKGTSIRITKNLR 881



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 203/413 (49%), Gaps = 5/413 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   + L  G++ HA + K+ +    F+   L++MY KCG +K  V V  +M    
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I + N ++  +  +  + +A   + ++  + V  +  T+ ++L  CG+L     G ++H 
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDY 300
             +K  +     V NAL+ MY KCG +  A  +F+G++  + + +SW +II+     G  
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L L   M+E G+  N YTF  AL          +G   H   +K       +V  A+
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G + +A++    M      VSWN  ++G  +N+   +A+  F  M  +    D
Sbjct: 290 IAMYAKCGRMEDAERVFASM-LCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           + +  +++ A     +L   +++H+  +++  +SN+ +G++LI+ Y KC   +     F 
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            +   D++SW ++I  Y+QN    +AI LF K+ V+G+        +VL ACS
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 212/461 (45%), Gaps = 17/461 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK--QMPY 180
           VL  C       LG   H +  K       FV  +L+ MY KCGD+     +     M  
Sbjct: 151 VLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEK 210

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +++ +       +A S F ++  + V  N YT+   L      S +  G  +
Sbjct: 211 EDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGI 270

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K  + +   V+NAL+ MY KCG MEDAE VF  ++ R+ +SW  +++G  Q+  Y
Sbjct: 271 HGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELY 330

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L     M+     P++ +    +A+     N   G   HA  I+ G+     +G  +
Sbjct: 331 RDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTL 390

Query: 361 VDMYSG------LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +DMY+       +G  +E   + K++      +SW   IAG+ +N+   EAI  F ++  
Sbjct: 391 IDMYAKCCCVKHMGYAFECMHE-KDL------ISWTTIIAGYAQNECHLEAINLFRKVQV 443

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D     S+L+ACS L S     +IH  + K    +++ + ++++  Y + G  + 
Sbjct: 444 KGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDY 502

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A R F  + + D+VSW SMI     NG   +A+ LF  +    I+P +   ++ LSA ++
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
              ++ G+++   ++++ G   E    S +VD+    G +E
Sbjct: 563 LSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVE 602



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 170/327 (51%), Gaps = 3/327 (0%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + +S +L +C ++ A+ +G+QLHA+ +K  +LS   ++  LL MY KCG ++DA  VF+ 
Sbjct: 47  HAHSLLLDLCVAVKALPQGQQLHARLLK-SHLS-AFLATKLLHMYEKCGSLKDAVKVFDE 104

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R + +W A++  F   G Y + + L   MR  G+  +  TF   L +C +L  S +G
Sbjct: 105 MTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLG 164

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFF 397
              H   +K G     FV  A++ MY   G++  A+      M +   +VSWN+ I+   
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
              K  EA+  F +M     A + +T+ + L+       +     IH   +KS   ++V+
Sbjct: 225 TEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVY 284

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V ++LI  Y KCG  EDAERVF+ +   D VSWN+++    QN   R A+  F  M    
Sbjct: 285 VANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSA 344

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKV 544
            +P   + L +++A   SG + +G++V
Sbjct: 345 QKPDQVSVLNLIAASGRSGNLLNGKEV 371



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 156/319 (48%), Gaps = 6/319 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +++   R   L  G+  HA   +  +  +  +  +L++MYAKC  +K M    
Sbjct: 348 DQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAF 407

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD--GIDVQPNHYTYSTMLAICGSLSA 233
           + M   D+ S   ++AGYA+N    +A + F K+   G+DV P      ++L  C  L +
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDP--MMIGSVLRACSGLKS 465

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            +  +++H    K + L+   + NA++ +Y + G  + A   FE +  ++++SWT++I  
Sbjct: 466 RNFIREIHGYVFK-RDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITC 524

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
              +G   + L L   +++  I P+      AL++ A+L +   G   H  +I++G  L 
Sbjct: 525 CVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLE 584

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             + +++VDMY+  G +  ++K    + K    + W + I     +    EAI  F +M 
Sbjct: 585 GPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWTSMINANGMHGCGNEAIALFKKMT 643

Query: 414 RNDAACDEFTYSSILKACS 432
             +   D  T+ ++L ACS
Sbjct: 644 DENVIPDHITFLALLYACS 662



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 1/134 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +I  LS  +    L+ G+  H  + +     +  + +SLV+MYA CG +++   + 
Sbjct: 549 DSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMF 608

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+     ++     +   ++A + F K+   +V P+H T+  +L  C     + 
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMV 668

Query: 236 EGKQLHAQTMKLQY 249
           EGK+   + MK  Y
Sbjct: 669 EGKRFF-EIMKYGY 681


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 189/591 (31%), Positives = 318/591 (53%), Gaps = 44/591 (7%)

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y  + L  Q+   F+ +    + P+H  + ++L  C  L  ++ G+ LH   +++     
Sbjct: 81  YTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD 140

Query: 253 TAVSNALLTMYIKCGMMEDA--------------------------------ESVFEGLV 280
               NAL+ MY K   +E++                                  +FE + 
Sbjct: 141 LYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP 200

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +++++SW  II G  ++G YE+ LR++  M    + P+ +T +  L   A   +   G  
Sbjct: 201 EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE 260

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   I++G+    +V ++++DMY+    + ++ +    + +    +SWN+ IAG  +N 
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER-DGISWNSIIAGCVQNG 319

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +E +  F QM+        +++SSI+ AC+ L +L   +Q+H  I ++ F+ N+ + S
Sbjct: 320 LFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 379

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL++ Y KCG+   A+++F ++   D+VSW +MI   + +G+A  AI LFE+M  EGI+P
Sbjct: 380 SLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKP 439

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            +  F+AVL+ACSH GLV +  K F SM +++GI P   HY+ + DLLGRAG+LE A  F
Sbjct: 440 NHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 499

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  + I PT  IW  L +ACR H ++ MAE ++ +ILE+DP++   Y+ L+N+Y+ A   
Sbjct: 500 ICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRW 559

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            +A + R  M+   I K P CSWIEV NK+Y F + ++SH    K+ E ++ L++ +E  
Sbjct: 560 KEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKE 619

Query: 701 G--------HTDNEKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           G        H D E+E +   V  HSERLA+ FG+I+ PA      ++ L 
Sbjct: 620 GYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLR 670



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 164/349 (46%), Gaps = 33/349 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK----------- 164
           D      VL  C+    L LG   H  I +  +  D +   +L+NMY+K           
Sbjct: 105 DHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQR 164

Query: 165 --CGDI-------------------KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
              G++                    S+  + + MP  D+ S N ++AG A+N L+++  
Sbjct: 165 LGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETL 224

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
               ++ G +++P+ +T S++L +      I  GK++H  +++    +   V+++L+ MY
Sbjct: 225 RMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMY 284

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KC  + D+  VF  L +R+ ISW +II G  Q+G +++ LR    M    I P  Y+F+
Sbjct: 285 AKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFS 344

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             + +CA L   H+G   H  + + G     F+ +++VDMY+  G I  AK+    M + 
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM-RL 403

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
              VSW A I G   + +  +AIE F QM       +   + ++L ACS
Sbjct: 404 RDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 34/405 (8%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+ +  + +QLHAQ +K Q  S     + LL++Y    ++ D+  +F  +     ++W +
Sbjct: 18  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I  +  HG   + L     M   G+ P+   F   L SCA L + ++G   H  +I+ G
Sbjct: 77  VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 350 MALGDFVGTAIVDMYS-------------GLGEIW------------------EAKKQLK 378
           +    + G A+++MYS             G GE++                  ++ +++ 
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           EM      VSWN  IAG  RN   EE +    +M   +   D FT SS+L   +    ++
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             ++IH   ++   +++++V SSLI+ Y KC    D+ RVF+ LT  D +SWNS+I    
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           QNG   + +  F +M++  I+P + +F +++ AC+H   +  G+++    +   G     
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL-HGYITRNGFDENI 375

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
              S +VD+  + G +  A      + ++     W  +   C  H
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALH 419



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 11/244 (4%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    +  +  D +V +SL++MYAKC  +     V   +   D  S N ++AG  +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQ 317

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N LFD+   FF ++    ++P  Y++S+++  C  L+ +  GKQLH    +  +     +
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +++L+ MY KCG +  A+ +F+ +  R+++SWTA+I G   HG     + L   M  +GI
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437

Query: 316 DPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
            PN   F   L +C     SH G +      F++     G+A G     A+ D+    G 
Sbjct: 438 KPNHVAFMAVLTAC-----SHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGR 492

Query: 370 IWEA 373
           + EA
Sbjct: 493 LEEA 496


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 199/615 (32%), Positives = 330/615 (53%), Gaps = 14/615 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +S  SR E   +G   HA      V  + FV +++V++Y K    +    V   MP  D 
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N +++G+++N+ F+ +   F+ +  + +  +  T +T+L     L     G  +   
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             K    S   V   L+++Y KCG       +F+ + Q ++IS+ A+I+G+  + + E  
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L   +   G   N  T    +       +  +  +     +K G+ L   V TA+  +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y  L E+  A+ QL +     S  SWNA I+G+ +N  T+ AI  F +M+    + +  T
Sbjct: 360 YCRLNEVQFAR-QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVT 417

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +SIL AC+ L +L+  + +H  I   + ESNV+V ++L++ Y KCGS  +A ++F  + 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +VV+WN+MI  Y  +G  ++A+ LF +M+  GI PT  TFL++L ACSHSGLV +G +
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SM   YG  P   HY+CMVD+LGRAG+L  AL FI  +P++P   +W  L  AC  H
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            + +MA   SK++ +LDP++   YV LSN+Y+       A   R+++K ++++K PGC+ 
Sbjct: 598 KNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTL 657

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT------------DNEKEDRV 711
           IE+ ++ Y F S ++SH +   ++E L++L  ++ + G+             D EKE  V
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMV 717

Query: 712 LYHSERLAVGFGLIS 726
             HSE+LA+ FGLIS
Sbjct: 718 NVHSEKLAIAFGLIS 732



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/491 (21%), Positives = 223/491 (45%), Gaps = 8/491 (1%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQP 216
           L + +   G +  +  +  ++   D+   N L+ G++ N L   +   +  L    +++P
Sbjct: 52  LTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRP 111

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +++TY+  ++    L     G  LHA ++     S   V +A++ +Y K    E A  VF
Sbjct: 112 DNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF 171

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + + +R+ + W  +I+GF ++  +E  +R+   M + G+  +  T    L + A L+   
Sbjct: 172 DVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYR 231

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G        K+G+    +V T ++ +YS  G+  + +    ++ +    +S+NA I+G+
Sbjct: 232 LGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ-PDLISYNAMISGY 290

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N +TE A+  F +++ +    +  T   ++        L     I +  +K       
Sbjct: 291 TFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQP 350

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L   Y +    + A ++F +     + SWN+MI  Y+QNG   +AI LF++M+ +
Sbjct: 351 SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ 410

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-E 575
            + P   T  ++LSAC+  G +  G+ V   ++K   +       + +VD+  + G + E
Sbjct: 411 -LSPNPVTVTSILSACAQLGALSIGKWV-HGLIKSERLESNVYVSTALVDMYAKCGSIVE 468

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMY 634
              +F  +L +      W  +      H   K A  +  ++L+   P     ++++    
Sbjct: 469 ARQLF--DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYAC 526

Query: 635 AEAGLQADAEE 645
           + +GL ++  E
Sbjct: 527 SHSGLVSEGNE 537



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 24/385 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F+  P+R  +  + +I          G SRN Y   +       +D G S      
Sbjct: 167 ARKVFDVMPERDTVLWNTMI---------SGFSRNSYFEDSIRVFVDMLDVGLS------ 211

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   +  VL+  +  +   LG     L +K  +  D +V   L+++Y+KCG 
Sbjct: 212 -------FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
                 +  Q+   D+ S N +++GY  N   + A + F +L     + N  T   ++ +
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
               + +   + +   ++K+  + + +VS AL T+Y +   ++ A  +F+   ++++ SW
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I+G+ Q+G  ++ + L   M    + PN  T T  L++CA L    +G   H  +  
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +    +V TA+VDMY+  G I EA +QL ++    + V+WNA I G+  +   +EA++
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEA-RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502

Query: 408 AFSQMVRNDAACDEFTYSSILKACS 432
            F +M+++       T+ SIL ACS
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACS 527



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 27/286 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A QLF++SP+++ L++ + + +GY        ++NG + R  S     +     N V VT
Sbjct: 369 ARQLFDESPEKS-LASWNAMISGY--------TQNGLTDRAISLFQEMMPQLSPNPVTVT 419

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                          +LS C++   L +G+  H LI    +  + +V+ +LV+MYAKCG 
Sbjct: 420 --------------SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I     +   M   ++ + N ++ GY  +    +A   F ++    + P   T+ ++L  
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525

Query: 228 CGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVI 285
           C     + EG ++ H+      +   +     ++ +  + G + +A    E + ++    
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA 585

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
            W A++     H + E  +  V   R   +DP    + V L++  S
Sbjct: 586 VWGALLGACMIHKNTE--MANVASKRLFQLDPENVGYYVLLSNIYS 629


>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 187/590 (31%), Positives = 321/590 (54%), Gaps = 11/590 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +++ L +    + L+L R+ H+ I    +  + F+   L+  YA C        V   + 
Sbjct: 26  LLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQ 85

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           + ++   N L+ G  KN L+++AF  F ++   DV P+ +T ST+  +   L A+  GK 
Sbjct: 86  HKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H ++++  ++S T V+N++++MY KCG  +++  VF+ +  RN  SW  +I G+   G+
Sbjct: 146 IHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205

Query: 300 ---YEKPLRLVCLMREDGIDPNEYTFTVALASC-ASLRNSHMGYMFHAQVIKRGMALG-- 353
               E+    V  M+ D + P+ YT +  L  C   +     G   H  ++K  + LG  
Sbjct: 206 CNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLD 265

Query: 354 --DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               +G  ++DMYS   ++   ++    M K  +  SW A I G+  N  ++EA+  F  
Sbjct: 266 SDVHLGCCLIDMYSRSNKVVVGRRVFDRM-KCRNVFSWTAMINGYVENGDSDEALSLFRD 324

Query: 412 M-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           M V +    +  +  S+L ACS    L +  QIH   V+ +  + V + ++LI+ Y+KCG
Sbjct: 325 MQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384

Query: 471 SWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           S + A RVF   +   D +SW+SMI  Y  +G+ ++AI+L++KM+  GIRP   T + +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SAC  SGLV +G  ++ S++ +YGI P     +C+VD+LGRAG+L+ AL FI  +P++P 
Sbjct: 445 SACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPG 504

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L +    H DL+M E   + +++L+P + + YV++SN+YA +       E R++
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRM 564

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           MK K + K PGCSWI + NK + F+  +K+H     +Y  L  L+  + D
Sbjct: 565 MKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDLLLTMND 614


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 199/615 (32%), Positives = 330/615 (53%), Gaps = 14/615 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +S  SR E   +G   HA      V  + FV +++V++Y K    +    V   MP  D 
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDT 179

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N +++G+++N+ F+ +   F+ +  + +  +  T +T+L     L     G  +   
Sbjct: 180 VLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCL 239

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             K    S   V   L+++Y KCG       +F+ + Q ++IS+ A+I+G+  + + E  
Sbjct: 240 ASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESA 299

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L   +   G   N  T    +       +  +  +     +K G+ L   V TA+  +
Sbjct: 300 VTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTV 359

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y  L E+  A+ QL +     S  SWNA I+G+ +N  T+ AI  F +M+    + +  T
Sbjct: 360 YCRLNEVQFAR-QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVT 417

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +SIL AC+ L +L+  + +H  I   + ESNV+V ++L++ Y KCGS  +A ++F  + 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +VV+WN+MI  Y  +G  ++A+ LF +M+  GI PT  TFL++L ACSHSGLV +G +
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SM   YG  P   HY+CMVD+LGRAG+L  AL FI  +P++P   +W  L  AC  H
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            + +MA   SK++ +LDP++   YV LSN+Y+       A   R+++K ++++K PGC+ 
Sbjct: 598 KNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTL 657

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT------------DNEKEDRV 711
           IE+ ++ Y F S ++SH +   ++E L++L  ++ + G+             D EKE  V
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMV 717

Query: 712 LYHSERLAVGFGLIS 726
             HSE+LA+ FGLIS
Sbjct: 718 NVHSEKLAIAFGLIS 732



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/491 (21%), Positives = 223/491 (45%), Gaps = 8/491 (1%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQP 216
           L + +   G +  +  +  ++   D+   N L+ G++ N L   +   +  L    +++P
Sbjct: 52  LTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRP 111

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +++TY+  ++    L     G  LHA ++     S   V +A++ +Y K    E A  VF
Sbjct: 112 DNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVF 171

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + + +R+ + W  +I+GF ++  +E  +R+   M + G+  +  T    L + A L+   
Sbjct: 172 DVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYR 231

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G        K+G+    +V T ++ +YS  G+  + +    ++ +    +S+NA I+G+
Sbjct: 232 LGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ-PDLISYNAMISGY 290

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N +TE A+  F +++ +    +  T   ++        L     I +  +K       
Sbjct: 291 TFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQP 350

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L   Y +    + A ++F +     + SWN+MI  Y+QNG   +AI LF++M+ +
Sbjct: 351 SVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ 410

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-E 575
            + P   T  ++LSAC+  G +  G+ V   ++K   +       + +VD+  + G + E
Sbjct: 411 -LSPNPVTVTSILSACAQLGALSIGKWV-HGLIKSERLESNVYVSTALVDMYAKCGSIVE 468

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMY 634
              +F  +L +      W  +      H   K A  +  ++L+   P     ++++    
Sbjct: 469 ARQLF--DLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYAC 526

Query: 635 AEAGLQADAEE 645
           + +GL ++  E
Sbjct: 527 SHSGLVSEGNE 537



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 24/385 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A ++F+  P+R  +  + +I          G SRN Y   +       +D G S      
Sbjct: 167 ARKVFDVMPERDTVLWNTMI---------SGFSRNSYFEDSIRVFVDMLDVGLS------ 211

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   +  VL+  +  +   LG     L +K  +  D +V   L+++Y+KCG 
Sbjct: 212 -------FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGK 264

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
                 +  Q+   D+ S N +++GY  N   + A + F +L     + N  T   ++ +
Sbjct: 265 SCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPV 324

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
               + +   + +   ++K+  + + +VS AL T+Y +   ++ A  +F+   ++++ SW
Sbjct: 325 YLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASW 384

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I+G+ Q+G  ++ + L   M    + PN  T T  L++CA L    +G   H  +  
Sbjct: 385 NAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKS 443

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +    +V TA+VDMY+  G I EA +QL ++    + V+WNA I G+  +   +EA++
Sbjct: 444 ERLESNVYVSTALVDMYAKCGSIVEA-RQLFDLMVDKNVVTWNAMITGYGLHGHGKEALK 502

Query: 408 AFSQMVRNDAACDEFTYSSILKACS 432
            F +M+++       T+ SIL ACS
Sbjct: 503 LFYEMLQSGIPPTGVTFLSILYACS 527



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 124/286 (43%), Gaps = 27/286 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A QLF++SP+++ L++ + + +GY        ++NG + R  S     +     N V VT
Sbjct: 369 ARQLFDESPEKS-LASWNAMISGY--------TQNGLTDRAISLFQEMMPQLSPNPVTVT 419

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                          +LS C++   L +G+  H LI    +  + +V+ +LV+MYAKCG 
Sbjct: 420 --------------SILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGS 465

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I     +   M   ++ + N ++ GY  +    +A   F ++    + P   T+ ++L  
Sbjct: 466 IVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYA 525

Query: 228 CGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVI 285
           C     + EG ++ H+      +   +     ++ +  + G + +A    E + ++    
Sbjct: 526 CSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPA 585

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
            W A++     H + E  +  V   R   +DP    + V L++  S
Sbjct: 586 VWGALLGACMIHKNTE--MANVASKRLFQLDPENVGYYVLLSNIYS 629


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 185/524 (35%), Positives = 307/524 (58%), Gaps = 26/524 (4%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQT---MKLQYLSKTA-----VSNALLTMYIKCGMMED 271
           + + ++ +C       +G+ +H       +L + S  A     VSN+L++MY K G+++D
Sbjct: 74  SLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKFGLLDD 133

Query: 272 AESVFEGLVQRNVISWTAIINGFKQ-HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           A  +F+ + +RNV++WT ++       G  E+ LR +  M  DG+ PN YTF+  L +C 
Sbjct: 134 ALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACG 193

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +     +    HA  +K G+    FV ++++D Y  LG++   ++   EM  +   V WN
Sbjct: 194 T---PGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEM-VTRDLVVWN 249

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + IAGF ++     AIE F +M     + ++ T +S+L+AC+ +  L    Q+H+ ++K 
Sbjct: 250 SIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK- 308

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            +E ++ + ++L++ Y KCGS EDAE +F ++   DV+SW++MI   +QNG++ +A+ +F
Sbjct: 309 -YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVF 367

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           + M  EG+ P   T + VL ACSH+GLV+DG   F SM K +GI PE  H++CMVDLLGR
Sbjct: 368 DLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGR 427

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AGKL+ A+ FI ++ ++P A IWR L  ACR H    +A + +++IL+L+PDD    V L
Sbjct: 428 AGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLL 487

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN YA+     DAE+  K M+ + + KEPG SWIE+   ++ F + + SH     + ++L
Sbjct: 488 SNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIELEKHVHVFIAGDLSHPCSDTIVQEL 547

Query: 691 KQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFG 723
            +L+ +I  +G+              +KED + YHSE++A+ FG
Sbjct: 548 NRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYHSEKMAIAFG 591



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK-NALFDQAFSFFLK 208
           G  FV+ SLV+MYAK G +   + +  +MP  ++ +   ++A  A  +   ++A  F + 
Sbjct: 113 GGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVA 172

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    V PN YT+S++L  CG+   +     LHA T+K+   S   V ++L+  Y+K G 
Sbjct: 173 MWRDGVAPNAYTFSSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGD 229

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ++    VF+ +V R+++ W +II GF Q GD    + L   M++ G   N+ T T  L +
Sbjct: 230 LDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRA 289

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C  +     G   HA V+K    L   +  A++DMY   G + +A+     M +    +S
Sbjct: 290 CTGMVMLEAGRQVHAHVLKYERDL--ILHNALLDMYCKCGSLEDAEALFHRMPQR-DVIS 346

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           W+  I+G  +N K+ EA+  F  M     A +  T   +L ACS
Sbjct: 347 WSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACS 390



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 13/261 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA   K  +  D FV +SL++ Y K GD+     V  +M   D+   N ++AG+A++   
Sbjct: 202 HASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDG 261

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             A   F+++       N  T +++L  C  +  ++ G+Q+HA  +K  Y     + NAL
Sbjct: 262 VGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNAL 319

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG +EDAE++F  + QR+VISW+ +I+G  Q+G   + LR+  LM+ +G+ PN 
Sbjct: 320 LDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNR 379

Query: 320 YTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            T    L +C     SH G      Y F +     G+         +VD+    G++ EA
Sbjct: 380 ITMVGVLFAC-----SHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEA 434

Query: 374 KKQLKEMGKSASSVSWNAQIA 394
            + +++M     +V W   + 
Sbjct: 435 VEFIRDMNLEPDAVIWRTLLG 455



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL  C+    LE GR+ HA + K     D  +  +L++MY KCG ++   A+  +MP
Sbjct: 283 LTSVLRACTGMVMLEAGRQVHAHVLKYER--DLILHNALLDMYCKCGSLEDAEALFHRMP 340

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S + +++G A+N    +A   F  +    V PN  T   +L  C     +++G  
Sbjct: 341 QRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWY 400

Query: 240 LHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQH 297
                 KL  +  +    N ++ +  + G +++A E + +  ++ + + W  ++   + H
Sbjct: 401 YFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMH 460


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 320/581 (55%), Gaps = 2/581 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+ +  ++LG + H L+  + V  +  +  SL++MY+KCG       + + M   D
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + NC+++GY ++ L +++ +FF ++    V P+  T+S++L        ++  KQ+H 
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             M+        +++AL+  Y KC  +  A+++F      +V+ +TA+I+G+  +G Y  
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   + +  I PNE T    L     L    +G   H  +IK+G      +G A++D
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A +  + + K    VSWN+ I    ++     AI+ F QM  +    D  
Sbjct: 485 MYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + S+ L AC+ LPS +  + IH  ++K    S+V+  S+LI+ Y KCG+ + A  VF  +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDG 541
              ++VSWNS+I A   +G+ + ++ LF +MV + GIRP   TFL ++S+C H G V +G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F SM ++YGI P++ HY+C+VDL GRAG+L  A   + ++P  P A +W  L  ACR
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++AE  S ++++LDP ++  YV +SN +A A       + R LMK +E+ K PG 
Sbjct: 724 LHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGY 783

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           SWIE+  + + F S + +H E   +Y  L  L+ ++   G+
Sbjct: 784 SWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 231/475 (48%), Gaps = 6/475 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           ++FV +SL+  Y + G I     +  ++   D    N +L GYAK    D     F  + 
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              + PN  T+  +L++C S   ID G QLH   +      + ++ N+LL+MY KCG  +
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  +F  + + + ++W  +I+G+ Q G  E+ L     M   G+ P+  TF+  L S +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              N       H  +++  ++L  F+ +A++D Y     +  A+    +   S   V + 
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC-NSVDVVVFT 410

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+G+  N    +++E F  +V+   + +E T  SIL    +L +L    ++H  I+K 
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            F++  ++G ++I+ Y KCG    A  +F +L+  D+VSWNSMI   +Q+     AI +F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M V GI     +  A LSAC++      G+ +   M+K + +  +    S ++D+  +
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAK 589

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE---LDPD 622
            G L+ A+     +  K     W  + AAC  H  LK +  +  +++E   + PD
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 231/481 (48%), Gaps = 7/481 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           +L  CS    L  G++ HA +   ++ GD +    ++ MYA CG       +  ++    
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 182 -DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             I   N +++ + +N L +QA +F+ K+    V P+  T+  ++  C +L        L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
                 L       V+++L+  Y++ G ++    +F+ ++Q++ + W  ++NG+ + G  
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           +  ++   +MR D I PN  TF   L+ CAS     +G   H  V+  G+     +  ++
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MYS  G   +A K  + M + A +V+WN  I+G+ ++   EE++  F +M+ +    D
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T+SS+L + S   +L  C+QIH  I++     ++ + S+LI+AY KC     A+ +FS
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q  + DVV + +MI  Y  NG    ++ +F  +V   I P   T +++L        ++ 
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459

Query: 541 GQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G+++   ++K+        +  C ++D+  + G++ +A      L  +     W  +   
Sbjct: 460 GRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITR 516

Query: 600 C 600
           C
Sbjct: 517 C 517



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 7/316 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S +L  C + + + +GKQ+HA  +       +     +L MY  CG   D   +F  L  
Sbjct: 39  SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98

Query: 282 R--NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           R  ++  W +II+ F ++G   + L     M   G+ P+  TF   + +C +L+N     
Sbjct: 99  RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
                V   GM   +FV ++++  Y   G+I +   +L +       V WN  + G+ + 
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKI-DVPSKLFDRVLQKDCVIWNVMLNGYAKC 217

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACS--LLPSLATCEQIHSRIVKSKFESNVH 457
              +  I+ FS M  +  + +  T+  +L  C+  LL  L    Q+H  +V S  +    
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV--QLHGLVVVSGVDFEGS 275

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + +SL+  Y+KCG ++DA ++F  ++ AD V+WN MI  Y Q+G   +++  F +M+  G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335

Query: 518 IRPTNSTFLAVLSACS 533
           + P   TF ++L + S
Sbjct: 336 VLPDAITFSSLLPSVS 351



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 2/257 (0%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            ++ L +C++      G   HA +I   ++   +    I+ MY+  G   +  K    + 
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 382 KSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
              SS+  WN+ I+ F RN    +A+  + +M+    + D  T+  ++KAC  L +    
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + +   +     + N  V SSLI+AY + G  +   ++F ++   D V WN M+  Y++ 
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G     I  F  M ++ I P   TF  VLS C+   L+  G ++   +V   G+  E + 
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSI 276

Query: 561 YSCMVDLLGRAGKLEIA 577
            + ++ +  + G+ + A
Sbjct: 277 KNSLLSMYSKCGRFDDA 293


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 189/589 (32%), Positives = 313/589 (53%), Gaps = 49/589 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D +   +L++ YAK G ++++  V  QMPY D  S N L+A +A N    +A    +++ 
Sbjct: 88  DVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQ 147

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               QP  Y++   L  C  L  +  GKQ+H + +       T V NA+  MY KCG ++
Sbjct: 148 EDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDID 207

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F+G++ +NV+SW  +I+G+ + G+  + + L   M+  G+ P+  T +       
Sbjct: 208 KARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVS------- 260

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                        +++ Y   G + +A+    ++ K    + W 
Sbjct: 261 ----------------------------NVLNAYFRCGRVDDARNLFIKLPKK-DEICWT 291

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I G+ +N + E+A   F  M+R +   D +T SS++ +C+ L SL   + +H ++V  
Sbjct: 292 TMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVM 351

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             ++++ V S+L++ Y KCG   DA  +F  +   +V++WN+MI  Y+QNG+  +A+ L+
Sbjct: 352 GIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLY 411

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E+M  E  +P N TF+ VLSAC ++ +V++GQK F+S + E+GI P   HY+CM+ LLGR
Sbjct: 412 ERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDS-ISEHGIAPTLDHYACMITLLGR 470

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           +G ++ A+  I  +P +P   IW  L + C    DLK AE  +  + ELDP +A  Y+ L
Sbjct: 471 SGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIML 529

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+YA  G   D    R LMK K   K    SW+EV NK++RF S++  H E+ K+Y +L
Sbjct: 530 SNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGEL 589

Query: 691 KQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
            +L+  ++ IG+            + EK   + YHSE+LA+ F LI  P
Sbjct: 590 NRLISILQQIGYNPDTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKP 638



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 66/297 (22%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L  CS+   L  G++ H  I    +  + FV  ++ +MYAKCGDI     +   M  
Sbjct: 159 VNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMID 218

Query: 181 LDIASCNCLLAGYAK------------------------------NALF-----DQAFSF 205
            ++ S N +++GY K                              NA F     D A + 
Sbjct: 219 KNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNL 278

Query: 206 FLKLDGID-------------------------------VQPNHYTYSTMLAICGSLSAI 234
           F+KL   D                               V+P+ YT S+M++ C  L+++
Sbjct: 279 FIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASL 338

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+ +H + + +   +   VS+AL+ MY KCG+  DA  +FE +  RNVI+W A+I G+
Sbjct: 339 YHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGY 398

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            Q+G   + L L   M+++   P+  TF   L++C +      G  +   + + G+A
Sbjct: 399 AQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIA 455



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 88/178 (49%), Gaps = 3/178 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++S C++   L  G+  H  +    +     V+++LV+MY KCG       + 
Sbjct: 321 DSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIF 380

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + MP  ++ + N ++ GYA+N    +A + + ++   + +P++ T+  +L+ C +   + 
Sbjct: 381 ETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVK 440

Query: 236 EGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR-NVISWTAII 291
           EG Q +  ++    ++ T    A ++T+  + G ++ A  + +G+    N   W+ ++
Sbjct: 441 EG-QKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL 497


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 194/546 (35%), Positives = 298/546 (54%), Gaps = 5/546 (0%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           + L  C+  + L+ G++ H  I K     D  V   L++MYAKCG+IKS   V + +   
Sbjct: 159 KALKACTEVQDLDNGKKIHCQIVKVPSF-DNVVLTGLLDMYAKCGEIKSSYKVFEDITLR 217

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++     ++AGY KN L+++    F ++    V  N YTY T++  C  L A+ +GK  H
Sbjct: 218 NVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFH 277

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K      + +  +LL MY+KCG + +A  VF      +++ WTA+I G+  +G   
Sbjct: 278 GCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 337

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M   GI PN  T    L+ C  + N  +G   H   IK G+   + V  A+V
Sbjct: 338 EALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN-VANALV 396

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY+   +  +AK    EM      V+WN+ I+GF +N    EA+  F +M       + 
Sbjct: 397 HMYAKCYQNRDAKYVF-EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNG 455

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF--ESNVHVGSSLIEAYNKCGSWEDAERVF 479
            T +S+  AC+ L SLA    +H+  VK  F   S+VHVG++L++ Y KCG  E A  +F
Sbjct: 456 VTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIF 515

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +   + ++W++MI  Y + G  + ++ LFE+M+ +  +P  STF +VLSACSH+G+V 
Sbjct: 516 DTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVN 575

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+K F SM K+Y   P   HY+CMVD+L RAG+LE AL  I  +PI+P    +      
Sbjct: 576 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 635

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C  HS   + E + K++L+L PDDA+ YV +SN+YA  G  + A+E R LMK + +SK  
Sbjct: 636 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIA 695

Query: 660 GCSWIE 665
           G S +E
Sbjct: 696 GHSIME 701



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 227/486 (46%), Gaps = 8/486 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+  + L   R+ H ++T   + GD  +   LV++Y   G  K    V  Q+P  D
Sbjct: 62  LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPD 118

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
                 +L  Y  N    +   F+  L       +   +S  L  C  +  +D GK++H 
Sbjct: 119 FYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHC 178

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q +K+       ++  LL MY KCG ++ +  VFE +  RNV+ WT++I G+ ++  YE+
Sbjct: 179 QIVKVPSFDNVVLT-GLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEE 237

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   MRE+ +  NEYT+   + +C  LR  H G  FH  +IK G+ L   + T+++D
Sbjct: 238 GLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLD 297

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G+I  A++   E       V W A I G+  N    EA+  F +M       +  
Sbjct: 298 MYVKCGDISNARRVFNEHSH-VDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCV 356

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L  C L+ +L     IH   +K     + +V ++L+  Y KC    DA+ VF   
Sbjct: 357 TIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEME 415

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  D+V+WNS+I  +SQNG   +A+ LF +M  E + P   T  ++ SAC+  G +  G 
Sbjct: 416 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGS 475

Query: 543 KVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            +    VK   +     H  + ++D   + G  E A +    +  K T   W  +     
Sbjct: 476 SLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTIT-WSAMIGGYG 534

Query: 602 CHSDLK 607
              D K
Sbjct: 535 KQGDTK 540



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 4/264 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VLS C     LELGR  H L  K  +  D  V  +LV+MYAKC   +    V +   
Sbjct: 358 IASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMES 416

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI + N +++G+++N    +A   F +++   V PN  T +++ + C SL ++  G  
Sbjct: 417 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSS 476

Query: 240 LHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           LHA ++KL +L+ ++  V  ALL  Y KCG  E A  +F+ + ++N I+W+A+I G+ + 
Sbjct: 477 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQ 536

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFV 356
           GD +  L L   M +    PNE TFT  L++C+     + G  + + + K          
Sbjct: 537 GDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKH 596

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEM 380
            T +VDM +  GE+ +A   +++M
Sbjct: 597 YTCMVDMLARAGELEQALDIIEKM 620


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 189/566 (33%), Positives = 318/566 (56%), Gaps = 30/566 (5%)

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P + I S  CL      +  F  A +    +    V+ +  +   ++ +C     + +G+
Sbjct: 33  PLVSIFSRLCL------DGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGR 86

Query: 239 QLHAQT------MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            +H                   VSN+L++MY K GM++DA  +F G+ QRNV+SWT ++ 
Sbjct: 87  AIHRHVSLCAHGGGGATHGSLFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVA 146

Query: 293 GFKQH-GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
                 G  ++ LR +  MR DG+  N YTF+  L +C +     +    HA +IK G+ 
Sbjct: 147 ALANAPGRKKEALRFLVEMRRDGVAANSYTFSSVLGACGT---PGVLAAMHADIIKVGLD 203

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FV ++++D Y  LG++   +    EM  +   V WN+ IAGF ++     A+E F +
Sbjct: 204 SDVFVRSSLIDAYMKLGDLDSGRGVFDEM-VTCDLVVWNSIIAGFAQSGDGVGAMELFMR 262

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M  +    ++ T +S+L+AC+ +  L    Q+H+ ++K  ++ ++ + ++L++ Y KCG 
Sbjct: 263 MKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGC 320

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             DA+ +FS++   DV+SW++MI   +QNGR+ +A+ +F+ M  EG  P N T + VL A
Sbjct: 321 LLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFA 380

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH+GLV+DG   F SM K +GI PE  H +CMVDLLGRAGKL+ A+ FI  +  +P + 
Sbjct: 381 CSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSV 440

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IWR L  ACR H +  +A + + +IL+L+P+D    + LSN+YA+    ++AE+  K M+
Sbjct: 441 IWRTLLGACRMHKNATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMR 500

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------ 705
            + + KEPG SWIE+   ++ F +   SH    ++ ++L +L+++ +D+G+         
Sbjct: 501 DQGVKKEPGRSWIELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQ 560

Query: 706 -----EKEDRVLYHSERLAVGFGLIS 726
                +KED + YHSE+LA+ FG ++
Sbjct: 561 DLGTEQKEDLLKYHSEKLAIAFGTMN 586



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 7/281 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDG 211
           FV+ SLV+MYAK G +   + +   MP  ++ S   ++A  A       +A  F +++  
Sbjct: 108 FVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V  N YT+S++L  CG+   +     +HA  +K+   S   V ++L+  Y+K G ++ 
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
              VF+ +V  +++ W +II GF Q GD    + L   M+E G   N+ T T  L +C  
Sbjct: 225 GRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTG 284

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           +    +G   HA V+K    L   +  A++DMY   G + +A      M      +SW+ 
Sbjct: 285 MVMLEVGRQVHAHVLKYDRDL--ILHNALLDMYCKCGCLLDADALFSRM-HDRDVISWST 341

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
            I+G  +N ++ EA++ F  M       +  T   +L ACS
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACS 382



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 3/256 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I K  +  D FV +SL++ Y K GD+ S   V  +M   D+   N ++AG+A++   
Sbjct: 194 HADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDG 253

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
             A   F+++       N  T +++L  C  +  ++ G+Q+HA  +K  Y     + NAL
Sbjct: 254 VGAMELFMRMKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNAL 311

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG + DA+++F  +  R+VISW+ +I+G  Q+G   + L++  LM+ +G  PN 
Sbjct: 312 LDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNN 371

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            T    L +C+       G+ +   + K  G+         +VD+    G++ EA K + 
Sbjct: 372 ITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIG 431

Query: 379 EMGKSASSVSWNAQIA 394
           EM     SV W   + 
Sbjct: 432 EMKFEPDSVIWRTLLG 447



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L ++  +  VL  C+    LE+GR+ HA + K     D  +  +L++MY KCG +    A
Sbjct: 269 LANQGTLTSVLRACTGMVMLEVGRQVHAHVLKYDR--DLILHNALLDMYCKCGCLLDADA 326

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +  +M   D+ S + +++G A+N    +A   F  +      PN+ T   +L  C     
Sbjct: 327 LFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGL 386

Query: 234 IDEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAII 291
           +++G        KL  +  +    N ++ +  + G +++A + + E   + + + W  ++
Sbjct: 387 VEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLL 446

Query: 292 NGFKQH 297
              + H
Sbjct: 447 GACRMH 452


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/622 (32%), Positives = 322/622 (51%), Gaps = 15/622 (2%)

Query: 133 LELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           + LGR  HA I KT       F+   L+NMY+K    +S   V++  P  ++ S   L++
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVS 81

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G A+N  F  A   F ++    V PN +T+  +     SL     GKQ+HA  +K   + 
Sbjct: 82  GLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRIL 141

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V  +   MY K  + +DA  +F+ + +RN+ +W A I+     G  ++ +      R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFR 201

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G  PN  TF   L +C+      +G   H  V + G      V   ++D Y    +I 
Sbjct: 202 RIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIR 261

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            ++    EMG   ++VSW + +A + +N + E+A   + +  +      +F  SS+L AC
Sbjct: 262 SSEIIFAEMGMK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSAC 320

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + +  L     IH+  VK+  E N+ VGS+L++ Y KCG  ED+E+ F ++   ++V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLN 380

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMV 549
           S+I  Y+  G+   A+ LFE M   G  P  +  TF+++LSACS +G V++G K+F+SM 
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMK 440

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             YGI P   HYSC+VD+LGRAG +E A  FI  +PIKPT  +W  L  ACR H    + 
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLG 500

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
              ++ + +LDP D+  +V LSN +A AG  A+A   R+ MK   I K  G SWI V N+
Sbjct: 501 ILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQ 560

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
           ++ F ++++SH    ++   L +L  ++E  G+            + EK   V +HSE+L
Sbjct: 561 VHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620

Query: 719 AVGFGLISLPAKNKFECSRTLE 740
           A+ FGL++LP       ++ L 
Sbjct: 621 ALAFGLVALPLSVPIRITKNLR 642



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 3/271 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ CS    L+LG + H L+ ++    D  V   L++ Y KC  I+S   +  +M   + 
Sbjct: 216 LNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNA 275

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+A Y +N   ++A   +L+     V+ + +  S++L+ C  ++ ++ G+ +HA 
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAH 335

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V +AL+ MY KCG +ED+E  F+ + ++N+++  ++I G+   G  +  
Sbjct: 336 AVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMA 395

Query: 304 LRLVCLM--REDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAI 360
           L L   M  R  G  PN  TF   L++C+       G  +F +     G+  G    + I
Sbjct: 396 LALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCI 455

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           VDM    G + +A + +K+M    +   W A
Sbjct: 456 VDMLGRAGMVEQAFEFIKKMPIKPTISVWGA 486



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 6/181 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LELGR  HA   K  V  + FV ++LV+MY KCG I+       +MP  +
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375

Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + + N L+ GYA     D A + F  +   G    PN+ T+ ++L+ C    A++ G ++
Sbjct: 376 LVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKI 435

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQH 297
              +MK  Y  +    +   ++ M  + GM+E A    + +  +  IS W A+ N  + H
Sbjct: 436 F-DSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMH 494

Query: 298 G 298
           G
Sbjct: 495 G 495


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 180/532 (33%), Positives = 309/532 (58%), Gaps = 13/532 (2%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           L+ DG DV  +  TY  +++ C  L +I   K++    +   +     V N +L +++KC
Sbjct: 108 LEHDGFDVGGS--TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKC 165

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G+M DA  +F+ + ++++ SW  +I GF   G++ +   L   M E+  D    TFT  +
Sbjct: 166 GLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMI 225

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            + A L    +G   H+  +KRG+    FV  A++DMYS  G I +A     +M +  ++
Sbjct: 226 RASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEK-TT 284

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V WN+ IA +  +  +EEA+  + +M  + A  D FT S +++ C+ L SL   +Q H+ 
Sbjct: 285 VGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAA 344

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +V+  +++++   ++L++ Y+K G  EDA  VF+++   +V+SWN++I  Y  +G+  +A
Sbjct: 345 LVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEA 404

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + +FE+M+ EG+ P + TFLAVLSACS+SGL + G ++F SM +++ + P   HY+CMV+
Sbjct: 405 VEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVE 464

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LLGR G L+ A   I + P KPT  +W  L  ACR H +L++ +  ++ +  ++P+    
Sbjct: 465 LLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCN 524

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           Y+ L N+Y  +G   +A    + +K K +   P C+WIEV  + Y F   +KSHS+  ++
Sbjct: 525 YIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEI 584

Query: 687 YEKLKQLMQQIEDIGHTD---------NEKEDRVL-YHSERLAVGFGLISLP 728
           YEK+  +M +I   G+ +         +E+E R+L YHSE+LA+ FGLI+ P
Sbjct: 585 YEKVNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAIAFGLINTP 636



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 116/207 (56%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +++GR+ H+   K  V  D FV+ +L++MY+KCG I+    V  QMP       N ++A 
Sbjct: 234 VQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIAS 293

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA +   ++A SF+ ++     + +H+T S ++ IC  L++++  KQ HA  ++  Y + 
Sbjct: 294 YALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTD 353

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              + AL+  Y K G MEDA  VF  + ++NVISW A+I G+  HG  E+ + +   M  
Sbjct: 354 IVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLR 413

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGY 339
           +G+ PN  TF   L++C+    S  G+
Sbjct: 414 EGMIPNHVTFLAVLSACSYSGLSERGW 440



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+R   LE  ++ HA + +     D     +LV+ Y+K G ++    V  +M   +
Sbjct: 325 VIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKN 384

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+AGY  +   ++A   F ++    + PNH T+  +L+ C      + G ++  
Sbjct: 385 VISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFY 444

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQHGDY 300
              +   +   A+  A ++ +  + G++++A E +     +     W  ++   + H + 
Sbjct: 445 SMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENL 504

Query: 301 E 301
           E
Sbjct: 505 E 505


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/649 (30%), Positives = 350/649 (53%), Gaps = 30/649 (4%)

Query: 120 VIEVLSYCSR---EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ V++ CS     E L +G++ HA   +     + F+  +LV MY K G + S   ++ 
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                D+ + N +L+   +N    +A  +  ++    V+P+ +T S++L  C  L  +  
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320

Query: 237 GKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           GK+LHA  +K   L + + V +AL+ MY  C  +     VF+G+  R +  W A+I G+ 
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380

Query: 296 QHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q+   ++ L L   M E  G+  N  T    + +C            H  V+KRG+    
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-- 412
           FV   ++DMYS LG+I  A +   +M +    V+WN  I G+  ++  E+A+    +M  
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 413 ---------VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
                     R     +  T  +IL +C+ L +LA  ++IH+  +K+   ++V VGS+L+
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF Q+   +V++WN +I AY  +G  ++AI L   M+V+G++P   
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF++V +ACSHSG+V +G ++F  M  +YG+ P   HY+C+VDLLGRAG+++ A   ++ 
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679

Query: 584 LPIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
           +P     A  W  L  A R H++L++ E  ++ +++L+P+ A+ YV L+N+Y+ AGL   
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           A E R+ MK + + KEPGCSWIE  +++++F + + SH +  K+   L+ L +++   G+
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799

Query: 703 T-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                       ++EKE  +  HSE+LA+ FG+++         ++ L 
Sbjct: 800 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 848



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 201/396 (50%), Gaps = 9/396 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           LL    ++ L  +A   ++ +  + ++P++Y +  +L     L  ++ GKQ+HA   K  
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 249 Y-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
           Y +    V+N L+ +Y KCG       VF+ + +RN +SW ++I+       +E  L   
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 308 CLMREDGIDPNEYTFTVALASCASL---RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
             M ++ ++P+ +T    + +C++L       MG   HA  +++G  L  F+   +V MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
             LG++  +K  L   G     V+WN  ++   +N++  EA+E   +MV      DEFT 
Sbjct: 247 GKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           SS+L ACS L  L T +++H+  +K+   + N  VGS+L++ Y  C       RVF  + 
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +  WN+MI  YSQN   ++A++LF  M    G+   ++T   V+ AC  SG     +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            +   +VK  G+  +    + ++D+  R GK++IA+
Sbjct: 426 AIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAM 460



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 239/490 (48%), Gaps = 21/490 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           +ELG++ HA + K     D    A +LVN+Y KCGD  ++  V  ++   +  S N L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL---SAIDEGKQLHAQTMKLQ 248
                  ++ A   F  +   +V+P+ +T  +++  C +L     +  GKQ+HA  ++  
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            L+ + + N L+ MY K G +  ++ +      R++++W  +++   Q+    + L  + 
Sbjct: 233 ELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGL 367
            M  +G++P+E+T +  L +C+ L     G   HA  +K G +    FVG+A+VDMY   
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSS 426
            ++   ++    M      + WNA IAG+ +N+  +EA+  F  M  +     +  T + 
Sbjct: 352 KQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ++ AC    + +  E IH  +VK   + +  V ++L++ Y++ G  + A R+F ++   D
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKM------VVEG-----IRPTNSTFLAVLSACSHS 535
           +V+WN+MI  Y  +     A++L  KM      V +G     ++P + T + +L +C+  
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G+++    +K   +  + A  S +VD+  + G L+++      +P K     W  
Sbjct: 531 SALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588

Query: 596 LFAACRCHSD 605
           +  A   H +
Sbjct: 589 IIMAYGMHGN 598



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 15/336 (4%)

Query: 111 LESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDI 168
           LE +   +F I  VL  CS  E L  G+  HA   K     +  FV ++LV+MY  C  +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAI 227
            S   V   M    I   N ++AGY++N    +A   F+ + +   +  N  T + ++  
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C    A    + +H   +K        V N L+ MY + G ++ A  +F  +  R++++W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474

Query: 288 TAIINGFKQHGDYEKPLRLVCLMR-----------EDGIDPNEYTFTVALASCASLRNSH 336
             +I G+     +E  L L+  M+              + PN  T    L SCA+L    
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK  +A    VG+A+VDMY+  G +  ++K   ++ +  + ++WN  I  +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAY 593

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             +   +EAI+    M+      +E T+ S+  ACS
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           + +S S   W   +    R+    EA+  +  M+      D + + ++LKA + L  +  
Sbjct: 56  ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115

Query: 440 CEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
            +QIH+ + K  +   +V V ++L+  Y KCG +    +VF +++  + VSWNS+I +  
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH----SGLVQDGQKVFESMVKEYGI 554
              +   A+  F  M+ E + P++ T ++V++ACS+     GL+   Q      V  YG+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ------VHAYGL 229

Query: 555 LPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
              E +    + +V + G+ GKL  + + + +   +        L + C+    L+  E+
Sbjct: 230 RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289

Query: 612 ISKQILE-LDPDDAAVYVTL 630
           + + +LE ++PD+  +   L
Sbjct: 290 LREMVLEGVEPDEFTISSVL 309


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 200/614 (32%), Positives = 328/614 (53%), Gaps = 11/614 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+R   L+ GR  H ++ K  +  D +   SLV  YAK G ++    V   MP  D
Sbjct: 113 VVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRD 172

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I + N ++ GY  N L   A + F ++ D ++VQ +       LA C    +  +GK++H
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++        V  +LL MY KCG +  A SVF  +  R V++W  +I G+  +   +
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +       MR +G+     T    LA+CA   +S  G   H  V++R       + TA++
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MY  +G++  ++K   ++    + VSWN  IA +   +   EAI  F +++      D 
Sbjct: 353 EMYGKVGKVESSEKIFGKIANK-TLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT S+++ A  LL SL  C QIHS I+   +  N  + ++++  Y + G    +  +F +
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           + + DV+SWN+MI  Y+ +G+ + A+ +F++M   G++P  STF++VL+ACS SGLV +G
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEG 531

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
              F  M++EYG++P+  HY CM DLLGR G L   L FI ++PI PT+ +W  L  A R
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASR 591

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
             +D+ +AE+ +++I +L+ D+   Y+ LS+MYA+AG   D E  R LMK K + +    
Sbjct: 592 NQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPI 651

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY-------- 713
           S +E+++    F + + SHS+   ++E    L ++I++   T N+     +         
Sbjct: 652 SLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDDTRNQSYPVPVATRTTTMPN 711

Query: 714 -HSERLAVGFGLIS 726
            HS RLAV FGLIS
Sbjct: 712 KHSVRLAVVFGLIS 725



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 187/380 (49%), Gaps = 6/380 (1%)

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           + SLV   A  G +   V  +  +   D    N ++ G+A   L   A + +  +     
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P+ +T+  ++  C  L  +DEG+  H   +KL         N+L+  Y K G++EDAE 
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTV--ALASCAS 331
           VF+G+  R++++W  +++G+  +G     L L C     D ++    +  +  ALA+C  
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNG--LGSLALACFQEMHDALEVQHDSVGIIAALAACCL 221

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
             +S  G   H  VI+ G+     VGT+++DMY   GE+  A+     M    + V+WN 
Sbjct: 222 EFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATM-PLRTVVTWNC 280

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I G+  N++ +EA + F QM       +  T  ++L AC+   S      +H  +V+ +
Sbjct: 281 MIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ 340

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           F  +V + ++L+E Y K G  E +E++F ++    +VSWN+MI AY       +AI LF 
Sbjct: 341 FLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFL 400

Query: 512 KMVVEGIRPTNSTFLAVLSA 531
           +++ + + P   T   V+ A
Sbjct: 401 ELLNQPLYPDYFTMSTVVPA 420



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 167/346 (48%), Gaps = 7/346 (2%)

Query: 93  DGFIDDGCSNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA 147
           DG++ +G   ++ + C+     +LE   D   +I  L+ C  E     G+  H  + +  
Sbjct: 181 DGYVSNGL-GSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHG 239

Query: 148 VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL 207
           +  D  V  SL++MY KCG++    +V   MP   + + NC++ GYA N   D+AF  F+
Sbjct: 240 LEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFM 299

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           ++    +Q    T   +LA C    +   G+ +H   ++ Q+L    +  ALL MY K G
Sbjct: 300 QMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVG 359

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            +E +E +F  +  + ++SW  +I  +     Y + + L   +    + P+ +T +  + 
Sbjct: 360 KVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVP 419

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +   L +       H+ +I  G A    +  A++ MY+  G++  +++   +M  S   +
Sbjct: 420 AFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM-VSKDVI 478

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           SWN  I G+  + + + A+E F +M  N    +E T+ S+L ACS+
Sbjct: 479 SWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 5/206 (2%)

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N  I GF        A+ A+  M+ + A  D FT+  ++K C+ L  L      H  ++K
Sbjct: 76  NVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIK 135

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              E +V+  +SL+  Y K G  EDAERVF  +   D+V+WN M+  Y  NG    A+  
Sbjct: 136 LGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALAC 195

Query: 510 FEKM--VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           F++M   +E ++  +   +A L+AC        G+++   +++ +G+  +    + ++D+
Sbjct: 196 FQEMHDALE-VQHDSVGIIAALAACCLEFSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDM 253

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIW 593
             + G++  A    + +P++ T   W
Sbjct: 254 YCKCGEVAYARSVFATMPLR-TVVTW 278



 Score = 40.0 bits (92), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 5/129 (3%)

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL+ +    G  ++A    + +   D    N MI+ ++  G    A+  +  M+ +G RP
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC--MVDLLGRAGKLEIAL 578
              TF  V+  C+  G + +G+     MV + G+  E   Y+C  +V    + G +E A 
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAA-HGMVIKLGL--EHDVYTCNSLVAFYAKLGLVEDAE 162

Query: 579 IFISNLPIK 587
                +P++
Sbjct: 163 RVFDGMPVR 171


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/649 (30%), Positives = 350/649 (53%), Gaps = 30/649 (4%)

Query: 120 VIEVLSYCSR---EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ V++ CS     E L +G++ HA   +     + F+  +LV MY K G + S   ++ 
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                D+ + N +L+   +N    +A  +  ++    V+P+ +T S++L  C  L  +  
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320

Query: 237 GKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           GK+LHA  +K   L + + V +AL+ MY  C  +     VF+G+  R +  W A+I G+ 
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380

Query: 296 QHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q+   ++ L L   M E  G+  N  T    + +C            H  V+KRG+    
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-- 412
           FV   ++DMYS LG+I  A +   +M +    V+WN  I G+  ++  E+A+    +M  
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499

Query: 413 ---------VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
                     R     +  T  +IL +C+ L +LA  ++IH+  +K+   ++V VGS+L+
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF Q+   +V++WN +I AY  +G  ++AI L   M+V+G++P   
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF++V +ACSHSG+V +G ++F  M  +YG+ P   HY+C+VDLLGRAG+++ A   ++ 
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679

Query: 584 LPIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
           +P     A  W  L  A R H++L++ E  ++ +++L+P+ A+ YV L+N+Y+ AGL   
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           A E R+ MK + + KEPGCSWIE  +++++F + + SH +  K+   L+ L +++   G+
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799

Query: 703 T-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                       ++EKE  +  HSE+LA+ FG+++         ++ L 
Sbjct: 800 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 848



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 201/396 (50%), Gaps = 9/396 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           LL    ++ L  +A   ++ +  + ++P++Y +  +L     L  ++ GKQ+HA   K  
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 249 Y-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
           Y +    V+N L+ +Y KCG       VF+ + +RN +SW ++I+       +E  L   
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 308 CLMREDGIDPNEYTFTVALASCASL---RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
             M ++ ++P+ +T    + +C++L       MG   HA  +++G  L  F+   +V MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
             LG++  +K  L   G     V+WN  ++   +N++  EA+E   +MV      DEFT 
Sbjct: 247 GKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           SS+L ACS L  L T +++H+  +K+   + N  VGS+L++ Y  C       RVF  + 
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +  WN+MI  YSQN   ++A++LF  M    G+   ++T   V+ AC  SG     +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            +   +VK  G+  +    + ++D+  R GK++IA+
Sbjct: 426 AIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAM 460



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 239/490 (48%), Gaps = 21/490 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           +ELG++ HA + K     D    A +LVN+Y KCGD  ++  V  ++   +  S N L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL---SAIDEGKQLHAQTMKLQ 248
                  ++ A   F  +   +V+P+ +T  +++  C +L     +  GKQ+HA  ++  
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            L+ + + N L+ MY K G +  ++ +      R++++W  +++   Q+    + L  + 
Sbjct: 233 ELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGL 367
            M  +G++P+E+T +  L +C+ L     G   HA  +K G +    FVG+A+VDMY   
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSS 426
            ++   ++    M      + WNA IAG+ +N+  +EA+  F  M  +     +  T + 
Sbjct: 352 KQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ++ AC    + +  E IH  +VK   + +  V ++L++ Y++ G  + A R+F ++   D
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKM------VVEG-----IRPTNSTFLAVLSACSHS 535
           +V+WN+MI  Y  +     A++L  KM      V +G     ++P + T + +L +C+  
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G+++    +K   +  + A  S +VD+  + G L+++      +P K     W  
Sbjct: 531 SALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588

Query: 596 LFAACRCHSD 605
           +  A   H +
Sbjct: 589 IIMAYGMHGN 598



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 15/336 (4%)

Query: 111 LESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDI 168
           LE +   +F I  VL  CS  E L  G+  HA   K     +  FV ++LV+MY  C  +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAI 227
            S   V   M    I   N ++AGY++N    +A   F+ + +   +  N  T + ++  
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C    A    + +H   +K        V N L+ MY + G ++ A  +F  +  R++++W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474

Query: 288 TAIINGFKQHGDYEKPLRLVCLMR-----------EDGIDPNEYTFTVALASCASLRNSH 336
             +I G+     +E  L L+  M+              + PN  T    L SCA+L    
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK  +A    VG+A+VDMY+  G +  ++K   ++ +  + ++WN  I  +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAY 593

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             +   +EAI+    M+      +E T+ S+  ACS
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           + +S S   W   +    R+    EA+  +  M+      D + + ++LKA + L  +  
Sbjct: 56  ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115

Query: 440 CEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
            +QIH+ + K  +   +V V ++L+  Y KCG +    +VF +++  + VSWNS+I +  
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH----SGLVQDGQKVFESMVKEYGI 554
              +   A+  F  M+ E + P++ T ++V++ACS+     GL+   Q      V  YG+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ------VHAYGL 229

Query: 555 LPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
              E +    + +V + G+ GKL  + + + +   +        L + C+    L+  E+
Sbjct: 230 RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289

Query: 612 ISKQILE-LDPDDAAVYVTL 630
           + + +LE ++PD+  +   L
Sbjct: 290 LREMVLEGVEPDEFTISSVL 309


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 179/532 (33%), Positives = 307/532 (57%), Gaps = 13/532 (2%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           L+ DG  V  +  TY  +++ C  L +I   K++    +   +     V N +L M++KC
Sbjct: 109 LEHDGYGVGAS--TYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKC 166

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G+M DA  +F+ + +++V SW  ++ G    G++ +  RL   M ++  D    TF   +
Sbjct: 167 GLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMI 226

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            + A L    +G   H+  +KRG+    FV  A++DMYS  G I +A     +M +  ++
Sbjct: 227 RASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEK-TT 285

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V WN+ IA +  +  +EEA+  + +M  +    D FT S +++ C+ L SL   +Q H+ 
Sbjct: 286 VGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAA 345

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +V+  F +++   ++L++ Y+K G  EDA  VF+++   +V+SWN++I  Y  +G+ ++A
Sbjct: 346 LVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEA 405

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + +FE+M+ EG+ PT+ TFLAVLSACS+SGL Q G ++F SM +++ + P   HY+CM++
Sbjct: 406 VEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAMHYACMIE 465

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LLGR   L+ A   I   P KPTA +W  L  ACR H +L++ +  ++++  ++P+    
Sbjct: 466 LLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGMEPEKLCN 525

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           Y+ L N+Y  +G   +A    + +K K +   P CSW+EV  + Y F   +KSHS+  ++
Sbjct: 526 YIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKSHSQTKEI 585

Query: 687 YEKLKQLMQQIEDIGHTD---------NEKEDRVL-YHSERLAVGFGLISLP 728
           Y+K+  LM +I   G+ +         +E+E R+L YHSE+LA+ FGLI+ P
Sbjct: 586 YQKVDNLMVEICKHGYAEENETLLPDVDEEEQRILKYHSEKLAIAFGLINTP 637



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 113/207 (54%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +++G++ H+   K  V  D FV+ +L++MY+KCG I+    V  QMP       N ++A 
Sbjct: 235 VQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIAS 294

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA +   ++A S + ++       +H+T S ++ IC  L++++  KQ HA  ++  + + 
Sbjct: 295 YALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHGFATD 354

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              + AL+  Y K G MEDA  VF  +  +NVISW A+I G+  HG  ++ + +   M +
Sbjct: 355 IVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQ 414

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGY 339
           +G+ P   TF   L++C+    S  G+
Sbjct: 415 EGVTPTHVTFLAVLSACSYSGLSQRGW 441



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+R   LE  ++ HA + +     D     +LV+ Y+K G ++    V  +M + +
Sbjct: 326 VIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKN 385

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           + S N L+AGY  +    +A   F ++    V P H T+  +L+ C
Sbjct: 386 VISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431


>gi|297833250|ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330347|gb|EFH60766.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 676

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/589 (33%), Positives = 315/589 (53%), Gaps = 13/589 (2%)

Query: 123 VLSYCSREECLE-LGRRYHALITKTAVCGDQF----------VTASLVNMYAKCGDIKSM 171
           +LS C RE     LG   HA I K     D            V  SL+++Y KCG +   
Sbjct: 50  LLSICGREGWFPYLGPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKCGKLGDA 109

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + +  +MP  D+ S N +  G+ +N   +  F    ++ G     +  T + +L++C + 
Sbjct: 110 LKLFDEMPVRDVISQNIVFYGFLRNRETESGFVLLKRMLG-SGGFDQATLTIVLSVCDTP 168

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                 K +HA  +   Y  + +V N L+T Y KCG       VF  +  RNVI+WTA+I
Sbjct: 169 EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFSEMAHRNVITWTAVI 228

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G  ++  +E  LRL CLMR   + PN  T+  ALA+C+  +    G   HA + K G+ 
Sbjct: 229 SGLIENELHEDGLRLFCLMRRGLVHPNSVTYLSALAACSGSQMIVEGQQIHALLWKFGIE 288

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               + +A++DMYS  G I +A K + E  +    VS    + G  +N   EEAI+ F +
Sbjct: 289 SELCIESALMDMYSKCGSIEDAWK-IFESSQEVDEVSMTVILVGLAQNGSEEEAIQFFIR 347

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M++     D    S+IL    +  SL   +Q+HS ++K KF  N  V + LI  Y+KCG 
Sbjct: 348 MLQAGVEIDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMYSKCGD 407

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             D++ VF ++   + VSWNSMI A++++G    A+ L+E+M    ++PT+ TFL++L A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH GL+  G+++   M + +GI P   HY+C++D+LGRAG ++ A  FI +LP+KP   
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCK 527

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IW+ L  AC  H D ++ E+ ++Q+ E  PD +A ++ ++N+Y+  G   +  +  K MK
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFETAPDSSAAHILMANIYSSRGKWKERAKTIKRMK 587

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
              ++KE G SWIE+  K + F  ++K H +   +Y+ L  L     D+
Sbjct: 588 EMGVTKETGISWIEMEKKTHSFVVEDKMHPQAEAIYDVLSGLFPVTVDL 636



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 179/390 (45%), Gaps = 34/390 (8%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF++ P R  +S  +++F G++              RN     GF+           
Sbjct: 109 ALKLFDEMPVRDVIS-QNIVFYGFL--------------RNRETESGFV----------- 142

Query: 108 CYSLESLL-----DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY 162
              L+ +L     D+  +  VLS C   E   + +  HAL   +    +  V   L+  Y
Sbjct: 143 --LLKRMLGSGGFDQATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSY 200

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
            KCG   S   V  +M + ++ +   +++G  +N L +     F  +    V PN  TY 
Sbjct: 201 FKCGCSVSGRWVFSEMAHRNVITWTAVISGLIENELHEDGLRLFCLMRRGLVHPNSVTYL 260

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           + LA C     I EG+Q+HA   K    S+  + +AL+ MY KCG +EDA  +FE   + 
Sbjct: 261 SALAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQEV 320

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           + +S T I+ G  Q+G  E+ ++    M + G++ +    +  L       +  +G   H
Sbjct: 321 DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQLH 380

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           + VIKR      FV   +++MYS  G++ +++   + M K  + VSWN+ IA F R+   
Sbjct: 381 SLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKR-NYVSWNSMIAAFARHGHG 439

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             A++ + +M   +    + T+ S+L ACS
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHACS 469



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 144/298 (48%), Gaps = 11/298 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L+ CS  + +  G++ HAL+ K  +  +  + ++L++MY+KCG I+    + +    
Sbjct: 260 LSALAACSGSQMIVEGQQIHALLWKFGIESELCIESALMDMYSKCGSIEDAWKIFESSQE 319

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           +D  S   +L G A+N   ++A  FF+++    V+ +    S +L +    +++  GKQL
Sbjct: 320 VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAILGVSFVDNSLGLGKQL 379

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H+  +K ++   T V+N L+ MY KCG + D+++VF  + +RN +SW ++I  F +HG  
Sbjct: 380 HSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHG 439

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG--- 357
              L+L   M    + P + TF   L +C     SH+G +   + +   M     +    
Sbjct: 440 LAALKLYEEMTTLEVKPTDVTFLSLLHAC-----SHVGLIDKGRELLNEMKEVHGIKPRT 494

Query: 358 ---TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              T I+DM    G + EAK  +  +        W A +     +  TE    A  Q+
Sbjct: 495 EHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQL 552



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  +L     +  L LG++ H+L+ K   CG+ FV   L+NMY+KCGD+     V
Sbjct: 355 IDANVVSAILGVSFVDNSLGLGKQLHSLVIKRKFCGNTFVNNGLINMYSKCGDLTDSQTV 414

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            ++MP  +  S N ++A +A++     A   + ++  ++V+P   T+ ++L  C  +  I
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474

Query: 235 DEGKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           D+G++L  +  ++  +  +T     ++ M  + G+M++A+S  + L ++ +   W A++ 
Sbjct: 475 DKGRELLNEMKEVHGIKPRTEHYTCIIDMLGRAGLMKEAKSFIDSLPLKPDCKIWQALLG 534

Query: 293 GFKQHGDYE 301
               HGD E
Sbjct: 535 ACSFHGDTE 543


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 194/589 (32%), Positives = 324/589 (55%), Gaps = 18/589 (3%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
            C  LG +  +L  K+ +  + F  ++L++MYAKCG ++    V   MP  +  S N L+
Sbjct: 105 RCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALI 164

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-----QLHAQTM 245
           AGY ++    QA   F+ ++   + P+  T++ +L      +A D+       QLH + +
Sbjct: 165 AGYVESGKVLQALELFINMETERLVPDEATFAALL------TAFDDSNYFLMHQLHGKIV 218

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHG-DYEKP 303
           K        VSNA +T Y +CG + ++  +F+ +   R++ISW A++  +  HG DY+  
Sbjct: 219 KYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAM 278

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
              V ++RE G+  + Y+FT  +++C    + H G   H  VIK G+     V  A++ M
Sbjct: 279 GFFVRMIRESGVQLDMYSFTSIISTCPE-HDDHQGRAIHGLVIKNGLEGATPVCNALIAM 337

Query: 364 Y---SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           Y   SG   + +A K    +     +VSWN+ + G+ ++  + +A+  F  M   +  CD
Sbjct: 338 YTRISGNCMMEDACKCFDSL-LIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCD 396

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           E+ +S+ L++CS L  L    QIH  I+ S F SN  V SSLI  Y+K G  +DA++ F 
Sbjct: 397 EYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFE 456

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +      V WNSMI  Y+Q+G A     LF +MV   +   + TF+ ++++CSH+GLV +
Sbjct: 457 EADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDE 516

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G ++  +M   YGI     HY+C VDL GRAG+LE A   I ++P +P A +W  L  AC
Sbjct: 517 GSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGAC 576

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H ++++A  ++  +L  +P   + Y+ LS+MY+  G+ +D    ++ MK + +SK PG
Sbjct: 577 RIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPG 636

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKED 709
            SWIEV N+++ F ++++SH  M ++YE L  L+Q  +     ++E+ D
Sbjct: 637 WSWIEVKNEVHSFNAEDRSHPRMDEIYEMLSLLLQVAKMCSSCEDEETD 685



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 214/485 (44%), Gaps = 9/485 (1%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  ++P  D AS N LL  +        A+     +    V  N +   + L    +   
Sbjct: 47  VFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARC 106

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G QL +   K         ++ALL MY KCG + DA  VF+G+ +RN +SW A+I G
Sbjct: 107 PALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAG 166

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + + G   + L L   M  + + P+E TF  AL +     N  + +  H +++K G ALG
Sbjct: 167 YVESGKVLQALELFINMETERLVPDEATFA-ALLTAFDDSNYFLMHQLHGKIVKYGSALG 225

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             V  A +  YS  G + E+++   ++G S   +SWNA +  +  +    +A+  F +M+
Sbjct: 226 LTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMI 285

Query: 414 RNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS- 471
           R      D ++++SI+  C           IH  ++K+  E    V ++LI  Y +    
Sbjct: 286 RESGVQLDMYSFTSIISTCPEHDD-HQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGN 344

Query: 472 --WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
              EDA + F  L   D VSWNSM+  YSQ+  +  A+  F  M    IR     F A L
Sbjct: 345 CMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAAL 404

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            +CS   ++Q G+++  S++   G        S ++ +  ++G L+ A           +
Sbjct: 405 RSCSELAVLQLGRQIHGSIIHS-GFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSS 463

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRK 648
            P W  +      H    +   +  +++EL  P D   +V L    + AGL  +  E   
Sbjct: 464 VP-WNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILN 522

Query: 649 LMKMK 653
            M+ +
Sbjct: 523 AMETR 527



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           HA  +K   +S T   N LLT Y    + +  A  VF+ + + +  SW +++      G 
Sbjct: 13  HATLLKSCIISPTRW-NQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGA 71

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +     L+  M   G+  N +    +L S A+ R   +G    +   K G+A   F  +A
Sbjct: 72  HPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASA 131

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ MY+  G + +A++    M +  ++VSWNA IAG+  + K  +A+E F  M       
Sbjct: 132 LLHMYAKCGRVRDARRVFDGMPER-NTVSWNALIAGYVESGKVLQALELFINMETERLVP 190

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           DE T++++L A     +     Q+H +IVK      + V ++ I AY++CG+  ++ R+F
Sbjct: 191 DEATFAALLTAFD-DSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIF 249

Query: 480 SQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSAC 532
            Q+  + D++SWN+M+ AY+ +G    A+  F +M+ E G++    +F +++S C
Sbjct: 250 DQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTC 304



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 12/223 (5%)

Query: 82  NGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHA 141
            GYS  N S  D      C  +  + C       D+      L  CS    L+LGR+ H 
Sbjct: 370 TGYSQHNLS-ADALRFFRCMQSANIRC-------DEYAFSAALRSCSELAVLQLGRQIHG 421

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
            I  +    + FV++SL+ MY+K G +       ++         N ++ GYA++     
Sbjct: 422 SIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHI 481

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL-- 259
             S F ++  + V  +H T+  ++  C     +DEG ++    M+ +Y     + +    
Sbjct: 482 VHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEI-LNAMETRYGIPLRMEHYACG 540

Query: 260 LTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
           + +Y + G +E A+ + + +  + + + W  ++   + HG+ E
Sbjct: 541 VDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNME 583


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 199/649 (30%), Positives = 350/649 (53%), Gaps = 30/649 (4%)

Query: 120 VIEVLSYCSR---EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ V++ CS     E L +G++ HA   +     + F+  +LV MY K G + S   ++ 
Sbjct: 115 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLG 173

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                D+ + N +L+   +N    +A  +  ++    V+P+ +T S++L  C  L  +  
Sbjct: 174 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 233

Query: 237 GKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           GK+LHA  +K   L + + V +AL+ MY  C  +     VF+G+  R +  W A+I G+ 
Sbjct: 234 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 293

Query: 296 QHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q+   ++ L L   M E  G+  N  T    + +C            H  V+KRG+    
Sbjct: 294 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 353

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-- 412
           FV   ++DMYS LG+I  A +   +M +    V+WN  I G+  ++  E+A+    +M  
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 412

Query: 413 ---------VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
                     R     +  T  +IL +C+ L +LA  ++IH+  +K+   ++V VGS+L+
Sbjct: 413 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 472

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF Q+   +V++WN +I AY  +G  ++AI L   M+V+G++P   
Sbjct: 473 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 532

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF++V +ACSHSG+V +G ++F  M  +YG+ P   HY+C+VDLLGRAG+++ A   ++ 
Sbjct: 533 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 592

Query: 584 LPIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
           +P     A  W  L  A R H++L++ E  ++ +++L+P+ A+ YV L+N+Y+ AGL   
Sbjct: 593 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 652

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           A E R+ MK + + KEPGCSWIE  +++++F + + SH +  K+   L+ L +++   G+
Sbjct: 653 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 712

Query: 703 T-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                       ++EKE  +  HSE+LA+ FG+++         ++ L 
Sbjct: 713 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 761



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 191/373 (51%), Gaps = 9/373 (2%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMME 270
           + ++P++Y +  +L     L  ++ GKQ+HA   K  Y +    V+N L+ +Y KCG   
Sbjct: 4   LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
               VF+ + +RN +SW ++I+       +E  L     M ++ ++P+ +T    + +C+
Sbjct: 64  AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123

Query: 331 SL---RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +L       MG   HA  +++G  L  F+   +V MY  LG++  +K  L   G     V
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDLV 181

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +WN  ++   +N++  EA+E   +MV      DEFT SS+L ACS L  L T +++H+  
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241

Query: 448 VKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +K+   + N  VGS+L++ Y  C       RVF  +    +  WN+MI  YSQN   ++A
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301

Query: 507 IILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           ++LF  M    G+   ++T   V+ AC  SG     + +   +VK  G+  +    + ++
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLM 360

Query: 566 DLLGRAGKLEIAL 578
           D+  R GK++IA+
Sbjct: 361 DMYSRLGKIDIAM 373



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 239/490 (48%), Gaps = 21/490 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           +ELG++ HA + K     D    A +LVN+Y KCGD  ++  V  ++   +  S N L++
Sbjct: 26  MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 85

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL---SAIDEGKQLHAQTMKLQ 248
                  ++ A   F  +   +V+P+ +T  +++  C +L     +  GKQ+HA  ++  
Sbjct: 86  SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 145

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            L+ + + N L+ MY K G +  ++ +      R++++W  +++   Q+    + L  + 
Sbjct: 146 ELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 204

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGL 367
            M  +G++P+E+T +  L +C+ L     G   HA  +K G +    FVG+A+VDMY   
Sbjct: 205 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 264

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSS 426
            ++   ++    M      + WNA IAG+ +N+  +EA+  F  M  +     +  T + 
Sbjct: 265 KQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 323

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           ++ AC    + +  E IH  +VK   + +  V ++L++ Y++ G  + A R+F ++   D
Sbjct: 324 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 383

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKM------VVEG-----IRPTNSTFLAVLSACSHS 535
           +V+WN+MI  Y  +     A++L  KM      V +G     ++P + T + +L +C+  
Sbjct: 384 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 443

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             +  G+++    +K   +  + A  S +VD+  + G L+++      +P K     W  
Sbjct: 444 SALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 501

Query: 596 LFAACRCHSD 605
           +  A   H +
Sbjct: 502 IIMAYGMHGN 511



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 15/336 (4%)

Query: 111 LESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDI 168
           LE +   +F I  VL  CS  E L  G+  HA   K     +  FV ++LV+MY  C  +
Sbjct: 208 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 267

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAI 227
            S   V   M    I   N ++AGY++N    +A   F+ + +   +  N  T + ++  
Sbjct: 268 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 327

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C    A    + +H   +K        V N L+ MY + G ++ A  +F  +  R++++W
Sbjct: 328 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 387

Query: 288 TAIINGFKQHGDYEKPLRLVCLMR-----------EDGIDPNEYTFTVALASCASLRNSH 336
             +I G+     +E  L L+  M+              + PN  T    L SCA+L    
Sbjct: 388 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 447

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK  +A    VG+A+VDMY+  G +  ++K   ++ +  + ++WN  I  +
Sbjct: 448 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAY 506

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             +   +EAI+    M+      +E T+ S+  ACS
Sbjct: 507 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 542



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 111/220 (50%), Gaps = 15/220 (6%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERV 478
           D + + ++LKA + L  +   +QIH+ + K  +   +V V ++L+  Y KCG +    +V
Sbjct: 9   DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH---- 534
           F +++  + VSWNS+I +     +   A+  F  M+ E + P++ T ++V++ACS+    
Sbjct: 69  FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 128

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            GL+   Q      V  YG+   E +    + +V + G+ GKL  + + + +   +    
Sbjct: 129 EGLMMGKQ------VHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILE-LDPDDAAVYVTL 630
               L + C+    L+  E++ + +LE ++PD+  +   L
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 222


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 203/607 (33%), Positives = 324/607 (53%), Gaps = 16/607 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LG+  HA + + A   D     +L+ +Y KCG +     V   MP  +  S N L++G
Sbjct: 32  LSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA +     A +    L   D   N Y  S+ +A    + + D G+Q H   +K      
Sbjct: 91  YASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEH 147

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V +A+L MY +C  M++A  VF+ +   NV ++ ++INGF   G  +    +V  M  
Sbjct: 148 PYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVR 207

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +    +  ++   L  CAS +   +G   H Q +KR + L  +VG+A+VDMY       E
Sbjct: 208 NVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHE 267

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A +   E+    + VSW A +  + +N+  E+A++ F  M       +EFTY+  L +C+
Sbjct: 268 ANRVF-EVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 326

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +L     + +  +K+     + V ++L+  Y+K GS EDA RVF  +   DVVSWNS
Sbjct: 327 GLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNS 386

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +I  Y+ +GRAR+A+  F  M+     P+  TF+ VLSAC+  GLV +G      M+KE 
Sbjct: 387 IIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEV 446

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G+ P + HY+CMV LL R G+L+ A  FI +  I      WR L ++C+ + +  +   +
Sbjct: 447 GVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRV 506

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++QI +L P D   YV LSNMYA+A       + R+LM+   + KEPG SWI+V ++++ 
Sbjct: 507 AEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSEVHV 566

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F S++K H  M ++ +KL++L+ +I+ IG+            D +KE+ ++YHSE+LA+ 
Sbjct: 567 FTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKLALA 626

Query: 722 FGLISLP 728
           FGLI  P
Sbjct: 627 FGLIRTP 633


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 185/620 (29%), Positives = 326/620 (52%), Gaps = 45/620 (7%)

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           GD +    +   +P  D  +C+ L++ +    L ++A   +  L    ++P++  + T+ 
Sbjct: 80  GDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVA 139

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             CG+       K++H   ++   +S   + NAL+  Y KC  +E A  VF+ LV ++V+
Sbjct: 140 KACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVV 199

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWT++ + +   G     L + C M  +G+ PN  T +  L +C+ L++   G   H   
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAK------------------------------- 374
           ++ GM    FV +A+V +Y+    + +A+                               
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319

Query: 375 ---KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
               Q+   G  A   +WNA I G   N +TE+A+E   +M       ++ T SS L AC
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPAC 379

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S+L SL   +++H  + +     ++   ++L+  Y KCG    +  VF  +   DVV+WN
Sbjct: 380 SILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWN 439

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +MI A + +G  R+ ++LFE M+  GI+P + TF  VLS CSHS LV++G ++F SM ++
Sbjct: 440 TMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRD 499

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           + + P+  HY+CMVD+  RAG+L  A  FI  +P++PTA  W  L  ACR + ++++A+ 
Sbjct: 500 HLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKI 559

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            + ++ E++P++   YV+L N+   A L ++A E R LMK + I+K PGCSW++V ++++
Sbjct: 560 SANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVH 619

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TD--------NEKEDRVLYHSERLAV 720
            F   +K++ E  K+Y  L +L ++++  G+   TD         EK + +  HSE+LAV
Sbjct: 620 TFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAV 679

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FG+++L  ++     + L 
Sbjct: 680 AFGILNLNGQSSIRVFKNLR 699



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 140/319 (43%), Gaps = 58/319 (18%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS  + L+ GR  H    +  +  + FV ++LV++YA+C  +K    V   MP+ D
Sbjct: 239 ILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRD 298

Query: 183 IASCNCLLAGYAKNALFDQAFSFF-----------------------------------L 207
           + S N +L  Y  N  +D+  + F                                    
Sbjct: 299 VVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLR 358

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           K+  +  +PN  T S+ L  C  L ++  GK++H    +   +       AL+ MY KCG
Sbjct: 359 KMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCG 418

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            +  + +VF+ + +++V++W  +I     HG+  + L L   M + GI PN  TFT  L+
Sbjct: 419 DLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVG------------TAIVDMYSGLGEIWEAKK 375
            C+           H+++++ G+ + + +G              +VD++S  G + EA +
Sbjct: 479 GCS-----------HSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYE 527

Query: 376 QLKEMGKSASSVSWNAQIA 394
            ++ M    ++ +W A + 
Sbjct: 528 FIQRMPMEPTASAWGALLG 546



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/423 (22%), Positives = 176/423 (41%), Gaps = 74/423 (17%)

Query: 149 CG---DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
           CG   D F+  +L++ Y KC  ++    V   +   D+ S   + + Y    L     + 
Sbjct: 161 CGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAV 220

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           F ++    V+PN  T S++L  C  L  +  G+ +H   ++   +    V +AL+++Y +
Sbjct: 221 FCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYAR 280

Query: 266 CGMMEDAESVFEGLVQRNVIS-----------------------------------WTAI 290
           C  ++ A  VF+ +  R+V+S                                   W A+
Sbjct: 281 CLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAV 340

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G  ++G  EK + ++  M+  G  PN+ T +  L +C+ L +  MG   H  V +  +
Sbjct: 341 IGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWL 400

Query: 351 ALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +GD    TA+V MY+  G++    + + +M      V+WN  I     +    E +  F
Sbjct: 401 -IGDLTTMTALVYMYAKCGDL-NLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLF 458

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M+++    +  T++ +L  CS           HSR+V+             ++ +N  
Sbjct: 459 ESMLQSGIKPNSVTFTGVLSGCS-----------HSRLVEEG-----------LQIFNSM 496

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G           L   D   +  M+  +S+ GR  +A    ++M +E   PT S + A+L
Sbjct: 497 GR--------DHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPME---PTASAWGALL 545

Query: 530 SAC 532
            AC
Sbjct: 546 GAC 548



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 3/149 (2%)

Query: 441 EQIHSRIVKSKFESNV--HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
           +Q+ S  V     +N+  H+G  L++A    G +  A+++F  +   D  + +++I A++
Sbjct: 49  KQLTSTKVAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFT 108

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
             G   +AI L+  +   GI+P NS FL V  AC  SG     ++V +  ++  G++ + 
Sbjct: 109 TRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIR-CGMMSDA 167

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIK 587
              + ++   G+   +E A     +L +K
Sbjct: 168 FLGNALIHAYGKCKCVEGARRVFDDLVVK 196



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 2/180 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS  E L +G+  H  + +  + GD     +LV MYAKCGD+     V   +   D+
Sbjct: 376 LPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDV 435

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N ++   A +    +    F  +    ++PN  T++ +L+ C     ++EG Q+   
Sbjct: 436 VAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNS 495

Query: 244 TMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
             +   +   A   A ++ ++ + G + +A    + + ++    +W A++   + + + E
Sbjct: 496 MGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVE 555


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 202/627 (32%), Positives = 333/627 (53%), Gaps = 19/627 (3%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E  ++  + + +L  C+++  +   +  HA I KT    D  V  SLVN+YAKCG + + 
Sbjct: 69  EKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNA 128

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             +   +   ++ +   L+ GY +N+  + A   F  +      P++YT    L  C ++
Sbjct: 129 RKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAI 188

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           ++I  GKQLHA  +K +     ++ NAL ++Y K G ++ + +VF+ + ++NVISWTA+I
Sbjct: 189 NSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVI 248

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +   ++G     LR    M  + I PNE+T T  L+ C       +G + H+  IK G  
Sbjct: 249 SACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQ 308

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF----------FRNQK 401
               +  +I+ +Y   G + EA+    +MG S + V+WNA I+G           F  Q+
Sbjct: 309 YNLRITNSIMYLYLKCGHMDEAQILFHKMG-STNLVTWNAMISGHAQAMDLAKDDFSAQR 367

Query: 402 TE-EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +  EA+  F ++ R     D FT SS+L  CS L +L   EQ+H++ +KS + S+V VG+
Sbjct: 368 SGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGT 427

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L+  Y+KCGS   A + F +++   ++SW +MI   +Q+G + +A+ LFE M + G+RP
Sbjct: 428 ALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRP 487

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              TF+ VL+AC HSG+V +    FE M KEY I P   HY C++ +  +  +L+ A   
Sbjct: 488 NQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDI 547

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I+ +  +P+  IW  L A CR     ++  + ++Q+L+L   D   YVTL NMY  A   
Sbjct: 548 INKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRW 607

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            D    RKLMK +++ K    SWI +  KI+ F +  + H    K+YE L++L+ + +  
Sbjct: 608 QDVSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAKGS 667

Query: 701 GHTDNEKEDRVLYHSERLAVGFGLISL 727
           G+   +       H E L V F  IS+
Sbjct: 668 GYQSTQ-------HMEILDVNFYDISV 687



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 122/246 (49%), Gaps = 5/246 (2%)

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           S N Q+ G     K  E  EA    ++ +   +   Y  +L+ C+   S++  + IH+ I
Sbjct: 42  SINTQLDGSLEPIKPLEFHEALC-FIKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHI 100

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           +K+    ++ V +SL+  Y KCG+  +A ++F  L   +VV+W +++  Y QN +   AI
Sbjct: 101 IKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAI 160

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            +F+ M+  G  P+N T    L+ACS    ++ G+++   ++K Y +  + +  + +  L
Sbjct: 161 DVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIK-YKLDYDPSIGNALCSL 219

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAA 625
             + G L+ ++    ++  K     W  + +AC  +    M   F ++ +LE + P++  
Sbjct: 220 YSKLGSLDSSINVFQSIGEKNVIS-WTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFT 278

Query: 626 VYVTLS 631
           +   LS
Sbjct: 279 LTTVLS 284


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 205/621 (33%), Positives = 326/621 (52%), Gaps = 17/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L  GR  HA      +  D FV+ +L+++Y +C        V  +MP  D
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + + N +LAGYA + ++  A +  L + D   ++PN  T  ++L +     A+ +G  +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 242 AQTMKL---QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           A  ++    Q   +  +  ALL MY KC  +  A  VF G+  RN ++W+A+I GF    
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 299 DYEKPLRLVCLMREDGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
              +   L   M  +G+   +  +   AL  CASL + HMG   HA + K G+       
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++ MY+  G I EA     E+     ++S+ A ++G  +N K EEA   F +M   + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S++ ACS L +L   +  H  ++         + +SLI+ Y KCG  + + +
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++ A DVVSWN+MI  Y  +G  ++A  LF  M  +G  P + TF+ +++ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G+  F++M  +YGILP   HY CMVDLL R G L+ A  FI ++P+K    +W  L 
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H ++ + + +S+ I +L P+    +V LSN+++ AG   +A E R + K+K   K
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---------- 707
            PG SWIE+   ++ F   ++SH     +Y +L  +M  I+ +G+  +            
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 708 -EDRVLYHSERLAVGFGLISL 727
            E  +LYHSE+LA+ FG++SL
Sbjct: 705 KEKALLYHSEKLAIAFGVLSL 725



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 222/487 (45%), Gaps = 11/487 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  ++P  D  + N L+  Y+    F  A   +  +    V PN YT+  +L  C +L  
Sbjct: 56  VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G+ +HA        +   VS AL+ +YI+C     A +VF  +  R+V++W A++ G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175

Query: 294 FKQHGDYEKPL-RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           +  HG Y   +  L+ +    G+ PN  T    L   A       G   HA  ++  +  
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235

Query: 353 GD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +    +GTA++DMY+   ++  A +    M    + V+W+A I GF    +  EA   F
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAFNLF 294

Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             M V         + +S L+ C+ L  L    Q+H+ I KS   +++   +SL+  Y K
Sbjct: 295 KDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAK 354

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G   +A   F ++   D +S+ +++    QNG+A +A ++F+KM    + P  +T +++
Sbjct: 355 AGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           + ACSH   +Q G+    S++   G+  E +  + ++D+  + GK++++      +P + 
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIR-GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARD 473

Query: 589 TAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
               W  + A    H   K A   F+  +     PDD   ++ L    + +GL  + +  
Sbjct: 474 VVS-WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDD-VTFICLIAACSHSGLVTEGKHW 531

Query: 647 RKLMKMK 653
              M  K
Sbjct: 532 FDTMTHK 538



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 32/353 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC++F+  P R  ++ S LI  G++  +    + N        F D  ++  C       
Sbjct: 259 ACRVFHGMPVRNDVTWSALI-GGFVLCDRMTEAFN-------LFKDMLVEGLC------- 303

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                  L    V   L  C+    L +G + HALI K+ +  D   + SL++MYAK G 
Sbjct: 304 ------FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I        ++   D  S   LL+G  +N   ++AF  F K+   +++P+  T  +++  
Sbjct: 358 INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C  L+A+  GK  H   +      +T++ N+L+ MY KCG ++ +  VF+ +  R+V+SW
Sbjct: 418 CSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSW 477

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMF 341
             +I G+  HG  ++   L   M+  G  P++ TF   +A+C     SH G      + F
Sbjct: 478 NTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC-----SHSGLVTEGKHWF 532

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
                K G+         +VD+ +  G + EA + ++ M   A    W A + 
Sbjct: 533 DTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLG 585



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 178/392 (45%), Gaps = 18/392 (4%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  +I  G +  A  VF+ +   +  ++ A+I  +   G +   + L   M    + PN+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           YTF   L +C++L +   G   HA     G+    FV TA++D+Y        A+    +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-----VRNDAACDEFTYSSILKACSLL 434
           M      V+WNA +AG+  +     AI     M     +R +A+    T  S+L   +  
Sbjct: 161 M-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS----TLVSLLPLLAQH 215

Query: 435 PSLATCEQIHSRIVKSKFESN---VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            +L     IH+  +++  E N   V +G++L++ Y KC     A RVF  +   + V+W+
Sbjct: 216 GALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVK 550
           ++I  +    R  +A  LF+ M+VEG+   ++T +A  L  C+    +  G ++  +++ 
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL-HALIA 334

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           + GI  +    + ++ +  +AG +  A +F   + +K T   +  L + C  +   + A 
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAF 393

Query: 611 FISK--QILELDPDDAAVYVTLSNMYAEAGLQ 640
            + K  Q   ++PD A +   +      A LQ
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQ 425


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/583 (32%), Positives = 322/583 (55%), Gaps = 2/583 (0%)

Query: 121  IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
            + VL  C     L+LGR+ H +  K  +  D FV  ++++MY+K G I    A+   +P 
Sbjct: 429  VSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPV 488

Query: 181  LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             D  S N L+ G A N    +A +   ++    +  +  +++T +  C ++ AI+ GKQ+
Sbjct: 489  KDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQI 548

Query: 241  HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
            H+ ++K    S  AV ++L+ +Y K G +E +  V   +   +++   A+I G  Q+   
Sbjct: 549  HSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNRE 608

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTA 359
            ++ + L   + +DG  P+ +TFT  L+ C    +S +G   H   +K  +   D  +G +
Sbjct: 609  DEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGIS 668

Query: 360  IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
            +V +Y     + +A K L+E+    + V W A I+G+ +N  + +++  F +M   D   
Sbjct: 669  LVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRS 728

Query: 420  DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            DE T++S+LKACS + +L   ++IH  IVKS F S     S+L++ Y+KCG    +  +F
Sbjct: 729  DEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIF 788

Query: 480  SQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
             +L    +++ WNSMI  +++NG A +A++LF+KM    I+P + T L VL ACSH+GL+
Sbjct: 789  KELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLI 848

Query: 539  QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             +G   F+SM + YGI+P   HY+C++DLLGR G L+ A   I  LP +    IW    A
Sbjct: 849  SEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLA 908

Query: 599  ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
            AC+ H D +  +  +K+++E++P  ++ YV LS+++A AG   +A+  R+ M+ K + K 
Sbjct: 909  ACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKF 968

Query: 659  PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            PGCSWI V NK   F  Q+  H +   +Y+ L  L   +   G
Sbjct: 969  PGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDG 1011



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 223/405 (55%), Gaps = 6/405 (1%)

Query: 134 ELGRRYHAL-----ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
            +GR   AL     + K     DQ    ++++  A  G +     ++K++      + N 
Sbjct: 235 RVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNA 294

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           ++A Y+++ L  + F  +  +    + P   T++++L+   +++A DEG+Q+HA  +K  
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
             +   V ++L+ +Y+K G + DA+ VF+   ++N++ W AI+ GF Q+   E+ +++  
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MR   ++ +++TF   L +C +L +  +G   H   IK GM    FV  A++DMYS LG
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            I +  K L  +     SVSWNA I G   N++  EAI    +M     A DE ++++ +
Sbjct: 475 AI-DVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAI 533

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS + ++ T +QIHS  +K    SN  VGSSLI+ Y+K G  E + +V + + A+ +V
Sbjct: 534 NACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIV 593

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
             N++I    QN R  +AI LF++++ +G +P+N TF ++LS C+
Sbjct: 594 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCT 638



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 261/512 (50%), Gaps = 6/512 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS  +     + GR+ HA   K  +  + FV +SL+N+Y K G I     V       +
Sbjct: 330 ILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 389

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I   N +L G+ +N L ++    F  +   D++ + +T+ ++L  C +L ++D G+Q+H 
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+K    +   V+NA+L MY K G ++ A+++F  +  ++ +SW A+I G   + +  +
Sbjct: 450 ITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGE 509

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + ++  M+  GI  +E +F  A+ +C+++     G   H+  IK  +     VG++++D
Sbjct: 510 AINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLID 569

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +YS  G++  ++K L  +  S S V  NA I G  +N + +EAIE F Q++++      F
Sbjct: 570 LYSKFGDVESSRKVLAHVDAS-SIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNF 628

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T++SIL  C+   S    +Q+H   +KS     +  +G SL+  Y KC   EDA ++  +
Sbjct: 629 TFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEE 688

Query: 482 L-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +    ++V W + I  Y+QNG + +++++F +M    +R   +TF +VL ACS    + D
Sbjct: 689 VPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTD 748

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA-- 598
           G+++   +VK  G +  E   S ++D+  + G +  +      L  +     W  +    
Sbjct: 749 GKEIHGLIVKS-GFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGF 807

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           A   +++  +  F   Q  ++ PDD  +   L
Sbjct: 808 AKNGYANEALLLFQKMQESQIKPDDVTLLGVL 839



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 235/483 (48%), Gaps = 37/483 (7%)

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           S+ S  D+  +  VLS CSR   LE GR+ H  + K+  C   F  A LV+MYAKCG++ 
Sbjct: 150 SIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVD 209

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               +   +   D      ++AGY +   + QA + F +++ +   P+  T  T+++   
Sbjct: 210 DARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLA 269

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+                                   G + DA ++ + +   + ++W A
Sbjct: 270 SM-----------------------------------GRLGDARTLLKRIRMTSTVAWNA 294

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I  + Q G   +   L   M++ G+ P   TF   L++ A++     G   HA  +K G
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +    FVG++++++Y   G I +AKK   +     + V WNA + GF +N+  EE I+ F
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMWNAILYGFVQNELQEETIQMF 413

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M R D   D+FT+ S+L AC  L SL    Q+H   +K+  ++++ V +++++ Y+K 
Sbjct: 414 QYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKL 473

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G+ + A+ +FS +   D VSWN++I   + N    +AI + ++M   GI     +F   +
Sbjct: 474 GAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAI 533

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACS+   ++ G+++  + +K Y +    A  S ++DL  + G +E +   ++++     
Sbjct: 534 NACSNIWAIETGKQIHSASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSI 592

Query: 590 API 592
            PI
Sbjct: 593 VPI 595



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 222/447 (49%), Gaps = 10/447 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+      ++ CS    +E G++ H+   K  VC +  V +SL+++Y+K GD++S   V
Sbjct: 524 LDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 583

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           +  +    I   N L+ G  +N   D+A   F ++     +P+++T++++L+ C    + 
Sbjct: 584 LAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSS 643

Query: 235 DEGKQLHAQTMKLQYLSK-TAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIIN 292
             GKQ+H  T+K   L++ T++  +L+ +Y+KC ++EDA  + E +   +N++ WTA I+
Sbjct: 644 VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ Q+G   + L +   MR   +  +E TFT  L +C+ +     G   H  ++K G   
Sbjct: 704 GYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVS 763

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            +   +A++DMYS  G++  + +  KE+    + + WN+ I GF +N    EA+  F +M
Sbjct: 764 YETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKM 823

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES---NVHVGSSLIEAYNKC 469
             +    D+ T   +L ACS    ++  E +H     S+       V   + LI+   + 
Sbjct: 824 QESQIKPDDVTLLGVLIACSHAGLIS--EGLHFFDSMSQVYGIVPRVDHYACLIDLLGRG 881

Query: 470 GSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           G  + A+ V  QL   AD V W + + A   +    +  +  +K+V   + P +S+    
Sbjct: 882 GHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLV--EMEPQSSSTYVF 939

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGIL 555
           LS+   +       KV    ++E G++
Sbjct: 940 LSSLHAAAGNWVEAKVAREAMREKGVM 966



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 185/388 (47%), Gaps = 38/388 (9%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           I   P+ +  + +L+ C  L A++ G+Q+H   +K  + S       L+ MY KCG ++D
Sbjct: 151 IGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDD 210

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  +F+G+   + I WT++I G+ + G Y++ L L   M + G  P++ T    +++ AS
Sbjct: 211 ARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLAS 270

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           +                                   G + +A+  LK + +  S+V+WNA
Sbjct: 271 M-----------------------------------GRLGDARTLLKRI-RMTSTVAWNA 294

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IA + ++    E    +  M +        T++SIL A + + +     QIH+  VK  
Sbjct: 295 VIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHG 354

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            ++NV VGSSLI  Y K G   DA++VF   T  ++V WN+++  + QN    + I +F+
Sbjct: 355 LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQ 414

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M    +   + TF++VL AC +   +  G++V    +K  G+  +    + M+D+  + 
Sbjct: 415 YMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKN-GMDADLFVANAMLDMYSKL 473

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G +++A    S +P+K +   W  L   
Sbjct: 474 GAIDVAKALFSLIPVKDSVS-WNALIVG 500



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 178/383 (46%), Gaps = 31/383 (8%)

Query: 330 ASLRNSHMGY---MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE-MGKSAS 385
           A L  +H      + HA++++ G+ L   +G A+VD+Y   G +  A + L    G  AS
Sbjct: 61  AGLHRTHQARACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPAS 120

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQI 443
           S + ++ ++   R+    + ++AF Q +R       D+F  + +L ACS L +L    Q+
Sbjct: 121 SAAASSVLSCHARSGSPRDVLDAF-QRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQV 179

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  ++KS F S+V   + L++ Y KCG  +DA R+F  +   D + W SMI  Y + GR 
Sbjct: 180 HCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRY 239

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE-----SMVKEYGILPEE 558
           ++A+ LF +M   G  P   T + ++S  +  G + D + + +     S V    ++   
Sbjct: 240 QQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASY 299

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
           +      ++ G    ++          + PT   +  + +A    +       I    ++
Sbjct: 300 SQSGLDSEVFGLYKDMK-------KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVK 352

Query: 619 LDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
               DA V+V  +L N+Y + G  +DA+      K+ + S E     I ++N I   F Q
Sbjct: 353 -HGLDANVFVGSSLINLYVKHGCISDAK------KVFDFSTEKN---IVMWNAILYGFVQ 402

Query: 677 NKSHSEMPKVYEKLKQLMQQIED 699
           N+   E  ++++ +++   + +D
Sbjct: 403 NELQEETIQMFQYMRRADLEADD 425


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 199/619 (32%), Positives = 330/619 (53%), Gaps = 16/619 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           ++ HAL+ +T +  +   ++ L++  A    GD+     +  QM   D   CN ++ GYA
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++    +A S +  +    V  ++YTY  +LA C  L A+  G++ H + +K  + S   
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE-D 313
           V NAL+  Y  CG    A  VF+    R+V++W  +IN     G  EK   L+  M + D
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            + P+E T    + +CA L N   G   H+   + G+     V  AI+DMY    +I  A
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           ++    + +    +SW + ++G  ++   +EA+  F +M  N    DE T   +L AC+ 
Sbjct: 268 QEVFNRI-REKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQ 326

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             +L   + IH  I K +   ++ + ++L++ Y KCGS + A +VF ++   +V +WN++
Sbjct: 327 TGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAL 386

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I   + +G    AI LF++M  + + P + TF+A+L ACSH+GLV +G  +F++M  ++ 
Sbjct: 387 IGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQ 446

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P   HY C+VDLL RA K++ AL FI N+PIK  + +W  L  ACR      +AE I 
Sbjct: 447 IEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIG 506

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           ++++EL+PD    YV LSN+YA       A + RK MK K I K PGCSWIE+   I++F
Sbjct: 507 RRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQF 566

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIE-DIGHT-----------DNEKEDRVLYHSERLAVG 721
            + ++SH +  ++Y  ++++ +++  D GH            + EKE  +  HSE+LA+ 
Sbjct: 567 VAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIA 626

Query: 722 FGLISLPAKNKFECSRTLE 740
            GLIS P+ +     + L 
Sbjct: 627 LGLISTPSGSPIRIVKNLR 645



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 160/311 (51%), Gaps = 2/311 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C+R   ++LGRR+H  + K     D FV  +L+  Y  CG       V  +    D
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + + N ++  +    L ++AF    ++  +D ++P+  T  +++  C  L  ++ GK LH
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLH 236

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           + + +L       V+NA+L MY KC  +E A+ VF  + +++V+SWT++++G  + G ++
Sbjct: 237 SYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQ 296

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M+ + I+ +E T    L++CA       G   H  + K  +     + TA+V
Sbjct: 297 EALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALV 356

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+  G I  A +  + M +  +  +WNA I G   +   E+AI  F QM  +    D+
Sbjct: 357 DMYAKCGSIDLALQVFRRM-RVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415

Query: 422 FTYSSILKACS 432
            T+ ++L ACS
Sbjct: 416 VTFIALLCACS 426



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 132/582 (22%), Positives = 240/582 (41%), Gaps = 86/582 (14%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC +F++S  R  + T +++ N ++N   KG+S   +   ++            N  P  
Sbjct: 165 ACDVFDESTVR-DVVTWNIMINAHLN---KGLSEKAFDLLDEM-------TKLDNLRP-- 211

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D+  ++ ++  C++   LE G+  H+   +  +  +  V  ++++MY KC D
Sbjct: 212 --------DEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDD 263

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I+S   V  ++   D+ S   +L+G AK+  F +A + F K+    ++ +  T   +L+ 
Sbjct: 264 IESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSA 323

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C    A+D+GK +H    K +      +  AL+ MY KCG ++ A  VF  +  RNV +W
Sbjct: 324 CAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTW 383

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I G   HG  E  + L   M  D + P++ TF   L +C+           HA ++ 
Sbjct: 384 NALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS-----------HAGLVD 432

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+A           M+  +   ++ + +++  G           +    R +K ++A+ 
Sbjct: 433 EGLA-----------MFQAMKNKFQIEPRMEHYG---------CVVDLLCRARKVDDALA 472

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
               M       +   ++++L AC         E+I  R+++ + +S       L   Y 
Sbjct: 473 FIENM---PIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRY-VMLSNLYA 528

Query: 468 KCGSWEDAERVFSQLTAADV-----VSW---NSMIKAYSQNGRARKAIILFEKMVVEGIR 519
               W+ A ++  Q+    +      SW   N MI  +    R+         M+ E  R
Sbjct: 529 GVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 588

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             N                 DG  V  +    + I  EE  +S    L   + KL IAL 
Sbjct: 589 RVN----------------LDGGHVPGTANVLFDIEEEEKEHS----LFLHSEKLAIALG 628

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKM-AEFISKQILELD 620
            IS  P      I + L     CHS LK+ ++  +++I+  D
Sbjct: 629 LIST-PSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARD 669


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 205/621 (33%), Positives = 326/621 (52%), Gaps = 17/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L  GR  HA      +  D FV+ +L+++Y +C        V  +MP  D
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + + N +LAGYA + ++  A +  L + D   ++PN  T  ++L +     A+ +G  +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 242 AQTMKL---QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           A  ++    Q   +  +  ALL MY KC  +  A  VF G+  RN ++W+A+I GF    
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 299 DYEKPLRLVCLMREDGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
              +   L   M  +G+   +  +   AL  CASL + HMG   HA + K G+       
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++ MY+  G I EA     E+     ++S+ A ++G  +N K EEA   F +M   + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIA-VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNM 404

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T  S++ ACS L +L   +  H  ++         + +SLI+ Y KCG  + + +
Sbjct: 405 EPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQ 464

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++ A DVVSWN+MI  Y  +G  ++A  LF  M  +G  P + TF+ +++ACSHSGL
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G+  F++M  +YGILP   HY CMVDLL R G L+ A  FI ++P+K    +W  L 
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H ++ + + +S+ I +L P+    +V LSN+++ AG   +A E R + K+K   K
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---------- 707
            PG SWIE+   ++ F   ++SH     +Y +L  +M  I+ +G+  +            
Sbjct: 645 SPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDLEEEE 704

Query: 708 -EDRVLYHSERLAVGFGLISL 727
            E  +LYHSE+LA+ FG++SL
Sbjct: 705 KEKALLYHSEKLAIAFGVLSL 725



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 222/487 (45%), Gaps = 11/487 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  ++P  D  + N L+  Y+    F  A   +  +    V PN YT+  +L  C +L  
Sbjct: 56  VFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVD 115

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G+ +HA        +   VS AL+ +YI+C     A +VF  +  R+V++W A++ G
Sbjct: 116 LRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAG 175

Query: 294 FKQHGDYEKPL-RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           +  HG Y   +  L+ +    G+ PN  T    L   A       G   HA  ++  +  
Sbjct: 176 YANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQ 235

Query: 353 GD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +    +GTA++DMY+   ++  A +    M    + V+W+A I GF    +  EA   F
Sbjct: 236 NEEQVLIGTALLDMYAKCKQLVYACRVFHGM-PVRNDVTWSALIGGFVLCDRMTEAFNLF 294

Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             M V         + +S L+ C+ L  L    Q+H+ I KS   +++   +SL+  Y K
Sbjct: 295 KDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAK 354

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G   +A   F ++   D +S+ +++    QNG+A +A ++F+KM    + P  +T +++
Sbjct: 355 AGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           + ACSH   +Q G+    S++   G+  E +  + ++D+  + GK++++      +P + 
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIR-GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARD 473

Query: 589 TAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
               W  + A    H   K A   F+  +     PDD   ++ L    + +GL  + +  
Sbjct: 474 VVS-WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDD-VTFICLIAACSHSGLVTEGKHW 531

Query: 647 RKLMKMK 653
              M  K
Sbjct: 532 FDTMTHK 538



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 32/354 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC++F+  P R  ++ S LI  G++  +    + N        F D  ++  C       
Sbjct: 259 ACRVFHGMPVRNDVTWSALI-GGFVLCDRMTEAFN-------LFKDMLVEGLC------- 303

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                  L    V   L  C+    L +G + HALI K+ +  D   + SL++MYAK G 
Sbjct: 304 ------FLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGL 357

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I        ++   D  S   LL+G  +N   ++AF  F K+   +++P+  T  +++  
Sbjct: 358 INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPA 417

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C  L+A+  GK  H   +      +T++ N+L+ MY KCG ++ +  VF+ +  R+V+SW
Sbjct: 418 CSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSW 477

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMF 341
             +I G+  HG  ++   L   M+  G  P++ TF   +A+C     SH G      + F
Sbjct: 478 NTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC-----SHSGLVTEGKHWF 532

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                K G+         +VD+ +  G + EA + ++ M   A    W A +  
Sbjct: 533 DTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 178/392 (45%), Gaps = 18/392 (4%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  +I  G +  A  VF+ +   +  ++ A+I  +   G +   + L   M    + PN+
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           YTF   L +C++L +   G   HA     G+    FV TA++D+Y        A+    +
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-----VRNDAACDEFTYSSILKACSLL 434
           M      V+WNA +AG+  +     AI     M     +R +A+    T  S+L   +  
Sbjct: 161 M-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNAS----TLVSLLPLLAQH 215

Query: 435 PSLATCEQIHSRIVKSKFESN---VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            +L     IH+  +++  E N   V +G++L++ Y KC     A RVF  +   + V+W+
Sbjct: 216 GALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWS 275

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFESMVK 550
           ++I  +    R  +A  LF+ M+VEG+   ++T +A  L  C+    +  G ++  +++ 
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQL-HALIA 334

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           + GI  +    + ++ +  +AG +  A +F   + +K T   +  L + C  +   + A 
Sbjct: 335 KSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAF 393

Query: 611 FISK--QILELDPDDAAVYVTLSNMYAEAGLQ 640
            + K  Q   ++PD A +   +      A LQ
Sbjct: 394 LVFKKMQACNMEPDIATMVSLIPACSHLAALQ 425


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/579 (31%), Positives = 319/579 (55%), Gaps = 1/579 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS  + E  L  G + H L  K  +  +  V  +LV+MYAKC  +     +   MP  D+
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N +++G  +N   DQA   F  +    ++P+  T  ++L     L+  ++GK+LH  
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++        + +AL+ +Y KC  +  A+SV++     +V+  + +I+G+  +G  ++ 
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           +++   + E GI PN       L +CAS+    +G   H+  +K       +V +A++DM
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + +    +     +   V+WN+ I+ F +N + EEA+  F +M          T
Sbjct: 494 YAKCGRL-DLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVT 552

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SS+L AC+ LP++   ++IH  ++K    +++   S+LI+ Y KCG+ E A RVF  + 
Sbjct: 553 ISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMP 612

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + VSWNS+I +Y   G  ++++ L   M  EG +  + TFLA++SAC+H+G VQ+G +
Sbjct: 613 EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLR 672

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F  M +EY I P   H++CMVDL  RAGKL+ A+  I ++P KP A IW  L  ACR H
Sbjct: 673 LFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVH 732

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++AE  S+++ +LDP ++  YV +SN+ A AG      + R+LMK  ++ K PG SW
Sbjct: 733 RNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSW 792

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           ++V N  + F + +KSH +   +Y  LK ++ ++ + G+
Sbjct: 793 VDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGY 831



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 244/474 (51%), Gaps = 2/474 (0%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D      V+  C+    + LGR  H       + GD FV ++L+ MYA  G +     
Sbjct: 143 LPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQ 202

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   M   D    N ++ GY K      A   F  +     +PN  T +  L++  + S 
Sbjct: 203 VFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESD 262

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G QLH   +K    S+ AV+N L++MY KC  ++D   +F  + + ++++W  +I+G
Sbjct: 263 LFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISG 322

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q+G  ++ L L C M++ GI P+  T    L +   L   + G   H  +++  + + 
Sbjct: 323 CVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMD 382

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            F+ +A+VD+Y     +  A + + +  K+   V  +  I+G+  N  ++EA++ F  ++
Sbjct: 383 VFLVSALVDIYFKCRAVRMA-QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLL 441

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 +    +S+L AC+ + ++   +++HS  +K+ +E   +V S+L++ Y KCG  +
Sbjct: 442 EQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLD 501

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            +  +FS+++A D V+WNSMI +++QNG   +A+ LF +M +EG++ +N T  +VLSAC+
Sbjct: 502 LSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACA 561

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
               +  G+++   ++K   I  +    S ++D+ G+ G LE A     ++P K
Sbjct: 562 SLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEK 614



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 220/477 (46%), Gaps = 14/477 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++ VL  C     L LG + H   +T      D  +   LV MY      +  VAV   +
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 179 PYLDIASC----NCLLAGYAKNALFDQAFSFFLKLDGIDVQP--NHYTYSTMLAICGSLS 232
           P    A+C    N L+ G      +  A  F+LK+      P  + +T+  ++  C +L 
Sbjct: 102 PR-GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           AI  G+ +H     L       V +AL+ MY   G++ DA  VF+G+ +R+ + W  +++
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ + G     + L   MR  G +PN  T    L+  A+  +   G   H   +K G+  
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V   +V MY+    + +  K    M +    V+WN  I+G  +N   ++A+  F  M
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            ++    D  T  S+L A + L      +++H  IV++    +V + S+L++ Y KC + 
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A+ V+    A DVV  ++MI  Y  NG +++A+ +F  ++ +GIRP      +VL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIALIFISNLPIK 587
           +    ++ GQ++    +K      E   Y  S ++D+  + G+L+++    S +  K
Sbjct: 460 ASMAAMKLGQELHSYALKN---AYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK 513



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 152/298 (51%), Gaps = 1/298 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VL  C+    ++LG+  H+   K A  G  +V ++L++MYAKCG +     +  ++ 
Sbjct: 452 IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKIS 511

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N +++ +A+N   ++A + F ++    V+ ++ T S++L+ C SL AI  GK+
Sbjct: 512 AKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKE 571

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K    +     +AL+ MY KCG +E A  VFE + ++N +SW +II  +  +G 
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGT 358
            ++ + L+  M+E+G   +  TF   +++CA       G  +F     +  +A       
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFA 691

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            +VD+YS  G++ +A + + +M     +  W A +     ++  E A  A  ++ + D
Sbjct: 692 CMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLD 749


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 185/545 (33%), Positives = 302/545 (55%), Gaps = 4/545 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  CS    +E GR  H L   +      FV  SL+ MY  CG+++    V   M    
Sbjct: 128 VIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKS 187

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GY KN   + A   F ++    V+ +  +  ++L  CG L  ++ G+++H 
Sbjct: 188 VVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG 247

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ + L K  VSNAL+ MY KCG M++A  VF+ +V+R+V+SWT++ING+  +GD + 
Sbjct: 248 -LVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKS 306

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M+ +G+ PN  T  + L +CASL N   G   H  V+K+ +     V T+++D
Sbjct: 307 ALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLID 366

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    +  +        +   +V WNA ++G   N+   EAI  F +M+      +  
Sbjct: 367 MYAKCNCLGLSFSVFTRTSRK-KTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAA 425

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L A  +L  L     I+S +++S F SN+ V +SLI+ Y+KCGS E A ++F+ +
Sbjct: 426 TCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTI 485

Query: 483 --TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                D+  W+ +I  Y  +G    A+ LF++MV  G++P + TF +VL +CSH+G+V D
Sbjct: 486 PVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDD 545

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G  +F+ M+K++  +P + HY+CMVDLLGRAG+++ A   I  +P  P   +W  L  AC
Sbjct: 546 GLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
             H ++++ E  ++ + EL+P +   YV L+ +YA  G   DAE  R+ M    + K P 
Sbjct: 606 VMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPA 665

Query: 661 CSWIE 665
            S IE
Sbjct: 666 HSLIE 670



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 225/476 (47%), Gaps = 11/476 (2%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           + P    Y ++L   G+  ++   KQLHA  +    LS   + + L+  Y  CG + +A 
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNAR 75

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASL 332
            +F+ L QR  + +  +I  +   GDY + +++   ++      P+ YT+   + +C+ L
Sbjct: 76  KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSEL 135

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
                G + H   +        FV  +++ MY   GE+ EA+K    M K  S VSWN  
Sbjct: 136 LLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAM-KEKSVVSWNTM 194

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I G+F+N     A+  F+QMV +    D  +  S+L AC  L  L    ++H  +V+ K 
Sbjct: 195 INGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKV 253

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
                V ++L++ Y KCGS ++A  VF  +   DVVSW SMI  Y  NG A+ A+ LF+ 
Sbjct: 254 LGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKI 313

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M +EG+RP + T   +L AC+    ++DG +     V +  +  E A  + ++D+  +  
Sbjct: 314 MQIEGLRPNSVTIALILLACASLNNLKDG-RCLHGWVMKQRLYSEVAVETSLIDMYAKCN 372

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KMAEFISKQILELDPDDAAVYVTL 630
            L ++    +    K T P W  L + C  H+ L  +      K ++E    +AA   +L
Sbjct: 373 CLGLSFSVFTRTSRKKTVP-WNALLSGC-VHNKLATEAIGLFKKMLMEGVEINAATCNSL 430

Query: 631 SNMYA-EAGLQADAEEQRKLMKMKEISK-EPGCSWIEVYNKIYRFFSQNKSHSEMP 684
              Y   A LQ        LM+   +S  +   S I++Y+K     S +K  + +P
Sbjct: 431 LPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIP 486



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 256/536 (47%), Gaps = 17/536 (3%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L +    + L   ++ HA LIT   +  D  + + LV  YA CG + +   +  ++   
Sbjct: 27  LLKHYGAAQSLTSTKQLHAHLITSGLLSID--IRSVLVATYAHCGYVHNARKLFDELRQR 84

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
                N ++  Y     + +A   FL++ G  D  P++YTY  ++  C  L  ++ G+ L
Sbjct: 85  GTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVL 144

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  T+  ++ S   V N+LL MY+ CG +E+A  VF+ + +++V+SW  +ING+ ++G  
Sbjct: 145 HGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFA 204

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG-DFVGTA 359
              L +   M + G++ +  +    L +C  L+   +G   H  V ++   LG   V  A
Sbjct: 205 NTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEK--VLGKKIVSNA 262

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY+  G + EA+     M +    VSW + I G+  N   + A+  F  M       
Sbjct: 263 LVDMYAKCGSMDEARLVFDNMVER-DVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRP 321

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T + IL AC+ L +L     +H  ++K +  S V V +SLI+ Y KC     +  VF
Sbjct: 322 NSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVF 381

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           ++ +    V WN+++     N  A +AI LF+KM++EG+    +T  ++L A    G++ 
Sbjct: 382 TRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA---YGILA 438

Query: 540 DGQKV--FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK-PTAPIWRPL 596
           D Q V    S +   G +      + ++D+  + G LE A    + +P+      +W  +
Sbjct: 439 DLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSII 498

Query: 597 FAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            A    H   + A  + KQ+++  + P+D   + ++    + AG+  D     K M
Sbjct: 499 IAGYGMHGHGETAVSLFKQMVQSGVKPNDVT-FTSVLQSCSHAGMVDDGLYLFKFM 553



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 89  DSFPDGFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITK 145
           ++  +G+  +G +NT  V    +      +D   V+ VL  C   + LE+GRR H L+ +
Sbjct: 192 NTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEE 251

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
             V G + V+ +LV+MYAKCG +     V   M   D+ S   ++ GY  N     A S 
Sbjct: 252 K-VLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSL 310

Query: 206 F--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
           F  ++++G+  +PN  T + +L  C SL+ + +G+ LH   MK +  S+ AV  +L+ MY
Sbjct: 311 FKIMQIEGL--RPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMY 368

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KC  +  + SVF    ++  + W A+++G   +    + + L   M  +G++ N  T  
Sbjct: 369 AKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCN 428

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             L +   L +       ++ +++ G      V T+++D+YS  G +  A K    +   
Sbjct: 429 SLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVD 488

Query: 384 ASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
              +  W+  IAG+  +   E A+  F QMV++    ++ T++S+L++CS
Sbjct: 489 VQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCS 538


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 192/588 (32%), Positives = 304/588 (51%), Gaps = 6/588 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK---- 176
           +  LS C+  +CL  G   H  + K  V  D+F+ ++L+ MY KCGDIK+   V +    
Sbjct: 146 LAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRD 205

Query: 177 -QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++   ++A  N ++ GY  N     A   F+++  + + P+  T   +L +C  L  + 
Sbjct: 206 NELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLA 265

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GKQ+H   + L       V  AL+ MY KCG  E +  +F+     N++ W +++    
Sbjct: 266 VGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCA 325

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G   + L        D   P+      AL +C+ L     G   H   IK G     F
Sbjct: 326 QNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVF 385

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG A+VD Y   G++ E  +Q+     +   VSWNA I+GF +N+  +EA++AF  M   
Sbjct: 386 VGGALVDFYGKCGDM-EYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSK 444

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T + IL  C+ L  +  C+++H  +++  FE+N  V +SLI AY KCG    +
Sbjct: 445 QIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSS 504

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF +L   + V+WNS++  +  +GR  +    FEKM    I+P + TF ++LS+CSHS
Sbjct: 505 RTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHS 564

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G V  G K F SM+++Y + P    Y+CMVDLLGRAG L  A   I ++P  P   IW  
Sbjct: 565 GKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGS 624

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L A+C+ H + K+AE ++  I ELD       V L+N+Y ++G   +    R  +K   +
Sbjct: 625 LLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGL 684

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            K+PGCSWIEV N I+ F + + SH     +Y  ++ L  +++ +G+ 
Sbjct: 685 KKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRVGYV 732



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 241/506 (47%), Gaps = 12/506 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H  + K     D FV  SL+ MY KCG   + V + ++M   D  S N +++G+ +
Sbjct: 58  GKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI--CGSLSAIDEGKQLHAQTMKLQYLSKT 253
           +  + ++   F ++        H   + + A+  C S+  +  G ++H   +K    S  
Sbjct: 118 SGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDE 177

Query: 254 AVSNALLTMYIKCGMMEDAESVFEG-----LVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            + +AL+ MY+KCG +++AE+VFE      LV RN+  W  +I G+  +      L L  
Sbjct: 178 FLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFV 237

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M E GI P+  T  V L  C+ L +  +G   H  ++  G+     VGTA+++MY   G
Sbjct: 238 EMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCG 297

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           +  E   Q+ +  ++ + V W + +    +N    EA+E FS+ + +    D     + L
Sbjct: 298 DP-ETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAAL 356

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           +ACS L        IH   +K  F+S+V VG +L++ Y KCG  E A++VF  L+  D+V
Sbjct: 357 RACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLV 416

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN++I  ++QN  A +A+  F  M  + I+P   T   +LS C+H  ++   ++V   +
Sbjct: 417 SWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYL 476

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDL 606
           ++ +       + S ++    + G +  +      LP++     W  +      H  +D 
Sbjct: 477 LRHWFETNALVNNS-LISAYAKCGDIHSSRTVFEKLPVRNEVT-WNSILLGFGMHGRTDE 534

Query: 607 KMAEFISKQILELDPDDAAVYVTLSN 632
             A F   +   + PD       LS+
Sbjct: 535 MFATFEKMKEANIKPDHGTFTSLLSS 560



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 222/462 (48%), Gaps = 15/462 (3%)

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLD--GIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           +D++  N ++    ++  F+ A   +L     G  V+   + +  ++   G L  +++GK
Sbjct: 1   MDVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRF-FPCLIKAFGGLYDVNKGK 59

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   +K  +L    V N+LL MY KCG   +A  +FE + +R+ +SW  +I+GF Q G
Sbjct: 60  QIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSG 119

Query: 299 DYEKPLRLVCLMRED--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           DY K L +   M ++  G   N      AL+SCAS++    G   H  ++K+G+   +F+
Sbjct: 120 DYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFL 179

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSA----SSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            +A+++MY   G+I  A+   + +  +     +   WN  I G+  N+    A+E F +M
Sbjct: 180 VSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEM 239

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +    + D  T   +L  CS L  LA  +QIH  I+    + +V VG++L+E Y KCG  
Sbjct: 240 LELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDP 299

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E + ++F +    ++V W S++   +QNG   +A+  F + +++   P     LA L AC
Sbjct: 300 ETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRAC 359

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S   L   G  +    +K  G   +      +VD  G+ G +E A      L  +     
Sbjct: 360 SFLSLKPRGMAIHGFAIK-MGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVS- 417

Query: 593 WRPL---FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           W  L   FA  +C +D  +  F   Q  ++ P+   +   LS
Sbjct: 418 WNALISGFAQNKC-ADEALKAFRDMQSKQIKPNTVTMACILS 458



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 1/280 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++  L  CS       G   H    K     D FV  +LV+ Y KCGD++    V 
Sbjct: 348 DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVF 407

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ S N L++G+A+N   D+A   F  +    ++PN  T + +L++C  LS + 
Sbjct: 408 YGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMI 467

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             K++H   ++  + +   V+N+L++ Y KCG +  + +VFE L  RN ++W +I+ GF 
Sbjct: 468 LCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFG 527

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGD 354
            HG  ++       M+E  I P+  TFT  L+SC+       G+  F++ +    +    
Sbjct: 528 MHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRV 587

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              T +VD+    G + +A   +  M  S     W + +A
Sbjct: 588 EQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLA 627


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 183/535 (34%), Positives = 300/535 (56%), Gaps = 15/535 (2%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA+ +   Y     ++  L+ MY +CG +EDA +V +G
Sbjct: 36  HDYDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDG 95

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +RNV+SWTA+I+G+ Q+    +   L  +M   G +PNE+T    L SC   +  H  
Sbjct: 96  MPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQH 155

Query: 339 YM--FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            +   HA  IK+   L  FVG++++DMY+    I EA++   +M  +   VS+   ++G+
Sbjct: 156 QIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVF-DMLPARDVVSYTTILSGY 214

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            R    EEA+  F Q+      C++ T+S +L A S L S+   +Q+H  I++ +    +
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            + +SLI+ Y+KCG    + RVF  +    VVSWN+M+  Y ++G A + + LF + + +
Sbjct: 275 ALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF-RFMCD 333

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            ++P + T LAVL   SH GLV +G  +F+ +VKE   L    HY C++DLLGR+G+LE 
Sbjct: 334 KVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEK 393

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           AL+ I  +P +PT  IW  L  ACR H+++ + EF+++++ +++P++A  YV LSN+YA 
Sbjct: 394 ALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAA 453

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
           A +  D    RKLM  K + KEPG SW+ +   I+ F S  + H     +  K+ ++   
Sbjct: 454 ARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAA 513

Query: 697 IEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           I+  G             D +KE  +L HSE+LA+ FGL+S P+    +  + L 
Sbjct: 514 IKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLR 568



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 131/267 (49%), Gaps = 18/267 (6%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA   K       FV +SL++MYA+  +I+    V   +P  D+ S   +L+GY + 
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            L ++A + F +L    +Q N  T+S +L     LS++D GKQ+H   ++ +     A+ 
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG-DYE--KPLRLVCLMRED 313
           N+L+ MY KCG +  +  VF+ + +R+V+SW A++ G+ +HG  YE  +  R +C    D
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC----D 333

Query: 314 GIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVGTAIVDMYSGL 367
            + P+  T    L     L  SH G       MF   V ++   L       ++D+    
Sbjct: 334 KVKPDSVTLLAVL-----LGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRS 388

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIA 394
           G++ +A   +++M    +   W + + 
Sbjct: 389 GQLEKALLLIQKMPFQPTRAIWGSLLG 415



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 3/179 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+  S    ++ G++ H LI +  +     +  SL++MY+KCG +     V   MP   
Sbjct: 245 LLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERS 304

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +L GY ++ +  +    F +     V+P+  T   +L        +DEG  +  
Sbjct: 305 VVSWNAMLMGYGRHGMAYEVVQLF-RFMCDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFD 363

Query: 243 QTMKLQ-YLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
             +K Q  L  T     ++ +  + G +E A  + + +  Q     W +++   + H +
Sbjct: 364 HIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHAN 422


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 189/604 (31%), Positives = 332/604 (54%), Gaps = 13/604 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ H+ + K        V+ SL++ Y K   +     +   +P  D  + N LL GY+K 
Sbjct: 218 RQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKE 277

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +A + F K+  +  +P  +T++ +L     L  I+ G+Q+H   +K  ++    V+
Sbjct: 278 GFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVA 337

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NALL  Y K   + +A  +F  + + + IS+  ++  +  +G  ++ L L   ++  G D
Sbjct: 338 NALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFD 397

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
              + F   L+  A   N  +G   H+Q I         VG ++VDMY+  GE  EA + 
Sbjct: 398 RRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRI 457

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             ++    SSV W A I+ + +    E+ ++ F +M R     D  TY+SI++AC+ L S
Sbjct: 458 FSDLAIQ-SSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLAS 516

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +Q+HS I+ S + SNV  GS+L++ Y KCGS +DA ++F ++   + VSWN++I A
Sbjct: 517 LTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISA 576

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+QNG     + LFE+MV  G++P + + L++L ACSH GLV++G + F+SM + Y ++P
Sbjct: 577 YAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVP 636

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           ++ HY+  +D+L R G+ + A   ++ +P +P   +W  +  +C  H + ++A+  + Q+
Sbjct: 637 KKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQL 696

Query: 617 LELDP-DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
             +    DAA YVT+SN+YA AG   +  + +K M+ + + K P  SW+E+ +K + F +
Sbjct: 697 FNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTA 756

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGL 724
            +K+H +M ++ +KL +L +++   G+           D E K + + YHSER+A+ F L
Sbjct: 757 NDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFAL 816

Query: 725 ISLP 728
           IS P
Sbjct: 817 ISTP 820



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/540 (25%), Positives = 258/540 (47%), Gaps = 15/540 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F T +++  Y K G++     +   M      +   L+ GYA+N  F +AF  F+++   
Sbjct: 133 FSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRH 192

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            + P+H + +T+L+      +++E +Q+H+  +KL Y S   VSN+LL  Y K   +  A
Sbjct: 193 GIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLA 252

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             +F  + +R+ +++ A++ G+ + G   + + L   M+E G  P E+TF   L +   L
Sbjct: 253 FQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQL 312

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H  V+K       FV  A++D YS    + EA K   EM      +S+N  
Sbjct: 313 DDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEM-PEVDGISYNVL 371

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           +  +  N + +E++E F ++         F ++++L   ++  +L    QIHS+ + +  
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
            S + VG+SL++ Y KCG + +A R+FS L     V W +MI +Y Q G     + LF +
Sbjct: 432 ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVE 491

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M    I    +T+ +++ AC+    +  G+++   ++   G +      S +VD+  + G
Sbjct: 492 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS-GYISNVFSGSALVDMYAKCG 550

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----LKMAEFISKQILELDPDDAAVYV 628
            ++ AL     +P++ +   W  L +A   + D    L++ E + +  L+  PD  ++  
Sbjct: 551 SIKDALQMFQEMPVRNSVS-WNALISAYAQNGDGDCTLRLFEEMVRSGLQ--PDSVSLLS 607

Query: 629 TLSNM----YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
            L         E GLQ   +   ++ K+    KE   S I++  +  RF    K  ++MP
Sbjct: 608 ILCACSHCGLVEEGLQY-FDSMTRIYKLVP-KKEHYASTIDMLCRGGRFDEAEKLMAQMP 665



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 191/372 (51%), Gaps = 15/372 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           +E G++ H  + K     + FV  +L++ Y+K   +     +  +MP +D  S N L+  
Sbjct: 315 IEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTC 374

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N    ++   F +L        ++ ++T+L+I      +D G+Q+H+QT+    +S+
Sbjct: 375 YAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISE 434

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V N+L+ MY KCG   +A  +F  L  ++ + WTA+I+ + Q G +E  L+L   M+ 
Sbjct: 435 ILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQR 494

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             I  +  T+   + +CASL +  +G   H+ +I  G     F G+A+VDMY+  G I +
Sbjct: 495 AKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKD 554

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A +  +EM    +SVSWNA I+ + +N   +  +  F +MVR+    D  +  SIL ACS
Sbjct: 555 ALQMFQEM-PVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACS 613

Query: 433 L-------LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-A 484
                   L    +  +I+  + K +     H  S+ I+   + G +++AE++ +Q+   
Sbjct: 614 HCGLVEEGLQYFDSMTRIYKLVPKKE-----HYAST-IDMLCRGGRFDEAEKLMAQMPFE 667

Query: 485 ADVVSWNSMIKA 496
            D + W+S++ +
Sbjct: 668 PDEIMWSSVLNS 679



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 90/181 (49%), Gaps = 2/181 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C+    L LG++ H+ I  +    + F  ++LV+MYAKCG IK  + + ++MP  +
Sbjct: 507 IVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRN 566

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ-LH 241
             S N L++ YA+N   D     F ++    +QP+  +  ++L  C     ++EG Q   
Sbjct: 567 SVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFD 626

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
           + T   + + K     + + M  + G  ++AE +   +  + + I W++++N    H + 
Sbjct: 627 SMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQ 686

Query: 301 E 301
           E
Sbjct: 687 E 687



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 49/96 (51%)

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N+   +++I  Y K G+  +A  +F  +     V+W  +I  Y+QN + R+A  LF +M 
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             GI P + +   +LS  +    V + ++V   ++K
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIK 226



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 425 SSILKACS--LLPSLATCE---QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           ++I+K C+  L+ +L   +    + + I+K+ F  N +  + L++++ + G    A ++F
Sbjct: 65  NNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLF 124

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++   ++ S N+MI  Y ++G   +A  LF+ M     + T  T+  ++   + +   +
Sbjct: 125 DEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSM----FQRTAVTWTMLIGGYAQNNQFR 180

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMV 565
           +   +F  M + +GI P+    + ++
Sbjct: 181 EAFGLFIEMGR-HGIDPDHVSLATLL 205


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 197/605 (32%), Positives = 332/605 (54%), Gaps = 17/605 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           G+  HA + + A+     +   +LVN+YAKC  I +  ++ + MP  D  S N +++G  
Sbjct: 373 GQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLD 432

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
            N  F++A + F  +    + P+ ++  + L+ C SL  I  G+Q+H + +K       +
Sbjct: 433 HNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVS 492

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF-KQHGDYEKPLRLVCLMRED 313
           VSNALLT+Y +   ME+ + VF  + + + +SW + I           + ++    M + 
Sbjct: 493 VSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQA 552

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  PN  TF   L++ +SL    +G   HA ++K  +A  + +   ++  Y    ++ + 
Sbjct: 553 GWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDC 612

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +     M +    VSWNA I+G+  N    +A+     M++     D+FT +++L AC+ 
Sbjct: 613 EIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACAS 672

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           + +L    ++H+  +++  E+ V VGS+L++ Y KCG  + A R F  +   ++ SWNSM
Sbjct: 673 VATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSM 732

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I  Y+++G   KA+ LF +M   G  P + TF+ VLSACSH GLV +G + F+SM + Y 
Sbjct: 733 ISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYE 792

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF-- 611
           + P   H+SCMVDLLGRAG ++    FI  +P+ P A IWR +  AC C ++ +  E   
Sbjct: 793 LAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGAC-CRANSRNTELGR 851

Query: 612 -ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             +K ++EL+P +A  YV LSNM+A  G   D EE R  M+  E+ KE GCSW+ + + +
Sbjct: 852 RAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGV 911

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLYHSERLA 719
           + F + +++H E  K+Y+KLK++M ++ D+G+    K           E+ + YHSE+LA
Sbjct: 912 HVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLA 971

Query: 720 VGFGL 724
           + F L
Sbjct: 972 IAFVL 976



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 222/437 (50%), Gaps = 17/437 (3%)

Query: 129 REEC-LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           R+ C +E   + H  I KT +  D F   +LVN++ + G++ S   +  +MP  ++ S +
Sbjct: 50  RDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWS 109

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL--SAIDEGKQLHAQTM 245
           CL++GYA+N + D+A   F  +    + PNHY   + L  C  L  + +  G ++H    
Sbjct: 110 CLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLIS 169

Query: 246 KLQYLSKTAVSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           K  Y S   +SN L++MY  C   ++DA  VFE +  +   SW +II+ + + GD     
Sbjct: 170 KSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAF 229

Query: 305 RLVCLMREDGID----PNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGT 358
           +L   M+ +  +    PNEYTF   +    SL +  +  +    A++ K       +VG+
Sbjct: 230 KLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGS 289

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V  ++  G I  AK   ++M    ++V+ N  + G  R  + EEA + F +M ++   
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQM-DDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVE 347

Query: 419 CDEFTYSSILKACSLLPSLA----TCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWE 473
            +  +Y+ +L A +   +L       +++H+ ++++   +  + +G++L+  Y KC + +
Sbjct: 348 INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +A  +F  + + D VSWNS+I     N R  +A+  F  M   G+ P+  + ++ LS+C+
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467

Query: 534 HSGLVQDGQKVFESMVK 550
             G +  GQ++    +K
Sbjct: 468 SLGWIMLGQQIHGEGIK 484



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 164/315 (52%), Gaps = 3/315 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI  LS C+    + LG++ H    K  +  D  V+ +L+ +YA+   ++    V   MP
Sbjct: 459 VISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP 518

Query: 180 YLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D  S N  +   A + A   QA  +FL++     +PN  T+  +L+   SLS ++ G+
Sbjct: 519 EYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGR 578

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQH 297
           Q+HA  +K       A+ N LL  Y KC  MED E +F  + + R+ +SW A+I+G+  +
Sbjct: 579 QIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHN 638

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   K + LV LM + G   +++T    L++CAS+     G   HA  I+  +     VG
Sbjct: 639 GILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVG 698

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMY+  G+I +   +  E+    +  SWN+ I+G+ R+    +A++ F+QM ++  
Sbjct: 699 SALVDMYAKCGKI-DYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQ 757

Query: 418 ACDEFTYSSILKACS 432
             D  T+  +L ACS
Sbjct: 758 LPDHVTFVGVLSACS 772



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 1/135 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   +  VLS C+    LE G   HA   +  +  +  V ++LV+MYAKCG I      
Sbjct: 658 LDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRF 717

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + MP  +I S N +++GYA++    +A   F ++      P+H T+  +L+ C  +  +
Sbjct: 718 FELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLV 777

Query: 235 DEGKQLHAQTMKLQY 249
           DEG + H ++M   Y
Sbjct: 778 DEGFE-HFKSMGEVY 791


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 187/579 (32%), Positives = 307/579 (53%), Gaps = 7/579 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   H    KT +    FV ++L++MY K G+I     V  +MP  +  +   ++ G  +
Sbjct: 135 GTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               +   ++F  +    V+ + Y Y+  L       A++ G+ +H QT+K  +   + V
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +N+L TMY KCG ++     F  +   +V+SWT I+  + Q G  +  L+    MR   +
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PNEYTF+  ++ CA+      G   HA V+  G      V  +I+ +YS  GE+    K
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M K    ++W+  IA + +    EEA E  S+M       +EF  +S+L  C  + 
Sbjct: 375 VFCSM-KFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMA 433

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   +Q+H+ ++    E    V S+LI  Y KCGS  +A ++F      D++SW +MI 
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+++G +++AI LFE +   G+RP + TF+ VL+ACSH+G+V  G   F SM K+Y I 
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT 553

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P + HY CM+DLL RAG+L  A   I ++PI+    +W  L  ACR H D+   +  + +
Sbjct: 554 PSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAE 613

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           +L+LDP+ A  ++TL+N++A  G   +A   R LMK K + KEPG S ++V + ++ F S
Sbjct: 614 VLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVS 673

Query: 676 QNKSHSEMPKVYEKLKQLMQQIE----DIGH--TDNEKE 708
            ++SH +   +Y  L++L   +E    ++ H  TD+ +E
Sbjct: 674 GDRSHPQGEDIYNILEELASGMEIYILELNHLVTDDSEE 712



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 47/467 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           +C++F++ P R  ++ + +I          G+ R GYS    ++  G       + V   
Sbjct: 170 SCKVFDEMPTRNAVTWTAVI---------TGLVRAGYSEAGLAYFSGM----GRSKVEYD 216

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+        + I  L   +    L  GR  H    K     + FV  SL  MY KCG 
Sbjct: 217 SYA--------YAI-ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           +   +   ++M  LD+ S   ++  Y +    D     F ++   +V PN YT+S +++ 
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C + + +  G+QLHA  + + +++  +V+N+++T+Y KCG +     VF  +  R++I+W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           + II  + Q G  E+    +  MR +G  PNE+     L+ C S+     G   HA V+ 
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+     V +A++ MY+  G I EA K   +  K    +SW A I+G+  +  ++EAIE
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEAIE 506

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSS 461
            F  + +     D  T+  +L ACS           H+ +V   F        + H+  S
Sbjct: 507 LFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFNSMSKDYHITPS 555

Query: 462 ------LIEAYNKCGSWEDAERVFSQLTAA-DVVSWNSMIKAYSQNG 501
                 +I+   + G   DAE +   +    D V W+++++A   +G
Sbjct: 556 KEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 230/485 (47%), Gaps = 9/485 (1%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPN 217
           + +  K   +K    +  Q+P  D  S   +++GY  ++   +A   F K+    +++ +
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +  S  L  CG       G  LH  ++K   ++   V +ALL MY+K G +  +  VF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  RN ++WTA+I G  + G  E  L     M    ++ + Y + +AL + A     + 
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H Q +K+G     FV  ++  MY+  G++       ++M ++   VSW   +  + 
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-RTLDVVSWTTIVTAYI 294

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +  K +  ++AF +M  ++   +E+T+S+++  C+    L   EQ+H+ ++   F + + 
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V +S++  Y+KCG      +VF  +   D+++W+++I AYSQ G   +A     +M  EG
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EI 576
            +P      +VLS C    +++ G+++  + V   G+       S ++ +  + G + E 
Sbjct: 415 PKPNEFALASVLSVCGSMAILEQGKQL-HAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473

Query: 577 ALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + IF+ +   K     W  + +  A   HS   +  F + Q + L P D+  ++ +    
Sbjct: 474 SKIFMDSW--KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRP-DSVTFIGVLTAC 530

Query: 635 AEAGL 639
           + AG+
Sbjct: 531 SHAGM 535



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 172/331 (51%), Gaps = 13/331 (3%)

Query: 223 TMLAICGSLSAIDEGKQLHAQ----TMKLQYLSKT--AVSNALLTMYIKCGMMEDAESVF 276
           T+LA+ G+ +  D  + L+ +    T+   + +K   A +N  L + +K   ++DA  +F
Sbjct: 14  TVLAVAGAKTN-DNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLF 72

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCASLR 333
           + L QR+ +SWT II+G+    D  + LRL   MR   E  IDP  +  ++ L +C    
Sbjct: 73  DQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDP--FLLSLGLKTCGLGL 130

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           N   G   H   +K G+    FVG+A++DMY  +GEI  + K   EM  + ++V+W A I
Sbjct: 131 NYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEM-PTRNAVTWTAVI 189

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G  R   +E  +  FS M R+    D + Y+  LKA +   +L     IH++ +K  F+
Sbjct: 190 TGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFD 249

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N  V +SL   YNKCG  +     F ++   DVVSW +++ AY Q G+    +  F++M
Sbjct: 250 ENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRM 309

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
               + P   TF AV+S C++   ++ G+++
Sbjct: 310 RASNVIPNEYTFSAVISCCANFARLKWGEQL 340


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 213/639 (33%), Positives = 331/639 (51%), Gaps = 44/639 (6%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNA 197
           HA +T+  +  D+F  A+LV+ Y KCG       V  +MP   +D+ S   L++ Y+ N 
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 198 LFDQAFSFFLKLD-----------GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             D+AF  F ++            G+DV       S     CGS + +  G  +H   +K
Sbjct: 135 CVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS-NCLRRGSAVHGLVVK 193

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPL 304
             +   T + N+++ MY  C  +  A  VF G+   QR+V+SW ++I+GF  +G+ E+ L
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERAL 253

Query: 305 RLVCLMREDG---IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL----GDFVG 357
           R    M  +G   ++PN  T    L SCA L         H  +  R  +L       V 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM----- 412
           TA++DM++  G +  A++    + +  + V W+A IAG+ +    EEA+  F QM     
Sbjct: 314 TALLDMHARCGNLALAREIFDGV-EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGN 372

Query: 413 -VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
            V  +   +  T  S++ ACS L +  +   IH   V +  + +  + S+LI+   KCG 
Sbjct: 373 MVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGD 432

Query: 472 WEDAERVFSQL--TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            E   +VFS++  +   VVSW+SMI A   +G  ++A+ LF +M   G  P   T+++VL
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVL 492

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH+GLV+ G+  F SM K+YG+ P   HY+C+VDLLGRAG L+ A   I N+PIK  
Sbjct: 493 SACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L AAC  H + K+ E + K+IL LD +    +V L+NMY +AG   D    R  
Sbjct: 553 LALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVE 612

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED----IGHTDN 705
           ++   + K PG S+IE+ N++Y F ++++SH E   +Y++L  L +++      +  T  
Sbjct: 613 LRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL 672

Query: 706 EKED--------RVLYHSERLAVGFGLISLPAKNKFECS 736
             ED        R  YHSERLA+ FGLI +   +   CS
Sbjct: 673 NVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCS 711



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 225/481 (46%), Gaps = 41/481 (8%)

Query: 194 AKNALFD--QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           AKNA  +   A +FF ++    V  N++T+  +L  C +L  +    Q+HA   +L   +
Sbjct: 26  AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAA 85

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQR--NVISWTAIINGFKQHGDYEKPLRLVCL 309
               + AL+  Y KCG    A  VF+ + +   +V+SWTA+I+ +  +G  ++  +    
Sbjct: 86  DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGR 145

Query: 310 MR-EDGIDPNE------YTFTVALASCASLRNSH---MGYMFHAQVIKRGMALGDFVGTA 359
           MR   G D +E       +    +++CA    S+    G   H  V+K G  +   +G +
Sbjct: 146 MRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNS 205

Query: 360 IVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +V MYS   ++  A +    +  +    VSWN+ I+GF  N + E A+  F  MV    +
Sbjct: 206 MVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTS 265

Query: 419 CDE---FTYSSILKACSLLPSLATCEQIHSRIVKSKFES-----NVHVGSSLIEAYNKCG 470
             E    T  ++LK+C+ L  + T   +H  I  S+  S     +V V ++L++ + +CG
Sbjct: 266 AVEPNRVTVIALLKSCAELGCVETSSWVHEYI-SSRHSSLLVAKDVVVLTALLDMHARCG 324

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG------IRPTNST 524
           +   A  +F  +   +VV W++MI  Y Q     +A+ LF +M++EG      ++P   T
Sbjct: 325 NLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVT 384

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGI---LPEEAHY-SCMVDLLGRAGKLEIALIF 580
            ++V++ACS  G  +       SM+ +Y +   L ++A   S ++D+  + G +E     
Sbjct: 385 LVSVIAACSRLGASRSA-----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQV 439

Query: 581 ISNLPIKP-TAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAG 638
            S +     T   W  +  A   H + K A E  S+        +   Y+++ +  + AG
Sbjct: 440 FSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAG 499

Query: 639 L 639
           L
Sbjct: 500 L 500



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 186/402 (46%), Gaps = 20/402 (4%)

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCL 189
           CL  G   H L+ K        +  S+V+MY+ C D+     V   +P    D+ S N L
Sbjct: 180 CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSL 239

Query: 190 LAGYAKNALFDQAFSFFLKL--DGID-VQPNHYTYSTMLAICGSLSAIDEGKQLH----A 242
           ++G+  N   ++A   F  +  +G   V+PN  T   +L  C  L  ++    +H    +
Sbjct: 240 ISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISS 299

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +   L       V  ALL M+ +CG +  A  +F+G+  +NV+ W+A+I G++Q    E+
Sbjct: 300 RHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEE 359

Query: 303 PLRLVCLMREDG------IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            LRL   M  +G      + PN  T    +A+C+ L  S    M H   +  G+     +
Sbjct: 360 ALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARI 419

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            +A++DM +  G+I   ++   EM +S  + VSW++ I     + + + A+E FS+M   
Sbjct: 420 ASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTG 479

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV--HVGSSLIEAYNKCGSWE 473
               +E TY S+L ACS    +   +   + + K    S    H  + L++   + G  +
Sbjct: 480 GYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY-ACLVDLLGRAGHLD 538

Query: 474 DAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +A  V   +   AD+  W S++ A   +G  +   I+ +K++
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKIL 580



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN+ IA     Q  + A+  F++M  +    + FT+ ++LKAC+ L  L    Q+H+ + 
Sbjct: 21  WNSLIAKN-ATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--TAADVVSWNSMIKAYSQNGRARKA 506
           +    ++    ++L++AY KCG    A +VF ++   + DVVSW ++I AYS NG   +A
Sbjct: 80  RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139

Query: 507 IILFEKM 513
              F +M
Sbjct: 140 FKAFGRM 146



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 4/184 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM- 178
           ++ V++ CSR          H     T +  D  + ++L++M AKCGDI+    V  +M 
Sbjct: 385 LVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMD 444

Query: 179 -PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
                + S + ++     +    +A   F ++     +PN  TY ++L+ C     +++G
Sbjct: 445 ESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQG 504

Query: 238 KQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFK 295
           K       K   +S T    A L+ +  + G +++A +V   + ++ ++  W +++    
Sbjct: 505 KSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACH 564

Query: 296 QHGD 299
            HG+
Sbjct: 565 LHGN 568


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 226/729 (31%), Positives = 361/729 (49%), Gaps = 33/729 (4%)

Query: 22  VVEQVKPKKCNHRKTVEVKEPFASYSAC-----QLFNKSPKRAGLSTSDLIFNGYMNIEE 76
           V    K  K NH K V       S+  C      L N   K     ++D +F+       
Sbjct: 66  VQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDK------ 119

Query: 77  KGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECL 133
             +S++   T N S   G++     + V +       L   LDK      L+ CS+   L
Sbjct: 120 --MSKSNIVTYN-SLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
             G+  H LI    +     +T SL++MY+KCG +     +      LD  S N L+AGY
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS-LSAIDE-GKQLHAQTMKLQYLS 251
            +N  +++  +   K+    +  N YT  + L  C S  +     G  LH   +KL    
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL 296

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE-----KPLRL 306
              V  ALL MY K G ++DA  +F+ +V +NV+ + A++ G  Q    E     K L L
Sbjct: 297 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 356

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M+  GI P+ +T++  L +C  + +       HA + K G+   +++G+ ++D+YS 
Sbjct: 357 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 416

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
           LG + +A      +  + + V   A I G+ +N + E A+  F +++  +   DEF  S+
Sbjct: 417 LGSMMDALLCFNSI-HNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXST 475

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           I+ +C+ +  L + EQI     K          +S I  Y K G    A   F Q+   D
Sbjct: 476 IMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPD 535

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +VSW++MI + +Q+G A +A+  FE M   GI P +  FL VL ACSH GLV++G + F+
Sbjct: 536 IVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFD 595

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +M K+Y +     H  C+VDLLGRAG+L  A   I  L  +    +WR L +ACR H D 
Sbjct: 596 TMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDT 655

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
             A+ ++++++EL+P  +A YV L N+Y +AG +  A + R LM+ + I KEPG SWI++
Sbjct: 656 VTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQI 715

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVLYHSERL 718
            +K+Y F S ++SH    ++Y KL +++   + +           ++E    V YHSE+L
Sbjct: 716 GDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKL 775

Query: 719 AVGFGLISL 727
           AV FG++ L
Sbjct: 776 AVAFGVLYL 784



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 233/443 (52%), Gaps = 8/443 (1%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           YS   LL+    ++++   ++   L  G+  H+ + KT+     F+  +L+NMY KCGD 
Sbjct: 51  YSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDT 110

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           +S   +  +M   +I + N L++GY + +  D+    F K   + ++ + YT +  L  C
Sbjct: 111 RSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTAC 170

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
                +  GK +H   +     S+  ++N+L+ MY KCG ++ A  +F+   + + +SW 
Sbjct: 171 SQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWN 230

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS--HMGYMFHAQVI 346
           ++I G+ Q+G YE+ L ++  M ++G+  N YT   AL +C+S  N     G M H   I
Sbjct: 231 SLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAI 290

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE-- 404
           K G+ L   VGTA++DMY+  G + +A +   +M    + V +NA +AG  + +  E+  
Sbjct: 291 KLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQETIEDKC 349

Query: 405 ---AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
              A+  F +M         FTYSS+LKAC ++      +Q+H+ + K+   S+ ++GS 
Sbjct: 350 AYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSI 409

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI+ Y+  GS  DA   F+ +    +V   +MI  Y QNG    A+ LF +++    +P 
Sbjct: 410 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPD 469

Query: 522 NSTFLAVLSACSHSGLVQDGQKV 544
                 ++S+C++ G+++ G+++
Sbjct: 470 EFIXSTIMSSCANMGMLRSGEQI 492


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 193/610 (31%), Positives = 320/610 (52%), Gaps = 14/610 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +R H  + K        V  SL+  Y KCG+++S   +  ++   D+ S N +++G   N
Sbjct: 178 KRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMN 237

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                   FF+++  + V  +  T   +L  C ++  +  G+ LHA  +K  +      +
Sbjct: 238 GFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFN 297

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N LL MY KCG +  A  VF  + +  ++SWT+II    + G + + + L   M+  G+ 
Sbjct: 298 NTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLR 357

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+ Y  T  + +CA   +   G   H  + K  M     V  A+++MY+  G + EA   
Sbjct: 358 PDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLI 417

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             ++    + VSWN  I G+ +N    EA++ F  M +     D+ T + +L AC+ L +
Sbjct: 418 FSQL-PVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAA 475

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L    +IH  I++  + S++HV  +L++ Y KCG    A+++F  +   D++ W  MI  
Sbjct: 476 LEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAG 535

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  ++AI  FEKM V GI P  S+F ++L AC+HSGL+++G K+F+SM  E  I P
Sbjct: 536 YGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEP 595

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           +  HY+CMVDLL R+G L  A  FI  +PIKP A IW  L + CR H D+++AE +++ I
Sbjct: 596 KLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHI 655

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            EL+P++   YV L+N+YAEA    + ++ ++ +    +  + GCSWIEV  K   FF+ 
Sbjct: 656 FELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAG 715

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           + SH +   +   L++L  ++   G++           D  KE  +  HSE+LA+   + 
Sbjct: 716 DTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM-LQVD 774

Query: 726 SLPAKNKFEC 735
           + P   K  C
Sbjct: 775 ATPHTKKVTC 784



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 270/527 (51%), Gaps = 8/527 (1%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + +   S  S L+      VL  C+  + LE G+R H++I+   +  D+ + A LV M
Sbjct: 42  NAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFM 101

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           Y  CGD+     +   +    I   N L++ YAK   + ++   F K+  + ++ + YT+
Sbjct: 102 YVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTF 161

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           + +L    + + + E K++H   +KL + S  AV N+L+  Y KCG +E A  +F+ L  
Sbjct: 162 TCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD 221

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+V+SW ++I+G   +G     L     M   G+D +  T    L +CA++ N  +G   
Sbjct: 222 RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRAL 281

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA  +K G + G      ++DMYS  G +  A +   +MG++ + VSW + IA   R   
Sbjct: 282 HAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGET-TIVSWTSIIAAHVREGL 340

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EAI  F +M       D +  +S++ AC+   SL    ++H+ I K+   SN+ V ++
Sbjct: 341 HYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNA 400

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L+  Y KCGS E+A  +FSQL   ++VSWN+MI  YSQN    +A+ LF  M  + ++P 
Sbjct: 401 LMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPD 459

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIF 580
           + T   VL AC+    ++ G+++   ++++ G    + H +C +VD+  + G L +A   
Sbjct: 460 DVTMACVLPACAGLAALEKGREIHGHILRK-GYFS-DLHVACALVDMYVKCGLLVLAQQL 517

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLK--MAEFISKQILELDPDDAA 625
              +P K    +W  + A    H   K  ++ F   ++  ++P++++
Sbjct: 518 FDMIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESS 563



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 204/448 (45%), Gaps = 40/448 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   ++ VL  C+    L LGR  HA   K    G      +L++MY+KCG++     V
Sbjct: 257 VDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEV 316

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M    I S   ++A + +  L  +A   F ++    ++P+ Y  ++++  C   +++
Sbjct: 317 FVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSL 376

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D+G+++H    K    S   VSNAL+ MY KCG ME+A  +F  L  +N++SW  +I G+
Sbjct: 377 DKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGY 436

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+    + L+L   M++  + P++ T    L +CA L     G   H  ++++G     
Sbjct: 437 SQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDL 495

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  A+VDMY   G +  A +QL +M      + W   IAG+  +   +EAI  F +M  
Sbjct: 496 HVACALVDMYVKCGLLVLA-QQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRV 554

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                +E +++SIL AC+           HS ++K                      W+ 
Sbjct: 555 AGIEPEESSFTSILYACT-----------HSGLLKE--------------------GWKL 583

Query: 475 AERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            + + S+      +  +  M+    ++G   +A    E M    I+P  + + A+LS C 
Sbjct: 584 FDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMP---IKPDAAIWGALLSGCR 640

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHY 561
               V+  +KV E +   + + PE   Y
Sbjct: 641 IHHDVELAEKVAEHI---FELEPENTRY 665



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    LE GR  H  I +     D  V  +LV+MY KCG +     +   +P  D
Sbjct: 466 VLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKD 525

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +     ++AGY  +    +A S F K+    ++P   +++++L  C     + EG +L  
Sbjct: 526 MILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLF- 584

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
            +MK +   +  + +   ++ + I+ G +  A    E + ++ +   W A+++G + H D
Sbjct: 585 DSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHD 644

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            E   ++   + E  ++P    + V LA+
Sbjct: 645 VELAEKVAEHIFE--LEPENTRYYVLLAN 671


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 206/664 (31%), Positives = 340/664 (51%), Gaps = 49/664 (7%)

Query: 120  VIEVLSYCSR-EECLELGRRYHALITKTAVCGD--QFVTASLVNMYAKCGDIKSMVAVVK 176
            ++ V   CS     + LG++ HA   +    GD   +   +LV MYA+ G +    A+  
Sbjct: 436  LVSVAHACSHVRGGVRLGKQVHAYTLRN---GDLRTYTNNALVTMYARLGRVNDAKALFG 492

Query: 177  QMPYLDIASCNCLLAGYAKNALFDQA--FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
                 D+ S N +++  ++N  F++A  + + + +DG  V+P+  T +++L  C  L  +
Sbjct: 493  VFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDG--VRPDGVTLASVLPACSQLERL 550

Query: 235  DEGKQLHAQTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G+++H   ++    +  + V  AL+ MY  C   +    VF+G+V+R V  W A++ G
Sbjct: 551  RIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAG 610

Query: 294  FKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + ++   ++ LRL V ++ E    PN  TF   L +C   +        H  ++KRG   
Sbjct: 611  YARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK 670

Query: 353  GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              +V  A++DMYS +G +  +K     M K    VSWN  I G     + ++A+    +M
Sbjct: 671  DKYVQNALMDMYSRMGRVEISKTIFGRMNKR-DIVSWNTMITGCIVCGRYDDALNLLHEM 729

Query: 413  VRNDA--ACDEF----------------TYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
             R       D F                T  ++L  C+ L +L   ++IH+  VK K   
Sbjct: 730  QRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAM 789

Query: 455  NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            +V VGS+L++ Y KCG    A RVF Q+   +V++WN +I AY  +G+  +A+ LF  M 
Sbjct: 790  DVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMT 849

Query: 515  VEG------IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
              G      IRP   T++A+ +ACSHSG+V +G  +F +M   +G+ P   HY+C+VDLL
Sbjct: 850  AGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLL 909

Query: 569  GRAGKLEIALIFISNLPIKPT-APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
            GR+G+++ A   I+ +P        W  L  ACR H  ++  E  +K +  L+P+ A+ Y
Sbjct: 910  GRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHY 969

Query: 628  VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
            V +SN+Y+ AGL   A   RK MK   + KEPGCSWIE  +++++F S + SH +  +++
Sbjct: 970  VLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELH 1029

Query: 688  EKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECS 736
            E L+ L Q++   G+            D EKE  +  HSERLA+ FGL++ P       +
Sbjct: 1030 EYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVA 1089

Query: 737  RTLE 740
            + L 
Sbjct: 1090 KNLR 1093



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 240/493 (48%), Gaps = 27/493 (5%)

Query: 135 LGRRYHALITK--TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LG++ HA + K   A      V  SLVNMY KCGD+ +   V   +P  D  S N ++A 
Sbjct: 348 LGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIAT 407

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAIDEGKQLHAQTMKLQYLS 251
             +   ++ +   F  +   +V P  +T  ++   C  +   +  GKQ+HA T++   L 
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDL- 466

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
           +T  +NAL+TMY + G + DA+++F     ++++SW  +I+   Q+  +E+ L  V LM 
Sbjct: 467 RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI 526

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGLGEI 370
            DG+ P+  T    L +C+ L    +G   H   ++ G +    FVGTA+VDMY    + 
Sbjct: 527 VDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSILK 429
            + +     + +   +V WNA +AG+ RN+  ++A+  F +M+     C +  T++S+L 
Sbjct: 587 KKGRLVFDGVVRRTVAV-WNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLP 645

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC      +  E IH  IVK  F  + +V ++L++ Y++ G  E ++ +F ++   D+VS
Sbjct: 646 ACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVS 705

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVE----------------GI--RPTNSTFLAVLSA 531
           WN+MI      GR   A+ L  +M                   G+  +P + T + VL  
Sbjct: 706 WNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPG 765

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C+    +  G+++    VK+  +  + A  S +VD+  + G L +A      +PI+    
Sbjct: 766 CAALAALGKGKEIHAYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVI 823

Query: 592 IWRPLFAACRCHS 604
            W  L  A   H 
Sbjct: 824 TWNVLIMAYGMHG 836



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 198/417 (47%), Gaps = 9/417 (2%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           LL     ++ F  A S +  +      P+++ +  +L    ++  +  GKQ+HA   K  
Sbjct: 301 LLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG 360

Query: 249 YL--SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           +   S  AV+N+L+ MY KCG +  A  VF+ +  R+ +SW ++I    +  ++E  L L
Sbjct: 361 HAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHL 420

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
             LM  + +DP  +T      +C+ +R    +G   HA  ++ G  L  +   A+V MY+
Sbjct: 421 FRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYA 479

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            LG + +A K L  +      VSWN  I+   +N + EEA+     M+ +    D  T +
Sbjct: 480 RLGRVNDA-KALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLA 538

Query: 426 SILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           S+L ACS L  L    +IH   +++     N  VG++L++ Y  C   +    VF  +  
Sbjct: 539 SVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVR 598

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQK 543
             V  WN+++  Y++N    +A+ LF +M+ E    P  +TF +VL AC    +  D + 
Sbjct: 599 RTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEG 658

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           +   +VK  G   ++   + ++D+  R G++EI+      +  +     W  +   C
Sbjct: 659 IHGYIVKR-GFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVS-WNTMITGC 713


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 213/639 (33%), Positives = 331/639 (51%), Gaps = 44/639 (6%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNA 197
           HA +T+  +  D+F  A+LV+ Y KCG       V  +MP   +D+ S   L++ Y+ N 
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 198 LFDQAFSFFLKLD-----------GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             D+AF  F ++            G+DV       S     CGS + +  G  +H   +K
Sbjct: 135 CVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGS-NCLRRGSAVHGLVVK 193

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPL 304
             +   T + N+++ MY  C  +  A  VF G+   QR+V+SW ++I+GF  +G+ E+ L
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERAL 253

Query: 305 RLVCLMREDG---IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL----GDFVG 357
           R    M  +G   ++PN  T    L SCA L         H  +  R  +L       V 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM----- 412
           TA++DM++  G +  A++    + +  + V W+A IAG+ +    EEA+  F QM     
Sbjct: 314 TALLDMHARCGNLALAREIFDGV-EGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGN 372

Query: 413 -VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
            V  +   +  T  S++ ACS L +  +   IH   V +  + +  + S+LI+   KCG 
Sbjct: 373 MVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGD 432

Query: 472 WEDAERVFSQL--TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            E   +VFS++  +   VVSW+SMI A   +G  ++A+ LF +M   G  P   T+++VL
Sbjct: 433 IEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVL 492

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           SACSH+GLV+ G+  F SM K+YG+ P   HY+C+VDLLGRAG L+ A   I N+PIK  
Sbjct: 493 SACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKAD 552

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L AAC  H + K+ E + K+IL LD +    +V L+NMY +AG   D    R  
Sbjct: 553 LALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVE 612

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED----IGHTDN 705
           ++   + K PG S+IE+ N++Y F ++++SH E   +Y++L  L +++      +  T  
Sbjct: 613 LRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGL 672

Query: 706 EKED--------RVLYHSERLAVGFGLISLPAKNKFECS 736
             ED        R  YHSERLA+ FGLI +   +   CS
Sbjct: 673 NVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCS 711



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 224/481 (46%), Gaps = 41/481 (8%)

Query: 194 AKNALFD--QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           AKNA  +   A +FF ++    V  N++T+  +L  C +L  +    Q+HA   +L   +
Sbjct: 26  AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAA 85

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQR--NVISWTAIINGFKQHGDYEKPLRLVCL 309
               + AL+  Y KCG    A  VF+ + +   +V+SWTA+I+ +  +G  ++       
Sbjct: 86  DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGR 145

Query: 310 MR-EDGIDPNE------YTFTVALASCASLRNSH---MGYMFHAQVIKRGMALGDFVGTA 359
           MR   G D +E       +    +++CA    S+    G   H  V+K G  +   +G +
Sbjct: 146 MRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNS 205

Query: 360 IVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +V MYS   ++  A +    +  +    VSWN+ I+GF  N + E A+  F  MV    +
Sbjct: 206 MVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTS 265

Query: 419 CDE---FTYSSILKACSLLPSLATCEQIHSRIVKSKFES-----NVHVGSSLIEAYNKCG 470
             E    T  ++LK+C+ L  + T   +H  I  S+  S     +V V ++L++ + +CG
Sbjct: 266 AVEPNRVTVIALLKSCAELGCVETSSWVHEYI-SSRHSSLLVAKDVVVLTALLDMHARCG 324

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG------IRPTNST 524
           +   A  +F  +   +VV W++MI  Y Q     +A+ LF +M++EG      ++P   T
Sbjct: 325 NLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVT 384

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGI---LPEEAHY-SCMVDLLGRAGKLEIALIF 580
            ++V++ACS  G  +       SM+ +Y +   L ++A   S ++D+  + G +E     
Sbjct: 385 LVSVIAACSRLGASRSA-----SMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQV 439

Query: 581 ISNLPIKP-TAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAG 638
            S +     T   W  +  A   H + K A E  S+        +   Y+++ +  + AG
Sbjct: 440 FSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAG 499

Query: 639 L 639
           L
Sbjct: 500 L 500



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 186/402 (46%), Gaps = 20/402 (4%)

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCL 189
           CL  G   H L+ K        +  S+V+MY+ C D+     V   +P    D+ S N L
Sbjct: 180 CLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSL 239

Query: 190 LAGYAKNALFDQAFSFFLKL--DGID-VQPNHYTYSTMLAICGSLSAIDEGKQLH----A 242
           ++G+  N   ++A   F  +  +G   V+PN  T   +L  C  L  ++    +H    +
Sbjct: 240 ISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISS 299

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +   L       V  ALL M+ +CG +  A  +F+G+  +NV+ W+A+I G++Q    E+
Sbjct: 300 RHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEE 359

Query: 303 PLRLVCLMREDG------IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            LRL   M  +G      + PN  T    +A+C+ L  S    M H   +  G+     +
Sbjct: 360 ALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARI 419

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            +A++DM +  G+I   ++   EM +S  + VSW++ I     + + + A+E FS+M   
Sbjct: 420 ASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTG 479

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV--HVGSSLIEAYNKCGSWE 473
               +E TY S+L ACS    +   +   + + K    S    H  + L++   + G  +
Sbjct: 480 GYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHY-ACLVDLLGRAGHLD 538

Query: 474 DAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +A  V   +   AD+  W S++ A   +G  +   I+ +K++
Sbjct: 539 EAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKIL 580



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 3/127 (2%)

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN+ IA     Q  + A+  F++M  +    + FT+ ++LKAC+ L  L    Q+H+ + 
Sbjct: 21  WNSLIAKN-ATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--TAADVVSWNSMIKAYSQNGRARKA 506
           +    ++    ++L++AY KCG    A +VF ++   + DVVSW ++I AYS NG   +A
Sbjct: 80  RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139

Query: 507 IILFEKM 513
              F +M
Sbjct: 140 FXAFGRM 146



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 4/184 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM- 178
           ++ V++ CSR          H     T +  D  + ++L++M AKCGDI+    V  +M 
Sbjct: 385 LVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMD 444

Query: 179 -PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
                + S + ++     +    +A   F ++     +PN  TY ++L+ C     +++G
Sbjct: 445 ESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQG 504

Query: 238 KQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFK 295
           K       K   +S T    A L+ +  + G +++A +V   + ++ ++  W +++    
Sbjct: 505 KSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACH 564

Query: 296 QHGD 299
            HG+
Sbjct: 565 LHGN 568


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 208/628 (33%), Positives = 334/628 (53%), Gaps = 17/628 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C       +GR  HA + +     +  V  +LV MYAKCGDI +   V   M   D
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+ +N   +     FL +   +VQPN  T +++    G LS +   K++H 
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +    A  N+L+ MY   G M DA  +F  +  ++ +SWTA+I+G++++G  +K
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +  LM    + P++ T   ALA+CA L    +G   H     +G      V  A+++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A +  K M +    VSW++ IAGF  N ++ EA+  F  M+      +  
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSV 500

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ + L AC+   +L + ++IH+ +++    S  +V ++L++ Y KCG    A   FS  
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVH 560

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  DVVSWN M+  +  +G    A+ LF +MV  G  P   TF+A+L ACS +G+V  G 
Sbjct: 561 SEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGW 620

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++F  M +++ I+P   HY+CMVDLL R GKL  A   I+ +PIKP A +W  L   CR 
Sbjct: 621 ELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRI 680

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  +++ E  +K ILEL+P+D A +V L ++Y +AG  A     RK M+ K + ++ GCS
Sbjct: 681 HRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCS 740

Query: 663 WIEVYNKIYRFFSQNKSHSEMPK-------VYEKLKQL-MQQIEDIGHTDNEKEDRVLYH 714
           W+EV    + F + ++SH ++ +       +YE++K      +E +   +  ++D +  H
Sbjct: 741 WVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGH 800

Query: 715 SERLAVGFGLISLP-------AKNKFEC 735
           SERLAV FGLI+          KN++ C
Sbjct: 801 SERLAVAFGLINTTPGTTISVTKNRYTC 828



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 246/498 (49%), Gaps = 5/498 (1%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++++M  + G+I     V  +MP  D+ S N ++ GY K    ++A   + ++    ++P
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + YT+  +L  CG +     G+++HA  ++  +  +  V NAL+TMY KCG +  A  VF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           +G+   + ISW A+I G  ++ + E  L L   M E+ + PN  T T    +   L    
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                H   +KRG A+      +++ MY+ LG + +A K    M ++  ++SW A I+G+
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTAMISGY 374

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N   ++A+E ++ M  ++ + D+ T +S L AC+ L  L    ++H       F   V
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L+E Y K    + A  VF  +   DVVSW+SMI  +  N R+ +A+  F  M+  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH 494

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            ++P + TF+A LSAC+ +G ++ G+++  + V   GI  E    + ++DL  + G+   
Sbjct: 495 -VKPNSVTFIAALSACAATGALRSGKEI-HAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL-DPDDAAVYVTLSNMYA 635
           A    S    K     W  + +    H    +A  +  Q++E+ +  D   +V L    +
Sbjct: 553 AWAQFSVHSEKDVVS-WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611

Query: 636 EAGLQADAEEQRKLMKMK 653
            AG+     E   +M  K
Sbjct: 612 RAGMVIQGWELFHMMTEK 629



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 204/437 (46%), Gaps = 4/437 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+   Y  +  +C    A+D G +  A+           + NA+L+M ++ G +  A  V
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  + +R+V SW  ++ G+ + G  E+ L L   M   G+ P+ YTF   L +C  + + 
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            MG   HA V++ G      V  A+V MY+  G+I  A+K    M  +   +SWNA IAG
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT-DCISWNAMIAG 272

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            F N + E  +E F  M+ N+   +  T +S+  A  +L  +   +++H   VK  F  +
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V   +SLI+ Y   G   DA ++FS++   D +SW +MI  Y +NG   KA+ ++  M +
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T  + L+AC+  G +  G K+ E + +  G +      + ++++  ++  ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 576 IALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
            A+     +  K     W  + A  C  H   +   +    +  + P+       LS   
Sbjct: 452 KAIEVFKFMAEKDVVS-WSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACA 510

Query: 635 AEAGLQADAEEQRKLMK 651
           A   L++  E    +++
Sbjct: 511 ATGALRSGKEIHAYVLR 527



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I  LS C+    L  G+  HA + +  +  + +V  +L+++Y KCG      A       
Sbjct: 503 IAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE 562

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N +L+G+  + L D A S F ++  +   P+  T+  +L  C     + +G +L
Sbjct: 563 KDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWEL 622

Query: 241 -HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
            H  T K   +        ++ +  + G + +A ++   + ++ +   W A++NG + H 
Sbjct: 623 FHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHR 682

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             E       ++ E  ++PN+  + V L
Sbjct: 683 HVELGELAAKVILE--LEPNDVAYHVLL 708


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 201/620 (32%), Positives = 324/620 (52%), Gaps = 27/620 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C     L +G++ H  + K     D +V   L++MY K G I+    V  +MP  D
Sbjct: 130 VIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRD 189

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++GY  +     +   F ++  +  + + +   + L  C     +  G ++H 
Sbjct: 190 LVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHC 249

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q ++ +      V  +L+ MY KCG ++ AE VF  +  +N+++W A+I G ++      
Sbjct: 250 QVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE------ 303

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                    +D + P+  T    L SC+       G   H   I++       + TA+VD
Sbjct: 304 ---------DDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVD 354

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   GE+  A+    +M +  + VSWN  +A + +N++ +EA++ F  ++      D  
Sbjct: 355 MYGKCGELKLAEHVFNQMNEK-NMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAI 413

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L A + L S +  +QIHS I+K    SN  + ++++  Y KCG  + A   F  +
Sbjct: 414 TIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGM 473

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN+MI AY+ +G  R +I  F +M  +G +P  STF+++L+ACS SGL+ +G 
Sbjct: 474 VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGW 533

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F SM  EYGI P   HY CM+DLLGR G L+ A  FI  +P+ PTA IW  L AA R 
Sbjct: 534 GFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRN 593

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H+D+ +AE  ++ IL L  D+   YV LSNMYAEAG   D +  + LMK + + K  GCS
Sbjct: 594 HNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCS 653

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL---------- 712
            +++  +   F +Q++SH+    +Y+ L  L+++I +  +  +  + R L          
Sbjct: 654 MVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSP 713

Query: 713 -YHSERLAVGFGLISLPAKN 731
            YHS +LA+ FGLIS    N
Sbjct: 714 EYHSVKLAICFGLISTAIGN 733



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 257/522 (49%), Gaps = 23/522 (4%)

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           + + G + + + + ++M + D    N ++ GY  N LF +A  F+ +++   ++ +++T+
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
             ++  CG L A+  G+++H + +K+ +     V N L+ MY+K G +E AE VF+ +  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+++SW ++++G++  GD    L     M   G   + +    AL +C+       G   
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H QVI+  + L   V T+++DMY   G++  A++    +  S + V+WNA I G    Q+
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRI-YSKNIVAWNAMIGGM---QE 303

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            ++ I             D  T  ++L +CS   +L   + IH   ++  F   + + ++
Sbjct: 304 DDKVIP------------DVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETA 351

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y KCG  + AE VF+Q+   ++VSWN+M+ AY QN + ++A+ +F+ ++ E ++P 
Sbjct: 352 LVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPD 411

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T  +VL A +      +G+++  S + + G+       + +V +  + G L+ A  F 
Sbjct: 412 AITIASVLPAVAELASRSEGKQI-HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFF 470

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
             +  K     W  +  A   H   + + +F S+   +    + + +V+L    + +GL 
Sbjct: 471 DGMVCKDVVS-WNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLI 529

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
            +       MK+ E   +PG   IE Y  +     +N +  E
Sbjct: 530 DEGWGFFNSMKV-EYGIDPG---IEHYGCMLDLLGRNGNLDE 567



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 16/318 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +I  L  CS E CL  G   H  + ++ +  D  V  SL++MY KCG +     V 
Sbjct: 224 DRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVF 283

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++   +I + N ++ G  ++                 V P+  T   +L  C    A+ 
Sbjct: 284 NRIYSKNIVAWNAMIGGMQEDD---------------KVIPDVITMINLLPSCSQSGALL 328

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EGK +H   ++  +L    +  AL+ MY KCG ++ AE VF  + ++N++SW  ++  + 
Sbjct: 329 EGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYV 388

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+  Y++ L++   +  + + P+  T    L + A L +   G   H+ ++K G+    F
Sbjct: 389 QNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTF 448

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  AIV MY+  G++  A++    M      VSWN  I  +  +     +I+ FS+M   
Sbjct: 449 ISNAIVYMYAKCGDLQTAREFFDGM-VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGK 507

Query: 416 DAACDEFTYSSILKACSL 433
               +  T+ S+L ACS+
Sbjct: 508 GFKPNGSTFVSLLTACSI 525



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 39/361 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I +L  CS+   L  G+  H    +        +  +LV+MY KCG++K    V  QM 
Sbjct: 314 MINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMN 373

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N ++A Y +N  + +A   F  +    ++P+  T +++L     L++  EGKQ
Sbjct: 374 EKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQ 433

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H+  MKL   S T +SNA++ MY KCG ++ A   F+G+V ++V+SW  +I  +  HG 
Sbjct: 434 IHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGF 493

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVG 357
               ++    MR  G  PN  TF   L +C  + L +   G+ F++  ++ G+  G    
Sbjct: 494 GRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGF-FNSMKVEYGIDPGIEHY 552

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             ++D+    G + EAK  ++EM    ++  W + +A   RN               ND 
Sbjct: 553 GCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAA-SRNH--------------NDV 597

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
              E     IL   SL      C  + S +                  Y + G WED +R
Sbjct: 598 VLAELAARHIL---SLKHDNTGCYVLLSNM------------------YAEAGRWEDVDR 636

Query: 478 V 478
           +
Sbjct: 637 I 637


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 193/532 (36%), Positives = 304/532 (57%), Gaps = 14/532 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y T+L  C S  AI EG+++H   +K  YL    +   L+ +Y KC  + DA  +F+ + 
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           Q+NV+SWTA+I+ + Q G   + L L   M     +PN +TF   L SC        G  
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H+  IKR      FVG++++DMY+  G I +A      + +    V+  A I+G+ +  
Sbjct: 213 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER-DVVACTAIISGYAQMG 271

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             EEA++ F Q+       +  TY+S+L A S L +L   +Q+HS +++S   S V + +
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IR 519
           SLI+ Y+KCG+   A R+F  +     +SWN+M+  YS++G AR+ + LF+ M  E  ++
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 391

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           P + T+LAVLS CSH  L   G ++F +MV  + GI P+  HY C+VDLLGRAG++E A 
Sbjct: 392 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 451

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
            FI  +P  PTA IW  L  +CR HSD+++   + +++LEL+P++A  YV LSN+YA AG
Sbjct: 452 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 511

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              D    R LM+ K ++KEPG SW+E+   ++ F + + +H    +V +K+K+L  + +
Sbjct: 512 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 571

Query: 699 DIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
           + G+           D E++++VL  HSE+LA+ FGLI+ P        + L
Sbjct: 572 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNL 623



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 214/459 (46%), Gaps = 46/459 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C  +  +  G+R H  + KT      ++   L+ +Y KC  +     +  +MP  +
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKN 155

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++ Y++     +A + F+++   D +PNH+T++T+L  C      + G+Q+H+
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  Y S   V ++LL MY K G + DA  VF  L +R+V++ TAII+G+ Q G  E+
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L   ++ +G++ N  T+   L + + L   + G   H+ V++ G      +  +++D
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDE 421
           MYS  G +  A++    M +  + +SWNA + G+ ++    E +E F  M   N    D 
Sbjct: 336 MYSKCGNVCYARRIFDSMPER-TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 394

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            TY ++L  CS           H ++     E            YN     +  E     
Sbjct: 395 ITYLAVLSGCS-----------HGQLEDMGLEI----------FYNMVNGKDGIE----- 428

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS-HSGL--- 537
               D+  +  ++    + GR  +A    +KM      PT + + ++L +C  HS +   
Sbjct: 429 ---PDIGHYGCVVDLLGRAGRVEEAFDFIKKM---PFVPTAAIWGSLLGSCRVHSDVEIG 482

Query: 538 VQDGQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGKLE 575
           +  GQK+ E       + PE A +Y  + +L   AGK E
Sbjct: 483 IIVGQKLLE-------LEPENAGNYVILSNLYASAGKWE 514


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 205/596 (34%), Positives = 328/596 (55%), Gaps = 27/596 (4%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F   +L+N YAK   I     V  ++P  DI S N L+A YA       A   F ++  +
Sbjct: 76  FSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVREL 135

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               + +T S ++  CG     D G  +QLH   +   Y    +V+NA+L  Y + G + 
Sbjct: 136 RFGLDGFTLSGVIIACGD----DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLN 191

Query: 271 DAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
           +A  VF  + +   R+ +SW A+I    QH +  + + L   M   G+  + +T    L 
Sbjct: 192 EARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLT 251

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL-GEIWEAKKQLKEMGKSASS 386
           +   +++   G  FH  +IK G      VG+ ++D+YS   G + E +K  +E+  +   
Sbjct: 252 AFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA-APDL 310

Query: 387 VSWNAQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           V WN  I+GF + +  +E+ I  F +M  N    D+ ++  +  ACS L S +  +Q+H+
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370

Query: 446 RIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +KS    N V V ++L+  Y+KCG+  DA RVF  +   ++VS NSMI  Y+Q+G   
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +++ LFE M+ + I P   TF+AVLSAC H+G V++GQK F  M + + I PE  HYSCM
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           +DLLGRAGKL+ A   I  +P  P +  W  L  ACR H ++++A   + + L+L+P +A
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           A YV LSNMYA A    +A   ++LM+ + + K+PGCSWIE+  K++ F +++ SH  + 
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIK 610

Query: 685 KVYEKLKQLMQQIEDIGHT--------------DNEKEDRVLYHSERLAVGFGLIS 726
           +++  + +++++++  G+                +EKE R+LYHSE+LAV FGLIS
Sbjct: 611 EIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLIS 666



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 168/366 (45%), Gaps = 37/366 (10%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+  +L  C +   +  GK LHA   K      T +SN    +Y KCG + +A++ F+  
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 280 VQRNVISWTAIINGFKQH-------------------------------GDYEKPLRLVC 308
              NV S+  +IN + +H                               G+    LRL  
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            +RE     + +T +  + +C    +  +    H  V+  G      V  A++  YS  G
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 369 EIWEAKKQLKEMGKSAS--SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            + EA++  +EMG+      VSWNA I    ++++  EA+E F +MVR     D FT +S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFSQLTAA 485
           +L A + +  L    Q H  ++KS F  N HVGS LI+ Y+KC G   +  +VF ++ A 
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 486 DVVSWNSMIKAYSQ-NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           D+V WN+MI  +SQ    +   I  F +M   G  P + +F+ V SACS+      G++V
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 545 FESMVK 550
               +K
Sbjct: 369 HALAIK 374



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 149/284 (52%), Gaps = 6/284 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           G ++H ++ K+   G+  V + L+++Y+KC G +     V +++   D+   N +++G++
Sbjct: 262 GMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFS 321

Query: 195 K-NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK--LQYLS 251
           +   L +     F ++      P+  ++  + + C +LS+   GKQ+HA  +K  + Y +
Sbjct: 322 QYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPY-N 380

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
           + +V+NAL+ MY KCG + DA  VF+ + + N++S  ++I G+ QHG   + LRL  LM 
Sbjct: 381 RVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELML 440

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEI 370
           +  I PN  TF   L++C        G  +   + +R     +    + ++D+    G++
Sbjct: 441 QKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKL 500

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            EA++ ++ M  +  S+ W   +    ++   E A++A ++ ++
Sbjct: 501 KEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQ 544



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 6/190 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAV 174
           D  FV  V S CS      +G++ HAL  K+ +  ++  V  +LV MY+KCG++     V
Sbjct: 346 DCSFVC-VTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRV 404

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP  ++ S N ++AGYA++ +  ++   F  +   D+ PN  T+  +L+ C     +
Sbjct: 405 FDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKV 464

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG Q +   MK ++  +    +   ++ +  + G +++AE + E +      I W  ++
Sbjct: 465 EEG-QKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523

Query: 292 NGFKQHGDYE 301
              ++HG+ E
Sbjct: 524 GACRKHGNVE 533


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 206/640 (32%), Positives = 343/640 (53%), Gaps = 54/640 (8%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVV---KQMPYLDIASCNCLLA 191
           ++ H+LI KT +    FV + L++  A    GD+   +++    +Q    ++   N L+ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL---- 247
           GY+ ++    +   F ++    VQPN +T+  +   C    A  EGKQLHA  +KL    
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 248 ----------QYLS----------------KTAVS-NALLTMYIKCGMMEDAESVFEGLV 280
                      Y S                + AVS  AL+T Y+  G ++DA  +F+ + 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            ++V+SW A+I+G+ Q G +E+ +     M+E  + PN+ T  V L++C   R+  +G  
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
             + V   G      +  A++DMY   GE  +  ++L +  +    +SWN  I G+    
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGET-DIARELFDGIEEKDVISWNTMIGGYSYLS 343

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVG 459
             EEA+  F  M+R++   ++ T+  IL AC+ L +L   + +H+ I K+ +  SN  + 
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW 403

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI- 518
           +SLI+ Y KCG  E AERVF  + + ++ SWN+M+  ++ +G A +A+ LF +MV +G+ 
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           RP + TF+ VLSAC+ +GLV  G + F SM+++YGI P+  HY CM+DLL RA K E A 
Sbjct: 464 RPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAE 523

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
           I + N+ ++P   IW  L +AC+ H  ++  E++++++ +L+P++A  +V LSN+YA AG
Sbjct: 524 ILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAG 583

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              D    R  +  K + K PGC+ IE+   ++ F   +K H E   +Y+ L ++ + +E
Sbjct: 584 RWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLE 643

Query: 699 DIGHTDNEKEDRVLY-------------HSERLAVGFGLI 725
           + G   N  E  VLY             HSE+LA+ FGLI
Sbjct: 644 ENGFVPNTSE--VLYDMDEEWKEGALSQHSEKLAISFGLI 681



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 203/461 (44%), Gaps = 47/461 (10%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM--YIKCGMMEDAESVF 276
           + Y  +L  C +++     KQ+H+  +K    +   V + L+        G +  A S+F
Sbjct: 29  HPYLNLLEKCKNINTF---KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLF 85

Query: 277 EGLVQR---NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           E   Q    NV  W ++I G+         L L   M   G+ PN +TF     SC   +
Sbjct: 86  EENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAK 145

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK------------------- 374
            +H G   HA  +K  +     V T+++ MY+ +GE+  A+                   
Sbjct: 146 ATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALIT 205

Query: 375 -----------KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
                      ++L +       VSWNA I+G+ ++ + EEAI  F +M   +   ++ T
Sbjct: 206 GYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKST 265

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
              +L AC    S    + I S +  + F SN+ + ++LI+ Y KCG  + A  +F  + 
Sbjct: 266 MVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIE 325

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             DV+SWN+MI  YS      +A+ LFE M+   ++P + TFL +L AC+  G +  G+ 
Sbjct: 326 EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKW 385

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           V   + K        + ++ ++D+  + G +E A     ++  +  A  W  + +    H
Sbjct: 386 VHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS-WNAMLSGFAMH 444

Query: 604 SDLKMA-----EFISKQILELDPDDAAVYVTLSNMYAEAGL 639
              + A     E ++K +    PDD   +V + +   +AGL
Sbjct: 445 GHAERALALFSEMVNKGLFR--PDD-ITFVGVLSACTQAGL 482



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 172/395 (43%), Gaps = 40/395 (10%)

Query: 94  GFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           G++  G      V  Y ++    L +K  ++ VLS C      ELG+   + +       
Sbjct: 237 GYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGS 296

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           +  +T +L++MY KCG+      +   +   D+ S N ++ GY+  +L+++A + F  + 
Sbjct: 297 NLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVML 356

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKTAVSNALLTMYIKCGMM 269
             +V+PN  T+  +L  C  L A+D GK +HA   K L+  S  ++  +L+ MY KCG +
Sbjct: 357 RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCI 416

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI-DPNEYTFTVALAS 328
           E AE VF  +  RN+ SW A+++GF  HG  E+ L L   M   G+  P++ TF   L++
Sbjct: 417 EAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSA 476

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C       +G+ +   +I                               ++ G S     
Sbjct: 477 CTQAGLVDLGHQYFRSMI-------------------------------QDYGISPKLQH 505

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           +   I    R +K EEA      M   +   D   + S+L AC     +   E +  R+ 
Sbjct: 506 YGCMIDLLARAEKFEEAEILMKNM---EMEPDGAIWGSLLSACKAHGRVEFGEYVAERLF 562

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           + + E N      L   Y   G W+D  R+ ++L 
Sbjct: 563 QLEPE-NAGAFVLLSNIYAGAGRWDDVARIRTRLN 596


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 193/533 (36%), Positives = 303/533 (56%), Gaps = 14/533 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y ++L  C S  AI EG+++H   +K  YL    +   L+ +Y KC  + DA  +F+ + 
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           QRNV+SWTA+I+ + Q G   + L L   M     +PN +TF   L SC        G  
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H+  IKR      FVG++++DMY+  G I +A      + +    V+  A I+G+ +  
Sbjct: 185 IHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER-DVVACTAIISGYAQMG 243

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             EEA++ F Q+       +  TY+S+L A S L +L   +Q+HS +++S   S V + +
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IR 519
           SLI+ Y+KCG+   A R+F  +     +SWN+M+  YS++G AR+ + LF+ M  E  ++
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           P + T+LAVLS CSH  L   G ++F +MV  + GI P+  HY C+VDLLGRAG++E A 
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 423

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
            FI  +P  PTA IW  L  +CR HSD+++   + +++LEL+P++A  YV LSN+YA AG
Sbjct: 424 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              D    R LM+ K ++KEPG SW+E+   ++ F + + +H    +V  K+K+L  + +
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFK 543

Query: 699 DIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           + G+           D E++++VL  HSE+LA+ FGLI+ P        + L 
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLR 596



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 213/455 (46%), Gaps = 38/455 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C  +  +  G+R H  + KT      ++   L+ +Y KC  +     +  +MP  +
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRN 127

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++ Y++     +A + F+++   D +PNH+T++T+L  C      + G+Q+H+
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  Y S   V ++LL MY K G + DA  VF  L +R+V++ TAII+G+ Q G  E+
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L   ++ +G++ N  T+   L + + L   + G   H+ V++ G      +  +++D
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDE 421
           MYS  G +  A++    M +  + +SWNA + G+ ++    E +E F  M   N    D 
Sbjct: 308 MYSKCGNVCYARRIFDSMPER-TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            TY ++L  CS           H ++     E            YN     +  E     
Sbjct: 367 ITYLAVLSGCS-----------HGQLEDMGLEI----------FYNMVNGKDGIE----- 400

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
               D+  +  ++    + GR  +A    +KM      PT + + ++L +C     V+ G
Sbjct: 401 ---PDIGHYGCVVDLLGRAGRVEEAFDFIKKM---PFVPTAAIWGSLLGSCRVHSDVEIG 454

Query: 542 QKVFESMVKEYGILPEEA-HYSCMVDLLGRAGKLE 575
             V + +++   + PE A +Y  + +L   AGK E
Sbjct: 455 IIVGQKLLE---LEPENAGNYVILSNLYASAGKWE 486


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 191/536 (35%), Positives = 293/536 (54%), Gaps = 15/536 (2%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N + Y+  L  C        GK LH + +K          N LL MY+K   + DA  +F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCASLRNS 335
           + + +RN IS+  +I G+ +   + + + L V L RE  + PN++TF   L +CA++   
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE--VLPNQFTFASVLQACATMEGL 154

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           ++G   H  VIK G+    FV  A++D+Y+  G + E   +L       + V+WN  I G
Sbjct: 155 NLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM-ENSMELFAESPHRNDVTWNTVIVG 213

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             +    E+A+  F  M+       E TYSS L+AC+ L +L    QIHS  VK+ F+ +
Sbjct: 214 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKD 273

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + V ++LI+ Y KCGS +DA  VF  +   D VSWN+MI  YS +G  R+A+ +F+KM  
Sbjct: 274 IVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQE 333

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             ++P   TF+ VLSAC+++GL+  GQ  F SM++++GI P   HY+CMV LLGR G L+
Sbjct: 334 TEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLD 393

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A+  I  +P +P+  +WR L  AC  H+D+++    ++++LE++P D A +V LSNMYA
Sbjct: 394 KAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYA 453

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
            A    +    RK MK K + KEPG SWIE    ++ F   + SH E+  +   L+ L  
Sbjct: 454 TAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHM 513

Query: 696 QIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + +  G+            D EKE  +  HSERLA+ FG+I  P+ +     + L 
Sbjct: 514 KTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLR 569



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 2/309 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C +++    G+  H  I K   C D F    L+NMY K   +     +  +MP  + 
Sbjct: 45  LQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNT 104

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+ GYA++  F +A   F++L   +V PN +T++++L  C ++  ++ G Q+H  
Sbjct: 105 ISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGLNLGNQIHCH 163

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K+   S   VSNAL+ +Y KCG ME++  +F     RN ++W  +I G  Q GD EK 
Sbjct: 164 VIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKA 223

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           LRL   M E  +   E T++ AL +CASL     G   H+  +K        V  A++DM
Sbjct: 224 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDM 283

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G I +A+     M K    VSWNA I+G+  +    EA+  F +M   +   D+ T
Sbjct: 284 YAKCGSIKDARLVFDLMNKQ-DEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLT 342

Query: 424 YSSILKACS 432
           +  +L AC+
Sbjct: 343 FVGVLSACA 351



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 152/284 (53%), Gaps = 2/284 (0%)

Query: 114 LLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           +L  QF    VL  C+  E L LG + H  + K  +  D FV+ +L+++YAKCG +++ +
Sbjct: 134 VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSM 193

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +  + P+ +  + N ++ G+ +    ++A   FL +    VQ    TYS+ L  C SL+
Sbjct: 194 ELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLA 253

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A++ G Q+H+ T+K  +     V+NAL+ MY KCG ++DA  VF+ + +++ +SW A+I+
Sbjct: 254 ALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMIS 313

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMA 351
           G+  HG   + LR+   M+E  + P++ TF   L++CA+      G  +   +I+  G+ 
Sbjct: 314 GYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIE 373

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                 T +V +    G + +A K + E+    S + W A +  
Sbjct: 374 PCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 417


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 215/712 (30%), Positives = 368/712 (51%), Gaps = 42/712 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A QLF++ P R   S+ +++ +GY+       SRN +  R + F   F  +  S T+ + 
Sbjct: 65  ARQLFDEMPYR-NTSSVNMMVSGYVK------SRNLFRAR-ELFESMFSRNEVSWTIMIG 116

Query: 108 CYSLESLLDKQFVI-----------------EVLSYCSREECLELGRRYHALITKTAVCG 150
            YS  +   + F +                  +LS       L+   + H+ I +     
Sbjct: 117 GYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSA 176

Query: 151 DQFVTASLVNMYAK--CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
              V  SLV+ Y K  C DI S +    +MP  D  S N ++ GY K    ++A   F++
Sbjct: 177 SLIVFNSLVDSYCKTCCLDIASQL--FSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQ 234

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +  +D QP+ +T++ ML +      +  G+Q+H   +K  Y+    V+NALL  Y K   
Sbjct: 235 MRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDY 294

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ++ A+++F+ + + + +S+  II G+  +G YEK   L   ++    D   + F   L+ 
Sbjct: 295 IDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV 354

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A   N  MG   HAQ +         VG A+VDMY+   +  +A +    +    +SV 
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYR-NSVP 413

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W A I+ + +    EEA++ F +M R +   D+ T++S LKA + L S++  +Q+HS ++
Sbjct: 414 WTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVI 473

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +    S+V  GS L++ Y  CGS +DA  VF ++   ++V WN++I AYSQNG A     
Sbjct: 474 RLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFS 533

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            F  M+  G+ P + +FL+VL+ACSH GLV+     F SM + Y + P   HY+ M+D+L
Sbjct: 534 SFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVL 593

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAAVY 627
            R+G+   A   IS +P +P   +W  +  +CR H +  +A+  + Q+ ++D   DAA Y
Sbjct: 594 CRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAY 653

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           V +SN+YAEAG   +A + +K M+ + + K    SW+E+ ++++ F + +++H +  ++ 
Sbjct: 654 VNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIR 713

Query: 688 EKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGLISLP 728
            K+  L++ ++  G+           D E K + + YHSERLA+ F LI+ P
Sbjct: 714 RKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINTP 765


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 188/614 (30%), Positives = 327/614 (53%), Gaps = 13/614 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  GR  H  + +     D  V  +L+ MY KCGD+ +   V  +MP  D
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRD 272

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N +  +    F  +    V P+  T ++++  C  L     G+Q+H 
Sbjct: 273 RISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ ++    ++ N+L+ MY   G++E+AE+VF     R+++SWTA+I+G++     +K
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L    +M  +GI P+E T  + L++C+ L N  MG   H    ++G+     V  +++D
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +   ++       + VSW + I G   N +  EA+  F +M+R     +  
Sbjct: 453 MYAKCKCI-DKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLKP-NSV 510

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T   +L AC+ + +L   ++IH+  +++    +  + +++++ Y +CG  E A + F  +
Sbjct: 511 TLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV 570

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V SWN ++  Y++ G+   A  LF++MV   + P   TF+++L ACS SG+V +G 
Sbjct: 571 DH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGL 629

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F SM  +Y I+P   HY+C+VDLLGR+GKLE A  FI  +P+KP   +W  L  +CR 
Sbjct: 630 EYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRI 689

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  +++ E  ++ I + D      Y+ LSN+YA+ G      E RK+M+   +  +PGCS
Sbjct: 690 HHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCS 749

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-------HTD---NEKEDRVL 712
           W+EV   ++ F S +  H ++ ++   L++  +++++ G       H D     K D   
Sbjct: 750 WVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHMDIMEASKADIFC 809

Query: 713 YHSERLAVGFGLIS 726
            HSERLA+ FGLI+
Sbjct: 810 GHSERLAIVFGLIN 823



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 233/461 (50%), Gaps = 11/461 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + ++  C  +   + G R ++ ++ +       +  +L++M+ + G++     V  +M  
Sbjct: 110 VALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEK 169

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            ++ S N L+ GYAK  LFD+A   + ++  + V+P+ YT+  +L  CG +  +  G+++
Sbjct: 170 RNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREI 229

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   ++  + S   V NAL+TMY+KCG +  A  VF+ +  R+ ISW A+I+G+ ++G  
Sbjct: 230 HVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVC 289

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LRL  +M +  +DP+  T T  + +C  L +  +G   H  V++        +  ++
Sbjct: 290 LEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSL 349

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MYS +G I EA+       +    VSW A I+G+      ++A+E +  M       D
Sbjct: 350 IPMYSSVGLIEEAETVFSRT-ECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPD 408

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           E T + +L ACS L +L     +H    +    S   V +SLI+ Y KC   + A  +F 
Sbjct: 409 EITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFH 468

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                ++VSW S+I     N R  +A+  F +M +  ++P + T + VLSAC+  G +  
Sbjct: 469 STLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTC 527

Query: 541 GQKV----FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           G+++      + V   G +P     + ++D+  R G++E A
Sbjct: 528 GKEIHAHALRTGVSFDGFMP-----NAILDMYVRCGRMEYA 563



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 129/539 (23%), Positives = 234/539 (43%), Gaps = 66/539 (12%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
            LGR+ H  + +T    D  +  SL+ MY+  G I+    V  +    D+ S   +++GY
Sbjct: 325 RLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGY 384

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
               +  +A   +  ++   + P+  T + +L+ C  L  +D G  LH    +   +S +
Sbjct: 385 ENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYS 444

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD-YEKPLRLVCLMRE 312
            V+N+L+ MY KC  ++ A  +F   +++N++SWT+II G + +   +E       ++R 
Sbjct: 445 IVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR 504

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             + PN  T    L++CA +     G   HA  ++ G++   F+  AI+DMY   G +  
Sbjct: 505 --LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEY 562

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A KQ   +    +  SWN  + G+    K   A E F +MV ++ + +E T+ SIL ACS
Sbjct: 563 AWKQFFSVDHEVT--SWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACS 620

Query: 433 LLPSLAT-CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSW 490
               +A   E  +S   K     N+   + +++   + G  E+A     ++    D   W
Sbjct: 621 RSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVW 680

Query: 491 NSMIKA----------------------------------YSQNGRARKAIILFEKMVVE 516
            +++ +                                  Y+ NG+  K   + + M   
Sbjct: 681 GALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQN 740

Query: 517 G--IRP------TNSTFLAVLSACSHSGLVQDGQKVFESM---VKEYGIL-PEEAHYSCM 564
           G  + P         T  A LS+ +    +++   + E     +KE G+  PE +H   M
Sbjct: 741 GLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESSHMDIM 800

Query: 565 ----VDLL-GRAGKLEIALIFISNLPIKPTAPIW--RPLFAACRCHSDLKMAEFISKQI 616
                D+  G + +L I    I++    P  PIW  + L+    CH+ +K   FIS+++
Sbjct: 801 EASKADIFCGHSERLAIVFGLINS---GPGMPIWVTKNLYMCQSCHNIVK---FISREV 853



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/256 (17%), Positives = 107/256 (41%), Gaps = 36/256 (14%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y ++++ C    +     +++S +  S    ++ +G++L+  + + G+  DA  VF ++ 
Sbjct: 109 YVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRME 168

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++ SWN ++  Y++ G   +A+ L+ +M+  G++P   TF  VL  C     +  G++
Sbjct: 169 KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGRE 228

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL------------------- 584
           +   +++ YG   +    + ++ +  + G +  A +    +                   
Sbjct: 229 IHVHVIR-YGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENG 287

Query: 585 ---------------PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYV 628
                          P+ P       +  AC    D ++   I   +L  +   D +++ 
Sbjct: 288 VCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHN 347

Query: 629 TLSNMYAEAGLQADAE 644
           +L  MY+  GL  +AE
Sbjct: 348 SLIPMYSSVGLIEEAE 363


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 187/525 (35%), Positives = 299/525 (56%), Gaps = 17/525 (3%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           CG L    +GK++H   +KL +     V+ +L+ MY + G++ DA  +F+ +  R+  SW
Sbjct: 7   CGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSW 63

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A+I+G+ Q+G+  + L +   MR +G+  +  T    L  CA + +   G + H  VIK
Sbjct: 64  NAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIK 123

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+    FV  A+++MY+  G +  A+K    + K    VSWN  I G+ +N    EAIE
Sbjct: 124 HGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDV--VSWNTLITGYAQNGLASEAIE 181

Query: 408 AFSQMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            +  M  ++    ++ T+ SIL A S + +L    +IH +++K+   S+V VG+ LI+ Y
Sbjct: 182 VYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMY 241

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG  +DA  +F Q+   + V WN+MI  Y  +G   KA+ LF +M  E ++P + TF+
Sbjct: 242 GKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFV 301

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           ++LSACSHSGLV D Q  F  M +EYGI P   HY CMVDL GRAG+LE+A  FI  +PI
Sbjct: 302 SLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPI 361

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           +P A  W  L  ACR H ++++ +  S+++ E+D ++   YV LSN+YA  G     ++ 
Sbjct: 362 QPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDV 421

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--- 703
           R L + + + K PG S I + NK+  F++ N++H +  ++Y +L+ L  +I+ IG+    
Sbjct: 422 RSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDF 481

Query: 704 --------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                   ++EKE  ++ HSERLA+ +G+IS   K      + L 
Sbjct: 482 CFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLR 526



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 210/452 (46%), Gaps = 60/452 (13%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H L+ K     D FV ASLV+MY++ G +     +   MP  D  S N +++GY +
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 196 NALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           N    +A      ++L+G  V+ +  T +++L +C  +  I  GK +H   +K     + 
Sbjct: 73  NGNAAEALDIADEMRLEG--VKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE- 312
            VSNAL+ MY K G +  A+ VF GL+ ++V+SW  +I G+ Q+G   + + +  LM E 
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           + I PN+ T+   L + + +     G   H QVIK  +    FVGT ++DMY   G++ +
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDD 249

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A     ++ +  +SV WNA I+ +  +   E+A+E F +M       D  T+ S+L ACS
Sbjct: 250 AISLFYQVPRK-NSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACS 308

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-----TAADV 487
                      HS +V                         DA+  F+ +         +
Sbjct: 309 -----------HSGLVS------------------------DAQWCFNMMEEEYGIKPSL 333

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG----QK 543
             +  M+  + + G    A    +KM    I+P  S + A+L+AC   G ++ G    ++
Sbjct: 334 KHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRIHGNIELGKHASER 390

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +FE   +  G      +Y  + ++    GK E
Sbjct: 391 LFEVDSENVG------YYVLLSNIYANVGKWE 416



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 216/512 (42%), Gaps = 71/512 (13%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  VL  C++   +  G+  H  + K  +  + FV+ +L+NMYAK G +     V
Sbjct: 93  MDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKV 152

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSA 233
              +   D+ S N L+ GYA+N L  +A   +L ++   ++ PN  T+ ++L     + A
Sbjct: 153 FGLL-IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGA 211

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           + +G ++H Q +K    S   V   L+ MY KCG ++DA S+F  + ++N + W A+I+ 
Sbjct: 212 LQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISC 271

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  HGD EK L L   M+ + + P+  TF   L++C     SH G +  AQ         
Sbjct: 272 YGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC-----SHSGLVSDAQ--------- 317

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM- 412
                            W      +E G   S   +   +  F R  + E A     +M 
Sbjct: 318 -----------------WCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP 360

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           ++ DA+     + ++L AC +  ++   +    R+ +   E NV     L   Y   G W
Sbjct: 361 IQPDAS----AWGALLNACRIHGNIELGKHASERLFEVDSE-NVGYYVLLSNIYANVGKW 415

Query: 473 EDAERVFSQLTAADV---VSWNSMIKA------YSQNGRARKAIILFEKMVVEGIRPTNS 523
           E  + V S      +     W+S+I        Y+ N    K   ++ ++     R   S
Sbjct: 416 EGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYREL-----RDLTS 470

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
               +       G V D   V + + ++     E+ H      L+G + +L IA   IS 
Sbjct: 471 KIKTI-------GYVPDFCFVLQDVEED-----EKEHI-----LMGHSERLAIAYGIIST 513

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
            P  P   I++ L     CH+  K    I+++
Sbjct: 514 SPKTPIR-IFKNLRVCGDCHTVTKFISIITER 544


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 208/705 (29%), Positives = 355/705 (50%), Gaps = 34/705 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF+K P++  +S + LI         +G S NG+           ++ G    +P  
Sbjct: 264 AVELFDKMPEQNLISWNSLI---------RGFSENGFWLEAYRAFRSLLESG-DGLIP-- 311

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   ++ +L  CS E  +++G   H +  K  +  +  V  +L++MY+KCG 
Sbjct: 312 --------DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTML 225
           +     + +++    + S N ++  Y++     + F    K+  +   ++ N  T   +L
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLL 423

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C   S +   + LH  +++  +  K  ++NA +  Y KCG +  AE VF G+  ++V 
Sbjct: 424 PACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS 483

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G  Q+GD  K L     M   GI P++++    L +C  L     G   H  V
Sbjct: 484 SWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           ++ G+ +  FV  +++ +Y    + +  +   + MG   +SV WNA ++G+ +N+   EA
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDK-NSVCWNAMLSGYSQNELPNEA 602

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  F QM+ +    DE   +SIL ACS L +L   +++H   +K+    +  V  SL++ 
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G    ++R+F++L   +V SWN MI  +  +G+  KA+ LFE M     +P   TF
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           L VL AC H+GLV +G      M   Y + PE  HY+C++D+LGRAG+L  AL FI+ +P
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMP 782

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +P A IW  L ++   + DL+M E  ++++L L+ + A  Y+ LSN+YA AG       
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRM 842

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            R+ MK   + K+ GCSWIE+  K+Y F +   S+    ++ +   +L +QI +IG+T +
Sbjct: 843 VRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902

Query: 706 -----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                      EK   +  HSE++A+ FG ++         S+ L
Sbjct: 903 CSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNL 947



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 222/428 (51%), Gaps = 7/428 (1%)

Query: 123 VLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C + + +E+GR+   ++   +   GD  +   L+ MY+ CG       V  ++   
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++   N L++GY +N L+D+A   FL+L  + + QP+++T+  ++  C     I  GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K+  +    V NA++ +Y KCG +++A  +F+ + ++N+ISW ++I GF ++G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 301 EKPLRLVCLMRE--DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            +  R    + E  DG+ P+  T    L  C+   N  +G + H   +K G+     V  
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-- 416
           A++DMYS  G + EA    +++ ++ S VSWN+ I  + R     E  +   +M   +  
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +E T  ++L AC     L +   +H   ++  F+    + ++ I AY KCGS   AE
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF  +    V SWN++I  ++QNG   KA+  + +M   GI P + + +++L AC   G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531

Query: 537 LVQDGQKV 544
           L+Q G+++
Sbjct: 532 LLQYGKEI 539



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V S+F  +  + + LI  Y+ CG   ++  VF +L   ++  WN+++  Y +N    +AI
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194

Query: 508 ILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
             F +++ V   +P N TF  ++ AC+    +  G+ V   M  + G++ +    + M+ 
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV-HGMAVKMGLIMDLFVGNAMIA 253

Query: 567 LLGRAGKLEIALIFISNLP 585
           L G+ G L+ A+     +P
Sbjct: 254 LYGKCGFLDEAVELFDKMP 272


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 197/605 (32%), Positives = 330/605 (54%), Gaps = 20/605 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR  H          +  + +++V MY K   ++    V  +MP  D    N +++GY K
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE---GKQLHAQTMKLQYLSK 252
           N ++ ++   F  L  I+        +T+L I  +++ + E   G Q+H+   K    S 
Sbjct: 198 NEMYVESIQVFRDL--INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V    +++Y KCG ++   ++F    + +++++ A+I+G+  +G+ E  L L   +  
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G      T    +     L    + Y  H   +K        V TA+  +YS L EI  
Sbjct: 316 SGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+K   E     S  SWNA I+G+ +N  TE+AI  F +M +++ + +  T + IL AC+
Sbjct: 373 ARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +L+  + +H  +  + FES+++V ++LI  Y KCGS  +A R+F  +T  + V+WN+
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y  +G+ ++A+ +F +M+  GI PT  TFL VL ACSH+GLV++G ++F SM+  Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G  P   HY+CMVD+LGRAG L+ AL FI  + I+P + +W  L  ACR H D  +A  +
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           S+++ ELDPD+   +V LSN+++       A   R+  K ++++K PG + IE+    + 
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVL---YHSERLAVG 721
           F S ++SH ++ ++YEKL++L  ++ + G+         D E+E+R L    HSERLA+ 
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731

Query: 722 FGLIS 726
           FGLI+
Sbjct: 732 FGLIA 736



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 197/420 (46%), Gaps = 41/420 (9%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++++L   +  + L LG + H+L TKT      +V    +++Y+KCG IK   A+
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++    DI + N ++ GY  N   + + S F  L L G  ++ +  T  +++ + G L 
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS--TLVSLVPVSGHLM 336

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            I     +H   +K  +LS  +VS AL T+Y K   +E A  +F+   ++++ SW A+I+
Sbjct: 337 LI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ Q+G  E  + L   M++    PN  T T  L++CA L    +G   H  V       
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +V TA++ MY+  G I EA++    M K  + V+WN  I+G+  + + +EA+  F +M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQGQEALNIFYEM 512

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           + +       T+  +L ACS           H+ +VK   E    + +S+I  Y      
Sbjct: 513 LNSGITPTPVTFLCVLYACS-----------HAGLVKEGDE----IFNSMIHRYG----- 552

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
                         V  +  M+    + G  ++A+   E M +E   P +S +  +L AC
Sbjct: 553 ----------FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE---PGSSVWETLLGAC 599



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 228/520 (43%), Gaps = 47/520 (9%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           D+   N L+ G++ N     + S F  L    D++PN  TY+  ++          G+ +
Sbjct: 82  DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H Q +     S+  + + ++ MY K   +EDA  VF+ + +++ I W  +I+G++++  Y
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201

Query: 301 EKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            + +++   L+ E     +  T    L + A L+   +G   H+   K G    D+V T 
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
            + +YS  G+I       +E  K    V++NA I G+  N +TE ++  F +++ + A  
Sbjct: 262 FISLYSKCGKIKMGSALFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
              T  S++        L     IH   +KS F S+  V ++L   Y+K    E A ++F
Sbjct: 321 RSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            +     + SWN+MI  Y+QNG    AI LF +M      P   T   +LSAC+  G + 
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437

Query: 540 DGQKV--------FES----------MVKEYGILPE------------EAHYSCMVDLLG 569
            G+ V        FES          M  + G + E            E  ++ M+   G
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497

Query: 570 RAGKLEIAL-IF--ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
             G+ + AL IF  + N  I PT   +  +  AC     +K  + I   ++     + +V
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557

Query: 627 --YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS-W 663
             Y  + ++   AG       QR L  ++ +S EPG S W
Sbjct: 558 KHYACMVDILGRAG-----HLQRALQFIEAMSIEPGSSVW 592



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 127/288 (44%), Gaps = 28/288 (9%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA +LF++SP+++ L + + + +GY    + G++ +  S   +     F      N V +
Sbjct: 372 SARKLFDESPEKS-LPSWNAMISGYT---QNGLTEDAISLFREMQKSEF----SPNPVTI 423

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           TC              +LS C++   L LG+  H L+  T      +V+ +L+ MYAKCG
Sbjct: 424 TC--------------ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            I     +   M   +  + N +++GY  +    +A + F ++    + P   T+  +L 
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRN 283
            C     + EG ++   +M  +Y  + +V +   ++ +  + G ++ A    E + ++  
Sbjct: 530 ACSHAGLVKEGDEIF-NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
              W  ++   + H D      +   + E  +DP+   + V L++  S
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLSNIHS 634


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 197/625 (31%), Positives = 327/625 (52%), Gaps = 13/625 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  ++S C+  +    G   H+L  ++++     V  +LVNMY+  G +     + 
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S N +++ Y +N     A     +L   +  PNH T+S+ L  C S  A+ 
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK +HA  ++L       V N+L+TMY KC  MEDAE VF+ +   +V+S+  +I G+ 
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMALGD 354
              D  K +++   +R  GI PN  T      S  S  + H  G   HA +I+ G    +
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDE 484

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V  +++ MY+  G + E+   +     + + VSWNA IA   +    EEA++ F  M  
Sbjct: 485 YVANSLITMYAKCGNL-ESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQH 543

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D    +  L +C+ L SL    Q+H   +KS  +S+ +V ++ ++ Y KCG   +
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNE 603

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
             ++           WN++I  Y++ G  ++A   F++MV  G +P   TF+A+LSACSH
Sbjct: 604 MLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSH 663

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV  G   + SM   +G+ P   H  C+VDLLGR G+   A  FI  +P+ P   IWR
Sbjct: 664 AGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWR 723

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L ++ R H +L++    +K++LELDP D + YV LSN+YA      D ++ R  MK   
Sbjct: 724 SLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIN 783

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TD 704
           I+K P CSW+++ N++  F   ++ H    K+Y KL +++ ++ ++G+          TD
Sbjct: 784 INKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTD 843

Query: 705 NEKEDRVLY-HSERLAVGFGLISLP 728
            E++++ L+ HSE+LA+ +GLI +P
Sbjct: 844 EEQKEQNLWNHSEKLALAYGLIVVP 868



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/496 (24%), Positives = 243/496 (48%), Gaps = 8/496 (1%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP++ ++L SL      +       R+E +  G   HAL  +  + G+ ++  +L+++Y 
Sbjct: 37  VPLSGFALASL------VTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYG 90

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
             G +     +  +MP  ++ S   L+   + N   ++    + ++    V  N   ++T
Sbjct: 91  SRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFAT 150

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ++++CGSL     G Q+ +  +     ++ +V+N+L+TM+   G ++DAE +F+ + + +
Sbjct: 151 VVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHD 210

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            IS  A+I+ +   G   K   +   MR  G+ P+  T    ++ CAS  +   G   H+
Sbjct: 211 TISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHS 270

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             ++  +     V  A+V+MYS  G++ +A+     M +    +SWN  I+ + +N  + 
Sbjct: 271 LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR-DLISWNTMISSYVQNCNST 329

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           +A++   Q+   +   +  T+SS L ACS   +L   + +H+ +++   + N+ VG+SLI
Sbjct: 330 DALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLI 389

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y KC S EDAE+VF  +   DVVS+N +I  Y+      KA+ +F  +   GI+P   
Sbjct: 390 TMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYI 449

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           T + +  + + S  + +  +   + +   G L +E   + ++ +  + G LE +    ++
Sbjct: 450 TMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509

Query: 584 LPIKPTAPIWRPLFAA 599
           +  K     W  + AA
Sbjct: 510 ITNKNIVS-WNAIIAA 524


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 208/705 (29%), Positives = 355/705 (50%), Gaps = 34/705 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF+K P++  +S + LI         +G S NG+           ++ G    +P  
Sbjct: 264 AVELFDKMPEQNLISWNSLI---------RGFSENGFWLEAYRAFRSLLESG-DGLIP-- 311

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   ++ +L  CS E  +++G   H +  K  +  +  V  +L++MY+KCG 
Sbjct: 312 --------DVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTML 225
           +     + +++    + S N ++  Y++     + F    K+  +   ++ N  T   +L
Sbjct: 364 LSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLL 423

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C   S +   + LH  +++  +  K  ++NA +  Y KCG +  AE VF G+  ++V 
Sbjct: 424 PACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVS 483

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW A+I G  Q+GD  K L     M   GI P++++    L +C  L     G   H  V
Sbjct: 484 SWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFV 543

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           ++ G+ +  FV  +++ +Y    + +  +   + MG   +SV WNA ++G+ +N+   EA
Sbjct: 544 LRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDK-NSVCWNAMLSGYSQNELPNEA 602

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  F QM+ +    DE   +SIL ACS L +L   +++H   +K+    +  V  SL++ 
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y K G    ++R+F++L   +V SWN MI  +  +G+  KA+ LFE M     +P   TF
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           L VL AC H+GLV +G      M   Y + PE  HY+C++D+LGRAG+L  AL FI+ +P
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMP 782

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +P A IW  L ++   + DL+M E  ++++L L+ + A  Y+ LSN+YA AG       
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRM 842

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
            R+ MK   + K+ GCSWIE+  K+Y F +   S+    ++ +   +L +QI +IG+T +
Sbjct: 843 VRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902

Query: 706 -----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                      EK   +  HSE++A+ FG ++         S+ L
Sbjct: 903 CSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNL 947



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 222/428 (51%), Gaps = 7/428 (1%)

Query: 123 VLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C + + +E+GR+   ++   +   GD  +   L+ MY+ CG       V  ++   
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           ++   N L++GY +N L+D+A   FL+L  + + QP+++T+  ++  C     I  GK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K+  +    V NA++ +Y KCG +++A  +F+ + ++N+ISW ++I GF ++G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 301 EKPLRLVCLMRE--DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            +  R    + E  DG+ P+  T    L  C+   N  +G + H   +K G+     V  
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-- 416
           A++DMYS  G + EA    +++ ++ S VSWN+ I  + R     E  +   +M   +  
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +E T  ++L AC     L +   +H   ++  F+    + ++ I AY KCGS   AE
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF  +    V SWN++I  ++QNG   KA+  + +M   GI P + + +++L AC   G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531

Query: 537 LVQDGQKV 544
           L+Q G+++
Sbjct: 532 LLQYGKEI 539



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V S+F  +  + + LI  Y+ CG   ++  VF +L   ++  WN+++  Y +N    +AI
Sbjct: 135 VSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAI 194

Query: 508 ILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
             F +++ V   +P N TF  ++ AC+    +  G+ V   M  + G++ +    + M+ 
Sbjct: 195 HTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV-HGMAVKMGLIMDLFVGNAMIA 253

Query: 567 LLGRAGKLEIALIFISNLP 585
           L G+ G L+ A+     +P
Sbjct: 254 LYGKCGFLDEAVELFDKMP 272


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 206/649 (31%), Positives = 344/649 (53%), Gaps = 33/649 (5%)

Query: 110 SLESLLDKQFVIEV----LSY------CSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           SLE+ L      EV     +Y      CSR   L+ G+  HAL     +    FV+ SLV
Sbjct: 97  SLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLV 156

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           +MYA+CGD+     V       D  S N L++GY +    ++    F  +    +  N +
Sbjct: 157 SMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSF 216

Query: 220 TYSTMLAIC----GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
              +++  C    GS+  I E   +H   +K    +   +++A++ MY K G + +A ++
Sbjct: 217 ALGSVIKCCSGGDGSVRGIAEA--VHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVAL 274

Query: 276 FEGLVQRNVISWTAIINGFKQ-----HGDY-EKPLRLVCLMREDGIDPNEYTFTVALASC 329
           F+ ++  NV+ + A+I G  +     H +   + L L   ++  G++P E+TF+  + +C
Sbjct: 275 FKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRAC 334

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
               +   G   H QV+K      DF+G+A++D+Y     + +  +  + + K    V+W
Sbjct: 335 NLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQ-DVVTW 393

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
            A I+G  +N+  E A+  F +++      D FT SS++ AC+ L  + T EQ+     K
Sbjct: 394 TAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATK 453

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S F+    +G+S I  Y + G+ E A + F ++ + DVVSW+++I +++Q+G AR+A+  
Sbjct: 454 SGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQF 513

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +MV   + P   TFL VL+ACSH GLV +G + +E M  EYG+ P   H +C+VDLLG
Sbjct: 514 FNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLG 573

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+L  A  FI +        +W+ L  +CR H D++  + ++ +I+EL P  +  YV 
Sbjct: 574 RAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVN 633

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           L NMY +AG  +   + R LMK + + KEPG SWIE+ + I+ F + +KSH E   +Y K
Sbjct: 634 LYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTK 693

Query: 690 LKQLMQQIEDIGHTD----------NEKEDRVLYHSERLAVGFGLISLP 728
           L +++ +I+ +  TD            +++ +  HSE+LAV  G+I LP
Sbjct: 694 LAEMLSKIDKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLP 742



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 227/450 (50%), Gaps = 13/450 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAK--CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           H  I +       F+  +L+  Y +   GD      ++ +MP  +  S N L+  Y++  
Sbjct: 33  HGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAG 92

Query: 198 LFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             +++   FL      +V+ + +TY+  LA C     + EGK +HA  +         VS
Sbjct: 93  QTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVS 152

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N+L++MY +CG M +A  VF+   +R+ +SW ++++G+ + G +E+ LR+  LMR   + 
Sbjct: 153 NSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMG 212

Query: 317 PNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
            N +     +  C+    S  G     H  V+K G+    F+ +A+VDMY+  G + EA 
Sbjct: 213 LNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAV 272

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQK------TEEAIEAFSQMVRNDAACDEFTYSSIL 428
              K +    + V +NA IAG  R++         EA+  +S++        EFT+SS++
Sbjct: 273 ALFKSV-LDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVI 331

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           +AC+L   +   +QIH +++K  F+ +  +GS+LI+ Y      ED  R F  +   DVV
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVV 391

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +W +MI    QN    +A+ LF +++  G++P   T  +V++AC+   +V+ G+++ +  
Sbjct: 392 TWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQM-QCF 450

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
             + G     A  +  + +  R+G +E A+
Sbjct: 451 ATKSGFDRFTAMGNSCIHMYARSGNVEAAI 480


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 188/581 (32%), Positives = 319/581 (54%), Gaps = 1/581 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS    E  +E GR+ H L+ ++ +     V  +LV +Y+K   +     +   MP +D
Sbjct: 117 VLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQID 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N ++ GY +N   D A   F ++    ++P+  T+++ L      S++ + K++H 
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++   +    +++AL+ +Y KC     A  +F    + +++ +TA+I+G+  +G  + 
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   + +  + PN  TF+  L +CA L    +G   H  +IK  +     VG+AI++
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMN 356

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A      +     ++ WN+ I  F ++ K EEAI  F QM       D  
Sbjct: 357 MYAKCGRLDLAHLIFGRI-SIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCV 415

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T S+ L AC+ +P+L   ++IH  ++K  FES++   S+LI  Y KCG    A  VF+ +
Sbjct: 416 TVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLM 475

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + V+WNS+I AY  +G    ++ LF  M+ EGI+P + TFL +LS+C H+G V+DG 
Sbjct: 476 QEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGV 535

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F  M +EYGI  +  HY+CM DL GRAG L+ A   I+++P  P A +W  L  ACR 
Sbjct: 536 RYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRV 595

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  S+ +L+L+P ++  Y+ L+++ A+AG      + + LMK + + K PGCS
Sbjct: 596 HGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCS 655

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
           WIEV N    FF+ + SH E P++Y  LK L+ ++  +G+ 
Sbjct: 656 WIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGYV 696



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 256/521 (49%), Gaps = 9/521 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     V+  C+    + LG+    +I +     D FV +SL+ +YA  G I+      
Sbjct: 9   DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   D    N ++ GY +    D A   F  +   + +P+  T++ +L+I  S + ++
Sbjct: 69  DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLH   ++        V N L+T+Y K   + DA  +F+ + Q +++ W  +I G+ 
Sbjct: 129 YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYV 188

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  +    L   M   GI P+  TFT  L S A   +       H  +++ G+ L  +
Sbjct: 189 QNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVY 248

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A++D+Y    +   A K    +      V + A I+G+  N   ++A+E F  +++ 
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFN-LSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK 307

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T+SSIL AC+ L ++    ++H  I+K++ E    VGS+++  Y KCG  + A
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLA 367

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F +++  D + WNS+I ++SQ+G+  +AI LF +M +EG++    T  A LSAC++ 
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427

Query: 536 GLVQDGQKVFESMVKEYGILPEEAH-YSCMVDLLGRAGKLEIA-LIFISNLPIKPTAPIW 593
             +  G+++   M+K  G    +    S ++++  + GKL IA L+F  NL  +     W
Sbjct: 428 PALHYGKEIHGFMIK--GAFESDLFDMSALINMYAKCGKLNIARLVF--NLMQEKNEVAW 483

Query: 594 RPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSN 632
             + AA   H  L  +  +   +LE  + PD       LS+
Sbjct: 484 NSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 191/378 (50%), Gaps = 4/378 (1%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G  V P+ YT+  ++  C  L+ +  GK +    +++ +     V+++L+ +Y   G +E
Sbjct: 3   GCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIE 62

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA   F+ ++ ++ + W  +ING+ Q G+ +  ++L   M      P+  TF   L+   
Sbjct: 63  DARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISC 122

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           S      G   H  V++ G+     VG  +V +YS   ++ +A+K L +M      V WN
Sbjct: 123 SEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARK-LFDMMPQIDLVVWN 181

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I G+ +N   ++A   F++M+      D  T++S L + +   SL   ++IH  IV+ 
Sbjct: 182 RMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH 241

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               +V++ S+LI+ Y KC     A ++F+  T  D+V + +MI  Y  NG  + A+ +F
Sbjct: 242 GVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIF 301

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLG 569
             ++ + + P   TF ++L AC+    ++ G+++   ++K    L E+    S ++++  
Sbjct: 302 RWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNE--LEEKCPVGSAIMNMYA 359

Query: 570 RAGKLEIALIFISNLPIK 587
           + G+L++A +    + IK
Sbjct: 360 KCGRLDLAHLIFGRISIK 377


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 187/532 (35%), Positives = 297/532 (55%), Gaps = 5/532 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  HA I  + +  D FV ++L+NMYA+CGD+ S     +++    +     L+  Y +
Sbjct: 263 GKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQ 321

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
              + +A   + ++D   V  +  TY T L  C SL A+ EGK +H++  +  + S   V
Sbjct: 322 TCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS-LVV 380

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
             ALLTMY KCG ++ A +VF  + Q RNV  WTA+I+ + Q G  ++ L L   M  +G
Sbjct: 381 HTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEG 440

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
             PNEYTF+  LA+C+S  +   G   H  V    +A    V  A+V MY+  G +  AK
Sbjct: 441 TRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAK 500

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              +  G+    VSWNA I  + ++    EA++ +  M       DE T +S L AC++ 
Sbjct: 501 SAFEASGRK-DLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAIS 559

Query: 435 PSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
            SL    +IHSR++K++ F S++ V ++L+  Y +CG  E A  +F  +   DV+SW +M
Sbjct: 560 GSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAM 619

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
             AY+Q G A + + L+ +MV+ GIRP   TF ++L  CSH+GL+  G + F  M  E+ 
Sbjct: 620 TSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHE 679

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           ++P   H+ CMVDLLGR+G+L  A   + ++P +P +  W  +  +C+ HSD   A+  +
Sbjct: 680 VVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAA 739

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
           +++ ELDP++ ++Y  LS+++  AGL  +A E +  MK   + K PG S IE
Sbjct: 740 RRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 279/538 (51%), Gaps = 18/538 (3%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E+L  C R   L  G+  H  + +T    +QF+   L+ MY  CG+I    A  +    +
Sbjct: 47  ELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASI 106

Query: 182 DIASC-NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
              +C N +L+ Y KN L+++A   + ++     +P+  TY  +L  C ++ ++ E +++
Sbjct: 107 KAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREI 166

Query: 241 HAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           HA  ++   + +  +S  NAL+ MY KCG +E+A  VF+G+  R+ +SWT++I+ +  +G
Sbjct: 167 HASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNG 226

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ L L   M  DGI P+  TFT AL +C  L +   G   HA+++   M   DFVG+
Sbjct: 227 FCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNME-SDFVGS 282

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+++MY+  G++  A++  +++ ++   V W + +  + +     EA++ + +M      
Sbjct: 283 ALINMYARCGDVSSARQAFEKI-QNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVH 341

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  TY + L AC+ L +L   + IHSR+ +  F+S V V ++L+  Y KCG  + A  V
Sbjct: 342 ADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAV 400

Query: 479 FSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           F+++    +V  W +MI AY+Q G  ++A+ L+++MV EG RP   TF  VL+ACS SG 
Sbjct: 401 FNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGD 460

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           ++ G K+    V+   +    A  + +V +  + G LE+A         K     W  + 
Sbjct: 461 LEAGMKI-HGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVS-WNAMI 518

Query: 598 AACRCHS----DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            A   H      L + + ++ Q   + PD+  +  +LS       LQ   E   +++K
Sbjct: 519 GAYAQHGLGREALDLYQTMTSQ--GVLPDEVTIASSLSACAISGSLQLGREIHSRVLK 574



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 221/469 (47%), Gaps = 44/469 (9%)

Query: 209 LDGIDVQPNHYT--YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           L+ +D + + Y   Y  +L  CG L ++ EGK +H   ++  +     + N L+ MY  C
Sbjct: 31  LEQLDQRRHGYVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNC 90

Query: 267 GMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           G +  A + F+     + V  +  +++ + ++G + + L L   M E+G +P++ T+ + 
Sbjct: 91  GEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIV 150

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVG--TAIVDMYSGLGEIWEAKKQLKEMGKS 383
           L SC+++ +       HA +I+    + D +    A+V+MY   G + EA+K    + K+
Sbjct: 151 LGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGI-KN 209

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
             +VSW + I+ +  N   +EA++ + QM  +    D  T++S L AC+    L   + I
Sbjct: 210 RDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACT---KLVDGKAI 266

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H+RIV S  ES+  VGS+LI  Y +CG    A + F ++    VV W S++ AY Q    
Sbjct: 267 HARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHY 325

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV--------FESMVKEYGIL 555
           R+A+ L+ +M  EG+     T++  L AC+  G +++G+ +        F+S+V    +L
Sbjct: 326 REALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALL 385

Query: 556 PEEAH----------------------YSCMVDLLGRAGKLEIALIFISNLPIKPTAP-- 591
              A                       ++ M+    +AG  + AL     +  + T P  
Sbjct: 386 TMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNE 445

Query: 592 -IWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAG 638
             +  + AAC    DL+    I   +   +   + AV   L  MYA+ G
Sbjct: 446 YTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCG 494



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 120/229 (52%), Gaps = 12/229 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ CS    LE G + H  +  + +  +  V  +LV MYAKCG ++   +  +     D
Sbjct: 451 VLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKD 510

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++  YA++ L  +A   +  +    V P+  T ++ L+ C    ++  G+++H+
Sbjct: 511 LVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHS 570

Query: 243 QTMKLQ-YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           + +K Q + S   V  AL+ MY +CG +E A S+FE + QR+V+SWTA+ + + Q G  +
Sbjct: 571 RVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHAD 630

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           + L L   M   GI PNE TFT  L  C+           HA ++ RG+
Sbjct: 631 QVLDLYLEMVLHGIRPNEITFTSILVGCS-----------HAGLLARGV 668



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKT-AVCGDQFVTASLVNMYAKCGDIKSMV 172
           L D+  +   LS C+    L+LGR  H+ + K  +      V  +LVNMY +CG +++  
Sbjct: 543 LPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETAR 602

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
           ++ + M   D+ S   + + YA+    DQ    +L++    ++PN  T++++L  C    
Sbjct: 603 SMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAG 662

Query: 233 AIDEGKQ--LHAQT------MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRN 283
            +  G +  L  Q+      ++  +L        ++ +  + G + DAE++ E +  Q +
Sbjct: 663 LLARGVECFLEMQSEHEVVPIREHFL-------CMVDLLGRSGRLRDAEALVESMPYQPD 715

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            ++W  ++   K H D +   R    ++E  +DP   +    L+S
Sbjct: 716 SVAWLTVLGSCKTHSDADTAKRAARRVKE--LDPENTSLYSLLSS 758


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/506 (34%), Positives = 294/506 (58%), Gaps = 3/506 (0%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A  F+ ++  + ++PN+ TY  +   C +L A++ G+  H   ++        VS++L+T
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY +CG M DA  VF+ + Q++++SW ++I+G+ +     + + L   M E G  PNE +
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L +C  L +  +G      V++  M L  F+G+A++ MY   G++  A++    M 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM- 289

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           K    V+WNA I G+ +N  +EEAI+ F  M  +  A D+ T   IL AC+ + +L   +
Sbjct: 290 KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK 349

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+     +  F+ +V+VG++L++ Y KCGS ++A RVF  +   + VSWN+MI A + +G
Sbjct: 350 QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHG 409

Query: 502 RARKAIILFEKMVVEG--IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +A++A+ LF+ M+ EG  + P + TF+ VLSAC H+GLV +G+++F  M   +G++P+  
Sbjct: 410 QAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIE 469

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HYSCMVDL  RAG LE A  F+  +P KP   I   L  AC+   ++ ++E + K +LEL
Sbjct: 470 HYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLEL 529

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P ++  YV  S +YA      D+   R LMK K +SK PGCSWI++ ++++ F + +  
Sbjct: 530 EPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVL 589

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHTDN 705
           H E  ++++ L  L+  +   G+  N
Sbjct: 590 HQEWIEIHQILDLLIDDLRREGYIPN 615



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 153/307 (49%), Gaps = 3/307 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS    +E GR  H  + +  +  D  V+ SL+ MYA+CG +     V  ++   D+ S 
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSW 196

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +++GY+K     +A   F ++     QPN  +  ++L  CG L  +  G  +    ++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            +      + +AL+ MY KCG +  A  +F+ + +++ ++W A+I G+ Q+G  E+ ++L
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              MR     P++ T    L++CAS+    +G        +RG     +VGTA+VDMY+ 
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTY 424
            G +  A +    M K  + VSWNA I+    + + +EA+  F  M+        ++ T+
Sbjct: 377 CGSLDNAFRVFYGMPKK-NEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435

Query: 425 SSILKAC 431
             +L AC
Sbjct: 436 VGVLSAC 442



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 129/262 (49%), Gaps = 13/262 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C     L+LG      + +  +  + F+ ++L++MY KCGD+ S   +   M 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N ++ GYA+N + ++A   F  +      P+  T   +L+ C S+ A+D GKQ
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +     +  +     V  AL+ MY KCG +++A  VF G+ ++N +SW A+I+    HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQ 410

Query: 300 YEKPLRLV-CLMREDG-IDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMA 351
            ++ L L   +M E G + PN+ TF   L++C      H G       +FH      G+ 
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACV-----HAGLVDEGRRLFHMMSSSFGLV 465

Query: 352 LGDFVGTAIVDMYSGLGEIWEA 373
                 + +VD++S  G + EA
Sbjct: 466 PKIEHYSCMVDLFSRAGHLEEA 487



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 388 SWNAQIAGFFRN-QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           S+N  I G      K+  A+E +S+M       +  TY  +  ACS L ++      H  
Sbjct: 93  SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +++   + + HV  SLI  Y +CG   DA +VF +++  D+VSWNSMI  YS+   A +A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF +M+  G +P   + ++VL AC   G ++ G  V E  V E  +       S ++ 
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV-EEFVVENKMTLNYFMGSALIH 271

Query: 567 LLGRAGKL 574
           + G+ G L
Sbjct: 272 MYGKCGDL 279



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 25/229 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F+   K+  ++ + +I          G ++NG S         F D   S+T P 
Sbjct: 281 SARRIFDSMKKKDKVTWNAMI---------TGYAQNGMSEEAIKL---FQDMRMSSTAP- 327

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    D+  +I +LS C+    L+LG++     ++     D +V  +LV+MYAKCG
Sbjct: 328 ---------DQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCG 378

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTM 224
            + +   V   MP  +  S N +++  A +    +A + F  +  +G  V PN  T+  +
Sbjct: 379 SLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGV 438

Query: 225 LAICGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           L+ C     +DEG++L H  +     + K    + ++ ++ + G +E+A
Sbjct: 439 LSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 211/629 (33%), Positives = 338/629 (53%), Gaps = 18/629 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C       +GR  HA + +     +  V  +L+ MYAKCGD+ +   V   M  +D
Sbjct: 201 VLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMD 260

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+ +N   +     FL +   +VQPN  T +++    G LS I   K++H 
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + +  A  N+L+ MY   GMM  A +VF  +  R+ +SWTA+I+G++++G  +K
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +  LM  + + P++ T   ALA+CA L +  +G   H     +G      V  A+++
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLE 440

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A +  K M +    VSW++ IAGF  N +  EA+  F  M+  D   +  
Sbjct: 441 MYAKSKRIDKAIEVFKCMPEK-DVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSV 498

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ + L AC+   +L + ++IH+ +++       ++ ++LI+ Y KCG    A   F   
Sbjct: 499 TFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAH 558

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A DVVSWN MI  +  +G    A+  F +MV  G  P   TF+A+L ACS  G+V +G 
Sbjct: 559 GAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW 618

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++F SM  +Y I+P   HY+CMVDLL R G+L  A  FI+ +PI P A +W  L   CR 
Sbjct: 619 ELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRI 678

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  +++ E  +K +LEL+P+DA  +V L ++YA+AG+       RK M+ K +  + GCS
Sbjct: 679 HRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCS 738

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---EDRVLY------ 713
           W+EV   ++ F + ++SH ++ ++   L+ + ++++  G    E    ED+VL       
Sbjct: 739 WVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVESHSPEDKVLKDDIFCG 798

Query: 714 HSERLAVGFGLISLP-------AKNKFEC 735
           HSERLAV FGLI+          KN++ C
Sbjct: 799 HSERLAVAFGLINTTPGTSISVTKNQYTC 827



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 255/532 (47%), Gaps = 7/532 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +   C     +E G R  A            +  ++++M  + G+      V 
Sbjct: 93  DEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVF 152

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  D+ S N ++ GY K  L ++A   + ++    V+P+ YT+  +L  CG +    
Sbjct: 153 AKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWR 212

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+++HA  ++  +  +  V NAL+TMY KCG +  A  VF+ +   + ISW A+I G  
Sbjct: 213 MGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHF 272

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++G+    L L   M +D + PN  T T    +   L +       H   +KRG A    
Sbjct: 273 ENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVA 332

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              +++ MY+ LG + +A+     M  +  ++SW A I+G+ +N   ++A+E ++ M  N
Sbjct: 333 FCNSLIQMYASLGMMGQARTVFSRM-DTRDAMSWTAMISGYEKNGFPDKALEVYALMEVN 391

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           + + D+ T +S L AC+ L SL    ++H       F S V V ++L+E Y K    + A
Sbjct: 392 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKA 451

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  +   DVVSW+SMI  +  N R  +A+  F  M+ + ++P + TF+A L+AC+ +
Sbjct: 452 IEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAAT 510

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G ++ G+++  + V   GI  E    + ++DL  + G+   A         K     W  
Sbjct: 511 GALRSGKEI-HAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVS-WNI 568

Query: 596 LFAACRCHSDLKMAEFISKQILELD--PDDAAVYVTLSNMYAEAGLQADAEE 645
           + A    H + + A     Q++++   PD+   +V L    +  G+ ++  E
Sbjct: 569 MIAGFVAHGNGETALSFFNQMVKIGECPDE-VTFVALLCACSRGGMVSEGWE 619



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 195/408 (47%), Gaps = 4/408 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+   Y  +  +C    A++ G +  A            + NA+L+M ++ G    A  V
Sbjct: 92  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 151

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  + +R+V SW  ++ G+ + G  E+ L L   M   G+ P+ YTF   L SC  + + 
Sbjct: 152 FAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 211

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            MG   HA V++ G A    V  A++ MY+  G++  A+K    M      +SWNA IAG
Sbjct: 212 RMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMA-VMDCISWNAMIAG 270

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            F N +    +E F  M++++   +  T +S+  A  LL  +   +++H   VK  F ++
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATD 330

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V   +SLI+ Y   G    A  VFS++   D +SW +MI  Y +NG   KA+ ++  M V
Sbjct: 331 VAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T  + L+AC+  G +  G K+ E + +  G +      + ++++  ++ +++
Sbjct: 391 NNVSPDDITIASALAACACLGSLDVGVKLHE-LAESKGFMSYVVVTNALLEMYAKSKRID 449

Query: 576 IALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFISKQILELDPD 622
            A+     +P K     W  + A  C  H + +   +    + ++ P+
Sbjct: 450 KAIEVFKCMPEKDVVS-WSSMIAGFCFNHRNFEALYYFRHMLADVKPN 496



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/401 (21%), Positives = 170/401 (42%), Gaps = 20/401 (4%)

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG   + L    L+      P+E  +      C   R    G    A    R    G  +
Sbjct: 75  HGQLAQAL---WLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRL 131

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G A++ M    GE W A +   +M +     SWN  + G+ +    EEA++ + +M+   
Sbjct: 132 GNAMLSMLVRFGETWHAWRVFAKMPER-DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D +T+  +L++C  +P      ++H+ +++  F   V V ++L+  Y KCG    A 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +VF  +   D +SWN+MI  + +NG     + LF  M+ + ++P   T  +V  A   SG
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA---SG 307

Query: 537 LVQD--GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           L+ D    K    +  + G   + A  + ++ +    G +  A    S +  +  A  W 
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR-DAMSWT 366

Query: 595 PLFAACRCHS--DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            + +    +   D  +  +   ++  + PDD  +   L+       L          +K+
Sbjct: 367 AMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVG-------VKL 419

Query: 653 KEISKEPG-CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
            E+++  G  S++ V N +   ++++K   +  +V++ + +
Sbjct: 420 HELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPE 460


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/618 (31%), Positives = 331/618 (53%), Gaps = 17/618 (2%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +  + + E+ L  GR  HA + +      +  V+  LVNMYAKCG I     V + M   
Sbjct: 388  IAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEAR 447

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            D  S N ++    +N   + A   +  +    + P+++   + L+ C  L  +  G+QLH
Sbjct: 448  DRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLH 507

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF-KQHGDY 300
               +K      T+VSNAL+ MY +CG M +   +F  +   +V+SW +I+          
Sbjct: 508  CDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPI 567

Query: 301  EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
             + +++   M + G+ PN+ TF   LA+   L    +G   H+ ++K G+   + V  A+
Sbjct: 568  TESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNAL 627

Query: 361  VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            +  Y+  G++   ++    M     ++SWN+ I+G+  N   +EA++    M+ ++   D
Sbjct: 628  MSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMD 687

Query: 421  EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              T+S +L AC+ + +L    ++H+  ++S  ES+V V S+L++ Y+KCG  + A +VF 
Sbjct: 688  HCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFH 747

Query: 481  QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
             ++  +  SWNSMI  Y+++G  RKA+ +FE+M   G  P + TF++VLSACSH+GLV+ 
Sbjct: 748  SMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVER 807

Query: 541  GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            G   FE M ++YGILP   HYSC++DLLGRAG+L+    ++  +P+KP   IWR +  AC
Sbjct: 808  GLDYFELM-EDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVAC 866

Query: 601  ---RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
               +  + + +    S+ +LEL+P +   YV  S  +A  G   D  + R  MK   + K
Sbjct: 867  QQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKK 926

Query: 658  EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TDNEKEDRVL-- 712
            E G SW+ + + ++ F + ++SH    ++YEKL  L+Q+I + G+   T+    D     
Sbjct: 927  EAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAGYVPLTEYVLHDLEEEN 986

Query: 713  ------YHSERLAVGFGL 724
                  YHSE+LAV F L
Sbjct: 987  KEELLRYHSEKLAVAFVL 1004



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 232/473 (49%), Gaps = 27/473 (5%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +VL    R  C       H  + K  +  D F+   LVN YAK   + +   V   MP  
Sbjct: 70  DVLLRGRRPGCDASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGR 129

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEG-- 237
           +  S  CL++G+  + L + AF  F  +  +G   +P  +T+ ++L  C        G  
Sbjct: 130 NAVSWTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFA 189

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED--AESVFEGLVQRNVISWTAIINGFK 295
            Q+H    K ++ S T V NAL++MY  C +     A+ VF+    R++I+W A+++ + 
Sbjct: 190 VQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYA 249

Query: 296 QHGDYEKPLRLVCLMRED--GID--PNEYTFTVALASCASLRNSHMGYM--FHAQVIKRG 349
           + GD      L   M+ D  GI+  P E+TF  +L +   L +  +G +     +V+K G
Sbjct: 250 KRGDAICTFTLFRAMQYDDSGIELRPTEHTFG-SLITATYLSSCSLGLLDQLFVRVLKSG 308

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            +   +VG+A+V  ++  G + EAK     + K  ++V+ N  IAG  + Q  E A E F
Sbjct: 309 CSSDLYVGSALVSAFARHGMLDEAKDIYLGL-KERNAVTLNGLIAGLVKQQHGEAAAEIF 367

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQ-------IHSRIVKS-KFESNVHVGSS 461
               R+ AA +  TY  +L A   +   +T EQ       +H+ ++++      + V + 
Sbjct: 368 -MGARDSAAVNVDTYVVLLSA---IAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNG 423

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L+  Y KCG+ + A RVF  + A D +SWN++I A  QNG    A++ +  M    I P+
Sbjct: 424 LVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPS 483

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           N   ++ LS+C+  GL+  GQ++    VK +G+  + +  + +V + G  G++
Sbjct: 484 NFAAISGLSSCAGLGLLAAGQQLHCDAVK-WGLYLDTSVSNALVKMYGECGRM 535



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 156/314 (49%), Gaps = 3/314 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I  LS C+    L  G++ H    K  +  D  V+ +LV MY +CG +     +   M  
Sbjct: 488 ISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSA 547

Query: 181 LDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
            D+ S N ++   A + A   ++   F  +    + PN  T+   LA    LS ++ GKQ
Sbjct: 548 HDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQ 607

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHG 298
           +H+  +K       AV NAL++ Y K G ++  E +F  +  +R+ ISW ++I+G+  +G
Sbjct: 608 IHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNG 667

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ +  VCLM       +  TF++ L +CAS+     G   HA  ++  +     V +
Sbjct: 668 HLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVES 727

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+VDMYS  G I  A K    M +  +  SWN+ I+G+ R+    +A+E F +M  +  +
Sbjct: 728 ALVDMYSKCGRIDYASKVFHSMSQK-NEFSWNSMISGYARHGLGRKALEIFEEMQESGES 786

Query: 419 CDEFTYSSILKACS 432
            D  T+ S+L ACS
Sbjct: 787 PDHVTFVSVLSACS 800



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 23/358 (6%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + LH + +K        ++N L+  Y K   ++ A  VF+G+  RN +SWT +I+G    
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 298 GDYEK--PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALG 353
           G  E   PL    L    G  P  +TF   L +C       +G+    H  V K      
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 354 DFVGTAIVDMYS--GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
             V  A++ MY    +G    A++   +       ++WNA ++ + +          F  
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVF-DTTPVRDLITWNALMSVYAKRGDAICTFTLFRA 263

Query: 412 MVRNDAACD----EFTYSSILKACSLLP-SLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           M  +D+  +    E T+ S++ A  L   SL   +Q+  R++KS   S+++VGS+L+ A+
Sbjct: 264 MQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAY--SQNGRARKAIILFEKMVVEGIRPTNST 524
            + G  ++A+ ++  L   + V+ N +I      Q+G A   I +  +   +       T
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGAR---DSAAVNVDT 380

Query: 525 FLAVLSA-----CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++ +LSA      +  GL + G++V   +++   I  + A  + +V++  + G ++ A
Sbjct: 381 YVVLLSAIAEFSTAEQGL-RKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKA 437



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E ++D      VL+ C+    LE G   HA   ++ +  D  V ++LV+MY+KCG I   
Sbjct: 683 EQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYA 742

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V   M   +  S N +++GYA++ L  +A   F ++      P+H T+ ++L+ C   
Sbjct: 743 SKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHA 802

Query: 232 SAIDEG 237
             ++ G
Sbjct: 803 GLVERG 808


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 215/714 (30%), Positives = 368/714 (51%), Gaps = 44/714 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN------------------GYSTRN 88
           +A +LF++ P +  +ST+ +I  GY+       +R+                  GY+  N
Sbjct: 60  AARKLFDEMPHKNVISTNTMIM-GYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHN 118

Query: 89  DSFPDGF--IDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKT 146
             F + F    D C + +     +L +LL          +   E   E+ +  H  + K 
Sbjct: 119 -RFLEAFNLFADMCRHGMVPDHITLATLLS--------GFTEFESVNEVAQ-VHGHVVKV 168

Query: 147 AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF 206
                  V  SL++ Y K   +     + K M   D  + N LL GY+K      A + F
Sbjct: 169 GYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLF 228

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
            K+  +  +P+ +T++ +L     +  I+ G+Q+H+  +K  ++    V+NALL  Y K 
Sbjct: 229 FKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKH 288

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             + +A  +F  + + + IS+  +I     +G  E+ L L   ++    D  ++ F   L
Sbjct: 289 DRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           +  A+  N  MG   H+Q I         VG ++VDMY+   +  EA +   ++    SS
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQ-SS 407

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V W A I+G+ +    E+ ++ F +M R     D  TY+SIL+AC+ L SL   +Q+HSR
Sbjct: 408 VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSR 467

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           I++S   SNV  GS+L++ Y KCGS ++A ++F ++   + VSWN++I AY+QNG    A
Sbjct: 468 IIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHA 527

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           +  FE+M+  G++P + +FL++L ACSH GLV++G + F SM + Y + P   HY+ MVD
Sbjct: 528 LRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVD 587

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAA 625
           +L R+G+ + A   ++ +P +P   +W  +  +CR H + ++A   + Q+  +    DAA
Sbjct: 588 MLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAA 647

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            YV++SN+YA AG      + +K ++ + I K P  SW+E+  K + F + + SH +  +
Sbjct: 648 PYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKE 707

Query: 686 VYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGLISLP 728
           +  KL +L +Q+E+ G+           D E K + + YHSER+A+ F LIS P
Sbjct: 708 ITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTP 761


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 202/616 (32%), Positives = 327/616 (53%), Gaps = 16/616 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  HA + + A   D      L+  Y KCG +     +   MP  +  S N L++GYA 
Sbjct: 30  GKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYAS 88

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
                 A +    L   D   N Y  ST L+    + +   G+Q H   +K        V
Sbjct: 89  AGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYV 145

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NA+L MY +C  +EDA  VFE +   ++ ++ ++INGF   G+++  +R+V  M  +  
Sbjct: 146 CNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVE 205

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             +  ++   L  CAS +   +G   HAQ +KR +    +VG+A+VDMY       +A  
Sbjct: 206 QWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHS 265

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              E+    + VSW A +  + +N++ E+A++ F  +       +EFTY+  L +C+ L 
Sbjct: 266 AF-EVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLA 324

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L     + +  +K+     + V ++L+  Y+K GS  DA RVF  +   DVVSWNS+I 
Sbjct: 325 ALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVII 384

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+ +G AR+A+ +F  M++  I P+  TF+ VL AC+  GLV +G      M+KE GI 
Sbjct: 385 GYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIK 444

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMV LL RAG+L+ A  FI +  I      W+ L ++C+ + +  +   +++Q
Sbjct: 445 PGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQ 504

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           IL+L P+D   YV LSNMYA+A       + RKLM+ + + KEPG SWI+V ++++ F S
Sbjct: 505 ILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTS 564

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGL 724
           ++K+H  + ++  KLK+L+ QI+ IG+  N           +KE+ ++YHSE++A+ FGL
Sbjct: 565 EDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMALAFGL 624

Query: 725 ISLPAKNKFECSRTLE 740
           I  P        + L 
Sbjct: 625 IHSPEGETIRIMKNLR 640


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 195/625 (31%), Positives = 331/625 (52%), Gaps = 15/625 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS ++ L L    HA         + FV ++LV++Y K   +     V   MP  D    
Sbjct: 121 CSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLW 177

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G  KN  FD +   F ++    V+ +  T + +L     L  +  G  +    +K
Sbjct: 178 NTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALK 237

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           + +     V   L+++Y KCG +  A  +F  + + ++I++ A+I+GF  +G  E  ++L
Sbjct: 238 IGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKL 297

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              +   G   +  T    +   +   + H+    H   +K G+ L   V TA   +Y+ 
Sbjct: 298 FRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNK 357

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
           L EI +  + L +     + V+WNA I+G+ +N  TE AI  F +M++ +   +  T ++
Sbjct: 358 LNEI-DLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITT 416

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL AC+ L SL+  + +H  I     E N++V ++L++ Y KCG+  +A ++F  ++  +
Sbjct: 417 ILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKN 476

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+WN+MI  Y  +G   +A+ L+ +M+  G  P+  TFL+VL ACSH+GLV +G+++F 
Sbjct: 477 TVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFH 536

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +MV +Y I P   HY+CMVD+LGR+G+LE AL FI  +P++P   +W  L  AC  H D 
Sbjct: 537 NMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDT 596

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            +A   S+++ ELDP     YV LSN+Y+       A   R+++K ++++K PGC+ IEV
Sbjct: 597 DIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEV 656

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHS 715
               + F S ++SHS    +Y KL++L  ++ ++G+            + EKE  V  HS
Sbjct: 657 NGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHS 716

Query: 716 ERLAVGFGLISLPAKNKFECSRTLE 740
           E+LA+ FGLI+    N+    + L 
Sbjct: 717 EKLAIAFGLITTEPGNEIRIIKNLR 741



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/362 (23%), Positives = 168/362 (46%), Gaps = 2/362 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   V  VL   +  + L++G     L  K       +V   L+++Y+KCGD+ +   +
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +++   D+ + N +++G+  N   + +   F +L     + +  T   ++ +      +
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
                +H   +K   +    VS A   +Y K   ++ A  +F+   ++ V++W A+I+G+
Sbjct: 327 HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGY 386

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+G  E  + L   M +    PN  T T  L++CA L +   G   H  +    +    
Sbjct: 387 TQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNI 446

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V TA+VDMY+  G I EA +    M +  ++V+WN  I G+  +    EA++ +++M+ 
Sbjct: 447 YVSTALVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEMLH 505

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                   T+ S+L ACS    +   E+I H+ + K + E  +   + +++   + G  E
Sbjct: 506 LGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLE 565

Query: 474 DA 475
            A
Sbjct: 566 KA 567



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 182/413 (44%), Gaps = 9/413 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +T+ ++    S      Q HAQ +   Y    A    L            A ++F  + +
Sbjct: 13  NTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPK 72

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            ++  +  ++ GF  +      + L   L R   + P+ +T+  A+A+C++  + H+  +
Sbjct: 73  PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSN--DKHL-ML 129

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA  I  G     FVG+A+VD+Y     +  A+K    M +   +V WN  I G  +N 
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPER-DTVLWNTMINGLVKNC 188

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +++I+ F +MV +    D  T +++L A + L  L     I    +K  F    +V +
Sbjct: 189 CFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT 248

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            LI  Y+KCG    A  +F ++   D++++N+MI  ++ NG    ++ LF +++  G R 
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
           ++ST + ++   S  G +     +    VK  GI+      +    +  +  ++++A   
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKS-GIILNPTVSTAFTAIYNKLNEIDLARHL 367

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLS 631
               P K T   W  + +    +   + A  + K+++  E  P+   +   LS
Sbjct: 368 FDESPEK-TVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/362 (20%), Positives = 150/362 (41%), Gaps = 50/362 (13%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYS-TRNDSFPDGFIDDGCSNTVPV 106
           A  LF++SP++  ++ + +I          G ++NG + T    F +    +   N V +
Sbjct: 364 ARHLFDESPEKTVVAWNAMI---------SGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           T               +LS C++   L  G+  H LI    +  + +V+ +LV+MYAKCG
Sbjct: 415 T--------------TILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCG 460

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           +I     +   M   +  + N ++ GY  +    +A   + ++  +   P+  T+ ++L 
Sbjct: 461 NISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLY 520

Query: 227 ICGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNV 284
            C     + EG+++ H    K +          ++ +  + G +E A E + +  V+   
Sbjct: 521 ACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGP 580

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
             W  ++     H D +  +  +   R   +DP    + V L++  S+  +        Q
Sbjct: 581 AVWGTLLGACMIHKDTD--IARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQ 638

Query: 345 VIKR-------GMALGDFVGTAIV------------DMYSGLGEIWEAKKQLKEMGKSAS 385
           V+K+       G  L +  GT  V            D+Y+ L ++     +++EMG  A 
Sbjct: 639 VVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKL---TGKMREMGYQAE 695

Query: 386 SV 387
           +V
Sbjct: 696 TV 697


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 187/597 (31%), Positives = 327/597 (54%), Gaps = 13/597 (2%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V  +L++ Y K G + +   V ++MP+ D  + N ++ G +K     +A   F  +    
Sbjct: 177 VCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKG 236

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           +    +T+ST+L +   +  +  G+Q+H    +    S   V+N+LL  Y KC  +++ +
Sbjct: 237 LAATRFTFSTVLTVATGVGDLCLGRQVHGLVARATS-SNVFVNNSLLDFYSKCDCLDEMK 295

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F  +++R+ +S+  +I G+  +      LRL   M+    D     +   L+   S+ 
Sbjct: 296 KLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVP 355

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +  +G   HAQ++  G++  D VG A++DMYS  G +  AK          + VSW A I
Sbjct: 356 HIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFIN-KNDKTGVSWTAMI 414

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G  +N + EEA++ F  M R   + D  T+SS +KA S L  +    Q+HS +++S   
Sbjct: 415 TGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHM 474

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S+V  GS+L++ Y KCG  ++A + F ++   + +SWN++I AY+  G+A+ AI +FE M
Sbjct: 475 SSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGM 534

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +  G +P + TFL+VLSACSH+GL ++  K FE M  EYGI P + HYSC++D LGR G+
Sbjct: 535 LCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGR 594

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
            +     +  +P +    IW  +  +CR H +  +A   ++++  +   DA  YV LSN+
Sbjct: 595 FDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNI 654

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           +A+AG   DA   +K+M+ + + KE G SW+EV +K+Y F S ++++  + ++ ++L++L
Sbjct: 655 FAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERL 714

Query: 694 MQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
            ++++  G+            D+ K + + YHSERLA+ F LI+ P        + L
Sbjct: 715 YKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNL 771



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 221/434 (50%), Gaps = 14/434 (3%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L LGR+ H L+ + A   + FV  SL++ Y+KC  +  M  +  +M   D  S N ++AG
Sbjct: 257 LCLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAG 315

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA N         F ++  +        Y+++L++ GS+  I  GKQ+HAQ + L   S+
Sbjct: 316 YAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSE 375

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY KCGM++ A++ F     +  +SWTA+I G  Q+G  E+ L+L C MR 
Sbjct: 376 DLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR 435

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G+ P+  TF+  + + ++L    +G   H+ +I+ G     F G+A++DMY+  G + E
Sbjct: 436 AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDE 495

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A +   EM +  +S+SWNA I+ +    + + AI+ F  M+      D  T+ S+L ACS
Sbjct: 496 ALQTFDEMPER-NSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVG----SSLIEAYNKCGSWEDAERVFSQLT-AADV 487
                  C +    +   ++E  +       S +I+   + G ++  + +  ++    D 
Sbjct: 555 HNGLAEECMKYFELM---EYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDP 611

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFE 546
           + W+S++ +   +G    A +  EK+   G   T++T   +LS   + +G  +D   V +
Sbjct: 612 IIWSSILHSCRTHGNQDLARVAAEKLFSMG--STDATPYVILSNIFAKAGKWEDAAGV-K 668

Query: 547 SMVKEYGILPEEAH 560
            ++++ G+  E  +
Sbjct: 669 KIMRDRGLRKETGY 682



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 250/550 (45%), Gaps = 24/550 (4%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAV-VKQMPYL-DIASCNCLLAGYAK--NALFDQAFSFF 206
           + F    +++ Y++ G + +   + +   P+L D  +   ++  +A    A    A S F
Sbjct: 65  NAFSLNRMLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLF 124

Query: 207 LKLDGIDVQPNHYTYSTMLAI---CGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTM 262
             +    V P+  T +T+L +    G  +A      LH   +KL  L S   V N LL  
Sbjct: 125 RDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDA 184

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y K G++  A  VF+ +  R+ +++ A++ G  + G + + L L   MR  G+    +TF
Sbjct: 185 YCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTF 244

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           +  L     + +  +G   H  ++ R  +   FV  +++D YS    + E KK   EM +
Sbjct: 245 STVLTVATGVGDLCLGRQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIE 303

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
              +VS+N  IAG+  N+     +  F +M           Y+S+L     +P +   +Q
Sbjct: 304 R-DNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQ 362

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH+++V     S   VG++LI+ Y+KCG  + A+  F        VSW +MI    QNG+
Sbjct: 363 IHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQ 422

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             +A+ LF  M   G+ P  +TF + + A S+  ++  G+++   +++  G +      S
Sbjct: 423 QEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRS-GHMSSVFSGS 481

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELD 620
            ++D+  + G L+ AL     +P + +   W  + +A   +   K A  + + +L     
Sbjct: 482 ALLDMYTKCGCLDEALQTFDEMPERNSIS-WNAVISAYAHYGQAKNAIKMFEGMLCYGFK 540

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS------KEPGCSWIEVYNKIYRFF 674
           P D+  ++++ +  +  GL   AEE  K  ++ E        KE     I+   ++ RF 
Sbjct: 541 P-DSVTFLSVLSACSHNGL---AEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFD 596

Query: 675 SQNKSHSEMP 684
              +   EMP
Sbjct: 597 KVQEMLGEMP 606



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 122/558 (21%), Positives = 224/558 (40%), Gaps = 107/558 (19%)

Query: 94  GFIDDGCSNTVPVTCYSLESL-LDKQFV--IEVLSYCSREECLELGRRYHALITKTAVCG 150
           G+  + C++ V      ++SL  D+Q +    +LS       + +G++ HA +    +  
Sbjct: 315 GYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSS 374

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           +  V  +L++MY+KCG + +              S   ++ G  +N   ++A   F  + 
Sbjct: 375 EDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMR 434

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              + P+  T+S+ +    +L+ I  G+QLH+  ++  ++S     +ALL MY KCG ++
Sbjct: 435 RAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLD 494

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A   F+ + +RN ISW A+I+ +  +G  +  +++   M   G  P+  TF   L++C+
Sbjct: 495 EALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK----EMGKSASS 386
                                            ++GL E  E  K  +    E G S   
Sbjct: 555 ---------------------------------HNGLAE--ECMKYFELMEYEYGISPWK 579

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
             ++  I    R  + ++  E   +M   D   D   +SSIL +C          Q  +R
Sbjct: 580 EHYSCVIDTLGRVGRFDKVQEMLGEMPFED---DPIIWSSILHSCR-----THGNQDLAR 631

Query: 447 IVKSKFESNVHVGSS-------LIEAYNKCGSWEDA--------ERVFSQLTAADVVSWN 491
           +   K  S   +GS+       L   + K G WEDA        +R   + T    V   
Sbjct: 632 VAAEKLFS---MGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVK 688

Query: 492 SMIKAYSQNGRARKAII--------LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + ++S N +    I         L+++M  +G +P  S  L               Q+
Sbjct: 689 HKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTL---------------QQ 733

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           V + +  E               L   + +L IA   I+  P  P   + + L A   CH
Sbjct: 734 VDDDIKLE--------------SLKYHSERLAIAFALINTPPGTPIR-VMKNLSACVDCH 778

Query: 604 SDLK-MAEFISKQILELD 620
           S +K M++ +++ I+  D
Sbjct: 779 SAIKMMSKIVNRDIIVRD 796



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 10/242 (4%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M + G DP  Y   + L S  S            Q+  R  A   F    ++  YS  G+
Sbjct: 25  MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNA---FSLNRMLSGYSRSGQ 81

Query: 370 IWEAKKQ-LKEMGKSASSVSWNAQIAGFFR--NQKTEEAIEAFSQMVRNDAACDEFTYSS 426
           +  A    L        +V+W   I  F      +  +A+  F  M+R   A D  T ++
Sbjct: 82  LSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVAT 141

Query: 427 ILK---ACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +L    A     +      +H   +K     SNV V ++L++AY K G    A RVF ++
Sbjct: 142 VLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEM 201

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D V++N+M+   S+ G   +A+ LF  M  +G+  T  TF  VL+  +  G +  G+
Sbjct: 202 PHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGR 261

Query: 543 KV 544
           +V
Sbjct: 262 QV 263


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/506 (34%), Positives = 294/506 (58%), Gaps = 3/506 (0%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A  F+ ++  + ++PN+ TY  +   C +L A++ G+  H   ++        VS++L+T
Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY +CG M DA  VF+ + Q++++SW ++I+G+ +     + + L   M E G  PNE +
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L +C  L +  +G      V++  M L  F+G+A++ MY   G++  A++    M 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM- 289

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           K    V+WNA I G+ +N  +EEAI+ F  M  +  A D+ T   IL AC+ + +L   +
Sbjct: 290 KKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK 349

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+     +  F+ +V+VG++L++ Y KCGS ++A RVF  +   + VSWN+MI A + +G
Sbjct: 350 QVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHG 409

Query: 502 RARKAIILFEKMVVEG--IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +A++A+ LF+ M+ EG  + P + TF+ VLSAC H+GLV +G+++F  M   +G++P+  
Sbjct: 410 QAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIE 469

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HYSCMVDL  RAG LE A  F+  +P KP   I   L  AC+   ++ ++E + K +LEL
Sbjct: 470 HYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLEL 529

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
           +P ++  YV  S +YA      D+   R LMK K +SK PGCSWI++ ++++ F + +  
Sbjct: 530 EPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVL 589

Query: 680 HSEMPKVYEKLKQLMQQIEDIGHTDN 705
           H E  ++++ L  L+  +   G+  N
Sbjct: 590 HQEWIEIHQILDLLIDDLRREGYIPN 615



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 3/307 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS    +E GR  H  + +  +  D  V+ SL+ MYA+CG +     V  ++   D+ S 
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSW 196

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +++GY+K     +A   F ++     QPN  +  ++L  CG L  +  G  +    ++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            +      + +AL+ MY KCG +  A  +F+ + +++ ++W A+I G+ Q+G  E+ ++L
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKL 316

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              MR     P++ T    L++CAS+    +G        +RG     +VGTA+VDMY+ 
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTY 424
            G +  A +    M  + + VSWNA I+    + + +EA+  F  M+        ++ T+
Sbjct: 377 CGSLDNAFRVFYGM-PNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITF 435

Query: 425 SSILKAC 431
             +L AC
Sbjct: 436 VGVLSAC 442



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 128/262 (48%), Gaps = 13/262 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C     L+LG      + +  +  + F+ ++L++MY KCGD+ S   +   M 
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  + N ++ GYA+N + ++A   F  +      P+  T   +L+ C S+ A+D GKQ
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +     +  +     V  AL+ MY KCG +++A  VF G+  +N +SW A+I+    HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQ 410

Query: 300 YEKPLRLV-CLMREDG-IDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMA 351
            ++ L L   +M E G + PN+ TF   L++C      H G       +FH      G+ 
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACV-----HAGLVDEGRRLFHMMSSSFGLV 465

Query: 352 LGDFVGTAIVDMYSGLGEIWEA 373
                 + +VD++S  G + EA
Sbjct: 466 PKIEHYSCMVDLFSRAGHLEEA 487



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 2/188 (1%)

Query: 388 SWNAQIAGFFRN-QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           S+N  I G      K+  A+E +S+M       +  TY  +  ACS L ++      H  
Sbjct: 93  SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           +++   + + HV  SLI  Y +CG   DA +VF +++  D+VSWNSMI  YS+   A +A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF +M+  G +P   + ++VL AC   G ++ G  V E  V E  +       S ++ 
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV-EEFVVENKMTLNYFMGSALIH 271

Query: 567 LLGRAGKL 574
           + G+ G L
Sbjct: 272 MYGKCGDL 279



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 25/229 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++F+   K+  ++ + +I          G ++NG S         F D   S+T P 
Sbjct: 281 SARRIFDSMKKKDKVTWNAMI---------TGYAQNGMSEEAIKL---FQDMRMSSTAP- 327

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    D+  +I +LS C+    L+LG++     ++     D +V  +LV+MYAKCG
Sbjct: 328 ---------DQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCG 378

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTM 224
            + +   V   MP  +  S N +++  A +    +A + F  +  +G  V PN  T+  +
Sbjct: 379 SLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGV 438

Query: 225 LAICGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
           L+ C     +DEG++L H  +     + K    + ++ ++ + G +E+A
Sbjct: 439 LSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 211/629 (33%), Positives = 338/629 (53%), Gaps = 18/629 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C       +GR  HA + +     +  V  +L+ MYAKCGD+ +   V   M  +D
Sbjct: 195 VLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMD 254

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+ +N   +     FL +   +VQPN  T +++    G LS +   K++H 
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +    A  N+L+ MY   GMM  A +VF  +  R+ ++WTA+I+G++++G  +K
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +  LM  + + P++ T   ALA+CA L +  +G   H     +G      V  AI++
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILE 434

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A +  K M +    VSW++ IAGF  N +  EA+  F  M+  D   +  
Sbjct: 435 MYAKSKRIDKAIEVFKCMHEK-DVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSV 492

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ + L AC+   +L + ++IH+ +++   E   ++ ++LI+ Y KCG    A   F   
Sbjct: 493 TFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAH 552

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            A DVVSWN MI  +  +G    A+  F +MV  G  P   TF+A+L ACS  G+V +G 
Sbjct: 553 GAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGW 612

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++F SM ++Y I+P   HY+CMVDLL RAG+L  A  FI+ +PI P A +W  L   CR 
Sbjct: 613 ELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRI 672

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  +++ E  +K +L L+P+DA  +V L ++YA+A L       RK M+ K +  + GCS
Sbjct: 673 HRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCS 732

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---EDRVLY------ 713
           W+EV   ++ F + ++SH ++ ++   L+ + ++++  G+   E    ED VL       
Sbjct: 733 WVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVESHCPEDEVLKDDIFCG 792

Query: 714 HSERLAVGFGLISLP-------AKNKFEC 735
           HSERLAV FGLI+          KN++ C
Sbjct: 793 HSERLAVAFGLINTTPGTSISVTKNQYTC 821



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 232/462 (50%), Gaps = 11/462 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+   + +   C     +E G R  A            +  ++++M  + G+      V 
Sbjct: 87  DEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVF 146

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  D+ S N ++ GY K+ L D+A   + ++    V+P+ YT+  +L  CG +    
Sbjct: 147 AKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWR 206

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+++HA  ++  +  +  V NAL+TMY KCG +  A  VF+ +   + ISW A+I G  
Sbjct: 207 MGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHF 266

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++G+    L L   M  D + PN  T T    +   L +       H   +KRG A    
Sbjct: 267 ENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVA 326

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
              +++ MY+ LG + +A+     M  +  +++W A I+G+ +N   ++A+E ++ M  N
Sbjct: 327 FCNSLIQMYASLGMMRQARTVFSRM-DTRDAMTWTAMISGYEKNGFPDKALEVYALMEVN 385

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           + + D+ T +S L AC+ L SL    ++H       F S + V ++++E Y K    + A
Sbjct: 386 NVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKA 445

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  +   DVVSW+SMI  +  N R  +A+  F  M+ + ++P + TF+A L+AC+ +
Sbjct: 446 IEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAAT 504

Query: 536 GLVQDGQKVFESMVK---EY-GILPEEAHYSCMVDLLGRAGK 573
           G ++ G+++   +++   EY G LP     + ++DL  + G+
Sbjct: 505 GALRSGKEIHAHVLRCGIEYEGYLP-----NALIDLYVKCGQ 541



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 191/408 (46%), Gaps = 4/408 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+   Y  +  +C    A++ G +  A            + NA+L+M ++ G    A  V
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 145

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  + +R+V SW  ++ G+ + G  ++ L L   M   G+ P+ YTF   L SC  + + 
Sbjct: 146 FAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDW 205

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            MG   HA V++ G      V  A++ MY+  G++  A+K    M      +SWNA IAG
Sbjct: 206 RMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSM-TVMDCISWNAMIAG 264

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            F N +    +E F  M+ ++   +  T +S+  A  LL  +   +++H   VK  F  +
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGD 324

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V   +SLI+ Y   G    A  VFS++   D ++W +MI  Y +NG   KA+ ++  M V
Sbjct: 325 VAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEV 384

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T  + L+AC+  G +  G K+ E + +  G +      + ++++  ++ +++
Sbjct: 385 NNVSPDDITIASALAACACLGSLDVGVKLHE-LAESKGFISYIVVTNAILEMYAKSKRID 443

Query: 576 IALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFISKQILELDPD 622
            A+     +  K     W  + A  C  H + +   +    + ++ P+
Sbjct: 444 KAIEVFKCMHEKDVVS-WSSMIAGFCFNHRNFEALYYFRHMLADVKPN 490



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 166/381 (43%), Gaps = 17/381 (4%)

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E  +      C   R    G    A    R    G  +G A++ M    GE W A + 
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRV 145

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
             +M +     SWN  + G+ ++   +EA++ + +M+      D +T+  +L++C  +P 
Sbjct: 146 FAKMPER-DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 204

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
                ++H+ +++  F   V V ++L+  Y KCG    A +VF  +T  D +SWN+MI  
Sbjct: 205 WRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ--KVFESMVKEYGI 554
           + +NG     + LF  M+ + ++P   T  +V  A   SGL+ D    K    +  + G 
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA---SGLLSDVTFAKEMHGLAVKRGF 321

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS--DLKMAEFI 612
             + A  + ++ +    G +  A    S +  +  A  W  + +    +   D  +  + 
Sbjct: 322 AGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR-DAMTWTAMISGYEKNGFPDKALEVYA 380

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG-CSWIEVYNKIY 671
             ++  + PDD  +   L+       L          +K+ E+++  G  S+I V N I 
Sbjct: 381 LMEVNNVSPDDITIASALAACACLGSLDVG-------VKLHELAESKGFISYIVVTNAIL 433

Query: 672 RFFSQNKSHSEMPKVYEKLKQ 692
             ++++K   +  +V++ + +
Sbjct: 434 EMYAKSKRIDKAIEVFKCMHE 454


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 186/579 (32%), Positives = 306/579 (52%), Gaps = 7/579 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   H    K  +    FV ++L++MY K G+I     V  +MP  +  +   ++ G  +
Sbjct: 135 GTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVR 194

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               +   ++F  +    V+ + Y Y+  L       A++ G+ +H QT+K  +   + V
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFV 254

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +N+L TMY KCG ++     F  +   +V+SWT I+  + Q G  +  L+    MR   +
Sbjct: 255 ANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNV 314

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PNEYTF+  ++ CA+      G   HA V+  G      V  +I+ +YS  GE+    K
Sbjct: 315 IPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSK 374

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M K    ++W+  IA + +    EEA E  S+M       +EF  +S+L  C  + 
Sbjct: 375 VFCSM-KFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMA 433

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   +Q+H+ ++    E    V S+LI  Y KCGS  +A ++F      D++SW +MI 
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+++G +++AI LFE +   G+RP + TF+ VL+ACSH+G+V  G   F SM K+Y I 
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHIT 553

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P + HY CM+DLL RAG+L  A   I ++PI+    +W  L  ACR H D+   +  + +
Sbjct: 554 PSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAE 613

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           +L+LDP+ A  ++TL+N++A  G   +A   R LMK K + KEPG S ++V + ++ F S
Sbjct: 614 VLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVS 673

Query: 676 QNKSHSEMPKVYEKLKQLMQQIE----DIGH--TDNEKE 708
            ++SH +   +Y  L++L   +E    ++ H  TD+ +E
Sbjct: 674 GDRSHPQGEDIYNILEELASGMEIYILELNHLVTDDSEE 712



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 212/467 (45%), Gaps = 47/467 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           +C++F++ P R  ++ + +I          G+ R GYS    ++  G       + V   
Sbjct: 170 SCKVFDEMPTRNAVTWTAVI---------TGLVRAGYSEAGLAYFSGM----GRSKVEYD 216

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+        + I  L   +    L  GR  H    K     + FV  SL  MY KCG 
Sbjct: 217 SYA--------YAI-ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           +   +   ++M  LD+ S   ++  Y +    D     F ++   +V PN YT+S +++ 
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C + + +  G+QLHA  + + +++  +V+N+++T+Y KCG +     VF  +  R++I+W
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           + II  + Q G  E+    +  MR +G  PNE+     L+ C S+     G   HA V+ 
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+     V +A++ MY+  G I EA K   +  K    +SW A I+G+  +  ++EAIE
Sbjct: 448 VGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEAIE 506

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSS 461
            F  + +     D  T+  +L ACS           H+ +V   F        + H+  S
Sbjct: 507 LFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFNSMSKDYHITPS 555

Query: 462 ------LIEAYNKCGSWEDAERVFSQLTAA-DVVSWNSMIKAYSQNG 501
                 +I+   + G   DAE +   +    D V W+++++A   +G
Sbjct: 556 KEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 230/485 (47%), Gaps = 9/485 (1%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPN 217
           + +  K   +K    +  Q+P  D  S   +++GY  ++   +A   F K+    +++ +
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +  S  L  CG       G  LH  ++K   ++   V +ALL MY+K G +  +  VF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  RN ++WTA+I G  + G  E  L     M    ++ + Y + +AL + A     + 
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H Q +K+G     FV  ++  MY+  G++       ++M ++   VSW   +  + 
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM-RTLDVVSWTTIVTAYI 294

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +  K +  ++AF +M  ++   +E+T+S+++  C+    L   EQ+H+ ++   F + + 
Sbjct: 295 QMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS 354

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           V +S++  Y+KCG      +VF  +   D+++W+++I AYSQ G   +A     +M  EG
Sbjct: 355 VANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEG 414

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EI 576
            +P      +VLS C    +++ G+++  + V   G+       S ++ +  + G + E 
Sbjct: 415 PKPNEFALASVLSVCGSMAILEQGKQL-HAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473

Query: 577 ALIFISNLPIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + IF+ +   K     W  + +  A   HS   +  F + Q + L P D+  ++ +    
Sbjct: 474 SKIFMDSW--KDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRP-DSVTFIGVLTAC 530

Query: 635 AEAGL 639
           + AG+
Sbjct: 531 SHAGM 535



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 172/331 (51%), Gaps = 13/331 (3%)

Query: 223 TMLAICGSLSAIDEGKQLHAQ----TMKLQYLSKT--AVSNALLTMYIKCGMMEDAESVF 276
           T+LA+ G+ +  D  + L+ +    T+   + +K   A +N  L + +K   ++DA  +F
Sbjct: 14  TVLAVAGAKTN-DNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLF 72

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCASLR 333
           + L QR+ +SWT II+G+    D  + LRL   MR   E  IDP  +  ++ L +C    
Sbjct: 73  DQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDP--FLLSLGLKTCGLGL 130

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           N   G   H   +K G+    FVG+A++DMY  +GEI  + K   EM  + ++V+W A I
Sbjct: 131 NYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEM-PTRNAVTWTAVI 189

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G  R   +E  +  FS M R+    D + Y+  LKA +   +L     IH++ +K  F+
Sbjct: 190 TGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFD 249

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N  V +SL   YNKCG  +     F ++   DVVSW +++ AY Q G+    +  F++M
Sbjct: 250 ENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRM 309

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
               + P   TF AV+S C++   ++ G+++
Sbjct: 310 RASNVIPNEYTFSAVISCCANFARLKWGEQL 340


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/612 (33%), Positives = 329/612 (53%), Gaps = 10/612 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C       +GR  HA + +     +  V  +LV MYAKCGDI +   V   M   D
Sbjct: 203 VLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTD 262

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AG+ +N   +     FL +   +VQPN  T +++    G LS +   K++H 
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +    A  N+L+ MY   G M DA  +F  +  ++ +SWTA+I+G++++G  +K
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +  LM    + P++ T   ALA+CA L    +G   H     +G      V  A+++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A +  K M +    VSW++ IAGF  N ++ EA+  F  M+      +  
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEK-DVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSV 500

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ + L AC+   +L + ++IH+ +++    S  +V ++L++ Y KCG    A   FS  
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVH 560

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  DVVSWN M+  +  +G    A+ LF +MV  G  P   TF+A+L ACS +G+V  G 
Sbjct: 561 SEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGW 620

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           ++F  M +++ I+P   HY+CMVDLL R GKL  A   I+ +PIKP A +W  L   CR 
Sbjct: 621 ELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRI 680

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  +++ E  +K ILEL+P+D A +V L ++Y +AG  A     RK M+ K + ++ GCS
Sbjct: 681 HRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCS 740

Query: 663 WIEVYNKIYRFFSQNKSHSEMPK-------VYEKLKQL-MQQIEDIGHTDNEKEDRVLYH 714
           W+EV    + F + ++SH ++ +       +YE++K      +E +   +  ++D +  H
Sbjct: 741 WVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGH 800

Query: 715 SERLAVGFGLIS 726
           SERLAV FGLI+
Sbjct: 801 SERLAVAFGLIN 812



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 246/498 (49%), Gaps = 5/498 (1%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++++M  + G+I     V  +MP  D+ S N ++ GY K    ++A   + ++    ++P
Sbjct: 136 AMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRP 195

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + YT+  +L  CG +     G+++HA  ++  +  +  V NAL+TMY KCG +  A  VF
Sbjct: 196 DVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVF 255

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           +G+   + ISW A+I G  ++ + E  L L   M E+ + PN  T T    +   L    
Sbjct: 256 DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVG 315

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                H   +KRG A+      +++ MY+ LG + +A K    M ++  ++SW A I+G+
Sbjct: 316 FAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRM-ETKDAMSWTAMISGY 374

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N   ++A+E ++ M  ++ + D+ T +S L AC+ L  L    ++H       F   V
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V ++L+E Y K    + A  VF  +   DVVSW+SMI  +  N R+ +A+  F  M+  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH 494

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            ++P + TF+A LSAC+ +G ++ G+++  + V   GI  E    + ++DL  + G+   
Sbjct: 495 -VKPNSVTFIAALSACAATGALRSGKEI-HAYVLRCGIGSEGYVPNALLDLYVKCGQTSY 552

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL-DPDDAAVYVTLSNMYA 635
           A    S    K     W  + +    H    +A  +  Q++E+ +  D   +V L    +
Sbjct: 553 AWAQFSVHSEKDVVS-WNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACS 611

Query: 636 EAGLQADAEEQRKLMKMK 653
            AG+     E   +M  K
Sbjct: 612 RAGMVIQGWELFHMMTEK 629



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 204/437 (46%), Gaps = 4/437 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+   Y  +  +C    A+D G +  A+           + NA+L+M ++ G +  A  V
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  + +R+V SW  ++ G+ + G  E+ L L   M   G+ P+ YTF   L +C  + + 
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            MG   HA V++ G      V  A+V MY+  G+I  A+K    M  +   +SWNA IAG
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT-DCISWNAMIAG 272

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            F N + E  +E F  M+ N+   +  T +S+  A  +L  +   +++H   VK  F  +
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V   +SLI+ Y   G   DA ++FS++   D +SW +MI  Y +NG   KA+ ++  M +
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
             + P + T  + L+AC+  G +  G K+ E + +  G +      + ++++  ++  ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 576 IALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
            A+     +  K     W  + A  C  H   +   +    +  + P+       LS   
Sbjct: 452 KAIEVFKFMAEKDVVS-WSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACA 510

Query: 635 AEAGLQADAEEQRKLMK 651
           A   L++  E    +++
Sbjct: 511 ATGALRSGKEIHAYVLR 527



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I  LS C+    L  G+  HA + +  +  + +V  +L+++Y KCG      A       
Sbjct: 503 IAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE 562

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N +L+G+  + L D A S F ++  +   P+  T+  +L  C     + +G +L
Sbjct: 563 KDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWEL 622

Query: 241 -HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
            H  T K   +        ++ +  + G + +A ++   + ++ +   W A++NG + H 
Sbjct: 623 FHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHR 682

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             E       ++ E  ++PN+  + V L
Sbjct: 683 HVELGELAAKVILE--LEPNDVAYHVLL 708


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 297/536 (55%), Gaps = 38/536 (7%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V PNHYT+S +L+ C   +A   G+Q+H+   K  +L++  V +AL+ MY KC  M  AE
Sbjct: 6   VYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAE 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VFE                       E P     L+ E+    +E +F+   ++CA+  
Sbjct: 66  KVFE-----------------------EMPT----LLLENLTALDEVSFSSVFSACANAG 98

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           N   G   H   +K G+    ++  ++ DMY   G   +  K     G +   V+WN  I
Sbjct: 99  NLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTG-ARDVVTWNIMI 157

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
             +  N   E+A  +F  M R  +  DE +YSS+L +C+ L +L     IH++I++S F 
Sbjct: 158 MAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV 217

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N+ V SSLI  Y KCGS  DA ++F +    +VV W ++I A  Q+G A   + LFE+M
Sbjct: 218 KNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQM 277

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           + EGI+P   TF++VLSACSH+G V++G   F SM+K +GI P   HY+C+VDLL RAG+
Sbjct: 278 LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGE 337

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L+ A  FI  +PIKP A +W  L +ACR HS+L M + ++ ++ +L+PD+   YV L N+
Sbjct: 338 LDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNI 397

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
               G+  +A+E R+ M+   + KEPGCSWI++ N  Y F   +KSH +  ++YE L++L
Sbjct: 398 LTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKL 457

Query: 694 MQQIEDIGHT----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
            + ++  G+           +  KE  + YHSE++A+ FGL+SLPA       + L
Sbjct: 458 KELVKKKGYVAETEFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNL 513



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 207/457 (45%), Gaps = 67/457 (14%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+       G + H+L+ K     + FV ++LV+MYAKC D+     V ++MP L 
Sbjct: 16  VLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPTLL 75

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   L                           +  ++S++ + C +   ++ GKQ+H 
Sbjct: 76  LENLTAL---------------------------DEVSFSSVFSACANAGNLEFGKQVHG 108

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   +   ++N+L  MY KCG+  D   +F     R+V++W  +I  +  + +YE 
Sbjct: 109 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 168

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
                 +MR  G  P+E +++  L SCA+L   + G + H Q+I+ G      V ++++ 
Sbjct: 169 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 228

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A  Q+ E  +  + V W A IA   ++      +E F QM+R     D  
Sbjct: 229 MYAKCGSLVDA-FQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYI 287

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ S+L ACS           H+     + E      +S+I+ +   G +   E      
Sbjct: 288 TFVSVLSACS-----------HT----GRVEEGFFYFNSMIKVH---GIYPGHEH----- 324

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSGLVQDG 541
                  +  ++   S+ G   +A    E M    I+P  S + A+LSAC +HS L+  G
Sbjct: 325 -------YACIVDLLSRAGELDRAKRFIELM---PIKPDASVWGALLSACRNHSNLIM-G 373

Query: 542 QKVFESMVKEYGILPEE-AHYSCMVDLLGRAGKLEIA 577
           ++V    +K + + P+   +Y  + ++L R G L  A
Sbjct: 374 KEV---ALKLFDLEPDNPGNYVLLCNILTRNGMLNEA 407



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 111 LESL--LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           LE+L  LD+     V S C+    LE G++ H +  K  V    ++  SL +MY KCG  
Sbjct: 76  LENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLF 135

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
             +  +       D+ + N ++  Y  N  ++ A + F  +      P+  +YS++L  C
Sbjct: 136 NDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSC 195

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            +L+A+ +G  +H Q ++  ++    V+++L+TMY KCG + DA  +FE    RNV+ WT
Sbjct: 196 ANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWT 255

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK- 347
           AII   +QHG     + L   M  +GI P+  TF   L++C+       G+ +   +IK 
Sbjct: 256 AIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV 315

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            G+  G      IVD+ S  GE+  AK+ ++ M     +  W A ++ 
Sbjct: 316 HGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 363



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 14/147 (9%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M R+    + +T+S++L AC+   +    EQ+HS + K  F + V V S+L++ Y KC  
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 472 WEDAERVFSQ--------LTAADVVSWNSMIKAYSQNGR---ARKAIILFEKMVVEGIRP 520
              AE+VF +        LTA D VS++S+  A +  G     ++   +  K+ V  +  
Sbjct: 61  MLMAEKVFEEMPTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 120

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFES 547
            N++   +   C   GL  D  K+F +
Sbjct: 121 INNSLSDMYGKC---GLFNDVAKLFSN 144



 Score = 42.7 bits (99), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 13/136 (9%)

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-- 574
           G+ P + TF AVLSAC+ +     G+++  S+V ++G L E    S +VD+  +   +  
Sbjct: 5   GVYPNHYTFSAVLSACTDTTASVHGEQM-HSLVWKHGFLAEVFVVSALVDMYAKCCDMLM 63

Query: 575 ------EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
                 E+  + + NL        +  +F+AC    +L+  + +    L+L   +  VY+
Sbjct: 64  AEKVFEEMPTLLLENLTALDEVS-FSSVFSACANAGNLEFGKQVHGVALKLGVWN-LVYI 121

Query: 629 --TLSNMYAEAGLQAD 642
             +LS+MY + GL  D
Sbjct: 122 NNSLSDMYGKCGLFND 137


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/628 (32%), Positives = 329/628 (52%), Gaps = 16/628 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LDK      L+ CS+   L  G+  H LI    +     +T SL++MY+KCG +     +
Sbjct: 65  LDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARIL 124

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS-LSA 233
                 LD  S N L+AGY +N  +++  +   K+    +  N YT  + L  C S  + 
Sbjct: 125 FDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNG 184

Query: 234 IDE-GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               G  LH   +KL       V  ALL MY K G ++DA  +F+ +V +NV+ + A++ 
Sbjct: 185 CKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMA 244

Query: 293 GFKQHGDYE-----KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           G  Q    E     K L L   M+  GI P+ +T++  L +C  + +       HA + K
Sbjct: 245 GLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCK 304

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+   +++G+ ++D+YS LG + +A      +  + + V   A I G+ +N + E A+ 
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDALLCFNSI-HNLTIVPMTAMIFGYLQNGEFESALS 363

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +++  +   DEF +S+I+ +C+ +  L + EQI     K          +S I  Y 
Sbjct: 364 LFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYA 423

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           K G    A   F Q+   D+VSW++MI + +Q+G A +A+  FE M   GI P +  FL 
Sbjct: 424 KSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLG 483

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL ACSH GLV++G + F++M K+Y +     H  C+VDLLGRAG+L  A   I  L  +
Sbjct: 484 VLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFE 543

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +WR L +ACR H D   A+ ++++++EL+P  +A YV L N+Y +AG +  A + R
Sbjct: 544 HEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVR 603

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG------ 701
            LM+ + I KEPG SWI++ +K+Y F S ++SH    ++Y KL +++   + +       
Sbjct: 604 TLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDIL 663

Query: 702 --HTDNEKEDRVLYHSERLAVGFGLISL 727
               ++E    V YHSE+LAV FG++ L
Sbjct: 664 GYKIEHEHLTNVNYHSEKLAVAFGVLYL 691



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 205/388 (52%), Gaps = 8/388 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KCGD +S   +  +M   +I + N L++GY + +  D+    F K   + ++ + Y  + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L  C     +  GK +H   +     S+  ++N+L+ MY KCG ++ A  +F+   + +
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS--HMGYMF 341
            +SW ++I G+ Q+G YE+ L ++  M ++G+  N YT   AL +C+S  N     G M 
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   IK G+ L   VGTA++DMY+  G + +A +   +M    + V +NA +AG  + + 
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM-VDKNVVMYNAMMAGLLQQET 251

Query: 402 TEE-----AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            E+     A+  F +M         FTYSS+LKAC ++      +Q+H+ + K+   S+ 
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           ++GS LI+ Y+  GS  DA   F+ +    +V   +MI  Y QNG    A+ LF +++  
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTY 371

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKV 544
             +P    F  ++S+C++ G+++ G+++
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGEQI 399


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 194/574 (33%), Positives = 310/574 (54%), Gaps = 5/574 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           L  C     ++ G   H  + K    G D +V +SL+ MY KCG +   + +  ++   D
Sbjct: 48  LKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPD 107

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I + + +++G+ KN    QA  FF ++    DV P+  T  T+++ C  LS    G+ +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              M+  + +  ++ N+LL  Y K    ++A ++F+ + +++VISW+ +I  + Q+G   
Sbjct: 168 GFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAA 227

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + LR+   M +DG +PN  T    L +CA+  +   G   H   I++G+     V TA+V
Sbjct: 228 EALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALV 287

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACD 420
           DMY       EA      + K    VSW A I+GF  N     +IE FS M+  N+   D
Sbjct: 288 DMYMKCFSPEEAYAVFSRIPKK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                 +L +CS L  L   E  HS ++K  F+SN  +G+SL+E Y++CGS  +A +VF+
Sbjct: 347 AILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 406

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQ 539
           ++   D V W S+I  Y  +G+  KA+  F  MV    ++P   TFL++LSACSH+GL+ 
Sbjct: 407 EIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIH 466

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G ++FE MV +Y + P   HY+ +VDLLGR G+L+ A+     +P  PT  I   L  A
Sbjct: 467 EGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGA 526

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H + +MAE ++KQ+ EL+ + A  Y+ +SNMY   G   + E+ R  +K + I K  
Sbjct: 527 CRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGL 586

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
             S IE+  K+++F + +  H E   VY  LK+L
Sbjct: 587 AESLIEIRRKVHKFVADDDLHPEKEPVYGLLKEL 620



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 166/324 (51%), Gaps = 7/324 (2%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R +  W  ++    +   +E+ +     M  D   P+ +T  VAL +C  LR    G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 339 YMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            M H   +K+ + LG   +VG++++ MY   G + EA +   E+ K    V+W++ ++GF
Sbjct: 61  EMIHG-FLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEK-PDIVTWSSMVSGF 118

Query: 397 FRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            +N    +A+E F +M   +D   D  T  +++ AC+ L +      +H  +++  F ++
Sbjct: 119 EKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSND 178

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + + +SL+  Y K  ++++A  +F  +   DV+SW+++I  Y QNG A +A+ +F +M+ 
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +G  P  +T L VL AC+ +  ++ G+K  E  +++ G+  E    + +VD+  +    E
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPE 297

Query: 576 IALIFISNLPIKPTAPIWRPLFAA 599
            A    S +P K     W  L + 
Sbjct: 298 EAYAVFSRIPKKDVVS-WVALISG 320


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 208/649 (32%), Positives = 357/649 (55%), Gaps = 38/649 (5%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYH--ALITKTAVCGDQFVTASLVNMYAKCGDIK 169
            S L  Q    +   C++++CL+ G   H   L     +  D F+T  ++NMY KCG + 
Sbjct: 85  HSSLSLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLA 144

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               V  QM + +I S   L++G+A++ L  + FS F  L     +PN + ++++L+ C 
Sbjct: 145 YARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGLLA-HFRPNEFAFASLLSACE 203

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK--------CGMMEDAESVFEGLVQ 281
               I  G Q+HA  +K+   +   V+N+L+TMY K            +DA ++F+ +  
Sbjct: 204 E-HDIKCGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEF 262

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS---CASLR--NSH 336
           RN++SW ++I  F+  G  +K + L   M  +GI  +  T     +S   C +    N++
Sbjct: 263 RNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTY 322

Query: 337 MG--YMFHAQVIKRGMALGDFVGTAIVDMYSGLG-EIWEAKKQLKEMGKSASSVSWNAQI 393
           +   +  H   IK G+     V TA++  Y+ LG  I +  +   +       VSW A I
Sbjct: 323 LRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALI 382

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +  F  +  E+A   F Q+ R     D +T+S  LKAC+   +      IHS+++K  F+
Sbjct: 383 S-VFAERDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQ 441

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            +  + ++L+ AY +CGS   +E+VF+++   D+VSWNSM+K+Y+ +G+A+ A+ LF++M
Sbjct: 442 EDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM 501

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
               + P ++TF+A+LSACSH GLV +G K+F SM  ++G++P+  HYSCMVDL GRAGK
Sbjct: 502 ---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGK 558

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           +  A   I  +P+KP + IW  L  +CR H + ++A+  + +  EL+P+++  YV +SN+
Sbjct: 559 IFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNI 618

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           Y+  G    A   R  M   ++ KEPG SW+E+  +++ F S  + H     +  +L+ +
Sbjct: 619 YSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIV 678

Query: 694 MQQIEDIGHT--------DNE---KEDRVLYHSERLAVGFGLI---SLP 728
           + Q++++G+         D E   KED++ +HSE++A+ F ++   SLP
Sbjct: 679 IGQLKEMGYVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGSLP 727



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 3/171 (1%)

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y  L +I     + +++  SA   +    I    R   T+  IE    ++   ++    T
Sbjct: 33  YGILRQIGLTISRARKVNSSAEPETIATNIDAQIRALSTQGNIEEALSLLYTHSSLSLQT 92

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKS--KFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           Y+S+  AC+    L     +H  ++      +++V + + +I  Y KCG    A  VF Q
Sbjct: 93  YASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQ 152

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           ++  ++VSW ++I  ++Q+G  R+   LF  ++    RP    F ++LSAC
Sbjct: 153 MSHRNIVSWTALISGHAQSGLVRECFSLFSGLLAH-FRPNEFAFASLLSAC 202


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 324/569 (56%), Gaps = 18/569 (3%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA--IDEGKQLHAQTMKL 247
           +A ++ N    +A  FF ++     +P+  T+S +LA    + A  ID+G+++H      
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
             L    V  A+++MY KCG ++DA + FE L  +N ++W A++  +K  G   + L L 
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 308 CLM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDM 363
             M  R     P++++F++A+ +C++L +   G   H  + + G  L     VGTA+++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEF 422
           YS  G++ EA+K    +   A SV WNA IA + ++ + ++A++ +  M    D A  + 
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ +++  C+ L +L     IH+R+  + F++N+ V ++L+  Y KCG  ++A  VF  +
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D +SWN++I +Y+ +G + +A++L+++M ++G++PT  TF+ +LSACSH GLV DG 
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M  ++ I P   H+ C++DLLGR G+L  A + + ++PI+  A  W  L  AC+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H DLK     + Q+++  P  +  YV LSN+YA AG   D E+ RK+M  + + K PG S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE-----------DRV 711
           WIE+ + ++ F S ++SH +  ++Y +L +++++++ +G+  +              D +
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + HSE+LA+ +G + +P K+     + L 
Sbjct: 541 VCHSEKLAIVYGNMVVPGKSMLRIVKNLR 569



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 146/293 (49%), Gaps = 7/293 (2%)

Query: 127 CSREECLELGRRYHALITKTA--VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
           CS  E LE GR  H ++ +    +  D  V  +L+NMY+KCGD++    V   + +   +
Sbjct: 144 CSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADS 203

Query: 185 SC-NCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            C N ++A YA++    QA   +  + D  D+ P   T+ T++ +C  LSA+ +G+ +HA
Sbjct: 204 VCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHA 263

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           +     + +   VSNAL+ MY KCG +++A  VF  +  ++ ISW  II+ +  HG  ++
Sbjct: 264 RVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQ 323

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCA--SLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            L L   M   G+ P E TF   L++C+   L    + Y +  Q   R        G  I
Sbjct: 324 ALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFG-CI 382

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           +D+    G + EA+  LK M   A++V W + +     +   +  + A  Q+V
Sbjct: 383 IDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVV 435



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/424 (22%), Positives = 193/424 (45%), Gaps = 10/424 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           ++ GR  H     + +  +  V  ++++MY KCG +    A  +++ + +  + N ++  
Sbjct: 47  IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 106

Query: 193 YAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK--LQ 248
           Y  +    +A   F ++       +P+ +++S  +  C +L  +++G+++H    +   +
Sbjct: 107 YKLDGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKE 166

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGDYEKPLRLV 307
                 V  ALL MY KCG +E+A  VF+ +    + + W A+I  + QHG  ++ L L 
Sbjct: 167 LHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLY 226

Query: 308 CLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
             M +   + P + TF   +  CA L     G   HA+V          V  A+V MY  
Sbjct: 227 RSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGK 286

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G + EA      M K    +SWN  I+ +  +  +++A+  + +M        E T+  
Sbjct: 287 CGCLDEALDVFHSM-KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVG 345

Query: 427 ILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TA 484
           +L ACS    +A       R+    + + +V     +I+   + G   +AE V   +   
Sbjct: 346 LLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQ 405

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A+ V W S++ A   +G  ++ +   ++ VV+ +  T+  ++ + +  + +G  +D +K+
Sbjct: 406 ANAVQWMSLLGACKTHGDLKRGVRAADQ-VVDRVPWTSGGYVLLSNIYAAAGRWKDVEKI 464

Query: 545 FESM 548
            + M
Sbjct: 465 RKIM 468



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + V+  C+    L+ GR  HA +  T    +  V+ +LV+MY KCG +   + V   M  
Sbjct: 243 VTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKL 302

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +++ YA +   DQA   + ++D   V+P   T+  +L+ C     + +G   
Sbjct: 303 KDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD- 361

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
           +   M+  +  K +V +   ++ +  + G + +AE V + + +Q N + W +++   K H
Sbjct: 362 YFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTH 421

Query: 298 GDYEKPLR 305
           GD ++ +R
Sbjct: 422 GDLKRGVR 429


>gi|42563517|ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g05340
 gi|332640702|gb|AEE74223.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/596 (32%), Positives = 321/596 (53%), Gaps = 13/596 (2%)

Query: 123 VLSYCSREECL-ELGRRYHALITKTA-----VCGD-----QFVTASLVNMYAKCGDIKSM 171
           +LS C RE     LG   HA I K       V  D       V  SL+++YAKCG +   
Sbjct: 50  LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + +  +MP  D+ S N +  G+ +N   +  F    ++ G     +H T + +L++C + 
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG-SGGFDHATLTIVLSVCDTP 168

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                 K +HA  +   Y  + +V N L+T Y KCG       VF+G+  RNVI+ TA+I
Sbjct: 169 EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVI 228

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G  ++  +E  LRL  LMR   + PN  T+  ALA+C+  +    G   HA + K G+ 
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               + +A++DMYS  G I +A   + E       VS    + G  +N   EEAI+ F +
Sbjct: 289 SELCIESALMDMYSKCGSIEDAW-TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIR 347

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M++     D    S++L    +  SL   +Q+HS ++K KF  N  V + LI  Y+KCG 
Sbjct: 348 MLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD 407

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             D++ VF ++   + VSWNSMI A++++G    A+ L+E+M    ++PT+ TFL++L A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH GL+  G+++   M + +GI P   HY+C++D+LGRAG L+ A  FI +LP+KP   
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IW+ L  AC  H D ++ E+ ++Q+ +  PD ++ ++ ++N+Y+  G   +  +  K MK
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMK 587

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
              ++KE G S IE+ +K + F  ++K H +   +Y+ L  L   + D G+  +++
Sbjct: 588 AMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKR 643



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)

Query: 82  NGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFV-------IEVLSYCSREECLE 134
           +G S RN       I     N +      L SL+ +  V       +  L+ CS  + + 
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            G++ HAL+ K  +  +  + ++L++MY+KCG I+    + +    +D  S   +L G A
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N   ++A  FF+++    V+ +    S +L +    +++  GKQLH+  +K ++   T 
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V+N L+ MY KCG + D+++VF  + +RN +SW ++I  F +HG     L+L   M    
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDMYSGLG 368
           + P + TF   L +C     SH+G +   + +   M     +       T I+DM    G
Sbjct: 454 VKPTDVTFLSLLHAC-----SHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            + EAK  +  +        W A +     +  TE    A  Q+ + 
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQT 555


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/561 (32%), Positives = 323/561 (57%), Gaps = 22/561 (3%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT----------YSTMLAICGSLSAIDEGK 238
           +L   +  +   +  S F   +  ++ P  Y+          +  +L +C    A+ E K
Sbjct: 24  ILPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAK 83

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
             H +TM+++      +SN L+  Y KCG +E A  VF+G+++R+++SW  +I  + ++ 
Sbjct: 84  ACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNR 143

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   MR +G   +E+T +  L++C +  ++      H   +K  + L  +VGT
Sbjct: 144 MESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGT 203

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+Y+  G I +A +  + M +  SSV+W++ +AG+ +++  EEA+  + +  R    
Sbjct: 204 ALLDLYAKCGMINDAVQVFESM-QDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLE 262

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            ++FT SS++ ACS L +L   +Q+H+ I KS F SNV V SS ++ Y KCGS  ++  +
Sbjct: 263 QNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYII 322

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           FS++   ++  WN++I  ++++ R ++ +ILFEKM  +G+ P   TF ++LS C H+GLV
Sbjct: 323 FSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 382

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G++ F+ M   YG+ P   HYSCMVD+LGRAG L  A   I ++P +PTA IW  L A
Sbjct: 383 EEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLA 442

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR   +L++AE  +K++ EL+P++A  +V LSN+YA      +  + RKL++  ++ K 
Sbjct: 443 SCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKV 502

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EK 707
            G SWI++ +K++ F     SH  + ++   L  L+ ++   G+  +           +K
Sbjct: 503 RGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKK 562

Query: 708 EDRVLYHSERLAVGFGLISLP 728
           E+ ++ HSE+LA+ FGL+ LP
Sbjct: 563 EELLMQHSEKLALVFGLMCLP 583



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 160/311 (51%), Gaps = 1/311 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           IE+L  C+R   +   +  H    +  + GD  ++  L+N Y+KCG ++    V   M  
Sbjct: 67  IEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLE 126

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + S N ++  Y +N +  +A   F ++     + + +T S++L+ CG+     E K+L
Sbjct: 127 RSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKL 186

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  +MK        V  ALL +Y KCGM+ DA  VFE +  ++ ++W++++ G+ Q  +Y
Sbjct: 187 HCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNY 246

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+ L L    +   ++ N++T +  + +C++L     G   HA + K G     FV ++ 
Sbjct: 247 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSA 306

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY+  G + E+     E+ +    + WN  I+GF ++ + +E +  F +M ++    +
Sbjct: 307 VDMYAKCGSLRESYIIFSEVQEKNIEL-WNTIISGFAKHARPKEVMILFEKMQQDGMHPN 365

Query: 421 EFTYSSILKAC 431
           E T+SS+L  C
Sbjct: 366 EVTFSSLLSVC 376



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 89/163 (54%), Gaps = 4/163 (2%)

Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           SL   QF +  V+  CS    L  G++ HA+I K+    + FV +S V+MYAKCG ++  
Sbjct: 260 SLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRES 319

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             +  ++   +I   N +++G+AK+A   +    F K+    + PN  T+S++L++CG  
Sbjct: 320 YIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 379

Query: 232 SAIDEGKQLHAQTMKLQY-LSKTAVS-NALLTMYIKCGMMEDA 272
             ++EG++   + M+  Y LS   V  + ++ +  + G++ +A
Sbjct: 380 GLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 421


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 180/538 (33%), Positives = 302/538 (56%), Gaps = 13/538 (2%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           + P +  Y+++L  C +  AI  GKQLHAQ     +   T ++  L+ +Y  C  +  A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ + + N+  W  +I G+  +G YE  ++L   M + G+ P+ +TF   L +CA+L 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
               G   H  V++ G     FVG A++DMY+  G +  A++   ++     +V WN+ +
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI-LVRDAVLWNSML 249

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           A + +N   +  +   S+MV       E T  + + A +   +L    ++H    + +FE
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFE 309

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S+  V ++L++ Y KCGS   A  +F +L    VVSWN+MI  Y+ +G A +A+ LFE+M
Sbjct: 310 SHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM 369

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
                +P + TF+ VLSACSH GL+++G   FE+M+++Y I P   HY+CMVDLLG +G+
Sbjct: 370 N-RVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGR 428

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L+ A   I  + + P + +W  L  +C+ H+++++ E   ++++EL+PDDA  YV LSN+
Sbjct: 429 LDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNI 488

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           YA+AG      + RKLM  + + K   CSWIEV NK++ F S + SH    ++Y +L+++
Sbjct: 489 YAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERV 548

Query: 694 MQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              +++ G++           D+EK + V  HSERLA+ FGLIS P   +   ++ L 
Sbjct: 549 GGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLR 606



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++  +S  +    L  GR  H L  +        V  +LV+MYAKCG ++    + +++ 
Sbjct: 280 LVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLG 339

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++ GYA +    +A   F +++ +  +P+H T+  +L+ C     ++EG  
Sbjct: 340 VKRVVSWNAMITGYAMHGHATEALDLFEEMNRV-AKPDHITFVGVLSACSHGGLLEEG-W 397

Query: 240 LHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS----WTAIING 293
           +  +TM   Y     V +   ++ +    G +++A ++   ++Q  V+     W A++N 
Sbjct: 398 MFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL---IMQMKVLPDSGVWGALLNS 454

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            K H + E  L  + L R   ++P++    V L++
Sbjct: 455 CKIHANVE--LGEIALERLIELEPDDAGNYVILSN 487


>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
 gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 313/580 (53%), Gaps = 7/580 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C+    L  GR  HA+  ++     D FV  ++V MYA+CGD+   +     +   
Sbjct: 103 LLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKP 162

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           DI     ++ GY +N + ++A  FF + + G  V     T  + ++    L  + +G+  
Sbjct: 163 DIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQAC 222

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++       A+ N +L+ Y+K G  + +  +FEG+  R+VI+W+ +I G+ QHGD 
Sbjct: 223 HAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDA 282

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + LR+   M +  + PN  T    L +CA + ++  G   H   +  G  L   V TA+
Sbjct: 283 HEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATAL 342

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY       EA      M K    V+W A I G  +N+   E++  F  M+ +D   D
Sbjct: 343 VDMYMKCSCHEEAMCLFHRMPKK-DVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPD 401

Query: 421 EFTYSSILKACSLLPS--LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             T   +L ACS      LA C  +H  +V++ F +N  V ++L++ Y+KCG  + A RV
Sbjct: 402 AITMVKVLAACSEFGGTRLAIC--LHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRV 459

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F   T  D+V W SMI  Y  +G  ++A+ L+++M+   I+P + TF++VLSACSHSGLV
Sbjct: 460 FEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLV 519

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           Q+G ++F+SM + +G++P   H S MVDLLGRAG+L+ A+ FI  +  +  A  W  L A
Sbjct: 520 QEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLA 579

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR H++ KM++  +K +L+LDPD    Y  L+N+YA        ++ R +++ +++ K 
Sbjct: 580 ACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKV 639

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           PG S +EV N ++ F +  ++H +   +   L  L +++ 
Sbjct: 640 PGYSSVEVGNLVHTFIAGERTHQDWDNICTLLCDLSRKLR 679



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 169/327 (51%), Gaps = 3/327 (0%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMME 270
           + V+ + +T+S +L  C +L ++  G+ +HA  ++    S+ A V+ A++ MY +CG M 
Sbjct: 91  LRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMV 150

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL-MREDGIDPNEYTFTVALASC 329
            A + +  L + +++  T+++ G++Q+G  E+ L      +   G+     T   A+++ 
Sbjct: 151 GAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAA 210

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A L +   G   HA V++  +     +   ++  Y  +G+ ++A  +L E       ++W
Sbjct: 211 AQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGD-FQASMRLFEGMTDRDVITW 269

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           +  I G+ ++    E +  + +MV+     +  T  S+L+AC+L+      +++H   V 
Sbjct: 270 SCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVS 329

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              E  V V ++L++ Y KC   E+A  +F ++   DVV+W ++I   +QN    +++ +
Sbjct: 330 IGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHV 389

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSG 536
           F+ M+++   P   T + VL+ACS  G
Sbjct: 390 FKCMLLDDHVPDAITMVKVLAACSEFG 416



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERV 478
           D FT+S +L+AC+ LPSLA    +H+  ++S   S +  V +++++ Y +CG    A   
Sbjct: 96  DGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINA 155

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV-EGIRPTNSTFLAVLSACSHSGL 537
           +  L   D+V   S++  Y QNG A +A+  F + VV +G+  T  T ++ +SA +  G 
Sbjct: 156 YGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGH 215

Query: 538 VQDGQKVFESMVK 550
           V+ GQ     +V+
Sbjct: 216 VRKGQACHAYVVR 228


>gi|6729044|gb|AAF27040.1|AC009177_30 hypothetical protein [Arabidopsis thaliana]
          Length = 770

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 196/596 (32%), Positives = 321/596 (53%), Gaps = 13/596 (2%)

Query: 123 VLSYCSREECL-ELGRRYHALITKTA-----VCGD-----QFVTASLVNMYAKCGDIKSM 171
           +LS C RE     LG   HA I K       V  D       V  SL+++YAKCG +   
Sbjct: 50  LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + +  +MP  D+ S N +  G+ +N   +  F    ++ G     +H T + +L++C + 
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG-SGGFDHATLTIVLSVCDTP 168

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                 K +HA  +   Y  + +V N L+T Y KCG       VF+G+  RNVI+ TA+I
Sbjct: 169 EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVI 228

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G  ++  +E  LRL  LMR   + PN  T+  ALA+C+  +    G   HA + K G+ 
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               + +A++DMYS  G I +A   + E       VS    + G  +N   EEAI+ F +
Sbjct: 289 SELCIESALMDMYSKCGSIEDAW-TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIR 347

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M++     D    S++L    +  SL   +Q+HS ++K KF  N  V + LI  Y+KCG 
Sbjct: 348 MLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD 407

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             D++ VF ++   + VSWNSMI A++++G    A+ L+E+M    ++PT+ TFL++L A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH GL+  G+++   M + +GI P   HY+C++D+LGRAG L+ A  FI +LP+KP   
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           IW+ L  AC  H D ++ E+ ++Q+ +  PD ++ ++ ++N+Y+  G   +  +  K MK
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMK 587

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
              ++KE G S IE+ +K + F  ++K H +   +Y+ L  L   + D G+  +++
Sbjct: 588 AMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKR 643



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)

Query: 82  NGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFV-------IEVLSYCSREECLE 134
           +G S RN       I     N +      L SL+ +  V       +  L+ CS  + + 
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            G++ HAL+ K  +  +  + ++L++MY+KCG I+    + +    +D  S   +L G A
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N   ++A  FF+++    V+ +    S +L +    +++  GKQLH+  +K ++   T 
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V+N L+ MY KCG + D+++VF  + +RN +SW ++I  F +HG     L+L   M    
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDMYSGLG 368
           + P + TF   L +C     SH+G +   + +   M     +       T I+DM    G
Sbjct: 454 VKPTDVTFLSLLHAC-----SHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            + EAK  +  +        W A +     +  TE    A  Q+ + 
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQT 555


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 200/648 (30%), Positives = 345/648 (53%), Gaps = 41/648 (6%)

Query: 129 REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           + + L LG++ H    +       F   +L+ MYAK G +    +++      D+ + N 
Sbjct: 128 KRDGLWLGKQIHGCCFRKGHW-RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNS 186

Query: 189 LLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           +++ +++N  F +A  F   + L+G  V+P+  T++++L  C  L  +  GK++HA  ++
Sbjct: 187 MISSFSQNERFMEALMFLRLMVLEG--VKPDGVTFASVLPACSHLDLLRTGKEIHAYALR 244

Query: 247 LQ-YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
               +  + V +AL+ MY  CG +E    VF+ ++ R +  W A+I G+ Q    EK L 
Sbjct: 245 TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALM 304

Query: 306 LVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
           L   M    G+  N  T +  + +             H  VIKRG+    ++  A++DMY
Sbjct: 305 LFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMY 364

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR---------- 414
           S +G+I  +K+    M +    VSWN  I  +    ++ +A+    +M R          
Sbjct: 365 SRMGDIKTSKRIFDSM-EDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGD 423

Query: 415 -NDAACDEF-----TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
            ND     F     T  ++L  C+ L +LA  ++IH+  +++   S V VGS+L++ Y K
Sbjct: 424 YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAK 483

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-----IRPTNS 523
           CG    A RVF Q+   +V++WN +I AY  +G+ ++++ LFE MV EG     ++PT  
Sbjct: 484 CGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEV 543

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+A+ ++CSHSG+V +G  +F  M  E+GI P   HY+C+VDL+GRAGK+E A   ++ 
Sbjct: 544 TFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNT 603

Query: 584 LPIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
           +P        W  L  ACR + ++++ E  ++ +L+L PD A+ YV LSN+Y+ AGL   
Sbjct: 604 MPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDK 663

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           A   R+ MK   + KEPGCSWIE  +++++F + + SH +  K+++ L+ L ++++  G+
Sbjct: 664 AMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGY 723

Query: 703 T-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                       + EKE  +  HSE+LA+ FG+++ P       ++ L
Sbjct: 724 VPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNL 771



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 246/521 (47%), Gaps = 44/521 (8%)

Query: 133 LELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           L LG++ HA + K        VT   +LVNMY KCG +     V  ++   D  S N ++
Sbjct: 26  LYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSII 85

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE---GKQLHAQTMKL 247
           +   +   ++ A   F  +     +P+ +T  +M   C +L   D    GKQ+H    + 
Sbjct: 86  SALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRK 145

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
            +  +T  +NAL+ MY K G ++DA+S+      R++++W ++I+ F Q+  + + L  +
Sbjct: 146 GHW-RTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFL 204

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSG 366
            LM  +G+ P+  TF   L +C+ L     G   HA  ++    +   FVG+A+VDMY  
Sbjct: 205 RLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCN 264

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G++   +     +      + WNA IAG+ +++  E+A+  F +M   +AA     YS+
Sbjct: 265 CGQVESGRLVFDSVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEM---EAAAG--LYSN 318

Query: 427 ILKACSLLPSLATC------EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                S++P+   C      E IH  ++K   E+N ++ ++LI+ Y++ G  + ++R+F 
Sbjct: 319 ATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFD 378

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILF-------EKMVVEG---------IRPTNST 524
            +   D+VSWN++I +Y   GR+  A++L        EK   +G          +P + T
Sbjct: 379 SMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSIT 438

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
            + VL  C+    +  G+++    ++   +  +    S +VD+  + G L +A      +
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTVGSALVDMYAKCGCLNLARRVFDQM 497

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           PI+     W  +  A   H          K+ LEL  D  A
Sbjct: 498 PIR-NVITWNVIIMAYGMHGK-------GKESLELFEDMVA 530



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 185/374 (49%), Gaps = 10/374 (2%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--LSKTAVSNALLTMYIKCGM 268
           G    P+++ +  +L     +  +  GKQ+HA   K  Y   S   + N L+ MY KCG 
Sbjct: 3   GSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGG 62

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + DA  VF+ + +R+ +SW +II+   +  ++E  ++   LM  +G +P+ +T      +
Sbjct: 63  LGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALA 122

Query: 329 CASLRNSH---MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           C++LR      +G   H    ++G     F   A++ MY+ LG + +AK  L  + +   
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLV-LFEDRD 180

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+WN+ I+ F +N++  EA+     MV      D  T++S+L ACS L  L T ++IH+
Sbjct: 181 LVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHA 240

Query: 446 RIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +++     N  VGS+L++ Y  CG  E    VF  +    +  WN+MI  Y+Q+    
Sbjct: 241 YALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDE 300

Query: 505 KAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           KA++LF +M    G+    +T  +++ A      +   + +   ++K  G+       + 
Sbjct: 301 KALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNRYLQNA 359

Query: 564 MVDLLGRAGKLEIA 577
           ++D+  R G ++ +
Sbjct: 360 LIDMYSRMGDIKTS 373



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 238/570 (41%), Gaps = 83/570 (14%)

Query: 123 VLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  CS  + L  G+  HA   +T  V  + FV ++LV+MY  CG ++S   V   +   
Sbjct: 222 VLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDR 281

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            I   N ++AGYA++   ++A   F++++    +  N  T S+++        I   + +
Sbjct: 282 KIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGI 341

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K    +   + NAL+ MY + G ++ ++ +F+ +  R+++SW  II  +   G  
Sbjct: 342 HGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRS 401

Query: 301 EKPLRLVCLMRE-------DG---------IDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
              L L+  M+        DG           PN  T    L  CASL     G   HA 
Sbjct: 402 SDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAY 461

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            I+  +A    VG+A+VDMY+  G +  A++   +M    + ++WN  I  +  + K +E
Sbjct: 462 AIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQM-PIRNVITWNVIIMAYGMHGKGKE 520

Query: 405 AIEAFSQMVRNDAACD-----EFTYSSILKAC----------SLLPSLATCEQI------ 443
           ++E F  MV   A        E T+ ++  +C          SL   +     I      
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDH 580

Query: 444 HSRIVK-----SKFESNVHVGSSLIEAYNKCGSWED---AERVFSQLTAADVVSWN---- 491
           ++ IV       K E    + +++   ++K G+W     A R++  +   ++ + N    
Sbjct: 581 YACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQL 640

Query: 492 ---------SMIKAYSQNGRARKAIILFEKMVVEGIR--PTNS---------TFLAVLSA 531
                     +   YS  G   KA+ L  +M   G++  P  S          FLA   +
Sbjct: 641 QPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLS 700

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD-------LLGRAGKLEIALIFISNL 584
              S  + D  +     +K+ G +P+ A     +D       L G + KL IA   I N 
Sbjct: 701 HPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAF-GILNT 759

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           P   T  + + L     CH+    ++FISK
Sbjct: 760 PPGTTIRVAKNLRVCNDCHT---ASKFISK 786



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES--NVHVGSSLIEAYNKC 469
           M+ +  + D F + ++LKA + +  L   +QIH+ + K  + S  +V + ++L+  Y KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G   DA +VF ++T  D VSWNS+I A  +      AI  F  M++EG  P++ T +++ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 530 SACSH 534
            ACS+
Sbjct: 121 LACSN 125



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    L  G+  HA   +  +     V ++LV+MYAKCG +     V  QMP
Sbjct: 439 LMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMP 498

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICGSLSAI 234
             ++ + N ++  Y  +    ++   F  +      G +V+P   T+  + A C     +
Sbjct: 499 IRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMV 558

Query: 235 DEGKQL 240
           DEG  L
Sbjct: 559 DEGLSL 564


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 219/732 (29%), Positives = 362/732 (49%), Gaps = 98/732 (13%)

Query: 19  PYPVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEE-- 76
           P+ V EQ+  K  +H        P        L++K+     +  + L+F      +   
Sbjct: 127 PFQVTEQIHAKIIHHGFG---SSPLVCNPLIDLYSKN---GHVDLAKLVFERLFLKDSVS 180

Query: 77  -----KGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREE 131
                 G+S+NG   R D     F     S  +P T Y   S         VLS C++ E
Sbjct: 181 WVAMISGLSQNG---REDEAILLFCQMHKSAVIP-TPYVFSS---------VLSACTKIE 227

Query: 132 CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
             +LG + H  I K  +  + FV  +LV +Y++ G++ +   +  +M   D  S N L++
Sbjct: 228 LFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLIS 287

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G A+    D+A   F K+    ++P+  T +++L+ C S+ A  +GKQLH+  +K+   S
Sbjct: 288 GLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSS 347

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              +  +LL +Y+KC  +E A   F      NV+ W  ++  + Q G+  +   +   M+
Sbjct: 348 DLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQ 407

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
            +G+ PN+YT+   L +C SL    +G   H QVIK G     +V + ++DMY+  GE+ 
Sbjct: 408 IEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELD 467

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+  L+ + +    VSW A IAG+ ++    EA++ F +M       D   +SS + AC
Sbjct: 468 TARGILQRL-REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISAC 526

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSL-----IEAYNKCGSWEDAERVFSQLTAAD 486
           + + +L   +QIH++   S +  ++ +G++L     I  Y+KCGS EDA+R F ++   +
Sbjct: 527 AGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKN 586

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           VVSWN+MI  YSQ+G   +A+ LFE+M                                 
Sbjct: 587 VVSWNAMITGYSQHGYGSEAVSLFEEM--------------------------------- 613

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
              K+ G++P                     + F+  +PI+P A IWR L +AC  H ++
Sbjct: 614 ---KQLGLMPNH-------------------VTFVGEMPIEPDAMIWRTLLSACTVHKNI 651

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++ EF ++ +LEL+P+D+A YV LSNMYA +G     +  R++MK + + KEPG SWIEV
Sbjct: 652 EIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEV 711

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HS 715
            N I+ FF  ++ H    ++YE +  L ++  +IG+           + E++D   Y HS
Sbjct: 712 KNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHS 771

Query: 716 ERLAVGFGLISL 727
           E+LAV FGL+SL
Sbjct: 772 EKLAVAFGLLSL 783



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 239/478 (50%), Gaps = 4/478 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L   ++ HA I K+   G+  + + L+++Y   G++ + + +   +P  +++  
Sbjct: 20  CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTM 245
           N +++G     L  Q    F  +   +V P+  T++++L  C G  +     +Q+HA+ +
Sbjct: 80  NKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKII 139

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
              + S   V N L+ +Y K G ++ A+ VFE L  ++ +SW A+I+G  Q+G  ++ + 
Sbjct: 140 HHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAIL 199

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L C M +  + P  Y F+  L++C  +    +G   H  ++K G++   FV  A+V +YS
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G +  A++   +M +    +S+N+ I+G  +   ++ A++ F +M  +    D  T +
Sbjct: 260 RWGNLIAAEQIFSKMHRR-DRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S+L AC+ + +    +Q+HS ++K    S++ +  SL++ Y KC   E A   F      
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE 378

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +VV WN M+ AY Q G   ++  +F +M +EG+ P   T+ ++L  C+  G +  G+++ 
Sbjct: 379 NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIH 438

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
             ++K  G        S ++D+  + G+L+ A   +  L  +     W  + A    H
Sbjct: 439 TQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVS-WTAMIAGYTQH 494



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/524 (24%), Positives = 246/524 (46%), Gaps = 47/524 (8%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++ N  TY  +   C +  ++ + K+LHA+  K  +  +  + + L+ +Y+  G +++A 
Sbjct: 6   IRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAI 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ +   NV  W  +I+G        + L L  LM  + + P+E TF   L +C+  +
Sbjct: 66  KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125

Query: 334 NS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +    HA++I  G      V   ++D+YS  G +  AK   + +     SVSW A 
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-DSVSWVAM 184

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I+G  +N + +EAI  F QM ++      + +SS+L AC+ +      EQ+H  IVK   
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
            S   V ++L+  Y++ G+   AE++FS++   D +S+NS+I   +Q G + +A+ LFEK
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEK 304

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---------------------- 550
           M ++ ++P   T  ++LSAC+  G    G+++   ++K                      
Sbjct: 305 MQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFD 364

Query: 551 -----EYGILPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAA 599
                EY +  E  +   ++ M+   G+ G L  +      + I+   P    +  +   
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           C     L + E I  Q+++       VYV   L +MYA+ G   + +  R +  ++ + +
Sbjct: 425 CTSLGALDLGEQIHTQVIK-SGFQFNVYVCSVLIDMYAKHG---ELDTARGI--LQRLRE 478

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           E   SW  +       ++Q+   +E  K++++++    + ++IG
Sbjct: 479 EDVVSWTAMIAG----YTQHDLFAEALKLFQEMENQGIRSDNIG 518



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 159/325 (48%), Gaps = 6/325 (1%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M E GI  N  T+      C +  +       HA++ K G    D +G+ ++D+Y   GE
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A K   ++  S  S  WN  I+G    +   + +  FS M+  +   DE T++S+L+
Sbjct: 61  VDNAIKLFDDIPSSNVSF-WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 430 ACSLLPS-LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ACS   +     EQIH++I+   F S+  V + LI+ Y+K G  + A+ VF +L   D V
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSV 179

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SW +MI   SQNGR  +AI+LF +M    + PT   F +VLSAC+   L + G+++   +
Sbjct: 180 SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI 239

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA--ACRCHSDL 606
           VK +G+  E    + +V L  R G L  A    S +  +     +  L +  A R  SD 
Sbjct: 240 VK-WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS-YNSLISGLAQRGFSDR 297

Query: 607 KMAEFISKQILELDPDDAAVYVTLS 631
            +  F   Q+  + PD   V   LS
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLS 322


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 183/589 (31%), Positives = 320/589 (54%), Gaps = 47/589 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F   +++++YAK G ++ +  +   MP  D  S N +++G+A N     A   FL++ 
Sbjct: 88  DNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              ++P  YT+ ++L  C  L  +  GKQ+H + +         V NAL  +Y +CG ++
Sbjct: 148 KEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F+ +V RNV++W  +I+G+ ++   EK + L   M+   + P++ T         
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVT--------- 258

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                                      ++++  Y   G I EA+K   E+ +    V W 
Sbjct: 259 --------------------------ASSVLGAYIQAGYIDEARKVFGEI-REKDEVCWT 291

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I G  +N K E+A+  FS+M+  +A  D +T SS++ +C+ L SL   + +H +    
Sbjct: 292 IMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLM 351

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               ++ V S+L++ Y KCG   DA  +FS +   +VVSWNSMI  Y+ NG+  +A+ L+
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E M+ E ++P + TF+ VLSAC H+GLV++G++ F SM  ++G+ P   HY+CMV+L GR
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGR 471

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           +G ++ A+  IS++  +P + IW  + + C    D+K  E  ++ ++EL+P +A  Y+ L
Sbjct: 472 SGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIML 531

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SNMYA  G   D    R LMK K + K    SWIE+ N++++F + +++H +   ++ +L
Sbjct: 532 SNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQL 591

Query: 691 KQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
            +L++++++ G + N           EK + + YHSE+LA+ +GLI  P
Sbjct: 592 NRLIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKP 640



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 2/186 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+S C++   L  G+  H       V  D  V+++LV+MY KCG  +    + 
Sbjct: 321 DGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIF 380

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   ++ S N ++ GYA N    +A S +  +   +++P+  T+  +L+ C     ++
Sbjct: 381 STMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVE 440

Query: 236 EGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EGK+          L  T    A ++ ++ + G M+ A  +   + Q  N + WT +++ 
Sbjct: 441 EGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSV 500

Query: 294 FKQHGD 299
               GD
Sbjct: 501 CVMKGD 506



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 75/175 (42%), Gaps = 33/175 (18%)

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN-VHVGSSLIEA 465
           +A   +  N  A  E  Y+ +   C     +   +++ S +    F+ N   + + L+  
Sbjct: 9   QAIDTLYTNGPASHE-CYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNL 67

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ-------------------------- 499
           Y K G    A ++F ++T  D  SWN+M+  Y++                          
Sbjct: 68  YAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVI 127

Query: 500 -----NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
                NGR   A+ +F +M  EG++PT  T ++VL+AC+    ++ G+++   ++
Sbjct: 128 SGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRII 182


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 190/603 (31%), Positives = 321/603 (53%), Gaps = 12/603 (1%)

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREE------CLELGRRYHALITKTAVCGDQFVTASL 158
           P  C  L ++ ++       +  S         C  LG + H+L  K  +  + F   +L
Sbjct: 83  PAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATAL 142

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
           ++MYAKCG  +    +   MP  +  S N L+AGY ++     A   F++++     P+ 
Sbjct: 143 LHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDE 202

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
            T++ +L +    S      QLH + +K        V NA +T Y +CG + ++  +F+ 
Sbjct: 203 ATFAALLTVVND-STCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDE 261

Query: 279 LVQR-NVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSH 336
           +  R ++ISW A++  +  HG   + +R    +MR  G+ P+ Y+FT  +++CA  R+ H
Sbjct: 262 IGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD-H 320

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE--IWEAKKQLKEMGKSASSVSWNAQIA 394
            G + H  V K G      V  A++ MY+   E  + E   +  +      +VSWN+ + 
Sbjct: 321 GGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLT 380

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+ ++  + +A+  F  M   +   DE+ +S+ L++CS L  L    QIH  +++S F S
Sbjct: 381 GYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFAS 440

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N  V SSLI  Y+K G  +DA + F +   +  V WNSM+  Y+Q+G+A+    LF +M+
Sbjct: 441 NNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQML 500

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
              +   + TF+ +++ACSH+GLV +G ++  +M   YGI     HY+C +DL GRAG+L
Sbjct: 501 ELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQL 560

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + A   I ++P +P A +W  L  ACR H ++++A  ++  +LE +P   + YV LSNMY
Sbjct: 561 DKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMY 620

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           +  G+ +D    +K MK K +SK PG SWIEV N+++ F +++ SH  M ++YE L  L+
Sbjct: 621 SGLGMWSDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLSLLL 680

Query: 695 QQI 697
              
Sbjct: 681 HNF 683



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 235/525 (44%), Gaps = 17/525 (3%)

Query: 138 RYHALITKTAVCG----DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           + HA + K+ V      +Q +TA  V+       + +   +  ++P LD AS N LLA +
Sbjct: 21  KSHATLLKSGVTSPTPWNQLLTAYSVS----SPGLAAARRLFDEIPRLDAASWNSLLAAH 76

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
                   A      +    +  N +   + L    ++     G QLH+  +K       
Sbjct: 77  VSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNV 136

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
             + ALL MY KCG   DA  +F+G+ +RN +SW A++ G+ + G     ++L   M  +
Sbjct: 137 FSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMERE 196

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  P+E TF  AL +  +     + +  H +++K G ALG  V  A +  YS  G +  +
Sbjct: 197 GFLPDEATF-AALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANS 255

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACS 432
           ++   E+G  +  +SWNA +  +  +    EA+  F+ M+R      D ++++SI+ AC+
Sbjct: 256 RRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACA 315

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS---WEDAERVFSQLTAADVVS 489
                     IH  + K+ FE   HV ++LI  Y +       EDA + F  L   D VS
Sbjct: 316 EHRDHGGT-VIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVS 374

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNSM+  YSQ+G +  A+  F  M  E I      F A L +CS   L++ G+++   +V
Sbjct: 375 WNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQI-HGLV 433

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
              G        S ++ +  ++G L+ A+          + P W  +      H   +  
Sbjct: 434 IRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVP-WNSMMFGYAQHGKAQAV 492

Query: 610 EFISKQILELD-PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             +  Q+LEL  P D   +V L    + AGL  +  E    M+ +
Sbjct: 493 RSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESR 537


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 201/605 (33%), Positives = 319/605 (52%), Gaps = 22/605 (3%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H ++ ++ +     V+ +L + YA+ G +     V  +    D+ S N +L  YA++   
Sbjct: 248 HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            +A   F ++    + P+  T       C SL     G+ +H   ++        + NAL
Sbjct: 308 SEAALLFARMLHEGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNAL 364

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY +CG  E+A  +F+  +  N +SW  +I G  Q G  ++ + L   M+ +G+ P  
Sbjct: 365 LDMYTRCGSPEEARHLFK-RIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVR 423

Query: 320 YTFTVALASCAS----LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            T+   L + AS     R    G   H++++  G A    +GTA+V MY+  G I EA  
Sbjct: 424 ATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAA 483

Query: 376 --QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
             Q   M      VSWNA I+   ++   + A+  F +M  +  A ++ T  ++L AC+ 
Sbjct: 484 SFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAG 543

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA-DVVSWNS 492
             +L   E +H  +  S  ESN+ V ++L   Y +CGS E A  +F ++    DVV +N+
Sbjct: 544 AAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNA 603

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI AYSQNG A +A+ LF +M  EG RP   +F++VLSACSH GL  +G ++F SM + Y
Sbjct: 604 MIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSY 663

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P E HY+C VD+LGRAG L  A   I  + +KPT  +W+ L  ACR + D+      
Sbjct: 664 GIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLA 723

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +  + ELDP D + YV LSN+ A AG   +A E R  M+ + + KE G SWIE+ ++++ 
Sbjct: 724 NSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHE 783

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVG 721
           F + ++SH    ++Y +L++L  +I +IG+            + EKE  +  HSERLA+ 
Sbjct: 784 FVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIA 843

Query: 722 FGLIS 726
            G++S
Sbjct: 844 LGVMS 848



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/614 (23%), Positives = 281/614 (45%), Gaps = 60/614 (9%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L     +  L  GRR HA I    +  ++ +   L+ +Y KC  +  +  V  ++ 
Sbjct: 32  LVRLLRAAGDDRLLSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLE 89

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D AS   ++  Y ++    +A   F ++    V+ +  T+  +L  C  L  + +G+ 
Sbjct: 90  VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  ++     K+ ++N LL +Y  CG +  A  +FE + +R+++SW A I    Q GD
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               L L   M+ +G+ P   T  +AL  CA++R +      H  V + G+     V TA
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQ---AIHFIVRESGLEQTLVVSTA 265

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +   Y+ LG +++AK+      +    VSWNA +  + ++    EA   F++M+    + 
Sbjct: 266 LASAYARLGHLYQAKEVFDRAAER-DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISP 324

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            + T  +    CS   SL     IH   ++   + ++ +G++L++ Y +CGS E+A  +F
Sbjct: 325 SKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF 381

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS------ 533
            ++   + VSWN+MI   SQ G+ ++A+ LF++M +EG+ P  +T+L +L A +      
Sbjct: 382 KRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEA 440

Query: 534 ---------HSGLVQDG----QKVFESMVKEY---GILPEEA---------------HYS 562
                    HS +V  G      +  ++VK Y   G + E A                ++
Sbjct: 441 RAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRCHSDLKMAEFISKQILEL 619
            ++  L + G  + AL F   + +   AP       +  AC   + L   E +   +   
Sbjct: 501 AIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS 560

Query: 620 DPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
             + +  V   L++MY   G     E  R++ +   + ++     + ++N +   +SQN 
Sbjct: 561 GMESNLFVATALASMYGRCG---SLESAREIFEKVAVERD-----VVIFNAMIAAYSQNG 612

Query: 679 SHSEMPKVYEKLKQ 692
              E  K++ +++Q
Sbjct: 613 LAGEALKLFWRMQQ 626



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 140/294 (47%), Gaps = 6/294 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY---LDIASCNCLLAG 192
           GR+ H+ I       +  +  ++V MYA CG I    A  ++       D+ S N +++ 
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            +++    +A  FF ++D   V PN  T   +L  C   +A+ EG+ +H         S 
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESN 565

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             V+ AL +MY +CG +E A  +FE + V+R+V+ + A+I  + Q+G   + L+L   M+
Sbjct: 566 LFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQ 625

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           ++G  P+E +F   L++C+    +  G+ +F +     G+A  +      VD+    G +
Sbjct: 626 QEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWL 685

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
            +A++ ++ M    + + W   + G  R  +  +     + MVR     DE  Y
Sbjct: 686 ADAEELIRCMDVKPTVLVWKT-LLGACRKYRDVDRGRLANSMVRELDPGDESAY 738



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 103/212 (48%), Gaps = 7/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + VL  C+    L  G   H  +  + +  + FV  +L +MY +CG ++S   + +++  
Sbjct: 535 VAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAV 594

Query: 181 -LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+   N ++A Y++N L  +A   F ++     +P+  ++ ++L+ C      DEG +
Sbjct: 595 ERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWE 654

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYI--KCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
           +  ++M+  Y    +  +    + +  + G + DAE +   + V+  V+ W  ++   ++
Sbjct: 655 IF-RSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRK 713

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + D ++      ++RE  +DP + +  V L++
Sbjct: 714 YRDVDRGRLANSMVRE--LDPGDESAYVVLSN 743


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 211/626 (33%), Positives = 333/626 (53%), Gaps = 30/626 (4%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           FVI+ ++  S    LE G++ HA++ K     D +V  SL+++Y K G       V ++M
Sbjct: 135 FVIKSVAGIS---SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191

Query: 179 PYLDIASCNCLLAGYAKNALFD--QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  DI S N +++GY   AL D   +   F ++     +P+ ++  + L  C  + +   
Sbjct: 192 PERDIVSWNSMISGYL--ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249

Query: 237 GKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           GK++H   ++ +       V  ++L MY K G +  AE +F G++QRN+++W  +I  + 
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309

Query: 296 QHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           ++G        +C  +   ++G+ P+  T    L + A L     G   H   ++RG   
Sbjct: 310 RNGRVTDAF--LCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLP 363

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              + TA++DMY   G++  A+     M +  + +SWN+ IA + +N K   A+E F ++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQEL 422

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             +    D  T +SIL A +   SL+   +IH+ IVKS++ SN  + +SL+  Y  CG  
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA + F+ +   DVVSWNS+I AY+ +G  R ++ LF +M+   + P  STF ++L+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S SG+V +G + FESM +EYGI P   HY CM+DL+GR G    A  F+  +P  PTA I
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L  A R H D+ +AEF ++QI +++ D+   YV L NMYAEAG   D    + LM+ 
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI--EDI-GHTDNEKED 709
           K IS+    S +E   K + F + ++SH    K+YE L  + + +  EDI  H  +    
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRP 722

Query: 710 RVLY---------HSERLAVGFGLIS 726
             L          HS RLA  FGLIS
Sbjct: 723 ETLVKSRSNSPRRHSVRLATCFGLIS 748



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 267/519 (51%), Gaps = 18/519 (3%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +M   D    N ++ G+    L+ +A  F+ ++    V+ + +TY  ++     +S+++E
Sbjct: 89  EMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEE 148

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK++HA  +KL ++S   V N+L+++Y+K G   DAE VFE + +R+++SW ++I+G+  
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-F 355
            GD    L L   M + G  P+ ++   AL +C+ + +  MG   H   ++  +  GD  
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V T+I+DMYS  GE+  A++    M +  + V+WN  I  + RN +  +A   F +M   
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327

Query: 416 DAACDEFTYSSILKACSLLPSLATCE--QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           +    +     ++ + +LLP+ A  E   IH   ++  F  ++ + ++LI+ Y +CG  +
Sbjct: 328 NGLQPD-----VITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            AE +F ++   +V+SWNS+I AY QNG+   A+ LF+++    + P ++T  ++L A +
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
            S  + +G+++   +VK           + +V +    G LE A    +++ +K     W
Sbjct: 443 ESLSLSEGREIHAYIVKSR-YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS-W 500

Query: 594 RPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
             +  A   H   +++ ++  +++   ++P+ +  + +L    + +G+  +  E  + MK
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST-FASLLAACSISGMVDEGWEYFESMK 559

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
            +E   +PG   IE Y  +     +  + S   +  E++
Sbjct: 560 -REYGIDPG---IEHYGCMLDLIGRTGNFSAAKRFLEEM 594



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 172/334 (51%), Gaps = 9/334 (2%)

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
           +MEDA  +F+ + + +   W  +I GF   G Y + ++    M   G+  + +T+   + 
Sbjct: 79  LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           S A + +   G   HA VIK G     +V  +++ +Y  LG  W+A+K  +EM +    V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER-DIV 197

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SWN+ I+G+        ++  F +M++     D F+  S L ACS + S    ++IH   
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257

Query: 448 VKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           V+S+ E+ +V V +S+++ Y+K G    AER+F+ +   ++V+WN MI  Y++NGR   A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317

Query: 507 IILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
            + F+KM  + G++P   T + +L A +    + +G+ +    ++  G LP     + ++
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALI 372

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           D+ G  G+L+ A +    +  K     W  + AA
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 31/173 (17%)

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDA-----------AC--------------------DE 421
           + GF  ++  E+A++ F +M + DA           +C                    D 
Sbjct: 71  LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FTY  ++K+ + + SL   ++IH+ ++K  F S+V+V +SLI  Y K G   DAE+VF +
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           +   D+VSWNSMI  Y   G    +++LF++M+  G +P   + ++ L ACSH
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  +L   +    L  GR  HA I K+    +  +  SLV+MYA CGD++      
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ S N ++  YA +     +   F ++    V PN  T++++LA C     +D
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAII 291
           EG + + ++MK +Y     + +   +L +  + G    A+   E +  V    I W +++
Sbjct: 550 EGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI-WGSLL 607

Query: 292 NGFKQHGD 299
           N  + H D
Sbjct: 608 NASRNHKD 615


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 327/610 (53%), Gaps = 20/610 (3%)

Query: 133 LELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           L+ GR  H  +  T +      +   LVNMYAKCG I     V   M   D  S N ++ 
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMIT 108

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G  +N  F +A   +  +   ++ P  +T  + L+ C SL     G+Q+H +++KL    
Sbjct: 109 GLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 168

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             +VSNAL+T+Y + G + +   +F  + + + +SW +II       +   P  + C + 
Sbjct: 169 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAS-SERSLPEAVACFLN 227

Query: 312 --EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
               G   N  TF+  L++ +SL    +G   H   +K  +A       A++  Y   GE
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +   +K    M +    V+WN+ I+G+  N+   +A++    M++     D F Y+++L 
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A + + +L    ++H+  V++  ES+V VGS+L++ Y+KCG  + A R F+ +   +  S
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKVFESM 548
           WNSMI  Y+++G+  +A+ LF  M ++G  P +  TF+ VLSACSH+GL+++G K FESM
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
              YG+ P   H+SCM DLLGRAG+L+    FI  +P+KP   IWR +  AC C ++ + 
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGAC-CRANGRK 526

Query: 609 AEFISK---QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
           AE   K    + +L+P++A  YV L NMYA  G   D  + RK MK  ++ KE G SW+ 
Sbjct: 527 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 586

Query: 666 VYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYH 714
           + + ++ F + +KSH +   +Y+KLK+L +++ D G+               KE+ + YH
Sbjct: 587 MKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYH 646

Query: 715 SERLAVGFGL 724
           SE+LAV F L
Sbjct: 647 SEKLAVAFVL 656



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 157/316 (49%), Gaps = 4/316 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I  LS C+  +  +LG++ H    K  +  +  V+ +L+ +YA+ G +     +   MP
Sbjct: 138 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 197

Query: 180 YLDIASCNCLLAGYAKNAL-FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D  S N ++   A +     +A + FL       + N  T+S++L+   SLS  + GK
Sbjct: 198 EHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGK 257

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQH 297
           Q+H   +K     +    NAL+  Y KCG M+  E +F  + + R+ ++W ++I+G+  +
Sbjct: 258 QIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHN 317

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
               K L LV  M + G   + + +   L++ AS+     G   HA  ++  +     VG
Sbjct: 318 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 377

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRND 416
           +A+VDMYS  G +  A +    M    +S SWN+ I+G+ R+ + EEA++ F+ M +   
Sbjct: 378 SALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQ 436

Query: 417 AACDEFTYSSILKACS 432
              D  T+  +L ACS
Sbjct: 437 TPPDHVTFVGVLSACS 452



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 7/183 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      VLS  +    LE G   HA   +  +  D  V ++LV+MY+KCG +   +  
Sbjct: 337 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 396

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
              MP  +  S N +++GYA++   ++A   F  +KLDG    P+H T+  +L+ C    
Sbjct: 397 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDG-QTPPDHVTFVGVLSACSHAG 455

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTA 289
            ++EG + H ++M   Y     + +   +  +  + G ++  E   + + V+ NV+ W  
Sbjct: 456 LLEEGFK-HFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRT 514

Query: 290 IIN 292
           ++ 
Sbjct: 515 VLG 517


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 191/598 (31%), Positives = 320/598 (53%), Gaps = 3/598 (0%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V+  S+E   D   V   L  C+    L LG+  H  + K  + GD FV ++L+++Y KC
Sbjct: 231 VSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKC 290

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTM 224
           G +   V V  + P  D+     +++GY ++   + A +FF ++   + V P+  T  ++
Sbjct: 291 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 350

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
            + C  LS    G+ +H    +    +K  ++N+LL +Y K G +++A ++F  +  +++
Sbjct: 351 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 410

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ISW+ ++  +  +G     L L   M +  I PN  T    L +CA + N   G   H  
Sbjct: 411 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHEL 470

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            +  G  +   V TA++DMY       +A      M K    ++W    +G+  N    E
Sbjct: 471 AVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK-DVIAWAVLFSGYADNGMVHE 529

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           ++  F  M+ +    D      IL   S L  L     +H+ ++K+ FE+N  +G+SLIE
Sbjct: 530 SMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIE 589

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNS 523
            Y KC S EDA +VF  +T  DVV+W+S+I AY  +G+  +A+ LF +M      +P N 
Sbjct: 590 VYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNV 649

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+++LSACSHSGL+++G  +F+ MV +Y + P   HY+ MVDLLGR G+L++AL  I+N
Sbjct: 650 TFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINN 709

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P++    IW  L  ACR H ++KM E  +K +  LDP+ A  Y+ LSN+Y+       A
Sbjct: 710 MPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSA 769

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            + R+L+K K ++K  G S +E+ N++  F + ++ H E   +YE L +L  ++ ++ 
Sbjct: 770 TKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVA 827



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 205/430 (47%), Gaps = 12/430 (2%)

Query: 117 KQFVIEVLSYCSREECLELG-RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +  ++++L  C    C +L   + H+   K  +  D F+   L  +YA+   I     + 
Sbjct: 139 RNLLVKLLETC----CSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLF 194

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG-----IDVQPNHYTYSTMLAICGS 230
           ++ P+  +   N LL  Y     + +  S F +++      I+ +P++Y+ S  L  C  
Sbjct: 195 QETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAG 254

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  +  GK +H    K++      V +AL+ +Y KCG M DA  VF    + +V+ WT+I
Sbjct: 255 LRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSI 314

Query: 291 INGFKQHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I+G++Q G  E  L     M   + + P+  T     ++CA L N  +G   H  V ++G
Sbjct: 315 ISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG 374

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     +  +++ +Y   G I  A    +EM      +SW+  +A +  N    + ++ F
Sbjct: 375 LDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMVACYADNGAETDVLDLF 433

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           ++M+      +  T  S+L+AC+ + +L    +IH   V   FE    V ++L++ Y KC
Sbjct: 434 NEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKC 493

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            S E A  +F+++   DV++W  +   Y+ NG   +++ +F  M+  G RP     + +L
Sbjct: 494 FSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKIL 553

Query: 530 SACSHSGLVQ 539
           +  S  G++Q
Sbjct: 554 TTISELGILQ 563


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 327/618 (52%), Gaps = 51/618 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-----DIASCNCLLAGYAKNALFDQAFSF 205
           DQ    ++++ YA+ G  +       +M  L     ++ S   L+AG  +N    +A S 
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYI 264
           F K+    V+PN  T ++ ++ C +LS +  G+++H   +K++ L S   V N+L+  Y 
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409

Query: 265 KC----------GMMEDAESV--------------------------FEGLVQRNVISWT 288
           KC          GM++  + V                          F+G ++ ++I+W 
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-IEPDIITWN 468

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            ++ GF Q+GD +  L     M   G+DPN  T + ALA+C  +RN  +G   H  V++ 
Sbjct: 469 GLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRN 528

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
            + L   VG+A++ MYSG   +  A     E+  +   V WN+ I+   ++ ++  A++ 
Sbjct: 529 HIELSTGVGSALISMYSGCDSLEVACSVFSEL-STRDVVVWNSIISACAQSGRSVNALDL 587

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
             +M  ++   +  T  S L ACS L +L   ++IH  I++   ++   + +SLI+ Y +
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGR 647

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CGS + + R+F  +   D+VSWN MI  Y  +G    A+ LF+     G++P + TF  +
Sbjct: 648 CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNL 707

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACSHSGL+++G K F+ M  EY + P    Y+CMVDLL RAG+    L FI  +P +P
Sbjct: 708 LSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEP 767

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
            A +W  L  ACR H +  +AE+ ++ + EL+P  +  YV ++N+Y+ AG   DA + R 
Sbjct: 768 NAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 827

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE 708
           LMK + ++K PGCSWIEV  K++ F   + SH  M ++  K  +L     D+   ++EKE
Sbjct: 828 LMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISGKDGKL-----DV--DEDEKE 880

Query: 709 DRVLYHSERLAVGFGLIS 726
             +  HSE++A+ FGLIS
Sbjct: 881 FSLCGHSEKIALAFGLIS 898



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 208/460 (45%), Gaps = 41/460 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C +   L LG + HA +    V   +F+ + L+ +Y + G ++    +  +M   +
Sbjct: 95  ILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERN 154

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++  Y     +++    F  +    V+P+H+ +  +   C  L     GK ++ 
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             + + +   + V  ++L M+IKCG M+ A   FE +  ++V  W  +++G+   G+++K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+ +  M+  G+ P++ T+                                    AI+ 
Sbjct: 275 ALKCISDMKLSGVKPDQVTW-----------------------------------NAIIS 299

Query: 363 MYSGLGEIWEAKKQLKEMGK----SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            Y+  G+  EA K   EMG       + VSW A IAG  +N    EA+  F +MV     
Sbjct: 300 GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAER 477
            +  T +S + AC+ L  L    +IH   +K  + +S++ VG+SL++ Y KC S E A R
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F  +   D+VSWN+M+  Y+  G   +AI L  +M  +GI P   T+  +++  +  G 
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            +   + F+ M    G+ P     S  +   G+   L++ 
Sbjct: 480 GKAALEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLG 518



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 154/627 (24%), Positives = 269/627 (42%), Gaps = 95/627 (15%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E +    FV  +V   CS  +   +G+  +  +      G+  V  S+++M+ KCG +  
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDI 243

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAIC 228
                +++ + D+   N +++GY     F +A      +KL G  V+P+  T+       
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG--VKPDQVTW------- 294

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---EGL--VQRN 283
                                       NA+++ Y + G  E+A   F    GL   + N
Sbjct: 295 ----------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPN 326

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SWTA+I G +Q+G   + L +   M  +G+ PN  T   A+++C +L     G   H 
Sbjct: 327 VVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHG 386

Query: 344 QVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
             IK      D  VG ++VD Y+    +  A+++   M K    VSWNA +AG+      
Sbjct: 387 YCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG-MIKQTDLVSWNAMLAGYALRGSH 445

Query: 403 EEAIE----------------------AFSQMVRNDAACDEF-------------TYSSI 427
           EEAIE                       F+Q     AA + F             T S  
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L AC  + +L   ++IH  ++++  E +  VGS+LI  Y+ C S E A  VFS+L+  DV
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           V WNS+I A +Q+GR+  A+ L  +M +  +     T ++ L ACS    ++ G+++ + 
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQF 625

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           +++  G+       + ++D+ GR G ++ +      +P +     W  + +    H    
Sbjct: 626 IIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS-WNVMISVYGMHGFGM 683

Query: 608 MAE--FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM--KEISKEPGCSW 663
            A   F   + + L P+    ++T +N+ +        EE  K  KM   E + +P    
Sbjct: 684 DAVNLFQXFRTMGLKPN----HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPA--- 736

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           +E Y  +    S+    +E  +  EK+
Sbjct: 737 VEQYACMVDLLSRAGQFNETLEFIEKM 763



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 23/419 (5%)

Query: 291 INGFKQHGDYEKPLRL----VCLMREDGIDPNE--YTFTVALASCASLRNSHMGYMFHAQ 344
           I GF   G   +   L    + L   D  +P+E    +   L  C  L N  +G+  HAQ
Sbjct: 55  ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           ++  G+ + +F+G+ ++++Y   G + +A++   +M +  +  SW A +  +      EE
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER-NVFSWTAIMEMYCGLGDYEE 173

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
            I+ F  MV      D F +  + KACS L +    + ++  ++   FE N  V  S+++
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 233

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            + KCG  + A R F ++   DV  WN M+  Y+  G  +KA+     M + G++P   T
Sbjct: 234 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           + A++S  + SG  ++  K F  M       P    ++ ++    + G    AL     +
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353

Query: 585 ---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGL 639
               +KP +       +AC   S L+    I    ++++  D+ + V  +L + YA+   
Sbjct: 354 VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRS 413

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              A  +  ++K  ++      SW    N +   ++   SH E  ++  ++K   Q IE
Sbjct: 414 VEVARRKFGMIKQTDL-----VSW----NAMLAGYALRGSHEEAIELLSEMK--FQGIE 461



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++  L  CS+   L  G+  H  I +  +    F+  SL++MY +CG I+    +   MP
Sbjct: 603 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 662

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S N +++ Y  +     A + F     + ++PNH T++ +L+ C     I+EG +
Sbjct: 663 QRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWK 722

Query: 240 LHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            + + MK +Y    AV     ++ +  + G   +     E +  + N   W +++   + 
Sbjct: 723 -YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781

Query: 297 H 297
           H
Sbjct: 782 H 782


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 215/686 (31%), Positives = 346/686 (50%), Gaps = 91/686 (13%)

Query: 126 YCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDI 183
           YC   E L+  R+    I++     D+    ++V+ Y   GDI    +V ++ P    D 
Sbjct: 59  YCKSSE-LDYARQLFDEISEP----DKIARTTMVSGYCASGDIALARSVFEETPVSMRDT 113

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ---L 240
              N ++ G++ N     A + F K+     +P+ +TY+++LA  G    +D+ KQ    
Sbjct: 114 VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLA--GLALVVDDEKQCVQF 171

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCG----MMEDAESVFEGLVQRNVISWT-------- 288
           HA  +K      T+VSNAL+++Y +C     ++  A  VF+ + +++  SWT        
Sbjct: 172 HAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVK 231

Query: 289 ------------------------AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
                                   A+I+G+   G Y++ L +V  M   GI+ +E+T+  
Sbjct: 232 NGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPS 291

Query: 325 ALASCASLRNSHMGYMFHAQVIKR-----------------------------GMALGDF 355
            + +CA+ R   +G   HA V++R                              M   D 
Sbjct: 292 VIRACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDL 351

Query: 356 VG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           V   A++  Y   G I EAK   KEM K  + +SW   I+G   N   EE ++ FS M R
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEM-KEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                 ++ +S  +K+C++L +    +Q H+++VK  F+S++  G++LI  Y KCG  E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A++VF  +   D VSWN++I A  Q+G   +A+ ++E+M+ +GIRP   TFL VL+ACSH
Sbjct: 471 AQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSH 530

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GLV  G+K F SM   Y I P   HY+ ++DLL R+GK   A   I +LP KPTA IW 
Sbjct: 531 AGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWE 590

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L + CR H ++++    + ++  L P+    Y+ LSNMYA  G   +    RKLM+ + 
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRG 650

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH------------ 702
           + KE  CSWIE+  +++ F   + SH E   VY+ L+ L +++  +G+            
Sbjct: 651 VKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVE 710

Query: 703 TDNEKEDRVLYHSERLAVGFGLISLP 728
           +D  KED +  HSE++AV FGL+ LP
Sbjct: 711 SDGHKEDMLTTHSEKIAVAFGLMKLP 736



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 183/375 (48%), Gaps = 47/375 (12%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           QP+ +  + ++ +    S +D  +QL  +  +   +++T     +++ Y   G +  A S
Sbjct: 46  QPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTT----MVSGYCASGDIALARS 101

Query: 275 VFE--GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA-S 331
           VFE   +  R+ + + A+I GF  + D    + L C M+ +G  P+++T+   LA  A  
Sbjct: 102 VFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALV 161

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG--------------LGEIWE----- 372
           + +      FHA  +K G      V  A+V +YS                 +I E     
Sbjct: 162 VDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERS 221

Query: 373 ----------------AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
                            K+ LK M ++   V++NA I+G+      +EA+E   +MV + 
Sbjct: 222 WTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSG 281

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              DEFTY S+++AC+    L   +Q+H+ +++ + + + H  +SL+  Y KCG + +A 
Sbjct: 282 IELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKCGKFNEAR 340

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F ++ A D+VSWN+++  Y  +G   +A ++F++M  + I     +++ ++S  + +G
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENG 396

Query: 537 LVQDGQKVFESMVKE 551
             ++G K+F  M +E
Sbjct: 397 FGEEGLKLFSCMKRE 411



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 35/314 (11%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+     V+  C+    L+LG++ HA + +       F   SLV +Y KCG      A+
Sbjct: 284 LDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHF-DNSLVTLYYKCGKFNEARAI 342

Query: 175 VKQMPYLDIASCNCLLAGY-------------------------------AKNALFDQAF 203
            ++MP  D+ S N LL+GY                               A+N   ++  
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             F  +     +P  Y +S  +  C  L A   G+Q HAQ +K+ + S  +  NAL+TMY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMY 462

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KCG++E+A+ VF  +   + +SW A+I    QHG   + + +   M + GI P+  TF 
Sbjct: 463 AKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFL 522

Query: 324 VALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
             L +C  A L +    Y    + + R     D     ++D+    G+  EA+  ++ + 
Sbjct: 523 TVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYAR-LIDLLCRSGKFSEAESIIESLP 581

Query: 382 KSASSVSWNAQIAG 395
              ++  W A ++G
Sbjct: 582 FKPTAEIWEALLSG 595



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 38/155 (24%)

Query: 424 YSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           Y++ L+ C  L   SL     +H  I+   F+ + H+ + LI+ Y K    + A ++F +
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74

Query: 482 LTAA---------------------------------DVVSWNSMIKAYSQNGRARKAII 508
           ++                                   D V +N+MI  +S N     AI 
Sbjct: 75  ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           LF KM  EG +P + T+ +VL+  +   LV D +K
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLA---LVVDDEK 166


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 318/596 (53%), Gaps = 43/596 (7%)

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           ++V   +P  +   CN  L   +++   ++    + ++    +  + +++  +L     +
Sbjct: 76  LSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRV 135

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            ++ EG ++H    KL + S   V   L+ MY  CG + +A  +F+ +  R+V++W+ +I
Sbjct: 136 KSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMI 195

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+ Q G +   L L   M+   ++P+E   +  L++C    N   G M H  +++  + 
Sbjct: 196 DGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV 255

Query: 352 LGDFVGTAIVDM-------------------------------YSGLGEIWEAKKQLKEM 380
           +   + +A+V M                               YS LG+I  A+    +M
Sbjct: 256 VDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQM 315

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            K    V W+A I+G+  +   +EA+  F++M       D+ T  S++ AC+ L +L   
Sbjct: 316 VKK-DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQA 374

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           + IH  + K+ F   + + ++LIE Y KCGS E A R+F ++   +V+SW  MI A++ +
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMH 434

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G A  A+  F +M  E I P   TF+ VL ACSH+GLV++G+K+F SM+ E+ I P+  H
Sbjct: 435 GDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVH 494

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y CMVDL GRA  L  AL  +  +P+ P   IW  L AACR H ++++ EF +K++LELD
Sbjct: 495 YGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELD 554

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           PD    +V LSN+YA+A    D  + RKLMK K ISKE GCS  E+ N+I+ F   ++SH
Sbjct: 555 PDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSH 614

Query: 681 SEMPKVYEKLKQLMQQIEDIGHTDNEKEDRV-----------LYHSERLAVGFGLI 725
               ++YEKL +++ +++ +G++ N     V           L+HSE+LA+ +GL+
Sbjct: 615 KHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLM 670



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 36/413 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L   SR + L  G   H L  K     D FV   LV MYA CG I     +  +M + D
Sbjct: 128 LLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRD 187

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + + ++ GY ++ LF+ A   F ++   +V+P+    ST+L+ CG    +  GK +H 
Sbjct: 188 VVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHD 247

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMM-------------------------------ED 271
             M+   +    + +AL+TMY  CG M                               E+
Sbjct: 248 FIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIEN 307

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A SVF  +V+++++ W+A+I+G+ +    ++ L L   M+  GI P++ T    + +CA 
Sbjct: 308 ARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAH 367

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L         H  V K G      +  A+++MY+  G +  A++   +M +  + +SW  
Sbjct: 368 LGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK-NVISWTC 426

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I+ F  +     A+  F QM   +   +  T+  +L ACS    +    +I   ++   
Sbjct: 427 MISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEH 486

Query: 452 --FESNVHVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNG 501
                +VH G  +++ + +     +A E V +   A +V+ W S++ A   +G
Sbjct: 487 NITPKHVHYG-CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 208/469 (44%), Gaps = 49/469 (10%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI--KCGM---MEDAE 273
           +++ T+ +   S +++   KQ+HAQ ++    SK   S +LL   +   C +   ++ A 
Sbjct: 21  HSHHTLFSALSSATSLTHLKQVHAQILR----SKLDRSTSLLVKLVISSCALSSSLDYAL 76

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           SVF  + +         +    +  + EK L +   MR  G+  + ++F   L + + ++
Sbjct: 77  SVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVK 136

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +   G   H    K G     FV T +V MY+  G I EA+    +M      V+W+  I
Sbjct: 137 SLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHR-DVVTWSIMI 195

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G+ ++    +A+  F +M   +   DE   S++L AC    +L+  + IH  I+++   
Sbjct: 196 DGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV 255

Query: 454 SNVHVGSSLIEAYNKCGSW-------------------------------EDAERVFSQL 482
            + H+ S+L+  Y  CGS                                E+A  VF+Q+
Sbjct: 256 VDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQM 315

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+V W++MI  Y+++   ++A+ LF +M   GI+P   T L+V++AC+H G + D  
Sbjct: 316 VKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL-DQA 374

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K     V + G        + ++++  + G LE A      +P K     W  + +A   
Sbjct: 375 KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVIS-WTCMISAFAM 433

Query: 603 HSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           H D   A     Q+ +  ++P +   +V +    + AGL    EE RK+
Sbjct: 434 HGDAGSALRFFHQMEDENIEP-NGITFVGVLYACSHAGL---VEEGRKI 478



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 180/423 (42%), Gaps = 75/423 (17%)

Query: 93  DGFIDDGCSNTV-----PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA 147
           DG+   G  N        +  Y++E   D+  +  VLS C R   L  G+  H  I +  
Sbjct: 196 DGYCQSGLFNDALLLFEEMKNYNVEP--DEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253

Query: 148 VCGDQFVTASLVNMYAKCGDI------------KSMVA-------------------VVK 176
           +  D  + ++LV MYA CG +            K++VA                   V  
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           QM   D+   + +++GYA++    +A + F ++  + ++P+  T  +++  C  L A+D+
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ 373

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
            K +H    K  +     ++NAL+ MY KCG +E A  +F+ + ++NVISWT +I+ F  
Sbjct: 374 AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM 433

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HGD    LR    M ++ I+PN  TF   L +C+           HA +++ G  +    
Sbjct: 434 HGDAGSALRFFHQMEDENIEPNGITFVGVLYACS-----------HAGLVEEGRKI---- 478

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
                  YS           + E   +   V +   +  F R     EA+E    M    
Sbjct: 479 ------FYS----------MINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---P 519

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDA 475
            A +   + S++ AC +   +   E    R+++   + +  HV  S I  Y K   WED 
Sbjct: 520 LAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNI--YAKARRWEDV 577

Query: 476 ERV 478
            +V
Sbjct: 578 GQV 580


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 188/575 (32%), Positives = 323/575 (56%), Gaps = 12/575 (2%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  +  S   L++G ++N +   A + F  +    V P  +  S+      +L A   G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            QLH   ++L + ++  V++ L  MY KCG++ +A  VF+ + Q++ ++WTA+I+G+ ++
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 298 GDYEKP-LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G  E   L    + RE  +  +++ F   L++   L++  +    H  V K G  L   V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             A++DMY+   ++  A + LK      + VS  + I G+      EEA+  + ++ R  
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQG 240

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +EFT+SS++K C++   L    Q+H++++K+    +  VGS+L++ Y KCG    + 
Sbjct: 241 VEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSM 300

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F+++     ++WN++I  ++Q+G  R+AI  F++M+  GIRP +  F+++L+ACSH+G
Sbjct: 301 QLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 360

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV +G K F SM + +GI P+E HYSC++D  GRAG+L+ A  FIS +PIKP A  W  L
Sbjct: 361 LVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSL 420

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR     ++ E  ++ +++L+P +  ++V+LS +YA  G   D +  RKLM+   I 
Sbjct: 421 LGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIK 480

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           K PG SW++   K + F S++ SH +   +YEKL++L  +I++ G+            D 
Sbjct: 481 KLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDI 540

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            KE  + YHSER+AV F LIS+PA       + L 
Sbjct: 541 AKERILRYHSERIAVAFALISMPATKPIIVKKNLR 575



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 177/360 (49%), Gaps = 19/360 (5%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLD 210
           FV ++L +MY+KCG +     V  QMP  D  +   ++ GYAKN   + A   F  +K +
Sbjct: 77  FVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKRE 136

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G+ V  + + + ++L+  G L      K +H    K  +  + AV NAL+ MY K   +E
Sbjct: 137 GL-VGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVE 195

Query: 271 DAESVFE-GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
            A  V +      NV+S T++I+G+ +    E+ L +   +R  G++PNE+TF+  +  C
Sbjct: 196 SASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGC 255

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A       G   HAQVIK  +    FVG+ +VDMY   G I  + +   E+ +  + ++W
Sbjct: 256 AMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEI-EYRTDIAW 314

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL-------LPSLATCEQ 442
           NA I  F ++    EAI+AF +M+ +    +   + S+L ACS        L    + ++
Sbjct: 315 NAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKE 374

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNG 501
            H   ++ K E      S +I+ Y + G  ++A +  S++    +   W S++ A    G
Sbjct: 375 AHG--IEPKEEHY----SCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 428



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 173/371 (46%), Gaps = 34/371 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           AC++F++ P++  ++ + +I                         DG+  +G      ++
Sbjct: 95  ACRVFDQMPQKDAVAWTAMI-------------------------DGYAKNGSLEAAVLS 129

Query: 108 CYSL--ESLL--DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
              +  E L+  D+     VLS     +   L +  H  +TK     +  V  +L++MYA
Sbjct: 130 FRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 189

Query: 164 KCGDIKSMVAVVKQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           K  D++S   V+K  P   ++ S   ++ GY +    ++A   +++L    V+PN +T+S
Sbjct: 190 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 249

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           +M+  C   + +++G QLHAQ +K   +  + V + L+ MY KCG++  +  +F  +  R
Sbjct: 250 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 309

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYM 340
             I+W A+IN F QHG   + ++    M   GI PN   F   L +C  A L +  + Y 
Sbjct: 310 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKY- 368

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           F++     G+   +   + I+D Y   G + EA K + EM    ++  W   + G  R +
Sbjct: 369 FYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW-CSLLGACRMR 427

Query: 401 KTEEAIEAFSQ 411
            ++E  E  +Q
Sbjct: 428 GSKELGEVAAQ 438


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 190/576 (32%), Positives = 317/576 (55%), Gaps = 26/576 (4%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  ++ +   L+ GY  N+        F+++  +   P+HYT    L  C +   +D G
Sbjct: 99  MPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLG 158

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           KQ+H   +K    S T++ N+L ++Y K G ++ A   F  + ++NVI+WT +I+   + 
Sbjct: 159 KQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED 218

Query: 298 GD-YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            +  E  + L   M  DG+ PNE+T T  ++ C +  + ++G    A   K G      V
Sbjct: 219 EECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPV 278

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR-----------NQKTEEA 405
             + + +Y   GE  EA +  ++M + AS ++WNA I+G+ +             +  +A
Sbjct: 279 KNSTMYLYLRKGETDEAMRLFEQM-EDASIITWNAMISGYAQIMDSAKDDLQARSRGFQA 337

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  F  + R+    D FT+SSIL  CS + +L   EQIH++ +KS F S+V V S+L+  
Sbjct: 338 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNM 397

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           YNKCG  +DA + F ++     V+W SMI  YSQ+G+ ++AI LFE+M + G+RP   TF
Sbjct: 398 YNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITF 457

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +++LSACS++GLV++ +  F+ M KEY I P   HY CM+D+  R G++E A  FI    
Sbjct: 458 VSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTG 517

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +P   IW  L A CR H ++++A + + ++LEL P     Y+ L NMY       D   
Sbjct: 518 FEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVAR 577

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--- 702
            RKLMK +++      SWI + +K+Y F + +++H +  ++Y+ L+ L+++ + IG+   
Sbjct: 578 VRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPY 637

Query: 703 -----TDNEKEDR-----VLYHSERLAVGFGLISLP 728
                +D+E +++     + +HSERLAV  GL+  P
Sbjct: 638 QNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTP 673



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 171/321 (53%), Gaps = 23/321 (7%)

Query: 111 LESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           ++ ++  +F +  V+S C     L LG++  A   K     +  V  S + +Y + G+  
Sbjct: 234 MDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETD 293

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAK---NALFD--------QAFSFFLKLDGIDVQPNH 218
             + + +QM    I + N +++GYA+   +A  D        QA + F  L    ++P+ 
Sbjct: 294 EAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDL 353

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           +T+S++L++C ++ A+++G+Q+HAQT+K  +LS   V++AL+ MY KCG ++DA   F  
Sbjct: 354 FTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLE 413

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  R  ++WT++I+G+ QHG  ++ ++L   MR  G+ PNE TF   L++C     S+ G
Sbjct: 414 MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC-----SYAG 468

Query: 339 YMFHAQ----VIKRGMALGDFVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +  A+    ++K+   +   V     ++DM+  LG + +A   +K  G   +   W++ 
Sbjct: 469 LVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSL 528

Query: 393 IAGFFRNQKTEEAIEAFSQMV 413
           +AG   +   E A  A  +++
Sbjct: 529 VAGCRSHGNMELAFYAADKLL 549



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 215/443 (48%), Gaps = 19/443 (4%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           ++LG++ H    K        +  SL ++YAK G + S +    ++P  ++ +   +++ 
Sbjct: 155 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA 214

Query: 193 YAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            A++    +   S F+ +    V PN +T ++++++CG+   ++ GKQ+ A + K+   +
Sbjct: 215 CAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET 274

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK--------- 302
              V N+ + +Y++ G  ++A  +FE +   ++I+W A+I+G+ Q  D  K         
Sbjct: 275 NLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRG 334

Query: 303 --PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L +   ++   + P+ +TF+  L+ C+++     G   HAQ IK G      V +A+
Sbjct: 335 FQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 394

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V+MY+  G I +A K   EM  + + V+W + I+G+ ++ + +EAI+ F +M       +
Sbjct: 395 VNMYNKCGCIQDANKAFLEM-PTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPN 453

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVF 479
           E T+ S+L ACS    +   E     + K    E  V     +I+ + + G  EDA    
Sbjct: 454 EITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFI 513

Query: 480 SQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN-STFLAVLSACSHSGL 537
            +     +   W+S++     +G    A    +K++   ++P    T++ +L+    +  
Sbjct: 514 KRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLL--ELKPKGIETYILLLNMYISTER 571

Query: 538 VQDGQKVFESMVKE-YGILPEEA 559
            QD  +V + M +E  GIL + +
Sbjct: 572 WQDVARVRKLMKQEDVGILRDRS 594



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 200/421 (47%), Gaps = 25/421 (5%)

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  +F+G+ +RNV++WTA++ G+  +      L +   M E G  P+ YT    L +C 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +  +  +G   H   IK G      +G ++  +Y+ LG +  A +    + +  + ++W 
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEK-NVITWT 209

Query: 391 AQIAGFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
             I+    +++  E  +  F  M+ +    +EFT +S++  C     L   +Q+ +   K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ---------- 499
              E+N+ V +S +  Y + G  ++A R+F Q+  A +++WN+MI  Y+Q          
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 500 -NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
              R  +A+ +F  +    ++P   TF ++LS CS    ++ G+++    +K  G L + 
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKS-GFLSDV 388

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQI 616
              S +V++  + G ++ A      +P + T   W  + +    H   + A   F   ++
Sbjct: 389 VVNSALVNMYNKCGCIQDANKAFLEMPTR-TFVTWTSMISGYSQHGQPQEAIQLFEEMRL 447

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP-----GCSWIEVYNKIY 671
             + P++   +V+L +  + AGL  +AE    +MK KE   EP     GC  I+++ ++ 
Sbjct: 448 AGVRPNE-ITFVSLLSACSYAGLVEEAEHYFDMMK-KEYCIEPVVDHYGC-MIDMFVRLG 504

Query: 672 R 672
           R
Sbjct: 505 R 505


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 195/593 (32%), Positives = 324/593 (54%), Gaps = 21/593 (3%)

Query: 149 CGDQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL 207
           C  + +  S +V MY K   ++    V  +MP  D    N +++GY KN ++ ++   F 
Sbjct: 150 CDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFR 209

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDE---GKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            L  I+        +T+L I  +++ + E   G Q+H+   K    S   V    +++Y 
Sbjct: 210 DL--INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYS 267

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG ++ A ++F    + +++++ A+I+G+  +G+ E  L L   +   G      T   
Sbjct: 268 KCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVS 327

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            +     L    + Y  H   +K        V TA+  +YS L EI  A+K   E     
Sbjct: 328 LVPVSGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE-SPEK 383

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           S  SWNA I+G+ +N  TE+AI  F +M  ++ + +  T + IL AC+ L +L+  + +H
Sbjct: 384 SLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVH 443

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             +  + FES+++V ++LI  Y KCGS  +A R+F  +   + V+WN+MI  Y  +G  +
Sbjct: 444 DLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQ 503

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ +F +M+  GI PT  TFL VL ACSH+GLV++G ++F SM+  YG  P   HY+C+
Sbjct: 504 EALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACV 563

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           VD+LGRAG L+ AL FI  +PI+P   +W  L  ACR H D  +A  +S+++ ELDPD+ 
Sbjct: 564 VDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNV 623

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             +V LSN+++       A   R+  K ++++K PG + IE+    + F S ++SH ++ 
Sbjct: 624 GYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVK 683

Query: 685 KVYEKLKQLMQQIEDIGHT--------DNEKEDRVL---YHSERLAVGFGLIS 726
            ++EKL++L  ++ + G+         D E+E+R L    HSERLA+ FGLI+
Sbjct: 684 AIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIA 736



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 184/364 (50%), Gaps = 9/364 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++++L   +  + L LG + H+L TKT      +V    +++Y+KCG IK    +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTL 278

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            ++    DI + N ++ GY  N   + + S F  L L G  ++ +  T  +++ + G L 
Sbjct: 279 FREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSS--TLVSLVPVSGHLM 336

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            I     +H  ++K  +LS T+VS AL T+Y K   +E A  +F+   ++++ SW A+I+
Sbjct: 337 LI---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ Q+G  E  + L   M+     PN  T T  L++CA L    +G   H  V       
Sbjct: 394 GYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +V TA++ MY+  G I EA++    M K  + V+WN  I+G+  +   +EA+  FS+M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDFMPKK-NEVTWNTMISGYGLHGHGQEALTIFSEM 512

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           + +  A    T+  +L ACS    +   ++I +S I +  FE +V   + +++   + G 
Sbjct: 513 LNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGH 572

Query: 472 WEDA 475
            + A
Sbjct: 573 LQRA 576



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 183/409 (44%), Gaps = 6/409 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I       D  +   L    +  G I     +   +   D+   N L+ G++ N   
Sbjct: 40  HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 200 DQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
             + + F  L    D++PN  TY+  ++          G  +H Q +     S+  + + 
Sbjct: 100 HSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSN 159

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDP 317
           ++ MY K   +EDA  VF+ + +++ I W  +I+G++++  Y + +++   L+ E     
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +  T    L + A L+   +G   H+   K G    D+V T  + +YS  G+I  A    
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLF 279

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           +E  +    V++NA I G+  N +TE ++  F +++ + A     T  S++        L
Sbjct: 280 REF-RRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSG---HL 335

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
                IH   +KS F S+  V ++L   Y+K    E A ++F +     + SWN+MI  Y
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +QNG    AI LF +M      P   T   +LSAC+  G +  G+ V +
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHD 444



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 111/238 (46%), Gaps = 4/238 (1%)

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HAQ++  G      + T +    S LG I+ A+     + +    + +N  + GF  N+ 
Sbjct: 40  HAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFL-FNVLMRGFSVNES 98

Query: 402 TEEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
              ++  F+ + ++ D   +  TY+  + A S          IH + +    +S + +GS
Sbjct: 99  PHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGS 158

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IR 519
           ++++ Y K    EDA +VF ++   D + WN+MI  Y +N    ++I +F  ++ E   R
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              +T L +L A +    ++ G ++  S+  + G    +   +  + L  + GK+++A
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQI-HSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 28/288 (9%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA +LF++SP+++ L + + + +GY    + G++ +  S   +     F      N V +
Sbjct: 372 SARKLFDESPEKS-LPSWNAMISGYT---QNGLTEDAISLFREMQNSEF----SPNPVTI 423

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           TC              +LS C++   L LG+  H L+  T      +V+ +L+ MYAKCG
Sbjct: 424 TC--------------ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            I     +   MP  +  + N +++GY  +    +A + F ++    + P   T+  +L 
Sbjct: 470 SIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLY 529

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRN 283
            C     + EG ++   +M  +Y  + +V +   ++ +  + G ++ A    E + +Q  
Sbjct: 530 ACSHAGLVKEGDEIF-NSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPG 588

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
              W  ++   + H D      +   + E  +DP+   + V L++  S
Sbjct: 589 PSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLSNIHS 634


>gi|147799187|emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 188/542 (34%), Positives = 298/542 (54%), Gaps = 6/542 (1%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAID 235
           MP  D  S N  ++G   N   +  F  F +L   GI  Q +  T +T+L  C       
Sbjct: 1   MPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGI-YQFDQATLTTVLTACDKPEFCY 59

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             K +H+      Y  +  V NAL+T Y +CG       VF+ + ++NV++WTA+I+G  
Sbjct: 60  VSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLS 119

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q   YE+ L+L   MR+  +DPN  T+  +L +C+ L+    G   H  V K G+     
Sbjct: 120 QGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLC 179

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + +A++DMYS  G + +A K + E  +    VS    + G  +N   EE+I+ F +MV+N
Sbjct: 180 IESALMDMYSKCGSLEDAWK-IFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKN 238

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D    S+IL    +  SLA  +QIHS I+K  F SN  V + LI  Y+KCG  +D+
Sbjct: 239 GVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDS 298

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            ++F  +   + VSWNSMI A++++G   +A+ L+E+M +EG+ PT+ TFL++L AC+H 
Sbjct: 299 IKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHV 358

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV+ G    ESM K+YGI P   HY+C+VD++GRAG L  A  FI  LP KP   +W+ 
Sbjct: 359 GLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQA 418

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC  H + +M ++ + Q+    P+  A Y+ L+N+Y+  G   +     K MK   +
Sbjct: 419 LLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGV 478

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHS 715
           +KE G SWIE+  +I+ F  +++ H     +Y  L +L + + D G+  +++   +LY+ 
Sbjct: 479 TKETGISWIEIEKQIHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKR--FILYYL 536

Query: 716 ER 717
           ++
Sbjct: 537 DQ 538



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 160/320 (50%), Gaps = 5/320 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D+  +  VL+ C + E   + +  H+L+       +  V  +L+  Y +CG   S   V
Sbjct: 40  FDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRV 99

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M   ++ +   +++G ++   ++++   F K+    V PN  TY + L  C  L AI
Sbjct: 100 FDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMACSGLQAI 159

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EG+Q+H    KL       + +AL+ MY KCG +EDA  +FE   + + +S T I+ G 
Sbjct: 160 REGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMTVILVGL 219

Query: 295 KQHGDYEKPLRLVCLMREDG--IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            Q+G  E+ +++   M ++G  IDPN  +  + +    +  +  +G   H+ +IK+    
Sbjct: 220 AQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDT--SLALGKQIHSLIIKKSFGS 277

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FV   +++MYS  G++ ++ K    M +  +SVSWN+ IA F R+     A++ + +M
Sbjct: 278 NYFVNNGLINMYSKCGDLDDSIKIFCWMPQR-NSVSWNSMIAAFARHGNGSRALQLYEEM 336

Query: 413 VRNDAACDEFTYSSILKACS 432
                   + T+ S+L AC+
Sbjct: 337 RLEGVWPTDVTFLSLLHACA 356



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 144/279 (51%), Gaps = 15/279 (5%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  CS  + +  GR+ H L+ K  V  D  + ++L++MY+KCG ++    + +    +D 
Sbjct: 150 LMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDE 209

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            S   +L G A+N   +++   F+K+  +G+ + PN    S +L + G  +++  GKQ+H
Sbjct: 210 VSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPN--MISAILGVFGIDTSLALGKQIH 267

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           +  +K  + S   V+N L+ MY KCG ++D+  +F  + QRN +SW ++I  F +HG+  
Sbjct: 268 SLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGS 327

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG---- 357
           + L+L   MR +G+ P + TF   L +CA     H+G +         MA    +G    
Sbjct: 328 RALQLYEEMRLEGVWPTDVTFLSLLHACA-----HVGLVEKGMGFLESMAKDYGIGPRME 382

Query: 358 --TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
               +VDM    G + EAKK ++ + +    + W A + 
Sbjct: 383 HYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLG 421



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 97/193 (50%), Gaps = 8/193 (4%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           ++D   +  +L     +  L LG++ H+LI K +   + FV   L+NMY+KCGD+   + 
Sbjct: 241 VIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIK 300

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSL 231
           +   MP  +  S N ++A +A++    +A   +  ++L+G  V P   T+ ++L  C  +
Sbjct: 301 IFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEEMRLEG--VWPTDVTFLSLLHACAHV 358

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVISWT 288
             +++G     ++M   Y     + +   ++ M  + G++ +A+   E L ++  ++ W 
Sbjct: 359 GLVEKGMGF-LESMAKDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQ 417

Query: 289 AIINGFKQHGDYE 301
           A++     HG+ E
Sbjct: 418 ALLGACSIHGNSE 430


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 207/603 (34%), Positives = 328/603 (54%), Gaps = 41/603 (6%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA-------LFDQAFSF 205
           F   +L+N YAK   I     V  ++P  DI S N L+A YA          LF++    
Sbjct: 76  FSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVREL 135

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMY 263
            L LDG       +T S ++  CG     D G  +QLH   +   +    +V+NA+L  Y
Sbjct: 136 RLGLDG-------FTLSGVITACGD----DVGLVRQLHCFVVVCGHDCYASVNNAVLACY 184

Query: 264 IKCGMMEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            + G + +A  VF  + +   R+ +SW A+I    QH +  + + L   M   G+  + +
Sbjct: 185 SRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL-GEIWEAKKQLKE 379
           T    L +   +++   G  FH  +IK G      VG+ ++D+YS   G + E +K  +E
Sbjct: 245 TMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEE 304

Query: 380 MGKSASSVSWNAQIAGF-FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +  +   V WN  I+GF      +E+ +  F +M RN    D+ ++  +  ACS L S +
Sbjct: 305 I-TAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPS 363

Query: 439 TCEQIHSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
             +Q+H+  +KS    N V V ++L+  Y+KCG+  DA RVF  +   + VS NSMI  Y
Sbjct: 364 LGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGY 423

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +Q+G   +++ LFE M+ + I P + TF+AVLSAC H+G V++GQK F  M + + I PE
Sbjct: 424 AQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPE 483

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HYSCM+DLLGRAGKL+ A   I  +P  P +  W  L  ACR H ++++A   + + L
Sbjct: 484 AEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
            L+P +AA YV LSNMYA A    +A   ++LM+ + + K+PGCSWIE+  K++ F +++
Sbjct: 544 RLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAED 603

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHT--------------DNEKEDRVLYHSERLAVGFG 723
            SH  + +++  + +++++++  G+                +E+E R+LYHSE+LAV FG
Sbjct: 604 TSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFG 663

Query: 724 LIS 726
           LIS
Sbjct: 664 LIS 666



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 169/366 (46%), Gaps = 37/366 (10%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+  +L  C +   +  GK LHA   K      T +SN    +Y KCG + +A++ F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 280 VQRNVISWTAIINGFKQH-------------------------------GDYEKPLRLVC 308
              NV S+  +IN + +H                               G+    LRL  
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            +RE  +  + +T +  + +C    +  +    H  V+  G      V  A++  YS  G
Sbjct: 131 EVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 369 EIWEAKKQLKEMGKSAS--SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            + EA++  +EMG+      VSWNA I    ++++  EA+  F +MVR     D FT +S
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC-GSWEDAERVFSQLTAA 485
           +L A + +  L    Q H  ++KS F  N HVGS LI+ Y+KC GS  +  +VF ++TA 
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP 308

Query: 486 DVVSWNSMIKAYS-QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           D+V WN+MI  +S     +   +  F +M   G RP + +F+ V SACS+      G++V
Sbjct: 309 DLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQV 368

Query: 545 FESMVK 550
               +K
Sbjct: 369 HALAIK 374



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 147/283 (51%), Gaps = 4/283 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           GR++H ++ K+   G+  V + L+++Y+KC G +     V +++   D+   N +++G++
Sbjct: 262 GRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFS 321

Query: 195 -KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSK 252
               L +     F ++     +P+  ++  + + C +LS+   GKQ+HA  +K     ++
Sbjct: 322 LYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNR 381

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
            +V+NAL+ MY KCG + DA  VF+ + + N +S  ++I G+ QHG   + LRL  LM E
Sbjct: 382 VSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLE 441

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIW 371
             I PN  TF   L++C        G  +   + +R     +    + ++D+    G++ 
Sbjct: 442 KDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLK 501

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           EA++ ++ M  +  S+ W   +    ++   E A++A ++ +R
Sbjct: 502 EAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLR 544



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAV 174
           D  FV  V S CS      LG++ HAL  K+ V  ++  V  +LV MY+KCG++     V
Sbjct: 346 DCSFVC-VTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRV 404

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              MP  +  S N ++AGYA++ +  ++   F  +   D+ PN  T+  +L+ C     +
Sbjct: 405 FDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKV 464

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG Q +   MK ++  +    +   ++ +  + G +++AE + E +      I W  ++
Sbjct: 465 EEG-QKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLL 523

Query: 292 NGFKQHGDYE 301
              ++HG+ E
Sbjct: 524 GACRKHGNVE 533


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 185/568 (32%), Positives = 322/568 (56%), Gaps = 27/568 (4%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S N ++A  A++    +A   F  +  + ++PN  T+   +  C +L  +  G+Q H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q +   +     VS+AL+ MY KCG + DA ++F+ +  RN++SWT++I G+ Q+ D  
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 302 KPLRLV--CLMREDG--------IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           + L L    L+ E G        +DP        L++C+ +    +    H  +IKRG  
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDP--IAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293

Query: 352 LGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
            GD  V   ++D Y+  GE+  +++    M +    +SWN+ IA + +N  + E++E F 
Sbjct: 294 -GDLGVENTLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIAVYAQNGMSTESMEIFH 351

Query: 411 QMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           +MV++ +   +  T S++L AC+   S    + IH +++K   ESNV VG+S+I+ Y KC
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A + F ++   +V SW++M+  Y  +G A++A+ +F +M + G++P   TF++VL
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH+GL+++G   F++M  E+ + P   HY CMVDLLGRAG L+ A   I  + ++P 
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPD 531

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L  ACR H ++ + E  ++++ ELDP +   YV LSN+YA+AG   D E  R L
Sbjct: 532 FVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRIL 591

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           MK   + K PG S +++  +++ F   ++ H +  K+YE L++L  +++++G+  +    
Sbjct: 592 MKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSV 651

Query: 706 -------EKEDRVLYHSERLAVGFGLIS 726
                  EKE  +  HSE+LAV FG+++
Sbjct: 652 LHDVGHEEKEMVLRVHSEKLAVAFGIMN 679



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 160/316 (50%), Gaps = 12/316 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS    L  GR+ H          D FV+++LV+MY+KCG+++    +  ++ + +I S 
Sbjct: 162 CSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 221

Query: 187 NCLLAGYAKNALFDQAFSFFLKL---------DGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             ++ GY +N    +A   F +          DG +V  +     ++L+ C  +S     
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDG-EVCVDPIAMVSVLSACSRVSEKSIT 280

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + +H   +K  +     V N L+  Y KCG +  +  VF+G+ +R+VISW +II  + Q+
Sbjct: 281 EGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQN 340

Query: 298 GDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G   + + +   M +DG I+ N  T +  L +CA   +  +G   H QVIK G+    FV
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           GT+I+DMY   G++  A+K    M +  +  SW+A +AG+  +   +EA+E F +M    
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRM-REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 459

Query: 417 AACDEFTYSSILKACS 432
              +  T+ S+L ACS
Sbjct: 460 VKPNYITFVSVLAACS 475



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 14/291 (4%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E  +D   ++ VLS CSR     +    H  + K    GD  V  +L++ YAKCG++   
Sbjct: 256 EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVS 315

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICG 229
             V   M   D+ S N ++A YA+N +  ++   F ++  DG ++  N  T S +L  C 
Sbjct: 316 RRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDG-EINYNAVTLSAVLLACA 374

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
              +   GK +H Q +K+   S   V  +++ MY KCG +E A   F+ + ++NV SW+A
Sbjct: 375 HSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSA 434

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHA 343
           ++ G+  HG  ++ L +   M   G+ PN  TF   LA+C     SH G +      F A
Sbjct: 435 MVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAAC-----SHAGLLEEGWHWFKA 489

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              +  +  G      +VD+    G + EA   +K M      V W A + 
Sbjct: 490 MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 540



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 80  SRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRY 139
           ++NG ST +       + DG  N   VT  +            VL  C+      LG+  
Sbjct: 338 AQNGMSTESMEIFHRMVKDGEINYNAVTLSA------------VLLACAHSGSQRLGKCI 385

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K  +  + FV  S+++MY KCG ++       +M   ++ S + ++AGY  +   
Sbjct: 386 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHA 445

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN-- 257
            +A   F +++   V+PN+ T+ ++LA C     ++EG     + M  ++  +  V +  
Sbjct: 446 KEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF-KAMSHEFDVEPGVEHYG 504

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQH 297
            ++ +  + G +++A  + +G+  R + + W A++   + H
Sbjct: 505 CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 211/668 (31%), Positives = 342/668 (51%), Gaps = 92/668 (13%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMP-YL-DIASCNCLLAGYAKNALFDQAFSFFLK 208
           D     +L+  Y   G+++    +    P Y+ D    N ++ GYA N     A   F  
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 209 LDGIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIK- 265
           +   D +P+ +T++++L A+   +    +  Q+H   +K       ++V NALL++Y+K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 266 -------CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD------------------- 299
                  C  M  A  +F+ + +R+ ++WT +I G+ ++ D                   
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 300 ------------YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
                       +++ L L   MR  GI  ++ T+T  +++CA++ +  MG   HA ++K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317

Query: 348 RGM----ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +    +    V  A++ +Y    ++ EA+K    M    + ++WNA ++G+    + E
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM-PVRNIITWNAILSGYVNAGRME 376

Query: 404 EAIEAFSQM------------------------------VRNDA--ACDEFTYSSILKAC 431
           EA   F +M                              +R D    CD F ++  L AC
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCD-FAFAGALTAC 435

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S+L +L    Q+H+++V   +ES++ VG+++I  Y KCG  E AE VF  + + D+VSWN
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           SMI A  Q+G   KAI LF++M+ EG+ P   TFL VL+ACSH+GLV+ G+  F SM++ 
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P E HY+ MVDL  RAG    A I I ++P KP AP+W  L A CR H ++ +   
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            ++Q+ +L P +   YV LSN+YA+ G   D  + RKLM+ + + KEP CSWIEV NK++
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVH 675

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAV 720
            F   +  H E+  VY  L+QL  +++ +G+  +           +KE  +  HSE+LAV
Sbjct: 676 VFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAV 735

Query: 721 GFGLISLP 728
           GFG++ LP
Sbjct: 736 GFGIMKLP 743



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 65/431 (15%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP-------DGFI 96
           A  SA +LF++ PKR  L+ + +I  GY+  ++   +R  +    ++          G++
Sbjct: 207 AMVSARKLFDEMPKRDELTWTTMI-TGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265

Query: 97  DDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
             GC       C  +  L    D      ++S C+     ++G++ HA I K  +  +  
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHS 325

Query: 154 ----VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--- 206
               V+ +L+ +Y K   +     +   MP  +I + N +L+GY      ++A SFF   
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385

Query: 207 ------------------------------LKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                                         ++LDG   +P  + ++  L  C  L A++ 
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGF--EPCDFAFAGALTACSVLGALEN 443

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+QLHAQ + L Y S  +V NA+++MY KCG++E AESVF  +   +++SW ++I    Q
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGM 350
           HG   K + L   M ++G+ P+  TF   L +C     SH G      + F++ +   G+
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTAC-----SHAGLVEKGRHYFNSMLESYGI 558

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA-- 408
              +     +VD++   G    A+  +  M     +  W A +AG   +   +  IEA  
Sbjct: 559 TPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAE 618

Query: 409 --FSQMVRNDA 417
             F  M +ND 
Sbjct: 619 QLFKLMPQNDG 629



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/504 (22%), Positives = 209/504 (41%), Gaps = 86/504 (17%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P  +  + +L +    S +   +QL  +      +++T     L+T Y   G +E    
Sbjct: 45  KPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTT----LITAYCALGNLELGRE 100

Query: 275 VFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA-S 331
           +F G  L  R+ + + A+I G+  +GD    L L   MR D   P+++TFT  L++    
Sbjct: 101 IFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSALVLF 160

Query: 332 LRNSHMGYMFHAQVIKRGMA-LGDFVGTAIVDMY----SGLG----EIWEAKKQLKEMGK 382
           + N       H  V+K GM  +   V  A++ +Y    S LG     +  A+K   EM K
Sbjct: 161 VGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPK 220

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC----------------------- 419
               ++W   I G+ RN     A E F  MV N  A                        
Sbjct: 221 R-DELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRK 279

Query: 420 --------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN----VHVGSSLIEAYN 467
                   D+ TY++I+ AC+ + S    +Q+H+ I+K++   N    + V ++LI  Y 
Sbjct: 280 MRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYC 339

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAY------------------------------ 497
           K    ++A ++F  +   ++++WN+++  Y                              
Sbjct: 340 KNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISG 399

Query: 498 -SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            +QNG   + + LF++M ++G  P +  F   L+ACS  G +++G+++   +V   G   
Sbjct: 400 LAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGYES 458

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS-DLKMAEFISKQ 615
             +  + M+ +  + G +E A      +P       W  + AA   H   +K  E   + 
Sbjct: 459 SLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVS-WNSMIAALGQHGHGVKAIELFDQM 517

Query: 616 ILELDPDDAAVYVTLSNMYAEAGL 639
           + E    D   ++T+    + AGL
Sbjct: 518 LKEGVFPDRITFLTVLTACSHAGL 541


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 198/635 (31%), Positives = 325/635 (51%), Gaps = 32/635 (5%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F ++  S  +   C   GR  H       +  D FV+ +L++MY KC  +     +   M
Sbjct: 130 FALKACSALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  D+ + N +LAGYA + ++  A +  L  ++    ++PN  T   +L +     A+ +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 237 GKQLHA----------QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
           G  +HA          +  K +      +  ALL MY KCG +  A  VF+ +  RN ++
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHA 343
           W+A+I GF       +   L   M   G+    P   +   AL +CASL +  MG   HA
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHA 364

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            + K G+      G +++ MY+  G I +A     EM     +VS++A ++G+ +N + E
Sbjct: 365 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAE 423

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA   F +M   +   D  T  S++ ACS L +L      H  ++     S   + ++LI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF+ + + D+VSWN+MI  Y  +G  ++A  LF +M   G  P   
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +LSACSHSGLV +G+  F  M   YG+ P   HY CMVDLL R G L+ A  FI +
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P++    +W  L  ACR + ++ + + +S+ I EL P+    +V LSN+Y+ AG   +A
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E R + K++   K PGCSWIE+   ++ F   ++SH + P++Y +L  ++  I+ +G+ 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 704 DNEK-----------EDRVLYHSERLAVGFGLISL 727
            +             E  ++ HSE+LA+ +G++SL
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSL 758



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 237/501 (47%), Gaps = 19/501 (3%)

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA--FSFFLKLDGIDVQPNHYTYST 223
           G +     +  Q+P  D+ + N L+  Y+ ++    A     + ++    V PN+YT+  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L  C +L+    G+ +H   +     +   VS ALL MY+KC  + DA  +F  +  R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 284 VISWTAIINGFKQHGDYEKPLR--LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           +++W A++ G+  HG Y   +   L   M+   + PN  T    L   A       G   
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 342 HAQVI----------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           HA  I          K  +  G  +GTA++DMY+  G +  A++    M  + + V+W+A
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSA 309

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
            I GF    +  +A   F  M+          + +S L+AC+ L  L   EQ+H+ + KS
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              +++  G+SL+  Y K G  + A  +F ++   D VS+++++  Y QNGRA +A ++F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +KM    + P  +T ++++ ACSH   +Q G+    S++   G+  E +  + ++D+  +
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAK 488

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVT 629
            G+++++    + +P +     W  + A    H   K A  +  ++  L  P D   ++ 
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 630 LSNMYAEAGLQADAEEQRKLM 650
           L +  + +GL  + +    +M
Sbjct: 548 LLSACSHSGLVIEGKHWFHVM 568



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  CS    L+ GR  H  +    +  +  +  +L++MYAKCG I     V 
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  DI S N ++AGY  + L  +A + FL+++ +   P+  T+  +L+ C     + 
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EGK   H          +      ++ +  + G +++A    + +  R +V  W A++  
Sbjct: 560 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619

Query: 294 FKQHGDYEKPLRLVCLMREDG 314
            + + + +   ++  +++E G
Sbjct: 620 CRVYKNIDLGKKVSRMIQELG 640


>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 181/518 (34%), Positives = 292/518 (56%), Gaps = 3/518 (0%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           ++AGY        A+  F ++   ++ PN +T S++L  C  +  +  G+ +H   +K  
Sbjct: 64  MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123

Query: 249 YLSKTAVSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
                 V NAL+ MY  C + M+DA  VF G+  +N +SWT +I G+    D    LR+ 
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             M  + ++ N ++F++A+ +C S+ +   G   HA V K G      V  +I+DMY   
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
               EA +   EM +    ++WN  IAG+ R+  TE ++  FS M     + + FT++SI
Sbjct: 244 SCFSEANRYFYEMNQR-DLITWNTLIAGYERSNPTE-SLYVFSMMESEGFSPNCFTFTSI 301

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + AC+ L  L   +QIH RI++   + N+ + ++LI+ Y+KCG+  D+ +VF  ++  D+
Sbjct: 302 MAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDL 361

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSW +M+  Y  +G   +A+ LF+KMV  GIRP    F+A+LSACSH+GLV +G + F+ 
Sbjct: 362 VSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKL 421

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           MV +Y I P++  Y C+VDLLGRAGK+E A   I ++P KP   +W P   AC+ H+   
Sbjct: 422 MVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPN 481

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           + +  + +IL+L P  A  YV LSN+YA  G   +    RKLMK     KE G SW+EV 
Sbjct: 482 LGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVG 541

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           N +Y F   ++  S++  +Y+ L+ L+  +++ G+  +
Sbjct: 542 NHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYVPD 579



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 161/323 (49%), Gaps = 4/323 (1%)

Query: 112 ESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIK 169
           E L    F I  VL  C   +CL  GR  H L  K  + G  +V  +L++MYA C   + 
Sbjct: 87  EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 146

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               V + +   +  S   L+AGY            F ++   +V+ N +++S  +  C 
Sbjct: 147 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 206

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+ +   G+QLHA   K  + S   V N++L MY +C    +A   F  + QR++I+W  
Sbjct: 207 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 266

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+++    E  L +  +M  +G  PN +TFT  +A+CA+L   + G   H ++I+RG
Sbjct: 267 LIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 325

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     +  A++DMYS  G I ++ +    M +    VSW A + G+  +   EEA+E F
Sbjct: 326 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRR-DLVSWTAMMIGYGTHGYGEEAVELF 384

Query: 410 SQMVRNDAACDEFTYSSILKACS 432
            +MVR+    D   + +IL ACS
Sbjct: 385 DKMVRSGIRPDRVVFMAILSACS 407



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 175/380 (46%), Gaps = 4/380 (1%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A ++ +    + +I    +I G+    ++     + C M  + +DPN +T +  L +C  
Sbjct: 46  ATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKG 105

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           ++    G + H   IK G+    +V  A++DMY+      +    +       + VSW  
Sbjct: 106 MKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTT 165

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            IAG+         +  F QM+  +   + F++S  ++AC+ + S    EQ+H+ + K  
Sbjct: 166 LIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHG 225

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           FESN+ V +S+++ Y +C  + +A R F ++   D+++WN++I  Y ++    +++ +F 
Sbjct: 226 FESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERS-NPTESLYVFS 284

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M  EG  P   TF ++++AC+    +  GQ++   +++  G+    A  + ++D+  + 
Sbjct: 285 MMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR-GLDGNLALSNALIDMYSKC 343

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTL 630
           G +  +      +  +     W  +      H   + A E   K +      D  V++ +
Sbjct: 344 GNIADSHQVFGGMSRRDLVS-WTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAI 402

Query: 631 SNMYAEAGLQADAEEQRKLM 650
            +  + AGL  +     KLM
Sbjct: 403 LSACSHAGLVDEGLRYFKLM 422



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/300 (19%), Positives = 120/300 (40%), Gaps = 41/300 (13%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+    L  G++ H  I +  + G+  ++ +L++MY+KCG+I     V   M   D
Sbjct: 301 IMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRD 360

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++ GY  +   ++A   F K+    ++P+   +  +L+ C     +DEG +   
Sbjct: 361 LVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFK 420

Query: 243 QTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             +    +S    +   ++ +  + G +E+A  + E +                      
Sbjct: 421 LMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM---------------------- 458

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAI 360
            P +           P+E  +   L +C +    ++G +   +++  R    G +V  + 
Sbjct: 459 -PFK-----------PDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSN 506

Query: 361 VDMYSG-LGEIWEAKKQLKEMG-KSASSVSW---NAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +    G  GE    +K +K MG K  +  SW      +  F    +    IE   Q++ N
Sbjct: 507 IYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLEN 566


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 189/536 (35%), Positives = 290/536 (54%), Gaps = 8/536 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GRR H  + K A  GD FV  +LV+MYAK GD+K+   V  ++P  ++ S   +L+G  +
Sbjct: 147 GRRLHCDVVK-AGGGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQ 205

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N L  +    F ++    + P+ YT +++L  C  L ++ +G+ +H   MK   +S   +
Sbjct: 206 NGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFI 265

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG- 314
           + A+L MY+KCG  EDA  VF+ L   +++ WT +I G+ Q+G    PL  + L  +D  
Sbjct: 266 TAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNG---SPLDALLLFVDDKF 322

Query: 315 --IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             I PN  T    L++ A LRN  +G   H   +K G    D V  A+VDMY+    + +
Sbjct: 323 MRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSD 382

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           AK     +  +   V+WN+ IAG+  N    +A+  FS M    +  D  +  + L AC 
Sbjct: 383 AKGIFGRV-LNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACV 441

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L  L   +  H+  VK  F SN++V ++L+  YNKC     A+RVFS++   + V+W +
Sbjct: 442 CLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGA 501

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y   G +  +I LF +M+ + I+P  + F ++LS CSH+G+V  G+K FESM   +
Sbjct: 502 MIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYF 561

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            I P   HY+CMVD+L RAG LE AL FI  +P++    IW+     C+ HS L+ AE  
Sbjct: 562 NITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEA 621

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
             +++ L PD     V +SN+Y   G    +   RKLMK + + K PGCS + + N
Sbjct: 622 VNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSVGLEN 677



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 217/458 (47%), Gaps = 28/458 (6%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           ES+L  ++ +  VL  C+    L  GR  H  + K  +  + F+TA++++MY KCG+ + 
Sbjct: 222 ESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAED 281

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V  ++ ++D+     ++ GY +N     A   F+    + + PN  T +T+L+    
Sbjct: 282 ARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQ 341

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  +  G+ +H  ++KL  +    V NAL+ MY KC  + DA+ +F  ++ ++V++W ++
Sbjct: 342 LRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSL 401

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ ++      L L   MR  G  P+  +   AL++C  L +  +G  FH   +K   
Sbjct: 402 IAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAF 461

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               +V TA++++Y+   ++  A++   EM    ++V+W A I G+     +  +I+ F+
Sbjct: 462 MSNIYVNTALLNLYNKCADLPSAQRVFSEMNDR-NTVTWGAMIGGYGMQGDSAGSIDLFN 520

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV---KSKFESNVHVG-------- 459
           +M++++   +E  ++SIL  CS           H+ +V   K  FES  H          
Sbjct: 521 EMLKDNIQPNEAVFTSILSTCS-----------HTGMVTVGKKCFESMAHYFNITPSMKH 569

Query: 460 -SSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
            + +++   + G+ E+A     ++   AD   W + +     + R   A     +M+V  
Sbjct: 570 YACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMV-- 627

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           + P    F  ++S    S    D       ++KE G++
Sbjct: 628 LHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLV 665



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 14/403 (3%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  HA +    +         L++ YA  GD+ S   V+ + P+ D  +    L  +A  
Sbjct: 45  RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAA 104

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID--EGKQLHAQTMKLQYLSKTA 254
               +A +    +               LA+  ++ + D   G++LH   +K        
Sbjct: 105 GRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGG-GDLF 163

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N L+ MY K G +++A  VF+ +  RNV+SWT++++G  Q+G  ++ L L   MR++ 
Sbjct: 164 VMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQES 223

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I P+EYT    L +C  L + H G + H  V+K G+    F+  A++DMY   GE  +A+
Sbjct: 224 ILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDAR 283

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI-----EAFSQMVRNDAACDEFTYSSILK 429
           +   E+      V W   I G+ +N    +A+     + F ++V N       T +++L 
Sbjct: 284 QVFDEL-SFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPN-----SVTIATVLS 337

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A + L +L+    IH   VK     N  V ++L++ Y KC +  DA+ +F ++   DVV+
Sbjct: 338 ASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVT 397

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           WNS+I  Y++N     A++LF  M V+G  P   + +  LSAC
Sbjct: 398 WNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSAC 440



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 122/244 (50%), Gaps = 15/244 (6%)

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-----SVSWNAQIAG 395
            HA+++  G+  G    T ++  Y+ LG++  A++ L E     +     ++ W+A  AG
Sbjct: 47  LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAA-AG 105

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDE--FTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
                +  EA+     M R   A  E     S  LKA           ++H  +VK+   
Sbjct: 106 -----RHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-G 159

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            ++ V ++L++ Y K G  ++A +VF ++   +VVSW SM+    QNG A++ ++LF +M
Sbjct: 160 GDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEM 219

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
             E I P+  T  +VL AC+  G +  G+ +  S++K +G++      + M+D+  + G+
Sbjct: 220 RQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMK-HGLVSNHFITAAMLDMYVKCGE 278

Query: 574 LEIA 577
            E A
Sbjct: 279 AEDA 282


>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 185/614 (30%), Positives = 335/614 (54%), Gaps = 7/614 (1%)

Query: 99  GCSNTVPVTCYS--LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA 156
           G   ++P T ++  ++S     F    L   ++   L  G++ HA + K   C    +  
Sbjct: 53  GLRASLPETGFTNLVDSCSTHSFSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQN 112

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA----KNALFDQAFSFFLKLDGI 212
            ++++Y KC +   +  +  +MP  ++ S N L+ G      K AL    F +F ++   
Sbjct: 113 QVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLE 172

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            + PN  T + +L     L+ +   +QLH   +K  + S   V +AL+  Y K G++++A
Sbjct: 173 MMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEA 232

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           +S F+ +  R+++ W  +++ +  +G   K   +  LMR +G+  + +TFT  + SC  L
Sbjct: 233 QSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVL 292

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +  +G   H  +I+    L   V +A+VDMYS    I +A+K    M    + VSW   
Sbjct: 293 GSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM-IVKNIVSWTTM 351

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I G+ ++   +EA+    +M+R     DE   +SIL +C  L + +   Q+H+ +V++ F
Sbjct: 352 IVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGF 411

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E+ + + ++L+ AY+KCGS   A + FS +   D++SW S++ AY+ +G +++ + +FEK
Sbjct: 412 EAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEK 471

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+   +RP    FL VLSAC+H G V +G   F  M+  Y I+P+  HY+C++DLLGRAG
Sbjct: 472 MLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAG 531

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
            L+ A+  ++++P++P +        AC+ H ++ +A + S+++  ++P++ A Y  +SN
Sbjct: 532 FLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSN 591

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MYA  G   D    RKLM+ +   K PGCSW+E+  +++ F S++K+H    +VY  L  
Sbjct: 592 MYASVGHWFDVARVRKLMRERCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGMLDL 651

Query: 693 LMQQIEDIGHTDNE 706
           L++ +E+   +D E
Sbjct: 652 LVRLMEEDDVSDME 665


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 196/584 (33%), Positives = 317/584 (54%), Gaps = 42/584 (7%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTM---LAICGSLSAIDEGKQLHAQTMKLQYL 250
           A    F  A S FL++    V P     +++   L  C  L        LHA  ++    
Sbjct: 23  ASQGQFLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSF 81

Query: 251 SKTAVSNALLTMYIKC---------------GMMEDA-----ESVFEGLVQRNVISWTAI 290
           +    +NALL + IK                G +E A       VF+ +++R+ +SW  +
Sbjct: 82  ADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTL 141

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL---ASCASLRNSHMGYMFHAQVIK 347
           I G  +H  +++ L +V  M  DG  P+ +T +  L   A CA ++    G + H   IK
Sbjct: 142 ILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR---GMVVHGYAIK 198

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G     FVG++++DMY+   ++  + K          +V WN+ +AG+ +N   EEA+ 
Sbjct: 199 NGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSF-SDCDAVLWNSMLAGYAQNGSVEEALG 257

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +M++        T+SS++ A   L  L   +Q+H+ +++++F  N+ + SSLI+ Y 
Sbjct: 258 IFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYC 317

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG+ + A RVF+ + + D+VSW +MI  Y+ +G   +A +LFE+M +  ++P + TFLA
Sbjct: 318 KCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLA 377

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL+ACSH+GLV +G K F SM  +YG +P   H + + D LGRAG L+ A  FIS + IK
Sbjct: 378 VLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIK 437

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
           PT+ +W  L  ACR H +  +AE ++K+I EL+P     +V LSNMY+ +G   +A + R
Sbjct: 438 PTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLR 497

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL----KQLMQQ-----IE 698
           K M++K + KEP CSWIEV NK++ F + +KSH    ++ + L    +Q+++Q     +E
Sbjct: 498 KSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPNME 557

Query: 699 DIGHTDNEKEDRVLY--HSERLAVGFGLISLPAKNKFECSRTLE 740
           D+     E++ R +   HSE+LA+ FG+IS P        + L 
Sbjct: 558 DVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLR 601



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 190/433 (43%), Gaps = 65/433 (15%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
           ++F++  +R  +S + LI    +   E    +   S   + + DGF+ D          +
Sbjct: 125 KVFDEMLERDAVSWNTLI----LGCAEHKRHQEALSMVREMWRDGFMPD---------TF 171

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           +L +      V+ + + C+    ++ G   H    K     D FV +SL++MYA C  + 
Sbjct: 172 TLST------VLPIFAECAD---IKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMD 222

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
             + V       D    N +LAGYA+N   ++A   F ++    V+P   T+S+++   G
Sbjct: 223 YSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFG 282

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           +LS +  GKQLHA  ++ ++     +S++L+ MY KCG ++ A  VF G+   +++SWTA
Sbjct: 283 NLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 342

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIK 347
           +I G+  HG   +   L   M    + PN  TF   L +C  A L ++   Y F++   +
Sbjct: 343 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKY-FNSMSNQ 401

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G         A+ D     G++ EA   + EM    +S  W                  
Sbjct: 402 YGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVW------------------ 443

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EA 465
                            S++L+AC +  +    E++  +I + + +S   +GS +I    
Sbjct: 444 -----------------STLLRACRVHKNTVLAEEVAKKIFELEPKS---MGSHVILSNM 483

Query: 466 YNKCGSWEDAERV 478
           Y+  G W +A ++
Sbjct: 484 YSASGRWNEAAQL 496



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 192/453 (42%), Gaps = 59/453 (13%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI--------------- 168
           L  C+      L    HAL  ++    D+F   +L+N+  K                   
Sbjct: 56  LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115

Query: 169 -----KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
                +SM  V  +M   D  S N L+ G A++    +A S   ++      P+ +T ST
Sbjct: 116 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLST 175

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L I    + I  G  +H   +K  + +   V ++L+ MY  C  M+ +  VF+     +
Sbjct: 176 VLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 235

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            + W +++ G+ Q+G  E+ L +   M + G+ P   TF+  + +  +L    +G   HA
Sbjct: 236 AVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHA 295

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +I+       F+ ++++DMY   G +  A++    + +S   VSW A I G+  +  T 
Sbjct: 296 YLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGI-QSPDIVSWTAMIMGYALHGPTT 354

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACS--------------------LLPSLATC--- 440
           EA   F +M   +   +  T+ ++L ACS                     +PSL  C   
Sbjct: 355 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 414

Query: 441 ----------EQIHSRIVKSKFESNVHVGSSLIEA----YNKCGSWEDAERVFSQLTAAD 486
                     ++ ++ I + K +    V S+L+ A     N   + E A+++F +L    
Sbjct: 415 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF-ELEPKS 473

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + S   +   YS +GR  +A  L + M ++G++
Sbjct: 474 MGSHVILSNMYSASGRWNEAAQLRKSMRIKGMK 506


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 183/595 (30%), Positives = 316/595 (53%), Gaps = 48/595 (8%)

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           +   +LF +A + F+++      P+H  + ++L  C  +  +  G+ +H   ++L     
Sbjct: 80  FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139

Query: 253 TAVSNALLTMYIKC-GM-----------------------------------MEDAESVF 276
               NAL+ MY K  GM                                   ++    VF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           E + +++V+S+  II G+ Q G YE  LR+V  M    + P+ +T +  L   +   +  
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H  VI++G+    ++G+++VDMY+    I ++++    +      +SWN+ +AG+
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGY 318

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N +  EA+  F QMV          +SS++ AC+ L +L   +Q+H  +++  F SN+
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            + S+L++ Y+KCG+ + A ++F ++   D VSW ++I  ++ +G   +A+ LFE+M  +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G++P    F+AVL+ACSH GLV +    F SM K YG+  E  HY+ + DLLGRAGKLE 
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A  FIS + ++PT  +W  L ++C  H +L++AE ++++I  +D ++   YV + NMYA 
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
            G   +  + R  M+ K + K+P CSWIE+ NK + F S ++SH  M K+ E LK +M+Q
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618

Query: 697 IEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           +E  G+           D E +  +L+ HSERLAV FG+I+         ++ + 
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 246/591 (41%), Gaps = 99/591 (16%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK----------- 164
           D      VL  C+    L  G   H  I +  +  D +   +L+NMYAK           
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163

Query: 165 ------------CGD-------------IKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
                        GD             I S+  V + MP  D+ S N ++AGYA++ ++
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A     ++   D++P+ +T S++L I      + +GK++H   ++    S   + ++L
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + MY K   +ED+E VF  L  R+ ISW +++ G+ Q+G Y + LRL   M    + P  
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
             F+  + +CA L   H+G   H  V++ G     F+ +A+VDMYS  G I  A+K    
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS------- 432
           M      VSW A I G   +    EA+  F +M R     ++  + ++L ACS       
Sbjct: 404 M-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462

Query: 433 --------------------------LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
                                     LL      E+ ++ I K   E    V S+L+ + 
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522

Query: 467 NKCGSWEDAERVFSQLTAAD---VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP--- 520
           +   + E AE+V  ++   D   + ++  M   Y+ NGR ++   L  +M  +G+R    
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582

Query: 521 ------TNSTFLAVLSACSHSGLVQDGQ---KVFESMVKE------YGILP--EEAHYSC 563
                  N T   V    SH  + +  +    V E M KE       G+L   +E H   
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           +  L G + +L +A   I+  P   T  + + +     CH  +K   FISK
Sbjct: 643 L--LFGHSERLAVAFGIINTEP-GTTIRVTKNIRICTDCHVAIK---FISK 687



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 180/377 (47%), Gaps = 37/377 (9%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           + KQLHAQ ++ Q LS T+ S  ++++Y    ++ +A  +F+ L    V++W ++I  F 
Sbjct: 23  QAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
               + K L     MR  G  P+   F   L SC  + +   G   H  +++ GM    +
Sbjct: 82  DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141

Query: 356 VGTAIVDMYS---GLGEIWEAKKQLKEMGKSASS-------------------------- 386
            G A+++MY+   G+G          EM +  S+                          
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201

Query: 387 ------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                 VS+N  IAG+ ++   E+A+    +M   D   D FT SS+L   S    +   
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           ++IH  +++   +S+V++GSSL++ Y K    ED+ERVFS+L   D +SWNS++  Y QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           GR  +A+ LF +MV   ++P    F +V+ AC+H   +  G+++    V   G       
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLRGGFGSNIFI 380

Query: 561 YSCMVDLLGRAGKLEIA 577
            S +VD+  + G ++ A
Sbjct: 381 ASALVDMYSKCGNIKAA 397


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 201/624 (32%), Positives = 327/624 (52%), Gaps = 26/624 (4%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K        V  +L++ YAK   I+  + V  +MP  DI S N ++ G A N L+
Sbjct: 7   HGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLY 66

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           D+A   F+++     + +  T  +++  C        G  +H  +++   +S+T++ NAL
Sbjct: 67  DKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNAL 126

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY  C        +F  + Q+NV+SWTA+I  + + G ++K   L   M  +GI P+ 
Sbjct: 127 LDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDV 186

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +  T AL + A   +   G   H   I+ G+     V  A+++MY   G + EA+     
Sbjct: 187 FAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDH 246

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV---RNDAACDEFTYSSILKACSLLPS 436
           + K   ++SWN  I G+ R+    EA   F++M+   R +A     T + IL A + L S
Sbjct: 247 VTKK-DTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAV----TMACILPAAASLSS 301

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L    ++H+  V+  +  +  V ++L++ Y KCG+   A R+F  LT  +++SW  MI  
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +GR R AI LFE+M   GI+P   +F A+L ACSHSGL  +G + F +M  E+ I P
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           +  HY+CMVDLL   G L+ A  FI  +PI+P + IW  L   CR H ++K+AE +++ +
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            EL+P++   YV L+N+YAEA       + +  +  + + +  GCSWIEV  K + FF++
Sbjct: 482 FELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAE 541

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL-YHSERLAVGFGLI 725
           N++H +  ++ E L  + +++++ GH           D+   D  L  HS +LAV FG++
Sbjct: 542 NRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVL 601

Query: 726 SLP-------AKNKFECSRTLEYA 742
           +L         KN   CS   E A
Sbjct: 602 NLSQGRPIRVTKNSRVCSHCHEAA 625



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 33/473 (6%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G  +H   +K  + ++ AV NAL++ Y K   +EDA  VF+ + QR++ISW +II G  
Sbjct: 2   DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G Y+K + L   M  +G + +  T    + +C     S +G + H   ++ G+     
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +G A++DMYS   + W +  ++    +  + VSW A I  + R    ++    F +M   
Sbjct: 122 LGNALLDMYSNCSD-WRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D F  +S L A +   SL   + +H   +++  E  + V ++L+E Y KCG  E+A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F  +T  D +SWN++I  YS++  A +A  LF +M+++ +RP   T   +L A +  
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASL 299

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             ++ G+++    V+  G L +    + +VD+  + G L +A      L  K     W  
Sbjct: 300 SSLERGREMHAYAVRR-GYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLIS-WTI 357

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           + A    H   + A                  + L      +G+Q DA     ++     
Sbjct: 358 MIAGYGMHGRGRDA------------------IALFEQMKGSGIQPDAGSFSAILY---- 395

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE 708
                CS   + ++ +RFF+  ++     ++  KLK     ++ + HT N KE
Sbjct: 396 ----ACSHSGLRDEGWRFFNAMRNEH---RIEPKLKHYACMVDLLCHTGNLKE 441



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 201/451 (44%), Gaps = 38/451 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ V+  C +     +G   H    +T +  +  +  +L++MY+ C D +S   +
Sbjct: 83  LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + M   ++ S   ++  Y +   FD+    F ++    ++P+ +  ++ L       ++
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GK +H   ++        V+NAL+ MY+KCG ME+A  +F+ + +++ ISW  +I G+
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +     +   L   M    + PN  T    L + ASL +   G   HA  ++RG    +
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV  A+VDMY   G +  A++ L +M  + + +SW   IAG+  + +  +AI  F QM  
Sbjct: 322 FVANALVDMYVKCGALLLARR-LFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKG 380

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D  ++S+IL ACS           HS +                E +    +  +
Sbjct: 381 SGIQPDAGSFSAILYACS-----------HSGLRD--------------EGWRFFNAMRN 415

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
             R+  +L       +  M+      G  ++A    E M +E   P +S ++++L  C  
Sbjct: 416 EHRIEPKLK-----HYACMVDLLCHTGNLKEAYEFIETMPIE---PDSSIWVSLLRGCRI 467

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
              V+  +KV E MV E  + PE   Y  ++
Sbjct: 468 HRNVKLAEKVAE-MVFE--LEPENTGYYVLL 495



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 4/198 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE GR  HA   +     D FV  +LV+MY KCG +     +   +   ++ S   ++AG
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYLS 251
           Y  +     A + F ++ G  +QP+  ++S +L  C      DEG +  +A   + +   
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           K      ++ +    G +++A    E + ++ +   W +++ G + H + +   ++  ++
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMV 481

Query: 311 REDGIDPNEYTFTVALAS 328
            E  ++P    + V LA+
Sbjct: 482 FE--LEPENTGYYVLLAN 497


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 328/648 (50%), Gaps = 32/648 (4%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F ++  S  +   C   GR  H       +  D FV+ +L++MY KC  +     +   M
Sbjct: 130 FALKACSALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  D+ + N +LAGYA + ++  A +  L  ++    ++PN  T   +L +     A+ +
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 237 GKQLHA----------QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
           G  +HA          +  K +      +  ALL MY KCG +  A  VF+ +  RN ++
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHA 343
           W+A+I GF       +   L   M   G+    P   +   AL +CASL +  MG   HA
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHA 364

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            + K G+      G +++ MY+  G I +A     EM     +VS++A ++G+ +N + E
Sbjct: 365 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAE 423

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA   F +M   +   D  T  S++ ACS L +L      H  ++     S   + ++LI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF+ + + D+VSWN+MI  Y  +G  ++A  LF +M   G  P   
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +LSACSHSGLV +G+  F  M   YG+ P   HY CMVDLL R G L+ A  FI +
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P++    +W  L  ACR + ++ + + +S+ I EL P+    +V LSN+Y+ AG   +A
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E R + K++   K PGCSWIE+   ++ F   ++SH + P++Y +L  ++  I+ +G+ 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 704 DNEK-----------EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +             E  ++ HSE+LA+ +G++SL        ++ L 
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 771



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 238/502 (47%), Gaps = 19/502 (3%)

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA--FSFFLKLDGIDVQPNHYTYST 223
           G +     +  Q+P  D+ + N L+  Y+ ++    A     + ++    V PN+YT+  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L  C +L+    G+ +H   +     +   VS ALL MY+KC  + DA  +F  +  R+
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 284 VISWTAIINGFKQHGDYEKPLR--LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           +++W A++ G+  HG Y   +   L   M+   + PN  T    L   A       G   
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 342 HAQVI----------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           HA  I          K  +  G  +GTA++DMY+  G +  A++    M  + + V+W+A
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM-PARNEVTWSA 309

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
            I GF    +  +A   F  M+          + +S L+AC+ L  L   EQ+H+ + KS
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
              +++  G+SL+  Y K G  + A  +F ++   D VS+++++  Y QNGRA +A ++F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +KM    + P  +T ++++ ACSH   +Q G+    S++   G+  E +  + ++D+  +
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAK 488

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVT 629
            G+++++    + +P +     W  + A    H   K A  +  ++  L  P D   ++ 
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFIC 547

Query: 630 LSNMYAEAGLQADAEEQRKLMK 651
           L +  + +GL  + +    +M+
Sbjct: 548 LLSACSHSGLVIEGKHWFHVMR 569



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  CS    L+ GR  H  +    +  +  +  +L++MYAKCG I     V 
Sbjct: 440 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 499

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  DI S N ++AGY  + L  +A + FL+++ +   P+  T+  +L+ C     + 
Sbjct: 500 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EGK   H          +      ++ +  + G +++A    + +  R +V  W A++  
Sbjct: 560 EGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619

Query: 294 FKQHGDYEKPLRLVCLMREDG 314
            + + + +   ++  +++E G
Sbjct: 620 CRVYKNIDLGKKVSRMIQELG 640


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 328/648 (50%), Gaps = 32/648 (4%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F ++  S  +   C   GR  H       +  D FV+ +L++MY KC  +     +   M
Sbjct: 15  FALKACSALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  D+ + N +LAGYA + ++  A +  L  ++    ++PN  T   +L +     A+ +
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 237 GKQLHA----------QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
           G  +HA          +  K +      +  ALL MY KCG +  A  VF+ +  RN ++
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHA 343
           W+A+I GF       +   L   M   G+    P   +   AL +CASL +  MG   HA
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHA 249

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            + K G+      G +++ MY+  G I +A     EM     +VS++A ++G+ +N + E
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAE 308

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA   F +M   +   D  T  S++ ACS L +L      H  ++     S   + ++LI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF+ + + D+VSWN+MI  Y  +G  ++A  LF +M   G  P   
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +LSACSHSGLV +G+  F  M   YG+ P   HY CMVDLL R G L+ A  FI +
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P++    +W  L  ACR + ++ + + +S+ I EL P+    +V LSN+Y+ AG   +A
Sbjct: 489 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 548

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E R + K++   K PGCSWIE+   ++ F   ++SH + P++Y +L  ++  I+ +G+ 
Sbjct: 549 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 608

Query: 704 DNEK-----------EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +             E  ++ HSE+LA+ +G++SL        ++ L 
Sbjct: 609 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 217/451 (48%), Gaps = 17/451 (3%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V PN+YT+   L  C +L+    G+ +H   +     +   VS ALL MY+KC  + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLR--LVCLMREDGIDPNEYTFTVALASCAS 331
            +F  +  R++++W A++ G+  HG Y   +   L   M+   + PN  T    L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 332 LRNSHMGYMFHAQVI----------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
                 G   HA  I          K  +  G  +GTA++DMY+  G +  A++    M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM- 184

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATC 440
            + + V+W+A I GF    +  +A   F  M+          + +S L+AC+ L  L   
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           EQ+H+ + KS   +++  G+SL+  Y K G  + A  +F ++   D VS+++++  Y QN
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           GRA +A ++F+KM    + P  +T ++++ ACSH   +Q G+    S++   G+  E + 
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSI 363

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + ++D+  + G+++++    + +P +     W  + A    H   K A  +  ++  L 
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 621 -PDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            P D   ++ L +  + +GL  + +    +M
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+R+  A + +T+   LKACS L        IH   + +  ++++ V ++L++ Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI--ILFEKMVVEGIRPTNSTFLAVL 529
             DA  +F+ + A D+V+WN+M+  Y+ +G    A+  +L  +M +  +RP  ST +A+L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 530 SACSHSGLVQDGQKVFESMVK 550
              +  G +  G  V    ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIR 141



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  CS    L+ GR  H  +    +  +  +  +L++MYAKCG I     V 
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  DI S N ++AGY  + L  +A + FL+++ +   P+  T+  +L+ C     + 
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EGK   H          +      ++ +  + G +++A    + +  R +V  W A++  
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504

Query: 294 FKQHGDYEKPLRLVCLMREDG 314
            + + + +   ++  +++E G
Sbjct: 505 CRVYKNIDLGKKVSRMIQELG 525


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 328/648 (50%), Gaps = 32/648 (4%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F ++  S  +   C   GR  H       +  D FV+ +L++MY KC  +     +   M
Sbjct: 15  FALKACSALADHHC---GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  D+ + N +LAGYA + ++  A +  L  ++    ++PN  T   +L +     A+ +
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 237 GKQLHA----------QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
           G  +HA          +  K +      +  ALL MY KCG +  A  VF+ +  RN ++
Sbjct: 132 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 191

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHA 343
           W+A+I GF       +   L   M   G+    P   +   AL +CASL +  MG   HA
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASLDHLRMGEQLHA 249

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            + K G+      G +++ MY+  G I +A     EM     +VS++A ++G+ +N + E
Sbjct: 250 LLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSALVSGYVQNGRAE 308

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA   F +M   +   D  T  S++ ACS L +L      H  ++     S   + ++LI
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  + + +VF+ + + D+VSWN+MI  Y  +G  ++A  LF +M   G  P   
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +LSACSHSGLV +G+  F  M   YG+ P   HY CMVDLL R G L+ A  FI +
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P++    +W  L  ACR + ++ + + +S+ I EL P+    +V LSN+Y+ AG   +A
Sbjct: 489 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 548

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E R + K++   K PGCSWIE+   ++ F   ++SH + P++Y +L  ++  I+ +G+ 
Sbjct: 549 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 608

Query: 704 DNEK-----------EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +             E  ++ HSE+LA+ +G++SL        ++ L 
Sbjct: 609 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLR 656



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 217/451 (48%), Gaps = 17/451 (3%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V PN+YT+   L  C +L+    G+ +H   +     +   VS ALL MY+KC  + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLR--LVCLMREDGIDPNEYTFTVALASCAS 331
            +F  +  R++++W A++ G+  HG Y   +   L   M+   + PN  T    L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 332 LRNSHMGYMFHAQVI----------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
                 G   HA  I          K  +  G  +GTA++DMY+  G +  A++    M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAM- 184

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATC 440
            + + V+W+A I GF    +  +A   F  M+          + +S L+AC+ L  L   
Sbjct: 185 PARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMG 244

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           EQ+H+ + KS   +++  G+SL+  Y K G  + A  +F ++   D VS+++++  Y QN
Sbjct: 245 EQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQN 304

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           GRA +A ++F+KM    + P  +T ++++ ACSH   +Q G+    S++   G+  E + 
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSI 363

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + ++D+  + G+++++    + +P +     W  + A    H   K A  +  ++  L 
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVS-WNTMIAGYGIHGLGKEATALFLEMNNLG 422

Query: 621 -PDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            P D   ++ L +  + +GL  + +    +M
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVM 453



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+R+  A + +T+   LKACS L        IH   + +  ++++ V ++L++ Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI--ILFEKMVVEGIRPTNSTFLAVL 529
             DA  +F+ + A D+V+WN+M+  Y+ +G    A+  +L  +M +  +RP  ST +A+L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 530 SACSHSGLVQDGQKVFESMVK 550
              +  G +  G  V    ++
Sbjct: 121 PLLAQQGALAQGTSVHAYCIR 141



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  CS    L+ GR  H  +    +  +  +  +L++MYAKCG I     V 
Sbjct: 325 DAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVF 384

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  DI S N ++AGY  + L  +A + FL+++ +   P+  T+  +L+ C     + 
Sbjct: 385 NMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EGK   H          +      ++ +  + G +++A    + +  R +V  W A++  
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504

Query: 294 FKQHGDYEKPLRLVCLMREDG 314
            + + + +   ++  +++E G
Sbjct: 505 CRVYKNIDLGKKVSRMIQELG 525


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 189/565 (33%), Positives = 311/565 (55%), Gaps = 21/565 (3%)

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            ++ S N ++A  A+     +A   F  L  + + P   ++   +  C +L  +  G+  H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             Q     + +   VS+AL+ MY KCG ++DA ++F+ +  RNV+SWT++I G+ Q+   +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 302  KPLRLVCLMRE------DG--IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
              L L     E      DG  +  +       L++C+ +    +    H  V+K+G    
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285

Query: 354  DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
              VG  ++D Y+  G+   +KK    M +    +SWN+ IA + ++  + EA+E F  MV
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWM-EEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344

Query: 414  RN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            R+     +  T S++L AC+   +L   + IH +++K   E NV VG+S+I+ Y KCG  
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404

Query: 473  EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            E A++ F ++   +V SW +M+  Y  +GRA++A+ +F KMV  G++P   TF++VL+AC
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464

Query: 533  SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
            SH+GLV++G   F +M  +Y I P   HY CMVDL GRAG L  A   I  + +KP   +
Sbjct: 1465 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 1524

Query: 593  WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            W  L  ACR H ++ + E  ++++ ELDPD+   YV LSN+YA+AG  AD E  R LMK 
Sbjct: 1525 WGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKN 1584

Query: 653  KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------- 705
            +++ K PG S +E+  +++ F   +K H     +Y+ L++L  +++ IG+  N       
Sbjct: 1585 RQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHD 1644

Query: 706  ----EKEDRVLYHSERLAVGFGLIS 726
                EKE  +  HSE+LAV FG+++
Sbjct: 1645 VDEEEKEIILRVHSEKLAVAFGVMN 1669



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 184/372 (49%), Gaps = 32/372 (8%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+HA+ ++    +   ++  L+ +Y   G +  A  +F  +      +W  II     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  E+ L L   M   GI  +++TF   + +C +  +  +G + H  +IK G +   FV 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 358 TAIVDMY----------------------------SGL---GEIWEAKKQLKEMGKSASS 386
             ++D Y                            SGL   G++ EA++   E+  S + 
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI-PSKNV 222

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           VSW A I G+ RNQ+ EEA+E F +M   +   +E+T  S++KAC+ +  L     IH  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +K+  E  V++G++LI+ Y+KCGS +DA  VF  +    + +WNSMI +   +G  ++A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF +M    ++P   TF+ VL AC H   V++G   F  M + YGI P   HY CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 567 LLGRAGKLEIAL 578
           L  R+  L+ A 
Sbjct: 403 LYARSNNLDEAF 414



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 170/368 (46%), Gaps = 34/368 (9%)

Query: 151  DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
            D FV+++L++MY+KCG +K   A+  ++P  ++ S   ++ GY +N   D A   F    
Sbjct: 1176 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 1235

Query: 210  -------DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
                   DG +V  +     ++L+ C  +S     + +H   +K  +     V N L+  
Sbjct: 1236 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 1295

Query: 263  YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
            Y KCG    ++ VF+ + +++ ISW ++I  + Q G   + L +   ++R  G+  N  T
Sbjct: 1296 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 1355

Query: 322  FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
             +  L +CA       G   H QVIK  +     VGT+I+DMY   G +  AKK    M 
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM- 1414

Query: 382  KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
            K  +  SW A +AG+  + + +EA++ F +MVR     +  T+ S+L ACS         
Sbjct: 1415 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS--------- 1465

Query: 442  QIHSRIV------------KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVV 488
              H+ +V            K   E  +     +++ + + G   +A  +  ++    D V
Sbjct: 1466 --HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523

Query: 489  SWNSMIKA 496
             W S++ A
Sbjct: 1524 VWGSLLGA 1531



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 32/326 (9%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA I ++ +  DQ +T  L+++Y+  G I   + +  Q+      + N ++     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            L +QA   +  +    +  + +T+  ++  C +  +ID GK +H   +K  +     V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 257 NALLTMYIKCGM-------------------------------MEDAESVFEGLVQRNVI 285
           N L+  Y KCG                                +++A  +F+ +  +NV+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWTA+ING+ ++   E+ L L   M+ + I PNEYT    + +C  +    +G   H   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           IK  + +G ++GTA++DMYS  G I +A +  + M +  S  +WN+ I     +   +EA
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHGLGQEA 342

Query: 406 IEAFSQMVRNDAACDEFTYSSILKAC 431
           +  FS+M R +   D  T+  +L AC
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCAC 368



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 159/353 (45%), Gaps = 28/353 (7%)

Query: 51   LFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGF-IDDGCSNTVPVTCY 109
            LF++ P R  +S + +I  GY+  E+   + N      D   +   ++DG  N VP    
Sbjct: 1199 LFDEIPLRNVVSWTSMI-TGYVQNEQ---ADNALLLFKDFLEEETEVEDG--NNVP---- 1248

Query: 110  SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
                 LD   ++ VLS CSR     +    H  + K    G   V  +L++ YAKCG   
Sbjct: 1249 -----LDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPL 1303

Query: 170  SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAIC 228
                V   M   D  S N ++A YA++ L  +A   F  +   + V+ N  T S +L  C
Sbjct: 1304 VSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLAC 1363

Query: 229  GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
                A+  GK +H Q +K+       V  +++ MY KCG +E A+  F+ + ++NV SWT
Sbjct: 1364 AHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWT 1423

Query: 289  AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFH 342
            A++ G+  HG  ++ L +   M   G+ PN  TF   LA+C     SH G      + F+
Sbjct: 1424 AMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC-----SHAGLVEEGWHWFN 1478

Query: 343  AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            A   K  +  G      +VD++   G + EA   +K M      V W + +  
Sbjct: 1479 AMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 40/297 (13%)

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA++I+ G++    +   ++ +YS  G I  A     ++ ++  + +WN  I     N 
Sbjct: 46  IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNPCTFTWNLIIRANTING 104

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
            +E+A+  +  MV    A D+FT+  ++KAC+   S+   + +H  ++K  F  +V V +
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQN 164

Query: 461 SLIEAYNKCG------------------SW-------------EDAERVFSQLTAADVVS 489
           +LI+ Y KCG                  SW             ++A R+F ++ + +VVS
Sbjct: 165 NLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVS 224

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W +MI  Y +N +  +A+ LF++M  E I P   T ++++ AC+  G++  G+ + +  +
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 550 K---EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           K   E G+    A    ++D+  + G ++ A+     +P K + P W  +  +   H
Sbjct: 285 KNCIEIGVYLGTA----LIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 32/298 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---------------- 166
           V+  C+    ++LG+  H  + K    GD FV  +L++ Y KCG                
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190

Query: 167 ---------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
                          D++    +  ++P  ++ S   ++ GY +N   ++A   F ++  
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
            ++ PN YT  +++  C  +  +  G+ +H   +K        +  AL+ MY KCG ++D
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD 310

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VFE + ++++ +W ++I     HG  ++ L L   M    + P+  TF   L +C  
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370

Query: 332 LRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           ++N   G  +  ++ +  G+A        + ++Y+    + EA K  KE+G  A+S S
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPS 428



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 5/215 (2%)

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            QIH++I++S   ++  +   LI  Y+  G    A  +F Q+      +WN +I+A + N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G + +A++L++ MV +GI     TF  V+ AC++   +  G+ V  S++K YG   +   
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFV 162

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
            + ++D   + G    AL     + ++     W  + +      DL+ A  I     E+ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQEARRIFD---EIP 218

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
             +   +  + N Y       +A E  K M+ + I
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 61/118 (51%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ ++  C+    L LGR  H    K  +    ++  +L++MY+KCG IK  + V + MP
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
              + + N ++     + L  +A + F +++ ++V+P+  T+  +L  C  +  + EG
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            VL  C+    L  G+  H  + K  +  +  V  S+++MY KCG ++       +M   +
Sbjct: 1359 VLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 1418

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            + S   ++AGY  +    +A   F K+    V+PN+ T+ ++LA C     ++EG     
Sbjct: 1419 VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF- 1477

Query: 243  QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
              MK +Y  +  + +   ++ ++ + G + +A ++ + + ++ + + W +++   + H +
Sbjct: 1478 NAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKN 1537

Query: 300  YEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +  L  +   +   +DP+   + V L++
Sbjct: 1538 VD--LGEIAAQKLFELDPDNCGYYVLLSN 1564


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 191/568 (33%), Positives = 314/568 (55%), Gaps = 45/568 (7%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P    Y T+L  C    A+ EGKQ+HA  +K        +SN LL MY KCG + DAE 
Sbjct: 116 KPYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISNRLLDMYAKCGSLVDAEK 174

Query: 275 VFEGLVQRNV-------------------------------ISWTAIINGFKQHGDYEKP 303
           VF+ +V R++                                SWTAII+G  QH   E+ 
Sbjct: 175 VFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEA 234

Query: 304 LRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
           L L  LM + D    N+ T + ALA+ A++ + HMG   H  +++ G+   + V  +++D
Sbjct: 235 LELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLD 294

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G I EA+    +M +    VSW   I  + +N + EE    F  ++ ++   ++F
Sbjct: 295 MYGKCGSIEEARYIFDKM-EERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDF 353

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++ +L AC+ L +    +QIH+ +V+  F+S     S+L+  Y+KCG  E+A+ VF  L
Sbjct: 354 TFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEIL 413

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+ SW S++  Y+Q+G+  KA+  FE ++  G +P    F+ VLSAC+H+GLV  G 
Sbjct: 414 PQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGL 473

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F S+ +++G+     HY+C++DLL RAG+   A   I+ +PIKP   IW  L   CR 
Sbjct: 474 EYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRI 533

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H +L++A+  +K + E++P++ A YVTL+N+YA AG++A+    R+ M  + I K+PG S
Sbjct: 534 HGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMS 593

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRV 711
           WIE+  +++ F   + SH +  ++ E L +L ++++++G+  +           +KE+ +
Sbjct: 594 WIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENL 653

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTL 739
            YHSE+LAV FG+IS P+    +  + L
Sbjct: 654 SYHSEKLAVAFGIISTPSGTPIKVFKNL 681



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 145/265 (54%), Gaps = 3/265 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L +G++ H  I +  +  D+ V  SL++MY KCG I+    +  +M   D+ S   ++  
Sbjct: 267 LHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHT 326

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y KN   ++ F+ F  L   ++ PN +T++ +L  C  L+A D GKQ+HA  +++ + S 
Sbjct: 327 YLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           ++ ++AL+ MY KCG +E+A+SVFE L Q ++ SWT+++ G+ QHG ++K L    L+ +
Sbjct: 387 SSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLK 446

Query: 313 DGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            G  P+   F   L++C  A L +  + Y FH+   K G+         I+D+ +  G+ 
Sbjct: 447 SGTKPDGIAFIGVLSACAHAGLVDKGLEY-FHSIKEKHGLTRTIDHYACIIDLLARAGQF 505

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAG 395
            EA+  + EM        W A + G
Sbjct: 506 TEAESIINEMPIKPDKYIWAALLGG 530



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 219/467 (46%), Gaps = 47/467 (10%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + +L +C ++  L+ G++ HA I  +   G  +++  L++MYAKCG +     V  +M +
Sbjct: 123 LTLLKFCLKQRALKEGKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVH 181

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--------------------------V 214
            D+ S N +++GY K   F++A + F K+   D                          +
Sbjct: 182 RDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLM 241

Query: 215 QPNHYTYSTMLAI------CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           Q + Y+ S    I        ++ ++  GK++H   M++   S   V  +LL MY KCG 
Sbjct: 242 QKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGS 301

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E+A  +F+ + +R+V+SWT +I+ + ++G  E+   L   +    I PN++TF   L +
Sbjct: 302 IEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNA 361

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA L    +G   HA +++ G        +A+V MYS  G+I E  K + E+       S
Sbjct: 362 CADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDI-ENAKSVFEILPQPDLFS 420

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRI 447
           W + + G+ ++ + ++A+  F  ++++    D   +  +L AC+    +    E  HS  
Sbjct: 421 WTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIK 480

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGR---- 502
            K      +   + +I+   + G + +AE + +++    D   W +++     +G     
Sbjct: 481 EKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELA 540

Query: 503 ARKAIILFEKMVVEGIRPTN-STFLAVLSACSHSGLVQDGQKVFESM 548
            R A  LFE      I P N +T++ + +  + +G+  +   + E+M
Sbjct: 541 KRAAKSLFE------IEPENPATYVTLANIYASAGMRAEEANIRETM 581


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 320/601 (53%), Gaps = 13/601 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K     +  V  SLV+ Y K   +     + K M   D  + N L+ GY+   L 
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           ++A   FL+L    ++P+ +T++ +L+    L     G+Q+H   +K  ++    V NAL
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  Y K   +++   +F  + + + IS+  +I  +  +G +++   L   ++    D  +
Sbjct: 283 LDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           + F   L+   S  N  MG   H Q I  G      V  A+VDMY+      EA+K    
Sbjct: 343 FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDN 402

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +    S+V W A I+ + +  K EE I  FS M R     D+ T++SIL+AC+ L S++ 
Sbjct: 403 IA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISL 461

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+HS +++S F SNV+ GS+L++ Y KCG   DA + F ++   + VSWN++I AY+Q
Sbjct: 462 GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ 521

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           NG     +  F++M+  G +P + +FL+VLSACSH G V++    F SM + Y + P+  
Sbjct: 522 NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKRE 581

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+ MVD+L R G+ + A   ++ +P +P+  +W  +  +CR H + ++A+  + ++  +
Sbjct: 582 HYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641

Query: 620 -DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
            D  DAA Y+ +SN+YA AG   +  + +K M+ + + K P  SW+E+ ++ + F + +K
Sbjct: 642 EDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDK 701

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISL 727
           SH EM K+  K+  L +++E  G+  +            K + + YHSER A+ F L++ 
Sbjct: 702 SHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNT 761

Query: 728 P 728
           P
Sbjct: 762 P 762



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           + G++ H  + KT    + FV  +L++ Y+K   +  +  +  +MP LD  S N ++  Y
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSY 317

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A N  F ++F  F KL         + ++T+L+I  S   +  G+Q+H Q + +    ++
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V NAL+ MY KC   ++A+ +F+ +  ++ + WTA+I+ + Q G +E+ + +   MR  
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+  ++ TF   L +CA+L +  +G   H+ +I+ G     + G+A++D Y+  G + +A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            K   EM +  +SVSWNA I+ + +N   +  + +F QM+++    D  ++ S+L ACS 
Sbjct: 498 IKSFGEMPER-NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS- 555

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS---- 489
                                              CG  E+A   F+ +T    V+    
Sbjct: 556 ----------------------------------HCGFVEEALWHFNSMTQIYEVTPKRE 581

Query: 490 -WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            + SM+    +NGR  +A  L  +M  E   P+   + +VL++C
Sbjct: 582 HYTSMVDVLCRNGRFDEAEKLMTEMPFE---PSEIMWSSVLNSC 622



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 259/581 (44%), Gaps = 42/581 (7%)

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK----- 195
           A I KT    +   +   VN + + GD+     V  QMP  +  S N +++G+ K     
Sbjct: 32  AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91

Query: 196 --NALFD------------------------QAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               LFD                        +AF  +  +    ++P++ T  T+L+  G
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L   +   Q+H   +KL Y     V N+L+  Y K   +  A  +F+ ++ ++ +++ +
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           ++ G+   G  E+ + L   +   GI P+++TF   L++   L ++  G   H  V+K  
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FVG A++D YS   ++ E  K   EM +    +S+N  I  +  N + +E+ + F
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPE-LDGISYNVVITSYAWNGQFKESFDLF 330

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR--IVKSKFESNVHVGSSLIEAYN 467
            ++        +F ++++L   +   +L    QIH +   V + FES V   ++L++ Y 
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE--NALVDMYA 388

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC   ++A+++F  +     V W +MI AY Q G+  + I +F  M   G+    +TF +
Sbjct: 389 KCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFAS 448

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L AC++   +  G+++   +++  G +      S ++D   + G +  A+     +P +
Sbjct: 449 ILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER 507

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +   W  L +A   + ++       +Q+++    PD  +    LS       ++     
Sbjct: 508 NSVS-WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566

Query: 646 QRKLMKMKEIS--KEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
              + ++ E++  +E   S ++V  +  RF    K  +EMP
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP 607



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 28/317 (8%)

Query: 98  DGCSNTVPVTCYSLESLLDKQFVI-----------------EVLSYCSREECLELGRRYH 140
           DG S  V +T Y+      + F +                  +LS  +    L +GR+ H
Sbjct: 306 DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH 365

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
                     +  V  +LV+MYAKC   K    +   +          +++ Y +    +
Sbjct: 366 CQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHE 425

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +  + F  +    V  +  T++++L  C +L++I  G+QLH+  ++  ++S     +ALL
Sbjct: 426 EGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALL 485

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
             Y KCG M DA   F  + +RN +SW A+I+ + Q+G+ +  L     M + G  P+  
Sbjct: 486 DTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSV 545

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDMYSGLGEIWEAK 374
           +F   L++C     SH G++  A      M     V       T++VD+    G   EA+
Sbjct: 546 SFLSVLSAC-----SHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAE 600

Query: 375 KQLKEMGKSASSVSWNA 391
           K + EM    S + W++
Sbjct: 601 KLMTEMPFEPSEIMWSS 617



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
           PSL +   I + IVK+ F  N    +  +  + + G    A +VF Q+ A + +S N MI
Sbjct: 22  PSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             + + G+  KA  LF+ MV      T  ++  ++     S   ++  +++  M +  GI
Sbjct: 82  SGHLKFGKLSKARELFDGMV----ERTAVSWTILIGGYLQSNQSKEAFRLYADM-RRGGI 136

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFIS------NLPIKPTAPIWRPLFAA-CRCHSDLK 607
            P+   Y  +V LL   G+LE   + +        L  +    +   L  A C+ H  L 
Sbjct: 137 EPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC-LY 192

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           +A  + K +L     D   + +L   Y+  GL  +A E
Sbjct: 193 LASQLFKHMLN---KDTVTFNSLMTGYSNEGLNEEAIE 227


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 184/546 (33%), Positives = 293/546 (53%), Gaps = 3/546 (0%)

Query: 118 QFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
            FV+ + L  C R      GR  H    K     D FV  SLV+MYAK  D++    V +
Sbjct: 166 DFVLSLALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFE 224

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P  ++ S   +++G  +N         F K+   +V P+ YT +T++  C +L  + +
Sbjct: 225 RIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQ 284

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+ +H   +K   +S + +S ALL MY+KCG ++ A  VF+ L   +++ WT +I G+ Q
Sbjct: 285 GRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQ 344

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G+    LRL    R   I PN  T    L++ A LR+  +G   H   +K G+   + V
Sbjct: 345 NGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVV 404

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G A+VDMY+    + EA +    +  +   V+WN+ I+G+  N   ++A+  F QM    
Sbjct: 405 GNALVDMYAKCQAVSEADRIFGRI-SNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQG 463

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           ++ D  +  + L A   L  L   + IH   VK  F SN++V ++L+  YNKCG    A 
Sbjct: 464 SSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSAR 523

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF ++   + V+W +MI  Y   G +  +I LF +M+ +G+ P +  F ++LS CSHSG
Sbjct: 524 RVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSG 583

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           +V  G++ F+SM + + I P   HY+CMVD+L RAG LE AL FI N+P++    +W   
Sbjct: 584 MVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAF 643

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
              C  HS L+ AE   K+++ L P+   +YV +SN+Y   G+   +   R+ M+ K + 
Sbjct: 644 LHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLV 703

Query: 657 KEPGCS 662
           K PGCS
Sbjct: 704 KLPGCS 709


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 178/552 (32%), Positives = 310/552 (56%), Gaps = 9/552 (1%)

Query: 132 CLELG-----RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+ELG     +  H L+ K  +  D+ +   L+ MY+KC   +    V  ++   D+  C
Sbjct: 272 CMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHC 331

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           + +++ + ++ +  +AF  F+++  + V+PN YT+  +  +      ++  + +HA  +K
Sbjct: 332 SLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVK 391

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +     V +A++ MY+K G ++DA   F+ +   ++ SW  +++GF    + E  LR+
Sbjct: 392 SGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRI 451

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYS 365
              +  +G+  N+YT+   L  C SL +   G   HA V+K G   GD+ V   ++DMY 
Sbjct: 452 FKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQ-GDYDVSKMLLDMYV 510

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G    A+     + K     SW   ++ + +  + E+AIE F  M+R +   ++ T +
Sbjct: 511 QAGCFTNARLVFDRL-KERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLA 569

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           + L  CS L  L +  Q+HS  +KS + S+V V S+L++ Y KCG+  DAE +F +    
Sbjct: 570 TSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTH 628

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+V WN++I  Y+Q+G   KA+  F++M+ EG  P   TF+ VLSACSH+GL+ +G++ F
Sbjct: 629 DLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYF 688

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
           + +   YGI P   HY+CMVD+L +AGKL  A   I+ +P+ P A +W+ +  ACR H +
Sbjct: 689 KLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGN 748

Query: 606 LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
           +++AE  ++++ E  PDD +  + LSN+YA+     D  + R ++  + + KEPGCSWIE
Sbjct: 749 IEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIE 808

Query: 666 VYNKIYRFFSQN 677
           +  K++ F SQ+
Sbjct: 809 INGKLHVFLSQD 820



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 198/427 (46%), Gaps = 1/427 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G+  HA + ++    D F+  SL+NMY KCG +    +V   MP+ D+
Sbjct: 67  LQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDV 126

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            +   +++          A   F ++    V PN +  +  L  C   S +    Q+HAQ
Sbjct: 127 VAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQ 186

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +KL+ L    VS++L+  Y+ CG ++ AE        R+ +SW A++N + + GDY K 
Sbjct: 187 AVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKV 246

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + +   + E G + ++YT    L  C  L  +  G   H  VIKRG+     +   +++M
Sbjct: 247 MLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEM 306

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS      +A +    + +    V  +  I+ F R+    EA + F QM       +++T
Sbjct: 307 YSKCLSAEDAYEVFARIDEP-DVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYT 365

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +  +    S    +  C  IH+ IVKS F     V  +++  Y K G+ +DA   F  + 
Sbjct: 366 FVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQ 425

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D+ SWN+++  +         + +F++++ EG+     T++ +L  C+    ++ G +
Sbjct: 426 GPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQ 485

Query: 544 VFESMVK 550
           V   ++K
Sbjct: 486 VHACVLK 492



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 193/382 (50%), Gaps = 7/382 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           +Y+  L  C +  A+  GK LHA+ ++        + ++LL MY KCG + DA SVF+G+
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             R+V++WTA+++     GD    LRL   M E+G+ PN +    AL +C     S +G+
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTV--GSDLGF 179

Query: 340 --MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
               HAQ +K       +V +++V+ Y   GE+  A++ L +     S VSWNA +  + 
Sbjct: 180 TPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLD-SPVRSDVSWNALLNEYA 238

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           R+    + +  F ++V +     ++T  ++LK C  L    + + +H  ++K   E++  
Sbjct: 239 RDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV 298

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + + LIE Y+KC S EDA  VF+++   DVV  + MI  + ++  A +A  +F +M   G
Sbjct: 299 LNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG 358

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++P   TF+ +    S +G V   + +   +VK  G    +     +V +  + G ++ A
Sbjct: 359 VKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKS-GFSRTKGVCDAIVGMYVKTGAVQDA 417

Query: 578 LIFISNLPIKPTAPIWRPLFAA 599
           ++   +L   P    W  L + 
Sbjct: 418 ILAF-DLMQGPDIASWNTLLSG 438



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 17/302 (5%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L +K   + +L  C+    L  G + HA + K+   GD  V+  L++MY + G   +   
Sbjct: 461 LANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARL 520

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  ++   D+ S   +++ YAK    ++A   F  +   + +PN  T +T L++C  L+ 
Sbjct: 521 VFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLAC 580

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G QLH+ T+K  + + + VS+AL+ MY+KCG + DAE +F+     +++ W  II G
Sbjct: 581 LGSGLQLHSYTIKSGW-NSSVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICG 639

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + QHG   K L     M ++G  P+E TF   L++C     SH G +   +  +    L 
Sbjct: 640 YAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSAC-----SHAGLLDEGR--RYFKLLS 692

Query: 354 DFVG--------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
              G          +VD+ +  G++ EA+  + EM  +  +  W   I G  R     E 
Sbjct: 693 SVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKT-ILGACRMHGNIEI 751

Query: 406 IE 407
            E
Sbjct: 752 AE 753


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/565 (33%), Positives = 308/565 (54%), Gaps = 1/565 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+    +  G + H L+ ++    D  V  +++ MY+KCG++     +   MP  D
Sbjct: 284 LLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTD 343

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L+AGY +N   D+A + F  +    V+ +  T+++ L       ++   K++H+
Sbjct: 344 TVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHS 403

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++        + +AL+ +Y K G +E A   F+     +V   TA+I+G+  +G   +
Sbjct: 404 YIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVE 463

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   + ++G+ PN  T    L +CA+L +  +G   H  ++K+G+     VG++I  
Sbjct: 464 ALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITY 523

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A +  + M     SV WN  I  F +N K E AI+ F QM  +    D  
Sbjct: 524 MYAKSGRLDLAYQFFRRM-PVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSV 582

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + S+ L AC+  P+L   +++H  +V++ F S+  V S+LI+ Y+KCG    A  VF  +
Sbjct: 583 SLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMM 642

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + VSWNS+I AY  +GR R+ + LF +MV  GI+P + TFL ++SAC H+GLV +G 
Sbjct: 643 DWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGI 702

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M +EYGI     H++CMVDL GRAG+L  A   I ++P  P A  W  L  ACR 
Sbjct: 703 YYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRL 762

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++A+  SK ++ELDP+++  YV LSN++A AG      + R LMK K + K PG S
Sbjct: 763 HGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYS 822

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVY 687
           WI+V    + F + +  H +  ++Y
Sbjct: 823 WIDVNGGTHMFSAADGCHPQSVEIY 847



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 227/451 (50%), Gaps = 2/451 (0%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA +    + G   + + ++ MY  C   K +  +  ++        N L+ G++  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             FD A  FF ++ G +V P+ YT+  ++  CG L+ +   K +H     + +     + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           ++L+ +Y   G + DA+ +F+ L  R+ I W  ++NG+ ++GD+   L     MR   + 
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           PN  +F   L+ CA+      G   H  VI+ G      V   I+ MYS  G +++A+K 
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M ++  +V+WN  IAG+ +N  T+EA+  F  MV +    D  T++S L +     S
Sbjct: 336 FDIMPQT-DTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGS 394

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L  C+++HS IV+     +V++ S+L++ Y K G  E A + F Q T  DV    +MI  
Sbjct: 395 LKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISG 454

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  NG   +A+ LF  ++ EG+ P   T  +VL AC+    ++ G+++   ++K+ G+  
Sbjct: 455 YVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GLEN 513

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
                S +  +  ++G+L++A  F   +P+K
Sbjct: 514 VCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 250/520 (48%), Gaps = 9/520 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     V+  C     + L +  H L        D F+ +SL+ +Y   G I     + 
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLF 235

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++P  D    N +L GY KN  F+ A   F ++    V+PN  ++  +L++C +   + 
Sbjct: 236 DELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVR 295

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G QLH   ++  + S   V+N ++TMY KCG + DA  +F+ + Q + ++W  +I G+ 
Sbjct: 296 AGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV 355

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALG 353
           Q+G  ++ + L   M   G+  +  TF   L S   L++  + Y    H+ +++ G+   
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSV--LKSGSLKYCKEVHSYIVRHGVPFD 413

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            ++ +A+VD+Y   G++  A K  ++      +V   A I+G+  N    EA+  F  ++
Sbjct: 414 VYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC-TAMISGYVLNGLNVEALNLFRWLI 472

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           +     +  T +S+L AC+ L SL   +++H  I+K   E+   VGSS+   Y K G  +
Sbjct: 473 QEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLD 532

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A + F ++   D V WN MI ++SQNG+   AI LF +M   G +  + +  A LSAC+
Sbjct: 533 LAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACA 592

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           +   +  G+++   +V+    + +    S ++D+  + GKL +A      +  K     W
Sbjct: 593 NYPALYYGKELHCFVVRN-SFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS-W 650

Query: 594 RPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS 631
             + AA   H   +    +  +++E  + PD     V +S
Sbjct: 651 NSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/585 (32%), Positives = 325/585 (55%), Gaps = 16/585 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+   L++ Y KCG +     +  ++P   I + N +++ +  +    +A  F+  +   
Sbjct: 36  FLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLME 95

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLH--AQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            V P+ YT+S +      L  I  G++ H  A  + L+ L    V++AL+ MY K   M 
Sbjct: 96  GVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGF-VASALVDMYAKFDKMR 154

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF  +++++V+ +TA+I G+ QHG   + L++   M   G+ PNEYT    L +C 
Sbjct: 155 DAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCG 214

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +L +   G + H  V+K G+       T+++ MYS    I ++ K   ++   A+ V+W 
Sbjct: 215 NLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQL-DYANQVTWT 273

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + + G  +N + E A+  F +M+R   + + FT SSIL+ACS L  L   EQIH+  +K 
Sbjct: 274 SFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKL 333

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
             + N + G++LI  Y KCG+ + A  VF  LT  DVV+ NSMI AY+QNG   +A+ LF
Sbjct: 334 GLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELF 393

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           E++   G+ P   TF+++L AC+++GLV++G ++F S+   + I     H++CM+DLLGR
Sbjct: 394 ERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGR 453

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           + +LE A + I  +   P   +WR L  +C+ H +++MAE +  +ILEL P D   ++ L
Sbjct: 454 SRRLEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILL 512

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           +N+YA AG      E +  ++  ++ K P  SW++V  +++ F + + SH    +++E L
Sbjct: 513 TNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEML 572

Query: 691 KQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGL 724
             LM++++ +G+  N           +K   + YHSE+LA+ + L
Sbjct: 573 HGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYAL 617


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/522 (35%), Positives = 307/522 (58%), Gaps = 19/522 (3%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           ++ +G QLHA  +K    +   VS+ L+ +Y K  +   +  VF+   +++  +W+++I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 293 GFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            F Q+   E PL  +   R    DG+ P+++ +  A  +C  LR S +G   H   +K G
Sbjct: 100 AFAQN---EAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FVG+++VDMY+  GEI +A+    EM +  + VSW+  I G+ +     EA+  F
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQLDDGVEALTLF 215

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            Q +  D   ++FT+SS+++ CS    L   + IH   +K  F+S+  VGS+LI  Y+KC
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A +VF ++   ++  WNSM+ A +Q+   ++   LFE+M   G++P   +FL+VL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVL 335

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            ACSH+GLV+ G++ F S++++YGI PE  HY+ +VDLLGRAGKL+ A+  I  +P++PT
Sbjct: 336 YACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L   CR H D +MA F++ +ILE+D   + ++V LSN YA AG   +A   RK+
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           ++ + + KE G SW+E  NK++ F + ++SH++  ++YEKL++L +++E  G+  +    
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514

Query: 706 -------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                  EK + + YHSERLA+ FGLI+ P        + L 
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLR 556



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 3/381 (0%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q    +LS+ +R   L  G + HA I K  +     V+ +L+N+Y+K       + V  
Sbjct: 26  RQICNLLLSF-TRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD 84

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           + P     + + +++ +A+N     A  FF ++    V+P+ + Y +    CG L   D 
Sbjct: 85  ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV 144

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H   +K  Y     V ++L+ MY KCG + DA  +F+ + +RNV+SW+ +I G+ Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
             D  + L L      + +D N++TF+  +  C+S     +G + H   +K       FV
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G+A++ +YS  G I  A +   E+      + WN+ +    ++  T+     F +M    
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGNVG 323

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +  ++ S+L ACS    +    +  S +     E      +SL++   + G  ++A 
Sbjct: 324 MKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383

Query: 477 RVFSQLTAADVVS-WNSMIKA 496
            V  Q+      S W +++  
Sbjct: 384 SVIKQMPMRPTESVWGALLTG 404



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 158/337 (46%), Gaps = 10/337 (2%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L S    R+   G   HA ++K G+     V   ++++YS       + +   E  K  S
Sbjct: 32  LLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK-S 90

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
           S +W++ I+ F +N+    A++ F +M+ +    D+  Y S  KAC  L      + +H 
Sbjct: 91  STTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHC 150

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
             VK+ +  +V VGSSL++ Y KCG   DA  +F ++   +VVSW+ MI  Y+Q     +
Sbjct: 151 LAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVE 210

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ LF++ ++E +   + TF +V+  CS S  ++ G K+   +  +          S ++
Sbjct: 211 ALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLIHGLCLKMSFDSSSFVGSALI 269

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI--LELDPDD 623
            L  + G +E A      +P +    +W  +  AC  H+  +    + +++  + + P+ 
Sbjct: 270 SLYSKCGVIEGAYQVFDEIPTRNLG-LWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNF 328

Query: 624 AAVYVTLSNMYA--EAGLQADAEEQRKLMKMKEISKE 658
            +    LS +YA   AGL     E   LM+   I  E
Sbjct: 329 ISF---LSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 320/601 (53%), Gaps = 13/601 (2%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K     +  V  SLV+ Y K   +     + K M   D  + N L+ GY+   L 
Sbjct: 163 HTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLN 222

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           ++A   FL+L    ++P+ +T++ +L+    L     G+Q+H   +K  ++    V NAL
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L  Y K   +++   +F  + + + IS+  +I  +  +G +++   L   ++    D  +
Sbjct: 283 LDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           + F   L+   S  N  MG   H Q I  G      V  A+VDMY+      EA+K    
Sbjct: 343 FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDN 402

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +    S+V W A I+ + +  K EE I  FS M R     D+ T++SIL+AC+ L S++ 
Sbjct: 403 IA-CKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISL 461

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+HS +++S F SNV+ GS+L++ Y KCG   DA + F ++   + VSWN++I AY+Q
Sbjct: 462 GRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ 521

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           NG     +  F++M+  G +P + +FL+VLSACSH G V++    F SM + Y + P+  
Sbjct: 522 NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKRE 581

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+ MVD+L R G+ + A   ++ +P +P+  +W  +  +CR H + ++A+  + ++  +
Sbjct: 582 HYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNM 641

Query: 620 -DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
            D  DAA Y+ +SN+YA AG   +  + +K M+ + + K P  SW+E+ ++ + F + +K
Sbjct: 642 EDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDK 701

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISL 727
           SH EM K+  K+  L +++E  G+  +            K + + YHSER A+ F L++ 
Sbjct: 702 SHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNT 761

Query: 728 P 728
           P
Sbjct: 762 P 762



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           + G++ H  + KT    + FV  +L++ Y+K   +  +  +  +MP LD  S N ++  Y
Sbjct: 258 KFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSY 317

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A N  F ++F  F KL         + ++T+L+I  S   +  G+Q+H Q + +    ++
Sbjct: 318 AWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFES 377

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V NAL+ MY KC   ++A+ +F+ +  ++ + WTA+I+ + Q G +E+ + +   MR  
Sbjct: 378 RVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRT 437

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+  ++ TF   L +CA+L +  +G   H+ +I+ G     + G+A++D Y+  G + +A
Sbjct: 438 GVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDA 497

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            K   EM +  +SVSWNA I+ + +N   +  + +F QM+++    D  ++ S+L ACS 
Sbjct: 498 IKSFGEMPER-NSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS- 555

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS---- 489
                                              CG  E+A   F+ +T    V+    
Sbjct: 556 ----------------------------------HCGFVEEALWHFNSMTQIYEVTPKRE 581

Query: 490 -WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            + SM+    +NGR  +A  L  +M  E   P+   + +VL++C
Sbjct: 582 HYTSMVDVLCRNGRFDEAEKLMTEMPFE---PSEIMWSSVLNSC 622



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/581 (22%), Positives = 259/581 (44%), Gaps = 42/581 (7%)

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK----- 195
           A I KT    +   +   VN + + GD+     V  QMP  +  S N +++G+ K     
Sbjct: 32  AHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLS 91

Query: 196 --NALFD------------------------QAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               LFD                        +AF  +  +    ++P++ T  T+L+  G
Sbjct: 92  KARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFG 151

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L   +   Q+H   +KL Y     V N+L+  Y K   +  A  +F+ ++ ++ +++ +
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNS 211

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           ++ G+   G  E+ + L   +   GI P+++TF   L++   L ++  G   H  V+K  
Sbjct: 212 LMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTN 271

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FVG A++D YS   ++ E  K   EM +    +S+N  I  +  N + +E+ + F
Sbjct: 272 FVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPE-LDGISYNVVITSYAWNGQFKESFDLF 330

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR--IVKSKFESNVHVGSSLIEAYN 467
            ++        +F ++++L   +   +L    QIH +   V + FES V   ++L++ Y 
Sbjct: 331 RKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE--NALVDMYA 388

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC   ++A+++F  +     V W +MI AY Q G+  + I +F  M   G+    +TF +
Sbjct: 389 KCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFAS 448

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L AC++   +  G+++   +++  G +      S ++D   + G +  A+     +P +
Sbjct: 449 ILRACANLASISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER 507

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEE 645
            +   W  L +A   + ++       +Q+++    PD  +    LS       ++     
Sbjct: 508 NSVS-WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWH 566

Query: 646 QRKLMKMKEIS--KEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
              + ++ E++  +E   S ++V  +  RF    K  +EMP
Sbjct: 567 FNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP 607



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 138/317 (43%), Gaps = 28/317 (8%)

Query: 98  DGCSNTVPVTCYSLESLLDKQFVI-----------------EVLSYCSREECLELGRRYH 140
           DG S  V +T Y+      + F +                  +LS  +    L +GR+ H
Sbjct: 306 DGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIH 365

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
                     +  V  +LV+MYAKC   K    +   +          +++ Y +    +
Sbjct: 366 CQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHE 425

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +  + F  +    V  +  T++++L  C +L++I  G+QLH+  ++  ++S     +ALL
Sbjct: 426 EGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALL 485

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
             Y KCG M DA   F  + +RN +SW A+I+ + Q+G+ +  L     M + G  P+  
Sbjct: 486 DTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSV 545

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDMYSGLGEIWEAK 374
           +F   L++C     SH G++  A      M     V       T++VD+    G   EA+
Sbjct: 546 SFLSVLSAC-----SHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAE 600

Query: 375 KQLKEMGKSASSVSWNA 391
           K + EM    S + W++
Sbjct: 601 KLMTEMPFEPSEIMWSS 617



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
           PSL +   I + IVK+ F  N    +  +  + + G    A +VF Q+ A + +S N MI
Sbjct: 22  PSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMI 81

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             + + G+  KA  LF+ MV      T  ++  ++     S   ++  +++  M +  GI
Sbjct: 82  SGHLKFGKLSKARELFDGMV----ERTAVSWTILIGGYLQSNQSKEAFRLYADM-RRGGI 136

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFIS------NLPIKPTAPIWRPLFAA-CRCHSDLK 607
            P+   Y  +V LL   G+LE   + +        L  +    +   L  A C+ H  L 
Sbjct: 137 EPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHC-LY 192

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           +A  + K +L     D   + +L   Y+  GL  +A E
Sbjct: 193 LASQLFKHMLN---KDTVTFNSLMTGYSNEGLNEEAIE 227


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/543 (35%), Positives = 304/543 (55%), Gaps = 35/543 (6%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+ +L  C +  A  EG+++HA  +K +YL    +   L+ +Y KC  + DA +VF+ + 
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRL------VCLMREDGID---------------PNE 319
           +RNV+SWTA+I+ + Q G   + L L      + L     ID               PNE
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +TF   L SC S     +G   H+ +IK       FVG++++DMY+  G+I EA+    E
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVF-E 424

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
                  VS  A I+G+ +    EEA+E F ++       +  TY+ +L A S L +L  
Sbjct: 425 CLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDL 484

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            +Q+H+ +++S+  S V + +SLI+ Y+KCG+   + R+F  +    V+SWN+M+  YS+
Sbjct: 485 GKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 544

Query: 500 NGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPE 557
           +G  R+ + LF  M  E  ++P + T LAVLS CSH GL   G  +F  M   +  + P+
Sbjct: 545 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 604

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY C+VDLLGR+G++E A  FI  +P +PTA IW  L  ACR HS++ + EF  +Q+L
Sbjct: 605 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 664

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           E++P +A  YV LSN+YA AG   D    R LM  K ++KEPG S IE+   ++ F + +
Sbjct: 665 EIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASD 724

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLIS 726
           +SH    ++  K+K+L    +++G+           D E+++++L  HSE+LA+ FGLI+
Sbjct: 725 RSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIA 784

Query: 727 LPA 729
            PA
Sbjct: 785 SPA 787



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 145/281 (51%), Gaps = 13/281 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL+ C+      LGR+ H+LI K       FV +SL++MYAK G I     V + +P  D
Sbjct: 371 VLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERD 430

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + SC  +++GYA+  L ++A   F +L G  ++ N+ TY+ +L     L+A+D GKQ+H 
Sbjct: 431 VVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHN 490

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +  S   + N+L+ MY KCG +  +  +F+ + +R VISW A++ G+ +HG+  +
Sbjct: 491 HVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGRE 550

Query: 303 PLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA-- 359
            L+L  LMRE+  + P+  T    L+ C     SH G       I   M+ G        
Sbjct: 551 VLKLFTLMREETKVKPDSVTILAVLSGC-----SHGGLEDKGLNIFNDMSSGKIEVEPKM 605

Query: 360 -----IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                +VD+    G + EA + +K+M    ++  W + +  
Sbjct: 606 EHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGA 646


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 187/600 (31%), Positives = 321/600 (53%), Gaps = 13/600 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           +V +S+VN   K G +     V   MP  D+   N ++ GY +  LF ++   FL++ G 
Sbjct: 181 YVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGG 240

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            ++P+  T + +L  CG       G   H+  + L   +   V  +L+ MY   G    A
Sbjct: 241 GLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+ +  R++ISW A+I+G+ Q+G   +   L   + + G   +  T    +  C+  
Sbjct: 301 ALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQT 360

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G + H+ +I++ +     + TAIVDMYS  G I +A      MGK  + ++W A 
Sbjct: 361 SDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK-NVITWTAM 419

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           + G  +N   E+A++ F QM     A +  T  S++  C+ L SL     +H+  ++  +
Sbjct: 420 LVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY 479

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFS-QLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
             +  + S+LI+ Y KCG    AE++F+ +    DV+  NSMI  Y  +G  R A+ ++ 
Sbjct: 480 AFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYS 539

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M+ E ++P  +TF+++L+ACSHSGLV++G+ +F SM +++ + P+  HY+C+VDL  RA
Sbjct: 540 RMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRA 599

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G+LE A   +  +P +P+  +   L + CR H +  M   I+ +++ LD  ++ +YV LS
Sbjct: 600 GRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLS 659

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YAEA         R LM+M+ + K PG S IEV NK+Y FF+ + SH     +Y+ L+
Sbjct: 660 NIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLE 719

Query: 692 QLMQQIEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
            L  ++E  G+           +   + ++L+ HSERLA+ FGL+S P  +  + ++ L 
Sbjct: 720 NLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLR 779



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 227/444 (51%), Gaps = 2/444 (0%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I K  V  + F+ A L+ +Y+  G +     V  Q    + A CN ++AG+ +N   
Sbjct: 67  HAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQH 126

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            +    F  +   D++ N YT    L  C  L   + G ++    ++  +     V +++
Sbjct: 127 MEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSM 186

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +   +K G + DA+ VF+G+ +++V+ W +II G+ Q G + + +++   M   G+ P+ 
Sbjct: 187 VNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSP 246

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T    L +C       +G   H+ V+  GM    FV T++VDMYS LG+   A      
Sbjct: 247 VTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDS 306

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M  S S +SWNA I+G+ +N    E+   F ++V++ +  D  T  S+++ CS    L  
Sbjct: 307 MC-SRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLEN 365

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
              +HS I++ + ES++ + +++++ Y+KCG+ + A  VF ++   +V++W +M+   SQ
Sbjct: 366 GRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQ 425

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           NG A  A+ LF +M  E +   + T ++++  C+H G +  G+ V    ++ +G   +  
Sbjct: 426 NGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR-HGYAFDAV 484

Query: 560 HYSCMVDLLGRAGKLEIALIFISN 583
             S ++D+  + GK+  A    +N
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNN 508



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 156/310 (50%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C +    ++G   H+ +    +  D FV  SLV+MY+  GD  S   V   M    
Sbjct: 252 LLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRS 311

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++GY +N +  ++++ F +L       +  T  +++  C   S ++ G+ LH+
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHS 371

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +  S   +S A++ MY KCG ++ A  VF  + ++NVI+WTA++ G  Q+G  E 
Sbjct: 372 CIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAED 431

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L C M+E+ +  N  T    +  CA L +   G   HA  I+ G A    + +A++D
Sbjct: 432 ALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALID 491

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G+I  A+K           +  N+ I G+  +     A+  +S+M+      ++ 
Sbjct: 492 MYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQT 551

Query: 423 TYSSILKACS 432
           T+ S+L ACS
Sbjct: 552 TFVSLLTACS 561



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 176/367 (47%), Gaps = 13/367 (3%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K +HAQ +K    +++ ++  L+ +Y   G +  A +VF+           A+I GF ++
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             + +  RL  +M    I+ N YT   AL +C  L +  +G       ++RG  L  +VG
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +++V+     G + +A+K    M +    V WN+ I G+ +     E+I+ F +M+    
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEK-DVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGL 242

Query: 418 ACDEFTYSSILKAC--SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                T +++LKAC  S L  +  C   HS ++     ++V V +SL++ Y+  G    A
Sbjct: 243 RPSPVTMANLLKACGQSGLKKVGMCA--HSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  + +  ++SWN+MI  Y QNG   ++  LF ++V  G    + T ++++  CS +
Sbjct: 301 ALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQT 360

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             +++G+ +   ++++      E+H    + +VD+  + G ++ A I    +  K     
Sbjct: 361 SDLENGRILHSCIIRK----ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVIT 415

Query: 593 WRPLFAA 599
           W  +   
Sbjct: 416 WTAMLVG 422



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 147/311 (47%), Gaps = 12/311 (3%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           S  D   ++ ++  CS+   LE GR  H+ I +  +     ++ ++V+MY+KCG IK   
Sbjct: 343 SGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQAT 402

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            V  +M   ++ +   +L G ++N   + A   F ++    V  N  T  +++  C  L 
Sbjct: 403 IVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLG 462

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAII 291
           ++ +G+ +HA  ++  Y     +++AL+ MY KCG +  AE +F      ++VI   ++I
Sbjct: 463 SLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMI 522

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+  HG     L +   M E+ + PN+ TF   L +C     SH G +   + +   M 
Sbjct: 523 MGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTAC-----SHSGLVEEGKALFHSME 577

Query: 352 LGDFVG------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
               V         +VD++S  G + EA + +K+M    S+    A ++G   ++ T   
Sbjct: 578 RDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMG 637

Query: 406 IEAFSQMVRND 416
           I+   +++  D
Sbjct: 638 IQIADRLISLD 648



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 7/167 (4%)

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            +SS+L   S   +L   + IH++I+K+   +   + + LI  Y+  G    A  VF Q 
Sbjct: 48  VFSSLLHQFS--NTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQC 105

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD-- 540
           +  +    N+MI  + +N +  +   LF  M    I   + T +  L AC  + L+ D  
Sbjct: 106 SLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKAC--TDLLDDEV 163

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G ++  + V+  G        S MV+ L + G L  A      +P K
Sbjct: 164 GMEIIRAAVRR-GFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEK 209


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/533 (32%), Positives = 303/533 (56%), Gaps = 14/533 (2%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           TY  +L  C    A+ EGK++H+  +K  Y S   ++N L+ MY KCG + +A SVF+ +
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 280 VQRN--VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            ++N  VISW  II  + Q+G  ++ L L   M  +G+  N+ T   A+ +CASL +   
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G + HA  + + +     VGT++V+M+     +  A+     + +  + V+WN  +A + 
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRK-NLVTWNNMVAVYS 204

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N + ++AI+ F  M       D  T+ +I+ AC+ L +      +H  I  S    +V 
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           +G++++  Y KCG  ++A  +F  L   + V+W++++ AY+QNG   +AI L+ +MV  G
Sbjct: 265 LGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGG 324

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +     TFL +L ACSH+G   DG   F SM++++G++P   HY  ++DLLGR+G+L+++
Sbjct: 325 LEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLS 384

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
              I+++P +P +  W  L  ACR H D+     I++ I ELDP+D+  Y+ LSN+Y+  
Sbjct: 385 EDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSST 444

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           G   +A   RK M+++ I+K+PG S IEV ++++ F +  K H ++ +++ ++++L  ++
Sbjct: 445 GRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARV 504

Query: 698 EDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           ++ G+            + EKE  + YHSERLA+ FGLIS P        + L
Sbjct: 505 KEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNL 557



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 133/269 (49%), Gaps = 7/269 (2%)

Query: 111 LESLLDKQF-VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE ++  Q  +I  +  C+     E GR  HA+     +  D  V  SLVNM+ KC ++ 
Sbjct: 120 LEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVD 179

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           +  AV   +P  ++ + N ++A Y++N    +A   F  +D   VQP+  T+ T++  C 
Sbjct: 180 AARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACA 239

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           +L+A  EG+ +H            A+  A++  Y KCG +++A ++F+ L ++N ++W+A
Sbjct: 240 ALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSA 299

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I+  + Q+G   + + L   M + G++ N  TF   L +C+    S  G  +   +I+  
Sbjct: 300 ILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIR-- 357

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
               DF    + + Y  L ++     QL+
Sbjct: 358 ----DFGVVPVFEHYLNLIDLLGRSGQLQ 382


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/579 (33%), Positives = 315/579 (54%), Gaps = 34/579 (5%)

Query: 123 VLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C   + L   +  HA + +T   C D  +   LV++Y K G +     V  +MP  
Sbjct: 70  LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK 129

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   ++A YA++    +A  FF ++  + +QPNH+T++++L  C  L  + E    H
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FH 186

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            + +K  + S   V N L+ MY K G +E A  +F+ + QR+V+SW A+I G+ Q+G  E
Sbjct: 187 DEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIE 246

Query: 302 KPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSH------------------MGYMFH 342
             L+L   + + D I  N  T     A C  + N+                    GY+ +
Sbjct: 247 DALKLFQEIPKRDVITWN--TMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQN 304

Query: 343 AQVIKRGMALGDFV-------GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             V K    L   +         A++  ++  G++ EA K  K M    + VSWNA IAG
Sbjct: 305 GSV-KEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTM-PECNVVSWNAMIAG 362

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           + +N + E A++ F QM   D   +  T++ +L AC+ L  L    + H  +++S F+S+
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VG++L+  Y KCGS EDA +VF ++   D  S ++MI  Y+ NG +++++ LFE+M  
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
            G++P   TF+ VLSAC H+GLV +G++ F+ M + Y I P   HY CM+DLLGRAG  +
Sbjct: 483 TGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD 542

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A   I+ +PIKP A +W  L +ACR H+++ + E +++ ++ L+P + A YV LSN+YA
Sbjct: 543 EANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            AG   D    R  MK +++ K+ GCSWI +  +++ F 
Sbjct: 603 AAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFL 641



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 201/392 (51%), Gaps = 37/392 (9%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDA 272
           + P+  TY ++L  C +  ++ + K LHA  ++ Q+     ++ N L+++Y+K G + +A
Sbjct: 60  IWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEA 119

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+ +  +NV+SWTA+I  + +H   ++ L     M++ GI PN +TF   L +C  L
Sbjct: 120 RRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDL 179

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +G  FH +++K G     FVG  +VDMY+  G I  A++   +M +    VSWNA 
Sbjct: 180 E--VLGE-FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQR-DVVSWNAM 235

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI----- 447
           IAG+ +N   E+A++ F ++ + D      T+++++   +    +    ++  ++     
Sbjct: 236 IAGYVQNGLIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMPEQNL 291

Query: 448 ---------------VKSKF-------ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
                          VK  F       E NV   +++I  + + G  E+A ++F  +   
Sbjct: 292 VSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPEC 351

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           +VVSWN+MI  YSQNG+A  A+ LF +M +  ++P   TF  VL AC+   +++ G +  
Sbjct: 352 NVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAH 411

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           E +++  G   +    + +V +  + G +E A
Sbjct: 412 EVVIRS-GFQSDVLVGNTLVGMYAKCGSIEDA 442



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 202/435 (46%), Gaps = 48/435 (11%)

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            ++    + G   + L ++  M E+GI P+  T+   L  C + ++     + HA +I+ 
Sbjct: 34  GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93

Query: 349 GMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                D  +G  +V +Y  LG + EA++   EM    + VSW A IA + R++  +EA+ 
Sbjct: 94  QFECQDISLGNKLVSIYVKLGSLVEARRVFDEM-PVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +M       + FT++SIL AC+ L  L    + H  IVK  FESNV VG+ L++ Y 
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVDMYA 209

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           K G  E A  +F ++   DVVSWN+MI  Y QNG    A+ LF+++    +   N T +A
Sbjct: 210 KRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN-TMMA 268

Query: 528 VLSACSHSGLVQDGQKVFESM--------------------VKE----YGILPEE--AHY 561
             + C   G V++  ++FE M                    VKE    + I+PE     +
Sbjct: 269 GYAQC---GDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISW 325

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA----CRCHSDLKMAEFISKQIL 617
           + ++    + G++E AL     +P +     W  + A      +  + LK+  F   Q++
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMP-ECNVVSWNAMIAGYSQNGQAENALKL--FGQMQMV 382

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           ++ P+     + L    A A L+   E    +++    S       + V N +   +++ 
Sbjct: 383 DMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD------VLVGNTLVGMYAKC 436

Query: 678 KSHSEMPKVYEKLKQ 692
            S  +  KV+++++Q
Sbjct: 437 GSIEDARKVFDRMRQ 451



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 1/113 (0%)

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           + ++K+  + GR R+A+ + + MV  GI P +ST+ ++L  C ++  + D + +   M++
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
                 + +  + +V +  + G L  A      +P+K     W  + AA   H
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVS-WTAMIAAYARH 144


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/565 (33%), Positives = 311/565 (55%), Gaps = 21/565 (3%)

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
            ++ S N ++A  A+     +A   F  L  + + P   ++   +  C +L  +  G+  H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 242  AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             Q     + +   VS+AL+ MY KCG ++DA ++F+ +  RNV+SWT++I G+ Q+   +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 302  KPLRLVCLMRE------DG--IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
              L L     E      DG  +  +       L++C+ +    +    H  V+K+G    
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 354  DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
              VG  ++D Y+  G+   +KK    M +    +SWN+ IA + ++  + EA+E F  MV
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWM-EEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 2217

Query: 414  RN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            R+     +  T S++L AC+   +L   + IH +++K   E NV VG+S+I+ Y KCG  
Sbjct: 2218 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 2277

Query: 473  EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            E A++ F ++   +V SW +M+  Y  +GRA++A+ +F KMV  G++P   TF++VL+AC
Sbjct: 2278 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337

Query: 533  SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
            SH+GLV++G   F +M  +Y I P   HY CMVDL GRAG L  A   I  + +KP   +
Sbjct: 2338 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 2397

Query: 593  WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            W  L  ACR H ++ + E  ++++ ELDPD+   YV LSN+YA+AG  AD E  R LMK 
Sbjct: 2398 WGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKN 2457

Query: 653  KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------- 705
            +++ K PG S +E+  +++ F   +K H     +Y+ L++L  +++ IG+  N       
Sbjct: 2458 RQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHD 2517

Query: 706  ----EKEDRVLYHSERLAVGFGLIS 726
                EKE  +  HSE+LAV FG+++
Sbjct: 2518 VDEEEKEIILRVHSEKLAVAFGVMN 2542



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 184/372 (49%), Gaps = 32/372 (8%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+HA+ ++    +   ++  L+ +Y   G +  A  +F  +      +W  II     +
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G  E+ L L   M   GI  +++TF   + +C +  +  +G + H  +IK G +   FV 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 358 TAIVDMY----------------------------SGL---GEIWEAKKQLKEMGKSASS 386
             ++D Y                            SGL   G++ EA++   E+  S + 
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI-PSKNV 222

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           VSW A I G+ RNQ+ EEA+E F +M   +   +E+T  S++KAC+ +  L     IH  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            +K+  E  V++G++LI+ Y+KCGS +DA  VF  +    + +WNSMI +   +G  ++A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LF +M    ++P   TF+ VL AC H   V++G   F  M + YGI P   HY CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 567 LLGRAGKLEIAL 578
           L  R+  L+ A 
Sbjct: 403 LYARSNNLDEAF 414



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 169/357 (47%), Gaps = 12/357 (3%)

Query: 151  DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
            D FV+++L++MY+KCG +K   A+  ++P  ++ S   ++ GY +N   D A   F    
Sbjct: 2049 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 2108

Query: 210  -------DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
                   DG +V  +     ++L+ C  +S     + +H   +K  +     V N L+  
Sbjct: 2109 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 2168

Query: 263  YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
            Y KCG    ++ VF+ + +++ ISW ++I  + Q G   + L +   ++R  G+  N  T
Sbjct: 2169 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 2228

Query: 322  FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
             +  L +CA       G   H QVIK  +     VGT+I+DMY   G +  AKK    M 
Sbjct: 2229 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRM- 2287

Query: 382  KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-C 440
            K  +  SW A +AG+  + + +EA++ F +MVR     +  T+ S+L ACS    +    
Sbjct: 2288 KEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347

Query: 441  EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKA 496
               ++   K   E  +     +++ + + G   +A  +  ++    D V W S++ A
Sbjct: 2348 HWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 153/326 (46%), Gaps = 32/326 (9%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA I ++ +  DQ +T  L+++Y+  G I   + +  Q+      + N ++     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            L +QA   +  +    +  + +T+  ++  C +  +ID GK +H   +K  +     V 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 257 NALLTMYIKCGM-------------------------------MEDAESVFEGLVQRNVI 285
           N L+  Y KCG                                +++A  +F+ +  +NV+
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWTA+ING+ ++   E+ L L   M+ + I PNEYT    + +C  +    +G   H   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           IK  + +G ++GTA++DMYS  G I +A +  + M +  S  +WN+ I     +   +EA
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVHGLGQEA 342

Query: 406 IEAFSQMVRNDAACDEFTYSSILKAC 431
           +  FS+M R +   D  T+  +L AC
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCAC 368



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 160/356 (44%), Gaps = 28/356 (7%)

Query: 48   ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGF-IDDGCSNTVPV 106
            A  LF++ P R  +S + +I  GY+  E+   + N      D   +   ++DG  N VP 
Sbjct: 2069 ARALFDEIPLRNVVSWTSMI-TGYVQNEQ---ADNALLLFKDFLEEETEVEDG--NNVP- 2121

Query: 107  TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    LD   ++ VLS CSR     +    H  + K    G   V  +L++ YAKCG
Sbjct: 2122 --------LDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG 2173

Query: 167  DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTML 225
                   V   M   D  S N ++A YA++ L  +A   F  +   + V+ N  T S +L
Sbjct: 2174 QPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 2233

Query: 226  AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
              C    A+  GK +H Q +K+       V  +++ MY KCG +E A+  F+ + ++NV 
Sbjct: 2234 LACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVK 2293

Query: 286  SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------Y 339
            SWTA++ G+  HG  ++ L +   M   G+ PN  TF   LA+C     SH G      +
Sbjct: 2294 SWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC-----SHAGLVEEGWH 2348

Query: 340  MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             F+A   K  +  G      +VD++   G + EA   +K M      V W + +  
Sbjct: 2349 WFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 143/296 (48%), Gaps = 40/296 (13%)

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA++I+ G++    +   ++ +YS  G I  A     ++ ++  + +WN  I     N  
Sbjct: 47  HAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQI-QNPCTFTWNLIIRANTINGL 105

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E+A+  +  MV    A D+FT+  ++KAC+   S+   + +H  ++K  F  +V V ++
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165

Query: 462 LIEAYNKCG------------------SW-------------EDAERVFSQLTAADVVSW 490
           LI+ Y KCG                  SW             ++A R+F ++ + +VVSW
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +MI  Y +N +  +A+ LF++M  E I P   T ++++ AC+  G++  G+ + +  +K
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285

Query: 551 ---EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
              E G+    A    ++D+  + G ++ A+     +P K + P W  +  +   H
Sbjct: 286 NCIEIGVYLGTA----LIDMYSKCGSIKDAIEVFETMPRK-SLPTWNSMITSLGVH 336



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 32/298 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---------------- 166
           V+  C+    ++LG+  H  + K    GD FV  +L++ Y KCG                
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190

Query: 167 ---------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
                          D++    +  ++P  ++ S   ++ GY +N   ++A   F ++  
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQA 250

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
            ++ PN YT  +++  C  +  +  G+ +H   +K        +  AL+ MY KCG ++D
Sbjct: 251 ENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKD 310

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VFE + ++++ +W ++I     HG  ++ L L   M    + P+  TF   L +C  
Sbjct: 311 AIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370

Query: 332 LRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           ++N   G  +  ++ +  G+A        + ++Y+    + EA K  KE+G  A+S S
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPS 428



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           QIH++I++S   ++  +   LI  Y+  G    A  +F Q+      +WN +I+A + NG
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTING 104

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
            + +A++L++ MV +GI     TF  V+ AC++   +  G+ V  S++K YG   +    
Sbjct: 105 LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFVQ 163

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           + ++D   + G    AL     + ++     W  + +      DL+ A  I     E+  
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQEARRIFD---EIPS 219

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            +   +  + N Y       +A E  K M+ + I
Sbjct: 220 KNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 61/118 (51%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ ++  C+    L LGR  H    K  +    ++  +L++MY+KCG IK  + V + MP
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
              + + N ++     + L  +A + F +++ ++V+P+  T+  +L  C  +  + EG
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            VL  C+    L  G+  H  + K  +  +  V  S+++MY KCG ++       +M   +
Sbjct: 2232 VLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 2291

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            + S   ++AGY  +    +A   F K+    V+PN+ T+ ++LA C     ++EG     
Sbjct: 2292 VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWF- 2350

Query: 243  QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
              MK +Y  +  + +   ++ ++ + G + +A ++ + + ++ + + W +++   + H +
Sbjct: 2351 NAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKN 2410

Query: 300  YEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +  L  +   +   +DP+   + V L++
Sbjct: 2411 VD--LGEIAAQKLFELDPDNCGYYVLLSN 2437



 Score = 39.3 bits (90), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 464  EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
            E ++   +W      +  +  ++V SWNS+I   ++ G + +A+  F  +   G+ PT S
Sbjct: 1962 EDHSNLATW-----FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRS 2016

Query: 524  TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
            +F   + +CS    +  G+   +     +G   +    S ++D+  + G+L+ A      
Sbjct: 2017 SFPCTIKSCSALCDLVSGRMSHQQAFV-FGFETDLFVSSALIDMYSKCGQLKDARALFDE 2075

Query: 584  LPIK 587
            +P++
Sbjct: 2076 IPLR 2079


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 186/522 (35%), Positives = 306/522 (58%), Gaps = 19/522 (3%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           ++ +G QLHA  +K    +   VS+ L+ +Y K  +   +  VF+   +++  +W+++I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 293 GFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
            F Q+   E PL  +   R    DG+ P+++ +  A  +C  LR S +G   H   +K G
Sbjct: 100 AFAQN---EAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTG 156

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                FVG+++VDMY+  GEI +A+    EM +  + VSW+  I G+ +     EA+  F
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPER-NVVSWSGMIYGYAQLDDGVEALTLF 215

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            Q +  D   ++FT+SS+++ CS    L   + IH   +K  F+S+  VGS+LI  Y+KC
Sbjct: 216 KQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKC 275

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A +VF ++   ++  WNSM+ A +Q+   ++   LFE+M   G++P    FL+VL
Sbjct: 276 GVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVL 335

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
            ACSH+GLV+ G++ F S++++YGI PE  HY+ +VDLLGRAGKL+ A+  I  +P++PT
Sbjct: 336 YACSHAGLVEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPT 394

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W  L   CR H D +MA F++ +ILE+D   + ++V LSN YA AG   +A   RK+
Sbjct: 395 ESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKM 454

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           ++ + + KE G SW+E  NK++ F + ++SH++  ++YEKL++L +++E  G+  +    
Sbjct: 455 LRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFV 514

Query: 706 -------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                  EK + + YHSERLA+ FGLI+ P        + L 
Sbjct: 515 LRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLR 556



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 174/381 (45%), Gaps = 3/381 (0%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q    +LS+ +R   L  G + HA I K  +     V+ +L+N+Y+K       + V  
Sbjct: 26  RQICNLLLSF-TRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFD 84

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           + P     + + +++ +A+N     A  FF ++    V+P+ + Y +    CG L   D 
Sbjct: 85  ETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDV 144

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H   +K  Y     V ++L+ MY KCG + DA  +F+ + +RNV+SW+ +I G+ Q
Sbjct: 145 GKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQ 204

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
             D  + L L      + +D N++TF+  +  C+S     +G + H   +K       FV
Sbjct: 205 LDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFV 264

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G+A++ +YS  G I  A +   E+      + WN+ +    ++  T+     F +M    
Sbjct: 265 GSALISLYSKCGVIEGAYQVFDEIPTRNLGL-WNSMLIACAQHAHTQRVFGLFEEMGNVG 323

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +   + S+L ACS    +    +  S +     E      +SL++   + G  ++A 
Sbjct: 324 MKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAV 383

Query: 477 RVFSQLTAADVVS-WNSMIKA 496
            V  Q+      S W +++  
Sbjct: 384 SVIKQMPMRPTESVWGALLTG 404



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 162/353 (45%), Gaps = 10/353 (2%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           + ++  + N       L S    R+   G   HA ++K G+     V   ++++YS    
Sbjct: 16  LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
              + +   E  K  SS +W++ I+ F +N+    A++ F +M+ +    D+  Y S  K
Sbjct: 76  PLFSLQVFDETPKK-SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATK 134

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC  L      + +H   VK+ +  +V VGSSL++ Y KCG   DA  +F ++   +VVS
Sbjct: 135 ACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVS 194

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W+ MI  Y+Q     +A+ LF++ ++E +   + TF +V+  CS S  ++ G K+   + 
Sbjct: 195 WSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELG-KLIHGLC 253

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            +          S ++ L  + G +E A      +P +    +W  +  AC  H+  +  
Sbjct: 254 LKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLG-LWNSMLIACAQHAHTQRV 312

Query: 610 EFISKQI--LELDPDDAAVYVTLSNMYA--EAGLQADAEEQRKLMKMKEISKE 658
             + +++  + + P+       LS +YA   AGL     E   LM+   I  E
Sbjct: 313 FGLFEEMGNVGMKPN---FIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 179/580 (30%), Positives = 310/580 (53%), Gaps = 1/580 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  CS  +  +L R+ HA + K+    D     +L++MY K   +   + V  ++   D
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S   ++AG+++     +A   F ++    V QPN + + +  + C  L   D G+Q+H
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIH 324

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K    S      +L  MY KCG +E A +VF  + + ++++W AII GF    + +
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +       MR  G+ PN+ T    L +C+     + G   H+ ++K G  L   V  +++
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLL 444

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS    + +A +  +++G  A  VSWN  +    +  +  E +     M  +    D 
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T +++L +   + S     QIH  I+KS    ++ V ++LI  Y KCGS E A ++F  
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D++SW+S+I  Y+Q G  ++A  LF  M   G++P   TF+ +L+ACSH G+V++G
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            K++ +M ++Y I P + H SCMVDLL RAG L++A  FI  +P  P   +W+ L AAC+
Sbjct: 625 LKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACK 684

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L++ +  ++ +L++DP ++A  V L N++A +G   D    R  M+  ++ K PG 
Sbjct: 685 VHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQ 744

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           SWIE+ +K++ F +++  H E  K+Y  L++LM QI D G
Sbjct: 745 SWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDG 784



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 10/461 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +++ CS    LE GR+ H  +       D  +   +++MY KCG +K    +   MP  
Sbjct: 103 HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLK 162

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   +++GY++    D A + ++++      P+H+T+ +++  C  L      +QLH
Sbjct: 163 NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLH 222

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K ++ +     NAL++MY K   M DA +VF  ++ +++ISW ++I GF Q G YE
Sbjct: 223 AHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG-YE 281

Query: 302 KPLRLVCLMRE----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             L  +C  RE        PNE+ F  A ++C+ L     G   H   IK G+    F G
Sbjct: 282 --LEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG 339

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++ DMY+  G +  A+     + K    V+WNA IAGF      +E+   FSQM     
Sbjct: 340 CSLCDMYAKCGFLESARTVFYHIEK-PDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T  S+L ACS    L    Q+HS IVK  F  ++ V +SL+  Y+KC +  DA +
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458

Query: 478 VFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           VF  +   AD+VSWN+++ A  Q  +A + + L + M    I+P + T   VL +     
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             + G ++    + + G+  + +  + ++++  + G LE A
Sbjct: 519 SYEVGSQI-HCFIMKSGLNLDISVSNALINMYTKCGSLECA 558



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 214/447 (47%), Gaps = 11/447 (2%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +AF  F K     ++    TY+ ++  C SL +++ G+++H   +   Y     + N +L
Sbjct: 83  KAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           +MY KCG +++A ++F+ +  +NV+SWT++I+G+ ++G+ +  + L   M   G  P+ +
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF   + SC+ L +  +    HA V+K           A++ MY+   ++ +A      +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLAT 439
                 +SW + IAGF +     EA+  F +M+       +EF + S   ACS L     
Sbjct: 261 -IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDC 319

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             QIH   +K    S++  G SL + Y KCG  E A  VF  +   D+V+WN++I  ++ 
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFAS 379

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
              A+++   F +M   G+ P + T L++L ACS   ++  G +V   +VK  G   +  
Sbjct: 380 VSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIP 438

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-- 617
             + ++ +  +   L  AL    ++  K     W  L  AC   +       ++K +   
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAE 644
            + PD    +VTL+N+   +G  A  E
Sbjct: 499 RIKPD----HVTLTNVLVSSGQIASYE 521



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 158/375 (42%), Gaps = 48/375 (12%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V+ +L  CS    L  G + H+ I K     D  V  SL++MY+KC ++   + V + + 
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464

Query: 180 -YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              DI S N LL    +     +       +    ++P+H T + +L   G +++ + G 
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGS 524

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   MK       +VSNAL+ MY KCG +E A  +F+ +   ++ISW+++I G+ Q G
Sbjct: 525 QIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAG 584

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG- 357
             ++   L   MR  G+ PNE TF   L +C     SH+G +     + R M     +  
Sbjct: 585 CGKEAFELFRTMRGLGVKPNEITFVGILTAC-----SHIGMVEEGLKLYRTMQEDYRISP 639

Query: 358 -----TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
                + +VD+ +  G +  A+  +K+M      V W   +A      K    +E   + 
Sbjct: 640 TKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAAC----KVHGNLEVGKRA 695

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             N    D    ++++  C                       N+H  S         G W
Sbjct: 696 AENVLKIDPSNSAAVVMLC-----------------------NIHASS---------GHW 723

Query: 473 EDAERVFSQLTAADV 487
           +D  R+ S +   DV
Sbjct: 724 KDFARLRSSMRRMDV 738


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 215/692 (31%), Positives = 344/692 (49%), Gaps = 70/692 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LFN++P +  ++ S L+ +GY    + G    G    +  + DG            +
Sbjct: 87  ARKLFNETPIKNSITWSSLV-SGYC---KNGCEVEGLRQFSQMWSDG---------QKPS 133

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+L S         VL  CS    L  G+  H    K  +  + FV   LV+MY+KC  
Sbjct: 134 QYTLGS---------VLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 168 IKSMVAVVKQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           +     +   +P   +      +L GYA+N    +A   F ++    ++ NH+T+ ++L 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C S+SA   G+Q+H   +   +     V +AL+ MY KCG +  A  + + +   +V+ 
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W ++I G   HG  E+ L L   M    I  +++T+   L S AS +N  +G   H+  I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G      V  A+VDMY+  G +  A     ++      +SW + + G+  N   E+A+
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLVTGYVHNGFHEKAL 423

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F  M       D+F  + +  AC+ L  +    Q+H+  +KS   S +   +SLI  Y
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG  EDA RVF  +   +V+SW ++I  Y+QNG                         
Sbjct: 484 AKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG------------------------- 518

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
                     LV+ GQ  FESM K YGI P   HY+CM+DLLGRAGK+  A   ++ + +
Sbjct: 519 ----------LVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDV 568

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           +P A IW+ L +ACR H +L++ E   K +++L+P ++  YV LSNM++ AG   DA   
Sbjct: 569 EPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHI 628

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--- 703
           R+ MK   I+KEPG SWIE+ ++++ F S+++SH    ++Y K+ ++M  I++ GH    
Sbjct: 629 RRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDM 688

Query: 704 -------DNEKEDRVL-YHSERLAVGFGLISL 727
                  D E ++R L YHSE+LAV FGL+++
Sbjct: 689 NFALRDMDEEAKERSLAYHSEKLAVAFGLLTV 720



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 5/345 (1%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +DE ++L  Q   + Y  K    N +++ Y   G + +A  +F     +N I+W+++++G
Sbjct: 53  VDEARKLFDQ---MPYRDKYTW-NIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSG 108

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + ++G   + LR    M  DG  P++YT    L +C++L   H G M H   IK  +   
Sbjct: 109 YCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEAN 168

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV T +VDMYS    + EA+     +    + V W A + G+ +N ++ +AI+ F +M 
Sbjct: 169 IFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMR 228

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 + FT+ SIL AC+ + + A   Q+H  I+ S F  NV+V S+L++ Y KCG   
Sbjct: 229 NQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLA 288

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A  +   +   DVV WNSMI     +G   +A++LF KM    IR  + T+ +VL + +
Sbjct: 289 SARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLA 348

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
               ++ G+ V  S+  + G    +   + +VD+  + G L  AL
Sbjct: 349 SCKNLKIGESV-HSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392


>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
          Length = 1118

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/552 (34%), Positives = 301/552 (54%), Gaps = 11/552 (1%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  C+    L  GR  HA   ++     D FV  ++V MY++CGD+   +     +   
Sbjct: 572  LLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKP 631

Query: 182  DIASCNCLLAGYAKNALFDQAFSFFLK---LDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            DI     ++ GY +N + ++A  FF +     G+ V P   T  ++++    L  + +G+
Sbjct: 632  DIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTP--VTLVSVMSAAAQLGHVRKGQ 689

Query: 239  QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
              HA  ++       A+ NA+L  Y+K G ++ +  +FEG+  R+VI+W+ +I G+ QHG
Sbjct: 690  ACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHG 749

Query: 299  DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            D     R+   M +  + PN  T    L +CA + ++  G   H   +  G  L   V T
Sbjct: 750  DAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVAT 809

Query: 359  AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            A+VDMY       EA +    M K    V+W A I G  +N+   E++ +F  M+ ND  
Sbjct: 810  ALVDMYMKCSCHEEAMRLFHRMPKK-DVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHV 868

Query: 419  CDEFTYSSILKACSLLPS--LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
             D  T   +L ACS      LA C  +H  +V++ F +N  V ++L++ Y+KCG  + A 
Sbjct: 869  PDAVTMVKVLAACSEFGGNRLAIC--LHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAV 926

Query: 477  RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            RVF   T  D+V W SMI  Y  +G  ++A+ L+++M+   I+P N TFL+VLSACSHSG
Sbjct: 927  RVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSG 986

Query: 537  LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            LVQ+G ++F+SM + +G++P   H S MVDLLGRAG+L+ A+  I ++  +  A  W  L
Sbjct: 987  LVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCAL 1046

Query: 597  FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             AACR H++ KM+E  +K +L+LDPD    Y  L+N+YA      + ++ R ++K +++ 
Sbjct: 1047 LAACRKHNNTKMSEVAAKNLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGRDLR 1106

Query: 657  KEPGCSWIEVYN 668
            K  G S +EV N
Sbjct: 1107 KVAGYSSVEVTN 1118



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/380 (22%), Positives = 187/380 (49%), Gaps = 5/380 (1%)

Query: 120  VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
            ++ V+S  ++   +  G+  HA + + ++  D  +  +++  Y K GD+++ + + + M 
Sbjct: 672  LVSVMSAAAQLGHVRKGQACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMT 731

Query: 180  YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              D+ + +C++ GY ++      F  + ++    VQPN  T  ++L  C  +   +EGK+
Sbjct: 732  DRDVITWSCMIKGYVQHGDAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKR 791

Query: 240  LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
            LH   + +    +  V+ AL+ MY+KC   E+A  +F  + +++V++W A+I G  Q+  
Sbjct: 792  LHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNEL 851

Query: 300  YEKPLR-LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L    C++  D + P+  T    LA+C+    + +    H  +++ G     FV  
Sbjct: 852  PGESLHSFKCMLLNDHV-PDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAA 910

Query: 359  AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            A++D+YS  G++ ++  ++ E       V W + IAG+  +   +EA+  + +M+ +   
Sbjct: 911  ALLDLYSKCGDL-DSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQ 969

Query: 419  CDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T+ S+L ACS    +    QI   + +      N    S++++   + G  ++A R
Sbjct: 970  PNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIR 1029

Query: 478  VFSQLTAADVV-SWNSMIKA 496
            V   +    V  +W +++ A
Sbjct: 1030 VIRDMDGRAVAHTWCALLAA 1049



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 25/321 (7%)

Query: 120  VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
            ++ VL  C+     E G+R H +        +  V  +LV+MY KC   +  + +  +MP
Sbjct: 773  LVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSCHEEAMRLFHRMP 832

Query: 180  YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              D+ +   ++ G  +N L  ++   F  +   D  P+  T   +LA C           
Sbjct: 833  KKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAIC 892

Query: 240  LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
            LH   ++  + +   V+ ALL +Y KCG ++ A  VFEG  +++++ W ++I G+  HG 
Sbjct: 893  LHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGL 952

Query: 300  YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
             ++ + L   M    I PN  TF   L++C+           H+ +++ G+ + D +   
Sbjct: 953  GQEAVALYQRMIASSIQPNNVTFLSVLSACS-----------HSGLVQEGIQIFDSMTQV 1001

Query: 358  ----------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
                      +A+VD+    GE+ EA + +++M   A + +W A +A   ++  T+ +  
Sbjct: 1002 FGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSEV 1061

Query: 408  AFSQMVRNDAACDEFTYSSIL 428
            A   +++ D   D   Y ++L
Sbjct: 1062 AAKNLLKLDP--DHVGYYNLL 1080



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 176/393 (44%), Gaps = 31/393 (7%)

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA-IVDMYS- 365
           C      + P +     A A+   L  +H+    HA +++ G+       TA ++  Y  
Sbjct: 464 CFPAVASMQPLQKLLEAAAATSTPLAAAHL----HANILRSGLLHSSHHLTAHVLACYPP 519

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTY 424
           GL     A+    E+ +S +    NA +    R ++   AI    ++ VR D     FT 
Sbjct: 520 GL-----ARDLFDEI-RSPTPRLANALLRAHIRARQWRAAILLGQRLRVRRDG----FTL 569

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           S +L+AC+ LPSL     +H+  V+S   S +  V +++++ Y++CG    A   +  L 
Sbjct: 570 SLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLE 629

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVV-EGIRPTNSTFLAVLSACSHSGLVQDGQ 542
             D+V   S++  Y QNG A +A+  F + VV +G+  T  T ++V+SA +  G V+ GQ
Sbjct: 630 KPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQ 689

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
                +V+   +  + A  + ++    + G L+ ++     +  +     W  +      
Sbjct: 690 ACHAYVVRN-SLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVI-TWSCMIKGYVQ 747

Query: 603 HSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           H D      + +++++  + P+     VTL ++     L  DAEE ++L +   ++   G
Sbjct: 748 HGDAHTGFRMYREMVKARVQPNS----VTLVSVLQACALVVDAEEGKRLHR---VAVSIG 800

Query: 661 CSW-IEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           C   + V   +   + +   H E  +++ ++ +
Sbjct: 801 CELELGVATALVDMYMKCSCHEEAMRLFHRMPK 833



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 28/256 (10%)

Query: 48   ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTR--NDSFPDGFIDDGCSNTVP 105
            A +LF++ PK+  ++ + +I  G    E  G S + +     ND  PD            
Sbjct: 824  AMRLFHRMPKKDVVAWAAVI-GGLTQNELPGESLHSFKCMLLNDHVPDAVT--------- 873

Query: 106  VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
                          +++VL+ CS      L    H  + +     + FV A+L+++Y+KC
Sbjct: 874  --------------MVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKC 919

Query: 166  GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
            GD+ S V V +     DI     ++AGY  + L  +A + + ++    +QPN+ T+ ++L
Sbjct: 920  GDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVL 979

Query: 226  AICGSLSAIDEGKQL-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
            + C     + EG Q+  + T     +      +A++ +  + G +++A  V   +  R V
Sbjct: 980  SACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAV 1039

Query: 285  I-SWTAIINGFKQHGD 299
              +W A++   ++H +
Sbjct: 1040 AHTWCALLAACRKHNN 1055


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 181/574 (31%), Positives = 313/574 (54%), Gaps = 36/574 (6%)

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           C++  YA + L   + + F  L    + P+ + + ++L         +  + LHA  ++L
Sbjct: 46  CIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRL 105

Query: 248 QYLSKTAVSNALLTMYIKCG----------------------MMEDAESVFEGLVQRNVI 285
            +      +NAL+ MY K                         ++    +F+ +  R+V+
Sbjct: 106 GFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVV 165

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SW  +I G  Q+G YE+ L +V  M ++ + P+ +T +  L       N   G   H   
Sbjct: 166 SWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYA 225

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           I+ G     F+G++++DMY+   ++ E       +  +  ++SWN+ IAG  +N + ++ 
Sbjct: 226 IRHGFDKDVFIGSSLIDMYAKCTQV-ELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQG 284

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +  F +M++      + ++SS++ AC+ L +L   +Q+H+ I++  F+ N  + SSL++ 
Sbjct: 285 LGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDM 344

Query: 466 YNKCGSWEDAERVFSQLTAAD--VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           Y KCG+ + A  +F+++   D  +VSW ++I   + +G A  A+ LFE+M+V+G++P   
Sbjct: 345 YAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYV 404

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
            F+AVL+ACSH+GLV +G K F SM +++G+ P   HY+ + DLLGRAG+LE A  FISN
Sbjct: 405 AFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISN 464

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +  +PT  +W  L AACR H ++++AE +  +IL +DP +   +V +SN+Y+ A    DA
Sbjct: 465 MGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDA 524

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            + R  M+   + K P CSWIEV NK++ F + +KSH    K+ E L  L++Q+E  G+ 
Sbjct: 525 AKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 584

Query: 704 -----------DNEKEDRVLYHSERLAVGFGLIS 726
                      +  K D +  HSERLA+ FG+IS
Sbjct: 585 LDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIIS 618



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 23/341 (6%)

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W  II  +  HG     L    L+R  GI P+ + F   L +    ++ ++    HA 
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 345 VIKRGMALGDFVGTAIVDMYSG-------LGEIWEAK--------------KQLKEMGKS 383
           VI+ G     +   A+++MYS        L E  +A+              ++L +    
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              VSWN  IAG  +N   EEA+    +M + +   D FT SSIL   +   ++   ++I
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H   ++  F+ +V +GSSLI+ Y KC   E +   F  L+  D +SWNS+I    QNGR 
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
            + +  F +M+ E ++P   +F +V+ AC+H   +  G+++   +++  G    +   S 
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIR-LGFDDNKFIASS 340

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPLFAACRCH 603
           ++D+  + G +++A    + + +     + W  +   C  H
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH 381



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 131/586 (22%), Positives = 247/586 (42%), Gaps = 85/586 (14%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG--------- 166
           D+     +L   +  +   L +  HA + +     D +   +L+NMY+K           
Sbjct: 75  DRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEF 134

Query: 167 -------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
                         I S+  +  +MP  D+ S N ++AG A+N ++++A +   ++   +
Sbjct: 135 PQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKEN 194

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           ++P+ +T S++L I    + + +GK++H   ++  +     + ++L+ MY KC  +E + 
Sbjct: 195 LRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSV 254

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
             F  L  R+ ISW +II G  Q+G +++ L     M ++ + P + +F+  + +CA L 
Sbjct: 255 CAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLT 314

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK-SASSVSWNAQ 392
             ++G   HA +I+ G     F+ ++++DMY+  G I  A+    ++       VSW A 
Sbjct: 315 ALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAI 374

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS-------------------- 432
           I G   +    +A+  F +M+ +        + ++L ACS                    
Sbjct: 375 IMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFG 434

Query: 433 -------------LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
                        LL      E+ +  I     E    V S+L+ A     + E AE+V 
Sbjct: 435 VAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVV 494

Query: 480 SQLTAADVVSWNS---MIKAYSQNGRARKAIILFEKMVVEGIRPTNS-----------TF 525
           +++   D  +  +   M   YS   R R A  L  +M   G++ T +           TF
Sbjct: 495 NKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTF 554

Query: 526 LAVLSACSHSGLVQDGQKV-FESMVKEYGILP--------EEAHYSCMVDLL-GRAGKLE 575
           LA   +  +   + +   +  E M KE  +L         +E H     DLL   + +L 
Sbjct: 555 LAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKR---DLLRTHSERLA 611

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLK-MAEFISKQILELD 620
           IA   IS      T  + + +     CH+ +K MA+ + ++I+  D
Sbjct: 612 IAFGIISTTS-GTTIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRD 656


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 209/718 (29%), Positives = 371/718 (51%), Gaps = 48/718 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +++++ P +  +ST+ +I +G++   +   +R+ +    D+ PD  +    + T+ +
Sbjct: 66  AARKVYDEMPHKNTVSTNTMI-SGHVKTGDVSSARDLF----DAMPDRTV---VTWTILM 117

Query: 107 TCYSLESLLDKQFVI-------------------EVLSYCSREECLELGRRYHALITKTA 147
             Y+  S  D+ F +                    +L  C+         + HA   K  
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177

Query: 148 VCGDQFVTAS--LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
              + F+T S  L+  Y +   +     + +++P  D  + N L+ GY K+ L+ ++   
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           FLK+     QP+ +T+S +L     L     G+QLHA ++   +    +V N +L  Y K
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
              + +   +F+ + + + +S+  +I+ + Q   YE  L     M+  G D   + F   
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
           L+  A+L +  MG   H Q +   +A  D    VG ++VDMY+      EA+   K + +
Sbjct: 358 LSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
             ++VSW A I+G+ +       ++ F++M  ++   D+ T++++LKA +   SL   +Q
Sbjct: 415 R-TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H+ I++S    NV  GS L++ Y KCGS +DA +VF ++   + VSWN++I A++ NG 
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
              AI  F KM+  G++P + + L VL+ACSH G V+ G + F++M   YGI P++ HY+
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP- 621
           CM+DLLGR G+   A   +  +P +P   +W  +  ACR H +  +AE  ++++  ++  
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
            DAA YV++SN+YA AG      + +K M+ + I K P  SW+EV +KI+ F S +++H 
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLP 728
              ++  K+ +L  +IE  G+  +            K + + YHSERLAV F LIS P
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTP 771



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 26/238 (10%)

Query: 435 PSLAT---CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           PS AT     ++ +RI+K+ F+++    + ++E   + G    A +V+ ++   + VS N
Sbjct: 24  PSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +MI  + + G    A  LF+ M       T  T+  ++   + +    +  K+F  M + 
Sbjct: 84  TMISGHVKTGDVSSARDLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139

Query: 552 YG-ILPEEAHYSCMV---------DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
               LP+   ++ ++         + +G+     + L F +N P    + +    +   R
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN-PFLTVSNVLLKSYCEVR 198

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
               L +A  + ++I E    D+  + TL   Y + GL    E     +KM++   +P
Sbjct: 199 ---RLDLACVLFEEIPE---KDSVTFNTLITGYEKDGLY--TESIHLFLKMRQSGHQP 248


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 180/507 (35%), Positives = 281/507 (55%), Gaps = 17/507 (3%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           L+ DG   +P++YTY  +   C  LS I  G ++    + L + S   VSNA++ + + C
Sbjct: 70  LQCDG--TKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSC 127

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G ++ A  +F+    R+++SW ++ING+ + G   + L     M+ +GI P+E T    +
Sbjct: 128 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 187

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA-- 384
           +SCA L +  +G   H  + + G+ L   +  A++DMY   G +  A+K    M      
Sbjct: 188 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 247

Query: 385 -------------SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
                          V WNA I G+    + +EA+  F++M   +   DE T  S L AC
Sbjct: 248 SWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSAC 307

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S L +L     IH  I K +   NV +G++LI+ Y KCG    A +VF +L   + ++W 
Sbjct: 308 SQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWT 367

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I   + +G A  AI  F +M+   + P   TFL +LSAC H GLV++G+K F  M  +
Sbjct: 368 AIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSK 427

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           + + P+  HYSCMVDLLGRAG LE A   I ++PI+  A +W  LF ACR H ++ M E 
Sbjct: 428 FNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGER 487

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            + ++L++DP D+ +YV L+NMY EA +  +A + RKLM+ + + K PGCS IEV   +Y
Sbjct: 488 AASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSIEVNGIVY 547

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            F  ++KSH +  ++YE L QL +Q+E
Sbjct: 548 EFIVRDKSHPQSEQIYECLIQLTRQLE 574



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 187/394 (47%), Gaps = 21/394 (5%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+R   + +G      +       D FV+ +++++   CGD+     +  +    D+ S 
Sbjct: 89  CARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSW 148

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ GY +     +A +F+ ++    ++P+  T   +++ C  L  +D G++ H    +
Sbjct: 149 NSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 208

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT----------------AI 290
                   ++NAL+ MY+KCG +E A  +F+ +  + ++SWT                A+
Sbjct: 209 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAM 268

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+      ++ L L   M+   I+P+E T    L++C+ L    +G   H  + K  +
Sbjct: 269 IGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHEL 328

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           +L   +GTA++DMY+  G+I +A +  +E+    +S++W A I+G   +     AI  FS
Sbjct: 329 SLNVALGTALIDMYAKCGKITKAIQVFQEL-PGRNSLTWTAIISGLALHGNAHGAIAYFS 387

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG--SSLIEAYNK 468
           +M+ N    DE T+  +L AC     +    +  S++  SKF  +  +   S +++   +
Sbjct: 388 EMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM-SSKFNLSPKLKHYSCMVDLLGR 446

Query: 469 CGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNG 501
            G  E+AE +   +   AD V W ++  A   +G
Sbjct: 447 AGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 21/295 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI------- 168
           D+  +I V+S C++ E L+LGR  H  I +  +     +  +L++MY KCG++       
Sbjct: 179 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 238

Query: 169 -----KSMVA----VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
                K+MV+    +  +MP  D+   N ++ GY       +A + F ++  +++ P+  
Sbjct: 239 DSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEV 298

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T  + L+ C  L A+D G  +H    K +     A+  AL+ MY KCG +  A  VF+ L
Sbjct: 299 TMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL 358

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RN ++WTAII+G   HG+    +     M ++ + P+E TF   L++C        G 
Sbjct: 359 PGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGR 418

Query: 340 MFHAQVIKR---GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
            + +Q+  +      L  +  + +VD+    G + EA++ +K M   A +V W A
Sbjct: 419 KYFSQMSSKFNLSPKLKHY--SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGA 471



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 129/270 (47%), Gaps = 23/270 (8%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATC 440
           ++ ++ SWN  I GF  ++   EA+  + ++++ D    D +TY  + KAC+ L  +   
Sbjct: 39  RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 98

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            +I   ++   F+S++ V +++I     CG  + A ++F +    D+VSWNSMI  Y + 
Sbjct: 99  SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 158

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G A +A+  + +M VEGI+P   T + V+S+C+    +  G++     ++E G+      
Sbjct: 159 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRES-HCYIEENGLKLTVPL 217

Query: 561 YSCMVDLLGRAGKLEIA----------------LIFISNLPIKPTAPIWRPLFAACRCHS 604
            + ++D+  + G LE A                 +    +P K   P W  +      H+
Sbjct: 218 ANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVP-WNAMIGG-YVHA 275

Query: 605 DL---KMAEFISKQILELDPDDAAVYVTLS 631
           +     +A F   Q + ++PD+  +   LS
Sbjct: 276 NRGKEALALFNEMQAMNINPDEVTMVSCLS 305


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 210/668 (31%), Positives = 342/668 (51%), Gaps = 92/668 (13%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMP-YL-DIASCNCLLAGYAKNALFDQAFSFFLK 208
           D     +L+  Y   G+++    +    P Y+ D    N ++ GYA N     A   F  
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 209 LDGIDVQPNHYTYSTML-AICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIK- 265
           +   D +P+ +T++++L A+   +    +  Q+H   +K       ++V NALL++Y+K 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 266 -------CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD------------------- 299
                  C  M  A  +F+ + +R+ ++WT +I G+ ++ D                   
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 300 ------------YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
                       +++ L L   MR  GI  ++ T+T  +++CA++ +  MG   HA ++K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317

Query: 348 RGM----ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +    +    V  A++ +Y    ++ EA+K    M    + ++WNA ++G+    + E
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAM-PVRNIITWNAILSGYVNAGRME 376

Query: 404 EAIEAFSQM------------------------------VRNDA--ACDEFTYSSILKAC 431
           EA   F +M                              +R D    CD F ++  L AC
Sbjct: 377 EAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCD-FAFAGALTAC 435

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S+L +L    Q+H+++V   +ES++ VG+++I  Y KCG  E AE VF  + + D+VSWN
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           SMI A  Q+G   KAI LF++M+ EG+ P   TFL VL+ACSH+GLV+ G+  F SM++ 
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P E HY+ MVDL  RAG    A I I ++P KP AP+W  L A CR H ++ +   
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            ++Q+ +L P +   YV LSN+YA+ G   +  + RKLM+ + + KEP CSWIEV NK++
Sbjct: 616 AAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVH 675

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAV 720
            F   +  H E+  VY  L+QL  +++ +G+  +           +KE  +  HSE+LAV
Sbjct: 676 VFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAV 735

Query: 721 GFGLISLP 728
           GFG++ LP
Sbjct: 736 GFGIMKLP 743



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 65/431 (15%)

Query: 44  ASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP-------DGFI 96
           A  SA +LF++ PKR  L+ + +I  GY+  ++   +R  +    ++          G++
Sbjct: 207 AMVSARKLFDEMPKRDELTWTTMI-TGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYV 265

Query: 97  DDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
             GC       C  +  L    D      ++S C+     ++G++ HA I K  +  +  
Sbjct: 266 HCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHS 325

Query: 154 ----VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--- 206
               V+ +L+ +Y K   +     +   MP  +I + N +L+GY      ++A SFF   
Sbjct: 326 FCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEM 385

Query: 207 ------------------------------LKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                                         ++LDG   +P  + ++  L  C  L A++ 
Sbjct: 386 PVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGF--EPCDFAFAGALTACSVLGALEN 443

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+QLHAQ + L Y S  +V NA+++MY KCG++E AESVF  +   +++SW ++I    Q
Sbjct: 444 GRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQ 503

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGM 350
           HG   K + L   M ++G+ P+  TF   L +C     SH G      + F++ +   G+
Sbjct: 504 HGHGVKAIELFDQMLKEGVFPDRITFLTVLTAC-----SHAGLVEKGRHYFNSMLESYGI 558

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA-- 408
              +     +VD++   G    A+  +  M     +  W A +AG   +   +  IEA  
Sbjct: 559 TPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAE 618

Query: 409 --FSQMVRNDA 417
             F  M +ND 
Sbjct: 619 QLFKLMPQNDG 629


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/580 (33%), Positives = 305/580 (52%), Gaps = 35/580 (6%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTM---LAICGSLSAIDEGKQLHAQTMKLQYL 250
           A    F  A S FL++      P     +++   L  C +L     G  LHA  ++    
Sbjct: 24  AAEGHFCDAVSLFLRMRA-SAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAF 82

Query: 251 SKTAVSNALLTMYIK--CGMM-----------------EDAESVFEGLVQRNVISWTAII 291
           +    +NALL +Y K  C  +                 E    VF+ +++R+V+SW  ++
Sbjct: 83  ADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLV 142

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G  + G + + L  V  M  +G  P+ +T +  L   A   +   G   H    + G  
Sbjct: 143 LGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFD 202

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FVG++++DMY+       + K    +      + WN+ +AG  +N   EEA+  F +
Sbjct: 203 SDVFVGSSLIDMYANCTRTDYSVKVFDNL-PVRDHILWNSLLAGCAQNGSVEEALGIFRR 261

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M++        T+SS++  C  L SL   +Q+H+ ++   FE NV + SSLI+ Y KCG 
Sbjct: 262 MLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGE 321

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
              A  +F ++++ DVVSW +MI  Y+ +G AR+A++LFE+M +   +P + TFLAVL+A
Sbjct: 322 ISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTA 381

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH+GLV  G K F+SM   YGI+P   H++ + D LGRAG+L+ A  FIS + IKPTA 
Sbjct: 382 CSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTAS 441

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L  ACR H +  +AE ++K+I+EL+P     +V LSNMY+ +G   +A   R+ M+
Sbjct: 442 VWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMR 501

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------ 705
            K + K+P CSWIEV +K++ F + ++SH    ++ + L    +Q+   GH  N      
Sbjct: 502 KKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDVFQ 561

Query: 706 ----EKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
               E +  VL  HSE+LA+ FG+IS PA  K    + L 
Sbjct: 562 DIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLR 601



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 230/555 (41%), Gaps = 82/555 (14%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAK--CGDIKSM-VAVVK--------------- 176
           LG   HAL  ++    D+F   +L+N+Y K  C  + S  VA+V                
Sbjct: 68  LGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVF 127

Query: 177 -QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   D+ S N L+ G A+     +A  F  K+     +P+ +T ST+L I    + + 
Sbjct: 128 DEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVK 187

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G ++H    +  + S   V ++L+ MY  C   + +  VF+ L  R+ I W +++ G  
Sbjct: 188 RGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCA 247

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  E+ L +   M + G+ P   TF+  +  C +L +   G   HA VI  G     F
Sbjct: 248 QNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVF 307

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + ++++DMY   GEI  A     +M  S   VSW A I G+  +    EA+  F +M   
Sbjct: 308 ISSSLIDMYCKCGEISIAHCIFDKM-SSPDVVSWTAMIMGYALHGPAREALVLFERMELG 366

Query: 416 DAACDEFTYSSILKACS--------------------LLPSL-------------ATCEQ 442
           +A  +  T+ ++L ACS                    ++P+L                ++
Sbjct: 367 NAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDE 426

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI---KAYSQ 499
            ++ I K + +    V S+L+ A     +   AE V  ++   +  S  S +     YS 
Sbjct: 427 AYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSA 486

Query: 500 NGRARKAIILFEKMVVEGIR--PTNS---------TFLAVLSACSHSGLVQDGQKVFESM 548
           +GR  +A  L E M  +G++  P  S          F+A   +      + D    F   
Sbjct: 487 SGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQ 546

Query: 549 VKEYGILP---------EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +   G +P         EE H S +  L G + KL I    IS  P      + + L   
Sbjct: 547 MAREGHVPNTEDVFQDIEEEHKSYV--LCGHSEKLAIVFGIIST-PAGTKIRVMKNLRVC 603

Query: 600 CRCHSDLKMAEFISK 614
             CH+   + +FISK
Sbjct: 604 IDCHT---VTKFISK 615



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 171/385 (44%), Gaps = 50/385 (12%)

Query: 94  GFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
           GF+   C        ++L +      V+ + + C+    ++ G   H    +     D F
Sbjct: 156 GFVRKMCREGFRPDSFTLST------VLPIFAECAD---VKRGLEVHGFAFRNGFDSDVF 206

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V +SL++MYA C      V V   +P  D    N LLAG A+N   ++A   F ++    
Sbjct: 207 VGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG 266

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           V+P   T+S+++ +CG+L+++  GKQLHA  +   +     +S++L+ MY KCG +  A 
Sbjct: 267 VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAH 326

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            +F+ +   +V+SWTA+I G+  HG   + L L   M      PN  TF   L +C+   
Sbjct: 327 CIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS--- 383

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
                   HA ++ +G                     W+  K +        ++   A +
Sbjct: 384 --------HAGLVDKG---------------------WKYFKSMSNHYGIVPTLEHFAAL 414

Query: 394 AGFF-RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           A    R  + +EA    S+M     A     +S++L+AC +  +    E++  +I++ + 
Sbjct: 415 ADTLGRAGELDEAYNFISKMQIKPTAS---VWSTLLRACRVHKNTMLAEEVAKKIMELEP 471

Query: 453 ESNVHVGSSLI--EAYNKCGSWEDA 475
            S   +GS ++    Y+  G W +A
Sbjct: 472 RS---IGSHVVLSNMYSASGRWNEA 493


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 191/600 (31%), Positives = 315/600 (52%), Gaps = 13/600 (2%)

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
           +F+    +N     GD+       +++   DI   N ++ GY +  + D     ++ +  
Sbjct: 19  RFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQI 78

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V PN +T+  +L  CG  S    GKQ+H QT K  + S   V N+L++MY K G +  
Sbjct: 79  SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISY 138

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ L  R V+SWT+II+G+ Q+GD  + L +   MR+  + P+       + +  +
Sbjct: 139 ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTN 198

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           + +   G   H  V K G+     +  ++  MY+  G +  A+     M K  + + WNA
Sbjct: 199 VEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK-PNLILWNA 257

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I+G+  N   EEAI+ F +M+  +   D  T  S + A + + SL     +   I KS+
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 317

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           +  +  V + LI+ Y KCGS   A  VF ++   DVV W+ MI  Y  +G  ++AI L+ 
Sbjct: 318 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 377

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M   G+ P + TF+ +L+AC +SGLV++G ++F  M  ++GI P   HYSC+VDLLGRA
Sbjct: 378 EMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRA 436

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G L  A  FI ++PIKP   +W  L +AC+ H  +++ E  ++Q+  LDP +   YV LS
Sbjct: 437 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 496

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YA A L       R +M  K ++K+ G S IE+   +  F   ++SH +  +++E+L 
Sbjct: 497 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 556

Query: 692 QLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +L ++++  G+  +           E E+ + +HSERLAV +G+IS         ++ L 
Sbjct: 557 RLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLR 616



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 195/451 (43%), Gaps = 16/451 (3%)

Query: 83  GYSTRN--DSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYH 140
           GY+ +N  D+    ++D   S   P  C++          + VL  C       +G++ H
Sbjct: 59  GYTQKNIVDAPIRMYMDMQISQVHP-NCFTF---------LYVLKACGGTSVEGIGKQIH 108

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
               K     + FV  SLV+MYAK G I     V  ++    + S   +++GY +N    
Sbjct: 109 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 168

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +A + F ++   +V+P+     +++    ++  + +GK +H    KL    +  +  +L 
Sbjct: 169 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 228

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           TMY K G++E A   F  + + N+I W A+I+G+  +G  E+ ++L   M    I  +  
Sbjct: 229 TMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSI 288

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T   A+ + A + +  +       + K       FV T ++DMY+  G I+ A+     +
Sbjct: 289 TMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRV 348

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                 V W+  I G+  +   +EAI  +++M +     ++ T+  +L AC     +   
Sbjct: 349 ADK-DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 407

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQ 499
            ++   +     E +    S +++   + G    A + + S      V  W +++ A   
Sbjct: 408 WELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKI 467

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + + R   I  E++ +  + P N+     LS
Sbjct: 468 HRKVRLGEIAAEQLFI--LDPYNTGHYVQLS 496


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 194/647 (29%), Positives = 348/647 (53%), Gaps = 46/647 (7%)

Query: 133 LELGRRYHALITKTAVCGDQ--FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           L LG++ H    +    GDQ  F   +L+ MYAK G +    A+ +     D+ S N ++
Sbjct: 213 LRLGKQLHGYSLRV---GDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMI 269

Query: 191 AGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           + ++++  F +A +FF  + L+G+++  +  T +++L  C  L  +D GK++HA  ++  
Sbjct: 270 SSFSQSDRFSEALAFFRLMVLEGVEL--DGVTIASVLPACSHLERLDVGKEIHAYVLRNN 327

Query: 249 YLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL- 306
            L + + V +AL+ MY  C  +E    VF+ ++ R +  W A+I+G+ ++G  EK L L 
Sbjct: 328 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 387

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
           + +++  G+ PN  T    + +C            H   +K G     +V  A++DMYS 
Sbjct: 388 IEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSR 447

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC------- 419
           +G++  ++     M +    VSWN  I G+  + +   A+    +M R +          
Sbjct: 448 MGKMDISETIFDSM-EVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDN 506

Query: 420 ----------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
                     +  T  ++L  C+ L ++A  ++IH+  +++   S++ VGS+L++ Y KC
Sbjct: 507 DDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC 566

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR-----PTNST 524
           G    + RVF+++   +V++WN +I A   +G+  +A+ LF+ MV E  R     P   T
Sbjct: 567 GCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVT 626

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+ V +ACSHSGL+ +G  +F  M  ++G+ P   HY+C+VDLLGRAG+LE A   ++ +
Sbjct: 627 FITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 686

Query: 585 PIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           P +      W  L  ACR H ++++ E  +K +L L+P+ A+ YV LSN+Y+ AGL   A
Sbjct: 687 PAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKA 746

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E RK M+   + KEPGCSWIE  +++++F + + SH +  +++  L+ L +++   G+ 
Sbjct: 747 MEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYV 806

Query: 704 -----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                      ++EKE+ +  HSE+LA+ FG+++ P       ++ L
Sbjct: 807 PDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 853



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 255/546 (46%), Gaps = 46/546 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL   S  + L+ G + HA   K          A +LVNMY KCG I  +  V  ++   
Sbjct: 98  VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR 157

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC---GSLSAIDEGK 238
           D  S N  +A   +   ++QA   F  +   +++ + +T  ++   C   G +  +  GK
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGK 217

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           QLH  ++++    KT  +NAL+ MY K G ++D++++FE  V R+++SW  +I+ F Q  
Sbjct: 218 QLHGYSLRVGD-QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD 276

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVG 357
            + + L    LM  +G++ +  T    L +C+ L    +G   HA V++   +    FVG
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336

Query: 358 TAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           +A+VDMY    ++   ++     +G+      WNA I+G+ RN   E+A+  F +M++  
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIE--LWNAMISGYARNGLDEKALILFIEMIKVA 394

Query: 417 AAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               +  T +S++ AC    + +  E IH   VK  F+ + +V ++L++ Y++ G  + +
Sbjct: 395 GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDIS 454

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGI---------------- 518
           E +F  +   D VSWN+MI  Y  +GR   A++L  +M  +E                  
Sbjct: 455 ETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPY 514

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P   T + VL  C+    +  G+++    ++   +  +    S +VD+  + G L ++ 
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM-LASDITVGSALVDMYAKCGCLNLSR 573

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
              + +P K     W  L  AC  H          ++ LEL            NM AEAG
Sbjct: 574 RVFNEMPNK-NVITWNVLIMACGMHGK-------GEEALEL----------FKNMVAEAG 615

Query: 639 LQADAE 644
              +A+
Sbjct: 616 RGGEAK 621



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 9/395 (2%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT-AVSN 257
           F +A S ++++     +P+++ +  +L     L  +  G+Q+HA  +K  Y S +  V+N
Sbjct: 73  FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVAN 132

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
            L+ MY KCG + D   VF+ +  R+ +SW + I    +   +E+ L     M+ + ++ 
Sbjct: 133 TLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMEL 192

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD---FVGTAIVDMYSGLGEIWEAK 374
           + +T      +C++L   H G     Q+    + +GD   F   A++ MY+ LG + +  
Sbjct: 193 SSFTLVSVALACSNLGVMH-GLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRV-DDS 250

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K L E       VSWN  I+ F ++ +  EA+  F  MV      D  T +S+L ACS L
Sbjct: 251 KALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHL 310

Query: 435 PSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             L   ++IH+ ++++     N  VGS+L++ Y  C   E   RVF  +    +  WN+M
Sbjct: 311 ERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAM 370

Query: 494 IKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           I  Y++NG   KA+ILF +M+ V G+ P  +T  +V+ AC H     + + +    VK  
Sbjct: 371 ISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK-L 429

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G   +    + ++D+  R GK++I+     ++ ++
Sbjct: 430 GFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR 464



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 193/412 (46%), Gaps = 34/412 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVA 173
           LD   +  VL  CS  E L++G+  HA + +   +  + FV ++LV+MY  C  ++S   
Sbjct: 295 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 354

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLS 232
           V   +    I   N +++GYA+N L ++A   F+++  +  + PN  T ++++  C    
Sbjct: 355 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCE 414

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A    + +H   +KL +     V NAL+ MY + G M+ +E++F+ +  R+ +SW  +I 
Sbjct: 415 AFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMIT 474

Query: 293 GFKQHGDYEKPLRLVCLMRE-----------------DGIDPNEYTFTVALASCASLRNS 335
           G+   G Y   L L+  M+                      PN  T    L  CA+L   
Sbjct: 475 GYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAI 534

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G   HA  I+  +A    VG+A+VDMY+  G +  +++   EM  + + ++WN  I  
Sbjct: 535 AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM-PNKNVITWNVLIMA 593

Query: 396 FFRNQKTEEAIEAFSQMVR-----NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
              + K EEA+E F  MV       +A  +E T+ ++  ACS    ++    +  R+   
Sbjct: 594 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRM--- 650

Query: 451 KFESNVHVGSS----LIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKA 496
           K +  V   S     +++   + G  E+A  + + + A    V +W+S++ A
Sbjct: 651 KHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 702



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 1/168 (0%)

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +K   K    S S+ SW   +    R+    EAI  + +M  + A  D F + ++LKA S
Sbjct: 44  SKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVS 103

Query: 433 LLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            L  L T EQIH+  VK  +  S+V V ++L+  Y KCG   D  +VF ++T  D VSWN
Sbjct: 104 GLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWN 163

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S I A  +  +  +A+  F  M +E +  ++ T ++V  ACS+ G++ 
Sbjct: 164 SFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMH 211



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 13/229 (5%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    +  G+  HA   +  +  D  V ++LV+MYAKCG +     V  +MP
Sbjct: 521 LMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMP 580

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICGSLSAI 234
             ++ + N L+     +   ++A   F  +      G + +PN  T+ T+ A C     I
Sbjct: 581 NKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLI 640

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR--NVISWTAII 291
            EG  L  +      +  T+   A ++ +  + G +E+A  +   +      V +W++++
Sbjct: 641 SEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPN---EYTFTVALASCASLRNSHM 337
              + H + E  L  V       ++PN    Y     + S A L N  M
Sbjct: 701 GACRIHQNVE--LGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAM 747


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 204/663 (30%), Positives = 341/663 (51%), Gaps = 54/663 (8%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSM 171
           LL+    + +L+ C     L   ++ H+LI K+ +    F  + L+   A     D+   
Sbjct: 22  LLENHPHLNLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYA 78

Query: 172 VAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           +++   + +   +I   N L+  ++       +   F ++    + PN +T+ ++   C 
Sbjct: 79  LSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCA 138

Query: 230 SLSAIDEGKQLHAQTMKL------------------------------QYLSKTAVS-NA 258
              A  E KQLHA  +KL                              +   + AVS  A
Sbjct: 139 KSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTA 198

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+T Y+  G ++DA  +F+ +  ++V+SW A+I G+ Q G +E+ L     M+E  + PN
Sbjct: 199 LITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPN 258

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
           + T    L++C  LR+  +G    + V  RG      +  A+VDMYS  GEI  A+K   
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFD 318

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
            M +    + WN  I G+      EEA+  F  M+R +   ++ T+ ++L AC+ L +L 
Sbjct: 319 GM-EDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALD 377

Query: 439 TCEQIHSRIVK----SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             + +H+ I K    +   +NV + +S+I  Y KCG  E AE+VF  + +  + SWN+MI
Sbjct: 378 LGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMI 437

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              + NG A +A+ LFE+M+ EG +P + TF+ VLSAC+ +G V+ G + F SM K+YGI
Sbjct: 438 SGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGI 497

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P+  HY CM+DLL R+GK + A + + N+ ++P   IW  L  ACR H  ++  E++++
Sbjct: 498 SPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAE 557

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ EL+P+++  YV LSN+YA AG   D  + R  +  K + K PGC+ IE+   ++ F 
Sbjct: 558 RLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFL 617

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNE-KEDRVLYHSERLAVGFG 723
             +K H +   ++  L ++ + +E+ G            D E KE  +  HSE+LA+ FG
Sbjct: 618 VGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFG 677

Query: 724 LIS 726
           LIS
Sbjct: 678 LIS 680


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 190/546 (34%), Positives = 295/546 (54%), Gaps = 5/546 (0%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           + L  C+  + L+ G++ H  + K     D  V   L++MYAKCG+IKS   V   +   
Sbjct: 147 KALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLR 205

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++     ++AGY KN L ++    F ++   +V  N YTY T++  C  LSA+ +GK  H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K      + +  +LL MY+KCG + +A  VF      +++ WTA+I G+  +G   
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   M+   I PN  T    L+ C  + N  +G   H   IK G+   + V  A+V
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALV 384

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY+   +  +AK    EM      V+WN+ I+GF +N    EA+  F +M       + 
Sbjct: 385 HMYAKCYQNRDAKYVF-EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF--ESNVHVGSSLIEAYNKCGSWEDAERVF 479
            T +S+  AC+ L SLA    +H+  VK  F   S+VHVG++L++ Y KCG  + A  +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +   + ++W++MI  Y + G    ++ LFE+M+ +  +P  STF ++LSAC H+G+V 
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+K F SM K+Y   P   HY+CMVD+L RAG+LE AL  I  +PI+P    +      
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C  HS   + E + K++L+L PDDA+ YV +SN+YA  G    A+E R LMK + +SK  
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683

Query: 660 GCSWIE 665
           G S +E
Sbjct: 684 GHSTME 689



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 22/485 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+  + L   R+ H ++T   + GD  +   LV++Y   G  K    V  Q+P  D
Sbjct: 50  LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106

Query: 183 IASCNCLLAGYAKN-------ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                 +L  Y  N        L+D       + D I        +S  L  C  L  +D
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDI-------VFSKALKACTELQDLD 159

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK++H Q +K+       ++  LL MY KCG ++ A  VF  +  RNV+ WT++I G+ 
Sbjct: 160 NGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++   E+ L L   MRE+ +  NEYT+   + +C  L   H G  FH  ++K G+ L   
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + T+++DMY   G+I  A++   E       V W A I G+  N    EA+  F +M   
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSH-VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   +  T +S+L  C L+ +L     +H   +K     + +V ++L+  Y KC    DA
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDA 396

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + VF   +  D+V+WNS+I  +SQNG   +A+ LF +M  E + P   T  ++ SAC+  
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           G +  G  +    VK   +     H  + ++D   + G  + A +    +  K T   W 
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT-WS 515

Query: 595 PLFAA 599
            +   
Sbjct: 516 AMIGG 520



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 173/327 (52%), Gaps = 12/327 (3%)

Query: 218 HYTYST----MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           HY  S+    +L+ C   + ID  +Q H        +   +++  L+++Y   G  +DA 
Sbjct: 40  HYAASSPCFLLLSKC---TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VF+ + + +   W  ++  +  + +  + ++L  L+ + G   ++  F+ AL +C  L+
Sbjct: 97  LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +   G   H Q++K   +  + V T ++DMY+  GEI  A K   ++    + V W + I
Sbjct: 157 DLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDI-TLRNVVCWTSMI 214

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AG+ +N   EE +  F++M  N+   +E+TY +++ AC+ L +L   +  H  +VKS  E
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            +  + +SL++ Y KCG   +A RVF++ +  D+V W +MI  Y+ NG   +A+ LF+KM
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQD 540
               I+P   T  +VLS C   GL+++
Sbjct: 335 KGVEIKPNCVTIASVLSGC---GLIEN 358



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 137/264 (51%), Gaps = 4/264 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  VLS C   E LELGR  H L  K  +  D  V  +LV+MYAKC   +    V +   
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMES 404

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI + N +++G+++N    +A   F +++   V PN  T +++ + C SL ++  G  
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464

Query: 240 LHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           LHA ++KL +L+ ++  V  ALL  Y KCG  + A  +F+ + ++N I+W+A+I G+ + 
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFV 356
           GD    L L   M +    PNE TFT  L++C      + G  + + + K          
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEM 380
            T +VDM +  GE+ +A   +++M
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKM 608



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 14/191 (7%)

Query: 415 NDAACDEFTYSS----ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           ND +   +  SS    +L  C+ + SL    Q H  +  +    ++ + + L+  Y   G
Sbjct: 34  NDGSSLHYAASSPCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFG 90

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             +DA  VF Q+   D   W  M++ Y  N  + + + L++ ++  G R  +  F   L 
Sbjct: 91  YTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALK 150

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILP--EEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           AC+    + +G+K+   +VK    +P  +    + ++D+  + G+++ A    +++ ++ 
Sbjct: 151 ACTELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206

Query: 589 TAPIWRPLFAA 599
               W  + A 
Sbjct: 207 VV-CWTSMIAG 216


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 191/600 (31%), Positives = 315/600 (52%), Gaps = 13/600 (2%)

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
           +F+    +N     GD+       +++   DI   N ++ GY +  + D     ++ +  
Sbjct: 34  RFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQI 93

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V PN +T+  +L  CG  S    GKQ+H QT K  + S   V N+L++MY K G +  
Sbjct: 94  SQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISY 153

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ L  R V+SWT+II+G+ Q+GD  + L +   MR+  + P+       + +  +
Sbjct: 154 ARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTN 213

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           + +   G   H  V K G+     +  ++  MY+  G +  A+     M K  + + WNA
Sbjct: 214 VEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKP-NLILWNA 272

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I+G+  N   EEAI+ F +M+  +   D  T  S + A + + SL     +   I KS+
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 332

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
           +  +  V + LI+ Y KCGS   A  VF ++   DVV W+ MI  Y  +G  ++AI L+ 
Sbjct: 333 YRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYN 392

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M   G+ P + TF+ +L+AC +SGLV++G ++F  M  ++GI P   HYSC+VDLLGRA
Sbjct: 393 EMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRA 451

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G L  A  FI ++PIKP   +W  L +AC+ H  +++ E  ++Q+  LDP +   YV LS
Sbjct: 452 GYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLS 511

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YA A L       R +M  K ++K+ G S IE+   +  F   ++SH +  +++E+L 
Sbjct: 512 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 571

Query: 692 QLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +L ++++  G+  +           E E+ + +HSERLAV +G+IS         ++ L 
Sbjct: 572 RLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLR 631



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 195/451 (43%), Gaps = 16/451 (3%)

Query: 83  GYSTRN--DSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYH 140
           GY+ +N  D+    ++D   S   P  C++          + VL  C       +G++ H
Sbjct: 74  GYTQKNIVDAPIRMYMDMQISQVHP-NCFTF---------LYVLKACGGTSVEGIGKQIH 123

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
               K     + FV  SLV+MYAK G I     V  ++    + S   +++GY +N    
Sbjct: 124 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 183

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +A + F ++   +V+P+     +++    ++  + +GK +H    KL    +  +  +L 
Sbjct: 184 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 243

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           TMY K G++E A   F  + + N+I W A+I+G+  +G  E+ ++L   M    I  +  
Sbjct: 244 TMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSI 303

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T   A+ + A + +  +       + K       FV T ++DMY+  G I+ A+     +
Sbjct: 304 TMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRV 363

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                 V W+  I G+  +   +EAI  +++M +     ++ T+  +L AC     +   
Sbjct: 364 ADK-DVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 422

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQ 499
            ++   +     E +    S +++   + G    A + + S      V  W +++ A   
Sbjct: 423 WELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKI 482

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           + + R   I  E++ +  + P N+     LS
Sbjct: 483 HRKVRLGEIAAEQLFI--LDPYNTGHYVQLS 511


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 196/627 (31%), Positives = 325/627 (51%), Gaps = 16/627 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAV 174
           D   +  ++S C+  + + LG   H+L   + + C    + A LVNMY+  G +    ++
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA-LVNMYSTAGKLDEAESL 303

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSA 233
            + M   D+ S N +++ Y ++    +A     +L   D   PN  T+S+ L  C S  A
Sbjct: 304 FRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEA 363

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G+ +HA  ++    +   + N+LLTMY KC  MED E VFE +   +V+S   +  G
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMAL 352
           +    D    +R+   MR  GI PN  T      +C SL + H  G   HA V + G+  
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            +++  +++ MY+  G++ E+   +     + S +SWNA IA   R+ + EEAI+ F   
Sbjct: 484 DEYITNSLITMYATCGDL-ESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  D F  +  L + + L SL    Q+H   VK+  + + HV ++ ++ Y KCG  
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           +   +            WN++I  Y++ G  ++A   F+ MV  G +P   TF+A+LSAC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GL+  G   + SM   +G+ P   H  C+VDLLGR GK   A  FI  +P+ P   I
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           WR L ++ R H +L +    +K +LELDP D + YV LSN+YA      D ++ R  MK 
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKT 782

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---------- 702
            +++K P CSW+++ N++  F   ++SH    K+Y KL +++ ++ ++G+          
Sbjct: 783 IKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHD 842

Query: 703 TDNEKEDRVLY-HSERLAVGFGLISLP 728
           TD E+++  L+ HSE+LA+ +GL+ +P
Sbjct: 843 TDEEQKEHNLWNHSEKLALAYGLLVVP 869



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 239/497 (48%), Gaps = 9/497 (1%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP++ ++L SL      +    +   +E    G   HAL  +  + G+ ++  +L+++Y 
Sbjct: 37  VPLSGFALASL------VTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYG 90

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
             G + +   +  +MP  ++ S   ++   + N   ++A   + ++    V  N    +T
Sbjct: 91  SRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALAT 150

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ++++CG+L     G Q+ A  +    L+  +V+N+L+TM+     ++DAE +F+ + +R+
Sbjct: 151 VVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERD 210

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            ISW A+I+ +     Y K   ++  MR   + P+  T    ++ CAS     +G   H+
Sbjct: 211 RISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHS 270

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     +  A+V+MYS  G++ EA+   + M +    +SWN  I+ + ++    
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRR-DVISWNTMISSYVQSNSCV 329

Query: 404 EAIEAFSQMVRND-AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           EA+E   Q+++ D    +  T+SS L ACS   +L     IH+ I++   ++ + +G+SL
Sbjct: 330 EALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSL 389

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y+KC S ED ERVF  +   DVVS N +   Y+       A+ +F  M   GI+P  
Sbjct: 390 LTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNY 449

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            T + +   C   G +        + V + G+L +E   + ++ +    G LE +    S
Sbjct: 450 ITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFS 509

Query: 583 NLPIKPTAPIWRPLFAA 599
            +  K     W  + AA
Sbjct: 510 RINNKSVIS-WNAIIAA 525


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 179/589 (30%), Positives = 315/589 (53%), Gaps = 17/589 (2%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           SL+N+Y KC  ++    +  +M    + S N L+ GY  +    +    F  +     QP
Sbjct: 60  SLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQP 119

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N Y ++T+L+ C     + EG Q H    K   +    V ++L+ MY KC  ++ A  V 
Sbjct: 120 NEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVL 179

Query: 277 E---GLVQRN--VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           E   G +  +     + +++N   + G   + + ++  M ++G+  +  T+   +  C  
Sbjct: 180 ESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQ 239

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           +R+  +G   HAQ++K G+    FVG+ +VDM+   G++  A+K    + ++ + V W +
Sbjct: 240 IRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL-QNRNVVVWTS 298

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +  + +N + EE +   S M R     +EFT++ +L A + + +L   + +H+R+ K  
Sbjct: 299 LMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLG 358

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            ++ V VG++LI  Y+KCG  + +  VF  +   D+++WN+MI  YSQ+G  ++A++LF+
Sbjct: 359 IKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQ 418

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            M+  G  P + TF+ VLSAC+H  LV +G      ++K + + P   HY+C+V +L RA
Sbjct: 419 DMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRA 478

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G LE A  F+    +K     WR L  AC  H +  +   I++ IL++DP D   Y  LS
Sbjct: 479 GMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLS 538

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           NMYA+A         RK+M+ + + KEPG SWIE+ N ++ F S   +H E  ++Y K++
Sbjct: 539 NMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQ 598

Query: 692 QLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPA 729
            L++ I+ +G+            D +KE  + YHSE+LA+ +GL+ +P+
Sbjct: 599 LLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPS 647



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 191/382 (50%), Gaps = 10/382 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK----QM 178
           VLS C+    +  G + H  + K  +    FV +SLV+MY+KC  +   + V++     +
Sbjct: 127 VLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNI 186

Query: 179 PYLDIASC-NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
              + A C N +L    ++    +A     ++    V  +  TY +++ +CG +  +  G
Sbjct: 187 DNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLG 246

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            Q+HAQ +K        V + L+ M+ KCG +  A  VF+GL  RNV+ WT+++  + Q+
Sbjct: 247 LQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQN 306

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G++E+ L L+  M  +G   NE+TF V L + A +     G + HA+V K G+     VG
Sbjct: 307 GEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVG 366

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A+++MYS  G I  +     +M ++   ++WNA I G+ ++   ++A+  F  M+    
Sbjct: 367 NALINMYSKCGCIDSSYDVFFDM-RNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGE 425

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAE 476
             +  T+  +L AC+ L  +       ++++K  K E  +   + ++    + G  E+AE
Sbjct: 426 CPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAE 485

Query: 477 RVFSQLTAA--DVVSWNSMIKA 496
             F + T    DVV+W  ++ A
Sbjct: 486 N-FMRTTQVKWDVVAWRVLLNA 506



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 15/334 (4%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVS---------NALLTMYIKCGMMEDAESVFEGLVQRNV 284
           ++ GK +H Q + ++  S T  S         N+L+ +Y+KC  +  A  +F+ +  R+V
Sbjct: 28  LNFGKSIHTQLL-IRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSV 86

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +S+  ++ G+   G++ + ++L   M      PNEY FT  L++CA       G   H  
Sbjct: 87  VSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGF 146

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK----EMGKSASSVSWNAQIAGFFRNQ 400
           + K G+    FV +++V MYS    +  A + L+     +     +  +N+ +     + 
Sbjct: 147 LFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESG 206

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           +  EA+E   +MV      D  TY S++  C  +  L    Q+H++++K     +V VGS
Sbjct: 207 RLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGS 266

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            L++ + KCG    A +VF  L   +VV W S++ AY QNG   + + L   M  EG   
Sbjct: 267 MLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMS 326

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              TF  +L+A +    ++ G  +  + V++ GI
Sbjct: 327 NEFTFAVLLNAFAGMAALRHGD-LLHARVEKLGI 359



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 119/233 (51%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + V+  C +   L LG + HA + K  +  D FV + LV+M+ KCGD+ S   V 
Sbjct: 226 DSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVF 285

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   ++     L+  Y +N  F++  +    +D      N +T++ +L     ++A+ 
Sbjct: 286 DGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALR 345

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G  LHA+  KL   ++  V NAL+ MY KCG ++ +  VF  +  R++I+W A+I G+ 
Sbjct: 346 HGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYS 405

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           QHG  ++ L L   M   G  PN  TF   L++CA L   + G+ +  Q++K 
Sbjct: 406 QHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKH 458


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 193/644 (29%), Positives = 348/644 (54%), Gaps = 24/644 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   +  VL+ C++   +E GR       +     D  V  SL++++AKCG ++   +V
Sbjct: 66  IDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESV 125

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
            + M  + DI S   ++  Y ++   D A   + K+    ++P+ +TY+ +L  C S   
Sbjct: 126 FRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDF 185

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           + +GK +H   ++ ++    +V NAL+TMY KCG ++D++S+F  +  ++V+SW A+I  
Sbjct: 186 LLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAA 245

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  +G  +    L   M   G  P+ YTF+  L +CAS +    G M H ++  RG    
Sbjct: 246 YTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRD 305

Query: 354 DFVGTAIVDMYSGLGEIWEAKK-----QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
             +   ++ M++  G +  A++     + KE+G      +WN  +A + +  K ++A+  
Sbjct: 306 FAMQNNLISMFTRCGSLESARRYFYSIEKKELG------AWNTMLAAYAQFDKGKDALFL 359

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           +  M+      D FT+SS++ +C+ L +L   + IH       FE +V +G++L+  Y K
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAK 419

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CGS  DA++ F  ++  DVVSW++MI A +Q+G A +A+ L   M ++GI     T  +V
Sbjct: 420 CGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSV 479

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L ACSH G + +G   F  + +++GI  +E +    +DLLGRAG L+ A   +  +P K 
Sbjct: 480 LHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKV 539

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
           +      L   C+ H D++  + ++K+I+ L+P++   YV L+NMYA AG   D  + R+
Sbjct: 540 SFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRR 599

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH-------SEMPKVYEKLKQ---LMQQIE 698
            M+ K + ++ GCS IE  +KIY F   + S+       +E+ ++Y ++K+    +    
Sbjct: 600 YMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPDTR 659

Query: 699 DIGH--TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           D+ H  +D++KE+ + +HSE++A+GFGLI+ P  +     + L 
Sbjct: 660 DVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLR 703



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 207/397 (52%), Gaps = 2/397 (0%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F+   ++ MY KC   +    V  ++   +  S + L+  Y +NA++ +A   + ++ 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             ++  + YT S++LA C  L  ++EG+ +  +  +L +     V+ +L+ ++ KCG +E
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 271 DAESVFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +AESVF  +   R++IS TA+I  + +HG  +  L     MR  G++P+ +T+   L +C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           +S      G   H  +++        V  A++ MY+  G + ++K     M      VSW
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTM-DVKDVVSW 239

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           NA IA +      ++A   F +M       D +T+SSIL AC+    L     +H RI  
Sbjct: 240 NAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITA 299

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
             F+ +  + ++LI  + +CGS E A R F  +   ++ +WN+M+ AY+Q  + + A+ L
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           ++ M++EG  P   TF +V+ +C+  G +++G+ + E
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHE 396



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 183/365 (50%), Gaps = 2/365 (0%)

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           T ++N ++ MY KC   EDA  VF+ + QRN  SW+ ++  + Q+  Y++ L +   M  
Sbjct: 2   TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR 61

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
             I  + YT +  LA+C  L +   G M   +  + G      V T+++ +++  G + E
Sbjct: 62  KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A+   + MG     +S  A I  + R+ K + A++ + +M       D FTY++IL ACS
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACS 181

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
               L   + IH  I++SK   N+ V ++LI  Y KCGS +D++ +F  +   DVVSWN+
Sbjct: 182 SPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNA 241

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI AY+  G  + A  LF +M   G  P   TF ++L AC+    ++DG ++    +   
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDG-RMLHVRITAR 300

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G   + A  + ++ +  R G LE A  +  ++  K     W  + AA       K A F+
Sbjct: 301 GFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGA-WNTMLAAYAQFDKGKDALFL 359

Query: 613 SKQIL 617
            K +L
Sbjct: 360 YKNML 364


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 200/675 (29%), Positives = 340/675 (50%), Gaps = 70/675 (10%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV---VKQM 178
            VL  C        G  +H LI       + F+  +LV MY++CG ++    +   + Q 
Sbjct: 160 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 219

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI------DVQPNHYTYSTMLAICGSLS 232
              D+ S N +++ + K++    A   F K+  I      + + +  +   +L  CGSL 
Sbjct: 220 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 279

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+ + K++H   ++        V NAL+  Y KCG+ME+A  VF  +  ++V+SW A++ 
Sbjct: 280 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 339

Query: 293 GFKQHGDYEKPLRLVCLMREDGID-----------------------------------P 317
           G+ Q G++E    L   MR++ I                                    P
Sbjct: 340 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 399

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL--GDFVG--------TAIVDMYSGL 367
           N  T    L++CASL     G   HA  +K  +     DF G         A++DMYS  
Sbjct: 400 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 459

Query: 368 GEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN--DAACDEFTY 424
                A+    ++  +  + V+W   I G  +   + +A++ F +M+      A + +T 
Sbjct: 460 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 519

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGSSLIEAYNKCGSWEDAERVFSQL 482
           S IL AC+ L ++   +QIH+ +++  ++ES+ + V + LI+ Y+KCG  + A  VF  +
Sbjct: 520 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 579

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +    +SW SM+  Y  +GR  +A+ +F+KM   G  P + TFL VL ACSH G+V  G 
Sbjct: 580 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 639

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  +YG+ P   HY+C +DLL R+G+L+ A   + ++P++PTA +W  L +ACR 
Sbjct: 640 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRV 699

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           HS++++AE    +++E++ ++   Y  +SN+YA AG   D    R LMK   I K PGCS
Sbjct: 700 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           W++       FF  ++SH   P++Y  L+ L+ +I+ +G+            + EK + +
Sbjct: 760 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 819

Query: 712 LYHSERLAVGFGLIS 726
           + HSE+LA+ +GL++
Sbjct: 820 VEHSEKLALAYGLLT 834



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 219/510 (42%), Gaps = 97/510 (19%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C   + +   +  H    +     D FV  +L++ YAKCG +++ V V   M 
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGIDVQ----------------- 215
           + D+ S N ++AGY+++  F+ AF  F       + LD +                    
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387

Query: 216 -----------PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS----------KTA 254
                      PN  T  ++L+ C SL A  +G ++HA ++K   L+             
Sbjct: 388 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 447

Query: 255 VSNALLTMYIKCGMMEDAESVFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           V NAL+ MY KC   + A S+F+   L +RNV++WT +I G  Q+GD    L+L   M  
Sbjct: 448 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 507

Query: 313 D--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK--RGMALGDFVGTAIVDMYSGLG 368
           +  G+ PN YT +  L +CA L    +G   HA V++  R  +   FV   ++DMYS  G
Sbjct: 508 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 567

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A+     M +  S++SW + + G+  + +  EA++ F +M +     D+ T+  +L
Sbjct: 568 DVDTARHVFDSMSQK-SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 626

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS                                    CG  +     F  ++A   +
Sbjct: 627 YACS-----------------------------------HCGMVDQGLSYFDSMSADYGL 651

Query: 489 S-----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           +     +   I   +++GR  KA    + M +E   PT   ++A+LSAC     V+  + 
Sbjct: 652 TPRAEHYACAIDLLARSGRLDKAWRTVKDMPME---PTAVVWVALLSACRVHSNVELAEH 708

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
               +V+       +  Y+ + ++   AG+
Sbjct: 709 ALNKLVEMNA--ENDGSYTLISNIYATAGR 736



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 217/481 (45%), Gaps = 64/481 (13%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V  Y  CG     + V++++        N L+  + K    D A +   ++     +P+
Sbjct: 95  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H+T   +L  CG L +   G   H       + S   + NAL+ MY +CG +E+A  +F+
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214

Query: 278 GLVQR---NVISWTAIINGFKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVA--LAS 328
            + QR   +VISW +I++   +  +    L    ++  ++ E   +      ++   L +
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C SL+        H   I+ G     FVG A++D Y+  G +  A K    M +    VS
Sbjct: 275 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVS 333

Query: 389 WNAQIAGF------------FRNQKTE-----------------------EAIEAFSQMV 413
           WNA +AG+            F+N + E                       EA+  F QM+
Sbjct: 334 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF----------ESNVHVGSSLI 463
            + +  +  T  S+L AC+ L + +   +IH+  +K+            + ++ V ++LI
Sbjct: 394 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 453

Query: 464 EAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIR 519
           + Y+KC S++ A  +F    L   +VV+W  MI  ++Q G +  A+ LF +M+ E  G+ 
Sbjct: 454 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 513

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEI 576
           P   T   +L AC+H   ++ G+++   +++ +    E + Y   +C++D+  + G ++ 
Sbjct: 514 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY--ESSAYFVANCLIDMYSKCGDVDT 571

Query: 577 A 577
           A
Sbjct: 572 A 572



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 171/374 (45%), Gaps = 34/374 (9%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL--------------------QYL 250
           G+DV P+H+  +++L  C S + +    Q+H Q +                       ++
Sbjct: 32  GVDVYPSHF--ASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPFI 86

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S  ++   ++  Y+ CG  + A  V E +     + W  +I    + G  +  + + C M
Sbjct: 87  SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 146

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
              G  P+ +T    L +C  L +   G  FH  +   G     F+  A+V MYS  G +
Sbjct: 147 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 206

Query: 371 WEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQMV------RNDAACDEF 422
            EA     E+ +      +SWN+ ++   ++     A++ FS+M         +   D  
Sbjct: 207 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 266

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +  +IL AC  L ++   +++H   +++    +V VG++LI+AY KCG  E+A +VF+ +
Sbjct: 267 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 326

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN+M+  YSQ+G    A  LF+ M  E I     T+ AV++  S  G   +  
Sbjct: 327 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 386

Query: 543 KVFESMVKEYGILP 556
            +F  M+   G LP
Sbjct: 387 NLFRQMIFS-GSLP 399


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 180/565 (31%), Positives = 308/565 (54%), Gaps = 8/565 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG + H+L  +     D ++ + L+ +Y++CG + +   V ++M   D+     L++   
Sbjct: 128 LGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALC 187

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N    +A     ++    +QPN +T ++MLA C  +     G+Q+H   +K+       
Sbjct: 188 RNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMI----GEQIHGYMLKVMGSQSVY 243

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            S AL+  Y + G  + AE+VFE L  +NV+SW +++    + G  E  LR+   M  + 
Sbjct: 244 ASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEA 303

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           ++PNE+ F++AL +C S+    +G   H   IK  +     V  A++ MY   G + E +
Sbjct: 304 VEPNEFAFSIALGACGSV---CLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVE 360

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
             L ++ ++   VSW A I+  F+N  +E+A+    QM       +++ +SS L +C+ L
Sbjct: 361 AVLGKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADL 419

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             L    Q+H   +K   +  V  G++LI  Y+KCG    A   F  +   DV+SWNS+I
Sbjct: 420 ALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLI 479

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
              +Q+G A   +  F +M   G +P +STF+AVL  C+H+GLV++G+  F  M   YG+
Sbjct: 480 HGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGL 539

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P  +HY+CM+D+LGR G+ + AL  I N+P +P   IW+ L A+C+ H +L + +  + 
Sbjct: 540 TPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATD 599

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           +++EL   D+A YV +SN+YA      DAE  R+ M    + K+ G SWIEV N++  F 
Sbjct: 600 KLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFV 659

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIED 699
           +++ SHS+   +Y+ L +L+  ++D
Sbjct: 660 ARDTSHSDSASIYQMLAELVVVMQD 684



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 192/383 (50%), Gaps = 10/383 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +   + +  +MP  ++ +    ++G  +N   + A + F  +    V  N +  + 
Sbjct: 54  KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113

Query: 224 MLAICGSLSAIDE--GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
            LA C +  A     G+Q+H+  ++  + +   + + L+ +Y +CG M  AE VF  +  
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEA 173

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            +V+ +T++++   ++GD  + + ++C M   G+ PNE+T T  LA C  +    +G   
Sbjct: 174 PDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQI 229

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H  ++K   +   +  TA++D YS  G+   A+   + +  S + VSW + +    R+ +
Sbjct: 230 HGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENL-DSKNVVSWCSMMQLCIRDGR 288

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            E+A+  FS+M+      +EF +S  L AC    S+    QIH   +K    +++ V ++
Sbjct: 289 LEDALRVFSEMISEAVEPNEFAFSIALGACG---SVCLGRQIHCSAIKCNLMTDIRVSNA 345

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L+  Y + G   + E V  ++   D+VSW + I A  QNG + KA+ L  +M  EG  P 
Sbjct: 346 LLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPN 405

Query: 522 NSTFLAVLSACSHSGLVQDGQKV 544
           +  F + LS+C+   L+  G+++
Sbjct: 406 DYAFSSGLSSCADLALLDQGRQL 428



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 163/315 (51%), Gaps = 11/315 (3%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++NV++WT  I+G  ++G  E    +   M E G+  N+
Sbjct: 49  LDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAAND 108

Query: 320 Y--TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +     +A  + A      +G   H+  ++ G A   ++G+ ++++YS  G +W A++  
Sbjct: 109 FACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVF 168

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           + M ++   V + + ++   RN     A+E   QM+R     +E T +S+L  C  +   
Sbjct: 169 RRM-EAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRMIG- 226

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              EQIH  ++K     +V+  ++LI+ Y++ G ++ AE VF  L + +VVSW SM++  
Sbjct: 227 ---EQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLC 283

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
            ++GR   A+ +F +M+ E + P    F   L AC   G V  G+++  S +K   ++ +
Sbjct: 284 IRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIK-CNLMTD 339

Query: 558 EAHYSCMVDLLGRAG 572
               + ++ + GR+G
Sbjct: 340 IRVSNALLSMYGRSG 354



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 16/251 (6%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC--EQIH 444
           V+W   I+G  RN + E A   F+ M+ +  A ++F  ++ L AC+   + A    EQ+H
Sbjct: 74  VAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVH 133

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           S  V++ F ++  +GS LIE Y++CGS   AE VF ++ A DVV + S++ A  +NG   
Sbjct: 134 SLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLA 193

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ +  +M+ +G++P   T  ++L+ C        G+++   M+K  G     A  + +
Sbjct: 194 RAVEVLCQMMRQGLQPNEHTMTSMLAECPR----MIGEQIHGYMLKVMGSQSVYAS-TAL 248

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC----RCHSDLKM-AEFISKQILEL 619
           +D   R G  ++A     NL  K     W  +   C    R    L++ +E IS+ +   
Sbjct: 249 IDFYSRYGDFDMAETVFENLDSKNVVS-WCSMMQLCIRDGRLEDALRVFSEMISEAV--- 304

Query: 620 DPDDAAVYVTL 630
           +P++ A  + L
Sbjct: 305 EPNEFAFSIAL 315


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 206/702 (29%), Positives = 340/702 (48%), Gaps = 85/702 (12%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + + C   +S L+ +    VL  C+  + L  G++ H++I    V  D+ +   LV++
Sbjct: 84  NAMELVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSL 143

Query: 162 YAKCGDIKSMVAVVKQMP----YL------------------------------------ 181
           YA CGD+K    V   M     YL                                    
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPES 203

Query: 182 -----------DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                      D+ S N +++GY  N L ++    + ++  + +  +  T  ++L  C +
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              +  GK +H+  +K  +  +   SN LL MY KCG ++ A  VFE + +RNV+SWT++
Sbjct: 264 SGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ + G  +  +RL+  M ++G+  +    T  L +CA   +   G   H  +    M
Sbjct: 324 IAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               FV  A++DMY+  G +  A      M      +SWN  I                 
Sbjct: 384 ESNLFVCNALMDMYTKCGSMDGANSVFSTM-VVKDIISWNTMIG---------------- 426

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
                +   D  T + IL AC+ L +L   ++IH  I+++ + S+ HV ++L++ Y KCG
Sbjct: 427 -----ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
               A  +F  + + D+VSW  MI  Y  +G   +AI  F +M   GI P   +F+++L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSHSGL++ G + F  M  ++ I P+  HY+CMVDLL R G L  A  FI  LPI P A
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            IW  L   CR + D+++AE +++++ EL+P++   YV L+N+YAEA    + +  R+ +
Sbjct: 602 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 661

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIGH------- 702
             K + K PGCSWIE+  K+  F S  N SH    K+   LK++ +++++ G+       
Sbjct: 662 GKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 721

Query: 703 ----TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                + +KE  +  HSE+LA+ FGL++LP +     ++ L 
Sbjct: 722 LINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLR 763


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 196/627 (31%), Positives = 325/627 (51%), Gaps = 16/627 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAV 174
           D   +  ++S C+  + + LG   H+L   + + C    + A LVNMY+  G +    ++
Sbjct: 245 DVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA-LVNMYSTAGKLDEAESL 303

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSA 233
            + M   D+ S N +++ Y ++    +A     +L   D   PN  T+S+ L  C S  A
Sbjct: 304 FRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEA 363

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G+ +HA  ++    +   + N+LLTMY KC  MED E VFE +   +V+S   +  G
Sbjct: 364 LMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGG 423

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH-MGYMFHAQVIKRGMAL 352
           +    D    +R+   MR  GI PN  T      +C SL + H  G   HA V + G+  
Sbjct: 424 YAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLS 483

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            +++  +++ MY+  G++ E+   +     + S +SWNA IA   R+ + EEAI+ F   
Sbjct: 484 DEYITNSLITMYATCGDL-ESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  D F  +  L + + L SL    Q+H   VK+  + + HV ++ ++ Y KCG  
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           +   +            WN++I  Y++ G  ++A   F+ MV  G +P   TF+A+LSAC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GL+  G   + SM   +G+ P   H  C+VDLLGR GK   A  FI  +P+ P   I
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           WR L ++ R H +L +    +K +LELDP D + YV LSN+YA      D ++ R  MK 
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKT 782

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---------- 702
            +++K P CSW+++ N++  F   ++SH    K+Y KL +++ ++ ++G+          
Sbjct: 783 IKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHD 842

Query: 703 TDNEKEDRVLY-HSERLAVGFGLISLP 728
           TD E+++  L+ HSE+LA+ +GL+ +P
Sbjct: 843 TDEEQKEHNLWNHSEKLALAYGLLVVP 869



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 239/497 (48%), Gaps = 9/497 (1%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VP++ ++L SL      +    +   +E    G   HAL  +  + G+ ++  +L+++Y 
Sbjct: 37  VPLSGFALASL------VTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYG 90

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
             G + +   +  +MP  ++ S   ++   + N   ++A   + ++    V  N    +T
Sbjct: 91  SRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALAT 150

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ++++CG+L     G Q+ A  +    L+  +V+N+L+TM+     ++DAE +F+ + +R+
Sbjct: 151 VVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERD 210

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            ISW A+I+ +     Y K   ++  MR   + P+  T    ++ CAS     +G   H+
Sbjct: 211 RISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHS 270

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G+     +  A+V+MYS  G++ EA+   + M +    +SWN  I+ + ++    
Sbjct: 271 LCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRR-DVISWNTMISSYVQSNSCV 329

Query: 404 EAIEAFSQMVRND-AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           EA+E   Q+++ D    +  T+SS L ACS   +L     IH+ I++   ++ + +G+SL
Sbjct: 330 EALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSL 389

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y+KC S ED ERVF  +   DVVS N +   Y+       A+ +F  M   GI+P  
Sbjct: 390 LTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNY 449

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            T + +   C   G +        + V + G+L +E   + ++ +    G LE +    S
Sbjct: 450 ITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFS 509

Query: 583 NLPIKPTAPIWRPLFAA 599
            +  K     W  + AA
Sbjct: 510 RINNKSVIS-WNAIIAA 525


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 198/636 (31%), Positives = 342/636 (53%), Gaps = 16/636 (2%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            +K   I +L+ CS  E L+ GR+ H+LI T+     +  V   LV+MY KCG I     V
Sbjct: 436  NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELV 495

Query: 175  VKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
             K+MP     + + N +L  YA+N    +AF   +++    V P+  +++++L+ C    
Sbjct: 496  FKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---Y 552

Query: 233  AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               E + L    ++  Y S   +  AL++M+ +C  +E A SVF  +   +V+SWTA+++
Sbjct: 553  CSQEAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVS 611

Query: 293  GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
               ++ D+++   L   M+ +G+ P+++T    L +C +     +G + HA V + G+  
Sbjct: 612  ATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEA 671

Query: 353  GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
               V  A+++MYS  G+ W       E  K+   VSWN   A + +    +EA+  F QM
Sbjct: 672  DIAVENALLNMYSNCGD-WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQM 730

Query: 413  VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                   D+ T+S+ L        ++  +  H+   +S  +S+V V + L++ Y KCG  
Sbjct: 731  QLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKL 790

Query: 473  EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            ++A  +F       VV  N++I A +Q+G + +A+ +F KM  EG+RP  +T ++++SAC
Sbjct: 791  DEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISAC 850

Query: 533  SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             H+G+V++G   F +M + +GI P   HY+C VDLLGRAG+LE A   I  +P +    +
Sbjct: 851  GHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLV 910

Query: 593  WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            W  L   C+   D ++ E  +++ILELDP ++A +V LSN+Y   G   DA+  RK M  
Sbjct: 911  WTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLD 970

Query: 653  KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY---EKLKQLMQQI-----EDIGHTD 704
            + +   PG SW E+  +++ F + ++SH +  ++Y   +KL+ LM++      + +   D
Sbjct: 971  ENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGLDVED 1030

Query: 705  NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              KE  + YHSER+A+ FGLI+ P +   +  + L 
Sbjct: 1031 ELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLR 1066



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 234/496 (47%), Gaps = 16/496 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D Q    +L  C     L  G+  H LI    +    F+   L+NMY +CG ++   A+ 
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +M   ++ S   L++  A+   F +AF+ F   L      PN YT   ML  C +   +
Sbjct: 84  SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 235 DEGKQLHAQT--MKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
             G+ +HA    + L+  S TA  V NA++ MY KCG +EDA +VF  + +++V+SWTA+
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAM 203

Query: 291 INGFKQHGD-YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
              + Q    Y   LR+   M    + PN  TF  AL +C SLR+   G   H+ + +  
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAS 260

Query: 350 MALGDFVGTAIVDMYSGLGEIWE-AKKQLKEMG--KSASSVSWNAQIAGFFRNQKTEEAI 406
           +        A+++MY   G+ WE A    K M   +    VSWNA I+      +  +A+
Sbjct: 261 LGFDPLASNALINMYGKCGD-WEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLP-SLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
             F ++       +  T  +IL A +            H RI +S +  +V +G+++I  
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISM 379

Query: 466 YNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y KCG +  A  VF ++    DV+SWN+M+ A        K +  F  M++ GI P   +
Sbjct: 380 YAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+A+L+ACS+S  +  G+K+   ++       E +  + +V + G+ G +  A +    +
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEM 499

Query: 585 PIKPTAPI-WRPLFAA 599
           P+   + + W  +  A
Sbjct: 500 PLPSRSLVTWNVMLGA 515



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 11/199 (5%)

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
           + S  VR D A D   Y+++L++C     LA  +  H  I  +  E ++ +G+ LI  Y 
Sbjct: 12  SLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYV 71

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFL 526
           +CGS E+A  +FS++   +VVSW ++I A +Q G   +A  LF  M++E     NS T +
Sbjct: 72  RCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLV 131

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS------CMVDLLGRAGKLEIALIF 580
           A+L+AC++S  +  G+ +  +M+ E G+  E A  +       M+++  + G LE A+  
Sbjct: 132 AMLNACANSRDLAIGRSI-HAMIWELGL--ERASTTATLVGNAMINMYAKCGSLEDAIAV 188

Query: 581 ISNLPIKPTAPIWRPLFAA 599
              +P K     W  +  A
Sbjct: 189 FLAIPEKDVVS-WTAMAGA 206


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 204/652 (31%), Positives = 328/652 (50%), Gaps = 50/652 (7%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK-QMPYLDIASCNCLLAGYAKN 196
           + H+LI    +      +A L+  YA   D  S  +V +   P  ++   N ++     N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            LF +A S + +   I +QP+ YT+ +++  C  L   +  K +H + + + + S   + 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL----VCLMRE 312
           NAL+ MY +   ++ A  VFE +  R+V+SW ++I+G+  +G + + L +    + L  E
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 313 --DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             +   P+  T T  L +C  L +   G   H  +I  G          +++MY+  G +
Sbjct: 214 MVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND--------AAC--- 419
             +++    M K   SVSWN+ I  + +N K  ++++ F  M   D        A+C   
Sbjct: 274 LASQEVFSGM-KCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332

Query: 420 --------------------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
                               D  T  SIL  CSLL +    ++IH  I K   ES+V VG
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 392

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + LIE Y+KCGS  ++ +VF  +   DVV+W ++I A    G  +KA+  F +M   GI 
Sbjct: 393 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 452

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P +  F+A++ ACSHSGLV++G   F  M K+Y I P   HY+C+VDLL R+  L+ A  
Sbjct: 453 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 512

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           FI ++P+KP + IW  L +ACR   D ++AE +S++I+EL+PDD   YV +SN+YA  G 
Sbjct: 513 FILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGK 572

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
                  RK +K + + K+PGCSW+E+ NK+Y F +  K   +  +V + L  L   +  
Sbjct: 573 WDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAK 632

Query: 700 IGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            G+  N           EK D +  HSERLA+ FGL++       +  + L 
Sbjct: 633 EGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLR 684



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 211/480 (43%), Gaps = 74/480 (15%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+     E+ +  H  +       D ++  +L++MY +  D+     V ++MP  D
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180

Query: 183 IASCNCLLAGYAKNALFDQAFSFF-----LKLDGID-VQPNHYTYSTMLAICGSLSAIDE 236
           + S N L++GY  N  +++A   +     L ++ ++  +P+  T +++L  CG L  ++ 
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEF 240

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H   +   Y   T  SN L+ MY KCG +  ++ VF G+  ++ +SW ++IN + Q
Sbjct: 241 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 300

Query: 297 HG-------------------------------DYEKPLRLVCLMREDGIDPNEYTFTVA 325
           +G                               D    LR++  MR +G+ P+  T    
Sbjct: 301 NGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSI 360

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L  C+ L     G   H  + K G+     VG  +++MYS  G +  + +  K M K+  
Sbjct: 361 LPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM-KTKD 419

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+W A I+      + ++A+ AF +M       D   + +I+ ACS           HS
Sbjct: 420 VVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACS-----------HS 468

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            +V+         G +      K   ++   R+       D++S ++++       +A  
Sbjct: 469 GLVEE--------GLNYFHRMKK--DYKIEPRIEHYACVVDLLSRSALLD------KAED 512

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
            I+         ++P +S + A+LSAC  SG  +  ++V E +++   + P++  Y  +V
Sbjct: 513 FILSMP------LKPDSSIWGALLSACRMSGDTEIAERVSERIIE---LNPDDTGYYVLV 563



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 31/242 (12%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  +L  C     LE G+  H  +  +    D   +  L+NMYAKCG++ +   V   M 
Sbjct: 225 ITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMK 284

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-------------------------- 213
             D  S N ++  Y +N     +   F  +   D                          
Sbjct: 285 CKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISR 344

Query: 214 -----VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
                V P+  T  ++L +C  L+A  +GK++H    KL   S   V N L+ MY KCG 
Sbjct: 345 MRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGS 404

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + ++  VF+ +  ++V++WTA+I+    +G+ +K +R    M   GI P+   F   + +
Sbjct: 405 LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFA 464

Query: 329 CA 330
           C+
Sbjct: 465 CS 466



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 84/194 (43%), Gaps = 4/194 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ +L  CS       G+  H  I K  +  D  V   L+ MY+KCG +++   V 
Sbjct: 353 DMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVF 412

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K M   D+ +   L++         +A   F +++   + P+H  +  ++  C     ++
Sbjct: 413 KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVE 472

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG   +   MK  Y  +  + +   ++ +  +  +++ AE     + ++ +   W A+++
Sbjct: 473 EGLN-YFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLS 531

Query: 293 GFKQHGDYEKPLRL 306
             +  GD E   R+
Sbjct: 532 ACRMSGDTEIAERV 545



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 119/314 (37%), Gaps = 60/314 (19%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +SSI +A +   +     ++HS I+      +V   + LI  Y     + D    FS   
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKY---AHFRDPTSSFSVFR 72

Query: 484 AA----DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            A    +V  WNS+I+A + NG   +A+ L+ +     ++P   TF +V++AC  +GL+ 
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLLD 130

Query: 540 -DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI------------ 586
            +  K     V + G   +    + ++D+  R   L+ A      +P+            
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190

Query: 587 ----------------------------KPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
                                       KP       +  AC    DL+  +++   ++ 
Sbjct: 191 YNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 250

Query: 619 LDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
              + D      L NMYA+ G    ++E    MK K+       SW    N +   + QN
Sbjct: 251 SGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD-----SVSW----NSMINVYIQN 301

Query: 678 KSHSEMPKVYEKLK 691
               +  KV+E +K
Sbjct: 302 GKMGDSLKVFENMK 315


>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 172/529 (32%), Positives = 306/529 (57%), Gaps = 34/529 (6%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC-- 266
           LD +D +P+  TYST+L +C  L A+DEG ++HA T    ++    +SN +L MYIKC  
Sbjct: 81  LDHVD-RPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNS 139

Query: 267 -----------------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                                        G +++A  +F+ + +R+  SWTA+ +G+ +H
Sbjct: 140 LVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRH 199

Query: 298 GDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
             +E+ L L   + R +    N++T + ALA+ A++++ H+G   H  +++ G+ L   V
Sbjct: 200 DQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVV 259

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            +A+ DMY   G I EA+  + +       VSW A I  +F+  + EE    FS ++++ 
Sbjct: 260 WSALSDMYGKCGSIGEAR-HIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSG 318

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +EFT+S +L AC+   +    +Q+H  + +  F+ +    S+L+  Y KCG+ ++A 
Sbjct: 319 IWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNAR 378

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF+ +   D+VSW S+I  Y+QNG+  +A+  FE ++  G +P + TF+ VLSAC+H+G
Sbjct: 379 RVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAG 438

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV  G + F+S+ +++G+     HY+C++DLL R+G+L+ A   I  +PI+P   +W  L
Sbjct: 439 LVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASL 498

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
              CR H +LK+A+  ++ + E++P++ A Y TL+N+YA AGL     E RK+M  + + 
Sbjct: 499 LGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVV 558

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           K+PG SWIE+  +++ F   + SH++  +++E L +L +++++ G+  +
Sbjct: 559 KKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPD 607



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 219/488 (44%), Gaps = 45/488 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C +   L+ G + HA    +       ++  +++MY KC  + +   +  +M   D
Sbjct: 95  LLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERD 154

Query: 183 IASCNCLLAGYAK-------NALFDQA-----FSFFLKLDGI------------------ 212
           + S N +++GYAK         LFDQ      FS+     G                   
Sbjct: 155 LCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQR 214

Query: 213 --DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             + + N +T S+ LA   ++ ++  GK++H   +++       V +AL  MY KCG + 
Sbjct: 215 HENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIG 274

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A  +F+  V R+V+SWTA+I+ + + G  E+   L   + + GI PNE+TF+  L +CA
Sbjct: 275 EARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACA 334

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                 +G   H  + + G     F  + +V MY+  G I  A++    M +    VSW 
Sbjct: 335 DHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPR-PDLVSWT 393

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVK 449
           + I+G+ +N + +EA++ F  ++++    D  T+  +L AC+    +    E   S   K
Sbjct: 394 SLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEK 453

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGR----AR 504
                     + LI+  ++ G  ++AE +  ++    D   W S++     +G      R
Sbjct: 454 HGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKR 513

Query: 505 KAIILFEKMVVEGIRPTNSTFLA-VLSACSHSGLVQDGQKVFES--MVKEYGILPEEAHY 561
            A  LFE   +E   P   T LA + +     G V + +KV ++  +VK+ G+   E   
Sbjct: 514 AAEALFE---IEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKR 570

Query: 562 SCMVDLLG 569
              V L+G
Sbjct: 571 EVHVFLVG 578


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 323/619 (52%), Gaps = 12/619 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYL 181
           V+  C+R   LE GR  H+   +  + G +  T  SL+  YAK G +     V   MP  
Sbjct: 113 VVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR 172

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           DI + N ++ GY  N L   A   F ++ +G+ VQ +       LA C   SA+ +G+++
Sbjct: 173 DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREV 232

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++        V  +LL MY KCG +  AE +F  +  R V++W  +I G+  +G  
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCP 292

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+       M+ +G      T    LA+CA   +S  G   H  V +        + TA+
Sbjct: 293 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETAL 352

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           ++MYS +G++  ++    +M  + + VSWN  IA +   +   EAI  F +++      D
Sbjct: 353 LEMYSKVGKVKSSETIFGQM-TNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPD 411

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            FT S+++ A  LL  L  C Q+HS IV+  +  N  V ++++  Y +CG    + ++F 
Sbjct: 412 YFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFD 471

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   DV+SWN++I  Y+ +G+ + A+ +F +M   G++P  STF++VL+ACS SG+  +
Sbjct: 472 KMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADE 531

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   F  M ++YGI+P+  HY CM DLLGRAG L   L FI ++PI PT  IW  L  A 
Sbjct: 532 GWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTAS 591

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R  +D+ +AE+ +++I EL+ D+   YV LS+MYA+AG   D +  R  M  K + +   
Sbjct: 592 RNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDA 651

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY------- 713
            S +E++     F + + +H +   ++E    L ++I +  +  N  +   L        
Sbjct: 652 RSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGETDYPRNLSDPISLTSRRTIIP 711

Query: 714 --HSERLAVGFGLISLPAK 730
             HS RLAV FGLIS  A+
Sbjct: 712 NKHSVRLAVVFGLISSEAR 730



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 207/407 (50%), Gaps = 20/407 (4%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           SLV  +A  G +   +A V+  P  D    N ++ G+A   L + A + +  +     +P
Sbjct: 48  SLVLSHAAAGRMHDALAAVRSSP--DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARP 105

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESV 275
           + +T+  ++  C  L A++EG+  H+  ++L  + S+    N+LL  Y K GM+ DAE V
Sbjct: 106 DRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERV 165

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL--------MREDGIDPNEYTFTVALA 327
           F+G+  R++++W ++++G+  +G     L L C         ++ DG+         ALA
Sbjct: 166 FDGMPVRDIVTWNSMVDGYVSNG--LGALALDCFREMHEGLQVQHDGVG-----IIAALA 218

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +C        G   HA VI+ G+     VGT+++DMY   G I  A+     M  S + V
Sbjct: 219 ACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATM-PSRTVV 277

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +WN  I G+  N   EEA + F QM       +  T  ++L AC+   S      +H  +
Sbjct: 278 TWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYV 337

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
            +S+F  +V + ++L+E Y+K G  + +E +F Q+T   +VSWN+MI AY       +AI
Sbjct: 338 TRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAI 397

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYG 553
            LF +++ + + P   T  AV+ A    GL++  +++   +V+ +YG
Sbjct: 398 TLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYG 444



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 167/351 (47%), Gaps = 9/351 (2%)

Query: 89  DSFPDGFIDDGCSNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALI 143
           +S  DG++ +G    + + C+      L+   D   +I  L+ C  +  L  GR  HA +
Sbjct: 178 NSMVDGYVSNGL-GALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYV 236

Query: 144 TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
            +  +  D  V  SL++MY KCG I S   +   MP   + + NC++ GYA N   ++AF
Sbjct: 237 IRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             F+++     Q    T   +LA C    +   G+ +H    + Q+L    +  ALL MY
Sbjct: 297 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMY 356

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            K G ++ +E++F  +  + ++SW  +I  +     Y + + L   +    + P+ +T +
Sbjct: 357 SKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMS 416

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-GK 382
             + +   L         H+ +++        V  A++ MY+  G++  ++K   +M GK
Sbjct: 417 AVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK 476

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
               +SWN  I G+  + + + A+E FS+M  N    +E T+ S+L ACS+
Sbjct: 477 DV--ISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSV 525


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 182/578 (31%), Positives = 329/578 (56%), Gaps = 8/578 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G +  +L  K+ +  + F  ++L+++YAKCG ++    V   MP  +  S N L+AGY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++     A   FL+++   + P+  T++++L      S      QLH + +K        
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLT 229

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRL-VCLMRE 312
           V NA +T Y +CG ++D+  +F+G+   R++ISW A++  +  +G  ++ ++  V +M+E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289

Query: 313 DGIDPNEYTFTVALASCASL-RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-- 369
            G+ P+ Y+FT  ++SC+    + H G + H  VIK  +     V  A++ MY+   E  
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349

Query: 370 -IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + +A K    +     +VSWN+ + G+ ++  + +A++ F  M   +   DE+ +S+ L
Sbjct: 350 MMEDAYKCFNSL-VLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAAL 408

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++ S L  L   +QIH  ++ S F SN  V SSLI  Y+K G  +DA + F +   +  V
Sbjct: 409 RSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSV 468

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            WN+MI  Y+Q+G+A    ILF +M+       + TF+ ++++CSH+GLV +G ++  +M
Sbjct: 469 PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTM 528

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             +YG+     HY+C VDL GRAG+L+ A   I ++P +P A +W  L  ACR H ++++
Sbjct: 529 ETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVEL 588

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           A  ++  +   +P   + YV LS+MY+  G+ +D    +++MK + +SK PG SWIEV N
Sbjct: 589 ASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKN 648

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
           +++ F +++KSH +M ++YE L+ L+Q  + + + ++E
Sbjct: 649 EVHSFNAEDKSHPKMDEIYEMLRVLLQVEQMLSNCEDE 686



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 6/297 (2%)

Query: 257 NALLTMYIKCG--MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           N LLT Y +     +  A  VF+ + +R+ +SW A++      G + +  RL+  M   G
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  N +    AL S A  R   +G    +  +K G+A   F  +A++D+Y+  G + +A+
Sbjct: 89  LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +    M +  ++VSWNA IAG+  +     A+E F +M R   A DE T++S+L A    
Sbjct: 149 QVFDGMPER-NTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE-G 206

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSM 493
           PS     Q+H +IVK      + V ++ I AY++CGS +D+ R+F  +    D++SWN+M
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266

Query: 494 IKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           + AY+ NG   +A+  F +M+ E G+ P   +F +++S+CS  G      +V   +V
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG++ H L+  +    + FV++SL+ MY+K G I       ++         N ++ G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA++   +     F ++       +H T+  ++  C     +DEG ++   TM+ +Y   
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVP 535

Query: 253 TAVSNAL--LTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
             + +    + +Y + G ++ A+ + + +  + + + W  ++   + HG+ E
Sbjct: 536 LRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 188/604 (31%), Positives = 322/604 (53%), Gaps = 18/604 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNM--YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           ++ HA + +T +  D F  + +V      + G ++    V  Q+P     +CN ++ G  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
              L  +A  F+ ++    + P+ YT+ ++   C + S   EGKQ+H  + KL + S T 
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTY 121

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMRED 313
             N L+ MY  CG +  A  VF+ +  + V+SW  +I    Q     + +RL   +M+ +
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            + PNE T    L +CA  R+  M    H  + + G      + T ++D+Y   G + + 
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCV-QL 240

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            + L +  +  +  SWN  I G   +   EEA+  F +M       D+ T +S+L AC+ 
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L +L   + +H+ I K + + +V +G++L++ Y KCGS E A +VF ++   DV++W ++
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I   +  G+A  A+  F++M ++G++P   TF+ VL+ACSH+G V +G   F SM   YG
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P   HY  +VD+LGRAG++  A   I ++P+ P   +   L  ACR H +L+ AE  +
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAA 480

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
           KQ+LE+DP  +  YV LSN+Y  +    +A+  R+LM  + + K PGCS IEV+  ++ F
Sbjct: 481 KQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEF 540

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGF 722
              + SH +  ++ E L+ ++ ++++ G+            + EKE  +  HSE+LA+ F
Sbjct: 541 VKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAF 600

Query: 723 GLIS 726
           GL+S
Sbjct: 601 GLLS 604



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 2/298 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ H   TK     D +   +L+NMY+ CG + S   V  +M    + S   ++  +A+
Sbjct: 104 GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQ 163

Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
               ++A   F + +   +V+PN  T   +L  C     +   K++H    +  +     
Sbjct: 164 WDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVV 223

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           ++  L+ +Y KCG ++ A  +F+   ++N+ SW  +ING  +  +YE+ L L   M+  G
Sbjct: 224 LNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKG 283

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I  ++ T    L +C  L    +G   HA + K+ + +   +GTA+VDMY+  G I  A 
Sbjct: 284 IKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAI 343

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +   EM +    ++W A I G     + E A++ F +M       D  T+  +L ACS
Sbjct: 344 QVFHEMPEK-DVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACS 400



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 168/361 (46%), Gaps = 39/361 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL+ C+R   L + +R H  I +        +   L+++Y KCG ++    +  +  
Sbjct: 190 LVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQ 249

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N ++ G+ +++ +++A   F ++    ++ +  T +++L  C  L A++ GK 
Sbjct: 250 EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKW 309

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHA   K +     A+  AL+ MY KCG +E A  VF  + +++V++WTA+I G    G 
Sbjct: 310 LHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQ 369

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT- 358
            E  L+    M   G+ P+  TF   LA+C     SH G++   + I    ++ D  G  
Sbjct: 370 AENALQYFDEMHIKGVKPDAITFVGVLAAC-----SHAGFV--DEGISHFNSMSDTYGIQ 422

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
             ++ Y GL +I         +G++              R  + EE I++         A
Sbjct: 423 PTIEHYGGLVDI---------LGRAG-------------RIAEAEELIKSMPM------A 454

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAER 477
            D+F    +L AC +  +L   E+   ++++   + S  +V  S I  Y     WE+A+R
Sbjct: 455 PDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNI--YKSSKKWEEAKR 512

Query: 478 V 478
            
Sbjct: 513 T 513



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 6/205 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  +  +L  C+    LELG+  HA I K  +  D  +  +LV+MYAKCG I++ + V 
Sbjct: 287 DKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF 346

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  D+ +   L+ G A     + A  +F ++    V+P+  T+  +LA C     +D
Sbjct: 347 HEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVD 406

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG   H  +M   Y  +  + +   L+ +  + G + +AE + + + +  +      ++ 
Sbjct: 407 EGIS-HFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLG 465

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDP 317
             + HG+ E   R    + E  IDP
Sbjct: 466 ACRIHGNLEAAERAAKQLLE--IDP 488


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 317/593 (53%), Gaps = 28/593 (4%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    L+LG++ H L  K     D ++  +L+NMY+  G ++S   + + +P  D    
Sbjct: 272 CAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLW 331

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAIDEGKQLHAQTM 245
           N +++ YA     ++A   F+++    V+ +  T   ML++C  L S + +GK LHA  +
Sbjct: 332 NSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVI 391

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           K       ++ NALL+MY +   +E  + +F+ +   ++ISW  +I    ++    +   
Sbjct: 392 KSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACE 451

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   MRE  I PN YT    LA+C  +     G   H  V+K  + +   + TA+ DMY 
Sbjct: 452 LFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYM 511

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G+   A+  L E       +SWNA I                       A  +  T  
Sbjct: 512 NCGDEATAR-DLFEGCPDRDLISWNAMIX---------------------KAEPNSVTII 549

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFES--NVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           ++L + + L +L   + +H+ + +  F    ++ + ++ I  Y +CGS + AE +F  L 
Sbjct: 550 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 609

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             +++SWN+MI  Y  NGR   A++ F +M+ +G RP   TF++VLSACSHSG ++ G +
Sbjct: 610 KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 669

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SMV+++ + PE  HYSC+VDLL R G ++ A  FI ++PI+P A +WR L ++CR +
Sbjct: 670 LFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAY 729

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
           SD K A+ I +++ +L+P +A  YV LSN+YA AGL  +    R  +K K + K PG SW
Sbjct: 730 SDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 789

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSE 716
           I V N+++ F + ++SH +  K+Y KL  L+  + + G+   + + R ++H E
Sbjct: 790 IIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGY---DPDLRWVFHEE 839



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 213/431 (49%), Gaps = 4/431 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+ +  +E G+  H  I  T +  D  V  ++V+ Y KCG ++    V   M   D
Sbjct: 66  VLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRD 125

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N ++ GY     +++A     ++   +++PN  T   +L  C   S +  G+ +H 
Sbjct: 126 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 185

Query: 243 QTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++   + S   V+ AL+  Y++   M     +F+ +V RN++SW A+I+G+   GDY 
Sbjct: 186 YCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYF 244

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           K L L   M  D +  +  T  VA+ +CA L +  +G   H   IK       ++  A++
Sbjct: 245 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 304

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS  G + E+  QL E   +  +  WN+ I+ +      EEA++ F +M       DE
Sbjct: 305 NMYSNNGSL-ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 363

Query: 422 FTYSSILKACSLLPS-LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            T   +L  C  L S L   + +H+ ++KS    +  +G++L+  Y +    E  +++F 
Sbjct: 364 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 423

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   D++SWN+MI A ++N    +A  LFE+M    I+P + T +++L+AC     +  
Sbjct: 424 RMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDF 483

Query: 541 GQKVFESMVKE 551
           G+ +   ++K 
Sbjct: 484 GRSIHGYVMKH 494



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 182/355 (51%), Gaps = 7/355 (1%)

Query: 200 DQA-FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
           DQA  S + +++ + V PN+ T   +L  C + +A++ GK +H        +    V  A
Sbjct: 41  DQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTA 100

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           ++  Y KCG +EDA  VF+ +  R+V+ W A++ G+   G YE+ + LV  M  + + PN
Sbjct: 101 VVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPN 160

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQL 377
             T    L +C       +G   H   ++ GM   +  V TA++  Y  L         L
Sbjct: 161 SRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY--LRFDMRVLPLL 218

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++    + VSWNA I+G++      +A+E F QM+ ++   D  T    ++AC+ L SL
Sbjct: 219 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 278

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +QIH   +K +F  ++++ ++L+  Y+  GS E + ++F  +   D   WNSMI AY
Sbjct: 279 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 338

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH--SGLVQDGQKVFESMVK 550
           +  G   +A+ LF +M  EG++    T + +LS C    SGL++ G+ +   ++K
Sbjct: 339 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIK 392



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 234/534 (43%), Gaps = 33/534 (6%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAV 174
           + + ++ +L  C     L LGR  H    +  +   +  V  +L+  Y +  D++ +  +
Sbjct: 160 NSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLL 218

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   +I S N +++GY     + +A   F+++   +V+ +  T    +  C  L ++
Sbjct: 219 FDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSL 278

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             GKQ+H   +K +++    + NALL MY   G +E +  +FE +  R+   W ++I+ +
Sbjct: 279 KLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAY 338

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM-GYMFHAQVIKRGMALG 353
              G +E+ + L   M+ +G+  +E T  + L+ C  L +  + G   HA VIK GM + 
Sbjct: 339 AAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRID 398

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +G A++ MY+ L  +   +K    M K    +SWN  I    RN    +A E F +M 
Sbjct: 399 ASLGNALLSMYTELNCVESVQKIFDRM-KGVDIISWNTMILALARNTLRAQACELFERMR 457

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            ++   + +T  SIL AC  +  L     IH  ++K   E N  + ++L + Y  CG   
Sbjct: 458 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 517

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A  +F      D++SWN+MI          KA             P + T + VLS+ +
Sbjct: 518 TARDLFEGCPDRDLISWNAMIX---------KA------------EPNSVTIINVLSSFT 556

Query: 534 HSGLVQDGQKVFESMVKE-YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           H   +  GQ +   + +  + +  + +  +  + +  R G L+ A      LP K     
Sbjct: 557 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP-KRNIIS 615

Query: 593 WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLS----NMYAEAGLQ 640
           W  + A    +     A     Q+LE    P+       LS    + + E GLQ
Sbjct: 616 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQ 669



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 2/157 (1%)

Query: 389 WNAQIAGFFRNQKTEEAI-EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           WN+ I     N K ++AI  A++QM       +  T   +LKAC+   ++   + IH  I
Sbjct: 28  WNSVIK-HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 86

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
             +    +V VG+++++ Y KCG  EDA  VF  ++  DVV WN+M+  Y   G   +A+
Sbjct: 87  QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 146

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           +L  +M  E +RP + T +A+L AC  +  ++ G+ V
Sbjct: 147 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGV 183


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 190/628 (30%), Positives = 327/628 (52%), Gaps = 45/628 (7%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+ +    GD      +   +P  D  +C+ L++    + L ++A   +  L    ++P+
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
              +      C         K++H    +   +S   V NAL+  Y KC  +E A  VF+
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            LV R+V+SWT++ + + + G   K + +   M   G+ PN  T +  L +CA L++   
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM----------------- 380
           G   H   ++ GM +  FV +A+V +Y+    + EA+     M                 
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257

Query: 381 -----------------GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
                            G  A   +WNA I G   N ++EEA+E F +M +     +E T
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SSIL ACS   +L   ++IH  + +     ++   ++L+  Y KCG    +  VF  + 
Sbjct: 318 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 377

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             DVV+WN+MI A + +G  ++A+ LF+KM++  ++P + TF  VLS CSHS LV++G +
Sbjct: 378 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 437

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SM +++ + P+  HYSC+VD+  RAG+L  A  FI  +P++PTA  W  L AACR +
Sbjct: 438 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 497

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++A+  +K++ E++P++   YV+L N+   A + ++A + R LMK + I+K PGCSW
Sbjct: 498 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 557

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TD--------NEKEDRVL 712
           ++V NK++ F   +KS+ E  K+Y  L +L+++++  G+   TD         EK + + 
Sbjct: 558 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 617

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LAV FG+++L  ++     + L 
Sbjct: 618 NHSEKLAVAFGILNLNGQSTIRVFKNLR 645



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 71/432 (16%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +  H   T+  V  D FV  +L++ Y KC  ++    V   +   D+ S   L + Y K 
Sbjct: 98  KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 157

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +    F ++    V+PN  T S++L  C  L  +  GK++H   ++   +    V 
Sbjct: 158 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVC 217

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI- 315
           +AL+++Y KC  + +A  VF+ +  R+V+SW  ++  + ++ +YEK   L   M  DG+ 
Sbjct: 218 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 277

Query: 316 ----------------------------------DPNEYTFTVALASCASLRNSHMGYMF 341
                                              PNE T +  L +C+   N  MG   
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 337

Query: 342 HAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H  V  R   +GD    TA++ MY+  G++    + + +M +    V+WN  I     + 
Sbjct: 338 HCYVF-RHWKVGDLTSTTALLYMYAKCGDL-NLSRNVFDMMRRKDVVAWNTMIIANAMHG 395

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +EA+  F +M+ +    +  T++ +L  CS           HSR+V+           
Sbjct: 396 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS-----------HSRLVEEG--------- 435

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             ++ +N  G           L   D   ++ ++  YS+ GR  +A    + M +E   P
Sbjct: 436 --VQIFNSMGR--------DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME---P 482

Query: 521 TNSTFLAVLSAC 532
           T S + A+L+AC
Sbjct: 483 TASAWGALLAAC 494



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 58/323 (17%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +L  C+  + L+ G+  H    +  +  + FV ++LV++YAKC  ++    V   MP
Sbjct: 182 VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP 241

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDV----------------------- 214
           + D+ S N +L  Y KN  +++ FS FLK+  DG+                         
Sbjct: 242 HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 301

Query: 215 ----------QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
                     +PN  T S++L  C     +  GK++H    +   +     + ALL MY 
Sbjct: 302 MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 361

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG +  + +VF+ + +++V++W  +I     HG+ ++ L L   M    + PN  TFT 
Sbjct: 362 KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 421

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------------TAIVDMYSGLGEIWE 372
            L+ C+           H+++++ G+ + + +G            + +VD+YS  G + E
Sbjct: 422 VLSGCS-----------HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 470

Query: 373 AKKQLKEMGKSASSVSWNAQIAG 395
           A K ++ M    ++ +W A +A 
Sbjct: 471 AYKFIQGMPMEPTASAWGALLAA 493



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS  E L +G+  H  + +    GD   T +L+ MYAKCGD+     V   M   D
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++   A +    +A   F K+    VQPN  T++ +L+ C     ++EG Q+  
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIF- 439

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
            +M   +L +   ++   ++ +Y + G + +A    +G+ ++    +W A++   + + +
Sbjct: 440 NSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKN 499

Query: 300 YE 301
            E
Sbjct: 500 VE 501



 Score = 45.8 bits (107), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 447 IVKSKFESNV--HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           +V     +N+  H+G  LI      G +  A ++F  +   D  + +++I A + +G + 
Sbjct: 1   MVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSN 60

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +AI ++  +   GI+P    FLA   AC+ SG
Sbjct: 61  EAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 92


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 182/578 (31%), Positives = 329/578 (56%), Gaps = 8/578 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G +  +L  K+ +  + F  ++L+++YAKCG ++    V   MP  +  S N L+AGY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++     A   FL+++   + P+  T++++L      S      QLH + +K        
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLT 229

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRL-VCLMRE 312
           V NA +T Y +CG ++D+  +F+G+   R++ISW A++  +  +G  ++ ++  V +M+E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289

Query: 313 DGIDPNEYTFTVALASCASL-RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-- 369
            G+ P+ Y+FT  ++SC+    + H G + H  VIK  +     V  A++ MY+   E  
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349

Query: 370 -IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + +A K    +     +VSWN+ + G+ ++  + +A++ F  M   +   DE+ +S+ L
Sbjct: 350 MMEDAYKCFNSL-VLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAAL 408

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++ S L  L   +QIH  ++ S F SN  V SSLI  Y+K G  +DA + F +   +  V
Sbjct: 409 RSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSV 468

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            WN+MI  Y+Q+G+A    ILF +M+       + TF+ ++++CSH+GLV +G ++  +M
Sbjct: 469 PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTM 528

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             +YG+     HY+C VDL GRAG+L+ A   I ++P +P A +W  L  ACR H ++++
Sbjct: 529 ETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVEL 588

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           A  ++  +   +P   + YV LS+MY+  G+ +D    +++MK + +SK PG SWIEV N
Sbjct: 589 ASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWIEVKN 648

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
           +++ F +++KSH +M ++YE L+ L+Q  + + + ++E
Sbjct: 649 EVHSFNAEDKSHPKMDEIYEMLRVLLQVEQMLSNCEDE 686



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 6/297 (2%)

Query: 257 NALLTMYIKCG--MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           N LLT Y +     +  A  VF+ + +R+ +SW A++      G + +  RL+  M   G
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           +  N +    AL S A  R   +G    +  +K G+A   F  +A++D+Y+  G + +A+
Sbjct: 89  LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +    M +  ++VSWNA IAG+  +     A+E F +M R   A DE T++S+L A    
Sbjct: 149 QVFDGMPER-NTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE-G 206

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSM 493
           PS     Q+H +IVK      + V ++ I AY++CGS +D+ R+F  +    D++SWN+M
Sbjct: 207 PSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAM 266

Query: 494 IKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           + AY+ NG   +A+  F +M+ E G+ P   +F +++S+CS  G      +V   +V
Sbjct: 267 LGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLV 323



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG++ H L+  +    + FV++SL+ MY+K G I       ++         N ++ G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA++   +     F ++       +H T+  ++  C     +DEG ++   TM+ +Y   
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVP 535

Query: 253 TAVSNAL--LTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
             + +    + +Y + G ++ A+ + + +  + + + W  ++   + HG+ E
Sbjct: 536 LRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 193/598 (32%), Positives = 318/598 (53%), Gaps = 4/598 (0%)

Query: 113 SLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            ++  QF    ++  CS    + LGR+ HA + K+          +L++MY K   I   
Sbjct: 159 GVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDA 218

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICG 229
           + V  +M   D+ S   ++AG+++     +A  +F ++   G+ + PN + + ++ + C 
Sbjct: 219 LDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYL-PNEFIFGSVFSACS 277

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           SL   + G+QLH  ++K           +L  MY KCG++  A  VF  + + ++++W A
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNA 337

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           II GF   GD ++ +     MR  G+ P+E T    L +C S    + G   H  + K G
Sbjct: 338 IIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG 397

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           + L   V   ++ MY+   E+ +A    +EM  +A  VSWNA +    R+ + EE     
Sbjct: 398 LDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLL 457

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M  +    D  T +++L A +   S+    Q+H   +K+    +  V + LI+ Y KC
Sbjct: 458 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKC 517

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           GS + A ++F  +   DVVSW+S+I  Y+Q G   +A+ LF+ M    ++P + TF+ VL
Sbjct: 518 GSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVL 577

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH GLV++G K++ +M KE+GI P   H SCMVDLL RAG L  A  FI  +   P 
Sbjct: 578 TACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPD 637

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
             +W+ L AAC+ H ++ + +  ++ IL++DP ++A +V L N+YA  G   D    R L
Sbjct: 638 IVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSL 697

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           MK + + K PG SWIEV ++I+ FF ++  H E  K+Y  L++L+ Q+ D G+   +K
Sbjct: 698 MKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQMLDAGYVPFQK 755



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 241/479 (50%), Gaps = 11/479 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++S CS    LE G++ H  + K+    D  +   ++NMY KC  +K    V   MP  +
Sbjct: 69  LISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERN 128

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++AGY++N     A  F+ ++    V P+ +T+ +++  C SL  I  G+QLHA
Sbjct: 129 VVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHA 188

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K ++ +     NAL++MY K  ++ DA  VF  +  R++ISW ++I GF Q G YE 
Sbjct: 189 HVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG-YE- 246

Query: 303 PLRLVCLMRE---DGID-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            L  +C  +E    G+  PNE+ F    ++C+SL     G   H   IK G+    F G 
Sbjct: 247 -LEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGC 305

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           ++ DMY+  G +  A+    ++G+    V+WNA IAGF      +EAI  FSQM      
Sbjct: 306 SLCDMYAKCGLLSCARVVFYQIGR-PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            DE T  S+L AC+    L    Q+H  I K   + +V V ++L+  Y KC    DA   
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFF 424

Query: 479 FSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           F ++   AD+VSWN+++ A  ++ +A +   L + M +   RP   T   VL A + +  
Sbjct: 425 FEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVS 484

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           ++ G +V    +K  G+  + +  + ++DL  + G L+ A     ++ I P    W  L
Sbjct: 485 IEIGNQVHCYALKT-GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSL 541



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 218/455 (47%), Gaps = 14/455 (3%)

Query: 185 SCNCLLAGYAKNALFDQA---FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           S N  +    K  LF++A   F F  K  G  +  + Y Y  +++ C  L +++ GK++H
Sbjct: 29  SSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAY--LISACSYLRSLEHGKKIH 86

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K +      + N +L MY KC  ++DA+ VF+ + +RNV+SWT++I G+ Q+G   
Sbjct: 87  DHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGG 146

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             L     M + G+ P+++TF   + +C+SL +  +G   HA V+K           A++
Sbjct: 147 NALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALI 206

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-D 420
            MY+    I +A      M  +   +SW + IAGF +     EA+  F +M+       +
Sbjct: 207 SMYTKSNLIIDALDVFSRMA-TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPN 265

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           EF + S+  ACS L       Q+H   +K     +V  G SL + Y KCG    A  VF 
Sbjct: 266 EFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFY 325

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q+   D+V+WN++I  ++  G A++AI  F +M  +G+ P   T  ++L AC+    +  
Sbjct: 326 QIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQ 385

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G +V    + + G+  +    + ++ +  +  +L  A+ F   +        W  +  AC
Sbjct: 386 GMQV-HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTAC 444

Query: 601 RCHSDLKMAEFISKQ--ILELDPDDAAVYVTLSNM 633
             H   +    + K   I +  PD    Y+TL+N+
Sbjct: 445 MRHDQAEEVFRLLKLMCISQHRPD----YITLTNV 475


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 190/628 (30%), Positives = 327/628 (52%), Gaps = 45/628 (7%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+ +    GD      +   +P  D  +C+ L++    + L ++A   +  L    ++P+
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
              +      C         K++H    +   +S   V NAL+  Y KC  +E A  VF+
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            LV R+V+SWT++ + + + G   K + +   M   G+ PN  T +  L +CA L++   
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM----------------- 380
           G   H   ++ GM +  FV +A+V +Y+    + EA+     M                 
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343

Query: 381 -----------------GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
                            G  A   +WNA I G   N ++EEA+E F +M +     +E T
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SSIL ACS   +L   ++IH  + +     ++   ++L+  Y KCG    +  VF  + 
Sbjct: 404 ISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMR 463

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             DVV+WN+MI A + +G  ++A+ LF+KM++  ++P + TF  VLS CSHS LV++G +
Sbjct: 464 RKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQ 523

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F SM +++ + P+  HYSC+VD+  RAG+L  A  FI  +P++PTA  W  L AACR +
Sbjct: 524 IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVY 583

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++A+  +K++ E++P++   YV+L N+   A + ++A + R LMK + I+K PGCSW
Sbjct: 584 KNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSW 643

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TD--------NEKEDRVL 712
           ++V NK++ F   +KS+ E  K+Y  L +L+++++  G+   TD         EK + + 
Sbjct: 644 LQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLC 703

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
            HSE+LAV FG+++L  ++     + L 
Sbjct: 704 NHSEKLAVAFGILNLNGQSTIRVFKNLR 731



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 71/432 (16%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +  H   T+  V  D FV  +L++ Y KC  ++    V   +   D+ S   L + Y K 
Sbjct: 184 KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKC 243

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
               +    F ++    V+PN  T S++L  C  L  +  GK++H   ++   +    V 
Sbjct: 244 GFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVC 303

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI- 315
           +AL+++Y KC  + +A  VF+ +  R+V+SW  ++  + ++ +YEK   L   M  DG+ 
Sbjct: 304 SALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 363

Query: 316 ----------------------------------DPNEYTFTVALASCASLRNSHMGYMF 341
                                              PNE T +  L +C+   N  MG   
Sbjct: 364 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 423

Query: 342 HAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H  V  R   +GD    TA++ MY+  G++    + + +M +    V+WN  I     + 
Sbjct: 424 HCYVF-RHWKVGDLTSTTALLYMYAKCGDL-NLSRNVFDMMRRKDVVAWNTMIIANAMHG 481

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +EA+  F +M+ +    +  T++ +L  CS           HSR+V+           
Sbjct: 482 NGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS-----------HSRLVEEG--------- 521

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
             ++ +N  G           L   D   ++ ++  YS+ GR  +A    + M +E   P
Sbjct: 522 --VQIFNSMGR--------DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME---P 568

Query: 521 TNSTFLAVLSAC 532
           T S + A+L+AC
Sbjct: 569 TASAWGALLAAC 580



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 58/323 (17%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +L  C+  + L+ G+  H    +  +  + FV ++LV++YAKC  ++    V   MP
Sbjct: 268 VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP 327

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDV----------------------- 214
           + D+ S N +L  Y KN  +++ FS FLK+  DG+                         
Sbjct: 328 HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 387

Query: 215 ----------QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
                     +PN  T S++L  C     +  GK++H    +   +     + ALL MY 
Sbjct: 388 MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 447

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG +  + +VF+ + +++V++W  +I     HG+ ++ L L   M    + PN  TFT 
Sbjct: 448 KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 507

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------------TAIVDMYSGLGEIWE 372
            L+ C+           H+++++ G+ + + +G            + +VD+YS  G + E
Sbjct: 508 VLSGCS-----------HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNE 556

Query: 373 AKKQLKEMGKSASSVSWNAQIAG 395
           A K ++ M    ++ +W A +A 
Sbjct: 557 AYKFIQGMPMEPTASAWGALLAA 579



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS  E L +G+  H  + +    GD   T +L+ MYAKCGD+     V   M   D
Sbjct: 407 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 466

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++   A +    +A   F K+    VQPN  T++ +L+ C     ++EG Q+  
Sbjct: 467 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIF- 525

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
            +M   +L +   ++   ++ +Y + G + +A    +G+ ++    +W A++   + + +
Sbjct: 526 NSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKN 585

Query: 300 YE 301
            E
Sbjct: 586 VE 587



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 447 IVKSKFESNV--HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           +V     +N+  H+G  LI      G +  A ++F  +   D  + +++I A + +G + 
Sbjct: 87  MVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSN 146

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +AI ++  +   GI+P    FLA   AC+ SG
Sbjct: 147 EAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 178


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 178/578 (30%), Positives = 309/578 (53%), Gaps = 1/578 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  CS  +  +L R+ HA + K+    D     +L++MY K   +   + V  ++   D
Sbjct: 205 IVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKD 264

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S   ++AG+++     +A   F ++    V QPN + + +  + C  L   D G+Q+H
Sbjct: 265 LISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIH 324

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K    S      +L  MY KCG +E A +VF  + + ++++W AII GF    + +
Sbjct: 325 GLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAK 384

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           +       MR  G+ PN+ T    L +C+     + G   H+ ++K G  L   V  +++
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLL 444

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS    + +A +  +++G  A  VSWN  +    +  +  E +     M  +    D 
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T +++L +   + S     QIH  I+KS    ++ V ++LI  Y KCGS E A ++F  
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D++SW+S+I  Y+Q G  ++A  LF  M   G++P   TF+ +L+ACSH G+V++G
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            K++ +M ++Y I P + H SCMVDLL RAG L++A  FI  +P  P   +W+ L AAC+
Sbjct: 625 LKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACK 684

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L++ +  ++ +L++DP ++A  V L N++A +G   D    R  M+  ++ K PG 
Sbjct: 685 VHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQ 744

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           SWIE+ +K++ F +++  H E  K+Y  L++LM QI D
Sbjct: 745 SWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILD 782



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 231/461 (50%), Gaps = 10/461 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +++ CS    LE GR+ H  +       D  +   +++MY KCG +K    +   MP  
Sbjct: 103 HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLK 162

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   +++GY++    D A + ++++      P+H+T+ +++  C  L      +QLH
Sbjct: 163 NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLH 222

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K ++ +     NAL++MY K   M DA +VF  ++ +++ISW ++I GF Q G YE
Sbjct: 223 AHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLG-YE 281

Query: 302 KPLRLVCLMRE----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             L  +C  RE        PNE+ F  A ++C+ L     G   H   IK G+    F G
Sbjct: 282 --LEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG 339

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++ DMY+  G +  A+     + K    V+WNA IAGF      +E+   FSQM     
Sbjct: 340 CSLCDMYAKCGFLESARTVFYHIEK-PDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T  S+L ACS    L    Q+HS IVK  F  ++ V +SL+  Y+KC +  DA +
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458

Query: 478 VFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           VF  +   AD+VSWN+++ A  Q  +A + + L + M    I+P + T   VL +     
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             + G ++    + + G+  + +  + ++++  + G LE A
Sbjct: 519 SYEVGSQI-HCFIMKSGLNLDISVSNALINMYTKCGSLECA 558



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 214/447 (47%), Gaps = 11/447 (2%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +AF  F K     ++    TY+ ++  C SL +++ G+++H   +   Y     + N +L
Sbjct: 83  KAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           +MY KCG +++A ++F+ +  +NV+SWT++I+G+ ++G+ +  + L   M   G  P+ +
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF   + SC+ L +  +    HA V+K           A++ MY+   ++ +A      +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLAT 439
                 +SW + IAGF +     EA+  F +M+       +EF + S   ACS L     
Sbjct: 261 -IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDC 319

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             QIH   +K    S++  G SL + Y KCG  E A  VF  +   D+V+WN++I  ++ 
Sbjct: 320 GRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFAS 379

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
              A+++   F +M   G+ P + T L++L ACS   ++  G +V   +VK  G   +  
Sbjct: 380 VSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK-MGFNLDIP 438

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-- 617
             + ++ +  +   L  AL    ++  K     W  L  AC   +       ++K +   
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAE 644
            + PD    +VTL+N+   +G  A  E
Sbjct: 499 RIKPD----HVTLTNVLVSSGQIASYE 521



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 48/375 (12%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V+ +L  CS    L  G + H+ I K     D  V  SL++MY+KC ++   + V + + 
Sbjct: 405 VLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIG 464

Query: 180 -YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              DI S N LL    +     +       +    ++P+H T + +L   G +++ + G 
Sbjct: 465 NKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGS 524

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   MK       +VSNAL+ MY KCG +E A  +F+ +   ++ISW+++I G+ Q G
Sbjct: 525 QIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAG 584

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG- 357
             ++   L   MR  G+ PNE TF   L +C     SH+G +     + R M     +  
Sbjct: 585 CGKEAFELFRTMRGLGVKPNEITFVGILTAC-----SHIGMVEEGLKLYRTMQEDYRISP 639

Query: 358 -----TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
                + +VD+ +  G +  A+  +++M      V W   +A      K    +E   + 
Sbjct: 640 TKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAAC----KVHGNLEVGKRA 695

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             N    D    ++++  C                       N+H  S         G W
Sbjct: 696 AENVLKIDPSNSAAVVMLC-----------------------NIHASS---------GHW 723

Query: 473 EDAERVFSQLTAADV 487
           +D  R+ S +   DV
Sbjct: 724 KDFARLRSSMRRMDV 738


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 198/611 (32%), Positives = 332/611 (54%), Gaps = 17/611 (2%)

Query: 130 EECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           E+ L  GR  H  I +T +   +  ++  LVNMYAKCG I     V + +   D  S N 
Sbjct: 387 EDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNT 446

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +++   +N   + A   +  +    + P+++   + L+ C SL  +  G+Q+H   +K  
Sbjct: 447 IISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWG 506

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF-KQHGDYEKPLRLV 307
               T+VSNAL+ MY  CG   ++  +F  + + +++SW +I+      H    + + + 
Sbjct: 507 LDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVF 566

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
             M   G+ PN+ TF   L++ + L    +G   HA V+K G    + V  A++  Y+  
Sbjct: 567 SNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKS 626

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G++   ++    M     +VSWN+ I+G+  N   +E ++    M+ ++   D  T+S +
Sbjct: 627 GDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIV 686

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           L AC+ + +L    ++H+  ++S+ ES+V V S+L++ Y+KCG  + A +VF+ ++  + 
Sbjct: 687 LNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNE 746

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
            SWNSMI  Y+++G   KA+ +FE+M   G  P + TF++VLSACSH+GLV  G   FE 
Sbjct: 747 FSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFE- 805

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD-- 605
           M++++GILP   HYSC++DLLGRAGKL     +I+ +P+KP   IWR +  ACR   D  
Sbjct: 806 MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGD 865

Query: 606 -LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
            + + +  S+ +LEL+P +   YV  SN YA  G   D  + R  M    + KE G SW+
Sbjct: 866 RIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWV 925

Query: 665 EVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---TDNEKEDRVL--------Y 713
            + + ++ F + ++SH    ++YEKL  L+Q+I++ G+   T+    D           Y
Sbjct: 926 TLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSY 985

Query: 714 HSERLAVGFGL 724
           HSE+LAV F L
Sbjct: 986 HSEKLAVAFVL 996



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 223/453 (49%), Gaps = 22/453 (4%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           R H  + K  +  D F++  LVN+YAK   + +   V   M   +  S  CL++GY  + 
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 198 LFDQAFSFF--LKLDGIDV-QPNHYTYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYLSK 252
           + D+AF  F  +  +G +  +P  +T+ ++L  C       +    Q+H    K  Y S 
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 253 TAVSNALLTMYIKC--GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           T V NAL++MY  C  G+   A+ VF+    R++I+W A+++ + + G       L   M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 311 REDG----IDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGTAIVDMY 364
             D     + PNE+TF  +L +  SL +   G +    A+V+K G +   +VG+A+V  +
Sbjct: 257 LHDDSAIELRPNEHTFG-SLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAF 315

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           +  G + EAK     + K  ++V+ N  I G  +   +EEA+  F    R+    +  T+
Sbjct: 316 ARHGMLDEAKDIFINL-KERNAVTLNGLIVGLVKQHCSEEAVGIF-MGTRDSFVVNTDTF 373

Query: 425 SSILKACS--LLP--SLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVF 479
             +L A +   +P   L    ++H  I+++   +  + + + L+  Y KCG+ + A RVF
Sbjct: 374 VVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVF 433

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             L A D VSWN++I    QNG    A++ +  M    I P+N   ++ LS+C+   L+ 
Sbjct: 434 RLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLT 493

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
            GQ+V    VK +G+  + +  + +V + G  G
Sbjct: 494 AGQQVHCDAVK-WGLDLDTSVSNALVKMYGDCG 525



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 139/580 (23%), Positives = 269/580 (46%), Gaps = 47/580 (8%)

Query: 58  RAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID-DGCSNTVPVTCYSLESLLD 116
           + GL+    + N  +N+  KG SR   +     F DG ++ +  S T  V+ Y L  + D
Sbjct: 84  KRGLTHDLFLSNHLVNLYAKG-SR--LAAARQVF-DGMLERNAVSWTCLVSGYVLSGITD 139

Query: 117 KQFVI--------------------EVLSYC--SREECLELGRRYHALITKTAVCGDQFV 154
           + F +                     VL  C  +  + L    + H L++KT    +  V
Sbjct: 140 EAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTV 199

Query: 155 TASLVNMYAKCGDIKSMVA--VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--- 209
             +L++MY  C     + A  V    P  D+ + N L++ YAK       F+ F+ +   
Sbjct: 200 CNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHD 259

Query: 210 -DGIDVQPNHYTYSTMLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
              I+++PN +T+ +++    SLS+   G   Q+ A+ +K    S   V +AL++ + + 
Sbjct: 260 DSAIELRPNEHTFGSLIT-ATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARH 318

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGF-KQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           GM+++A+ +F  L +RN ++   +I G  KQH   E     + +   D    N  TF V 
Sbjct: 319 GMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAV--GIFMGTRDSFVVNTDTFVVL 376

Query: 326 LASCASLRNSHMGYM----FHAQVIKRGMA-LGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           L++ A       G M     H  +++ G+  L   +   +V+MY+  G I +A +  + +
Sbjct: 377 LSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLL 436

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
             +   VSWN  I+   +N   E A+  +  M +   +   F   S L +C+ L  L   
Sbjct: 437 C-ARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAG 495

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY-SQ 499
           +Q+H   VK   + +  V ++L++ Y  CG+  ++  +F+ +   D+VSWNS++    S 
Sbjct: 496 QQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSS 555

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +    +++ +F  M+  G+ P   TF+ +LSA S   +++ G++V  ++V ++G + + A
Sbjct: 556 HAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQV-HAVVLKHGAIEDNA 614

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
             + ++    ++G ++      S++  +  A  W  + + 
Sbjct: 615 VDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISG 654



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 9/317 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I  LS C+    L  G++ H    K  +  D  V+ +LV MY  CG       +   M  
Sbjct: 480 ISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAE 539

Query: 181 LDIASCNCLL----AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            DI S N ++    + +A  A   + FS  ++     + PN  T+  +L+    LS ++ 
Sbjct: 540 HDIVSWNSIMGVMVSSHAPTAESVEVFSNMMR---SGLTPNKVTFVNLLSALSPLSVLEL 596

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFK 295
           GKQ+HA  +K   +   AV NAL++ Y K G M+  E +F  +  +R+ +SW ++I+G+ 
Sbjct: 597 GKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYI 656

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G  ++ +  V LM       +  TF++ L +CAS+     G   HA  I+  +     
Sbjct: 657 YNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVV 716

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V +A++DMYS  G I  A K    M +  +  SWN+ I+G+ R+   E+A+E F +M RN
Sbjct: 717 VESALLDMYSKCGRIDYASKVFNSMSQK-NEFSWNSMISGYARHGLGEKALEIFEEMQRN 775

Query: 416 DAACDEFTYSSILKACS 432
            A  D  T+ S+L ACS
Sbjct: 776 GACPDHVTFVSVLSACS 792



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 23/286 (8%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K   + +LS  S    LELG++ HA++ K     D  V  +L++ YAK GD+ S   + 
Sbjct: 577 NKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLF 636

Query: 176 KQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             M    D  S N +++GY  N    +       +   +   +  T+S +L  C S++A+
Sbjct: 637 SSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAAL 696

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G ++HA  ++ Q  S   V +ALL MY KCG ++ A  VF  + Q+N  SW ++I+G+
Sbjct: 697 ERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGY 756

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +HG  EK L +   M+ +G  P+  TF   L++C+           HA ++ RG+   +
Sbjct: 757 ARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACS-----------HAGLVDRGLDYFE 805

Query: 355 FVG-----------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            +            + ++D+    G++ + ++ +  M    +++ W
Sbjct: 806 MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIW 851



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 156/316 (49%), Gaps = 14/316 (4%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           ++LH + +K        +SN L+ +Y K   +  A  VF+G+++RN +SWT +++G+   
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135

Query: 298 GDYEKPLRLVCLMREDGID---PNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMAL 352
           G  ++  R+   M  +G +   P  +TF   L +C       + +    H  V K   A 
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195

Query: 353 GDFVGTAIVDMYSG--LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              V  A++ MY    +G   +A +Q+ +       ++WNA ++ + +          F 
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQA-QQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254

Query: 411 QMVRNDAAC----DEFTYSSILKACSLLP-SLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
            M+ +D+A     +E T+ S++ A SL   S    +Q+ +R++KS   S+++VGS+L+ A
Sbjct: 255 AMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           + + G  ++A+ +F  L   + V+ N +I    +   + +A+ +F       +  T+ TF
Sbjct: 315 FARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTD-TF 373

Query: 526 LAVLSACSHSGLVQDG 541
           + +LSA +   + +DG
Sbjct: 374 VVLLSAVAEFSIPEDG 389



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
           A  E++H  +VK     ++ + + L+  Y K      A +VF  +   + VSW  ++  Y
Sbjct: 73  AAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGY 132

Query: 498 SQNGRARKAIILFEKMVVEG---IRPTNSTFLAVLSACSHSG 536
             +G   +A  +F+ M+ EG    RPT  TF +VL AC  +G
Sbjct: 133 VLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAG 174


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 200/675 (29%), Positives = 340/675 (50%), Gaps = 70/675 (10%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV---VKQM 178
            VL  C        G  +H LI       + F+  +LV MY++CG ++    +   + Q 
Sbjct: 167 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 226

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI------DVQPNHYTYSTMLAICGSLS 232
              D+ S N +++ + K++    A   F K+  I      + + +  +   +L  CGSL 
Sbjct: 227 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 286

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+ + K++H   ++        V NAL+  Y KCG+ME+A  VF  +  ++V+SW A++ 
Sbjct: 287 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 346

Query: 293 GFKQHGDYEKPLRLVCLMREDGID-----------------------------------P 317
           G+ Q G++E    L   MR++ I                                    P
Sbjct: 347 GYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLP 406

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL--GDFVG--------TAIVDMYSGL 367
           N  T    L++CASL     G   HA  +K  +     DF G         A++DMYS  
Sbjct: 407 NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKC 466

Query: 368 GEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN--DAACDEFTY 424
                A+    ++  +  + V+W   I G  +   + +A++ F +M+      A + +T 
Sbjct: 467 RSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTI 526

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGSSLIEAYNKCGSWEDAERVFSQL 482
           S IL AC+ L ++   +QIH+ +++  ++ES+ + V + LI+ Y+KCG  + A  VF  +
Sbjct: 527 SCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSM 586

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +    +SW SM+  Y  +GR  +A+ +F+KM   G  P + TFL VL ACSH G+V  G 
Sbjct: 587 SQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL 646

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+SM  +YG+ P   HY+C +DLL R+G+L+ A   + ++P++PTA +W  L +ACR 
Sbjct: 647 SYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRV 706

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           HS++++AE    +++E++ ++   Y  +SN+YA AG   D    R LMK   I K PGCS
Sbjct: 707 HSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           W++       FF  ++SH   P++Y  L+ L+ +I+ +G+            + EK + +
Sbjct: 767 WVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEEKNNLL 826

Query: 712 LYHSERLAVGFGLIS 726
           + HSE+LA+ +GL++
Sbjct: 827 VEHSEKLALAYGLLT 841



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 219/510 (42%), Gaps = 97/510 (19%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C   + +   +  H    +     D FV  +L++ YAKCG +++ V V   M 
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGIDVQ----------------- 215
           + D+ S N ++AGY+++  F+ AF  F       + LD +                    
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394

Query: 216 -----------PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS----------KTA 254
                      PN  T  ++L+ C SL A  +G ++HA ++K   L+             
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 454

Query: 255 VSNALLTMYIKCGMMEDAESVFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           V NAL+ MY KC   + A S+F+   L +RNV++WT +I G  Q+GD    L+L   M  
Sbjct: 455 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 514

Query: 313 D--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK--RGMALGDFVGTAIVDMYSGLG 368
           +  G+ PN YT +  L +CA L    +G   HA V++  R  +   FV   ++DMYS  G
Sbjct: 515 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 574

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A+     M +  S++SW + + G+  + +  EA++ F +M +     D+ T+  +L
Sbjct: 575 DVDTARHVFDSMSQK-SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVL 633

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS                                    CG  +     F  ++A   +
Sbjct: 634 YACS-----------------------------------HCGMVDQGLSYFDSMSADYGL 658

Query: 489 S-----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           +     +   I   +++GR  KA    + M +E   PT   ++A+LSAC     V+  + 
Sbjct: 659 TPRAEHYACAIDLLARSGRLDKAWRTVKDMPME---PTAVVWVALLSACRVHSNVELAEH 715

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
               +V+       +  Y+ + ++   AG+
Sbjct: 716 ALNKLVEMNA--ENDGSYTLISNIYATAGR 743



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 217/481 (45%), Gaps = 64/481 (13%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V  Y  CG     + V++++        N L+  + K    D A +   ++     +P+
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H+T   +L  CG L +   G   H       + S   + NAL+ MY +CG +E+A  +F+
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221

Query: 278 GLVQR---NVISWTAIINGFKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVA--LAS 328
            + QR   +VISW +I++   +  +    L    ++  ++ E   +      ++   L +
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C SL+        H   I+ G     FVG A++D Y+  G +  A K    M +    VS
Sbjct: 282 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVS 340

Query: 389 WNAQIAGF------------FRNQKTE-----------------------EAIEAFSQMV 413
           WNA +AG+            F+N + E                       EA+  F QM+
Sbjct: 341 WNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF----------ESNVHVGSSLI 463
            + +  +  T  S+L AC+ L + +   +IH+  +K+            + ++ V ++LI
Sbjct: 401 FSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 460

Query: 464 EAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIR 519
           + Y+KC S++ A  +F    L   +VV+W  MI  ++Q G +  A+ LF +M+ E  G+ 
Sbjct: 461 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 520

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEI 576
           P   T   +L AC+H   ++ G+++   +++ +    E + Y   +C++D+  + G ++ 
Sbjct: 521 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY--ESSAYFVANCLIDMYSKCGDVDT 578

Query: 577 A 577
           A
Sbjct: 579 A 579



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 171/374 (45%), Gaps = 34/374 (9%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL--------------------QYL 250
           G+DV P+H+  +++L  C S + +    Q+H Q +                       ++
Sbjct: 39  GVDVYPSHF--ASLLKECKSANTV---HQIHQQIIASGLLSLPTPLLSVSLPALPSEPFI 93

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S  ++   ++  Y+ CG  + A  V E +     + W  +I    + G  +  + + C M
Sbjct: 94  SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRM 153

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
              G  P+ +T    L +C  L +   G  FH  +   G     F+  A+V MYS  G +
Sbjct: 154 LRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL 213

Query: 371 WEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQMV------RNDAACDEF 422
            EA     E+ +      +SWN+ ++   ++     A++ FS+M         +   D  
Sbjct: 214 EEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDII 273

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +  +IL AC  L ++   +++H   +++    +V VG++LI+AY KCG  E+A +VF+ +
Sbjct: 274 SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMM 333

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN+M+  YSQ+G    A  LF+ M  E I     T+ AV++  S  G   +  
Sbjct: 334 EFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEAL 393

Query: 543 KVFESMVKEYGILP 556
            +F  M+   G LP
Sbjct: 394 NLFRQMIFS-GSLP 406


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  338 bits (866), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 307/550 (55%), Gaps = 7/550 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVAVVKQMPYL 181
           +L  C++      G + HA + K+ +  D+FV  SL+ +Y K G D      V   +   
Sbjct: 65  LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 124

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S   +++GY +      +   F K+    V+PN +T S ++  C  L  +  G+  H
Sbjct: 125 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 184

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   + S   +++AL+ M+ +   ++DA  +F+ L++ + I WT+II+   ++  ++
Sbjct: 185 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 244

Query: 302 KPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + LR    M+ D G+ P+ +TF   L +C +L     G   HA+VI  G      V +++
Sbjct: 245 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 304

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY   G + E+++    M    +SVSW+A + G+ +N   +  I+ F +M + D  C 
Sbjct: 305 VDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYC- 362

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              + +IL+ C+ L ++   +++H + ++     +V V S+L++ Y KCG  E A+ +F 
Sbjct: 363 ---FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFD 419

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q+   ++++WNSMI  ++QNGR  +A+ +F +MV EGI+P   +F+ +L ACSH GLV +
Sbjct: 420 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 479

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ F SM K+YGI     HYSCMVDLLGRAG LE A I I     +  + +W  L  AC
Sbjct: 480 GREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGAC 539

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
              ++ ++AE I+K+++EL+PD    YV L+N+Y   G   DA   R+LMK + ++K PG
Sbjct: 540 TTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPG 599

Query: 661 CSWIEVYNKI 670
            SWIE  N +
Sbjct: 600 KSWIETKNNL 609



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 205/398 (51%), Gaps = 14/398 (3%)

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           K+     A      +D  ++      Y+++L  C  + A + G Q+HA  +K        
Sbjct: 36  KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95

Query: 255 VSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           V N+LLT+Y K G    +   VF+GL  ++VISWT++I+G+ + G     L L   M   
Sbjct: 96  VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 155

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G++PN +T +  + +C+ L +  +G +FH  V+ RG      + +A++DM+     + +A
Sbjct: 156 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 215

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSILKACS 432
           ++   E+     ++ W + I+   RN   +EA+  F  M R+   C D FT+ ++L AC 
Sbjct: 216 RQLFDEL-LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 274

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L  L   +++H++++ + F  NV V SSL++ Y KCGS  +++R+F ++   + VSW++
Sbjct: 275 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 334

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           ++  Y QNG  +  I +F KM     +     F  +L  C+    V+ G++V    +++ 
Sbjct: 335 LLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 390

Query: 553 G---ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G   ++ E A    +VDL  + G +E A      +P++
Sbjct: 391 GWRDVIVESA----LVDLYAKCGCIEYAQTIFDQMPVR 424


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 195/604 (32%), Positives = 320/604 (52%), Gaps = 18/604 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F + SLV+ Y + G +     V  +MP  D+ + N +L+G  +N     A +   ++ G 
Sbjct: 103 FASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGE 162

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T S++L +C  L        +H   +K     +  V NAL+ +Y K GM+ +A
Sbjct: 163 GVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEA 222

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF G+  R++++W +II+  +Q G     + L   M E G+ P+  T  V+LAS  + 
Sbjct: 223 HWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTL-VSLASAVAQ 281

Query: 333 RNSHMGYM-FHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
               +G    H  V +RG  +GD + G A+VDMY+ + +I  A+K    +      VSWN
Sbjct: 282 CGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNL-PDRDVVSWN 340

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACD-EFTYSSILKACSLLPSLATCEQIHSRIVK 449
             I G+ +N    EAI  ++ M  ++     + T+ S+L A S L  L    ++H+  +K
Sbjct: 341 TLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIK 400

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           +    +V+V + LI+ Y KCG   +A  +F  +       WN++I     +G   KA+ L
Sbjct: 401 TGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSL 460

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +M  E I+P + TF+++L+ACSH+GLV  G+  F+ M   YGI+P   HY+CMVD+LG
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+L+ A  FI ++PIKP + +W  L  ACR H +++M +  S+ + ELDP++   YV 
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 580

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS--QNKSHSEMPKVY 687
           +SNMYA+ G     +  R L++ + + K PG S +EV   +  F+S  Q + H +  ++ 
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQ 640

Query: 688 EKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECS 736
             L  L+ +++  G+            ++EKE  +  HSERLA+ FG+I+ P        
Sbjct: 641 RGLHDLLAKMKSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIY 700

Query: 737 RTLE 740
           + L 
Sbjct: 701 KNLR 704



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 24/258 (9%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           GD     ++V+MYAK   I +   V   +P  D+ S N L+ GY +N L ++A   +  +
Sbjct: 303 GDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDM 362

Query: 210 DGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
              + ++P   T+ ++L     L  + +G ++HA ++K        V+  L+ +Y KCG 
Sbjct: 363 HNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGK 422

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + +A  +FE + +R+   W AII G   HG   K L L   M+++ I P+  TF   LA+
Sbjct: 423 LVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAA 482

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTA------------IVDMYSGLGEIWEAKKQ 376
           C+           HA ++ +G +  D + T             +VDM    G++ EA + 
Sbjct: 483 CS-----------HAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEF 531

Query: 377 LKEMGKSASSVSWNAQIA 394
           ++ M     S  W A + 
Sbjct: 532 IQSMPIKPDSAVWGALLG 549



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 25/258 (9%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A ++F+  P R  +S + LI  GYM   + G++       ND                 
Sbjct: 323 AAQKVFDNLPDRDVVSWNTLI-TGYM---QNGLANEAIRIYND----------------- 361

Query: 107 TCYSLESLLDKQFV-IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
             ++ E L   Q   + VL   S    L+ G R HAL  KT +  D +VT  L+++YAKC
Sbjct: 362 -MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC 420

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G +   + + + MP       N ++AG   +    +A S F ++   +++P+H T+ ++L
Sbjct: 421 GKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLL 480

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRN 283
           A C     +D+G+        +  +   A     ++ M  + G +++A    + + ++ +
Sbjct: 481 AACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPD 540

Query: 284 VISWTAIINGFKQHGDYE 301
              W A++   + HG+ E
Sbjct: 541 SAVWGALLGACRIHGNVE 558



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 22/276 (7%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           D FT+  +++A    P  A+  Q+H+  ++      NV    SL+ AY + G   +A RV
Sbjct: 68  DSFTFPPLVRAA---PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   DV +WN+M+    +N RA  A+ L  +MV EG+     T  +VL  C     V
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMC-----V 179

Query: 539 QDGQKVFESMVKEY----GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
             G +    ++  Y    G+  E    + ++D+ G+ G L  A      + ++     W 
Sbjct: 180 VLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLV-TWN 238

Query: 595 PLFAACRCHSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADAEE-----QRK 648
            + +A      +  A  +   ++E     D    V+L++  A+ G +  A+      +R+
Sbjct: 239 SIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRR 298

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
              + +I    G + +++Y K+ +  +  K    +P
Sbjct: 299 GWDVGDIIA--GNAMVDMYAKMSKIDAAQKVFDNLP 332


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 196/628 (31%), Positives = 330/628 (52%), Gaps = 16/628 (2%)

Query: 112 ESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E LL D   V+ +L  C+ E  +++G   H L  K  +  +  V  ++V MY+KCG +  
Sbjct: 242 EGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNE 301

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAIC 228
                 +    ++ S N +++ ++     ++AF+    +++ G +++ N  T   +L  C
Sbjct: 302 AQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
                +   K+LH  + +        +SNA +  Y KCG +  AE VF G+  + V SW 
Sbjct: 362 LDKLQLRSLKELHGYSFR-HCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWN 420

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           A+I G  Q+GD  K L L+  M   G  P+ +T +  L +CA L++   G   H  V++ 
Sbjct: 421 ALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRN 480

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G+    FVGT+++  Y   G+   A+     M K  + VSWNA I+G+ +N    E++  
Sbjct: 481 GLETDFFVGTSLLSHYIHCGKASSARVLFDRM-KDKNLVSWNAMISGYSQNGLPYESLAL 539

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F + +       E    S+  ACS L +L   ++ H  ++K+    +  VG S+I+ Y K
Sbjct: 540 FRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAK 599

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G  +++ +VF  L   +V SWN++I A+  +G  ++AI L+E+M   G  P   T++ +
Sbjct: 600 SGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGI 659

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L AC H+GLV++G K F+ M     I P+  HY+C++D+L RAG+L+ AL  ++ +P + 
Sbjct: 660 LMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEA 719

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L  +CR    L++ E ++K++LEL+PD A  YV LSN+YA  G        R+
Sbjct: 720 DNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQ 779

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--- 705
           +MK   + K+ GCSWIEV  ++Y F   +    +  ++    ++L ++I +IG+  N   
Sbjct: 780 MMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSS 839

Query: 706 --------EKEDRVLYHSERLAVGFGLI 725
                   EK D +  HSE+LA+ FGL+
Sbjct: 840 VLHEVGEEEKIDILRGHSEKLAISFGLL 867



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/623 (25%), Positives = 288/623 (46%), Gaps = 52/623 (8%)

Query: 113 SLLDKQFVIEVLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSM 171
           SL  K+ +  +L  C  ++ +E GRR H  ++  T    D  +   L+ MYA CG     
Sbjct: 39  SLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDS 98

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGS 230
             V   M   ++   N L++GY +N L+      F+ L    D QP+++T+ +++  CG 
Sbjct: 99  RLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGG 158

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           +  +  G+ +H   +K+  +    V NAL+ MY KCG +++A  VF+ + + N++SW ++
Sbjct: 159 ILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSM 218

Query: 291 INGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I  F ++G       L+  ++ E+G+ P+  T    L  CA      +G   H   +K G
Sbjct: 219 ICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLG 278

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           ++    V  A+V MYS  G + EA+    +   + + VSWN  I+ F       EA    
Sbjct: 279 LSEEVMVNNAMVYMYSKCGYLNEAQMSFVK-NNNKNVVSWNTMISAFSLEGDVNEAFNLL 337

Query: 410 SQM--VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            +M     +   +E T  ++L AC     L + +++H    +  F+ +V + ++ I AY 
Sbjct: 338 QEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYA 396

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG+   AE+VF  +    V SWN++I  ++QNG  RKA+ L  +M   G +P   T  +
Sbjct: 397 KCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISS 456

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI------ 581
           +L AC+H   +Q G+++   +++  G+  +    + ++      GK   A +        
Sbjct: 457 LLLACAHLKSLQYGKEIHGYVLRN-GLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK 515

Query: 582 --------------SNLPIKPTAPIWRPL--------------FAACRCHSDLKMAEFIS 613
                         + LP +  A   + L              F AC   S L++ +   
Sbjct: 516 NLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAH 575

Query: 614 KQILE-LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
             +L+ L  +DA V  ++ +MYA++G   ++ +    +K K ++     SW    N I  
Sbjct: 576 GYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVA-----SW----NAIIV 626

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQ 695
               +    E  ++YE++K++ Q
Sbjct: 627 AHGIHGHGKEAIELYERMKKVGQ 649


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 202/634 (31%), Positives = 332/634 (52%), Gaps = 45/634 (7%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAK--CGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           ++ H+    T +  +  V A ++    K   GD++    V   MP  +    N ++ GY+
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYS 95

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +    + A S + ++    V P+ YTY  +L      +A+  G++LH   +KL + S   
Sbjct: 96  RVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVF 155

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V NAL+ +Y   G +  A  VF+   + +V++W  +I+G+ +   +++ ++L   M    
Sbjct: 156 VQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMR 215

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFH----------AQVIKRGM------------AL 352
           + P+  T    L++C+ L++ ++G   H           +V++  +            AL
Sbjct: 216 VLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTAL 275

Query: 353 GDFVG---------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           G F           TAIV  ++ LG++  A+    +M +    VSW A I G+ +  + +
Sbjct: 276 GIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPER-DFVSWTAMIDGYLQVNRFK 334

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           E +  F +M   +   DEFT  SIL AC+ L +L   E I + I K++ + +  VG++LI
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y  CG+ E A R+F+ +   D +SW ++I   + NG   +A+ +F +M+   I P   
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           T + VL AC+HSG+V  G+K F  M  ++GI P  AHY CMVDLLGRAG L+ A   I N
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P+KP + +W  L  ACR H D +MAE  ++QILEL+P++ AVYV L N+YA        
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            E RKLM  + I K PGCS IE+   ++ F + ++ H +  ++Y KL ++   ++  G++
Sbjct: 575 HEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYS 634

Query: 704 -----------DNEKEDRVLYHSERLAVGFGLIS 726
                      + EKE  V  HSE+LA+ FGLIS
Sbjct: 635 PDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLIS 668



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 202/439 (46%), Gaps = 37/439 (8%)

Query: 94  GFIDDGCSNT-VPVTCYSLES--LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           G+   GC N+ V + C  LE   + D+     +L   +R+  ++ GR  H  I K     
Sbjct: 93  GYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSS 152

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + FV  +L+++Y+  G++     V  +    D+ + N +++GY ++  FD++   F +++
Sbjct: 153 NVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEME 212

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            + V P+  T  ++L+ C  L  ++ GK++H     L+      + NAL+ MY  CG M+
Sbjct: 213 RMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMD 272

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGD------------------------------- 299
            A  +F+ +  R+VISWTAI+ GF   G                                
Sbjct: 273 TALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNR 332

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +++ L L   M+   I P+E+T    L +CA L    +G    A + K  + +  FVG A
Sbjct: 333 FKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNA 392

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY   G + +A +    M      +SW A I G   N   EEA++ FSQM++     
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAM-PHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITP 451

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRI-VKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           DE T   +L AC+    +   ++  +R+  +   E NV     +++   + G  ++A  V
Sbjct: 452 DEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEV 511

Query: 479 FSQL-TAADVVSWNSMIKA 496
              +    + + W S++ A
Sbjct: 512 IKNMPVKPNSIVWGSLLGA 530



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 147/326 (45%), Gaps = 33/326 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK--- 176
           ++ VLS CS+ + L +G+R H  +    +   + +  +L++MYA CGD+ + + +     
Sbjct: 223 LVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK 282

Query: 177 ----------------------------QMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
                                       +MP  D  S   ++ GY +   F +  S F +
Sbjct: 283 SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFRE 342

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +   +++P+ +T  ++L  C  L A++ G+ + A   K +    + V NAL+ MY  CG 
Sbjct: 343 MQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGN 402

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E A  +F  +  R+ ISWTA+I G   +G  E+ L +   M +  I P+E T    L +
Sbjct: 403 VEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCA 462

Query: 329 CASLRNSHMGYMFHAQV-IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           C        G  F A++  + G+         +VD+    G + EA + +K M    +S+
Sbjct: 463 CTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSI 522

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMV 413
            W + + G  R  + EE  E  +Q +
Sbjct: 523 VWGS-LLGACRVHRDEEMAEMAAQQI 547



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 127/268 (47%), Gaps = 15/268 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRND-------SFPDGFIDDG 99
           +A  +F+    R  +S + ++  G+ N+ + G++RN +    +       +  DG++   
Sbjct: 273 TALGIFDNMKSRDVISWTAIV-TGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVN 331

Query: 100 CSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA 156
               V      +++     D+  ++ +L+ C+    LELG    A I K  +  D FV  
Sbjct: 332 RFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGN 391

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +L++MY  CG+++  + +   MP+ D  S   ++ G A N   ++A   F ++    + P
Sbjct: 392 ALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITP 451

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAES 274
           +  T   +L  C     +D+GK+  A+ M  Q+  +  V++   ++ +  + G +++A  
Sbjct: 452 DEVTCIGVLCACTHSGMVDKGKKFFAR-MTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHE 510

Query: 275 VFEGL-VQRNVISWTAIINGFKQHGDYE 301
           V + + V+ N I W +++   + H D E
Sbjct: 511 VIKNMPVKPNSIVWGSLLGACRVHRDEE 538


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 190/615 (30%), Positives = 328/615 (53%), Gaps = 15/615 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    +  G+  HA + +     D  V  +L+ MY KCGDI +   +  +MP  D
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N    +    F  +  + V P+  T +T+ + C  L     G+ +H 
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K ++    +++N+L+ MY   G +E+AE+VF  +  ++V+SWTA+I     H    K
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M  +GI P+E T    L++CA + +  +G   H   IK G+     V  +++D
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 363 MYSGLGEIWEAKKQLKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           MYS    +  A +  + + GK+   VSW + I G   N ++ EA+  F QM +     + 
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNV--VSWTSLILGLRINNRSFEALLFFRQM-KESMKPNS 500

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T  S+L AC+ + +L   ++IH+  +++    +  + +++++ Y +CG    A   F+ 
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
               DV +WN ++  Y+Q G+A+ A+ LF+KM+   I P   TF+++L ACS SG+V +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F  M  +Y + P   HY+C+VD+LGRAG+L+ A  FI ++PI+P A IW  L  ACR
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++ E  +K++ E D      Y+ L N+YA  G      + R LM+ + +S +PGC
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKEDRV 711
           SW+E+  K++ F S + SHS+  ++   L     ++++ G            ++ + D  
Sbjct: 740 SWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIF 799

Query: 712 LYHSERLAVGFGLIS 726
             HSER A+ FGLI+
Sbjct: 800 CGHSERQAIAFGLIN 814



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 289/555 (52%), Gaps = 22/555 (3%)

Query: 111 LESLLDKQFVIE------VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
           LES+L+ +  +E      +L  C      + G R + L++ +  C    +  +L++M+ +
Sbjct: 85  LESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVR 144

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G++     V  +M   D+ S N L+ GYAK   FD+A + + ++   +++PN YT+ ++
Sbjct: 145 FGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSV 204

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L  C  +S I  GK++HA  ++  + S   V NAL+TMY+KCG + +A  +F+ + +R+ 
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR 264

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ISW A+I+G+ ++G   + L L  +MRE  +DP+  T T   ++C  L N  +G   H  
Sbjct: 265 ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGY 324

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V+K        +  +++ MYS LG + EA+     M +S   VSW A IA    ++   +
Sbjct: 325 VVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKDVVSWTAMIASLVSHKLPFK 383

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+E +  M       DE T  S+L AC+ +  L    ++H   +K+   S+V V +SLI+
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KC   ++A  VF  ++  +VVSW S+I     N R+ +A++ F +M  E ++P + T
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVT 502

Query: 525 FLAVLSACSHSGLVQDGQKV----FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            ++VLSAC+  G +  G+++      + V   G LP     + ++D+  R G+   AL  
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP-----NAILDMYVRCGRKVPALNQ 557

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQI-LELDPDDAAVYVTLSNMYAEAG 638
            ++     TA  W  L          K+A E   K + LE+ PD+   +++L    +++G
Sbjct: 558 FNSQKKDVTA--WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT-FISLLCACSKSG 614

Query: 639 LQADAEEQRKLMKMK 653
           +  +  E   +MK K
Sbjct: 615 MVTEGLEYFNIMKNK 629



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 215/434 (49%), Gaps = 4/434 (0%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            +QA      +  + ++     Y  +L +C    A DEG +++      +      + NA
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           LL+M+++ G + DA  VF  + +R+V SW  ++ G+ + G +++ L L   M    I PN
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            YTF   L +CA + +   G   HA VI+ G      VG A++ MY   G+I  A+    
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M K    +SWNA I+G+F N    E +E FS M       D  T +++  AC LL +  
Sbjct: 258 KMPKR-DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +H  +VKS+F  ++ + +SLI+ Y+  G  E+AE VFS++ + DVVSW +MI +  
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +    KA+  ++ M +EGI P   T ++VLSAC+  G +  G ++ E  +K  G++   
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSHV 435

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
              + ++D+  +   ++ AL    N+  K     W  L    R ++    A    +Q+ E
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNRSFEALLFFRQMKE 494

Query: 619 -LDPDDAAVYVTLS 631
            + P+   +   LS
Sbjct: 495 SMKPNSVTLISVLS 508


>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
          Length = 628

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 278/483 (57%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L   YIK G +  A  +F+ + +RNV +W A++ G    G  E+ L L   MR +G+ 
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMH 170

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+        CA LR+   G   HA V++ G+     VG+++  MY   G + E +  
Sbjct: 171 PDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 230

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ M  S S VS N  IAG  +N  +E A+E F  M     A D  T+ S + +CS L +
Sbjct: 231 LR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAA 289

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH +++K+  +  V V + L+  Y++CG   D+ERVF     +D    ++MI A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KAI LF++M+  G  P++ TFLA+L ACSHSGL ++G   FE M K YGI P
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQP 409

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P+ P   IW+ L +AC+   +  MAE I+K++
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 469

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  E RK M+   + KEPG SW+E+   I++F + 
Sbjct: 470 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 529

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SH    ++ E L+++M +I   G++           D EKE  + +HSE+LA+ F  +
Sbjct: 530 DESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFL 589

Query: 726 SLP 728
           SLP
Sbjct: 590 SLP 592



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 40/396 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA    +    D+F    L+  YA  GD+ +   + +++P  ++ S N L  GY KN
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 197 A-------LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTML 225
                   LFD                        ++   FL +    + P+ +   ++ 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVS 180

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  +  G+Q+HA  ++        V ++L  MY++CG +++ E+V   L   +++
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           S   II G  Q+GD E  L   C+MR  G+  +  TF  A++SC+ L     G   H QV
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEE 404
           +K G+     V T +V MYS  G + ++++     G   S +   +A I+ +  +   ++
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF--FGYCGSDTFLLSAMISAYGFHGHGQK 358

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           AIE F QM+   A   + T+ ++L ACS   L      C ++ ++      + +V   + 
Sbjct: 359 AIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTY--GIQPSVKHYTC 416

Query: 462 LIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           +++   + G  ++AE  + S     D V W +++ A
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 179/387 (46%), Gaps = 31/387 (8%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +LF + P+R  +S  +++F GY+   + G +R  +    D  P+  +    +    +
Sbjct: 94  AARELFERIPRRNVMSW-NILFGGYIKNGDLGGARKLF----DEMPERNVATWNAMVAGL 148

Query: 107 TCY-----SLESLLD--------KQFVIEVLSYCSREECLEL-----GRRYHALITKTAV 148
           T       SL   LD         +F +  +S C    C  L     GR+ HA + ++ +
Sbjct: 149 TNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRC----CAGLRDVVTGRQVHAYVVRSGL 204

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
             D  V +SL +MY +CG ++   AV++ +P L I SCN ++AG  +N   + A  +F  
Sbjct: 205 DRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCM 264

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +  + V  +  T+ + ++ C  L+A+ +G+Q+H Q MK        V   L+ MY +CG 
Sbjct: 265 MRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGC 324

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + D+E VF G    +    +A+I+ +  HG  +K + L   M   G +P++ TF   L +
Sbjct: 325 LGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYA 384

Query: 329 C--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           C  + L+   M   F       G+       T +VD+    G + EA+  +  M  +   
Sbjct: 385 CSHSGLKEEGMD-CFELMTKTYGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDG 443

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           V W   ++   + QK  +  E  ++ V
Sbjct: 444 VIWKTLLSA-CKTQKNFDMAERIAKRV 469



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 5/169 (2%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           AA D FT + ++ A + L  L    ++  RI +     NV   + L   Y K G    A 
Sbjct: 72  AATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGAR 127

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F ++   +V +WN+M+   +  G   +++ LF  M  EG+ P      +V   C+   
Sbjct: 128 KLFDEMPERNVATWNAMVAGLTNLGFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLR 187

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V  G++V   +V+  G+  +    S +  +  R G L+     +  LP
Sbjct: 188 DVVTGRQVHAYVVRS-GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++ +DAA     +S + +AC  L  L    Q+H+    S   ++    + L+ AY  
Sbjct: 35  FRGVLWSDAA---RLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYAD 88

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G    A  +F ++   +V+SWN +   Y +NG    A  LF++M    +    +T+ A+
Sbjct: 89  LGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----ATWNAM 144

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++  ++ G  ++   +F  M +E G+ P+E
Sbjct: 145 VAGLTNLGFDEESLGLFLDMRRE-GMHPDE 173



 Score = 39.3 bits (90), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  +S CS    L  G++ H  + K  V     V   LV+MY++CG +     V      
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 337

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D    + +++ Y  +    +A   F ++     +P+  T+  +L  C      +EG   
Sbjct: 338 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 397

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  +Q   K      ++ +  + G +++AE++   + +  + + W  +++  K 
Sbjct: 398 FELMTKTYGIQPSVKH--YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +++   R+   + E  +DP++    V L++
Sbjct: 456 QKNFDMAERIAKRVIE--LDPHDSASYVLLSN 485


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 176/538 (32%), Positives = 295/538 (54%), Gaps = 5/538 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           + LG   H  I ++    D++V  +L+ MY   G ++    V   M   D+ S N +++G
Sbjct: 133 ISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISG 192

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y +N   + A   F  +    V P+H T  +ML +CG L  ++ G+ +H    + +   K
Sbjct: 193 YYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDK 252

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY+KCG M++A  VF  + +R+VI+WT +ING+ + GD E  L L  LM+ 
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQF 312

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+ PN  T    +++C      + G   H   I++ +     + T+++ MY+    I  
Sbjct: 313 EGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDL 372

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             +      ++ +   W+A IAG  +N+   +A++ F +M R D   +  T +S+L A +
Sbjct: 373 CFRVFSGASRNHTG-PWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYA 431

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL----TAADVV 488
            L  L     IH  + K+ F S++   + L+  Y+KCG+ E A ++F+ +     + DVV
Sbjct: 432 TLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            W ++I  Y  +G    A+ +F +MV  G+ P   TF + L+ACSHSGLV++G  +F  M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFM 551

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           ++ Y  L    HY+C+VDLLGRAG+L+ A   I+ +P +PT+ IW  L AAC  H ++++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQL 611

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            E  + ++ EL+P++   YV L+N+YA  G   D E+ R +M+   + K+PG S IE+
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 9/469 (1%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
           +IT   V G    T S+   YA CG I     +  +MP   + S N ++  Y ++ L+  
Sbjct: 41  VITGGRVSGHILSTLSVT--YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHD 98

Query: 202 AFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           A + F+++  +GI   P+ YTY  +    G L +I  G  +H + ++  +     V NAL
Sbjct: 99  AINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNAL 158

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY+  G +E A +VF+ +  R+VISW  +I+G+ ++G     L +   M  +G+DP+ 
Sbjct: 159 LAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDH 218

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T    L  C  L+   MG   H  V ++ +     V  A+V+MY   G + EA+     
Sbjct: 219 ATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGR 278

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M +    ++W   I G+  +   E A+E    M       +  T +S++ AC     L  
Sbjct: 279 MERR-DVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLND 337

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            + +H   ++ K  S++ + +SLI  Y KC   +   RVFS  +      W+++I    Q
Sbjct: 338 GKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQ 397

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           N   R A+ LF++M  E + P  +T  ++L A +    ++    +   + K  G +    
Sbjct: 398 NELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKT-GFMSSLD 456

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRCHSD 605
             + +V +  + G LE A    + +  K  +    +W  L +    H D
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           E F +  +N  +  +  Y S+L   +   S++  + +H  ++     S  H+ S+L   Y
Sbjct: 3   EVFLRRAKNALSVKQ--YQSLLNHYAATQSISKTKALHCHVITGGRVSG-HILSTLSVTY 59

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR--PTNST 524
             CG    A ++F ++  + ++S+N +I+ Y ++G    AI +F +MV EGI+  P   T
Sbjct: 60  ALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYT 119

Query: 525 FLAVLSA 531
           +  V  A
Sbjct: 120 YPFVAKA 126


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 208/629 (33%), Positives = 342/629 (54%), Gaps = 33/629 (5%)

Query: 121 IEVLSYCSREECLELGR--------RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           I VL  CS+ + LE+ +        R H  +  ++     F TA LVN Y  CGD++   
Sbjct: 205 IGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS-----FATA-LVNFYGSCGDLEQAF 258

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGS 230
               +   L++     ++  Y +   +D+A   F  + L+G  V+ +      +L  C  
Sbjct: 259 RAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEG--VKLDRIACMAVLNACSG 315

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              ++EG+ +H    ++++       NAL+ MY KCG +E+A  VF  +  R+VISW  I
Sbjct: 316 PRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTI 375

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I    QH  + + L L+ LM+ DG+  ++ +F  AL  CA+      G M H+ +++ G+
Sbjct: 376 IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGI 435

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK-TEEAIEAF 409
                +  AI+DMY       +A +  + M K+   VSWNA I  +    + + EA+  F
Sbjct: 436 KADVMLDNAILDMYGSCKSTDDASRVFRAM-KARDQVSWNAMITAYAAQPRLSSEALLLF 494

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM  +    D  ++ + L AC+   SLA  + +H RI ++  ESN+ V ++++  Y K 
Sbjct: 495 QQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKS 554

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           GS   A ++F ++   DV+SWN MI A++Q+G A + +  F +M  EG  P + TF++V+
Sbjct: 555 GSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614

Query: 530 SACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           SACSH GLV+DG ++F S++ ++  I P   HY CMVDL+ RAGKL+ A  FI+  P+KP
Sbjct: 615 SACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKP 674

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              I   +  A + H D++ A   ++ ++EL PD +A YV LSN+Y E G + +  + R+
Sbjct: 675 DRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRR 734

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
           LM  K I KEP  S I V  +++ FF+ + +++  P++ E+L++L  ++   G+T     
Sbjct: 735 LMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTL 794

Query: 704 ------DNEKEDRVLYHSERLAVGFGLIS 726
                 D +K+  + YHSE+LA+ FGLIS
Sbjct: 795 MLHDVGDEQKKRLLSYHSEKLAIAFGLIS 823



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 217/451 (48%), Gaps = 6/451 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++L   +    L+LG+  HA I K+A+    F+   LV MY  CG +    A   +MP  
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS-LSAIDEGKQL 240
           D  +   L+  + +    +QA   F  +    V P +  +  +L  C +    ++EG+++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRI 122

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H         S   VS  LL MY KC  +EDA  VF+G+  + V+ W A+I  + Q   +
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-ALGD-FVGT 358
           E+ +++   M  +G+     TF   L +C+ L++  +  +    V +R    L D    T
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V+ Y   G++ +A +           +   A I  + + ++ +EA+E F  M+     
Sbjct: 243 ALVNFYGSCGDLEQAFRAFSR--HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D     ++L ACS    L     IH  + + +F+ +V+ G++LI  Y KCGS E+A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  +   DV+SWN++I A+ Q+ +  +A+ L   M ++G++    +F+  L  C+ S  +
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEAL 420

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
             G ++  S + E GI  +    + ++D+ G
Sbjct: 421 AKG-RMIHSWIVESGIKADVMLDNAILDMYG 450



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 259/536 (48%), Gaps = 14/536 (2%)

Query: 115 LDKQFVIEVLSYCSRE-ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +++ FV  VL  CS + E LE GRR H ++  TA+  D +V+ +L++MY KC  ++    
Sbjct: 98  VNRNFV-AVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARK 156

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   + +  +   N ++  YA+    +QA   F  +    V+    T+  +L  C  L  
Sbjct: 157 VFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKD 216

Query: 234 IDEGK--QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           ++  K  +L  +  +  +L  ++ + AL+  Y  CG +E A   F    +  +I  TA+I
Sbjct: 217 LEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMI 275

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             + Q   +++ L L  +M  +G+  +       L +C+  R    G M H     R + 
Sbjct: 276 TQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHG--FMREIR 333

Query: 352 LGDFV--GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
               V  G A+++MY   G + EA +  + M +    +SWN  IA   ++ +  EA+   
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLL 392

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M  +    D+ ++ + L  C+   +LA    IHS IV+S  +++V + +++++ Y  C
Sbjct: 393 HLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSC 452

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR-ARKAIILFEKMVVEGIRPTNSTFLAV 528
            S +DA RVF  + A D VSWN+MI AY+   R + +A++LF++M + G  P   +F+A 
Sbjct: 453 KSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAA 512

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSAC+    + +G K+    ++E G+       + ++++  ++G L +A      +P+ P
Sbjct: 513 LSACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPL-P 570

Query: 589 TAPIWRPLFAACRCHSDL-KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
               W  + +A   H    ++  F  +   E    +   +V++ +  +  GL  D 
Sbjct: 571 DVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDG 626



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 183/388 (47%), Gaps = 9/388 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+ +L +     ++D GK++HA+  K        + + L+ MY+ CG + DA++ F+ + 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC-ASLRNSHMGY 339
            ++ ++W  +I    Q GD E+ L L   M+ +G+ P    F   L +C A       G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +    M    +V T ++ MY     + +A+K    + +    V WNA I  + + 
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI-RHKRVVEWNAMITAYAQQ 179

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH-- 457
              E+AI+ F  M+      +  T+  +L ACS L  L   + +    V+ +   ++H  
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDS 238

Query: 458 -VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
              ++L+  Y  CG  E A R FS+    +++   +MI  Y+Q  R  +A+ LF+ M++E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G++      +AVL+ACS    +++G ++    ++E          + ++++ G+ G LE 
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEG-RMIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHS 604
           A+    ++  +     W  + AA   HS
Sbjct: 357 AVEVFRSMQHRDVIS-WNTIIAAHGQHS 383



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 12/238 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   +  L  C+  E L  GR  H+ I ++ +  D  +  ++++MY  C        V 
Sbjct: 403 DKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVF 462

Query: 176 KQMPYLDIASCNCLLAGYAKNA-LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           + M   D  S N ++  YA    L  +A   F ++      P+  ++   L+ C + +++
Sbjct: 463 RAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASL 522

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EGK LH +  +    S   V+NA+L MY K G +  A  +F  +   +VISW  +I+ F
Sbjct: 523 AEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAF 582

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            QHG  ++ LR    M  +G  PN+ TF   +++C+           H  ++K G+ L
Sbjct: 583 AQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQL 629


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 174/479 (36%), Positives = 276/479 (57%), Gaps = 13/479 (2%)

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KCG + DA  VF+ +  R+V+SWT +I G+ Q+    + + L+  M      PN +T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           FT  L +  +     +G   HA  +K       +VG+A++DMY+   ++  A      + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL- 119

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
            S + VSWNA IAGF R    E  +  F++M RN      FTYSS+  A + + +L    
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            +H+ ++KS  +    VG++++  Y K GS  DA +VF ++   D+V+WN+M+ A +Q G
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
             ++A+  FE++   GI+    TFL+VL+ACSH GLV++G+  F+ M+K+Y + PE  HY
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHY 298

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
              VDLLGRAG L+ ALIF+  +P++PTA +W  L  ACR H + KM ++ +  + ELDP
Sbjct: 299 VSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDP 358

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
           DD    V L N+YA  G   DA   RK+MK   + KEP CSW+++ N ++ F + + +H 
Sbjct: 359 DDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHP 418

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPA 729
           +   +Y   +++  +I+  G+  N           E+E ++ YHSE++A+ F LI++PA
Sbjct: 419 KSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPA 477



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 179/390 (45%), Gaps = 39/390 (10%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCG +     V  +MP  D+ S   L+AGYA+N +  +A      +     +PN +T
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           ++++L   G+      G+Q+HA  +K  +     V +ALL MY +C  M+ A  VF+ LV
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            +N +SW A+I GF +  D E  L     M+ +G     +T++   ++ A +     G  
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA +IK G  L  FVG  ++ MY+  G + +A+K    M K    V+WN  +    +  
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKR-DLVTWNTMLTALAQYG 239

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +EA+  F ++ +     ++ T+ S+L ACS           H  +VK   E   +   
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACS-----------HGGLVK---EGKHYF-- 283

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            +++ YN                  ++  + S +    + G  ++A+I   KM +E   P
Sbjct: 284 DMMKDYN---------------VQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPME---P 325

Query: 521 TNSTFLAVLSACSHSGLVQDGQ----KVFE 546
           T + + A+L AC      + GQ     VFE
Sbjct: 326 TAAVWGALLGACRMHKNAKMGQYAADHVFE 355



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/502 (22%), Positives = 205/502 (40%), Gaps = 77/502 (15%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G + HAL  K     D +V ++L++MYA+C  +   + V  ++   +  S N L+AG+A
Sbjct: 76  IGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFA 135

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           + A  +     F ++        H+TYS+M +    + A+++G+ +HA  +K        
Sbjct: 136 RKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAF 195

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N +L MY K G M DA  VF+ + +R++++W  ++    Q+G  ++ +     +R+ G
Sbjct: 196 VGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCG 255

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I  N+ TF   L +C+           H  ++K G    D     ++  Y+   EI    
Sbjct: 256 IQLNQITFLSVLTACS-----------HGGLVKEGKHYFD-----MMKDYNVQPEIDHYV 299

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
             +  +G+           AG  +    E  I  F   +   AA     + ++L AC + 
Sbjct: 300 SFVDLLGR-----------AGLLK----EALIFVFKMPMEPTAA----VWGALLGACRMH 340

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV-----VS 489
            + A   Q  +  V      +      L   Y   G W DA RV   + A  V      S
Sbjct: 341 KN-AKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACS 399

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH--SGLVQDGQKVFES 547
           W                           ++  NS  + V    +H  SG +    +    
Sbjct: 400 W---------------------------VQIENSVHMFVADDDTHPKSGDIYRMWEEINM 432

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKL-----EIALIF-ISNLPIKPTAPIWRPLFAACR 601
            +K+ G +P  AH    ++   R  KL     +IAL F + N+P   +  I + +     
Sbjct: 433 RIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGD 492

Query: 602 CHSDLK-MAEFISKQILELDPD 622
           CHS  K +++   ++I+  D +
Sbjct: 493 CHSAFKYVSKVFKREIVVRDTN 514



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 5/178 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           + S  +R   LE GR  HA + K+      FV  +++ MYAK G +     V  +M   D
Sbjct: 165 MFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRD 224

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N +L   A+  L  +A + F ++    +Q N  T+ ++L  C     + EGK  H 
Sbjct: 225 LVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK--HY 282

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAE-SVFEGLVQRNVISWTAIINGFKQH 297
             M   Y  +  + +  + + +  + G++++A   VF+  ++     W A++   + H
Sbjct: 283 FDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/632 (31%), Positives = 330/632 (52%), Gaps = 26/632 (4%)

Query: 132  CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
            C   G   H  I K        V  +L++ YAK   I   V V  +MP  D  S N +++
Sbjct: 432  CARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVIS 491

Query: 192  GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            G + N L  +A   F+++     + +  T  ++L  C        G+ +H  ++K   + 
Sbjct: 492  GCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIG 551

Query: 252  KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            +T+++NALL MY  C   +    +F  + Q+NV+SWTA+I  + + G ++K   L+  M 
Sbjct: 552  ETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMV 611

Query: 312  EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             DGI P+ +  T AL + A   +   G   H   I+ GM     V  A+++MY     + 
Sbjct: 612  LDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVE 671

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV---RNDAACDEFTYSSIL 428
            EA+     +  +   +SWN  I G+ RN    E+   FS M+   R +A     T + IL
Sbjct: 672  EARLIFDRV-TNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQFRPNAV----TMTCIL 726

Query: 429  KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             A + + SL    +IH+  ++  F  + +  ++L++ Y KCG+   A  +F +LT  +++
Sbjct: 727  PAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLI 786

Query: 489  SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            SW  MI  Y  +G  + AI LFE+M   GI P  ++F A+L AC HSGL  +G++ F++M
Sbjct: 787  SWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAM 846

Query: 549  VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             KEY I P+  HY+C+VDLL R G L+ AL FI ++PI+P + IW  L   CR H ++K+
Sbjct: 847  QKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKL 906

Query: 609  AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
            AE ++ ++ +L+P++   YV L+N+YAEA      ++ +  +  + + +  G SWIEV +
Sbjct: 907  AEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRS 966

Query: 669  KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLYHSER 717
            K++ F + N++H +  ++ E L  + +++   GH   +K           ++ +  HS +
Sbjct: 967  KVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSK 1026

Query: 718  LAVGFGLISLP-------AKNKFECSRTLEYA 742
            LAV FG+++LP        KN   CS   E A
Sbjct: 1027 LAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAA 1058



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/461 (30%), Positives = 216/461 (46%), Gaps = 17/461 (3%)

Query: 123 VLSYCSREECLELGRRYHALI--TKTAVCGDQ--FVTASLVNMYAKCGDIKSMVAVVKQM 178
           V+  C  E  LE  +R HALI  +  A  G +   +   LV  Y KCGD+     V   M
Sbjct: 103 VVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGM 162

Query: 179 P--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P    D+     L++ YAK   F +A S F ++    V P+ +  S +L    SL ++ E
Sbjct: 163 PPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTE 222

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+ +H    KL      AV+NAL+ +Y +CG MEDA  VF+ +  R+ ISW ++I G   
Sbjct: 223 GEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFS 282

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG--- 353
           +G +   + L   M   G + +  T    L +CA L    +G   H   +K G+  G   
Sbjct: 283 NGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDS 342

Query: 354 -------DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
                    +G+ +V MY   G++  A++    M    +   WN  + G+ +  + EE++
Sbjct: 343 VQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESL 402

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
             F QM     A DE   S +LK  + L         H  IVK  F +   V ++LI  Y
Sbjct: 403 SLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFY 462

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K     DA  VF+++   D +SWNS+I   S NG   +AI LF +M  +G    + T L
Sbjct: 463 AKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLL 522

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           +VL AC+ S     G+ V    VK  G++ E +  + ++D+
Sbjct: 523 SVLPACAQSRYWFAGRVVHGYSVKT-GLIGETSLANALLDM 562



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 264/556 (47%), Gaps = 25/556 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAV----------CGDQFVTASLVNMYAKCGDIK 169
           V+ VL  C+      +G+  H    K+ +            D  + + LV MY KCGD+ 
Sbjct: 308 VLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMA 367

Query: 170 SMVAVVKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
           S   V   M    ++   N ++ GYAK   F+++ S F+++  + + P+ +  S +L   
Sbjct: 368 SARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCI 427

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             LS   +G   H   +KL + ++ AV NAL++ Y K  M+ DA  VF  + +++ ISW 
Sbjct: 428 TCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWN 487

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           ++I+G   +G   + + L   M   G + +  T    L +CA  R    G + H   +K 
Sbjct: 488 SVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKT 547

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
           G+     +  A++DMYS   + W++  Q+ + MG+  + VSW A I  + R    ++   
Sbjct: 548 GLIGETSLANALLDMYSNCSD-WQSTNQIFRSMGQK-NVVSWTAMITSYMRAGLFDKVAG 605

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
              +MV +    D F  +S L A +   SL   + +H   +++  E  + V ++L+E Y 
Sbjct: 606 LLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYV 665

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC + E+A  +F ++T  DV+SWN++I  YS+N    ++  LF  M+++  RP   T   
Sbjct: 666 KCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTC 724

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L A +    ++ G+++    ++  G L +    + +VD+  + G L +A +    L  K
Sbjct: 725 ILPAAASISSLERGREIHAYALRR-GFLEDSYASNALVDMYVKCGALLVARVLFDRL-TK 782

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYA--EAGLQADA 643
                W  + A    H   K A  + +Q+    ++PD A+    L   YA   +GL A+ 
Sbjct: 783 KNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAIL---YACCHSGLAAEG 839

Query: 644 EEQRKLMKMKEISKEP 659
               K M+ KE   EP
Sbjct: 840 RRFFKAMQ-KEYKIEP 854



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 194/440 (44%), Gaps = 12/440 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V  VL   S    L  G   H L+ K  +     V  +L+ +Y++CG ++    V 
Sbjct: 203 DAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVF 262

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D  S N ++ G   N     A   F K+     + +  T  ++L  C  L    
Sbjct: 263 DSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGL 322

Query: 236 EGKQLHAQTMKLQYL----------SKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NV 284
            GK +H  ++K   L             A+ + L+ MY+KCG M  A  VF+ +  + NV
Sbjct: 323 IGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNV 382

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
             W  I+ G+ + G++E+ L L   M E GI P+E+  +  L     L  +  G + H  
Sbjct: 383 HVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGY 442

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           ++K G      V  A++  Y+    I +A      M +   ++SWN+ I+G   N    E
Sbjct: 443 IVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQ-DTISWNSVISGCSSNGLNSE 501

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           AIE F +M       D  T  S+L AC+          +H   VK+       + ++L++
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLD 561

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+ C  W+   ++F  +   +VVSW +MI +Y + G   K   L ++MV++GIRP    
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621

Query: 525 FLAVLSACSHSGLVQDGQKV 544
             + L A +    ++ G+ V
Sbjct: 622 VTSALHAFAGDESLKQGKSV 641



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 195/422 (46%), Gaps = 14/422 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ VL  C++      GR  H    KT + G+  +  +L++MY+ C D +S   +
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            + M   ++ S   ++  Y +  LFD+       + LDGI  +P+ +  ++ L       
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGI--RPDVFAVTSALHAFAGDE 633

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           ++ +GK +H  T++        V+NAL+ MY+KC  +E+A  +F+ +  ++VISW  +I 
Sbjct: 634 SLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIG 693

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ ++    +   L   M      PN  T T  L + AS+ +   G   HA  ++RG   
Sbjct: 694 GYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLE 752

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +   A+VDMY   G +  A+     + K  + +SW   IAG+  +   + AI  F QM
Sbjct: 753 DSYASNALVDMYVKCGALLVARVLFDRLTKK-NLISWTIMIAGYGMHGFGKHAIALFEQM 811

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGS 471
             +    D  ++S+IL AC      A   +    + K  K E  +   + +++  ++ G 
Sbjct: 812 RGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGD 871

Query: 472 WEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV--VEGIRPTNSTFLAV 528
            ++A E + S     D   W S++       R  K + L EK+   V  + P N+ +  +
Sbjct: 872 LKEALEFIESMPIEPDSSIWVSLL----HGCRIHKNVKLAEKVADKVFKLEPENTGYYVL 927

Query: 529 LS 530
           L+
Sbjct: 928 LA 929



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 192/416 (46%), Gaps = 30/416 (7%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH----AQTMKLQYLSKTAVSNALLTM 262
           L+L G D   +  +Y  ++ +CG   +++  K+ H    A +        + +   L+  
Sbjct: 86  LRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLA 145

Query: 263 YIKCGMMEDAESVFEGLVQR--NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
           Y+KCG + +A +VF+G+  +  +V  WT++++ + + GD+++ + L   M+  G+ P+ +
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
             +  L   +SL +   G + H  + K G+     V  A++ +YS  G + +A +    M
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
                ++SWN+ I G F N     A++ FS+M          T  S+L AC+ L      
Sbjct: 266 -HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG 324

Query: 441 EQIHSRIVKSKF-------ESNVH---VGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVS 489
           + +H   VKS         +S +    +GS L+  Y KCG    A RVF  +++  +V  
Sbjct: 325 KAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHV 384

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS-----ACSHSGLVQDGQKV 544
           WN ++  Y++ G   +++ LF +M   GI P       +L      +C+  GLV  G  V
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV 444

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
                 + G   + A  + ++    ++  +  A++  + +P + T   W  + + C
Sbjct: 445 ------KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTIS-WNSVISGC 493


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 190/615 (30%), Positives = 328/615 (53%), Gaps = 15/615 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    +  G+  HA + +     D  V  +L+ MY KCGDI +   +  +MP  D
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N    +    F  +  + V P+  T +T+ + C  L     G+ +H 
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K ++    +++N+L+ MY   G +E+AE+VF  +  ++V+SWTA+I     H    K
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M  +GI P+E T    L++CA + +  +G   H   IK G+     V  +++D
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 363 MYSGLGEIWEAKKQLKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           MYS    +  A +  + + GK+   VSW + I G   N ++ EA+  F QM +     + 
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNV--VSWTSLILGLRINNRSFEALLFFRQM-KESMKPNS 500

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T  S+L AC+ + +L   ++IH+  +++    +  + +++++ Y +CG    A   F+ 
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
               DV +WN ++  Y+Q G+A+ A+ LF+KM+   I P   TF+++L ACS SG+V +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F  M  +Y + P   HY+C+VD+LGRAG+L+ A  FI ++PI+P A IW  L  ACR
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H ++++ E  +K++ E D      Y+ L N+YA  G      + R LM+ + +S +PGC
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG----------HTDNEKEDRV 711
           SW+E+  K++ F S + SHS+  ++   L     ++++ G            ++ + D  
Sbjct: 740 SWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSSFTSEIESSRADIF 799

Query: 712 LYHSERLAVGFGLIS 726
             HSER A+ FGLI+
Sbjct: 800 CGHSERQAIAFGLIN 814



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 289/555 (52%), Gaps = 22/555 (3%)

Query: 111 LESLLDKQFVIE------VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
           LES+L+ +  +E      +L  C      + G R + L++ +  C    +  +L++M+ +
Sbjct: 85  LESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVR 144

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G++     V  +M   D+ S N L+ GYAK   FD+A + + ++   +++PN YT+ ++
Sbjct: 145 FGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSV 204

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L  C  +S I  GK++HA  ++  + S   V NAL+TMY+KCG + +A  +F+ + +R+ 
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDR 264

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ISW A+I+G+ ++G   + L L  +MRE  +DP+  T T   ++C  L N  +G   H  
Sbjct: 265 ISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGY 324

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V+K        +  +++ MYS LG + EA+     M +S   VSW A IA    ++   +
Sbjct: 325 VVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKDVVSWTAMIASLVSHKLPFK 383

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A+E +  M       DE T  S+L AC+ +  L    ++H   +K+   S+V V +SLI+
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KC   ++A  VF  ++  +VVSW S+I     N R+ +A++ F +M  E ++P + T
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSVT 502

Query: 525 FLAVLSACSHSGLVQDGQKV----FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            ++VLSAC+  G +  G+++      + V   G LP     + ++D+  R G+   AL  
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDGFLP-----NAILDMYVRCGRKVPALNQ 557

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQI-LELDPDDAAVYVTLSNMYAEAG 638
            ++     TA  W  L          K+A E   K + LE+ PD+   +++L    +++G
Sbjct: 558 FNSQKKDVTA--WNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT-FISLLCACSKSG 614

Query: 639 LQADAEEQRKLMKMK 653
           +  +  E   +MK K
Sbjct: 615 MVTEGLEYFNIMKNK 629



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 215/434 (49%), Gaps = 4/434 (0%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            +QA      +  + ++     Y  +L +C    A DEG +++      +      + NA
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           LL+M+++ G + DA  VF  + +R+V SW  ++ G+ + G +++ L L   M    I PN
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
            YTF   L +CA + +   G   HA VI+ G      VG A++ MY   G+I  A+    
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M K    +SWNA I+G+F N    E +E FS M       D  T +++  AC LL +  
Sbjct: 258 KMPKR-DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
               +H  +VKS+F  ++ + +SLI+ Y+  G  E+AE VFS++ + DVVSW +MI +  
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +    KA+  ++ M +EGI P   T ++VLSAC+  G +  G ++ E  +K  G++   
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSHV 435

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
              + ++D+  +   ++ AL    N+  K     W  L    R ++    A    +Q+ E
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS-WTSLILGLRINNRSFEALLFFRQMKE 494

Query: 619 -LDPDDAAVYVTLS 631
            + P+   +   LS
Sbjct: 495 SMKPNSVTLISVLS 508


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 307/550 (55%), Gaps = 7/550 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVAVVKQMPYL 181
           +L  C++      G + HA + K+ +  D+FV  SL+ +Y K G D      V   +   
Sbjct: 124 LLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVK 183

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S   +++GY +      +   F K+    V+PN +T S ++  C  L  +  G+  H
Sbjct: 184 DVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFH 243

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   + S   +++AL+ M+ +   ++DA  +F+ L++ + I WT+II+   ++  ++
Sbjct: 244 GVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFD 303

Query: 302 KPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + LR    M+ D G+ P+ +TF   L +C +L     G   HA+VI  G      V +++
Sbjct: 304 EALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSL 363

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY   G + E+++    M    +SVSW+A + G+ +N   +  I+ F +M + D  C 
Sbjct: 364 VDMYGKCGSVGESQRIFDRM-PIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLYC- 421

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              + +IL+ C+ L ++   +++H + ++     +V V S+L++ Y KCG  E A+ +F 
Sbjct: 422 ---FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFD 478

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q+   ++++WNSMI  ++QNGR  +A+ +F +MV EGI+P   +F+ +L ACSH GLV +
Sbjct: 479 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 538

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G++ F SM K+YGI     HYSCMVDLLGRAG LE A I I     +  + +W  L  AC
Sbjct: 539 GREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGAC 598

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
              ++ ++AE I+K+++EL+PD    YV L+N+Y   G   DA   R+LMK + ++K PG
Sbjct: 599 TTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPG 658

Query: 661 CSWIEVYNKI 670
            SWIE  N +
Sbjct: 659 KSWIETKNNL 668



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 205/398 (51%), Gaps = 14/398 (3%)

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           K+     A      +D  ++      Y+++L  C  + A + G Q+HA  +K        
Sbjct: 95  KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154

Query: 255 VSNALLTMYIKCGM-MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           V N+LLT+Y K G    +   VF+GL  ++VISWT++I+G+ + G     L L   M   
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 214

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G++PN +T +  + +C+ L +  +G +FH  V+ RG      + +A++DM+     + +A
Sbjct: 215 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 274

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSILKACS 432
           ++   E+     ++ W + I+   RN   +EA+  F  M R+   C D FT+ ++L AC 
Sbjct: 275 RQLFDEL-LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACG 333

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L  L   +++H++++ + F  NV V SSL++ Y KCGS  +++R+F ++   + VSW++
Sbjct: 334 NLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSA 393

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           ++  Y QNG  +  I +F KM     +     F  +L  C+    V+ G++V    +++ 
Sbjct: 394 LLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKG 449

Query: 553 G---ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           G   ++ E A    +VDL  + G +E A      +P++
Sbjct: 450 GWRDVIVESA----LVDLYAKCGCIEYAQTIFDQMPVR 483


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 178/566 (31%), Positives = 322/566 (56%), Gaps = 14/566 (2%)

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAF-SFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           +V      LD+ + N +L  +  + +  +A  S+   L+     P+ +T+ ++L  C  L
Sbjct: 33  SVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALL 92

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                GK LH Q +K    S   +   LL MY  CG ++ A  +FE +  RN + WT++I
Sbjct: 93  LEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMI 152

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+ ++    + L L   M EDG  P+E T    +++CA L++  +G   H+ + +  M 
Sbjct: 153 SGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMK 212

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           +   +G+A+V+MY+  G++  A++   ++       +W+A I G+ +N ++ EA++ F +
Sbjct: 213 ICAVLGSALVNMYAKCGDLKTARQVFDQL-SDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 412 MVR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +   ++   +E T  +++ AC+ L  L T   +H  I +++   +V + +SLI+ ++KCG
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             + A+R+F  ++  D++SWNSM+   + +G  R+A+  F  M    ++P   TF+ VL+
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLT 391

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSH+GLVQ+G+K+F  +   YG+  +  HY CMVDLL RAG L  A  FI  +P++P  
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            IW  +  ACR +++L++ E  ++ +LEL+P +  VY+ LSN+YA   +  + ++ R+LM
Sbjct: 452 AIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELM 511

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT------- 703
             K I K PGCS + + N  + F + + SH E+ ++   L+Q+ ++++ +G+        
Sbjct: 512 NEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVL 571

Query: 704 ----DNEKEDRVLYHSERLAVGFGLI 725
               DN+KE+ V  HSE+LA+ +GL+
Sbjct: 572 LNIDDNKKEESVSQHSEKLALCYGLL 597



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 152/304 (50%), Gaps = 8/304 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            ++G+  H  + K  +  D ++  +L+NMYA CGD+KS   + ++M + +      +++G
Sbjct: 95  FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISG 154

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y KN   ++A   + K++     P+  T +T+++ C  L  +  G +LH+   ++     
Sbjct: 155 YMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC 214

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             + +AL+ MY KCG ++ A  VF+ L  ++V +W+A+I G+ ++    + L+   L RE
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ---LFRE 271

Query: 313 ----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
                 + PNE T    +++CA L +   G   H  + +        +  +++DM+S  G
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           +I  AK+    M      +SWN+ + G   +    EA+  F  M   D   DE T+  +L
Sbjct: 332 DIDAAKRIFDSMSYK-DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390

Query: 429 KACS 432
            ACS
Sbjct: 391 TACS 394



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 179/397 (45%), Gaps = 33/397 (8%)

Query: 16  FTFPY-----PVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNG 70
           FTFP       ++ + K  K  H + V+       Y    L N       L ++  +F  
Sbjct: 80  FTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLF-- 137

Query: 71  YMNIEEKGISRNGYSTRN--DSFPDGFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLS 125
                     R G+  +    S   G++ + C N   +    +E      D+  +  ++S
Sbjct: 138 ---------ERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVS 188

Query: 126 YCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIAS 185
            C+  + L +G + H+ I +  +     + ++LVNMYAKCGD+K+   V  Q+   D+ +
Sbjct: 189 ACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYA 248

Query: 186 CNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
            + L+ GY KN    +A   F ++  G +++PN  T   +++ C  L  ++ G+ +H   
Sbjct: 249 WSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYI 308

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
            + Q     +++N+L+ M+ KCG ++ A+ +F+ +  +++ISW +++NG   HG   + L
Sbjct: 309 TRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREAL 368

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVGT 358
               LM+   + P+E TF   L +C     SH G       +F+      G+ L      
Sbjct: 369 AQFHLMQTTDLQPDEITFIGVLTAC-----SHAGLVQEGKKLFYEIEALYGVRLKSEHYG 423

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +VD+    G + EA++ ++ M        W + +  
Sbjct: 424 CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 2/184 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S C++   LE GR  H  IT+T       +  SL++M++KCGDI +   +   M 
Sbjct: 285 ILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS 344

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           Y D+ S N ++ G A + L  +A + F  +   D+QP+  T+  +L  C     + EGK+
Sbjct: 345 YKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKK 404

Query: 240 LHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
           L  +   L  +  K+     ++ +  + G++ +A      + +Q +   W +++   + +
Sbjct: 405 LFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVY 464

Query: 298 GDYE 301
            + E
Sbjct: 465 NNLE 468


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 331/615 (53%), Gaps = 17/615 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CSR   +  G+  HA++    +    F++ S+ +MYA+CG++     V       D  S 
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSW 171

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC---------GSLSAIDEG 237
           N LL+GY +    ++    F  +    +  N +   +++  C         G +      
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF--K 295
           + +H   +K    +   +++A++ MY K G + +A ++F+ +   NVI   A+I GF  +
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291

Query: 296 QHGDYEK-PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           +  D  +  L L   ++  G+ P+E++F+  L +C        G   H QV+K       
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           ++G+A++D+YSG G + +  +  + + K    V W + I+G  +N+  EEA+  F + VR
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQ-DVVIWTSVISGCVQNELFEEALRLFQESVR 410

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D F  SS++ AC+ L    T EQI    VKS F     +G+S I    + G  + 
Sbjct: 411 CGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDA 470

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACS 533
           A R F ++ + DVVSW+++I +++ +G AR A+ +F +M+   + P N  TFL++L+ACS
Sbjct: 471 ATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACS 530

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H GLV +G + +  M  EYG+ P   H +C+VDLLGRAG+L  A  FI +      A +W
Sbjct: 531 HGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVW 590

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           R L A+CR H D++  + ++ +I++L+P  +A YV L NMY +AG  + A + R LMK +
Sbjct: 591 RSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKER 650

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY 713
            + KEPG SWIE+ + ++ F + +KSH E   +Y K+ +++ ++  I    + ++D    
Sbjct: 651 GVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKVAGI---SSREQDLAGC 707

Query: 714 HSERLAVGFGLISLP 728
           HSE+LAV FG+I LP
Sbjct: 708 HSEKLAVAFGMIHLP 722



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 16/287 (5%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS--GLGEIWEAKKQLKEMGKS 383
           L SCA+L   H+  + HA + +       F+   ++  Y   G+G    A + L EM + 
Sbjct: 9   LRSCAAL--PHVAAV-HAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPRR 65

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            ++VS+N  I  + R      ++  F++        D FTY++ L ACS    + T + +
Sbjct: 66  -NAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAV 124

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H+ +V     + + + +S+   Y +CG   +A RVF      D VSWN+++  Y + G  
Sbjct: 125 HAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAR 184

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSAC------SHSGLVQDGQ--KVFESMVKEYGIL 555
            + + +F  M   G+   +    +++  C      + +G V  G+  +     V + G+ 
Sbjct: 185 EETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLD 244

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA-CR 601
            +    S M+D+  + G L  A+    ++P  P   +   + A  CR
Sbjct: 245 ADLFLASAMIDMYAKRGALTNAVALFKSVP-DPNVIVLNAMIAGFCR 290


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 186/583 (31%), Positives = 308/583 (52%), Gaps = 2/583 (0%)

Query: 118 QFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           QF+I V L  C     +  G   H    K+ +    FV+++L++MY K G I+    V K
Sbjct: 157 QFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFK 216

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +M   ++ S   ++AG        +A  +F ++    V  + +T++  L      S +  
Sbjct: 217 KMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHH 276

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H QT+K  +   + V N L TMY KCG  +    +FE +   +V+SWT +I  + Q
Sbjct: 277 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ 336

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G+ E  +     MR+  + PN+YTF   +++CA+L  +  G   H  V++ G+     V
Sbjct: 337 KGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSV 396

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             +IV +YS  G +  A      + +    +SW+  IA + +    +EA +  S M R  
Sbjct: 397 ANSIVTLYSKSGLLKSASLVFHGITRK-DIISWSTIIAVYSQGGYAKEAFDYLSWMRREG 455

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +EF  SS+L  C  +  L   +Q+H+ ++    +    V S+LI  Y+KCGS E+A 
Sbjct: 456 PKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEAS 515

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F+ +   +++SW +MI  Y+++G +++AI LFEK+   G++P   TF+ VL+ACSH+G
Sbjct: 516 KIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAG 575

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           +V  G   F  M  EY I P + HY C++DLL RAG+L  A   I ++P      +W  L
Sbjct: 576 MVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTL 635

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             +CR H D+    + ++Q+L LDP+ A  ++ L+N+YA  G   +A   RKLMK K + 
Sbjct: 636 LRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVI 695

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           KE G SW+ V +K+  F + +++H +   +   L+ L   I D
Sbjct: 696 KERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANIGD 738



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 202/405 (49%), Gaps = 9/405 (2%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP----NHYTYSTMLAICGSLS 232
           +M + D  S   L+AGY   +   +A   F     + VQP    + +  S  L  CG   
Sbjct: 115 KMTHRDEISWTTLIAGYVNASDSYEALILF---SNMWVQPGLQRDQFMISVALKACGLGV 171

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            I  G+ LH  ++K   ++   VS+AL+ MY+K G +E    VF+ + +RNV+SWTAII 
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIA 231

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G    G   + L     M    +  + +TF +AL + A     H G   H Q IK+G   
Sbjct: 232 GLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 291

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FV   +  MY+  G+  +   +L E  K    VSW   I  + +  + E A+EAF +M
Sbjct: 292 SSFVINTLATMYNKCGKA-DYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRM 350

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            +++ + +++T+++++ AC+ L      EQIH  +++      + V +S++  Y+K G  
Sbjct: 351 RKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLL 410

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           + A  VF  +T  D++SW+++I  YSQ G A++A      M  EG +P      +VLS C
Sbjct: 411 KSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVC 470

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
               L++ G++V  + V   GI  E   +S ++ +  + G +E A
Sbjct: 471 GSMALLEQGKQV-HAHVLCIGIDHEAMVHSALISMYSKCGSVEEA 514


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 196/636 (30%), Positives = 340/636 (53%), Gaps = 16/636 (2%)

Query: 116  DKQFVIEVLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            +K   I +L+ CS  E L+ GR+ H+LI T+     +  V   LV+MY KCG I     V
Sbjct: 436  NKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELV 495

Query: 175  VKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
             K+MP     + + N +L  YA+N    +AF   +++    V P+  +++++L+ C    
Sbjct: 496  FKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---Y 552

Query: 233  AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
               E + L    ++  Y S   +  AL++M+ +C  +E A SVF+ +   +V+SWTA+++
Sbjct: 553  CSQEAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVS 611

Query: 293  GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
               ++ D+++   L   M+ +G+ P+++T    L +C       +G + HA V + G+  
Sbjct: 612  ATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEA 671

Query: 353  GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
               V  A+++MYS  G+ W       E  K+   VSWN   A + +    +EA+  F  M
Sbjct: 672  DIAVENALLNMYSNCGD-WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHM 730

Query: 413  VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                   D+ T+S+ L        ++  +  H    +S  +S+V V + L++ Y KCG  
Sbjct: 731  QLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKL 790

Query: 473  EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
            ++A  +F       VV  N++I A +Q+G + +A+ +F KM  EG+RP  +T ++++SAC
Sbjct: 791  DEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISAC 850

Query: 533  SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             H+G+V++G   F +M + +GI P   HY+C VDLLGRAG+LE A   I  +P +    +
Sbjct: 851  GHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLV 910

Query: 593  WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
            W  L   C+   D ++ E  +++ILELDP ++A +V LSN+Y   G   DA+  RK +  
Sbjct: 911  WTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLD 970

Query: 653  KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY---EKLKQLMQQI-----EDIGHTD 704
            + +   PG SW+E+  +++ F + ++SH +  ++Y   +KL+ LM++      + +   D
Sbjct: 971  QNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGLDAED 1030

Query: 705  NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              KE  + YHSER+A+ FGLI+ P     +  + L 
Sbjct: 1031 ELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLR 1066



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 237/496 (47%), Gaps = 16/496 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D Q    +L  C     L  G+R H LI    +    F+   L+NMY +CG ++   A+ 
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +M   ++ S   L++  A++  F +AF+ F   L      PN YT   ML  C +   +
Sbjct: 84  SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143

Query: 235 DEGKQLHAQTMKL----QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
             G+ +HA   +L    +  + T V NA++ MY KCG  EDA +VF  + +++V+SWTA+
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203

Query: 291 INGFKQHGD-YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
              + Q    Y   LR+   M    + PN  TF  AL +C SLR+   G   H+ + + G
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAG 260

Query: 350 MALGDFVGTAIVDMYSGLGEIWE-AKKQLKEMG--KSASSVSWNAQIAGFFRNQKTEEAI 406
           +      G A+++MY   G+ WE A    K M   +    VSWNA I+      +  +A+
Sbjct: 261 LGFDPLAGNALINMYGKCGD-WEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAM 319

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLP-SLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
             F ++       +  T  +IL A +          + H RI +S +  +V VG+++I  
Sbjct: 320 AIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISM 379

Query: 466 YNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y KCG +  A  VF ++    DV+SWN+M+ A        K +  F  M++ GI P   +
Sbjct: 380 YAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVS 439

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+A+L+ACS+S  +  G+K+   ++       E +  + +V + G+ G +  A +    +
Sbjct: 440 FIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM 499

Query: 585 PIKPTAPI-WRPLFAA 599
           P+   + + W  +  A
Sbjct: 500 PLPSRSLVTWNVMLGA 515



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 7/197 (3%)

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
           + S  VR D A D   Y+++L++C     LA  ++ H  I  +  E ++ +G+ LI  Y 
Sbjct: 12  SLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYV 71

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFL 526
           +CGS E+A  +FS++   +VVSW ++I A +Q+G   +A  LF  M++E     NS T +
Sbjct: 72  RCGSLEEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLV 131

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS----CMVDLLGRAGKLEIALIFIS 582
           A+L+AC++S  +  G+ +  +M+ E G+  E    +     M+++  + G  E A+    
Sbjct: 132 AMLNACANSRDLAIGRSI-HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFL 190

Query: 583 NLPIKPTAPIWRPLFAA 599
            +P K     W  +  A
Sbjct: 191 TIPEKDVVS-WTAMAGA 206


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 209/634 (32%), Positives = 336/634 (52%), Gaps = 43/634 (6%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           FVI+ ++  S    LE G++ HA++ K     D +V  SL+++Y K G       V ++M
Sbjct: 131 FVIKSVTGIS---SLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEM 187

Query: 179 PYLDIASCNCLLAGYAKNALFD--QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  DI S N +++GY   AL D  ++   F ++     +P+ ++  + L  C  + + + 
Sbjct: 188 PERDIVSWNSMISGYL--ALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNM 245

Query: 237 GKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           GK+LH   ++ +       V  ++L MY K G +  AE +F+ ++QRN+++W  +I  + 
Sbjct: 246 GKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYA 305

Query: 296 QHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           ++         +C  +   ++G+ P+  T    L +CA L     G   H   ++RG   
Sbjct: 306 RNSRVTDAF--LCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLP 359

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              + TA++DMY   G++  A+     + +  + +SWN+ IA + +N K   A+E F ++
Sbjct: 360 HIVLDTALIDMYGEWGQLKSAEVIFDRIAEK-NLISWNSIIAAYVQNGKNYSALELFQKL 418

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             +    D  T +SIL A +   SL+   QIH+ IVKS++ SN  + +SL+  Y  CG  
Sbjct: 419 WDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDL 478

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           EDA + F+ +   DVVSWNS+I AY+ +G  R ++ LF +M+   + P  STF ++L+AC
Sbjct: 479 EDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAAC 538

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S SG+V +G + FESM +EYGI P   HY  M+DL+GR G    A  FI  +P  PTA I
Sbjct: 539 SISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARI 598

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L  A R H+D+ +AEF ++QI +++ D+   YV L NMYAEA    D    + LM+ 
Sbjct: 599 WGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMES 658

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVL 712
           K IS+    S +E  +K +   + ++SH E  K+YE L  + + I      + E+ED  +
Sbjct: 659 KGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMI-----GEEEEEDSYV 713

Query: 713 Y--------------------HSERLAVGFGLIS 726
           +                    HS RLA  FGLIS
Sbjct: 714 HYVSKLRRETLAKSRSNSPRRHSVRLATCFGLIS 747



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 276/532 (51%), Gaps = 19/532 (3%)

Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
           +A  G ++  + +  +M   D    N ++ G+    L+ +A   + ++    V+ + +TY
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
             ++     +S+++EGK++HA  +KL+++S   V N+L+++Y+K G   DAE VFE + +
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+++SW ++I+G+    D  + L L   M + G  P+ ++   AL +C+ + + +MG   
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 342 HAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H   ++  +  GD  V T+I+DMYS  GE+  A++  K + +  + V+WN  I  + RN 
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQR-NIVAWNVLIGCYARNS 308

Query: 401 KTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           +  +A   F +M  +N    D  T  ++L AC++L        IH   ++  F  ++ + 
Sbjct: 309 RVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFLPHIVLD 364

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++LI+ Y + G  + AE +F ++   +++SWNS+I AY QNG+   A+ LF+K+    + 
Sbjct: 365 TALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLL 424

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           P ++T  ++L A + S  + +G+++   +VK  YG        + +V +    G LE A 
Sbjct: 425 PDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYG--SNTIILNSLVHMYAMCGDLEDAR 482

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAE 636
              +++ +K     W  +  A   H   +++  +  +++  ++DP+ +  + +L    + 
Sbjct: 483 KCFNHVLLKDVVS-WNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKST-FASLLAACSI 540

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCS----WIEVYNKIYRFFSQNKSHSEMP 684
           +G+  +  E  + MK +E   +PG       +++  +   F S  +   EMP
Sbjct: 541 SGMVDEGWEYFESMK-REYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMP 591



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 4/189 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   +  +L   +    L  GR+ HA I K+    +  +  SLV+MYA CGD++    
Sbjct: 424 LPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARK 483

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
               +   D+ S N ++  YA +     +   F ++    V PN  T++++LA C     
Sbjct: 484 CFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGM 543

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAI 290
           +DEG + + ++MK +Y     + +   +L +  + G    A+  + E         W ++
Sbjct: 544 VDEGWE-YFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSL 602

Query: 291 INGFKQHGD 299
           +N  + H D
Sbjct: 603 LNASRNHND 611



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 49/88 (55%)

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  +   G  EDA ++F ++  AD   WN MIK ++  G   +A+ L+ +MV  G++  +
Sbjct: 67  LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADS 126

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVK 550
            T+  V+ + +    +++G+K+   ++K
Sbjct: 127 FTYPFVIKSVTGISSLEEGKKIHAMVIK 154


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/578 (32%), Positives = 307/578 (53%), Gaps = 34/578 (5%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE------GKQLHAQTMKL 247
           A    F  A + FL++   D  P     S + ++ G+L +         G  LHA  ++ 
Sbjct: 30  ASQGDFHHAIALFLRMRASD--PAAACSSVLTSLPGALKSCAALGLRALGASLHALALRS 87

Query: 248 QYLSKTAVSNALLTMYIKCG--------------MMEDAESVFEGLVQRNVISWTAIING 293
              +    +NALL +Y K                ++E    VF+ + +++V+SW  ++ G
Sbjct: 88  GAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLG 147

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             + G + + L LV  M  DG  P+ +T +  L   A   +   G   H    + G    
Sbjct: 148 CAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDD 207

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FVG++++DMY+       + K    +     ++ WN+ +AG  +N   +EA+  F +M+
Sbjct: 208 VFVGSSLIDMYANCTRTDYSVKVFDNL-PVRDAILWNSMLAGCAQNGSVDEALGLFRRML 266

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +       T+SS++ AC  L SL   +Q+H+ +++  F+ NV + SSLI+ Y KCG+  
Sbjct: 267 HSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A R+F ++ + D+VSW +MI  ++ +G AR+A++LF++M +  ++P + TFLAVL+ACS
Sbjct: 327 IARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACS 386

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV  G K F SM   YGI+P   H++ + D LGR GKLE A  FIS + IKPTA +W
Sbjct: 387 HAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVW 446

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  AC+ H +  +AE ++K+I +L+P     ++ LSN Y+ +G   +A   RK M+ K
Sbjct: 447 STLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKK 506

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-------- 705
            + KEP CSWIEV NK + F + +KSH    ++ + L    +Q+   G+  N        
Sbjct: 507 GMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTDDVFQDI 566

Query: 706 --EKEDRVL-YHSERLAVGFGLISLPAKNKFECSRTLE 740
             E+++ VL  HSE+LA+ FG+IS P        + L 
Sbjct: 567 EEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLR 604



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/564 (24%), Positives = 233/564 (41%), Gaps = 79/564 (14%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD--------------IK 169
           L  C+      LG   HAL  ++    D+F   +L+N+Y K                 ++
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           S+  V  +MP  D+ S N L+ G A++    +A     ++     +P+ +T S++L I  
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
             + +  G +LH    +  +     V ++L+ MY  C   + +  VF+ L  R+ I W +
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           ++ G  Q+G  ++ L L   M   GI P   TF+  + +C +L +  +G   HA VI+ G
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                F+ ++++DMY   G +  A++    + +S   VSW A I G   +    EA+  F
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRI-QSPDIVSWTAMIMGHALHGPAREALVLF 363

Query: 410 SQMVRNDAACDEFTYSSILKACS--------------------LLPSL------------ 437
            +M   +   +  T+ ++L ACS                    ++PSL            
Sbjct: 364 DRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGR 423

Query: 438 -ATCEQIHSRIVKSKFESNVHVGSSLIEA----YNKCGSWEDAERVFSQLTAADVVSWNS 492
               E+ ++ I   K +    V S+L+ A     N   + E A+++F  L    + S   
Sbjct: 424 PGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIF-DLEPRSMGSHII 482

Query: 493 MIKAYSQNGRARKAIILFEKMVVEG---------IRPTNSTFLAVLSACSHSGL--VQDG 541
           +   YS +GR  +A  L + M  +G         I   N   + V    SH     + D 
Sbjct: 483 LSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDA 542

Query: 542 QKVFESMVKEYGILP---------EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
             VF   +   G +P         EE   + +  L G + KL I    IS  P   T  +
Sbjct: 543 LNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSV--LCGHSEKLAIVFGIIST-PPGTTIRV 599

Query: 593 WRPLFAACRCHSDLKMAEFISKQI 616
            + L     CH+   + +FISK +
Sbjct: 600 MKNLRVCVDCHT---VTKFISKIV 620


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 202/646 (31%), Positives = 332/646 (51%), Gaps = 43/646 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS CS+      G + H ++ K  +  D FV  SL++ YA CG +     V  +M   +
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 187

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   L+ GY+   +  +A   F ++  + V+PN  T    ++ C  L  ++ GK++  
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 247

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +L   S T V NALL MY+KCG M     +F+    +N++ +  I++ + QHG   +
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L ++  M + G  P++ T    +A+CA L +  +G   HA V + G+   D +  AI+D
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIID 367

Query: 363 MY----------------------------SGL---GEIWEAKKQLKEMGKSASSVSWNA 391
           MY                            +GL   GE+  A +   EM +S + VSWN 
Sbjct: 368 MYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPES-NLVSWNT 426

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I    +    EEAI+   +M       D  T   I  AC  L +L   + I++ I K+ 
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
              ++ +G++L++ +++CG   +A RVF  +   DV +W + I+  +  G A+ AI LF+
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M+ + ++  +  F+A+L+A SH G V  G+++F +M K +G+ P+  HY CMVDLLGRA
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G LE A   + ++PIKP   IW    AACR H +++ A +  ++I +L P+   ++V LS
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLS 666

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YA AG   D    R  MK K   K  G S IEV+  I  F S ++SH+E  ++   L+
Sbjct: 667 NIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQ 726

Query: 692 QLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           ++  +I  +G+            + EKE  +  HSE+LA+ +GLI+
Sbjct: 727 EINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLIN 772



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 231/487 (47%), Gaps = 36/487 (7%)

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
           +CN L+ GYA + L  +A   +L +  +  + P+++T+  +L+ C  + A  EG Q+H  
Sbjct: 88  TCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGV 147

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K+  +    V+N+L+  Y  CG ++    VF+ +++RNV+SWT++ING+      ++ 
Sbjct: 148 VVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEA 207

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           + L   M E G++PN  T   A+++CA L++  +G      + + G+     V  A++DM
Sbjct: 208 VCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDM 267

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G+++  ++   E     + V +N  ++ + ++    E +    +M++     D+ T
Sbjct: 268 YMKCGDMYAVREIFDEF-SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 326

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG------------- 470
             S + AC+ L  L+  +  H+ + ++  E   ++ +++I+ Y KCG             
Sbjct: 327 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 386

Query: 471 -----SW-------------EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
                +W             E A R+F ++  +++VSWN+MI A  Q     +AI L  +
Sbjct: 387 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 446

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M  +GI+    T + + SAC + G + D  K   + +++  I  +    + +VD+  R G
Sbjct: 447 MQNQGIKGDRVTMVGIASACGYLGAL-DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCG 505

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLS 631
               A+    N+  K     W           + K A  +  ++L+ D   D  V+V L 
Sbjct: 506 DPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALL 564

Query: 632 NMYAEAG 638
             ++  G
Sbjct: 565 TAFSHGG 571



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 2/195 (1%)

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLAT 439
           G   S  + N  I G+  +   +EAI  +  M+       D FT+  +L ACS + + + 
Sbjct: 81  GTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSE 140

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+H  +VK     ++ V +SLI  Y  CG  +   +VF ++   +VVSW S+I  YS 
Sbjct: 141 GVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV 200

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
              A++A+ LF +MV  G+ P   T +  +SAC+    ++ G+KV   M  E G+     
Sbjct: 201 VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMT-ELGVKSNTL 259

Query: 560 HYSCMVDLLGRAGKL 574
             + ++D+  + G +
Sbjct: 260 VVNALLDMYMKCGDM 274



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 87/443 (19%), Positives = 178/443 (40%), Gaps = 75/443 (16%)

Query: 19  PYPVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKG 78
           P PV        C   K +E+ +       C L  +     G+ ++ L+ N  +++  K 
Sbjct: 221 PNPVTMVCAISACAKLKDLELGK-----KVCNLMTE----LGVKSNTLVVNALLDMYMK- 270

Query: 79  ISRNGYSTRN--DSFPD-----------GFIDDGCSNTVPVTCYSLESLL------DKQF 119
              + Y+ R   D F D            ++  G +  V V    L+ +L      DK  
Sbjct: 271 -CGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVV---LDEMLQKGQRPDKVT 326

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC-------------- 165
           ++  ++ C++   L +G+  HA + +  +     ++ ++++MY KC              
Sbjct: 327 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 386

Query: 166 -----------------GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
                            G+++  + +  +MP  ++ S N ++    + ++F++A     +
Sbjct: 387 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 446

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    ++ +  T   + + CG L A+D  K ++    K        +  AL+ M+ +CG 
Sbjct: 447 MQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGD 506

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +A  VFE + +R+V +WTA I      G+ +  + L   M +  +  +++ F   L +
Sbjct: 507 PLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTA 566

Query: 329 CASLRNSHMGY------MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
                 SH GY      +F A     G++        +VD+    G + EA   +K M  
Sbjct: 567 F-----SHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPI 621

Query: 383 SASSVSWNAQIAGFFRNQKTEEA 405
             + V W + +A   +++  E A
Sbjct: 622 KPNDVIWGSFLAACRKHKNVEFA 644


>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 186/535 (34%), Positives = 297/535 (55%), Gaps = 9/535 (1%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S N +   Y++++   +  + +  +      P++Y++  +L  C  LS + +G+++H
Sbjct: 91  NVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIH 150

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGD 299
           + T+KL       V NAL++ +  CG +E A +VF+ L  + R+V+SW ++I+G+ Q   
Sbjct: 151 SSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHR 210

Query: 300 YEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           YE  L++   +  DG + P+E T   AL+ C  L    +G   H      G  L  FVG+
Sbjct: 211 YELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGS 270

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMYS  G+I +A+K    +    ++V W + IAG+ ++   +EAIE F +M     A
Sbjct: 271 SLIDMYSKCGQIEDARKVFDRI-PHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFA 329

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  T + +L AC    +LA    IH    ++  E +++  ++LI  Y+KCG  + A  +
Sbjct: 330 ADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEI 389

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGL 537
           F  LT  D+ SW+++I   + NG + KA+ LF +M ++  IRP   TFL VL AC+H G 
Sbjct: 390 FHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGF 449

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V  G   F +M + Y + P   HY CMVDLLGRA  L  A  FI  LPI+P   IWR L 
Sbjct: 450 VDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLL 509

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H ++++AEF +KQI EL+P      V LSN+YA A    D +  RK M  + I K
Sbjct: 510 FACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKK 569

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL----KQLMQQIEDIGHTDNEKE 708
           +PGCS++E+   ++  F  ++SH EM  +YE +    K L  +  D G  D++++
Sbjct: 570 QPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQSKGFDPGILDHQEQ 624



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 24/321 (7%)

Query: 247 LQYLSKTAVSNALLTMYIKCGMMED--------------------AESVFEGLVQRNVIS 286
           LQ LS     N +L+  I  G+  D                    + ++F  + + NV S
Sbjct: 35  LQNLSHPRSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFS 94

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  +   + +     + + L  LM  +G  P+ Y+F   L +CA L   H G   H+  +
Sbjct: 95  WNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTL 154

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEE 404
           K G+ L  FV  A++  +S  G + EA + + +M  +     VSWN+ I+G+ ++ + E 
Sbjct: 155 KLGVHLDVFVQNALISAFSSCGAV-EAARAVFDMLPALVRDVVSWNSMISGYLQSHRYEL 213

Query: 405 AIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           A++ F +++ + + + DE T  S L  C  L  L   ++IH     S F  +V VGSSLI
Sbjct: 214 ALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLI 273

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y+KCG  EDA +VF ++   + V W SMI  Y+Q+   ++AI LF +M + G     +
Sbjct: 274 DMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAA 333

Query: 524 TFLAVLSACSHSGLVQDGQKV 544
           T   VLSAC H G +  G+ +
Sbjct: 334 TIACVLSACGHWGALAQGRWI 354



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 162/315 (51%), Gaps = 7/315 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
           VL  C+R   L  GR  H+   K  V  D FV  +L++ ++ CG +++  AV   +P L 
Sbjct: 133 VLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALV 192

Query: 182 -DIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            D+ S N +++GY ++  ++ A   F +L  DG  + P+  T  + L++CG L  +D GK
Sbjct: 193 RDVVSWNSMISGYLQSHRYELALKVFWELLGDG-SLSPDEVTLVSALSVCGRLGLLDLGK 251

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H       ++    V ++L+ MY KCG +EDA  VF+ +  RN + WT++I G+ Q  
Sbjct: 252 KIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSD 311

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            +++ + L   M+  G   +  T    L++C        G   H    +  + +      
Sbjct: 312 LFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARN 371

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDA 417
           A++ MYS  G+I +A +    + +     SW+A I+G   N ++++A+  FSQM + +D 
Sbjct: 372 ALIGMYSKCGDIQKALEIFHGLTQ-PDIFSWSAVISGLAMNGESDKALHLFSQMEMISDI 430

Query: 418 ACDEFTYSSILKACS 432
             +E T+  +L AC+
Sbjct: 431 RPNEITFLGVLCACN 445



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 139/283 (49%), Gaps = 12/283 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++  LS C R   L+LG++ H L T +    D FV +SL++MY+KCG I+    V 
Sbjct: 230 DEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVF 289

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++P+ +      ++AGYA++ LF +A   F ++       +  T + +L+ CG   A+ 
Sbjct: 290 DRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALA 349

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+ +H    +          NAL+ MY KCG ++ A  +F GL Q ++ SW+A+I+G  
Sbjct: 350 QGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLA 409

Query: 296 QHGDYEKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKR 348
            +G+ +K L L   M     I PNE TF   L +C     +H G      Y F+A     
Sbjct: 410 MNGESDKALHLFSQMEMISDIRPNEITFLGVLCAC-----NHGGFVDKGLYYFNAMTQIY 464

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
            +  G      +VD+      + EA+K ++ +      V W +
Sbjct: 465 NLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRS 507



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 1/108 (0%)

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F Q+   +V SWN M +AYS++    + I L+  M+  G  P N +F  VL AC+   L
Sbjct: 83  LFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSL 142

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           +  G+++  S +K  G+  +    + ++      G +E A      LP
Sbjct: 143 LHKGREIHSSTLK-LGVHLDVFVQNALISAFSSCGAVEAARAVFDMLP 189


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 194/616 (31%), Positives = 337/616 (54%), Gaps = 66/616 (10%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y K G++ +  A+  QMP  D+ S N +L+G+A+N   ++A   F ++    +  N
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKN 183

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ----------YLSKTAVSNA--------- 258
             +++ +L+       I++ ++L    M  +          Y+ K  + +A         
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243

Query: 259 --------LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
                   ++T Y + G++ +A  +FE L  R+V +WTA+++GF Q+G  ++  R+    
Sbjct: 244 RDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF--- 300

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT-------AIVDM 363
            E+  + NE ++   +A          GY+  +Q I++   L D + +        +V  
Sbjct: 301 -EEMPEKNEVSWNAMIA----------GYV-QSQQIEKARELFDQMPSRNTSSWNTMVTG 348

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G I +AK    EM +    +SW A I+G+ ++ ++EEA+  F +M R+    +   
Sbjct: 349 YAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +  L +C+ + +L   +Q+H R+VK+ F++    G++L+  Y KCGS E+A  VF  +T
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D+VSWN+MI  Y+++G  ++A+ LFE M +  I+P + T + VLSACSH+GLV  G +
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGME 526

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            F SM + YGI     HY+CM+DLLGRAG+L+ AL  + ++P  P A  W  L  A R H
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            D ++ E  ++++ E++PD++ +YV LSN+YA +G   +  E R  M+ K + K PG SW
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVL 712
           +E+ NK + F   + SH E  ++Y  L++L  +++  G             + EKE  + 
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLK 706

Query: 713 YHSERLAVGFGLISLP 728
           YHSE+LAV FG++S+P
Sbjct: 707 YHSEKLAVAFGILSIP 722



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/482 (20%), Positives = 212/482 (43%), Gaps = 59/482 (12%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           DI   N  ++ Y +    + A S F   +G+  + +  TY+ M++   S +  D  +++ 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVF---NGMR-RRSTVTYNAMISGYLSNNKFDCARKVF 114

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +      +S     N +L+ Y+K G +  A ++F  + +++V+SW A+++GF Q+G  E
Sbjct: 115 EKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALAS---------CASLRNSHMGYMFHAQVIKRGMAL 352
           +  ++   M    +  NE ++   L++            L +S M +    +++     +
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW----EIVSWNCLM 222

Query: 353 GDFVGTAIVD----------------------MYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           G +V    +D                       Y+  G + EA++  +E+       +W 
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL-PIRDVFAWT 281

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A ++GF +N   +EA   F +M   +        +  +++  +  +    +Q+ SR    
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR---- 337

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               N    ++++  Y +CG+ + A+ +F ++   D +SW +MI  Y+Q+G++ +A+ LF
Sbjct: 338 ----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            KM  +G     S     LS+C+    ++ G+++   +VK  G        + ++ + G+
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGK 452

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI-LELDPDDAAVYVT 629
            G +E A     ++  K     W  + A    H   K A  + + + + + PDD  +   
Sbjct: 453 CGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGV 511

Query: 630 LS 631
           LS
Sbjct: 512 LS 513



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYM---NIEEKGISRNGYSTRN----DSFPDGFIDDGC 100
           A +LF++ P R   S+ + +  GY    NI++  I  +    R+     +   G+   G 
Sbjct: 327 ARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ 385

Query: 101 SNTVPVTCYSLE---SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           S         ++    +L++  +   LS C+    LELG++ H  + K           +
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+ MY KCG I+    V + +   DI S N ++AGYA++    +A + F  +  + ++P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPD 504

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVF 276
             T   +L+ C     +D+G +      +   ++  A     ++ +  + G +++A ++ 
Sbjct: 505 DVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564

Query: 277 EGL-VQRNVISWTAIINGFKQHGDYE 301
           + +    +  +W A++   + HGD E
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTE 590


>gi|297734798|emb|CBI17032.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 194/589 (32%), Positives = 331/589 (56%), Gaps = 23/589 (3%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F+T  +VNMYAKCG +        +M   +I S   L++ YA++   D+ F  F  +  I
Sbjct: 91  FLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDML-I 149

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK-CGMMED 271
             +P  + ++++++  G     D G+Q+HA  +K  + S   V N L+ MY + CG  ++
Sbjct: 150 CHRPTEFAFASVISTSGGDG--DCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDE 207

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A +V+E +  RN++SW  +I GF+  G   + L +   M   GI  +  T  V + SC  
Sbjct: 208 AWNVYEAMGFRNLVSWNFMITGFQVCGCGNRALEIFSQMHFGGIRFDRATL-VNIFSCLC 266

Query: 332 LRNSHMGYMFHAQVI--KRGMALGDFVGTAIVDMYSGLG-EIWEAKKQLKEMGKSASSVS 388
                +   F  Q +  K G      V T +V  YS LG E+ +  +   E+      VS
Sbjct: 267 GMGDGLECCFQLQCLTTKTGFISEIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVVS 326

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W   IA  F  +  EEA   F Q +R   A D   +S +LKAC+ L +      + S ++
Sbjct: 327 WTGIIA-VFAERDPEEAFLLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVL 385

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K  FE ++ + ++LI    +CGS   +++ F ++ + D VSWNSM+KAY+ +G+ ++A+ 
Sbjct: 386 KVGFEDDIVLTNALIHTCARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQ 445

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF +M  +   P  +TF+A++SACSH+G+V++G K+FE+M   +GI+P+  HY+CMVD+L
Sbjct: 446 LFSQMDAQ---PDGATFVALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDIL 502

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG++  A   I  +P++P + +W  L   CR H + K A+  + ++ ELDP+++  Y+
Sbjct: 503 GRAGRIYEAKELIDKMPMEPDSMVWSALLGGCRKHGETKFAKLAAVKLKELDPNNSLGYI 562

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            +SN+++  G   +A   R+ M+ K + KEPG SWI+V N+++ F S  + H E   +  
Sbjct: 563 LMSNIFSTNGHFNEARLIRREMERKTVRKEPGLSWIQVGNQVHEFASGGQQHPEKEALCA 622

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           +L++L++Q++D+G+            D  KE+++ YHSE++A+ F L++
Sbjct: 623 RLEELVRQLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKMALVFSLMN 671



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 42/407 (10%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAK-CGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           + GR+ HAL  KT+     +V   L+ MY + CG       V + M + ++ S N ++ G
Sbjct: 170 DCGRQVHALAVKTSFDSCVYVGNVLIMMYCRSCGGTDEAWNVYEAMGFRNLVSWNFMITG 229

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA-ICGSLSAIDEGKQLHAQTMKLQYLS 251
           +      ++A   F ++    ++ +  T   + + +CG    ++   QL   T K  ++S
Sbjct: 230 FQVCGCGNRALEIFSQMHFGGIRFDRATLVNIFSCLCGMGDGLECCFQLQCLTTKTGFIS 289

Query: 252 KTAVSNALLTMYIKC-GMMEDAESVFEGLVQR-NVISWTAIINGFKQHGDYEKPLRLVCL 309
           +  V   L+  Y    G + D   +F  L  R +V+SWT II  F +    E  L     
Sbjct: 290 EIEVPTGLVKAYSSLGGEVNDCYRIFLELDGRQDVVSWTGIIAVFAERDPEEAFLLFRQF 349

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           +RE  + P+ + F++ L +CA L          + V+K G      +  A++   +  G 
Sbjct: 350 LRE-CLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTCARCGS 408

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  +K+   ++G S  +VSWN+ +  +  + + +EA++ FSQM   DA  D  T+ +++ 
Sbjct: 409 VALSKQAFDKIG-SRDTVSWNSMLKAYAMHGQGKEALQLFSQM---DAQPDGATFVALIS 464

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS           H+ +V+         G+ + EA +      +   +  QL       
Sbjct: 465 ACS-----------HAGMVEE--------GAKIFEAMS------NNHGIVPQLD-----H 494

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +  M+    + GR  +A  L +KM +E   P +  + A+L  C   G
Sbjct: 495 YACMVDILGRAGRIYEAKELIDKMPME---PDSMVWSALLGGCRKHG 538



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 22/250 (8%)

Query: 114 LLDKQFVIEVLSYCSR------EECLELGRRYHALITKTAVC-----GDQFVTASLVNMY 162
           LL +QF+ E L+          + C  L    HAL  ++ V       D  +T +L++  
Sbjct: 344 LLFRQFLRECLAPDRHMFSIVLKACAGLATEGHALTVQSHVLKVGFEDDIVLTNALIHTC 403

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           A+CG +        ++   D  S N +L  YA +    +A   F ++D    QP+  T+ 
Sbjct: 404 ARCGSVALSKQAFDKIGSRDTVSWNSMLKAYAMHGQGKEALQLFSQMDA---QPDGATFV 460

Query: 223 TMLAICGSLSAIDEG-KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-V 280
            +++ C     ++EG K   A +     + +      ++ +  + G + +A+ + + + +
Sbjct: 461 ALISACSHAGMVEEGAKIFEAMSNNHGIVPQLDHYACMVDILGRAGRIYEAKELIDKMPM 520

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           + + + W+A++ G ++HG+ +        ++E  +DPN     + +++  S      G+ 
Sbjct: 521 EPDSMVWSALLGGCRKHGETKFAKLAAVKLKE--LDPNNSLGYILMSNIFSTN----GHF 574

Query: 341 FHAQVIKRGM 350
             A++I+R M
Sbjct: 575 NEARLIRREM 584



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N+ + + ++  Y KCG  + A + F ++   ++VSW +++  Y+Q+G   +   +F  M+
Sbjct: 89  NLFLTNHVVNMYAKCGLLDYAHQWFDEMLERNIVSWTALVSRYAQHGWPDECFRVFTDML 148

Query: 515 VEGIRPTNSTFLAVLSACSHSG 536
           +   RPT   F +V+S     G
Sbjct: 149 I-CHRPTEFAFASVISTSGGDG 169


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 179/514 (34%), Positives = 283/514 (55%), Gaps = 12/514 (2%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           KQ+HAQ      +    V+N LL M  K   +  A  +F  + +R+ +SW+ +I GF ++
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKN 79

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GDYE+  +    +   G  P+ ++    + +C       MG + H+ V+K G+ L +FV 
Sbjct: 80  GDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVC 139

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           + +VDMY+  G I  AK+    M K    V+    IAG+    K  E+   F QM R+  
Sbjct: 140 STLVDMYAKCGMIDNAKQLFDRMPKK-DLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+    +I+ AC+ L ++     +H  +   ++  +V +G+++I+ Y KCGS + +  
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F ++   +V+SW++MI AY  +G+ R+A+ LF  M+  GI P   TF+++L ACSH+GL
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V DG ++F  M   YG+ P+  HY+CMVDLLGRAG+L+ AL  I N+ ++    IW    
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H  + +AE  +K +L L   +   Y+ LSN+YA AG   D  + R LM  + + K
Sbjct: 379 GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKK 438

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEK 707
            PG +WIEV N IYRF + + SH    ++YE LK L Q++E  G+           D E 
Sbjct: 439 IPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEV 498

Query: 708 EDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           +  +L+ HSE+LA+ FGLI+ P       ++ L 
Sbjct: 499 KLGILHAHSEKLAIAFGLIATPDGTPIRITKNLR 532



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 23/281 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C     L +GR  H+ + K  +  D FV ++LV+MYAKCG I +   +  +MP  D
Sbjct: 107 VIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKD 166

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   ++AGYA+    ++++  F ++      P+     T++  C  L A+++ + +H 
Sbjct: 167 LVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHD 226

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                +Y     +  A++ MY KCG ++ +  +F+ + Q+NVISW+A+I  +  HG   +
Sbjct: 227 YVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGRE 286

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG----- 357
            L L  +M   GI PN  TF   L +C+           HA ++  G+ L   +      
Sbjct: 287 ALELFHMMLNSGIIPNRITFISLLYACS-----------HAGLVDDGLQLFSLMSVSYGV 335

Query: 358 -------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
                  T +VD+    G + +A + ++ M        W A
Sbjct: 336 RPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCA 376



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 26/254 (10%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A QLF++ PK+  L T  ++  GY    E G     +   +    DGF        VP 
Sbjct: 154 NAKQLFDRMPKK-DLVTRTVMIAGY---AECGKPNESWVLFDQMRRDGF--------VP- 200

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                    DK  ++ +++ C++   +   R  H  +       D  +  ++++MYAKCG
Sbjct: 201 ---------DKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCG 251

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            I S   +  +M   ++ S + ++  Y  +    +A   F  +    + PN  T+ ++L 
Sbjct: 252 SIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLY 311

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRN 283
            C     +D+G QL +  M + Y  +  V +   ++ +  + G ++ A  + E + V+++
Sbjct: 312 ACSHAGLVDDGLQLFS-LMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKD 370

Query: 284 VISWTAIINGFKQH 297
              W A +   + H
Sbjct: 371 EGIWCAFLGACRIH 384


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/632 (31%), Positives = 342/632 (54%), Gaps = 19/632 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C   + L+ GR  H+L+ K     +   + +L+ MY+  G  +    V + M   D
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKD 297

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++A YA++     A      +  +    N+ T+++ LA C       EGK LHA
Sbjct: 298 MISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHA 357

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             + +       V NAL+T+Y K G+M +A+ VF+ + +R+ ++W A+I G   H D E+
Sbjct: 358 LVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG---HADSEE 414

Query: 303 P---LRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGT 358
           P   L+   LMRE+G+  N  T +  L +C +  +    G   HA +I  G    ++V  
Sbjct: 415 PDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQN 474

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++ MY+  G++  +      +    +S   NA +A    +   EEA++   +M R    
Sbjct: 475 SLITMYAKCGDLNSSNNIFDRLTSKNASAW-NAMMAANAHHGHMEEALKFLLEMRRAGVN 533

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            DEF++S  L A + L  L   +Q+H   VK   +SN  V S+ ++ Y KCG  +D  R+
Sbjct: 534 VDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRI 593

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
             +      +SWN +  ++S++G   KA   F +M+  G++P + TF+++LSACSH G+V
Sbjct: 594 IPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMV 653

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G   ++SM+KE+GI  +  H  C++DLLGR+G+   A  FI  +P+ PT  +WR L A
Sbjct: 654 EEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLA 713

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           AC+ H +L++     + +L+LDP D + YV  SN+ A  G   D E+ R+ M + +I K+
Sbjct: 714 ACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKK 773

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKE 708
           P CSW+++ NK+  F   + SH +  ++Y KL++L + I++ G+          TD E++
Sbjct: 774 PACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQK 833

Query: 709 DRVLY-HSERLAVGFGLISLPAKNKFECSRTL 739
           +  L+ HSERLA+ +GLIS P  +  +  + L
Sbjct: 834 EHNLWNHSERLALAYGLISSPEGSTLKIFKNL 865



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/520 (29%), Positives = 262/520 (50%), Gaps = 7/520 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C   E   LG +    + K  +  +  V  SL++M+   G ++    V   M   D
Sbjct: 137 VISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHD 196

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++A Y +N L  ++   F  +  +  + N  T STMLA CGS+  +  G+ +H+
Sbjct: 197 TISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHS 256

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + S    SN L+TMY   G  EDAE VF+G+V++++ISW +++  + Q G+   
Sbjct: 257 LVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLD 316

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L+  M       N  TFT ALA+C+    +  G + HA VI  G+     VG A+V 
Sbjct: 317 ALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVT 376

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+  G + EAKK  + M K    V+WNA I G   +++ +EA++AF  M       +  
Sbjct: 377 LYAKSGLMIEAKKVFQTMPKR-DGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYI 435

Query: 423 TYSSILKACSLLPS--LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           T S++L AC L P+  L     IH+ I+ + F+S+ +V +SLI  Y KCG    +  +F 
Sbjct: 436 TISNVLGAC-LAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFD 494

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +LT+ +  +WN+M+ A + +G   +A+    +M   G+     +F   L+A +   ++++
Sbjct: 495 RLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEE 554

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           GQ++    VK  G        S  +D+ G+ G+++  L  I   PI  +   W  L ++ 
Sbjct: 555 GQQLHGLAVK-LGCDSNPFVASATMDMYGKCGEIDDVLRIIPR-PINRSRLSWNILTSSF 612

Query: 601 RCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGL 639
             H   + A+    +++ L    D   +V+L +  +  G+
Sbjct: 613 SRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGM 652



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 218/446 (48%), Gaps = 8/446 (1%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQ 248
           ++G+ +   + ++  FF ++    V+P+    ++++  C  S   + EG Q+H   +K+ 
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            LS   V  +L+ +Y   G+  DA  VF+ ++ +NV+SWTA++  +  +G+    + +  
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            MR +G+  N+ T +  +++C SL N  +GY     VIK G+     V  +++ M+   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + EA      M +   ++SWN+ IA + RN   +E++  FS M R     +  T S++L
Sbjct: 181 SVEEACYVFSGMDEH-DTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTML 239

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             C  + +L     IHS ++K  + SNV   ++LI  Y+  G  EDAE VF  +   D++
Sbjct: 240 AGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMI 299

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWNSM+  Y+Q+G    A+ L   M          TF + L+ACS      +G K+  ++
Sbjct: 300 SWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEG-KILHAL 358

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           V   G+       + +V L  ++G +  A      +P K     W  L      H+D + 
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMP-KRDGVTWNALIGG---HADSEE 414

Query: 609 AEFISKQILELDPDDAAV-YVTLSNM 633
            +   K    +  +   + Y+T+SN+
Sbjct: 415 PDEALKAFKLMREEGVPINYITISNV 440



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 219/458 (47%), Gaps = 6/458 (1%)

Query: 120 VIEVLSYCSREECLEL-GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           V  +++ C R E + + G + H  I K  +  D FV  SLV++Y   G     + V ++M
Sbjct: 32  VASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEM 91

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            Y ++ S   L+  Y          + + ++    +  N  T S++++ C SL     G 
Sbjct: 92  IYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGY 151

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+    +K    +  +V+N+L++M+   G +E+A  VF G+ + + ISW ++I  + ++G
Sbjct: 152 QVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNG 211

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ LR    M     + N  T +  LA C S+ N   G   H+ V+K G         
Sbjct: 212 LCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASN 271

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++ MYS  G   +A+   + M +    +SWN+ +A + ++    +A++  + M      
Sbjct: 272 TLITMYSDAGRCEDAELVFQGMVEK-DMISWNSMMACYAQDGNCLDALKLLATMFYMRRG 330

Query: 419 CDEFTYSSILKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
            +  T++S L ACS  P  AT  +I H+ ++      NV VG++L+  Y K G   +A++
Sbjct: 331 ANYVTFTSALAACS-DPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKK 389

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSG 536
           VF  +   D V+WN++I  ++ +    +A+  F+ M  EG+     T   VL AC + + 
Sbjct: 390 VFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPND 449

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           L++ G  +  + +   G   +E   + ++ +  + G L
Sbjct: 450 LLEHGMPI-HAFIILTGFQSDEYVQNSLITMYAKCGDL 486


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/530 (34%), Positives = 289/530 (54%), Gaps = 16/530 (3%)

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
           D IDV    +T   +L +C    ++  GK  H   +    ++ T   N L+ +Y KCG  
Sbjct: 52  DLIDV----FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQN 107

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           + A  VF+ +  R++ISW  +I G+  + +  + L+L   M  +G    E+T +  L +C
Sbjct: 108 DCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCAC 167

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A+          H   IK  +    FVGTA +D+Y+    I +A    + M +  +SV+W
Sbjct: 168 AAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEK-TSVTW 226

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           ++  AGF +N   EE +  F    R      EFT SSIL  C+ L  +    Q+H+ IVK
Sbjct: 227 SSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVK 286

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
             F  N+ V +SL++ Y KCG  E +  VF+ +   +VV WN+MI ++S++  + +A+IL
Sbjct: 287 HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMIL 346

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           FEKM   GI P   T+L++LSACSH+GLV++G+  F  ++ +    P   HYSCMVD+LG
Sbjct: 347 FEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLG 406

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           R+GK + A   +  +P +PTA +W  L  + R H ++++A   ++Q+  L+P++   +V 
Sbjct: 407 RSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVL 466

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN+YA +G   +    RK ++     KE G SWIE   KI+ F +  + H  +  VY K
Sbjct: 467 LSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNK 526

Query: 690 LKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           L+++  ++  I H  N           +KE+ + +HSE+LA  FGLISLP
Sbjct: 527 LEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLP 576



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 205/419 (48%), Gaps = 5/419 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L+D   + E+L  C++   L +G+  H L     +  D      L+N+Y KCG       
Sbjct: 53  LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARR 112

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   M    I S N ++AGY  N    +A   F ++     Q   +T S+ L  C +  A
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I E KQLH   +KL   S + V  A L +Y KC M++DA  VFE + ++  ++W+++  G
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F Q+G +E+ L L    + +G+   E+T +  L++CASL     G   HA ++K G    
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRN 292

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV T++VD+Y+  G+I ++ +   +M +  + V WNA IA F R+  + EA+  F +M 
Sbjct: 293 LFVATSLVDVYAKCGQIEKSYEVFADM-EEKNVVLWNAMIASFSRHAHSWEAMILFEKMQ 351

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSW 472
           +     +E TY SIL ACS    +       + ++  +  E NV   S +++   + G  
Sbjct: 352 QVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKT 411

Query: 473 EDAERVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           ++A ++  ++      S W S++ +   +   R A I  E++    + P N     +LS
Sbjct: 412 DEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLF--RLEPENGGNHVLLS 468


>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
          Length = 628

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 277/483 (57%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L   YIK G +  A  +F+ + +RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 170

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+        CA LR+   G   HA V++ G+     VG+++  MY   G + E +  
Sbjct: 171 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 230

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ M  S S VS N  IAG  +N  +E A+E F  M     A D  T+ S + +CS L +
Sbjct: 231 LR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAA 289

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH +++K+  +  V V + L+  Y++CG   D+ERVF     +D    ++MI A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KAI LF++M+  G  P++ TFLA+L ACSHSGL ++G   FE M K YG+ P
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 409

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P+ P   IW+ L +AC+   +  MAE I+K++
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 469

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  E RK M+   + KEPG SW+E+   I++F + 
Sbjct: 470 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 529

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SH    ++ E L+++M +I   G++           D EKE  + +HSE+LA+ F  +
Sbjct: 530 DESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFL 589

Query: 726 SLP 728
           SLP
Sbjct: 590 SLP 592



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 40/396 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA    +    D+F    L+  YA  GD+ +   + +++P  ++ S N L  GY KN
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 197 A-------LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTML 225
                   LFD                        ++  FFL +    + P+ +   ++ 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  +  G+Q+HA  ++        V ++L  MY++CG +++ E+V   L   +++
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           S   II G  Q+GD E  L   C+MR  G+  +  TF  A++SC+ L     G   H QV
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEE 404
           +K G+     V T +V MYS  G + ++++     G   S +   +A I+ +  +   ++
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF--FGYCGSDTFLLSAMISAYGFHGHGQK 358

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           AIE F QM+   A   + T+ ++L ACS   L      C ++ ++      + +V   + 
Sbjct: 359 AIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTY--GMQPSVKHYTC 416

Query: 462 LIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           +++   + G  ++AE  + S     D V W +++ A
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 23/383 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +LF + P+R  +S  +++F GY+   + G +R  +    D  P+  +    +    +
Sbjct: 94  AARELFERIPRRNVMSW-NILFGGYIKNGDLGGARKLF----DEMPERNVATWNAMVAGL 148

Query: 107 TCY-----SLESLLD--------KQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           T       SL   LD         +F +  V   C+    +  GR+ HA + ++ +  D 
Sbjct: 149 TNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM 208

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
            V +SL +MY +CG ++   AV++ +P L I SCN ++AG  +N   + A  +F  +  +
Sbjct: 209 CVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSV 268

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T+ + ++ C  L+A+ +G+Q+H Q MK        V   L+ MY +CG + D+
Sbjct: 269 GVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS 328

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--A 330
           E VF G    +    +A+I+ +  HG  +K + L   M   G +P++ TF   L +C  +
Sbjct: 329 ERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHS 388

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L+   M   F       GM       T +VD+    G + EA+  +  M  +   V W 
Sbjct: 389 GLKEEGMD-CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWK 447

Query: 391 AQIAGFFRNQKTEEAIEAFSQMV 413
             ++   + QK  +  E  ++ V
Sbjct: 448 TLLSA-CKTQKNFDMAERIAKRV 469



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           AA D FT + ++ A + L  L    ++  RI +     NV   + L   Y K G    A 
Sbjct: 72  AATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGAR 127

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F ++   +V +WN+M+   +  G   +++  F  M  EG+ P      +V   C+   
Sbjct: 128 KLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 187

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V  G++V   +V+  G+  +    S +  +  R G L+     +  LP
Sbjct: 188 DVVTGRQVHAYVVRS-GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++ +DAA     +S + +AC  L  L    Q+H+    S   ++    + L+ AY  
Sbjct: 35  FRGVLWSDAA---RLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYAD 88

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G    A  +F ++   +V+SWN +   Y +NG    A  LF++M    +    +T+ A+
Sbjct: 89  LGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----ATWNAM 144

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++  ++ G  ++    F  M +E G+ P+E
Sbjct: 145 VAGLTNLGFDEESLGFFLDMRRE-GMHPDE 173



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  +S CS    L  G++ H  + K  V     V   LV+MY++CG +     V      
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 337

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D    + +++ Y  +    +A   F ++     +P+  T+  +L  C      +EG   
Sbjct: 338 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 397

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  +Q   K      ++ +  + G +++AE++   + +  + + W  +++  K 
Sbjct: 398 FELMTKTYGMQPSVKH--YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +++   R+   + E  +DP++    V L++
Sbjct: 456 QKNFDMAERIAKRVIE--LDPHDSASYVLLSN 485


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 277/483 (57%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L   YIK G +  A  +F+ + +RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 111 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 170

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+        CA LR+   G   HA V++ G+     VG+++  MY   G + E +  
Sbjct: 171 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 230

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ M  S S VS N  IAG  +N  +E A+E F  M     A D  T+ S + +CS L +
Sbjct: 231 LR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAA 289

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH +++K+  +  V V + L+  Y++CG   D+ERVF     +D    ++MI A
Sbjct: 290 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 349

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KAI LF++M+  G  P++ TFLA+L ACSHSGL ++G   FE M K YG+ P
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 409

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P+ P   IW+ L +AC+   +  MAE I+K++
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 469

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  E RK M+   + KEPG SW+E+   I++F + 
Sbjct: 470 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 529

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SH    ++ E L+++M +I   G++           D EKE  + +HSE+LA+ F  +
Sbjct: 530 DESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFL 589

Query: 726 SLP 728
           SLP
Sbjct: 590 SLP 592



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 40/396 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA    +    D+F    L+  YA  GD+ +   + +++P  ++ S N L  GY KN
Sbjct: 61  RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 120

Query: 197 A-------LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTML 225
                   LFD                        ++  FFL +    + P+ +   ++ 
Sbjct: 121 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 180

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  +  G+Q+HA  ++        V ++L  MY++CG +++ E+V   L   +++
Sbjct: 181 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 240

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           S   II G  Q+GD E  L   C+MR  G+  +  TF  A++SC+ L     G   H QV
Sbjct: 241 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 300

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEE 404
           +K G+     V T +V MYS  G + ++++     G   S +   +A I+ +  +   ++
Sbjct: 301 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF--FGYCGSDTFLLSAMISAYGFHGHGQK 358

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           AIE F QM+   A   + T+ ++L ACS   L      C ++ ++      + +V   + 
Sbjct: 359 AIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTY--GMQPSVKHYTC 416

Query: 462 LIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           +++   + G  ++AE  + S     D V W +++ A
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 23/383 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +LF + P+R  +S  +++F GY+   + G +R  +    D  P+  +    +    +
Sbjct: 94  AARELFERIPRRNVMSW-NILFGGYIKNGDLGGARKLF----DEMPERNVATWNAMVAGL 148

Query: 107 TCY-----SLESLLD--------KQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           T       SL   LD         +F +  V   C+    +  GR+ HA + ++ +  D 
Sbjct: 149 TNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM 208

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
            V +SL +MY +CG ++   AV++ +P L I SCN ++AG  +N   + A  +F  +  +
Sbjct: 209 CVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSV 268

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T+ + ++ C  L+A+ +G+Q+H Q MK        V   L+ MY +CG + D+
Sbjct: 269 GVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS 328

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--A 330
           E VF G    +    +A+I+ +  HG  +K + L   M   G +P++ TF   L +C  +
Sbjct: 329 ERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHS 388

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L+   M   F       GM       T +VD+    G + EA+  +  M  +   V W 
Sbjct: 389 GLKEEGMD-CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWK 447

Query: 391 AQIAGFFRNQKTEEAIEAFSQMV 413
             ++   + QK  +  E  ++ V
Sbjct: 448 TLLSA-CKTQKNFDMAERIAKRV 469



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           AA D FT + ++ A + L  L    ++  RI +     NV   + L   Y K G    A 
Sbjct: 72  AATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGAR 127

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F ++   +V +WN+M+   +  G   +++  F  M  EG+ P      +V   C+   
Sbjct: 128 KLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 187

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V  G++V   +V+  G+  +    S +  +  R G L+     +  LP
Sbjct: 188 DVVTGRQVHAYVVRS-GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 235



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++ +DAA     +S + +AC  L  L    Q+H+    S   ++    + L+ AY  
Sbjct: 35  FRGVLWSDAA---RLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYAD 88

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G    A  +F ++   +V+SWN +   Y +NG    A  LF++M    +    +T+ A+
Sbjct: 89  LGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----ATWNAM 144

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++  ++ G  ++    F  M +E G+ P+E
Sbjct: 145 VAGLTNLGFDEESLGFFLDMRRE-GMHPDE 173



 Score = 39.3 bits (90), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  +S CS    L  G++ H  + K  V     V   LV+MY++CG +     V      
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 337

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D    + +++ Y  +    +A   F ++     +P+  T+  +L  C      +EG   
Sbjct: 338 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 397

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  +Q   K      ++ +  + G +++AE++   + +  + + W  +++  K 
Sbjct: 398 FELMTKTYGMQPSVKH--YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 455

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +++   R+   + E  +DP++    V L++
Sbjct: 456 QKNFDMAERIAKRVIE--LDPHDSASYVLLSN 485


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 194/629 (30%), Positives = 322/629 (51%), Gaps = 20/629 (3%)

Query: 132  CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
            C   G   H  + K        V  +L++ YAK   I + V V  +MP+ D  S N +++
Sbjct: 425  CARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVIS 484

Query: 192  GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            G   N L  +A   F+++     + +  T  ++L  C        G+ +H  ++K   + 
Sbjct: 485  GCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIG 544

Query: 252  KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
            +T+++NALL MY  C        +F  + Q+NV+SWTA+I  + + G ++K   L+  M 
Sbjct: 545  ETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMV 604

Query: 312  EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             DGI P+ +  T  L   A   +   G   H   I+ GM     V  A+++MY     + 
Sbjct: 605  LDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNME 664

Query: 372  EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            EA+     +  +   +SWN  I G+ RN    E+   FS M+      +  T + IL A 
Sbjct: 665  EARLVFDHV-TNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFKP-NTVTMTCILPAV 722

Query: 432  SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
            + + SL    +IH+  ++  F  + +  ++L++ Y KCG+   A  +F +LT  +++SW 
Sbjct: 723  ASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWT 782

Query: 492  SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
             MI  Y  +G  + A+ LFE+M   G+ P  ++F A+L AC HSGL  +G K F +M KE
Sbjct: 783  IMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKE 842

Query: 552  YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
            Y I P+  HY+C+VDLL   G L+ A  FI ++PI+P + IW  L   CR H D+K+AE 
Sbjct: 843  YKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEK 902

Query: 612  ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            ++ ++ +L+P++   YV L+N+YAEA      ++ +  +  + + +  GCSWIEV  K++
Sbjct: 903  VADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVH 962

Query: 672  RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLYHSERLAV 720
             F + N++H E  ++ E L  + +++ + GH   +K           ++ +  HS +LAV
Sbjct: 963  VFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAV 1022

Query: 721  GFGLISLP-------AKNKFECSRTLEYA 742
             FG++ LP        KN   CS   E A
Sbjct: 1023 TFGVLHLPEGRPIRVTKNSKVCSHCHEAA 1051



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 243/531 (45%), Gaps = 14/531 (2%)

Query: 123 VLSYCSREECLELGRRYHALI-TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP-- 179
           V+  C  E  LE  RR HAL+   T       +   LV  Y KCGD+     V  +MP  
Sbjct: 100 VVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+     L++ YAK   F +  S F ++    V P+ +  S +L    SL +I EG+ 
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H    KL      AV+NAL+ +Y +CG MEDA  VF+ +  R+ ISW + I+G+  +G 
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM--------- 350
           +++ + L   M  +G + +  T    L +CA L    +G + H   +K G+         
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
            + + +G+ +V MY   G++  A++    M    +   WN  + G+ +  + EE++  F 
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           QM       DE   S +LK  + L         H  +VK  F +   V ++LI  Y K  
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             ++A  VF ++   D +SWNS+I   + NG   +AI LF +M ++G    ++T L+VL 
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           AC+ S     G+ V    VK  G++ E +  + ++D+               N+  K   
Sbjct: 520 ACARSHYWFVGRVVHGYSVKT-GLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVV 578

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILE-LDPDDAAVYVTLSNMYAEAGLQ 640
                + +  R     K+A  + + +L+ + PD  AV   L     +  L+
Sbjct: 579 SWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLK 629



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 196/422 (46%), Gaps = 14/422 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   ++ VL  C+R     +GR  H    KT + G+  +  +L++MY+ C D  S   +
Sbjct: 509 LDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQI 568

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
            + M   ++ S   ++  Y +  LFD+       + LDGI  +P+ +  +++L       
Sbjct: 569 FRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGI--KPDVFAVTSVLHGFAGDE 626

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           ++ +GK +H   ++        V+NAL+ MY+ C  ME+A  VF+ +  +++ISW  +I 
Sbjct: 627 SLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIG 686

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ ++    +   L   M      PN  T T  L + AS+ +   G   HA  ++RG   
Sbjct: 687 GYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLE 745

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             +   A+VDMY   G +  A+     + K  + +SW   IAG+  +   ++A+  F QM
Sbjct: 746 DSYTSNALVDMYVKCGALLVARVLFDRLTKK-NLISWTIMIAGYGMHGCGKDAVALFEQM 804

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGS 471
             +    D  ++S+IL AC      A   +  + + K  K E  +   + +++  +  G+
Sbjct: 805 RGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGN 864

Query: 472 WEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV--VEGIRPTNSTFLAV 528
            ++A E + S     D   W S++       R  + + L EK+   V  + P N+ +  +
Sbjct: 865 LKEAFEFIESMPIEPDSSIWVSLL----HGCRIHRDVKLAEKVADRVFKLEPENTGYYVL 920

Query: 529 LS 530
           L+
Sbjct: 921 LA 922



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 191/412 (46%), Gaps = 26/412 (6%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT-MKLQYLSKTAVSNALLTMYIK 265
           L+L G D      +Y  ++ +CG   +++  ++ HA        +  + +   L+  Y+K
Sbjct: 83  LRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLK 142

Query: 266 CGMMEDAESVFEGLVQR--NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           CG +  A  VF+ +  R  +V  WT++++ + + GD+++ + L   M+  G+ P+ +  +
Sbjct: 143 CGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVS 202

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             L   ASL +   G + H  + K G+     V  A++ +YS  G + +A +    M  +
Sbjct: 203 CVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM-HA 261

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
             ++SWN+ I+G+F N   + A++ FS+M          T  S+L AC+ L      + +
Sbjct: 262 RDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVV 321

Query: 444 HSRIVKSKFESNVH---------VGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSM 493
           H   +KS    ++          +GS L+  Y KCG    A RVF  + +  +V  WN +
Sbjct: 322 HGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLI 381

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS-----ACSHSGLVQDGQKVFESM 548
           +  Y++     ++++LFE+M   GI P       +L      +C+  GLV  G  V    
Sbjct: 382 MGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV---- 437

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
             + G   + A  + ++    ++  ++ A++    +P + T   W  + + C
Sbjct: 438 --KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTIS-WNSVISGC 486



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 16/224 (7%)

Query: 78  GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGR 137
           G SRN ++  + S     +     NTV +TC              +L   +    LE GR
Sbjct: 687 GYSRNNFANESFSLFSDMLLQFKPNTVTMTC--------------ILPAVASISSLERGR 732

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
             HA   +     D + + +LV+MY KCG +     +  ++   ++ S   ++AGY  + 
Sbjct: 733 EIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 792

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYLSKTAVS 256
               A + F ++ G  V+P+  ++S +L  C       EG K  +A   + +   K    
Sbjct: 793 CGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHY 852

Query: 257 NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
             ++ +    G +++A    E + ++ +   W ++++G + H D
Sbjct: 853 TCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRD 896


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 183/522 (35%), Positives = 295/522 (56%), Gaps = 16/522 (3%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y  +L  C    A+ EG+++HA  +K +YL  T +   LL  Y KC  +EDA  V + 
Sbjct: 52  HCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 111

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHM 337
           + ++NV+SWTA+I+ + Q G   + L +   +MR DG  PNE+TF   L SC       +
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDG-KPNEFTFATVLTSCIRASGLAL 170

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H  ++K       FVG++++DMY+  G+I EA+ ++ E       VS  A IAG+ 
Sbjct: 171 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAR-EIFECLPERDVVSCTAIIAGYA 229

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +    EEA+E F ++       +  TY+S+L A S L  L   +Q H  +++ +      
Sbjct: 230 QLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 289

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + +SLI+ Y+KCG+   A+R+F  +     +SWN+M+  YS++G  R+ + LF  M  E 
Sbjct: 290 LQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 349

Query: 518 -IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLE 575
            ++P   T LAVLS CSH  +   G  +++ MV  EYGI P+  HY C+VD+LGRAG+++
Sbjct: 350 RVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRID 409

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A  FI  +P KPTA +   L  ACR H  + + E++  +++E++P++A  YV LSN+YA
Sbjct: 410 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYA 469

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
            AG   D    R +M  K ++KEPG SWI+    ++ F + +++H    +V  K+K++  
Sbjct: 470 SAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 529

Query: 696 QIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           +++  G+            + +KE  +L HSE+LA+ FGLI+
Sbjct: 530 KMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLIT 571



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 95/182 (52%), Gaps = 7/182 (3%)

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           EA  +MV          Y ++L AC    +L   +++H+ ++K+++    ++ + L+  Y
Sbjct: 37  EALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFY 96

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KC   EDA +V  ++   +VVSW +MI  YSQ G + +A+ +F +M+    +P   TF 
Sbjct: 97  GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFA 156

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIALIFISN 583
            VL++C  +  +  G+++   +VK       ++H    S ++D+  +AG++E A      
Sbjct: 157 TVLTSCIRASGLALGKQIHGLIVK----WNYDSHIFVGSSLLDMYAKAGQIEEAREIFEC 212

Query: 584 LP 585
           LP
Sbjct: 213 LP 214


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 178/529 (33%), Positives = 291/529 (55%), Gaps = 13/529 (2%)

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           ++L  C +   +  G+ +H   +K     KT   N LL MY KCG+++ A  VF+ +  R
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
            V++WT++I  + + G  ++ +RL   M  +G+ P+ +T T  L +CA   +   G   H
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
             + +  M    FV  A++DMY+  G + +A     EM      +SWN  I G+ +N   
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEM-PVKDIISWNTMIGGYSKNSLP 181

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
            EA+  F  MV  +   D  T + IL AC+ L SL   +++H  I+++ F S+  V ++L
Sbjct: 182 NEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           ++ Y KCG    A  +F  +   D+++W  MI  Y  +G    AI  F +M   GI P  
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            +F+++L ACSHSGL+ +G + F  M  E  + P+  HY+C+VDLL R+GKL +A  FI 
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360

Query: 583 NLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
           ++PI+P A IW  L + CR H D+K+AE +++ + EL+P++   YV L+N YAEA    +
Sbjct: 361 SMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEE 420

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            ++ R+ +  + + K PGCSWIEV +K++ F + N SH +  K+   LK+L  ++++ G+
Sbjct: 421 VKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGY 480

Query: 703 TDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                         +KE  +  HSE+LA+ FG+++LP       S+ L 
Sbjct: 481 FPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLR 529



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 153/313 (48%), Gaps = 2/313 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+    + LGR  H    K  V        +L++MYAKCG +   + V   M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + +   L+A YA+  L D+A   F ++D   V P+ +T +T+L  C    +++ GK 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H    +    S   V NAL+ MY KCG MEDA SVF  +  +++ISW  +I G+ ++  
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L L   M  + + P+  T    L +CASL +   G   H  +++ G      V  A
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY   G +    + L +M  +   ++W   IAG+  +     AI  F++M +     
Sbjct: 240 LVDMYVKCG-VPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEP 298

Query: 420 DEFTYSSILKACS 432
           DE ++ SIL ACS
Sbjct: 299 DEVSFISILYACS 311



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 4/192 (2%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           LE   D   +  +L  C+    L+ G+  H  I +     DQ V  +LV+MY KCG    
Sbjct: 193 LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVL 252

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              +   +P  D+ +   ++AGY  +   + A + F ++    ++P+  ++ ++L  C  
Sbjct: 253 ARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSH 312

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISW 287
              +DEG +     M+ +   K  + +   ++ +  + G +  A    + + ++ +   W
Sbjct: 313 SGLLDEGWRFF-NVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIW 371

Query: 288 TAIINGFKQHGD 299
            A+++G + H D
Sbjct: 372 GALLSGCRIHHD 383


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 190/565 (33%), Positives = 310/565 (54%), Gaps = 1/565 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+       G + H L+  +    D  V  +LV MY+KCG++     +   MP  D
Sbjct: 219 ILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L+AGY +N   D+A   F  +    V+P+  T+++ L       ++   K++H+
Sbjct: 279 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 338

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +      + +AL+ +Y K G +E A  +F+  +  +V   TA+I+G+  HG    
Sbjct: 339 YIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNID 398

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +     + ++G+  N  T    L +CA++     G   H  ++K+ +     VG+AI D
Sbjct: 399 AINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITD 458

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A +  + M     SV WN+ I+ F +N K E AI+ F QM  + A  D  
Sbjct: 459 MYAKCGRLDLAYEFFRRM-SDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSV 517

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + SS L A + LP+L   +++H  ++++ F S+  V S+LI+ Y+KCG+   A  VF+ +
Sbjct: 518 SLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLM 577

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + VSWNS+I AY  +G  R+ + L+ +M+  GI P + TFL ++SAC H+GLV +G 
Sbjct: 578 DGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGI 637

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M +EYGI     HY+CMVDL GRAG++  A   I ++P  P A +W  L  ACR 
Sbjct: 638 HYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRL 697

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++A+  S+ +LELDP ++  YV LSN++A+AG  A   + R LMK K + K PG S
Sbjct: 698 HGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYS 757

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVY 687
           WI+V    + F + + +H E  ++Y
Sbjct: 758 WIDVNGGTHMFSAADGNHPESVEIY 782



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 226/482 (46%), Gaps = 11/482 (2%)

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS-LVNMYA 163
           P T  SL + L+  F       CS    ++  R+ H  +    + GD    +S ++ +Y 
Sbjct: 4   PETLDSLTTQLESLF-----RACSDASMVQQARQVHTQVIVGGM-GDVCAPSSRVLGLYV 57

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
            CG  +    +  ++        N ++ G      FD A  F+ K+ G +V P+ YT+  
Sbjct: 58  LCGRFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPY 117

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ++  CG L+ +     +H     L +       +AL+ +Y   G + DA  VF+ L  R+
Sbjct: 118 VIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRD 177

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            I W  ++ G+ + GD++  +   C MR      N  T+T  L+ CA+  N   G   H 
Sbjct: 178 TILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHG 237

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            VI  G      V   +V MYS  G +  A+K    M ++  +V+WN  IAG+ +N  T+
Sbjct: 238 LVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQT-DTVTWNGLIAGYVQNGFTD 296

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA   F+ M+      D  T++S L +     SL  C+++HS IV+ +   +V++ S+LI
Sbjct: 297 EAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALI 356

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y K G  E A ++F Q    DV    +MI  Y  +G    AI  F  ++ EG+   + 
Sbjct: 357 DVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSL 416

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFIS 582
           T  +VL AC+    ++ G+++   ++K+   L    +  S + D+  + G+L++A  F  
Sbjct: 417 TMASVLPACAAVAALKPGKELHCHILKKR--LENIVNVGSAITDMYAKCGRLDLAYEFFR 474

Query: 583 NL 584
            +
Sbjct: 475 RM 476


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 188/603 (31%), Positives = 323/603 (53%), Gaps = 12/603 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           LG   HA         + FV ++LV++Y K   +     V  +MP  D    N ++ G  
Sbjct: 121 LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLV 180

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N  +D +   F  +    V+ +  T +T+L     +  +  G  +    +KL +     
Sbjct: 181 RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY 240

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V   L++++ KC  ++ A  +F  + + +++S+ A+I+GF  +G+ E  ++    +   G
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
              +  T    +   +   + H+        +K G  L   V TA+  +YS L EI +  
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEI-DLA 359

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +QL +     +  +WNA I+G+ ++  TE AI  F +M+  +   +  T +SIL AC+ L
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L+  + +H  I     E N++V ++LI+ Y KCG+  +A ++F   +  + V+WN+MI
Sbjct: 420 GALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMI 479

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y  +G   +A+ LF +M+  G +P++ TFL+VL ACSH+GLV++G ++F +MV +Y I
Sbjct: 480 FGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRI 539

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+CMVD+LGRAG+LE AL FI  +P++P   +W  L  AC  H D  +A   S+
Sbjct: 540 EPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASE 599

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ ELDP +   YV LSN+Y+       A   R+ +K + +SK PGC+ IEV    + F 
Sbjct: 600 RLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFV 659

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIG---------HTDNEKEDRVLY--HSERLAVGFG 723
             ++SHS+   +Y KL++L  ++ ++G         H   E+E  +++  HSE+LA+ FG
Sbjct: 660 CGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFG 719

Query: 724 LIS 726
           LI+
Sbjct: 720 LIT 722



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 142/315 (45%), Gaps = 4/315 (1%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +T+LA+           + HAQ ++  Y    A    L       G    A ++F  + +
Sbjct: 9   NTLLALISKACTFPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPK 68

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            ++  +  +I GF    D         L++   + P+ +T+  A+++     + ++G   
Sbjct: 69  PDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASP---DDNLGMCL 125

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA  +  G     FV +A+VD+Y     +  A+K   +M     +V WN  I G  RN  
Sbjct: 126 HAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKM-PDRDTVLWNTMITGLVRNCC 184

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            +++++ F  MV      D  T +++L A + +  +     I    +K  F  + +V + 
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI  ++KC   + A  +F  +   D+VS+N++I  +S NG    A+  F +++V G R +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304

Query: 522 NSTFLAVLSACSHSG 536
           +ST + ++   S  G
Sbjct: 305 SSTMVGLIPVSSPFG 319



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 26/290 (8%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  +LS C++   L  G+  H LI    +  + +V+ +L++MYAKCG+I     +     
Sbjct: 409 ITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS 468

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  + N ++ GY  +   D+A   F ++  +  QP+  T+ ++L  C     + EG +
Sbjct: 469 EKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDE 528

Query: 240 L-HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA-ESVFEGLVQRNVISWTAIINGFKQH 297
           + HA   K +          ++ +  + G +E A E + +  V+     W  ++     H
Sbjct: 529 IFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL-RNSHMGYMFHAQVIKRGMA----- 351
            D    L  V   R   +DP    + V L++  S+ RN          V KR ++     
Sbjct: 589 KDTN--LARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGC 646

Query: 352 -------------LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
                         GD   +    +Y+ L E+     +++EMG  + +V+
Sbjct: 647 TLIEVNGTPHVFVCGDRSHSQTTSIYAKLEEL---TGKMREMGYQSETVT 693


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 176/538 (32%), Positives = 309/538 (57%), Gaps = 20/538 (3%)

Query: 210 DGIDVQPNHYT--------YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           D  +V P  Y+           +L +C    A+ E K  H + +++       + N L+ 
Sbjct: 45  DQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN 104

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
            Y KCG +E A  VF+G+++R+++SW  +I  + ++    + L +   MR +G   +E+T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            +  L++C    ++      H   +K  + L  +VGTA++D+Y+  G I +A +  + M 
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM- 223

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           +  SSV+W++ +AG+ +N+  EEA+  + +  R     ++FT SS++ ACS L +L   +
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H+ I KS F SNV V SS ++ Y KCGS  ++  +FS++   ++  WN++I  ++++ 
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           R ++ +ILFEKM  +G+ P   TF ++LS C H+GLV++G++ F+ M   YG+ P   HY
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           SCMVD+LGRAG L  A   I ++P  PTA IW  L A+CR + +L++AE  ++++ EL+P
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
           ++A  +V LSN+YA      +  + RKL++  ++ K  G SWI++ +K++ F      H 
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
            + ++   L  L+ +    G+  +           +KE+ ++ HSE+LA+ FGL+ LP
Sbjct: 524 RIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLP 581



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 164/316 (51%), Gaps = 1/316 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           ++  V E+L  C+R   +   +  H  I +  + GD  +   L+N Y+KCG ++    V 
Sbjct: 60  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M    + S N ++  Y +N +  +A   FL++     + + +T S++L+ CG      
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           E K+LH  ++K        V  ALL +Y KCGM++DA  VFE +  ++ ++W++++ G+ 
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+ +YE+ L L    +   ++ N++T +  + +C++L     G   HA + K G     F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V ++ VDMY+  G + E+     E+ +    + WN  I+GF ++ + +E +  F +M ++
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQD 358

Query: 416 DAACDEFTYSSILKAC 431
               +E T+SS+L  C
Sbjct: 359 GMHPNEVTFSSLLSVC 374



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 4/163 (2%)

Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           SL   QF +  V+  CS    L  G++ HA+I K+    + FV +S V+MYAKCG ++  
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             +  ++   ++   N +++G+AK+A   +    F K+    + PN  T+S++L++CG  
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377

Query: 232 SAIDEGKQLHAQTMKLQY-LSKTAVS-NALLTMYIKCGMMEDA 272
             ++EG++   + M+  Y LS   V  + ++ +  + G++ +A
Sbjct: 378 GLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 277/483 (57%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L   YIK G +  A  +F+ + +RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 173 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 232

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+        CA LR+   G   HA V++ G+     VG+++  MY   G + E +  
Sbjct: 233 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 292

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ M  S S VS N  IAG  +N  +E A+E F  M     A D  T+ S + +CS L +
Sbjct: 293 LR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAA 351

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH +++K+  +  V V + L+  Y++CG   D+ERVF     +D    ++MI A
Sbjct: 352 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 411

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KAI LF++M+  G  P++ TFLA+L ACSHSGL ++G   FE M K YG+ P
Sbjct: 412 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 471

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P+ P   IW+ L +AC+   +  MAE I+K++
Sbjct: 472 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 531

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  E RK M+   + KEPG SW+E+   I++F + 
Sbjct: 532 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 591

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SH    ++ E L+++M +I   G++           D EKE  + +HSE+LA+ F  +
Sbjct: 592 DESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFL 651

Query: 726 SLP 728
           SLP
Sbjct: 652 SLP 654



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 40/396 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA    +    D+F    L+  YA  GD+ +   + +++P  ++ S N L  GY KN
Sbjct: 123 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 182

Query: 197 A-------LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTML 225
                   LFD                        ++  FFL +    + P+ +   ++ 
Sbjct: 183 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 242

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  +  G+Q+HA  ++        V ++L  MY++CG +++ E+V   L   +++
Sbjct: 243 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 302

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           S   II G  Q+GD E  L   C+MR  G+  +  TF  A++SC+ L     G   H QV
Sbjct: 303 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 362

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEE 404
           +K G+     V T +V MYS  G + ++++     G   S +   +A I+ +  +   ++
Sbjct: 363 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF--FGYCGSDTFLLSAMISAYGFHGHGQK 420

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           AIE F QM+   A   + T+ ++L ACS   L      C ++ ++      + +V   + 
Sbjct: 421 AIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTY--GMQPSVKHYTC 478

Query: 462 LIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           +++   + G  ++AE  + S     D V W +++ A
Sbjct: 479 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 514



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 23/383 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +LF + P+R  +S  +++F GY+   + G +R  +    D  P+  +    +    +
Sbjct: 156 AARELFERIPRRNVMSW-NILFGGYIKNGDLGGARKLF----DEMPERNVATWNAMVAGL 210

Query: 107 TCY-----SLESLLD--------KQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           T       SL   LD         +F +  V   C+    +  GR+ HA + ++ +  D 
Sbjct: 211 TNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM 270

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
            V +SL +MY +CG ++   AV++ +P L I SCN ++AG  +N   + A  +F  +  +
Sbjct: 271 CVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSV 330

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T+ + ++ C  L+A+ +G+Q+H Q MK        V   L+ MY +CG + D+
Sbjct: 331 GVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS 390

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--A 330
           E VF G    +    +A+I+ +  HG  +K + L   M   G +P++ TF   L +C  +
Sbjct: 391 ERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHS 450

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L+   M   F       GM       T +VD+    G + EA+  +  M  +   V W 
Sbjct: 451 GLKEEGMD-CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWK 509

Query: 391 AQIAGFFRNQKTEEAIEAFSQMV 413
             ++   + QK  +  E  ++ V
Sbjct: 510 TLLSA-CKTQKNFDMAERIAKRV 531



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           AA D FT + ++ A + L  L    ++  RI +     NV   + L   Y K G    A 
Sbjct: 134 AATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGAR 189

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F ++   +V +WN+M+   +  G   +++  F  M  EG+ P      +V   C+   
Sbjct: 190 KLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 249

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V  G++V   +V+  G+  +    S +  +  R G L+     +  LP
Sbjct: 250 DVVTGRQVHAYVVRS-GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 297



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++ +DAA     +S + +AC  L  L    Q+H+    S   ++    + L+ AY  
Sbjct: 97  FRGVLWSDAA---RLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYAD 150

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G    A  +F ++   +V+SWN +   Y +NG    A  LF++M    +    +T+ A+
Sbjct: 151 LGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----ATWNAM 206

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++  ++ G  ++    F  M +E G+ P+E
Sbjct: 207 VAGLTNLGFDEESLGFFLDMRRE-GMHPDE 235



 Score = 39.7 bits (91), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  +S CS    L  G++ H  + K  V     V   LV+MY++CG +     V      
Sbjct: 340 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 399

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D    + +++ Y  +    +A   F ++     +P+  T+  +L  C      +EG   
Sbjct: 400 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 459

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  +Q   K      ++ +  + G +++AE++   + +  + + W  +++  K 
Sbjct: 460 FELMTKTYGMQPSVKH--YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 517

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +++   R+   + E  +DP++    V L++
Sbjct: 518 QKNFDMAERIAKRVIE--LDPHDSASYVLLSN 547


>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 704

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 277/483 (57%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L   YIK G +  A  +F+ + +RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 177 NILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMH 236

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+        CA LR+   G   HA V++ G+     VG+++  MY   G + E +  
Sbjct: 237 PDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAV 296

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ M  S S VS N  IAG  +N  +E A+E F  M     A D  T+ S + +CS L +
Sbjct: 297 LR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAA 355

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH +++K+  +  V V + L+  Y++CG   D+ERVF     +D    ++MI A
Sbjct: 356 LAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISA 415

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KAI LF++M+  G  P++ TFLA+L ACSHSGL ++G   FE M K YG+ P
Sbjct: 416 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 475

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P+ P   IW+ L +AC+   +  MAE I+K++
Sbjct: 476 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRV 535

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  E RK M+   + KEPG SW+E+   I++F + 
Sbjct: 536 IELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTG 595

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SH    ++ E L+++M +I   G++           D EKE  + +HSE+LA+ F  +
Sbjct: 596 DESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFL 655

Query: 726 SLP 728
           SLP
Sbjct: 656 SLP 658



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 179/396 (45%), Gaps = 40/396 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA    +    D+F    L+  YA  GD+ +   + +++P  ++ S N L  GY KN
Sbjct: 127 RQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWNILFGGYIKN 186

Query: 197 A-------LFD------------------------QAFSFFLKLDGIDVQPNHYTYSTML 225
                   LFD                        ++  FFL +    + P+ +   ++ 
Sbjct: 187 GDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVF 246

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             C  L  +  G+Q+HA  ++        V ++L  MY++CG +++ E+V   L   +++
Sbjct: 247 RCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIV 306

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           S   II G  Q+GD E  L   C+MR  G+  +  TF  A++SC+ L     G   H QV
Sbjct: 307 SCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQV 366

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEE 404
           +K G+     V T +V MYS  G + ++++     G   S +   +A I+ +  +   ++
Sbjct: 367 MKAGVDKVVPVMTCLVHMYSRCGCLGDSERVF--FGYCGSDTFLLSAMISAYGFHGHGQK 424

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           AIE F QM+   A   + T+ ++L ACS   L      C ++ ++      + +V   + 
Sbjct: 425 AIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTY--GMQPSVKHYTC 482

Query: 462 LIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           +++   + G  ++AE  + S     D V W +++ A
Sbjct: 483 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 176/383 (45%), Gaps = 23/383 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +LF + P+R  +S  +++F GY+   + G +R  +    D  P+  +    +    +
Sbjct: 160 AARELFERIPRRNVMSW-NILFGGYIKNGDLGGARKLF----DEMPERNVATWNAMVAGL 214

Query: 107 TCYSL-------------ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           T                 E +   +F +  V   C+    +  GR+ HA + ++ +  D 
Sbjct: 215 TNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDM 274

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
            V +SL +MY +CG ++   AV++ +P L I SCN ++AG  +N   + A  +F  +  +
Sbjct: 275 CVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSV 334

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            V  +  T+ + ++ C  L+A+ +G+Q+H Q MK        V   L+ MY +CG + D+
Sbjct: 335 GVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS 394

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--A 330
           E VF G    +    +A+I+ +  HG  +K + L   M   G +P++ TF   L +C  +
Sbjct: 395 ERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHS 454

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L+   M   F       GM       T +VD+    G + EA+  +  M  +   V W 
Sbjct: 455 GLKEEGMD-CFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWK 513

Query: 391 AQIAGFFRNQKTEEAIEAFSQMV 413
             ++   + QK  +  E  ++ V
Sbjct: 514 TLLSA-CKTQKNFDMAERIAKRV 535



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
           AA D FT + ++ A + L  L    ++  RI +     NV   + L   Y K G    A 
Sbjct: 138 AATDRFTANHLMLAYADLGDLTAARELFERIPRR----NVMSWNILFGGYIKNGDLGGAR 193

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F ++   +V +WN+M+   +  G   +++  F  M  EG+ P      +V   C+   
Sbjct: 194 KLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLR 253

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            V  G++V   +V+  G+  +    S +  +  R G L+     +  LP
Sbjct: 254 DVVTGRQVHAYVVRS-GLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLP 301



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++ +DAA     +S + +AC  L  L    Q+H+    S   ++    + L+ AY  
Sbjct: 101 FRGVLWSDAA---RLFSHLFRACRALRPL---RQLHAFAATSGAATDRFTANHLMLAYAD 154

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
            G    A  +F ++   +V+SWN +   Y +NG    A  LF++M    +    +T+ A+
Sbjct: 155 LGDLTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNV----ATWNAM 210

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           ++  ++ G  ++    F  M +E G+ P+E
Sbjct: 211 VAGLTNLGFDEESLGFFLDMRRE-GMHPDE 239



 Score = 40.0 bits (92), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 41/212 (19%), Positives = 92/212 (43%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  +S CS    L  G++ H  + K  V     V   LV+MY++CG +     V      
Sbjct: 344 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 403

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D    + +++ Y  +    +A   F ++     +P+  T+  +L  C      +EG   
Sbjct: 404 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 463

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  +Q   K      ++ +  + G +++AE++   + +  + + W  +++  K 
Sbjct: 464 FELMTKTYGMQPSVKH--YTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKT 521

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             +++   R+   + E  +DP++    V L++
Sbjct: 522 QKNFDMAERIAKRVIE--LDPHDSASYVLLSN 551


>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 606

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 301/554 (54%), Gaps = 5/554 (0%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           G      +L+  Y   G  +    +  ++P  D+ +   ++ G+     + QA++ F ++
Sbjct: 41  GPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI-KCGM 268
              +VQPN +T S++L  C  + A+  G   H+   K        V NALL MY   C  
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGD-YEKPLRLVCLMREDGIDPNEYTFTVALA 327
           M+DA SVF  +  +  +SWT +I GF   GD Y   L    ++ ED + PN ++F++A  
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED-VGPNSFSFSIAAR 219

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +CAS+ +   G   HA V K G+     V  +I+DMY     + +AK+   E+ +  + +
Sbjct: 220 ACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEK-NLI 278

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +WN  IAG+ R+  + E++  F QM       + FT++SI  AC+ L  L+  +Q+H  I
Sbjct: 279 TWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGI 337

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V+  F+ NV + +SLI+ Y KCGS  D+ ++F  +   D+VSW +M+  Y  +G  ++A+
Sbjct: 338 VRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAV 397

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF++MV  GI+P    F+ VL  CSH+GLV  G K F SM+++Y I P++  Y C+VDL
Sbjct: 398 KLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDL 457

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
           LGRAG++E A   + N+P +P   +W  L  AC+ +    +    ++++L+  P+ A  Y
Sbjct: 458 LGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTY 517

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           + LS +YA  G   +  + RKLMK     KE G SWIE+ N++Y F    K    +  V+
Sbjct: 518 LLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVH 577

Query: 688 EKLKQLMQQIEDIG 701
           + +  L+  ++D G
Sbjct: 578 KVIDVLIWHMKDDG 591



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 210/488 (43%), Gaps = 62/488 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYS--TRNDSFPDGFIDDGCSNTVP 105
           AC LFN+ P+R  ++ + +I  G+ +      +   +S   R++  P+ F          
Sbjct: 62  ACNLFNEIPERDVVTWTAMIV-GFTSCNHYHQAWTMFSEMLRSEVQPNAFT--------- 111

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY-AK 164
                         +  VL  C   + L  G   H+L TK  +    +V  +L++MY A 
Sbjct: 112 --------------MSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAAS 157

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           C  +   ++V   +P     S   L+AG+            F ++   DV PN +++S  
Sbjct: 158 CATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIA 217

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
              C S+S+   GKQ+HA   K        V N++L MY +C  + DA+  F  L ++N+
Sbjct: 218 ARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           I+W  +I G+++  D  + L L   M  +G  PN +TFT   A+CA+L     G   H  
Sbjct: 278 ITWNTLIAGYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +++RG      +  +++DMY+  G I ++ K   +M      VSW   + G+  +   +E
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM-PGRDLVSWTTMMIGYGAHGYGKE 395

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ F +MV++    D   +  +L  CS           H+ +V    +  +    S++E
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCS-----------HAGLV----DKGLKYFRSMLE 440

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            YN                  D   +  ++    + GR  +A  L E M  E   P  S 
Sbjct: 441 DYN---------------INPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFE---PDESV 482

Query: 525 FLAVLSAC 532
           + A+L AC
Sbjct: 483 WGALLGAC 490



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 35/262 (13%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           + + C+    L  G++ H  I +     +  +  SL++MYAKCG I     +   MP  D
Sbjct: 317 ITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRD 376

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++ GY  +    +A   F ++    +QP+   +  +L  C     +D+G     
Sbjct: 377 LVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKG----- 431

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
               L+Y                  M+ED     +  + R       +++   + G  E+
Sbjct: 432 ----LKYFRS---------------MLEDYNINPDQEIYR------CVVDLLGRAGRVEE 466

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR--GMALGDFVGTAI 360
             +LV  M     +P+E  +   L +C + + S++G +   +V+ R   MA    + + I
Sbjct: 467 AFQLVENMP---FEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523

Query: 361 VDMYSGLGEIWEAKKQLKEMGK 382
                  GE  + +K +K M K
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNK 545


>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
          Length = 799

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 194/638 (30%), Positives = 324/638 (50%), Gaps = 66/638 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     +L  CS  E L LG + HAL  KT +  D    ++LV+MY KC  +   +   
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  +  S    +AG  +N  + +    F+++  + +  +  +Y++    C ++S ++
Sbjct: 208 YGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLHA  +K ++ S   V  A++ +Y K   + DA   F GL    V +  A++ G  
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGL- 326

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-------- 347
                         M    I  +  + +   ++CA  +    G   H   IK        
Sbjct: 327 -------------FMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYGK 373

Query: 348 -----------RGMALGD--------------------------------FVGTAIVDMY 364
                      +GM   D                                FV + +VDMY
Sbjct: 374 CKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMY 433

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
              G I EA+K    +G     VSWNA ++GF  N+++E A + FS+M+      D FT+
Sbjct: 434 CKCGIIDEAQKLHDRIG-GQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTF 492

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           +++L  C+ L ++   +QIH +I+K +   + ++ S+L++ Y KCG   D+  VF ++  
Sbjct: 493 ATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEK 552

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            D VSWN+MI  Y+ +G   +A+ +FE+M  E + P ++TF+AVL ACSH GL  DG + 
Sbjct: 553 RDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRY 612

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           F  M   Y + P+  H++CMVD+LGR+   + A+ FI+++P +  A IW+ L + C+   
Sbjct: 613 FHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQ 672

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
           D+++AE  +  +L LDPDD++VY+ LSN+YAE+G  AD    R+L+K   + KEPGCSWI
Sbjct: 673 DVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 732

Query: 665 EVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
           E  ++++ F   +K+H    ++YE L  L+ +++  G+
Sbjct: 733 EAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGY 770



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 217/474 (45%), Gaps = 67/474 (14%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  Y+  GDI + VA+   MP  D+ S N L++GY +  +F ++   F+++    V P
Sbjct: 88  TMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSP 147

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T++ +L  C +L  +  G Q+HA  +K          +AL+ MY KC  ++DA   F
Sbjct: 148 DRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFF 207

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            G+ +RN +SW + I G  Q+  Y + L L   M+  G+  ++ ++  A  SCA++   +
Sbjct: 208 YGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLN 267

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA  IK   +    VGTAIVD+Y+    + +A++    +       S NA + G 
Sbjct: 268 TGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS-NAMMVGL 326

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS------ 450
           F              M+R+    D  + S +  AC+        +Q+H   +KS      
Sbjct: 327 F--------------MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLYG 372

Query: 451 ----------------------------KFESNVH-----------------VGSSLIEA 465
                                         E N H                 V S++++ 
Sbjct: 373 KCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDM 432

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           Y KCG  ++A+++  ++    VVSWN+++  +S N  +  A   F +M+  G++P + TF
Sbjct: 433 YCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTF 492

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
             VL  C++   ++ G+++   ++K+  +L +E   S +VD+  + G +  +L+
Sbjct: 493 ATVLDTCANLATIELGKQIHGQIIKQE-MLDDEYISSTLVDMYAKCGDMPDSLL 545



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 207/475 (43%), Gaps = 75/475 (15%)

Query: 249 YLSKTAVSNALLTMYI-------------------------------KCGMMEDAESVFE 277
           ++    VSN LL MY                                  G +  A ++F+
Sbjct: 48  FVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFD 107

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G+   +V+SW A+++G+ Q G +++ + L   M   G+ P+  TF V L SC++L    +
Sbjct: 108 GMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSL 167

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  +K G+ +    G+A+VDMY     + +A      M +  + VSW + IAG  
Sbjct: 168 GVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER-NWVSWGSAIAGCV 226

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +N++    +E F +M R      + +Y+S  ++C+ +  L T  Q+H+  +K+KF S+  
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRV 286

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           VG+++++ Y K  S  DA R F  L    V + N+M+            + LF  M+   
Sbjct: 287 VGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM------------VGLF--MIRSS 332

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           IR    +   V SAC+ +     GQ+V    +K             ++DL G+   L  A
Sbjct: 333 IRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKS------------VLDLYGKCKALMEA 380

Query: 578 LIFISNLPIKPTAPIWRPLFAACR--CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            +    +  K +   W  + AA     H D  +  F   ++L     DA V  T+ +MY 
Sbjct: 381 YLIFQGMKQKDSVS-WNAIIAALEQNGHYDDTILHF--NEMLRF---DAFVASTVVDMYC 434

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           + G+    +E +KL     I  +   SW    N I   FS NK      K + ++
Sbjct: 435 KCGI---IDEAQKL--HDRIGGQQVVSW----NAILSGFSLNKESEAAQKFFSEM 480



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 33/186 (17%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R+V S F     V + L++ Y +C     A RVF  +   D VSWN+M+ AYS  G    
Sbjct: 42  RMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 506 AIILFE-------------------------------KMVVEGIRPTNSTFLAVLSACSH 534
           A+ LF+                               +M   G+ P  +TF  +L +CS 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  G +V    VK  G+  +    S +VD+ G+   L+ AL F   +P +     W 
Sbjct: 162 LEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVS-WG 219

Query: 595 PLFAAC 600
              A C
Sbjct: 220 SAIAGC 225


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 208/667 (31%), Positives = 330/667 (49%), Gaps = 90/667 (13%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLK 208
           D     +L+  Y+  G++K    +  + P    D    N ++ GY+       A   F  
Sbjct: 78  DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGK--QLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           +   + QP+ +T++++L+   +L   DE +  Q+H   +K       AV NALL++Y+KC
Sbjct: 138 MRWANFQPDDFTFASVLS-ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKC 196

Query: 267 GM---------MEDAESVFEGLVQRNV-------------------------------IS 286
                      M  A  +F+ + +RN                                I+
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W A+I+G+  HG +E  L L   MR  G+  +E T+T  +++CA      +G   HA ++
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316

Query: 347 KRGMALG-DF---VGTAIVDMYSGLGEIWEAKKQLKEM------------------GKSA 384
           K  +    DF   VG  ++ +Y   G++  A+K   EM                  G+  
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376

Query: 385 SS------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
            +            ++W   I+G  +N   E+A++ F+QM  +    +++ ++  + ACS
Sbjct: 377 EAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACS 436

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
           +L +L    Q+H++IV    +S + VG+++I  Y +CG  E A  +F  +   D VSWNS
Sbjct: 437 VLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNS 496

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI A  Q+G   KAI L+E+M+ EGI P   TFL VLSACSH+GLV++G + F SM++ Y
Sbjct: 497 MIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENY 556

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P E HY+ M+DL  RAGK   A   I ++P +  APIW  L A CR H ++ +    
Sbjct: 557 GIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++++ +L P     YV LSNMYA  G   D    RKLM+ + + KEP CSW EV NK++ 
Sbjct: 617 AEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHV 676

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVG 721
           F   +  H E+  +Y  L++L  +++ IG+  +            KE  +  HSE+LAV 
Sbjct: 677 FLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVA 736

Query: 722 FGLISLP 728
           FGL+ LP
Sbjct: 737 FGLMKLP 743



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 69/425 (16%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMN--------------IEEKGISRNGYSTRNDSFP 92
           SA +LF++ PKR     + LI  GY+                E+ GI+ N  +  +    
Sbjct: 210 SARKLFDEMPKRNEFIWTTLI-TGYVRNGDLTGAREILDTMTEQPGIAWN--AMISGYLH 266

Query: 93  DGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ 152
            G  +D  +    +    ++  +D+     V+S C+      LG++ HA I K  +  D+
Sbjct: 267 HGLFEDALTLFRKMRLLGVQ--VDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDR 324

Query: 153 ----FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF-- 206
                V  +L+ +Y K G +     +  +MP  DI + N LL+GY      ++A SFF  
Sbjct: 325 DFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQ 384

Query: 207 -------------------------------LKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                                          +KLDG   +PN Y ++  +  C  L A++
Sbjct: 385 MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDG--YEPNDYAFAGAITACSVLGALE 442

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+QLHAQ + L + S  +V NA++TMY +CG++E A ++F  +   + +SW ++I    
Sbjct: 443 NGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALG 502

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRG 349
           QHG   K + L   M ++GI P+  TF   L++C     SH G +      F++ +   G
Sbjct: 503 QHGHGVKAIELYEQMLKEGILPDRRTFLTVLSAC-----SHAGLVEEGNRYFNSMLENYG 557

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +A G+     ++D++   G+  +AK  +  M   A +  W A +AG   +   +  IEA 
Sbjct: 558 IAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAA 617

Query: 410 SQMVR 414
            ++ +
Sbjct: 618 EKLFK 622



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 14/111 (12%)

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRARKAIILF 510
           + +V   ++LI AY+  G+ + A  +F++  L   D V +N+MI  YS       AI LF
Sbjct: 76  QPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELF 135

Query: 511 EKMVVEGIRPTNSTFLAVLSACS------------HSGLVQDGQKVFESMV 549
             M     +P + TF +VLSA +            H  +V+ G ++F +++
Sbjct: 136 RAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVL 186


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 178/562 (31%), Positives = 304/562 (54%), Gaps = 8/562 (1%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           + H+L  +     D ++ + L+ +Y++CG +++   V ++M   D+     L++   +N 
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
              +A     ++    +QPN +T ++MLA C        G+Q+H   +K+        S 
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYAST 272

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           AL+  Y + G    A++VFE L  +NV+SW +++    + G  +  LR+   M  +G+ P
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQP 332

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           NE+ F++AL++C S+    +G   H   IKR +     V  A++ MY   G + E +  L
Sbjct: 333 NEFAFSIALSACGSV---CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVL 389

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            ++ ++   VSW A I+  F+N  +E+A+    QM       +++ +SS L +C+ L  L
Sbjct: 390 GKI-ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALL 448

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               Q+H   +K   +  V  G++LI  Y+KCG    A   F  +   DV+SWNS+I   
Sbjct: 449 HQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGL 508

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +Q+G A  A+  F +M     RP +STFL+VL  C+H+GLV++G+  F  M   YG+ P 
Sbjct: 509 AQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPT 568

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
            +HY+CM+D+LGR G+   AL  I N+P +P   IW+ L A+C+ H +L + +  + +++
Sbjct: 569 PSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLM 628

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL   D+A YV +SN+YA      DAE  R+ M    + K+ G SWIEV N++  F + +
Sbjct: 629 ELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGD 688

Query: 678 KSHSEMPKVYEKLKQLMQQIED 699
            SH +   +Y+ L +L+  ++D
Sbjct: 689 MSHPDSTSIYQMLAELLVVMQD 710



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 194/381 (50%), Gaps = 8/381 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +   + +  +MP  ++ +    ++G  +N   + A + F  +    V PN +  + 
Sbjct: 82  KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            LA C +  A+  G+Q+H+  ++  + +   + + L+ +Y +CG +  AE VF  +   +
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+ +T++++   ++G+  + + ++C M   G+ PNE+T T  LA C       +G   H 
Sbjct: 202 VVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHG 257

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            ++K   +   +  TA++D YS  G+   AK   + + +S + VSW + +    R+ + +
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENL-ESKNVVSWCSMMQLCIRDGRLD 316

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           +A+  FS+M+      +EF +S  L AC    S+    QIH   +K    +++ V ++L+
Sbjct: 317 DALRVFSEMISEGVQPNEFAFSIALSACG---SVCLGRQIHCSAIKRDLMTDIRVSNALL 373

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y + G   + E V  ++   D+VSW + I A  QNG + KA+ L  +M  EG  P + 
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433

Query: 524 TFLAVLSACSHSGLVQDGQKV 544
            F + LS+C+   L+  G+++
Sbjct: 434 AFSSGLSSCADLALLHQGRQL 454



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 172/323 (53%), Gaps = 12/323 (3%)

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
           +K G + DA  +F+ + ++NV++WT  I+G  ++G  E    +   M E G+ PN++   
Sbjct: 81  MKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACN 140

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
            ALA+CA+     +G   H+  ++ G A   ++G+ ++++YS  G +  A++  + M ++
Sbjct: 141 AALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRM-EA 199

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              V + + ++   RN +   A++   QM R     +E T +S+L  C         EQI
Sbjct: 200 PDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGEQI 255

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  ++K     +V+  ++LI+ Y++ G +  A+ VF  L + +VVSW SM++   ++GR 
Sbjct: 256 HGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRL 315

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
             A+ +F +M+ EG++P    F   LSAC   G V  G+++  S +K   ++ +    + 
Sbjct: 316 DDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKR-DLMTDIRVSNA 371

Query: 564 MVDLLGRAG---KLEIALIFISN 583
           ++ + GR+G   +LE  L  I N
Sbjct: 372 LLSMYGRSGFVSELEAVLGKIEN 394



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 18/252 (7%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V+W   I+G  RN + E A   F+ M+ +  A ++F  ++ L AC+   +L   EQ+HS 
Sbjct: 102 VAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSL 161

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            V++ F ++  +GS LIE Y++CGS   AE VF ++ A DVV + S++ A  +NG   +A
Sbjct: 162 AVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARA 221

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCM 564
           + +  +M  +G++P   T  ++L+ C   G+   G+++   M+K  G    ++ Y  + +
Sbjct: 222 VDVLCQMTRQGLQPNEHTMTSMLAECPR-GI---GEQIHGYMLKVMG---SQSVYASTAL 274

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC----RCHSDLKM-AEFISKQILEL 619
           +D   R G    A     NL  K     W  +   C    R    L++ +E IS+ +   
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVS-WCSMMQLCIRDGRLDDALRVFSEMISEGV--- 330

Query: 620 DPDDAAVYVTLS 631
            P++ A  + LS
Sbjct: 331 QPNEFAFSIALS 342



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           ++   K G   DA  +F ++   +VV+W + I   ++NGR   A  +F  M+  G+ P +
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
               A L+AC+ +G +  G++V  S+    G   +    SC+++L  R G L  A
Sbjct: 137 FACNAALAACAAAGALGLGEQV-HSLAVRAGFAADAWIGSCLIELYSRCGSLRAA 190


>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Cucumis sativus]
          Length = 594

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 301/554 (54%), Gaps = 5/554 (0%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           G      +L+  Y   G  +    +  ++P  D+ +   ++ G+     + QA++ F ++
Sbjct: 41  GPSVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEM 100

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI-KCGM 268
              +VQPN +T S++L  C  + A+  G   H+   K        V NALL MY   C  
Sbjct: 101 LRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCAT 160

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGD-YEKPLRLVCLMREDGIDPNEYTFTVALA 327
           M+DA SVF  +  +  +SWT +I GF   GD Y   L    ++ ED + PN ++F++A  
Sbjct: 161 MDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED-VGPNSFSFSIAAR 219

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +CAS+ +   G   HA V K G+     V  +I+DMY     + +AK+   E+ +  + +
Sbjct: 220 ACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEK-NLI 278

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +WN  IAG+ R+  + E++  F QM       + FT++SI  AC+ L  L+  +Q+H  I
Sbjct: 279 TWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGI 337

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V+  F+ NV + +SLI+ Y KCGS  D+ ++F  +   D+VSW +M+  Y  +G  ++A+
Sbjct: 338 VRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAV 397

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF++MV  GI+P    F+ VL  CSH+GLV  G K F SM+++Y I P++  Y C+VDL
Sbjct: 398 KLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDL 457

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
           LGRAG++E A   + N+P +P   +W  L  AC+ +    +    ++++L+  P+ A  Y
Sbjct: 458 LGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTY 517

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           + LS +YA  G   +  + RKLMK     KE G SWIE+ N++Y F    K    +  V+
Sbjct: 518 LLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWVH 577

Query: 688 EKLKQLMQQIEDIG 701
           + +  L+  ++D G
Sbjct: 578 KVIDVLIWHMKDDG 591



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 210/488 (43%), Gaps = 62/488 (12%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYS--TRNDSFPDGFIDDGCSNTVP 105
           AC LFN+ P+R  ++ + +I  G+ +      +   +S   R++  P+ F          
Sbjct: 62  ACNLFNEIPERDVVTWTAMIV-GFTSCNHYHQAWTMFSEMLRSEVQPNAFT--------- 111

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY-AK 164
                         +  VL  C   + L  G   H+L TK  +    +V  +L++MY A 
Sbjct: 112 --------------MSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAAS 157

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           C  +   ++V   +P     S   L+AG+            F ++   DV PN +++S  
Sbjct: 158 CATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIA 217

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
              C S+S+   GKQ+HA   K        V N++L MY +C  + DA+  F  L ++N+
Sbjct: 218 ARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNL 277

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           I+W  +I G+++  D  + L L   M  +G  PN +TFT   A+CA+L     G   H  
Sbjct: 278 ITWNTLIAGYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +++RG      +  +++DMY+  G I ++ K   +M      VSW   + G+  +   +E
Sbjct: 337 IVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDM-PGRDLVSWTTMMIGYGAHGYGKE 395

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           A++ F +MV++    D   +  +L  CS           H+ +V    +  +    S++E
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCS-----------HAGLV----DKGLKYFRSMLE 440

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            YN                  D   +  ++    + GR  +A  L E M  E   P  S 
Sbjct: 441 DYN---------------INPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFE---PDESV 482

Query: 525 FLAVLSAC 532
           + A+L AC
Sbjct: 483 WGALLGAC 490



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/262 (21%), Positives = 106/262 (40%), Gaps = 35/262 (13%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           + + C+    L  G++ H  I +     +  +  SL++MYAKCG I     +   MP  D
Sbjct: 317 ITAACANLAVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRD 376

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++ GY  +    +A   F ++    +QP+   +  +L  C     +D+G     
Sbjct: 377 LVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKG----- 431

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
               L+Y                  M+ED     +  + R       +++   + G  E+
Sbjct: 432 ----LKYFRS---------------MLEDYNINPDQEIYR------CVVDLLGRAGRVEE 466

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR--GMALGDFVGTAI 360
             +LV  M     +P+E  +   L +C + + S++G +   +V+ R   MA    + + I
Sbjct: 467 AFQLVENMP---FEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523

Query: 361 VDMYSGLGEIWEAKKQLKEMGK 382
                  GE  + +K +K M K
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNK 545


>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 193/568 (33%), Positives = 304/568 (53%), Gaps = 5/568 (0%)

Query: 135 LGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           LGR  HA I KT       F+   LVNMYAK   + S   +++  P   + +   L+AG 
Sbjct: 24  LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
            +N  F  A   F  +    V+PN +T+  +L     L     GKQLHA  +K   ++  
Sbjct: 84  VQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDV 143

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP-LRLVCLMRE 312
            V  ++  MY K G + DA  VF+ +  RN+ +W A I+    HG  E   +  + L+R 
Sbjct: 144 FVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRV 203

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G  P+  TF   L +C+       G   H  +I+ G      V   ++D Y   GE+  
Sbjct: 204 GG-KPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVEC 262

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           ++     MG+  +SVSW++ IA + +N + E+A   F +  + D    +F  SS+L AC+
Sbjct: 263 SEMVFDRMGER-NSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACA 321

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L  +     + +  VK+  E N+ V S+L++ Y KCGS ++AE+ F+ +   ++VSWN+
Sbjct: 322 GLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNA 381

Query: 493 MIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++  Y+  G A KA+ L E+M    GI P+  + +  LSACS +G ++ G K+FESM + 
Sbjct: 382 LLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKER 441

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YG+ P   HY+C+VDLLGRAG +E A  FI  +P  PT  IW  L  ACR H   ++ + 
Sbjct: 442 YGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKL 501

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            ++++ ELDP D+  +V LSNM+A  G   +    R  MK   I K  G SWI V ++I+
Sbjct: 502 AAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIH 561

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIED 699
            F +++KSH + P++ + L +L ++++D
Sbjct: 562 MFQAKDKSHEKDPEIQDILGKLRKEMQD 589



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 2/282 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ CS +  L  G + H  I ++    +  V+  L++ Y KCG+++    V  +M   + 
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S + L+A Y +N   ++A   FL+    D++P  +  S++L  C  LS I+ G+ + A 
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V++AL+ MY KCG +++AE  F  + +RN++SW A++ G+   G   K 
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395

Query: 304 LRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIV 361
           + L+  M    GI P+  +   AL++C+   +   G  +F +   + G+  G      +V
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLV 455

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           D+    G +  A   +K M    +   W A +     + K E
Sbjct: 456 DLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C+    +E GR   AL  K  V  + FV ++LV+MY KCG I +       MP
Sbjct: 313 VSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP 372

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             ++ S N LL GYA     ++A +   ++     + P++ +    L+ C     +  G 
Sbjct: 373 ERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGM 432

Query: 239 QLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFK 295
           ++  ++MK +Y  +    +   L+ +  + GM+E A    + +     IS W A++   +
Sbjct: 433 KIF-ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACR 491

Query: 296 QHGDYE 301
            HG  E
Sbjct: 492 MHGKPE 497


>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Cucumis sativus]
          Length = 606

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 301/567 (53%), Gaps = 3/567 (0%)

Query: 135 LGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           LGR  HA I KT       F+   LVNMYAK   + S   +++  P   + +   L+AG 
Sbjct: 24  LGRAAHAQILKTLKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAPCRSVVTWTALIAGS 83

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
            +N  F  A   F  +    V+PN +T+  +L     L     GKQLHA  +K   ++  
Sbjct: 84  VQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKASTGLRMDTTGKQLHALAVKEGLINDV 143

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V  ++  MY K G + DA  VF+ +  RN+ +W A I+    HG  E  +     +   
Sbjct: 144 FVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISNSVLHGRPEDSVIAFIELLRV 203

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  P+  TF   L +C+       G   H  +I+ G      V   ++D Y   GE+  +
Sbjct: 204 GGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECS 263

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +     MG+  +SVSW++ IA + +N + E+A   F +  + D    +F  SS+L AC+ 
Sbjct: 264 EMVFDRMGER-NSVSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAG 322

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L  +     + +  VK+  E N+ V S+L++ Y KCGS ++AE+ F+ +   ++VSWN++
Sbjct: 323 LSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNAL 382

Query: 494 IKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           +  Y+  G A KA+ L E+M    GI P+  + +  LSACS +G ++ G K+FESM + Y
Sbjct: 383 LGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERY 442

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G+ P   HY+C+VDLLGRAG +E A  FI  +P  PT  IW  L  ACR H   ++ +  
Sbjct: 443 GVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPELGKLA 502

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++++ ELDP D+  +V LSNM+A  G   +    R  MK   I K  G SWI V ++I+ 
Sbjct: 503 AEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEVGIKKGAGFSWITVDSRIHM 562

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIED 699
           F +++KSH + P++ + L +L ++++D
Sbjct: 563 FQAKDKSHEKDPEIQDILGKLRKEMQD 589



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 2/282 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ CS +  L  G + H  I ++    +  V+  L++ Y KCG+++    V  +M   + 
Sbjct: 216 LNACSDKLGLGPGCQLHGFIIRSGYGQNVSVSNGLIDFYGKCGEVECSEMVFDRMGERNS 275

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S + L+A Y +N   ++A   FL+    D++P  +  S++L  C  LS I+ G+ + A 
Sbjct: 276 VSWSSLIAAYVQNNEEEKASCLFLRARKEDIEPTDFMVSSVLCACAGLSEIEFGRSVQAL 335

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V++AL+ MY KCG +++AE  F  + +RN++SW A++ G+   G   K 
Sbjct: 336 AVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMPERNLVSWNALLGGYAHQGHANKA 395

Query: 304 LRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIV 361
           + L+  M    GI P+  +   AL++C+   +   G  +F +   + G+  G      +V
Sbjct: 396 VALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGMKIFESMKERYGVEPGPEHYACLV 455

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           D+    G +  A   +K M    +   W A +     + K E
Sbjct: 456 DLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACRMHGKPE 497



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C+    +E GR   AL  K  V  + FV ++LV+MY KCG I +       MP
Sbjct: 313 VSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDNAEQAFNAMP 372

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             ++ S N LL GYA     ++A +   ++     + P++ +    L+ C     +  G 
Sbjct: 373 ERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACSRAGDLKTGM 432

Query: 239 QLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFK 295
           ++  ++MK +Y  +    +   L+ +  + GM+E A    + +     IS W A++   +
Sbjct: 433 KIF-ESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIWGALLGACR 491

Query: 296 QHGDYE 301
            HG  E
Sbjct: 492 MHGKPE 497


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 193/616 (31%), Positives = 336/616 (54%), Gaps = 66/616 (10%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y K G++ +  A+  QMP  D+ S N +L+G+A+N   ++A   F ++    +  N
Sbjct: 128 MLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKN 183

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ----------YLSKTAVSNA--------- 258
             +++ +L+       I++ ++L    M  +          Y+ K  + +A         
Sbjct: 184 EISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPV 243

Query: 259 --------LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
                   ++T Y + G++ +A  +FE L  R+V +WTA+++GF Q+G  ++  R+    
Sbjct: 244 RDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIF--- 300

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT-------AIVDM 363
            E+  + NE ++   +A          GY+  +Q I++   L D + +        +V  
Sbjct: 301 -EEMPEKNEVSWNAMIA----------GYV-QSQQIEKARELFDQMPSRNTSSWNTMVTG 348

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G I +AK    EM +    +SW A I+G+ ++ ++EEA+  F +M R+    +   
Sbjct: 349 YAQCGNIDQAKILFDEMPQR-DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSA 407

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +  L +C+ + +L   +Q+H R+VK+ F++    G++L+  Y KCGS E+A  VF  +T
Sbjct: 408 LACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D+VSWN+MI  Y+++G  ++A+ LFE M +  I+P + T + VLSACSH+G V  G +
Sbjct: 468 EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGME 526

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            F SM + YGI     HY+CM+DLLGRAG+L+ AL  + ++P  P A  W  L  A R H
Sbjct: 527 YFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIH 586

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            D ++ E  ++++ E++PD++ +YV LSN+YA +G   +  E R  M+ K + K PG SW
Sbjct: 587 GDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSW 646

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVL 712
           +E+ NK + F   + SH E  ++Y  L++L  +++  G             + EKE  + 
Sbjct: 647 VEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLK 706

Query: 713 YHSERLAVGFGLISLP 728
           YHSE+LAV FG++S+P
Sbjct: 707 YHSEKLAVAFGILSIP 722



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 100/482 (20%), Positives = 212/482 (43%), Gaps = 59/482 (12%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           DI   N  ++ Y +    + A S F   +G+  + +  TY+ M++   S +  D  +++ 
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVF---NGMR-RRSTVTYNAMISGYLSNNKFDCARKVF 114

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            +      +S     N +L+ Y+K G +  A ++F  + +++V+SW A+++GF Q+G  E
Sbjct: 115 EKMPDRDLIS----WNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVE 170

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALAS---------CASLRNSHMGYMFHAQVIKRGMAL 352
           +  ++   M    +  NE ++   L++            L +S M +    +++     +
Sbjct: 171 EARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDW----EIVSWNCLM 222

Query: 353 GDFVGTAIVD----------------------MYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           G +V    +D                       Y+  G + EA++  +E+       +W 
Sbjct: 223 GGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL-PIRDVFAWT 281

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A ++GF +N   +EA   F +M   +        +  +++  +  +    +Q+ SR    
Sbjct: 282 AMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR---- 337

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               N    ++++  Y +CG+ + A+ +F ++   D +SW +MI  Y+Q+G++ +A+ LF
Sbjct: 338 ----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLF 393

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            KM  +G     S     LS+C+    ++ G+++   +VK  G        + ++ + G+
Sbjct: 394 IKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKA-GFQTGYIAGNALLAMYGK 452

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI-LELDPDDAAVYVT 629
            G +E A     ++  K     W  + A    H   K A  + + + + + PDD  +   
Sbjct: 453 CGSIEEAFDVFEDITEKDIVS-WNTMIAGYARHGFGKEALALFESMKMTIKPDDVTLVGV 511

Query: 630 LS 631
           LS
Sbjct: 512 LS 513



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYM---NIEEKGISRNGYSTRN----DSFPDGFIDDGC 100
           A +LF++ P R   S+ + +  GY    NI++  I  +    R+     +   G+   G 
Sbjct: 327 ARELFDQMPSR-NTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQ 385

Query: 101 SNTVPVTCYSLE---SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           S         ++    +L++  +   LS C+    LELG++ H  + K           +
Sbjct: 386 SEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNA 445

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+ MY KCG I+    V + +   DI S N ++AGYA++    +A + F  +  + ++P+
Sbjct: 446 LLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPD 504

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVF 276
             T   +L+ C     +D+G +      +   ++  A     ++ +  + G +++A ++ 
Sbjct: 505 DVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLM 564

Query: 277 EGL-VQRNVISWTAIINGFKQHGDYE 301
           + +    +  +W A++   + HGD E
Sbjct: 565 KSMPFYPDAATWGALLGASRIHGDTE 590


>gi|297795827|ref|XP_002865798.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311633|gb|EFH42057.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 701

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 181/556 (32%), Positives = 321/556 (57%), Gaps = 17/556 (3%)

Query: 199 FDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
           F +AF  F  L+     +    TY  ++  C  L +I   K+++   +   +  +  + N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFIISNGFEPEKYMMN 162

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
            +L M++KCGM+ DA  +F+ + +RN+ S+ +II+GF   G+YE+   L  LM E+  D 
Sbjct: 163 RILLMHVKCGMIIDARRLFDEMPERNLFSYNSIISGFVNFGNYEEAFELFKLMWEELSDC 222

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             +TF V L + A L + ++G   H   +K G+    FV   ++DMYS  G+I +A+   
Sbjct: 223 ETHTFAVMLRASAGLWSVYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           + M +  ++V+WN  +AG+  +  +EEA+    +M  +  + D+FT S +++  + L  L
Sbjct: 283 ESMPEK-TTVAWNNIVAGYALHGYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAKL 341

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q H+ +++S FES +   ++L++ Y+K G  + A  VF +L   +++SWN+++  Y
Sbjct: 342 ELTKQAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           + +GR   A+ LFE+M+   + P + TFLAVLSAC++SGL + G ++F SM + +GI P 
Sbjct: 402 ANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CM++LLGR G L+ A+ FI   P+K T  +W  L  ACR   +L++   +++++ 
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQGNLELGRVVAEKLY 521

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
            + P+    YV L NMY   G  A+A    + ++ K +S  P C+W+EV ++ + F S +
Sbjct: 522 GMGPEKLGNYVVLYNMYNSMGKTAEAAGVLETLESKGLSMIPACTWVEVGDQTHSFLSGD 581

Query: 678 K--SHSEMPK--VYEKLKQLMQQIEDIGH----------TDNEKEDRV-LYHSERLAVGF 722
           +  S++E  K  VY+K+ +LM++I + G+           D ++E+RV  YHSE+LA+ +
Sbjct: 582 RFDSYNETVKREVYQKVDELMEEIYEYGYLAEEKNLLPDVDEKEEERVGRYHSEKLAIAY 641

Query: 723 GLISLPAKNKFECSRT 738
           GL++ P  N  + ++ 
Sbjct: 642 GLMNTPEWNPLQITQN 657



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 106/205 (51%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G++ H    K  V  + FV+  L++MY+KCGDI+      + MP     + N ++AGYA
Sbjct: 242 VGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFESMPEKTTVAWNNIVAGYA 301

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
            +   ++A     ++    V  + +T S M+ I   L+ ++  KQ HA  ++  + S+  
Sbjct: 302 LHGYSEEALCLLYEMRDSGVSMDQFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIV 361

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            + AL+  Y K G ++ A  VF+ L ++N+ISW A++ G+  HG     +RL   M    
Sbjct: 362 ANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAK 421

Query: 315 IDPNEYTFTVALASCASLRNSHMGY 339
           + PN  TF   L++CA    S  G+
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGW 446



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 3/187 (1%)

Query: 118 QFVIEVLSYCS-REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           QF + ++   S R   LEL ++ HA + ++    +     +LV+ Y+K G + +   V  
Sbjct: 325 QFTLSIMIRISTRLAKLELTKQAHASLIRSGFESEIVANTALVDFYSKWGRVDTARYVFD 384

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           ++P  +I S N L+ GYA +     A   F ++    V PNH T+  +L+ C      ++
Sbjct: 385 KLPRKNIISWNALMGGYANHGRGTDAVRLFERMIAAKVAPNHVTFLAVLSACAYSGLSEQ 444

Query: 237 GKQLHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIINGF 294
           G ++     ++  +   A+  A ++ +  + G++++A + +    ++  V  W A++N  
Sbjct: 445 GWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNAC 504

Query: 295 KQHGDYE 301
           +  G+ E
Sbjct: 505 RMQGNLE 511


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 193/625 (30%), Positives = 318/625 (50%), Gaps = 34/625 (5%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   +  +L  C++    +LGR  H    K     D FV  +L+NMY KCG + S   V
Sbjct: 86  LDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLV 145

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             QMP  D+ S   +L  Y ++  F +A     ++  + V+ +     +++A+ G+L  +
Sbjct: 146 FDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDM 205

Query: 235 DEGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
             G+ +H   ++     K  VS   AL+ MY K G +  A+ +F+ L +R+V+SWT +I 
Sbjct: 206 KSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIA 265

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G  +    ++  +    M E+ + PNE T    +  C  +    +G  FHA +++ G  +
Sbjct: 266 GCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGM 325

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              + TA++DMY   G++  A+     + K    + W+  I+ +      ++    F +M
Sbjct: 326 SLALVTALIDMYGKCGQVGYARALFNGVKKKDVKI-WSVLISAYAHVSCMDQVFNLFVEM 384

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           + ND   +  T  S+L  C+   +L   +  H+ I +   E +V + ++LI  Y KCG  
Sbjct: 385 LNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDV 444

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A  +F++    D+  WN+M+  +S +G  ++A+ LF +M   G+ P + TF+++  AC
Sbjct: 445 TIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHAC 504

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SHSGL++                    HY C+VDLLGRAG L+ A   I N+P++P   I
Sbjct: 505 SHSGLME--------------------HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTII 544

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L AAC+ H +L + E  +++ILELDP +    V  SN+YA A    D    R+ M  
Sbjct: 545 WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSH 604

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------- 705
             + KEPG SWIEV   ++ F S +K+ ++  KVYE + ++  ++ + G+T N       
Sbjct: 605 SGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLN 664

Query: 706 ----EKEDRVLYHSERLAVGFGLIS 726
               EKE  + YHSE+LA  FGLIS
Sbjct: 665 IDEEEKESALSYHSEKLATAFGLIS 689



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 116/256 (45%), Gaps = 9/256 (3%)

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSR 446
           ++N  I+ +  N   + +   +  M  NDAA  D F   S+LKAC+   S     ++H  
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
             K+ F S+V V ++L+  Y KCG    A  VF Q+   DVVSW +M+  Y ++    +A
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMV 565
           + L  +M   G++ +    +++++   +   ++ G+ V   +V+  G    E    + ++
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDD 623
           D+  + G L  A      L  K +   W  + A C   C  D     F      +L P++
Sbjct: 234 DMYCKGGCLASAQRLFDRLS-KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNE 292

Query: 624 AAVYVTLSNMYAEAGL 639
               +TL ++  E G 
Sbjct: 293 ----ITLLSLITECGF 304


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 198/626 (31%), Positives = 325/626 (51%), Gaps = 19/626 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  C+R   L+ GR  H+   +  V   D +   SL+  YA+ G +     V   MP  
Sbjct: 114 VLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR 173

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           D+ + N ++ GY  N L   A   F ++ + ++VQ +       LA C   SA+ +G+++
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++        V  ++L MY KCG +  AE VF  +  R V++W  +I G+  +   
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           E+       M+ +G      T    LA+CA   +S  G   H  + +R       + TA+
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           ++MYS +G++  ++K   +M  + + VSWN  IA +   +   EAI  F  ++      D
Sbjct: 354 LEMYSKVGKVKSSEKVFGQM-TTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPD 412

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            FT S+++ A  LL  L  C Q+HS I++  +  N  + ++++  Y +CG    +  +F 
Sbjct: 413 YFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFD 472

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++ A DV+SWN+MI  Y+ +G+ R A+ +F +M   G+RP  STF++VL+ACS SGL  +
Sbjct: 473 KMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDE 532

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   F SM ++YG++P+  HY CM DLLGRAG L+  + FI N+PI PT  +W  L  A 
Sbjct: 533 GWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTAS 592

Query: 601 RCHSDLKMAEFISKQILELDP-----DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           R  +D+ +AE+ +++I +L+      D+   YV +S+MYA+AG   D E  + LM+ K +
Sbjct: 593 RNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGL 652

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE----------KLKQLMQQIEDIGHTDN 705
            +    S +E++     F + + +H +   + E          +++  M Q  D    D+
Sbjct: 653 RRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMNQ-SDPTSLDS 711

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKN 731
            +      HS RLAV FGLIS  A+ 
Sbjct: 712 RRTTEPNKHSVRLAVVFGLISTEART 737



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 181/345 (52%), Gaps = 17/345 (4%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAE 273
           +P+ +T+  +L  C  L A+DEG+  H+  ++L   +      N+LL  Y + G+++DAE
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL--------MREDGIDPNEYTFTVA 325
            VF+G+  R+V++W ++++G+  +G     L LVC         ++ DG+         A
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNG--LGTLALVCFREMHEALEVQHDGVG-----IIAA 217

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           LA+C        G   HA VI+ GM     VGT+I+DMY   G+I  A+     M  S +
Sbjct: 218 LAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATM-PSRT 276

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+WN  I G+  N++ EEA + F QM       +  T  ++L AC+   S      +H 
Sbjct: 277 VVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHG 336

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I + +F  +V + ++L+E Y+K G  + +E+VF Q+T   +VSWN+MI AY       +
Sbjct: 337 YITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYME 396

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           AI LF  ++ + + P   T  AV+ A    GL++  +++   +++
Sbjct: 397 AITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIR 441



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 7/350 (2%)

Query: 89  DSFPDGFIDDGCSNTVPVTCY-----SLESLLDKQFVIEVLSYCSREECLELGRRYHALI 143
           +S  DG++ +G   T+ + C+     +LE   D   +I  L+ C  E  L  GR  HA +
Sbjct: 179 NSMVDGYVSNGL-GTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYV 237

Query: 144 TKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
            +  +  D  V  S+++MY KCGDI S   V   MP   + + NC++ GYA N   ++AF
Sbjct: 238 IRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAF 297

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
             F+++     Q    T   +LA C    +   G+ +H    + Q+L    +  ALL MY
Sbjct: 298 DCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMY 357

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            K G ++ +E VF  +  + ++SW  +I  +     Y + + L   +    + P+ +T +
Sbjct: 358 SKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMS 417

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             + +   L         H+ +I+ G      +  AI+ MY+  G++  +++   +M  +
Sbjct: 418 AVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMA-A 476

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
              +SWN  I G+  + +   A+E FS+M  N    +E T+ S+L ACS+
Sbjct: 477 KDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSV 526



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 160/350 (45%), Gaps = 5/350 (1%)

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
           K   + +L+  +   G M+DA+        R+      +I G    G     L     M 
Sbjct: 41  KPGGTKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAML 100

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEI 370
             G  P+ +TF V L  CA L     G   H+  I+ G+A  D + G +++  Y+ LG +
Sbjct: 101 AAGARPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLV 160

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN-DAACDEFTYSSILK 429
            +A++    M  +   V+WN+ + G+  N     A+  F +M    +   D     + L 
Sbjct: 161 DDAERVFDGM-PARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALA 219

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC L  +L    ++H+ +++   E +V VG+S+++ Y KCG    AE VF+ + +  VV+
Sbjct: 220 ACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVT 279

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN MI  Y+ N R  +A   F +M  EG +    T + +L+AC+ +     G+ V   + 
Sbjct: 280 WNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYIT 339

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +    LP     + ++++  + GK++ +      +  K T   W  + AA
Sbjct: 340 RRQ-FLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTK-TLVSWNNMIAA 387


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 198/590 (33%), Positives = 322/590 (54%), Gaps = 33/590 (5%)

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           +++SM    K +    + S N ++A +A++    QA   F  +  + + PN  T+   + 
Sbjct: 37  NLRSMFG--KYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIK 94

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C SL  +  GKQ+H Q     Y S   V++AL+ MY KCG + DA  +F+ + +RNV+S
Sbjct: 95  SCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVS 154

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMRE----DGIDPNEYT----------FTVALASCASL 332
           WT++I+G+ Q+   E+    V L +E    D  D +E                +++CA +
Sbjct: 155 WTSMISGYVQN---ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV 211

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
               +    H   +K+G      VG  ++D Y+  GEI  ++K    M +     SWN+ 
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGM-EETDVCSWNSL 270

Query: 393 IAGFFRNQKTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
           IA + +N  + EA   FS MV R +   +  T S++L AC+   +L   + IH ++VK +
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            E N+ VG+S+++ Y KCG  E A + F +L   +V SW  M+  Y  +G  ++A+ +F 
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFY 390

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M+  GI+P   TF++VL+ACSH+GL+++G   F  M  E+ + P   HYSCMVDLLGRA
Sbjct: 391 EMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRA 450

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G L+ A   I  + +KP   +W  L  ACR H ++++ E  ++++ +LDP +   YV LS
Sbjct: 451 GYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLS 510

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YA+AG   D E  R LMK   + K PG S +E   +++ F   +K H +  K+YE L 
Sbjct: 511 NIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLD 570

Query: 692 QLMQQIEDIGH----------TDNEKEDRVL-YHSERLAVGFGLI-SLPA 729
           +L  +++++G+           D E++  VL  HSE+LAV FG++ S+P 
Sbjct: 571 ELNVKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPG 620



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/473 (22%), Positives = 208/473 (43%), Gaps = 29/473 (6%)

Query: 127 CSREECLEL-----GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           C+ + C  L     G++ H          D FV ++L++MY+KCG +     +  ++P  
Sbjct: 91  CTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER 150

Query: 182 DIASCNCLLAGYAKNALFDQA---FSFFLKLDGIDVQP--------NHYTYSTMLAICGS 230
           ++ S   +++GY +N    +A   F  FL +D  D           +      +++ C  
Sbjct: 151 NVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACAR 210

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           +      + +H   +K  +    AV N L+  Y KCG +  +  VF+G+ + +V SW ++
Sbjct: 211 VCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSL 270

Query: 291 INGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           I  + Q+G   +   L   M + G +  N  T +  L +CA      +G   H QV+K  
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     VGT+IVDMY   G +  A+K    + K  +  SW   +AG+  +   +EA++ F
Sbjct: 331 LEDNLVVGTSIVDMYCKCGRVEMARKAFDRL-KRKNVKSWTVMVAGYGMHGHGKEAMKVF 389

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF--ESNVHVGSSLIEAYN 467
            +M+R     +  T+ S+L ACS    L       +++ K +F  E  +   S +++   
Sbjct: 390 YEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKM-KCEFDVEPGIEHYSCMVDLLG 448

Query: 468 KCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           + G  ++A  +  ++    D + W S++ A   +       I   K+    + P+N  + 
Sbjct: 449 RAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLF--KLDPSNCGYY 506

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
            +LS         D  +    ++K +G+L    +      ++   G++ + L+
Sbjct: 507 VLLSNIYADAGRWDDVERMRILMKNHGLLKTPGY-----SIVEHKGRVHVFLV 554



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 137/289 (47%), Gaps = 13/289 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+S C+R     +    H L  K    G   V  +L++ YAKCG+I     V   M   D
Sbjct: 204 VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD 263

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S N L+A YA+N L  +AFS F  +    +V+ N  T S +L  C    A+  GK +H
Sbjct: 264 VCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIH 323

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q +K++      V  +++ MY KCG +E A   F+ L ++NV SWT ++ G+  HG  +
Sbjct: 324 DQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGK 383

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDF 355
           + +++   M   GI PN  TF   LA+C     SH G +      F+    +  +  G  
Sbjct: 384 EAMKVFYEMIRCGIKPNYITFVSVLAAC-----SHAGLLKEGWHWFNKMKCEFDVEPGIE 438

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
             + +VD+    G + EA   ++EM      + W + + G  R  K  E
Sbjct: 439 HYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGS-LLGACRIHKNVE 486



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/282 (19%), Positives = 127/282 (45%), Gaps = 17/282 (6%)

Query: 61  LSTSDLIFNGYMNIEEKGISR---NGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDK 117
           L+  + + + Y    E  +SR   +G    +    +  I     N + V  +SL S + K
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292

Query: 118 QFVIE--------VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           +  +         VL  C+    L++G+  H  + K  +  +  V  S+V+MY KCG ++
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
                  ++   ++ S   ++AGY  +    +A   F ++    ++PN+ T+ ++LA C 
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVIS 286
               + EG     + MK ++  +  + +   ++ +  + G +++A  + + + V+ + I 
Sbjct: 413 HAGLLKEGWHWFNK-MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIV 471

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           W +++   + H + E  L  +   +   +DP+   + V L++
Sbjct: 472 WGSLLGACRIHKNVE--LGEISARKLFKLDPSNCGYYVLLSN 511


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 186/564 (32%), Positives = 304/564 (53%), Gaps = 19/564 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + HAL  KT+   D FV +SL+NMY K G +     V   +P  +  S   +++GYA 
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAM 191

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
             +  +A+  FL +   +   + + Y+++L+       +  GKQ+H   +K   LS  +V
Sbjct: 192 ERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASV 251

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+TMY KCG ++DA   FE    ++ I+W+A+I G+ Q GD  + L L   M  +G 
Sbjct: 252 GNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGN 311

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+E+TF   + +C+ +     G   H   +K G     +       + +  G + +A+K
Sbjct: 312 KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARK 371

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + K    V W +                   +M        E T +S+L+ACS L 
Sbjct: 372 GFDYL-KEPDIVLWTS------------------CRMQMERIMPHELTMASVLRACSSLA 412

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L   +QIH++ +K  F   V +GS+L   Y KCGS ED   VF ++ + D+++WN+MI 
Sbjct: 413 ALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMIS 472

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQNG   KA+ LFE++     +P   TF+ VLSACSH GLV+ G+  F  M+ E+GI+
Sbjct: 473 GLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGII 532

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+CMVD+L RAGKL     FI +  I     +WR L  ACR + + ++  +  ++
Sbjct: 533 PRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEK 592

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ++EL   +++ Y+ LS++Y   G   D E  R+LMK++ ++KEPGCSWIE+ ++++ F  
Sbjct: 593 LMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVV 652

Query: 676 QNKSHSEMPKVYEKLKQLMQQIED 699
            ++ H ++ K+  +L++L   ++D
Sbjct: 653 GDQIHPQIVKICSELRRLRDHMKD 676



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 215/467 (46%), Gaps = 22/467 (4%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C+R++ L+ G+  HA + +T      ++T SLVN+YAKCG I     V + +  
Sbjct: 14  VDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITN 73

Query: 181 LDIASCNCLLAGYAKNALFDQAF--SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            D+ S NCL+ GY++      +F    F ++   +  PN +T+S +     S      G 
Sbjct: 74  KDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGL 133

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q HA  +K        V ++L+ MY K G M DA  VF+ + +RN +SW  II+G+    
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMER 193

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              +   L  LMR +    +++ +T  L++       H G   H   +K G+     VG 
Sbjct: 194 MAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGN 253

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V MY   G + +A K   E+      ++W+A I G+ +   + EA+  F  M  N   
Sbjct: 254 ALVTMYGKCGCLDDAFKTF-ELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNK 312

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             EFT+  ++ ACS + +L   +QIH   +K+ +E  ++          KCGS  DA + 
Sbjct: 313 PSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKG 372

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  L   D+V W S                   +M +E I P   T  +VL ACS    +
Sbjct: 373 FDYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLAAL 414

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + G+++    +K YG   E    S +  +  + G LE   +    +P
Sbjct: 415 EQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 460



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 183/331 (55%), Gaps = 3/331 (0%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P H ++  +L  C     + +GK +HAQ ++    S   ++N+L+ +Y KCG +  A+ V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 276 FEGLVQRNVISWTAIINGFKQHG--DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           FE +  ++V+SW  +ING+ Q G   Y   + L   MR +   PN +TF+    + +S  
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
            +  G   HA  IK       FVG+++++MY  +G + +A+K    + +  ++VSW   I
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPER-NTVSWATII 186

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+   +   EA E F  M R + A D+F Y+S+L A ++   +   +QIH   +K+   
Sbjct: 187 SGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           S   VG++L+  Y KCG  +DA + F      D ++W++MI  Y+Q G + +A+ LF  M
Sbjct: 247 SIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM 306

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            + G +P+  TF+ V++ACS  G +++G+++
Sbjct: 307 HLNGNKPSEFTFVGVINACSDIGALEEGKQI 337



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 20/341 (5%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E   DK     VLS  +  + +  G++ H L  K  +     V  +LV MY KCG +   
Sbjct: 209 EGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
               +     D  + + ++ GYA+     +A + F  +     +P+ +T+  ++  C  +
Sbjct: 269 FKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            A++EGKQ+H  ++K  Y  +         +  KCG + DA   F+ L + +++ WT+  
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS-- 386

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
                           C M+ + I P+E T    L +C+SL     G   HAQ IK G +
Sbjct: 387 ----------------CRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 430

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L   +G+A+  MY+  G + +     + M  S   ++WNA I+G  +N +  +A+E F +
Sbjct: 431 LEVPIGSALSTMYAKCGSLEDGNLVFRRM-PSRDIMTWNAMISGLSQNGEGLKALELFEE 489

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           +       D  T+ ++L ACS +  L    +++ R++  +F
Sbjct: 490 LRHGTTKPDYVTFVNVLSACSHM-GLVERGKVYFRMMLDEF 529


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 186/560 (33%), Positives = 307/560 (54%), Gaps = 20/560 (3%)

Query: 199 FDQAFSFFL------KLDGIDVQPN-HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           F Q+F   L       +D    QP  HY Y+++L  C    A++ GKQLHAQ   L    
Sbjct: 21  FSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAY 80

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              ++  L+ +Y     + +A ++F+ + ++N+  W  +I G+  +G ++  + L   M 
Sbjct: 81  NQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKML 140

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           + G+ P+ +T    L +C++L     G   H  VIK G     FVG A++DMY+  G + 
Sbjct: 141 DYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVM 200

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A +   ++     +V WN+ +A + +N   +E+I    +M  N     E T  +++ + 
Sbjct: 201 DAGRVFDKI-VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSS 259

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + +  L    +IH    +  F+SN  V ++LI+ Y KCGS + A  +F +L    VVSWN
Sbjct: 260 ADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWN 319

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I  Y+ +G A  A+ LF+KM  E  RP + TF+ VL+ACS   L+ +G+ ++  MV++
Sbjct: 320 AIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRD 378

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YGI P   HY+CM+DLLG  G+L+ A   I N+ +KP + +W  L  +C+ H ++++AE 
Sbjct: 379 YGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAEL 438

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
             ++++EL+PDD+  YV L+NMYA++G     E+ R++M  K I K   CSWIEV NK+Y
Sbjct: 439 ALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVY 498

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAV 720
            F + + SHS    +Y +LK+L   + + G+            ++EK   V  HSERLA+
Sbjct: 499 AFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAI 558

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FGLIS     +   ++ L 
Sbjct: 559 AFGLISTSPGTRLLITKNLR 578



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 212/466 (45%), Gaps = 26/466 (5%)

Query: 89  DSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
           DSFP            P T Y   SLL           C   + L  G++ HA      +
Sbjct: 38  DSFP----------PQPTTHYGYTSLLQS---------CIDSKALNPGKQLHAQFYHLGI 78

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
             +Q +   LV++YA    + +   +  ++P  ++   N L+ GYA N   D A   + K
Sbjct: 79  AYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHK 138

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +    ++P+++T   +L  C +LSAI EG+ +H   +K  +     V  AL+ MY KCG 
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           + DA  VF+ +V R+ + W +++  + Q+G  ++ + L   M  +G+ P E T    ++S
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A +     G   H    + G    D V TA++DMY+  G + +    L E  +    VS
Sbjct: 259 SADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSV-KVALALFERLREKRVVS 317

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I G+  +     A++ F +M + D   D  T+  +L ACS    L     +++ +V
Sbjct: 318 WNAIITGYAMHGLAVGALDLFDKMRKEDRP-DHITFVGVLAACSRGRLLDEGRALYNLMV 376

Query: 449 KS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKA 506
           +       V   + +I+    CG  ++A  +   ++   D   W +++ +   +G    A
Sbjct: 377 RDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELA 436

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKE 551
            +  EK++   + P +S    +L+   + SG  +  +K+ + M+ +
Sbjct: 437 ELALEKLI--ELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDK 480


>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 193/616 (31%), Positives = 313/616 (50%), Gaps = 81/616 (13%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F   S++  Y+K G +K  + +  +MP  D  S N +++  +++    +  + FL++   
Sbjct: 194 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 253

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
             +PN  TY+++L+ C S+  ++ G  LHA+ ++++          L+ MY KCG +E A
Sbjct: 254 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 313

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+GL + N +SWT++I G  Q G  E+ L L   MRE  +  +++T    L  C S 
Sbjct: 314 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 373

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG----------- 381
           ++  +G   HA  I RG+     V  A+V MY+  G++W+A    + M            
Sbjct: 374 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMI 433

Query: 382 -------------------KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                                 + +SWN+ +A + +    EE ++ + QM+R     D  
Sbjct: 434 TAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWI 493

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+S+ + AC+ L  L    QI ++  K  F SNV V +S++  Y++CG  E+A+++FS +
Sbjct: 494 TFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI 553

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              ++VSWN+M+  Y+QNG+ RK I +FEKM+  G  P   ++++VLS            
Sbjct: 554 VMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLS------------ 601

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
                                  DLLGRAG+LE A   I+ +P KP A IW  L AACR 
Sbjct: 602 -----------------------DLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRI 638

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H + K+AE   K +LELD +    Y  L+N+Y+E+G        RKLM+ K + K PGCS
Sbjct: 639 HGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCS 698

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ---------QIEDIGHTDNEKEDRVLY 713
           WIEV N+++ F   + +H ++  V+  L+++++          + + G + N       Y
Sbjct: 699 WIEVDNRVHVFTVDDTNHPQIKDVHRMLEEIIKKIEEIKNYANVMNSGRSHN-------Y 751

Query: 714 HSERLAVGFGLISLPA 729
           HSE+LAV   LISLPA
Sbjct: 752 HSEKLAVPLRLISLPA 767



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 214/488 (43%), Gaps = 68/488 (13%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    + + R+ HA +    +    F+   L+NMY+ CG I     V   + + ++ S 
Sbjct: 4   CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 63

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGID--------------------------------V 214
           N +++G+A +    +A   F K+   D                                 
Sbjct: 64  NTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVRDCCC 123

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            P+ +++S ++   GSL  +    QLH    K  +   T V  ++L MYIKCG M+ A+ 
Sbjct: 124 VPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQK 183

Query: 275 V-------------------------------FEGLVQRNVISWTAIINGFKQHGDYEKP 303
           V                               F  + +R+ +SW  +I+   QHG   + 
Sbjct: 184 VFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAET 243

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L     M   G  PN  T+   L++C S+ +   G   HA++++    L  + G  ++DM
Sbjct: 244 LNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDM 303

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+  G + E+ +Q+ +     ++VSW + I G  +    EEA+  F+QM     A D+FT
Sbjct: 304 YAKCGRL-ESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFT 362

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +++L  C     ++  EQ+H+  +    +S+V V ++L+  Y KCG    A   F  + 
Sbjct: 363 LATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMP 422

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D++SW +MI A+SQ G   KA   F+KM    +   NS    +L+     G  ++G K
Sbjct: 423 IRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNS----MLATYMQRGYWEEGLK 478

Query: 544 VFESMVKE 551
           V+  M++E
Sbjct: 479 VYIQMLRE 486



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 203/431 (47%), Gaps = 37/431 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LE G   HA I +   C D +    L++MYAKCG ++S   V   +   +
Sbjct: 265 VLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHN 324

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S   L+ G A+    ++A   F ++  + V  + +T +T+L +C S   I  G+QLHA
Sbjct: 325 AVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHA 384

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+     S   V+NAL+TMY KCG +  A   FE +  R++ISWTA+I  F Q GD EK
Sbjct: 385 HTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEK 444

Query: 303 P-------------------------------LRLVCLMREDGIDPNEYTFTVALASCAS 331
                                           L++   M  +G+  +  TF+ ++++CA 
Sbjct: 445 AREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACAD 504

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G    AQ  K G +    V  ++V MYS  G+I EA+K    +    + VSWNA
Sbjct: 505 LAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI-VMKNLVSWNA 563

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +AG+ +N +  + IE F +M+      D+ +Y S+L    LL      EQ  + I +  
Sbjct: 564 MMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLS--DLLGRAGQLEQAKNLINQMP 621

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV---SWNSMIKAYSQNGRARKAII 508
           F+ N  +  +L+ A    G+ + AE     L   D     S+  +   YS++G+ +    
Sbjct: 622 FKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTN 681

Query: 509 LFEKMVVEGIR 519
           + + M  +G+R
Sbjct: 682 VRKLMRDKGVR 692



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 176/432 (40%), Gaps = 108/432 (25%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK---------- 375
           +  CASLR+  +    HAQ+I  G+    F+   +++MYS  G I +A +          
Sbjct: 1   MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60

Query: 376 --------------QLKEMGK------SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
                         Q++E  K         SVSWN+ ++G+F N + E  I+ F  MVR 
Sbjct: 61  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSMVR- 119

Query: 416 DAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           D  C  D F++S ++KA   L  L    Q+H    K  F  +  V +S+++ Y KCG+ +
Sbjct: 120 DCCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMD 179

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK--------------------- 512
            A++VF +     +  WNSMI  YS+ G  +KA+ LF K                     
Sbjct: 180 FAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGF 239

Query: 513 ----------MVVEGIRPTNSTFLAVLSACS-----------HS---------------- 535
                     M  +G RP + T+ +VLSAC+           H+                
Sbjct: 240 GAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCG 299

Query: 536 --------GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
                   G ++  ++VF+ + +   +      ++ ++  + +AG  E AL+  + +   
Sbjct: 300 LIDMYAKCGRLESARQVFDGLTEHNAV-----SWTSLIGGVAQAGFQEEALVLFNQMREV 354

Query: 588 PTAP---IWRPLFAACRCHSDLKMAEFISKQILELDPDDAA-VYVTLSNMYAEAGLQADA 643
           P A        +   C    D+ + E +    +    D +  V   L  MYA+ G    A
Sbjct: 355 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 414

Query: 644 EEQRKLMKMKEI 655
               +LM +++I
Sbjct: 415 NHAFELMPIRDI 426



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 43/329 (13%)

Query: 33  HRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP 92
           H + V ++     Y+ C L +   K   L ++  +F+G    E   +S         S  
Sbjct: 282 HARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL--TEHNAVSWT-------SLI 332

Query: 93  DGFIDDGCSNTVPVTCYSLESL--LDKQFVI-EVLSYCSREECLELGRRYHALITKTAVC 149
            G    G      V    +  +     QF +  VL  C  ++ + +G + HA      + 
Sbjct: 333 GGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLD 392

Query: 150 GDQFVTASLVNMYAKCGDI------------------KSMVAVVKQ-------------M 178
               V  +LV MYAKCGD+                   +M+    Q             M
Sbjct: 393 SSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKM 452

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  ++ S N +LA Y +   +++    ++++    V+ +  T+ST ++ C  L+ +  G 
Sbjct: 453 PERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGN 512

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+ AQ  KL + S  +V+N+++TMY +CG +E+A+ +F  +V +N++SW A++ G+ Q+G
Sbjct: 513 QILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNG 572

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALA 327
              K + +   M   G  P++ ++   L+
Sbjct: 573 QGRKVIEIFEKMLNIGNVPDQISYVSVLS 601


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 197/614 (32%), Positives = 318/614 (51%), Gaps = 13/614 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    L  GR  HA + +     D  V  +L+ MY KCGD+ S   +  +MP  D
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N +++GY +N    +    F ++  + + P+  T +++++ C  L     G QLH+
Sbjct: 201 RISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHS 260

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  Y    +V N+L+ MY+  G  ++AESVF G+  R+V+SWT II+G   +   +K
Sbjct: 261 YVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDK 320

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L     M   G  P+E T    L++CASL    MG   H    + G  L   V  +++D
Sbjct: 321 ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLID 380

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    I +A +   ++      +SW + I G   N +  EA+  F +M+      +  
Sbjct: 381 MYSKCKRIEKALEIFHQI-PDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKP-NSV 438

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T  S L AC+ + +L   ++IH+  +K+    +  + +++++ Y +CG    A   F+ L
Sbjct: 439 TLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-L 497

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV +WN ++  Y+Q G+    + LF++MV   I P + TF+++L ACS SG+V +G 
Sbjct: 498 NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGL 557

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F+ M   Y I P   HY+C+VDLLGRAGKL  A  FI  +PIKP   IW  L  ACR 
Sbjct: 558 EYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRI 617

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  + + E  ++ I + D +    Y+ L N+YA++G   +  + R+ MK + +  +PGCS
Sbjct: 618 HRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCS 677

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKV-------YEKLKQL---MQQIEDIGHTDNEKEDRVL 712
           W+EV  K++ F S +  H +M ++       YEK+K      Q+   +      K D   
Sbjct: 678 WVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFC 737

Query: 713 YHSERLAVGFGLIS 726
            HSER A+ + LI+
Sbjct: 738 GHSERQAIAYSLIN 751



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 253/502 (50%), Gaps = 16/502 (3%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +L++M+ + GD+ +   V  +M   D+ S N L+ GY K   FD+A   + ++    ++P
Sbjct: 74  ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + YT+ ++L  C     +  G+++HA  ++  +     V NAL+TMY+KCG +  A  +F
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  R+ ISW A+I+G+ ++ +  + L L   MRE  IDP+  T T  +++C  L +  
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H+ V++        V  +++ MY  +G   EA+     M +    VSW   I+G 
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGM-ECRDVVSWTTIISGC 312

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N   ++A+E +  M       DE T +S+L AC+ L  L    ++H    ++     V
Sbjct: 313 VDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYV 372

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +SLI+ Y+KC   E A  +F Q+   DV+SW S+I     N R  +A+I F KM+++
Sbjct: 373 VVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILK 432

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY----GILPEEAHYSCMVDLLGRAG 572
             +P + T ++ LSAC+  G +  G+++    +K      G LP     + ++DL  R G
Sbjct: 433 S-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLP-----NAILDLYVRCG 486

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTL 630
           ++  AL    NL  K     W  L           M   + K+++  E++PDD   +++L
Sbjct: 487 RMRTALNQF-NLNEKDVGA-WNILLTGYAQKGKGAMVMELFKRMVESEINPDDVT-FISL 543

Query: 631 SNMYAEAGLQADAEEQRKLMKM 652
               + +G+  +  E  + MK+
Sbjct: 544 LCACSRSGMVTEGLEYFQRMKV 565



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 211/435 (48%), Gaps = 5/435 (1%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKTAVSN 257
            +QA      +  + +      +  ++ +C +     EG+ +    +  L  L    + N
Sbjct: 14  LEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGN 73

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           ALL+M+++ G + +A +VF  + +R++ SW  ++ G+ + G +++ L L   +   GI P
Sbjct: 74  ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           + YTF   L SCA   +   G   HA V++    +   V  A++ MY   G++  A+   
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M  +   +SWNA I+G+F N +  E +E F +M       D  T +S++ AC LL   
Sbjct: 194 DKM-PTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDE 252

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               Q+HS +V++ ++ N+ V +SLI+ Y   G W++AE VFS +   DVVSW ++I   
Sbjct: 253 RLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGC 312

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
             N    KA+  ++ M + G  P   T  +VLSAC+  G +  G K+ E + +  G +  
Sbjct: 313 VDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHE-LAERTGHILY 371

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD-LKMAEFISKQI 616
               + ++D+  +  ++E AL     +P K     W  +    R ++   +   F  K I
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS-WTSVINGLRINNRCFEALIFFRKMI 430

Query: 617 LELDPDDAAVYVTLS 631
           L+  P+   +   LS
Sbjct: 431 LKSKPNSVTLISALS 445



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 199/454 (43%), Gaps = 31/454 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA  LF+K P R  +S + +I              +GY          F +D C   + +
Sbjct: 188 SARMLFDKMPTRDRISWNAMI--------------SGY----------FENDECLEGLEL 223

Query: 107 TCYSLESLLDKQFVI--EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
                E  +D   +    V+S C       LG + H+ + +TA  G+  V  SL+ MY  
Sbjct: 224 FFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLS 283

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
            G  K   +V   M   D+ S   +++G   N L D+A   +  ++     P+  T +++
Sbjct: 284 VGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASV 343

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L+ C SL  +D G +LH    +  ++    V+N+L+ MY KC  +E A  +F  +  ++V
Sbjct: 344 LSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDV 403

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ISWT++ING + +    + L     M      PN  T   AL++CA +     G   HA 
Sbjct: 404 ISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAH 462

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            +K GM    F+  AI+D+Y   G +  A  Q     K     +WN  + G+ +  K   
Sbjct: 463 ALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVG--AWNILLTGYAQKGKGAM 520

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI-VKSKFESNVHVGSSLI 463
            +E F +MV ++   D+ T+ S+L ACS    +    +   R+ V      N+   + ++
Sbjct: 521 VMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVV 580

Query: 464 EAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
           +   + G   +A     ++    D   W +++ A
Sbjct: 581 DLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNA 614


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 203/671 (30%), Positives = 342/671 (50%), Gaps = 54/671 (8%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVV 175
           +  I ++  CS    L   ++ HA + +T +  D +  + L  + A      ++    V 
Sbjct: 32  RHTISLIDRCSS---LRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVF 88

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ----PNHYTYSTMLAICGSL 231
            ++P  +  + N L+  YA     D   S +  LD +  +    PN YT+  ++     +
Sbjct: 89  DEIPQPNSFTWNTLIRAYASGP--DPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV 146

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S++  G+ LH   +K    S   V+N+L+  Y  CG ++ A  VF  + +++V+SW ++I
Sbjct: 147 SSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 206

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           NGF Q G  +K L L   M  + +  +  T    L++CA +R+   G    + + +  + 
Sbjct: 207 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVN 266

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEM-------------GKSASS------------ 386
           +   +  A++DMY+  G I +AK+    M             G + S             
Sbjct: 267 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAM 326

Query: 387 -----VSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATC 440
                V+WNA I+ + +N K  EA+  F ++ ++ +   ++ T  S L AC+ + +L   
Sbjct: 327 PKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG 386

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
             IHS I K+  + N +V S+LI  Y+KCG  E A  VF+ +   DV  W++MI   + +
Sbjct: 387 RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMH 446

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   +A+ +F KM    ++P   TF  V  ACSH+GLV + + +F  M   YGI+PE+ H
Sbjct: 447 GCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKH 506

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y+C+VD+LGR+G LE A+ FI  +PI P+  +W  L  AC+ H++L +AE    ++LEL+
Sbjct: 507 YACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELE 566

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P +   +V LSN+YA++G   +  E RK M++  + KEPGCS IE+   I+ F S + +H
Sbjct: 567 PRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAH 626

Query: 681 SEMPKVYEKLKQLMQQIEDIGH------------TDNEKEDRVLYHSERLAVGFGLISLP 728
               KVY KL ++M++++  G+             +  KE  +  HSE+LA+ +GLIS  
Sbjct: 627 PMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTE 686

Query: 729 AKNKFECSRTL 739
           A       + L
Sbjct: 687 APKAIRVIKNL 697



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 4/188 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++  ++  LS C++   LELGR  H+ I K  +  + +VT++L++MY+KCGD++    V
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREV 424

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +   D+   + ++ G A +    +A   F K+   +V+PN  T++ +   C     +
Sbjct: 425 FNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 484

Query: 235 DEGKQLHAQTMKLQY--LSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           DE + L  + M+  Y  + +      ++ +  + G +E A    E + +  +   W A++
Sbjct: 485 DEAESLFYK-MESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543

Query: 292 NGFKQHGD 299
              K H +
Sbjct: 544 GACKIHAN 551


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 190/593 (32%), Positives = 312/593 (52%), Gaps = 14/593 (2%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY+K    +S   V++  P  ++ S   L++G A+N  F  A   F ++    V PN +T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +        SL     GKQ+HA  +K   +    V  +   MY K  + +DA  +F+ + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RN+ +W A I+     G   + +      R     PN  TF   L +C+   + ++G  
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  V++ G      V   ++D Y    +I  ++    EMG + ++VSW + +A + +N 
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG-TKNAVSWCSLVAAYVQNH 239

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + E+A   + +  ++     +F  SS+L AC+ +  L     IH+  VK+  E  + VGS
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y KCG  ED+E+ F ++   ++V+ NS+I  Y+  G+   A+ LFE+M   G  P
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 521 TNS--TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           T +  TF+++LSACS +G V++G K+F+SM   YGI P   HYSC+VD+LGRAG +E A 
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
            FI  +PI+PT  +W  L  ACR H   ++    ++ + +LDP D+  +V LSN +A AG
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
             A+A   R+ +K   I K  G SWI V N+++ F ++++SH    ++   L +L  ++E
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 539

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             G+            + EK   V +HSE+LA+ FGL+SLP       ++ L 
Sbjct: 540 AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLR 592



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 174/382 (45%), Gaps = 5/382 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++ HAL  K     D FV  S  +MY K         +  ++P  ++ + N  ++    
Sbjct: 77  GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 136

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +    +A   F++   ID  PN  T+   L  C     ++ G QLH   ++  + +  +V
Sbjct: 137 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 196

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N L+  Y KC  +  +E +F  +  +N +SW +++  + Q+ + EK   L    R+D +
Sbjct: 197 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 256

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + +++  +  L++CA +    +G   HA  +K  +    FVG+A+VDMY   G I ++++
Sbjct: 257 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 316

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA--CDEFTYSSILKACSL 433
              EM +  + V+ N+ I G+    + + A+  F +M         +  T+ S+L ACS 
Sbjct: 317 AFDEMPEK-NLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375

Query: 434 LPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-WN 491
             ++    +I   +  +   E      S +++   + G  E A     ++     +S W 
Sbjct: 376 AGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 435

Query: 492 SMIKAYSQNGRARKAIILFEKM 513
           ++  A   +G+ +  ++  E +
Sbjct: 436 ALQNACRMHGKPQLGLLAAENL 457



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 3/271 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L+ CS    L LG + H L+ ++    D  V   L++ Y KC  I+S   +  +M   + 
Sbjct: 166 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 225

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   L+A Y +N   ++A   +L+     V+ + +  S++L+ C  ++ ++ G+ +HA 
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 285

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V +AL+ MY KCG +ED+E  F+ + ++N+++  ++I G+   G  +  
Sbjct: 286 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 345

Query: 304 LRLVCLM--REDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAI 360
           L L   M  R  G  PN  TF   L++C+       G  +F +     G+  G    + I
Sbjct: 346 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 405

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           VDM    G +  A + +K+M    +   W A
Sbjct: 406 VDMLGRAGMVERAYEFIKKMPIQPTISVWGA 436



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 6/181 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LELGR  HA   K  V    FV ++LV+MY KCG I+       +MP  +
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + + N L+ GYA     D A + F ++   G    PN+ T+ ++L+ C    A++ G ++
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 385

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
              +M+  Y  +    +   ++ M  + GM+E A    + + +Q  +  W A+ N  + H
Sbjct: 386 F-DSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMH 444

Query: 298 G 298
           G
Sbjct: 445 G 445


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 204/702 (29%), Positives = 341/702 (48%), Gaps = 85/702 (12%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + + C   +S L+ +    VL  C+  + L  G++ H++I   +V  D+ +   LV+ 
Sbjct: 84  NAMELVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSF 143

Query: 162 YAKCGDIKSMVAVVKQMP----YL------------------------------------ 181
           YA CGD+K    V   M     YL                                    
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPES 203

Query: 182 -----------DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                      D+ S N +++GY  N L ++    + ++  + +  +  T  ++L  C +
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              +  GK +H+  +K  +  +   SN LL MY KCG ++ A  VFE + +RNV+SWT++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ + G  +  + L+  M ++G+  +    T  L +CA   +   G   H  +    M
Sbjct: 324 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           A   FV  A++DMY+  G +  A      M      +SWN  +                 
Sbjct: 384 ASNLFVCNALMDMYAKCGSMEGANSVFSTM-VVKDIISWNTMVG---------------- 426

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
                +   D  T + IL AC+ L +L   ++IH  I+++ + S+ HV ++L++ Y KCG
Sbjct: 427 -----ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
               A  +F  + + D+VSW  MI  Y  +G   +AI  F +M   GI P   +F+++L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSHSGL++ G + F  M  ++ I P+  HY+CMVDLL R G L  A  FI  LPI P A
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 601

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            IW  L   CR + D+++AE +++++ EL+P++   YV L+N+YAEA  + + +  R+ +
Sbjct: 602 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKI 661

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIGH------- 702
             K + K PGCSWIE+  ++  F S  N SH    K+   LK++ +++++ G+       
Sbjct: 662 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 721

Query: 703 ----TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                + +KE  +  HSE+LA+ FGL++LP +     ++ L 
Sbjct: 722 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 183/424 (43%), Gaps = 67/424 (15%)

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           +   V  + A I  F Q GD E  + LVC+ ++  ++   Y   + L  CA L++   G 
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETKTYGSVLQL--CAGLKSLTDGK 119

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK----------------- 382
             H+ +    + + + +G  +V  Y+  G++ E ++    M K                 
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 383 -----------------------SASS----------VSWNAQIAGFFRNQKTEEAIEAF 409
                                  SAS           +SWN+ I+G+  N  TE  +  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM+      D  T  S+L  C+   +L+  + +HS  +KS FE  ++  ++L++ Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  + A RVF ++   +VVSW SMI  Y+++G +  AIIL ++M  EG++       ++L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSIL 359

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI--- 586
            AC+ SG + +G+ V +  +K   +       + ++D+  + G +E A    S + +   
Sbjct: 360 HACARSGSLDNGKDVHD-YIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDI 418

Query: 587 ----------KPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYA 635
                     KP +     +  AC   S L+  + I   IL      D  V   L ++Y 
Sbjct: 419 ISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478

Query: 636 EAGL 639
           + G+
Sbjct: 479 KCGV 482


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 176/558 (31%), Positives = 321/558 (57%), Gaps = 14/558 (2%)

Query: 181 LDIASCNCLLAGYAKNALFDQAF-SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           LD+ + N +L  +  + +  +A  S+   L+     P+ +T+ ++L  C  L     GK 
Sbjct: 41  LDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKV 100

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH Q +K    S   +   LL MY  CG ++ A  +FE +  RN + WT++I+G+ ++  
Sbjct: 101 LHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHC 160

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L L   M EDG  P+E T    +++CA L++  +G   H+ + +  M +   +G+A
Sbjct: 161 PNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAA 418
           +V+MY+  G++  A++   ++       +W+A I G+ +N ++ EA++ F ++   ++  
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLS-DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMR 279

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +E T  +++ AC+ L  L T   +H  I +++   +V + +SLI+ ++KCG  + A+R+
Sbjct: 280 PNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRI 339

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  ++  D++SWNSM+  ++ +G  R+A+  F  M    ++P   TF+ VL+ACSH+GLV
Sbjct: 340 FDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLV 399

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           Q+G+K+F  +   YG+  +  HY CMVDLL RAG L  A  FI  +P++P   IW  +  
Sbjct: 400 QEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLG 459

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR +++L++ E  ++ +L+L+P +  VY+ LSN+YA+  +  + ++ R+LM  K I K 
Sbjct: 460 ACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKT 519

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEK 707
           PGCS + + N  + F + + SH E+ ++   L+Q+ ++++  G+            DN+K
Sbjct: 520 PGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKK 579

Query: 708 EDRVLYHSERLAVGFGLI 725
           E+ V  HSE+LA+ +GL+
Sbjct: 580 EESVSQHSEKLALCYGLL 597



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 8/304 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            ++G+  H  + K  +  D ++  +L+NMYA CGD+KS   + ++M + +      +++G
Sbjct: 95  FKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISG 154

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y KN   ++A   + K++     P+  T +T+++ C  L  +  G +LH+   ++     
Sbjct: 155 YMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKIC 214

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             + +AL+ MY KCG ++ A  VF+ L  ++V +W+A+I G+ ++    + L+   L RE
Sbjct: 215 AVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ---LFRE 271

Query: 313 ----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
                 + PNE T    +++CA L +   G   H  + +        +  +++DM+S  G
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           +I  AK+    M      +SWN+ + GF  +    EA+  F  M   D   DE T+  +L
Sbjct: 332 DIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 429 KACS 432
            ACS
Sbjct: 391 TACS 394



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 155/316 (49%), Gaps = 15/316 (4%)

Query: 90  SFPDGFIDDGCSNTVPVTCYSLES---LLDKQFVIEVLSYCSREECLELGRRYHALITKT 146
           S   G++ + C N   +    +E      D+  +  ++S C+  + L +G + H+ I + 
Sbjct: 150 SMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREM 209

Query: 147 AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF 206
            +     + ++LVNMYAKCGD+K+   V  ++   D+ + + L+ GY KN    +A   F
Sbjct: 210 DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLF 269

Query: 207 LKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
            ++  G +++PN  T   +++ C  L  ++ G+ +H    + Q     +++N+L+ M+ K
Sbjct: 270 REVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSK 329

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           CG ++ A+ +F+ +  +++ISW +++NGF  HG   + L    LM+   + P+E TF   
Sbjct: 330 CGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGV 389

Query: 326 LASCASLRNSHMGY------MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           L +C     SH G       +F+      G+ L       +VD+    G + EA++ ++ 
Sbjct: 390 LTAC-----SHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444

Query: 380 MGKSASSVSWNAQIAG 395
           M        W + +  
Sbjct: 445 MPLQPDGAIWGSMLGA 460



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 92/184 (50%), Gaps = 2/184 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S C++   LE GR  H  IT+T       +  SL++M++KCGDI +   +   M 
Sbjct: 285 ILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMS 344

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           Y D+ S N ++ G+A + L  +A + F  +   D+QP+  T+  +L  C     + EGK+
Sbjct: 345 YKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKK 404

Query: 240 LHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
           L  +   L  +  K+     ++ +  + G++ +A      + +Q +   W +++   + +
Sbjct: 405 LFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVY 464

Query: 298 GDYE 301
            + E
Sbjct: 465 NNLE 468


>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 606

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 306/553 (55%), Gaps = 8/553 (1%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           +T  L+  Y   G  +    +  +MP+ D+ +   ++ GY       +A++ F  +    
Sbjct: 43  LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYIKC-GMMED 271
           V+PN +T S +L  C SL A+  GK +H   +K+    S   V NAL+ MY  C   M++
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV--CLMREDGIDPNEYTFTVALASC 329
           A  VFE +  +N +SWT +I G+    D    LR+     M E  + P  ++F++A+++C
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSP--FSFSIAVSAC 220

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           AS+ +S++G   HA VI  G      V  AI+DMY       EAK+   EM +   +++W
Sbjct: 221 ASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQK-DTITW 279

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N  IAGF     + E++  FSQMV    + + FT++S++ AC+ L  L   +Q+H  I+ 
Sbjct: 280 NTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIH 338

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              ++N+ + ++LI+ Y KCG+  D+ ++FS +   ++VSW SM+  Y  +G  ++A+ L
Sbjct: 339 RGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDL 398

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +MV  GI+P    F+AVLSACSH+GLV +G + F  M   Y + P+   Y+C+VDLL 
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLS 458

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+++ A   I N+P KP   IW  L  AC+ +    + +  + ++LE+ P+ A  YV 
Sbjct: 459 RAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVL 518

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN  A  G  AD    RKLM+  +  KE G SWIE+ N++  F   +   S   +V E 
Sbjct: 519 LSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEV 578

Query: 690 LKQLMQQIEDIGH 702
           L+ L++ ++D G+
Sbjct: 579 LELLIRHMKDAGY 591



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 170/323 (52%), Gaps = 3/323 (0%)

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
           T ++  L+  Y   G  E+A ++F+ +  R+VI+WT++I G+     + +   +   M  
Sbjct: 41  TGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLR 100

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIW 371
           DG+ PN +T +  L +C SL+    G + H   IK G      +V  A++DMY+   +  
Sbjct: 101 DGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSM 160

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +  + + E   + ++VSW   I G+   +     +  F QM   +     F++S  + AC
Sbjct: 161 DNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSAC 220

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + + S    +Q+H+ ++   FESN+ V +++++ Y +C    +A+++F ++T  D ++WN
Sbjct: 221 ASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWN 280

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I  + +   + +++ +F +MV EG  P   TF +V++AC++  ++  GQ++   ++  
Sbjct: 281 TLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339

Query: 552 YGILPEEAHYSCMVDLLGRAGKL 574
            G+       + ++D+  + G +
Sbjct: 340 -GLDNNLELSNALIDMYAKCGNV 361



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 4/274 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +S C+      LG++ HA +       +  V  ++++MY +C        +  +M   D 
Sbjct: 217 VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDT 276

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N L+AG+     + ++   F ++      PN +T+++++A C +L+ +  G+QLH  
Sbjct: 277 ITWNTLIAGFETLDSY-ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGG 335

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +     +   +SNAL+ MY KCG + D+  +F G+   N++SWT+++ G+  HG  ++ 
Sbjct: 336 IIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEA 395

Query: 304 LRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L   M   GI P++  F   L++C  A L +  + Y F        +A    +   +V
Sbjct: 396 VDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRY-FRLMTSYYNVAPDRDIYACVV 454

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           D+ S  G + EA + ++ M        W A +  
Sbjct: 455 DLLSRAGRVKEAYELIENMPFKPDESIWVALLGA 488



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/183 (19%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    L  G++ H  I    +  +  ++ +L++MYAKCG++     +   M + +
Sbjct: 316 VIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTN 375

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLH 241
           + S   ++ GY  +    +A   F ++ G  ++P+   +  +L+ C     +DEG +   
Sbjct: 376 LVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFR 435

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
             T          +   ++ +  + G +++A  + E +  + +   W A++   K+   Y
Sbjct: 436 LMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKK---Y 492

Query: 301 EKP 303
           ++P
Sbjct: 493 KQP 495


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 181/566 (31%), Positives = 312/566 (55%), Gaps = 4/566 (0%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ELG +  +   +  +  + F  ++L+++YAKCG +     V   MP  +I S N ++AGY
Sbjct: 108 ELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGY 167

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             +    +A   FL++  +   P+  T++ +LA           +QLH + +K       
Sbjct: 168 TDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGL 227

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMRE 312
              NA +T Y +C  + D+  +F+G+  R++ISW +++  +  HG  ++ +R  V +MRE
Sbjct: 228 VALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRE 287

Query: 313 DGIDPNEYTFTVALASCASLR-NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-- 369
            GI P+ Y+FT A++ C+    +   G   H+ VIK G+     V  A++ MY+   +  
Sbjct: 288 SGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNC 347

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + E             +VSWN+ + G+  +  + +A++ F  M   +   DEF  S+ L+
Sbjct: 348 MMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALR 407

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +CS L  L    Q+HS +V+S F SN  V SSLI  Y+KCG   DA + F +   +  V 
Sbjct: 408 SCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVP 467

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WNSM+  Y+Q+G+A+    LF +M+   +   + TF+A+++A SH GLV +G ++  +M 
Sbjct: 468 WNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTME 527

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             Y I     HY+C VDL GRAG+L+ A   I ++P +P A +W  L  ACR H ++++A
Sbjct: 528 TRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELA 587

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             +++ +   +P   + YV LS+MY+  G+ +D    +K+M+ + +SK PG SWIEV N+
Sbjct: 588 SDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNE 647

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQ 695
           ++ F + ++SH  M ++++ L+ L+Q
Sbjct: 648 VHSFNADDRSHPRMVEIFDMLRMLLQ 673



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 225/506 (44%), Gaps = 18/506 (3%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+  Y+  G + +   V  ++P+ D AS N LLA +        A+     +    +  +
Sbjct: 32  LLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAAS 90

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +   + L    +    + G QL + +++         ++ALL +Y KCG + DA  VF+
Sbjct: 91  TFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFD 150

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
           G+  RN++SW AII G+       + + L   M+  G  P+  TF V LA+ A  R   +
Sbjct: 151 GMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSL 210

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
               H +++K G ALG     A +  YS    + +++K    + +S   +SWN+ +  + 
Sbjct: 211 MRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGI-ESRDLISWNSMLGAYA 269

Query: 398 RNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQ-----IHSRIVKSK 451
            +   +EA+  F +M+R      D ++++S +  C    S   C+      IHS ++K  
Sbjct: 270 YHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVC----SEHGCDDQQGRSIHSLVIKFG 325

Query: 452 FESNVHVGSSLIEAYNKCGS---WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
            E    V +++I  Y +       EDA   FS L   D VSWNSM+  YS +G +  A+ 
Sbjct: 326 LEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALK 385

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            F  M  E IR       A L +CS   +++ G++V  S+V + G    +   S ++ + 
Sbjct: 386 FFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQV-HSLVVQSGFASNDFVSSSLIFMY 444

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVY 627
            + G L  A           + P W  +      H   +    +  ++L+L+ P D   +
Sbjct: 445 SKCGVLGDARKSFEEADKSSSVP-WNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTF 503

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMK 653
           V L   Y+  GL  +  E    M+ +
Sbjct: 504 VALITAYSHGGLVDEGSEILNTMETR 529



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 5/198 (2%)

Query: 108 CYSLESLLDKQFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           C   E++   +F +   L  CS    L LGR+ H+L+ ++    + FV++SL+ MY+KCG
Sbjct: 389 CMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCG 448

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +       ++         N ++ GYA++         F ++  ++V  +H T+  ++ 
Sbjct: 449 VLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALIT 508

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL--LTMYIKCGMMEDAESVFEGL-VQRN 283
                  +DEG ++   TM+ +Y     + +    + +Y + G ++ A+ + E +  Q +
Sbjct: 509 AYSHGGLVDEGSEI-LNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPD 567

Query: 284 VISWTAIINGFKQHGDYE 301
            I W  ++   + HG+ E
Sbjct: 568 AIVWMTLLGACRIHGNME 585


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 207/629 (32%), Positives = 341/629 (54%), Gaps = 33/629 (5%)

Query: 121 IEVLSYCSREECLELGR--------RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           I VL  CS+ + LE+ +        R H  +  ++     F TA LVN Y  CGD++   
Sbjct: 205 IGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSS-----FATA-LVNFYGSCGDLEQAF 258

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGS 230
               +   L++     ++  Y +   +D+A   F  + L+G  V+ +      +L  C  
Sbjct: 259 RAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEG--VKLDRIACMAVLNACSG 315

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              ++EG+ +H    ++++       NAL+ MY KCG +E+A  VF  +  R+VISW  I
Sbjct: 316 PRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTI 375

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I    QH  + + L L+ LM+ DG+  ++ +F  AL  CA+      G M H+ +++ G+
Sbjct: 376 IAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGI 435

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK-TEEAIEAF 409
                +  AI+DMY       +A +  + M K    VSWNA I  +    + + EA+  F
Sbjct: 436 KADVMLDNAILDMYGSCKSTDDASRVFRAM-KVRDQVSWNAMITAYAAQPRLSSEALLLF 494

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM  +    D  ++ + L AC+   SLA  + +H RI ++  ESN+ V ++++  Y K 
Sbjct: 495 QQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKS 554

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G+   A ++F ++   DV+SWN MI A++Q+G A + +  F +M  EG  P + TF++V+
Sbjct: 555 GTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVV 614

Query: 530 SACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           SACSH GLV+DG ++F S++ ++  I P   HY CMVDL+ RAGKL+ A  FI+  P+KP
Sbjct: 615 SACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKP 674

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              I   +  A + H D++ A   ++ ++EL PD +A YV LSN+Y E G + +  + R+
Sbjct: 675 DRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGKKDEGAKIRR 734

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----- 703
           LM  K I KEP  S I V  +++ FF+ + +++  P++ E+L++L  ++   G+T     
Sbjct: 735 LMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLEMAKAGYTPDTTL 794

Query: 704 ------DNEKEDRVLYHSERLAVGFGLIS 726
                 D +K+  + YHSE+LA+ FGLIS
Sbjct: 795 MLHDVGDEQKKRLLSYHSEKLAIAFGLIS 823



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 217/451 (48%), Gaps = 6/451 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++L   +    L+LG+  HA I K+A+    F+   LV MY  CG +    A   +MP  
Sbjct: 3   DLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQ 62

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS-LSAIDEGKQL 240
           D  +   L+  + +    +QA   F  +    V P +  +  +L  C +    ++EG+++
Sbjct: 63  DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRI 122

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H         S   VS  LL MY KC  +EDA  VF+G+  + V+ W A+I  + Q   +
Sbjct: 123 HGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHH 182

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-ALGD-FVGT 358
           E+ +++   M  +G+     TF   L +C+ L++  +  +    V +R    L D    T
Sbjct: 183 EQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFAT 242

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V+ Y   G++ +A +           +   A I  + + ++ +EA+E F  M+     
Sbjct: 243 ALVNFYGSCGDLEQAFRAFSR--HRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D     ++L ACS    L     IH  + + +F+ +V+ G++LI  Y KCGS E+A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F  +   DV+SWN++I A+ Q+ +  +A+ L   M ++G++    +F+  L  C+ S  +
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
             G ++  S + E GI  +    + ++D+ G
Sbjct: 421 AKG-RMIHSWIVESGIKADVMLDNAILDMYG 450



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 258/536 (48%), Gaps = 14/536 (2%)

Query: 115 LDKQFVIEVLSYCSRE-ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +++ FV  VL  CS + E LE GRR H ++  TA+  D +V+ +L++MY KC  ++    
Sbjct: 98  VNRNFV-AVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARK 156

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   + +  +   N ++  YA+    +QA   F  +    V+    T+  +L  C  L  
Sbjct: 157 VFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKD 216

Query: 234 IDEGK--QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           ++  K  +L  +  +  +L  ++ + AL+  Y  CG +E A   F    +  +I  TA+I
Sbjct: 217 LEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRH-RLELILATAMI 275

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             + Q   +++ L L  +M  +G+  +       L +C+  R    G + H     R + 
Sbjct: 276 TQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHG--FMREIR 333

Query: 352 LGDFV--GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
               V  G A+++MY   G + EA +  + M +    +SWN  IA   ++ +  EA+   
Sbjct: 334 FDRHVNAGNALINMYGKCGSLEEAVEVFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLL 392

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M  +    D+ ++ + L  C+   +LA    IHS IV+S  +++V + +++++ Y  C
Sbjct: 393 HLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSC 452

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR-ARKAIILFEKMVVEGIRPTNSTFLAV 528
            S +DA RVF  +   D VSWN+MI AY+   R + +A++LF++M + G  P   +F+A 
Sbjct: 453 KSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAA 512

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSAC+    + +G K+    ++E G+       + ++++  ++G L +A      +P+ P
Sbjct: 513 LSACAAQASLAEG-KLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPL-P 570

Query: 589 TAPIWRPLFAACRCHSDL-KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
               W  + +A   H    ++  F  +   E    +   +V++ +  +  GL  D 
Sbjct: 571 DVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDG 626



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 183/388 (47%), Gaps = 9/388 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+ +L +     ++D GK++HA+  K        + + L+ MY+ CG + DA++ F+ + 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC-ASLRNSHMGY 339
            ++ ++W  +I    Q GD E+ L L   M+ +G+ P    F   L +C A       G 
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +    M    +V T ++ MY     + +A+K    + +    V WNA I  + + 
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGI-RHKRVVEWNAMITAYAQQ 179

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH-- 457
              E+AI+ F  M+      +  T+  +L ACS L  L   + +    V+ +   ++H  
Sbjct: 180 DHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHDHLHDS 238

Query: 458 -VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
              ++L+  Y  CG  E A R FS+    +++   +MI  Y+Q  R  +A+ LF+ M++E
Sbjct: 239 SFATALVNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLE 297

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G++      +AVL+ACS    +++G ++    ++E          + ++++ G+ G LE 
Sbjct: 298 GVKLDRIACMAVLNACSGPRGLEEG-RIIHGFMREIRFDRHVNAGNALINMYGKCGSLEE 356

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHS 604
           A+    ++  +     W  + AA   HS
Sbjct: 357 AVEVFRSMQHRDVIS-WNTIIAAHGQHS 383



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 12/238 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   +  L  C+  E L  GR  H+ I ++ +  D  +  ++++MY  C        V 
Sbjct: 403 DKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVF 462

Query: 176 KQMPYLDIASCNCLLAGYAKNA-LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           + M   D  S N ++  YA    L  +A   F ++      P+  ++   L+ C + +++
Sbjct: 463 RAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASL 522

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            EGK LH +  +    S   V+NA+L MY K G +  A  +F  +   +VISW  +I+ F
Sbjct: 523 AEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAF 582

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            QHG  ++ LR    M  +G  PN+ TF   +++C+           H  ++K G+ L
Sbjct: 583 AQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQL 629


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 189/557 (33%), Positives = 293/557 (52%), Gaps = 4/557 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+    +  GR  H  + K     D FV  +L++ Y  CG ++    V  +MP  D
Sbjct: 47  VLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKD 106

Query: 183 IASCNCLLAGYAKNAL-FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S N ++  ++ N   +  A   F  +    ++PN  T S+ L +   L     G+++H
Sbjct: 107 LVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVH 166

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             ++++   S   ++N+L+ MY K G   +A +VF  L  +NV+SW A+I  F Q+    
Sbjct: 167 GSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFEL 226

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             + LV  M++ G  PN  TFT  L +CA +     G   HA+ I  G A   FV  A+ 
Sbjct: 227 VAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALT 286

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DMY+  G +  A+       +    VS+N  I G  +     E++  FS+M       D 
Sbjct: 287 DMYAKSGHLKLARNVFDTSLRD--EVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDN 344

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            ++   L AC+ L ++   ++IH  +++  F  ++ V +SL++ Y KCG    A  +F +
Sbjct: 345 VSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +T  DV SWN+MI  Y   G    AI LFE M  + +   + +F+AVLSACSH GL++ G
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +K F+ + K  GI P + HY+CMVDLLGRAG +E A   I  LPI P A IW  L  ACR
Sbjct: 465 RKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            + +L++A + ++ + EL P+ +  Y  LSNMYAE G   +A   R+LMK + + K PGC
Sbjct: 524 IYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGC 583

Query: 662 SWIEVYNKIYRFFSQNK 678
           SW+++  + + F    K
Sbjct: 584 SWVQIGEQAHAFVVGEK 600



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 187/366 (51%), Gaps = 4/366 (1%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N L+ GY+   +       + ++  I V+P+ +T+  +L  C     + +G+++H   +K
Sbjct: 11  NTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVK 69

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG-DYEKPLR 305
           L + S   V N LL+ Y  CG + DA  VF+ + +++++SW  +I  F  +G  Y   L 
Sbjct: 70  LGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALD 129

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           +  LM ++G+ PN  T +  L     L     G   H   I+ G+    F+  +++DMY+
Sbjct: 130 MFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYA 189

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G   EA     ++  + + VSWNA IA F +N+    A+    QM       +  T++
Sbjct: 190 KSGHSTEASNVFYKL-DAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           ++L AC+ +  +   ++IH+R +      ++ V ++L + Y K G  + A  VF   +  
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLR 307

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D VS+N +I  +SQ     +++ LF +M + G++  N +F+  LSAC++   ++ G+++ 
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIH 367

Query: 546 ESMVKE 551
             ++++
Sbjct: 368 GFLLRK 373



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 3/194 (1%)

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M    ++  WN  I G+         +E ++QMVR     D+ T+  +LKAC+    +  
Sbjct: 1   MHHRTTAFLWNTLIRGY-SIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             ++H  +VK  FES+V VG++L+  Y  CG   DA RVF ++   D+VSWN+MI  +S 
Sbjct: 60  GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119

Query: 500 NG-RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           NG   R A+ +F  M+ EG++P + T  + L         + G++V  S ++  G+  + 
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIR-MGLESDI 178

Query: 559 AHYSCMVDLLGRAG 572
              + ++D+  ++G
Sbjct: 179 FIANSLIDMYAKSG 192


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 313/565 (55%), Gaps = 1/565 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C+      LG + H L+  +    D  V  +LV MY+KCG++     +   MP  D
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L+AGY +N   D+A   F  +    V+P+  T+++ L       ++   K++H+
Sbjct: 312 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 371

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++ +      + +AL+ +Y K G +E A  +F+     +V   TA+I+G+  HG    
Sbjct: 372 YIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNID 431

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +     + ++G+ PN  T    L +CA+L    +G   H  ++K+ +     VG+AI D
Sbjct: 432 AINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITD 491

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G +  A +  + M ++  S+ WN+ I+ F +N K E A++ F QM  + A  D  
Sbjct: 492 MYAKCGRLDLAYEFFRRMSET-DSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSV 550

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           + SS L + + LP+L   +++H  ++++ F S+  V S+LI+ Y+KCG    A  VF+ +
Sbjct: 551 SLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLM 610

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + VSWNS+I AY  +G AR+ + LF +M+  G+ P + TFL ++SAC H+GLV +G 
Sbjct: 611 AGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGI 670

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M +EYGI     HY+CMVDL GRAG+L  A   I ++P  P A +W  L  ACR 
Sbjct: 671 HYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRL 730

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++A+  S+ +LELDP ++  YV LSN++A+AG      + R+LMK K + K PG S
Sbjct: 731 HGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYS 790

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVY 687
           WI+V    + F +   +H E  ++Y
Sbjct: 791 WIDVNGGTHMFSAAEGNHPESVEIY 815



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 223/459 (48%), Gaps = 4/459 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS    ++  R+ H  I    +     +++ ++ +Y  CG I     +   +   +    
Sbjct: 54  CSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPW 113

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ G      FD A  F+ K+ G +V P+ YT+  ++  CG L+ +     +H     
Sbjct: 114 NWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARS 173

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           L +     V +AL+ +Y   G + DA  VF+ L QR+ I W  +++G+ + GD+   +  
Sbjct: 174 LGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGT 233

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
            C MR      N  T+T  L+ CA+     +G   H  VI  G      V   +V MYS 
Sbjct: 234 FCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSK 293

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +++A+K    M ++  +V+WN  IAG+ +N  T+EA   F+ M+      D  T++S
Sbjct: 294 CGNLFDARKLFNTMPQT-DTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFAS 352

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            L +     SL  C+++HS IV+ +   +V++ S+LI+ Y K G  E A ++F Q T  D
Sbjct: 353 FLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVD 412

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           V    +MI  Y  +G    AI  F  ++ EG+ P + T  +VL AC+    ++ G+++  
Sbjct: 413 VAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHC 472

Query: 547 SMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNL 584
            ++K+   L    +  S + D+  + G+L++A  F   +
Sbjct: 473 DILKKQ--LENIVNVGSAITDMYAKCGRLDLAYEFFRRM 509



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 179/356 (50%), Gaps = 4/356 (1%)

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           ++   C   S + + +Q+H Q +        A+S+ +L +Y+ CG + D  ++F GL   
Sbjct: 49  SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELC 108

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           N + W  +I G    G ++  L     M    + P++YTF   + +C  L N  +  + H
Sbjct: 109 NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
                 G  +  FVG+A++ +Y+  G I +A++   E+ +   ++ WN  + G+ ++   
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQR-DTILWNVMLHGYVKSGDF 227

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
             A+  F  M  + +  +  TY+ IL  C+         Q+H  ++ S FE +  V ++L
Sbjct: 228 NNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTL 287

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y+KCG+  DA ++F+ +   D V+WN +I  Y QNG   +A  LF  M+  G++P +
Sbjct: 288 VAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 347

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIA 577
            TF + L +   SG ++  ++V   +V+    +P + +  S ++D+  + G +E+A
Sbjct: 348 VTFASFLPSILESGSLRHCKEVHSYIVRHR--VPFDVYLKSALIDIYFKGGDVEMA 401


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 316/570 (55%), Gaps = 23/570 (4%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N L+A  A+     ++   F  +  +D++PN  T+   +  C +L  ++ GKQ H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q +   + S   VS+AL+ MY KCG + +A  +F+ + +RN+++WT++I G+ Q+ D  
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165

Query: 302 KPLRLVCLM---------REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           + L +              E G   +       L++C+ + N  +    H   IK G+  
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V   ++D Y+  GE+  ++K   +M +    VSWN+ IA + +N  + +A E F  M
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEK-DVVSWNSMIAVYAQNGLSTDAFEVFHGM 284

Query: 413 VR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           ++      +E T S++L AC+   +L     +H +++K  + +NV + +S+I+ Y KCG 
Sbjct: 285 LKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQ 344

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            E A   F  +   +V SW +MI  Y  +G AR+A+ +F +M+  G++P   TF++VL+A
Sbjct: 345 AEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAA 404

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH+G +++G + F +M  EY + P   HY CMVDLLGRAG ++ A   I ++ ++    
Sbjct: 405 CSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFV 464

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L AACR H D+++AE  ++++ +LDP +   YV L+N+YA+AG   D E  R L+K
Sbjct: 465 LWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVK 524

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN------ 705
            + + K PG S +E+  +++ F   +K H +  K+Y+ L++L  ++++ G+  N      
Sbjct: 525 DRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLH 584

Query: 706 -----EKEDRVLYHSERLAVGFGLI-SLPA 729
                EKE  V  HSE+LAV FG++ S+P 
Sbjct: 585 DVDEEEKEMIVRVHSEKLAVAFGVMNSIPG 614



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 16/289 (5%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D   +I VLS CSR     +    H +  K  +     V  +L++ YAKCG++     V
Sbjct: 190 VDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKV 249

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF---LKLDGIDVQPNHYTYSTMLAICGSL 231
              M   D+ S N ++A YA+N L   AF  F   LK  G   + N  T ST+L  C   
Sbjct: 250 FDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGG--GKYNEVTLSTLLLACAHE 307

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            A+  G  LH Q +K+ Y++   ++ +++ MY KCG  E A + F+G+ ++NV SWTA+I
Sbjct: 308 GALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMI 367

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQV 345
            G+  HG   + L +   M   G+ PN  TF   LA+C     SH G++      F+A  
Sbjct: 368 AGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAAC-----SHAGFLEEGWRWFNAMS 422

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +  +  G      +VD+    G I EA   +K M      V W + +A
Sbjct: 423 HEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLA 471



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 209/464 (45%), Gaps = 33/464 (7%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           CS    L  G++ H          D FV+++L++MY+KCG + +   +  ++P  +I + 
Sbjct: 92  CSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151

Query: 187 NCLLAGYAKNALFDQAFSFFLKL---------DGIDVQPNHYTYSTMLAICGSLS--AID 235
             L+ GY +N    +A   F +          + +    +     ++L+ C  +S  A+ 
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG  +H   +K+       V N LL  Y KCG +  +  VF+ + +++V+SW ++I  + 
Sbjct: 212 EG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYA 269

Query: 296 QHGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q+G       +   +++  G   NE T +  L +CA      +G   H QVIK G     
Sbjct: 270 QNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNV 329

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            + T+I+DMY   G+   A+     M K  +  SW A IAG+  +    EA++ F QM+ 
Sbjct: 330 IMATSIIDMYCKCGQAEMARNAFDGM-KEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG----SSLIEAYNKCG 470
                +  T+ S+L ACS    L   E+          E NV  G      +++   + G
Sbjct: 389 AGVKPNYITFISVLAACSHAGFL---EEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAG 445

Query: 471 SWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIRPTNSTFLA 527
             ++A  +   +    D V W S++ A     R  K + L E    E   + P+N  +  
Sbjct: 446 YIKEAYNLIKSMKVRRDFVLWGSLLAAC----RIHKDVELAEISARELFKLDPSNCGYYV 501

Query: 528 VLSAC-SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +L+   + +G  +D +++   +VK+ G++    +   +V+L GR
Sbjct: 502 LLANIYADAGRWKDVERM-RILVKDRGLVKPPGY--SLVELKGR 542



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 18/252 (7%)

Query: 80  SRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRY 139
           ++NG ST       G +  G      VT  +L            L  C+ E  L +G   
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTL------------LLACAHEGALRVGMCL 316

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H  + K     +  +  S+++MY KCG  +        M   ++ S   ++AGY  +   
Sbjct: 317 HDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFA 376

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN-- 257
            +A   F ++    V+PN+ T+ ++LA C     ++EG +     M  +Y  +  V +  
Sbjct: 377 REALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWF-NAMSHEYNVEPGVEHYG 435

Query: 258 ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            ++ +  + G +++A ++ + + V+R+ + W +++   + H D E  L  +       +D
Sbjct: 436 CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVE--LAEISARELFKLD 493

Query: 317 PNEYTFTVALAS 328
           P+   + V LA+
Sbjct: 494 PSNCGYYVLLAN 505


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 187/591 (31%), Positives = 314/591 (53%), Gaps = 51/591 (8%)

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y  + L  Q+   F+ +    + P+H  + ++L  C  L  ++ G+ LH   +++     
Sbjct: 81  YTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFD 140

Query: 253 TAVSNALLTMYIKCGMMEDA--------------------------------ESVFEGLV 280
               NAL+ MY K   +E++                                  +FE + 
Sbjct: 141 LYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMP 200

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +++++SW  II G  ++G YE+ LR++  M    + P+ +T +  L   A   +   G  
Sbjct: 201 EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKE 260

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   I++G+    +V ++++DMY+    + ++ +    + +    +SWN+ IAG  +N 
Sbjct: 261 IHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTER-DGISWNSIIAGCVQNG 319

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +E +  F QM+        +++SSI+ AC+ L +L   +Q+H  I ++ F+ N+ + S
Sbjct: 320 LFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 379

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL++ Y KCG+   A+++F ++   D+VSW +MI   + +G+A  AI LFE+M  EGI+ 
Sbjct: 380 SLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK- 438

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
                 AVL+ACSH GLV +  K F SM +++GI P   HY+ + DLLGRAG+LE A  F
Sbjct: 439 ------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDF 492

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  + I PT  IW  L +ACR H ++ MAE ++ +ILE+DP++   Y+ L+N+Y+ A   
Sbjct: 493 ICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRW 552

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            +A + R  M+   I K P CSWIEV NK+Y F + ++SH    K+ E ++ L++ +E  
Sbjct: 553 KEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKE 612

Query: 701 G--------HTDNEKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           G        H D E+E +   V  HSERLA+ FG+I+ PA      ++ L 
Sbjct: 613 GYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGMTIRVTKNLR 663



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 34/405 (8%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+ +  + +QLHAQ +K Q  S     + LL++Y    ++ D+  +F  +     ++W +
Sbjct: 18  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I  +  HG   + L     M   G+ P+   F   L SCA L + ++G   H  +I+ G
Sbjct: 77  VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136

Query: 350 MALGDFVGTAIVDMYS-------------GLGEIW------------------EAKKQLK 378
           +    + G A+++MYS             G GE++                  ++ +++ 
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           EM      VSWN  IAG  RN   EE +    +M   +   D FT SS+L   +    ++
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             ++IH   ++   +++++V SSLI+ Y KC    D+ RVF+ LT  D +SWNS+I    
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           QNG   + +  F +M++  I+P + +F +++ AC+H   +  G+++    +   G     
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQL-HGYITRNGFDENI 375

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
              S +VD+  + G +  A      + ++     W  +   C  H
Sbjct: 376 FIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVS-WTAMIMGCALH 419



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 163/349 (46%), Gaps = 40/349 (11%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK----------- 164
           D      VL  C+    L LG   H  I +  +  D +   +L+NMY+K           
Sbjct: 105 DHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQR 164

Query: 165 --CGDI-------------------KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF 203
              G++                    S+  + + MP  D+ S N ++AG A+N L+++  
Sbjct: 165 LGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETL 224

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
               ++ G +++P+ +T S++L +      I  GK++H  +++    +   V+++L+ MY
Sbjct: 225 RMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMY 284

Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
            KC  + D+  VF  L +R+ ISW +II G  Q+G +++ LR    M    I P  Y+F+
Sbjct: 285 AKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFS 344

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             + +CA L   H+G   H  + + G     F+ +++VDMY+  G I  AK+    M + 
Sbjct: 345 SIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRM-RL 403

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
              VSW A I G   + +  +AIE F QM       +     ++L ACS
Sbjct: 404 RDMVSWTAMIMGCALHGQAPDAIELFEQM-------ETEGIKAVLTACS 445



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 18/244 (7%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    +  +  D +V +SL++MYAKC  +     V   +   D  S N ++AG  +
Sbjct: 258 GKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQ 317

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N LFD+   FF ++    ++P  Y++S+++  C  L+ +  GKQLH    +  +     +
Sbjct: 318 NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFI 377

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +++L+ MY KCG +  A+ +F+ +  R+++SWTA+I G   HG     + L   M  +GI
Sbjct: 378 ASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437

Query: 316 DPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
                     L +C     SH G +      F++     G+A G     A+ D+    G 
Sbjct: 438 K-------AVLTAC-----SHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGR 485

Query: 370 IWEA 373
           + EA
Sbjct: 486 LEEA 489


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 204/653 (31%), Positives = 327/653 (50%), Gaps = 51/653 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVVKQM 178
           + ++  CS  + L   ++ HA + +T +  D F  + L+   A      +     V  Q+
Sbjct: 39  LSLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P+ ++ + N L+  YA ++   Q+   FL++     D  P+ +T+  ++     L  +  
Sbjct: 96  PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDF-PDKFTFPFLIKAASELEELFT 154

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK  H   +K+   S   + N+L+  Y KCG +     VF  + +R+V+SW ++I  F Q
Sbjct: 155 GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQ 214

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G  E+ L L   M    + PN  T    L++CA   +   G   H+ + +  +     +
Sbjct: 215 GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTL 274

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGK--------------------SASSV--------- 387
             A++DMY+  G + +AK+   +M +                    +A  +         
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334

Query: 388 -SWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            +WNA I+ + +  K +EA+E F ++ +   A  DE T  S L AC+ L ++     IH 
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I K   + N H+ +SLI+ Y KCG  + A  VF  +   DV  W++MI   + +G  + 
Sbjct: 395 YIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKD 454

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           AI LF KM  + ++P   TF  +L ACSH GLV++G+  F  M   YG+LP   HY+CMV
Sbjct: 455 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 514

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           D+LGRAG LE A+  I  +P+ P A +W  L  AC  H ++ +AE    Q++EL+P +  
Sbjct: 515 DILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHG 574

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            YV LSN+YA+AG        RKLM+   + KEPGCS IEV   ++ F   + SH    K
Sbjct: 575 AYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKK 634

Query: 686 VYEKLKQLMQQIEDIGHTDNE------------KEDRVLYHSERLAVGFGLIS 726
           +Y KL +++ ++E IG+  N+            KE  +  HSE+LA+ FGLIS
Sbjct: 635 IYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLIS 687



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 148/327 (45%), Gaps = 33/327 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VLS C+++   E GR  H+ I +  +     ++ ++++MY KCG ++    +  +MP
Sbjct: 240 MVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMP 299

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV------------------------- 214
             DI S   +L GYAK   +D A   F  +   D+                         
Sbjct: 300 EKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHE 359

Query: 215 -------QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
                  +P+  T  + L+ C  L A+D G  +H    K        ++ +L+ MY KCG
Sbjct: 360 LQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCG 419

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            ++ A  VF  + +++V  W+A+I G   HG  +  + L   M+ED + PN  TFT  L 
Sbjct: 420 DLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILC 479

Query: 328 SCASLRNSHMGYMFHAQV-IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           +C+ +     G  F  Q+ +  G+  G      +VD+    G + EA + +++M  + ++
Sbjct: 480 ACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAA 539

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             W A +     ++    A +A SQ++
Sbjct: 540 SVWGALLGACTIHENVVLAEQACSQLI 566



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 4/185 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++  LS C++   ++LG   H  I K  +  +  +T SL++MY KCGD++  + V 
Sbjct: 369 DEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF 428

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+   + ++AG A +     A + F K+    V+PN  T++ +L  C  +  ++
Sbjct: 429 HSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVE 488

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIIN 292
           EG+    Q M+L Y     V +   ++ +  + G++E+A  + E +      S W A++ 
Sbjct: 489 EGRTFFNQ-MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLG 547

Query: 293 GFKQH 297
               H
Sbjct: 548 ACTIH 552


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 201/663 (30%), Positives = 334/663 (50%), Gaps = 62/663 (9%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIK---SMVAVVKQMPYLDIASCNCLLAGYAKN 196
           HA ++++    + FV  ++V+MY KCG ++   +M   +      D+ S N +++ Y   
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341

Query: 197 ALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +  + A + F K+    +  P+  +   +L  C SL+A   G+Q+H  +++   +    V
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NA++ MY KCG ME+A  VF+ +  ++V+SW A++ G+ Q G  E  L L   M E+ I
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 316 D-----------------------------------PNEYTFTVALASCASLRNSHMGYM 340
           +                                   PN  T    L++C S+     G  
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521

Query: 341 FHAQVIKRGMALG-------DF-VGTAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNA 391
            H   IK  + L        D  V   ++DMY+       A+K    +  K    V+W  
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVK 449
            I G+ ++     A++ FS M + D +   ++FT S  L AC+ L +L    Q+H+ +++
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641

Query: 450 SKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           + + S  + V + LI+ Y+K G  + A+ VF  +   + VSW S++  Y  +GR   A+ 
Sbjct: 642 NFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALR 701

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +F++M    + P   TFL VL ACSHSG+V  G   F  M K++G+ P   HY+CMVDL 
Sbjct: 702 VFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLW 761

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG+L  A+  I+ +P++PT  +W  L +ACR HS++++ EF + ++LEL+  +   Y 
Sbjct: 762 GRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYT 821

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            LSN+YA A    D    R  MK   I K PGCSWI+    +  F+  ++SH +  ++YE
Sbjct: 822 LLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYE 881

Query: 689 KLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
            L  L+Q+I+ IG+            D EK D +  HSE+LA+ +G+++L  +     ++
Sbjct: 882 TLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIRITK 941

Query: 738 TLE 740
            L 
Sbjct: 942 NLR 944



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 148/596 (24%), Positives = 261/596 (43%), Gaps = 70/596 (11%)

Query: 100 CSNTVPVTCYSLES-LLDKQFVIEVLSYCSR------EECLELGRRYHA--LITKTAVCG 150
           CS ++ + C+ ++S LL  QF    L  C+       +EC  L    HA  L  ++ + G
Sbjct: 132 CSISMLLRCFPIKSKLLQSQFTNTRLLSCATIPITALKECNSLA---HAKLLHQQSIMQG 188

Query: 151 DQFVTAS-LVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFL 207
             F  A+ L+  Y         + +++++P     +   N L+            F+ + 
Sbjct: 189 LLFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYR 248

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           ++  +   P+HYT+  +   C +LS++  G  LHA   +  + S   V NA+++MY KCG
Sbjct: 249 QMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCG 308

Query: 268 MMEDAESVFEGLVQRNV---ISWTAIINGFKQHGDYEKPLRLVCLMREDGI-DPNEYTFT 323
            +  A ++F+ L  R +   +SW ++++ +    D    L L   M    +  P+  +  
Sbjct: 309 ALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLV 368

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             L +CASL  S  G   H   I+ G+    FVG A+VDMY+  G++ EA K  + M K 
Sbjct: 369 NILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM-KF 427

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS------------------ 425
              VSWNA + G+ +  + E A+  F +M   +   D  T++                  
Sbjct: 428 KDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDV 487

Query: 426 -----------------SILKACSLLPSLATCEQIHSRIVKSKFE--------SNVHVGS 460
                            S+L AC  + +L   ++ H   +K             ++ V +
Sbjct: 488 FRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVIN 547

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAIILFEKM--VVE 516
            LI+ Y KC S E A ++F  ++    DVV+W  MI  Y+Q+G A  A+ LF  M  + +
Sbjct: 548 GLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDK 607

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            I+P + T    L AC+    ++ G++V   +++ +         +C++D+  ++G ++ 
Sbjct: 608 SIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDT 667

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDAAVYVTL 630
           A I   N+P +  A  W  L      H   +  +  F   + + L PD     V L
Sbjct: 668 AQIVFDNMPQR-NAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 209/471 (44%), Gaps = 82/471 (17%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+       GR+ H    ++ +  D FV  ++V+MYAKCG ++    V ++M 
Sbjct: 367 LVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMK 426

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKL--------------------------DGID 213
           + D+ S N ++ GY++    + A S F ++                          + +D
Sbjct: 427 FKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALD 486

Query: 214 V---------QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY--------LSKTAVS 256
           V         +PN  T  ++L+ C S+ A+  GK+ H   +K                V 
Sbjct: 487 VFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVI 546

Query: 257 NALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLM--RE 312
           N L+ MY KC   E A  +F+ +    R+V++WT +I G+ QHGD    L+L   M   +
Sbjct: 547 NGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMD 606

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-ALGDFVGTAIVDMYSGLGEIW 371
             I PN++T + AL +CA L     G   HA V++    ++  FV   ++DMYS  G++ 
Sbjct: 607 KSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVD 666

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A+     M +  ++VSW + + G+  + + E+A+  F +M +     D  T+  +L AC
Sbjct: 667 TAQIVFDNMPQR-NAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYAC 725

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S           HS +V              I  +N+        + F      +   + 
Sbjct: 726 S-----------HSGMVDHG-----------INFFNR------MSKDFGVDPGPE--HYA 755

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            M+  + + GR  +A+ L  +M +E   PT   ++A+LSAC     V+ G+
Sbjct: 756 CMVDLWGRAGRLGEAMKLINEMPME---PTPVVWVALLSACRLHSNVELGE 803


>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
 gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
          Length = 864

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 176/538 (32%), Positives = 309/538 (57%), Gaps = 20/538 (3%)

Query: 210 DGIDVQPNHYT--------YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           D  +V P  Y+           +L +C    A+ E K  H + +++       + N L+ 
Sbjct: 37  DQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN 96

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
            Y KCG +E A  VF+G+++R+++SW  +I  + ++    + L +   MR +G   +E+T
Sbjct: 97  AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 156

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            +  L++C    ++      H   +K  + L  +VGTA++D+Y+  G I +A +  + M 
Sbjct: 157 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM- 215

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           +  SSV+W++ +AG+ +N+  EEA+  + +  R     ++FT SS++ ACS L +L   +
Sbjct: 216 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 275

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H+ I KS F SNV V SS ++ Y KCGS  ++  +FS++   ++  WN++I  ++++ 
Sbjct: 276 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 335

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
           R ++ +ILFEKM  +G+ P   TF ++LS C H+GLV++G++ F+ M   YG+ P   HY
Sbjct: 336 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 395

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           SCMVD+LGRAG L  A   I ++P  PTA IW  L A+CR + +L++AE  ++++ EL+P
Sbjct: 396 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 455

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
           ++A  +V LSN+YA      +  + RKL++  ++ K  G SWI++ +K++ F      H 
Sbjct: 456 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 515

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
            + ++   L  L+ +    G+  +           +KE+ ++ HSE+LA+ FGL+ LP
Sbjct: 516 RIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLP 573



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 164/316 (51%), Gaps = 1/316 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           ++  V E+L  C+R   +   +  H  I +  + GD  +   L+N Y+KCG ++    V 
Sbjct: 52  NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M    + S N ++  Y +N +  +A   FL++     + + +T S++L+ CG      
Sbjct: 112 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           E K+LH  ++K        V  ALL +Y KCGM++DA  VFE +  ++ ++W++++ G+ 
Sbjct: 172 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 231

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+ +YE+ L L    +   ++ N++T +  + +C++L     G   HA + K G     F
Sbjct: 232 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 291

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V ++ VDMY+  G + E+     E+ +    + WN  I+GF ++ + +E +  F +M ++
Sbjct: 292 VASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQD 350

Query: 416 DAACDEFTYSSILKAC 431
               +E T+SS+L  C
Sbjct: 351 GMHPNEVTFSSLLSVC 366



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 4/163 (2%)

Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           SL   QF +  V+  CS    L  G++ HA+I K+    + FV +S V+MYAKCG ++  
Sbjct: 250 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 309

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             +  ++   ++   N +++G+AK+A   +    F K+    + PN  T+S++L++CG  
Sbjct: 310 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 369

Query: 232 SAIDEGKQLHAQTMKLQY-LSKTAVS-NALLTMYIKCGMMEDA 272
             ++EG++   + M+  Y LS   V  + ++ +  + G++ +A
Sbjct: 370 GLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 411


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 181/558 (32%), Positives = 299/558 (53%), Gaps = 34/558 (6%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
           A + +  +  +D++ + +   ++L  C  +S    GK++H  ++K   +S   V NAL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 262 MYIKCGMMEDAESVFE----------------------GLVQRNVISWTAIINGFKQHGD 299
           MY +CG +  A  +F+                      G  QR+++SWTA+I G+ +  D
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+  RL   M E+ + PN+ T    + SC  +    +G   HA +++ G  +   + TA
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY   GEI  A+     M K+   ++W A I+ + +    + A + F QM  N    
Sbjct: 273 LVDMYGKCGEIRSARAIFDSM-KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRP 331

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +E T  S+L  C++  +L   +  H+ I K   E +V + ++LI+ Y KCG    A+R+F
Sbjct: 332 NELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLF 391

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           S+    D+ +WN M+  Y  +G   KA+ LF +M   G++P + TF+  L ACSH+GLV 
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G+ +FE M+ ++G++P+  HY CMVDLLGRAG L+ A   I ++P+ P   IW  + AA
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C+ H +  M E  ++++L L+P +    V +SN+YA A    D    RK +K   I KEP
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEKE 708
           G S IEV   ++ F   + +H  + K+ E L ++ +++++ G+            + EKE
Sbjct: 572 GMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKE 631

Query: 709 DRVLYHSERLAVGFGLIS 726
             + YHSE+LA+ FGLIS
Sbjct: 632 TALNYHSEKLAMAFGLIS 649



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 195/410 (47%), Gaps = 25/410 (6%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L+  +D   +  VL  CS+     +G+  H    K  +  D FV  +L+ MY++CG + S
Sbjct: 103 LDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVS 162

Query: 171 MVAVVKQMPYLD----------------------IASCNCLLAGYAKNALFDQAFSFFLK 208
              +  +M   D                      I S   ++AGY +    ++    F++
Sbjct: 163 ARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVR 222

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +   +V PN  T  +++  CG + A+  GK+LHA  ++  +    A++ AL+ MY KCG 
Sbjct: 223 MIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGE 282

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +  A ++F+ +  ++V++WTA+I+ + Q    +   +L   MR++G+ PNE T    L+ 
Sbjct: 283 IRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSL 342

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA      MG  FHA + K+G+ +   + TA++DMY+  G+I  A++   E        +
Sbjct: 343 CAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICT 401

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WN  +AG+  +   E+A++ F++M       ++ T+   L ACS    +   + +  +++
Sbjct: 402 WNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMI 461

Query: 449 KS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
                   V     +++   + G  ++A ++   +    ++  W +M+ A
Sbjct: 462 HDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 190/518 (36%), Positives = 284/518 (54%), Gaps = 15/518 (2%)

Query: 237 GKQLHAQTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           G+  HAQ +K L     + + N L+ MY K      A+ +      R+V++WTA+I G  
Sbjct: 25  GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSV 84

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G +   L     MR D I PN++TF  A  +  SLR+  +G   HA  +K G     F
Sbjct: 85  QNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVF 144

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG +  DMYS  G   EA+K   EM +  +  +WNA ++      + ++A+ AF +  + 
Sbjct: 145 VGCSAFDMYSKAGLTEEARKMFDEMPER-NIATWNAYLSNSVLEGRYDDALTAFIEARKE 203

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                +F  SS+L AC+ L  L   + +H+  VK+    N+ VGS+L++ Y KCGS EDA
Sbjct: 204 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 263

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR--PTNSTFLAVLSACS 533
           ER F ++   ++V+WN+MI  Y+  G+A  A+ LF++M     R  P   TF+ VLSACS
Sbjct: 264 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 323

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
            +G V  G ++FESM   YGI P   HY+C+VDLLGRAG +E A  FI  +PI+PT  +W
Sbjct: 324 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 383

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  A +     ++ +  +  + ELDP D+  +V LSNM+A AG   +A   RK MK  
Sbjct: 384 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 443

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DN 705
            I K  GCSWI   N ++ F +++ SH    ++   L +L  ++E  G+         D 
Sbjct: 444 GIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDL 503

Query: 706 EKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           E+E++   V YHSE++A+ FGLIS+PA      ++ L 
Sbjct: 504 EEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLR 541



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 178/378 (47%), Gaps = 6/378 (1%)

Query: 131 ECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           +C  LGR  HA I KT       F+   LVNMY+K     S   ++   P   + +   L
Sbjct: 20  QCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTAL 79

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           +AG  +N  F  A   F  +    +QPN +T+       GSL +   GKQ+HA  +K   
Sbjct: 80  IAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQ 139

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           +S   V  +   MY K G+ E+A  +F+ + +RN+ +W A ++     G Y+  L     
Sbjct: 140 ISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIE 199

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
            R++GI+P ++  +  L++CA L    +G   H   +K  +    FVG+A+VDMY   G 
Sbjct: 200 ARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGS 259

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV--RNDAACDEFTYSSI 427
           I +A++   EM +  + V+WNA I G+    + + A+  F +M    +  A +  T+  +
Sbjct: 260 IEDAERAFDEMPER-NLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCV 318

Query: 428 LKACSLLPSLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           L ACS   S+    +I  S   +   E      + +++   + G  E A +   ++    
Sbjct: 319 LSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRP 378

Query: 487 VVS-WNSMIKAYSQNGRA 503
            VS W +++ A    G++
Sbjct: 379 TVSVWGALLGASKMFGKS 396



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 5/272 (1%)

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEA 373
           + PN     V   S  S + S +G   HAQ+IK     L  F+   +V+MYS L     +
Sbjct: 4   LSPNSLASLVE--SAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRP-NS 60

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            + L  +  + S V+W A IAG  +N +   A+  FS M R+    ++FT+    KA   
Sbjct: 61  AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L S    +Q+H+  VK+   S+V VG S  + Y+K G  E+A ++F ++   ++ +WN+ 
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +      GR   A+  F +   EGI PT+    +VLSAC+   +++ G+ V    VK   
Sbjct: 181 LSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKAC- 239

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           ++      S +VD+ G+ G +E A      +P
Sbjct: 240 VVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 271



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VLS C+    LE+G+  H L  K  V G+ FV ++LV+MY KCG I+       +MP
Sbjct: 212 VSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMP 271

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
             ++ + N ++ GYA     D A + F  +      V PN+ T+  +L+ C    +++ G
Sbjct: 272 ERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVG 331

Query: 238 KQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGF 294
            ++  ++M+ +Y  +    +   ++ +  + GM+E A    + +  R  +S W A++   
Sbjct: 332 MEIF-ESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGAS 390

Query: 295 KQHGDYE 301
           K  G  E
Sbjct: 391 KMFGKSE 397


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 184/578 (31%), Positives = 313/578 (54%), Gaps = 1/578 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C + E +  G + H  + K     D +V  SL+ MY+KC  ++    V  Q+     
Sbjct: 263 LSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKT 322

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N +++ Y  N         + ++  + + P+  T + +L+ C  + + D G+ +HA+
Sbjct: 323 ELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAE 382

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K    S  A+ +ALLTMY KCG  +DA S+F  +  R+V++W ++I+GF Q+  Y + 
Sbjct: 383 LVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEA 442

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L     M   G  P+       +++C  L+N ++G   H   IK G+    FV +++VDM
Sbjct: 443 LEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDM 502

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           YS       +     +M    + V+WN+ I+ + RN   + +I  FSQM +     D  +
Sbjct: 503 YSKFNFPKMSGNVFSDM-PLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVS 561

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            +S+L + S +  L   + +H  +++ +  S++ + ++LI+ Y KCG  + A+ +F  + 
Sbjct: 562 ITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNML 621

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++V+WN MI     +G   KA+ LF++M   GI P + TF+++L++C+H G +++G K
Sbjct: 622 QTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLK 681

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +F+ M  E+GI P   HY  +VDLLGRAG+L+ A  F+ NLPI+P   IW  L  +CR H
Sbjct: 682 LFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVH 741

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++ +  + ++L+++P   + YV L N+Y E  LQ  A   R  MK K + K PGCSW
Sbjct: 742 HNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSW 801

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           IEV N I  FFS + S     ++Y+ L  L + +   G
Sbjct: 802 IEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 247/510 (48%), Gaps = 16/510 (3%)

Query: 123 VLSYCSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY- 180
           +L  C     L+ G+  H+ +ITK     D ++T SL+N Y KCG   + V V  ++P  
Sbjct: 55  LLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPES 114

Query: 181 ----LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
                D+   N ++ GY +     +  + F ++    V+P+ Y+   +L    S   +  
Sbjct: 115 EVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG--ASDGHLGY 172

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFK 295
            KQ+H  +++  +     + + L+ MY  CG   DA  +F+ L  + NV++W  +I GF 
Sbjct: 173 AKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFG 232

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++G +E  L +  L + + +     +FT  L++C        G   H  ++K G     +
Sbjct: 233 ENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPY 292

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V T+++ MYS    + +A+    ++    + + WNA I+ +  N ++ + ++ + QM   
Sbjct: 293 VCTSLLTMYSKCKLVEDAENVFDQVSVKKTEL-WNAMISAYVGNGRSYDGLKIYKQMKVL 351

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  T +++L +C L+ S      IH+ +VK   +SNV + S+L+  Y+KCG+ +DA
Sbjct: 352 QIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDA 411

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F+ +   DVV+W SMI  + QN +  +A+  +  M V G +P +    +V+SAC+  
Sbjct: 412 NSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGL 471

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
             V  G  +    +K  G+  +    S +VD+  +    +++    S++P+K     W  
Sbjct: 472 KNVNLGCTIHGLAIKS-GLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVA-WNS 529

Query: 596 LFAACRCHS---DLKMAEFISKQILELDPD 622
           +  +C C +   DL ++ F       L PD
Sbjct: 530 II-SCYCRNGLPDLSISLFSQMTQYGLFPD 558



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 258/527 (48%), Gaps = 12/527 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLA 191
           L   ++ H    +    GD F+ + L+ MY  CG       + K++    ++ + N ++ 
Sbjct: 170 LGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIG 229

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           G+ +N L++ +   +L     +V+    ++++ L+ C     +  G Q+H   +KL + +
Sbjct: 230 GFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFEN 289

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V  +LLTMY KC ++EDAE+VF+ +  +    W A+I+ +  +G     L++   M+
Sbjct: 290 DPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMK 349

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
              I P+  T T  L+SC  + +   G + HA+++KR +     + +A++ MYS  G   
Sbjct: 350 VLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSD 409

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A      + K    V+W + I+GF +N+K  EA+E ++ M       D    +S++ AC
Sbjct: 410 DANSIFNTI-KGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSAC 468

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L ++     IH   +KS  E +V V SSL++ Y+K    + +  VFS +   ++V+WN
Sbjct: 469 TGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWN 528

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           S+I  Y +NG    +I LF +M   G+ P + +  +VL + S   +++ G+ V   ++++
Sbjct: 529 SIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQ 588

Query: 552 YGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KM 608
              +P +    + ++D+  + G L+ A     N+ ++     W  + A C  H D    M
Sbjct: 589 R--IPSDLQLENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGCGSHGDWLKAM 645

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           + F   +   + PDD    +T  ++          EE  KL ++  +
Sbjct: 646 SLFDEMRSFGIAPDD----ITFISLLTSCNHCGFIEEGLKLFQLMTV 688



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 34/389 (8%)

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
           +V +V+Q  Y+D       L  Y++N L                    +TY ++L  CG 
Sbjct: 24  IVTLVQQGQYVDA------LQFYSRNPL----------------NATRFTYPSLLKACGF 61

Query: 231 LSAIDEGKQLHAQTM-KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-----RNV 284
           LS +  GK +H+  + K  + S   ++ +L+  Y KCG   +A  VF+ L +     ++V
Sbjct: 62  LSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDV 121

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFH 342
             W +I+NG+ + G  ++ +   C M+  G+ P+ Y+  + L +     + H+GY    H
Sbjct: 122 TFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGA----SDGHLGYAKQIH 177

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
              +++      F+ + ++ MY   G   +A +  KE+    + V+WN  I GF  N   
Sbjct: 178 GYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLW 237

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           E ++E +      +      +++S L AC     ++   Q+H  +VK  FE++ +V +SL
Sbjct: 238 ENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL 297

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y+KC   EDAE VF Q++      WN+MI AY  NGR+   + ++++M V  I P +
Sbjct: 298 LTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDS 357

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKE 551
            T   VLS+C   G    G+ +   +VK 
Sbjct: 358 LTATNVLSSCCLVGSYDFGRLIHAELVKR 386



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 139/271 (51%), Gaps = 11/271 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  V+S C+  + + LG   H L  K+ +  D FV +SLV+MY+K    K    V 
Sbjct: 457 DSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVF 516

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  ++ + N +++ Y +N L D + S F ++    + P+  + +++L    S++ + 
Sbjct: 517 SDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLR 576

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +GK +H   ++ +  S   + NAL+ MYIKCG ++ A+ +F+ ++Q N+++W  +I G  
Sbjct: 577 KGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCG 636

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRG 349
            HGD+ K + L   MR  GI P++ TF   L SC     +H G+      +F    ++ G
Sbjct: 637 SHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSC-----NHCGFIEEGLKLFQLMTVEHG 691

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           +         IVD+    G + +A   +K +
Sbjct: 692 IEPRMEHYVNIVDLLGRAGRLDDAYAFVKNL 722



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/422 (20%), Positives = 186/422 (44%), Gaps = 44/422 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D      VLS C      + GR  HA + K  +  +  + ++L+ MY+KCG+     ++ 
Sbjct: 356 DSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIF 415

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +   D+ +   +++G+ +N  + +A  F+  +     +P+    +++++ C  L  ++
Sbjct: 416 NTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVN 475

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G  +H   +K        V+++L+ MY K    + + +VF  +  +N+++W +II+ + 
Sbjct: 476 LGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYC 535

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           ++G  +  + L   M + G+ P+  + T  L S +S+     G   H  +I++ +     
Sbjct: 536 RNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQ 595

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  A++DMY   G +  A+   + M ++ + V+WN  IAG   +    +A+  F +M   
Sbjct: 596 LENALIDMYIKCGFLKYAQHIFQNMLQT-NLVTWNIMIAGCGSHGDWLKAMSLFDEMRSF 654

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             A D+ T+ S+L +C                                   N CG  E+ 
Sbjct: 655 GIAPDDITFISLLTSC-----------------------------------NHCGFIEEG 679

Query: 476 ERVFSQLTAADVVS-----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            ++F  +T    +      + +++    + GR   A    + + +E   P  S +L++L 
Sbjct: 680 LKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIE---PDRSIWLSLLC 736

Query: 531 AC 532
           +C
Sbjct: 737 SC 738



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 143/342 (41%), Gaps = 74/342 (21%)

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESNVHVGSSL 462
           + ++A     RN      FTY S+LKAC  L +L   + IHS I+ K  F S+ ++ +SL
Sbjct: 32  QYVDALQFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSL 91

Query: 463 IEAYNKCGSWEDAERVF-----SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           I  Y KCGS+ +A +VF     S+++  DV  WNS++  Y + G  ++ I  F +M + G
Sbjct: 92  INFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFG 151

Query: 518 IRPTNSTFLAVLSACS------------------------HSGLVQ---------DGQKV 544
           +RP   +   +L A                           SGL+          D  ++
Sbjct: 152 VRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRL 211

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL---IFISNLPIKPTAPIWRPLFAAC- 600
           F+ +  +  ++     ++ M+   G  G  E +L   +   N  +K  +  +    +AC 
Sbjct: 212 FKELEDKGNVVA----WNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACC 267

Query: 601 ---------RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
                    + H DL    F          +D  V  +L  MY++  L  DAE     + 
Sbjct: 268 QGEFVSFGMQVHCDLVKLGF---------ENDPYVCTSLLTMYSKCKLVEDAENVFDQVS 318

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           +K+          E++N +   +  N    +  K+Y+++K L
Sbjct: 319 VKK---------TELWNAMISAYVGNGRSYDGLKIYKQMKVL 351


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 184/571 (32%), Positives = 320/571 (56%), Gaps = 8/571 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG++ H+++ K  +  + F  ++L++MYAKCG +     V + MP  +  S N L+A 
Sbjct: 110 LKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVAS 169

Query: 193 YAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           Y++    D AF     ++L+G+++     T S +L +  +        QLH + +K    
Sbjct: 170 YSRVGDCDMAFWVLSCMELEGVEIDDG--TVSPLLTLLDNAMFYKLTMQLHCKIVKHGLE 227

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCL 309
               V NA +T Y +C  ++DAE VF+G V  R++++W +++  +  H   +   ++   
Sbjct: 228 LFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLD 287

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M+  G +P+ YT+T  + +C+   +   G   H  VIKRG+     V  A++ MY    +
Sbjct: 288 MQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFND 347

Query: 370 --IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
             + +A +    M       +WN+ +AG+ +   +E+A+  F QM       D +T+S++
Sbjct: 348 RCMEDALRIFFSMDLK-DCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAV 406

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           +++CS L +L   +Q H   +K  F++N +VGSSLI  Y+KCG  EDA + F   +  + 
Sbjct: 407 IRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNA 466

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           + WNS+I  Y+Q+G+   A+ LF  M    ++  + TF+AVL+ACSH+GLV++G    ES
Sbjct: 467 IVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIES 526

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           M  ++GI P + HY+C +DL GRAG L+ A   +  +P +P A + + L  ACR   D++
Sbjct: 527 MESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIE 586

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           +A  I+K +LEL+P++   YV LS MY    +  +     ++M+ + + K PG SWIEV 
Sbjct: 587 LASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVK 646

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           N ++ F +++ SH +  ++Y  L+QL + I+
Sbjct: 647 NNVHAFNAEDHSHPQCEEIYILLQQLNEGIK 677



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 207/442 (46%), Gaps = 7/442 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K     D +   +L+  YAKC ++ S   V  +MP+ D  S N +++ +A +   
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           D  +     +       +  T+ ++L     +  +  G+QLH+  +K+         +AL
Sbjct: 76  DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY KCG ++D   VF+ + +RN +SW  ++  + + GD +    ++  M  +G++ ++
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDD 195

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T +  L    +     +    H +++K G+ L + V  A +  YS    + +A++    
Sbjct: 196 GTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDG 255

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
                  V+WN+ +  +  ++K + A + F  M       D +TY+ I+ ACS+      
Sbjct: 256 AVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTC 315

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAY----NKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            + +H  ++K   +++V V ++LI  Y    ++C   EDA R+F  +   D  +WNS++ 
Sbjct: 316 GKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRC--MEDALRIFFSMDLKDCCTWNSILA 373

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y Q G +  A+ LF +M    I   + TF AV+ +CS    +Q GQ+ F  +  + G  
Sbjct: 374 GYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQ-FHVLALKVGFD 432

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
                 S ++ +  + G +E A
Sbjct: 433 TNSYVGSSLIFMYSKCGIIEDA 454



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD--IKSMVAVVKQMPY 180
           ++  CS +E    G+  H L+ K  +     V+ +L++MY +  D  ++  + +   M  
Sbjct: 303 IVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDL 362

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  + N +LAGY +  L + A   FL++  + ++ +HYT+S ++  C  L+ +  G+Q 
Sbjct: 363 KDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQF 422

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K+ + + + V ++L+ MY KCG++EDA   FE   + N I W +II G+ QHG  
Sbjct: 423 HVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQG 482

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCA 330
              L L  +M+E  +  +  TF   L +C+
Sbjct: 483 NIALDLFYMMKERKVKLDHITFVAVLTACS 512



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 2/144 (1%)

Query: 94  GFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
           G  +D     + + C  +E  +D      V+  CS    L+LG+++H L  K     + +
Sbjct: 379 GLSEDALRLFLQMRCLVIE--IDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSY 436

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V +SL+ MY+KCG I+      +     +    N ++ GYA++   + A   F  +    
Sbjct: 437 VGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERK 496

Query: 214 VQPNHYTYSTMLAICGSLSAIDEG 237
           V+ +H T+  +L  C     ++EG
Sbjct: 497 VKLDHITFVAVLTACSHNGLVEEG 520


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 206/695 (29%), Positives = 349/695 (50%), Gaps = 39/695 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF---PDGFIDDGCSNTV 104
           A QLF+  P+R  +S + +I         +  S NG+S   +SF    +   ++G    +
Sbjct: 241 ALQLFDIMPERNLVSWNSMI---------RVFSDNGFS--EESFLLLGEMMEENGDGAFM 289

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
           P          D   ++ VL  C+RE  + LG+  H    K  +  +  +  +L++MY+K
Sbjct: 290 P----------DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 339

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYS 222
           CG I +   + K     ++ S N ++ G++        F    ++   G DV+ +  T  
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
             + +C   S +   K+LH  ++K +++    V+NA +  Y KCG +  A+ VF G+  +
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
            V SW A+I G  Q  D    L     M+  G+ P+ +T    L++C+ L++  +G   H
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
             +I+  +    FV  +++ +Y   GE+   +     M +  S VSWN  I G+ +N   
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFP 578

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           + A+  F QMV         +   +  ACSLLPSL    + H+  +K   E +  +  SL
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           I+ Y K GS   + +VF+ L      SWN+MI  Y  +G A++AI LFE+M   G  P +
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFI 581
            TFL VL+AC+HSGL+ +G +  + M   +G+ P   HY+C++D+LGRAG+L+ AL +  
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +  +    IW+ L ++CR H +L+M E ++ ++ EL+P+    YV LSN+YA  G   
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           D  + R+ M    + K+ GCSWIE+  K++ F    +      ++      L  +I  +G
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878

Query: 702 H-----------TDNEKEDRVLYHSERLAVGFGLI 725
           +           ++ EK +++  HSE+LA+ +GLI
Sbjct: 879 YRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLI 913



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 224/450 (49%), Gaps = 15/450 (3%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           LL ++ +  +L    + + +E+GR+ H L++  T +  D  +   ++ MYA CG      
Sbjct: 81  LLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSR 140

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSL 231
            V   +   ++   N +++ Y++N L+D+    F+++    D+ P+H+TY  ++  C  +
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S +  G  +H   +K   +    V NAL++ Y   G + DA  +F+ + +RN++SW ++I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260

Query: 292 NGFKQHGDYEKPLRLVCLMREDGID----PNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
             F  +G  E+   L+  M E+  D    P+  T    L  CA  R   +G   H   +K
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +     +  A++DMYS  G I  A+   K M  + + VSWN  + GF     T    +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFD 379

Query: 408 AFSQMVRN--DAACDEFTYSSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
              QM+    D   DE T  + +  C   S LPSL   +++H   +K +F  N  V ++ 
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---KELHCYSLKQEFVYNELVANAF 436

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           + +Y KCGS   A+RVF  + +  V SWN++I  ++Q+   R ++    +M + G+ P +
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEY 552
            T  ++LSACS    ++ G++V   +++ +
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 15/273 (5%)

Query: 291 INGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFT-----VALASCASLRNSHMGYMFHAQ 344
           I+ F + GD +K  R V   + +D    + +        + L +    ++  MG   H Q
Sbjct: 50  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-Q 108

Query: 345 VIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           ++     L   D + T I+ MY+  G   +++     + +S +   WNA I+ + RN+  
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-RSKNLFQWNAVISSYSRNELY 167

Query: 403 EEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E +E F +M+   D   D FTY  ++KAC+ +  +     +H  +VK+    +V VG++
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA 227

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE----G 517
           L+  Y   G   DA ++F  +   ++VSWNSMI+ +S NG + ++ +L  +M+ E     
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             P  +T + VL  C+    +  G+ V    VK
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/681 (28%), Positives = 335/681 (49%), Gaps = 80/681 (11%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA I K+    D +++A L+  Y+          +++ +P   + S + L+    K  LF
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            Q+   F ++    + P+ +    +  +C  LSA   GKQ+H             V  +L
Sbjct: 98  SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN- 318
             MY++CG M DA  VF+ + +++V++ +A++ G+ + G  E+ +R++  M + GI+PN 
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217

Query: 319 ----------------------------------EYTFTVALASCASLRNSHMGYMFHAQ 344
                                             + T +  L S     N +MG   H  
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIW--------------------------------- 371
           VIK+G+     V +A++DMY   G ++                                 
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337

Query: 372 -EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            E     KE     + VSW + IAG  +N K  EA+E F +M       +  T  S+L A
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPA 397

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C  + +L      H   V+     +VHVGS+LI+ Y KCG  + ++ VF+ +   ++V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCW 457

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           NS++  YS +G+A++ + +FE ++   ++P   +F ++LSAC   GL  +G K F  M +
Sbjct: 458 NSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSE 517

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           EYGI P   HYSCMV+LLGRAGKL+ A   I  +P +P + +W  L  +CR  +++ +AE
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             ++++  L+P++   YV +SN+YA  G+  + +  R  M+   + K PGCSWI+V NK+
Sbjct: 578 IAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKV 637

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN----------EKEDRVLY-HSERLA 719
           Y   + +KSH ++ ++ EK+ ++ +++   GH  N          ++++++L+ HSE+LA
Sbjct: 638 YTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKLA 697

Query: 720 VGFGLISLPAKNKFECSRTLE 740
           V FGL++ P     +  + L 
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLR 718



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/387 (22%), Positives = 157/387 (40%), Gaps = 71/387 (18%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  +   C+     + G++ H +   + +  D FV  SL +MY +CG +     V 
Sbjct: 115 DTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVF 174

Query: 176 KQMPYLDIASCNCLLAGYAKNALFD----------------------------------- 200
            +M   D+ +C+ LL GYA+    +                                   
Sbjct: 175 DRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHK 234

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +A   F K+  +   P+  T S++L   G    ++ G+Q+H   +K   L    V +A+L
Sbjct: 235 EAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAML 294

Query: 261 TMYIKCGMMEDAESVFE--------------------GLVQR---------------NVI 285
            MY K G +     +F+                    GLV +               NV+
Sbjct: 295 DMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
           SWT+II G  Q+G   + L L   M+  G+ PN  T    L +C ++     G   H   
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414

Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           ++  +     VG+A++DMY+  G I +  + +  M  + + V WN+ + G+  + K +E 
Sbjct: 415 VRVHLLDDVHVGSALIDMYAKCGRI-KMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEV 473

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACS 432
           +  F  ++R     D  +++S+L AC 
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACG 500



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 144/312 (46%), Gaps = 36/312 (11%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V  VL      E L +GR+ H  + K  +  D+ V +++++MY K G +  ++ + 
Sbjct: 251 DQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLF 310

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGID--------------- 213
            +   ++   CN  + G ++N L D+A   F       ++L+ +                
Sbjct: 311 DEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDI 370

Query: 214 -------------VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
                        V+PN  T  +ML  CG+++A+  G+  H   +++  L    V +AL+
Sbjct: 371 EALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALI 430

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            MY KCG ++ ++ VF  +  +N++ W +++NG+  HG  ++ + +   +    + P+  
Sbjct: 431 DMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFI 490

Query: 321 TFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +FT  L++C  +  +  G+  F+    + G+       + +V++    G++ EA   +KE
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550

Query: 380 MGKSASSVSWNA 391
           +     S  W A
Sbjct: 551 IPFEPDSCVWGA 562



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/495 (21%), Positives = 196/495 (39%), Gaps = 81/495 (16%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            Q HA+ +K    +   +S  L+  Y       DA+ + + +    V S++++I    + 
Sbjct: 35  TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKA 94

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
             + + + +   M   G+ P+ +        CA L     G   H      G+ +  FV 
Sbjct: 95  KLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154

Query: 358 TAIVDMYSGLGEIWEAKKQ-------------------------------LKEMGKSA-- 384
            ++  MY   G + +A+K                                L EM KS   
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214

Query: 385 -SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            + VSWN  ++GF R+   +EA+  F +M       D+ T SS+L +     +L    QI
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS----------------------- 480
           H  ++K     +  V S++++ Y K G      ++F                        
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334

Query: 481 ------------QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
                       Q    +VVSW S+I   +QNG+  +A+ LF +M V G++P   T  ++
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIK 587
           L AC +   +  G+      V+ +  L ++ H  S ++D+  + G+++++ I  + +P K
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVH--LLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK 452

Query: 588 PTAPIWRPLFAACRCHSDLK--MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
                W  L      H   K  M+ F S     L PD    +++ +++ +  G     +E
Sbjct: 453 NLV-CWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPD----FISFTSLLSACGQVGLTDE 507

Query: 646 QRKLMKMKEISKEPG 660
             K   M  +S+E G
Sbjct: 508 GWKYFNM--MSEEYG 520



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 4/173 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C     L  GR  H    +  +  D  V ++L++MYAKCG IK    V   MP  +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N L+ GY+ +    +  S F  L    ++P+  +++++L+ CG +   DEG + + 
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-YF 512

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
             M  +Y  K  + +   ++ +  + G +++A  + + +  + +   W A++N
Sbjct: 513 NMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565


>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 182/522 (34%), Positives = 284/522 (54%), Gaps = 32/522 (6%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           L+ DG   +P++YTY  +   C  LS I  G ++    + L + S   VSNA++ + + C
Sbjct: 98  LQCDG--TKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSC 155

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G ++ A  +F+    R+++SW ++ING+ + G   + L     M+ +GI P+E T    +
Sbjct: 156 GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVV 215

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM------ 380
           +SCA L +  +G   H  + + G+ L   +  A++DMY   G +  A+K    M      
Sbjct: 216 SSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMV 275

Query: 381 -------GKSASS-----------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
                  G + S                  V WNA I G+    + +EA+  F++M   +
Sbjct: 276 SWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMN 335

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              DE T  S L ACS L +L     IH  I K +   NV +G++LI+ Y KCG    A 
Sbjct: 336 INPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAI 395

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +VF +L   + ++W ++I   + +G A  AI  F +M+   + P   TFL +LSAC H G
Sbjct: 396 QVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGG 455

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV++G+K F  M  ++ + P+  HYSCMVDLLGRAG LE A   I ++PI+  A +W  L
Sbjct: 456 LVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 515

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
           F ACR H ++ M E  + ++L++DP D+ +YV L+NMY EA +  +A + RKLM+ + + 
Sbjct: 516 FFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVE 575

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           K PGCS IEV   +Y F  ++KSH +  ++YE L QL +Q+E
Sbjct: 576 KTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 617



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 188/409 (45%), Gaps = 36/409 (8%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+R   + +G      +       D FV+ +++++   CGD+     +  +    D+ S 
Sbjct: 117 CARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSW 176

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N ++ GY +     +A +F+ ++    ++P+  T   +++ C  L  +D G++ H    +
Sbjct: 177 NSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE 236

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE----- 301
                   ++NAL+ MY+KCG +E A  +F+ +  + ++SWT ++ G+ Q G  +     
Sbjct: 237 NGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKL 296

Query: 302 --------------------------KPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
                                     + L L   M+   I+P+E T    L++C+ L   
Sbjct: 297 FDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGAL 356

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   H  + K  ++L   +GTA++DMY+  G+I +A +  +E+    +S++W A I+G
Sbjct: 357 DVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL-PGRNSLTWTAIISG 415

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
              +     AI  FS+M+ N    DE T+  +L AC     +    +  S++  SKF  +
Sbjct: 416 LALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM-SSKFNLS 474

Query: 456 VHVG--SSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNG 501
             +   S +++   + G  E+AE +   +   AD V W ++  A   +G
Sbjct: 475 PKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 523



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 144/310 (46%), Gaps = 36/310 (11%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI------- 168
           D+  +I V+S C++ E L+LGR  H  I +  +     +  +L++MY KCG++       
Sbjct: 207 DEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLF 266

Query: 169 -----KSMVA-------------------VVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
                K+MV+                   +  +MP  D+   N ++ GY       +A +
Sbjct: 267 DSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALA 326

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F ++  +++ P+  T  + L+ C  L A+D G  +H    K +     A+  AL+ MY 
Sbjct: 327 LFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYA 386

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG +  A  VF+ L  RN ++WTAII+G   HG+    +     M ++ + P+E TF  
Sbjct: 387 KCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLG 446

Query: 325 ALASCASLRNSHMGYMFHAQVIKR---GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            L++C        G  + +Q+  +      L  +  + +VD+    G + EA++ +K M 
Sbjct: 447 LLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHY--SCMVDLLGRAGLLEEAEELIKSMP 504

Query: 382 KSASSVSWNA 391
             A +V W A
Sbjct: 505 IEADAVVWGA 514



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 46/289 (15%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATC 440
           ++ ++ SWN  I GF  ++   EA+  + ++++ D    D +TY  + KAC+ L  +   
Sbjct: 67  RNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMG 126

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            +I   ++   F+S++ V +++I     CG  + A ++F +    D+VSWNSMI  Y + 
Sbjct: 127 SEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRR 186

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH-------------------------- 534
           G A +A+  + +M VEGI+P   T + V+S+C+                           
Sbjct: 187 GWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA 246

Query: 535 ---------SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
                     G ++  +K+F+SM  +  +      ++ MV    ++G L++A      +P
Sbjct: 247 NALMDMYMKCGNLESARKLFDSMTNKTMV-----SWTTMVVGYAQSGLLDMAWKLFDEMP 301

Query: 586 IKPTAPIWRPLFAACRCHSDL---KMAEFISKQILELDPDDAAVYVTLS 631
            K   P W  +      H++     +A F   Q + ++PD+  +   LS
Sbjct: 302 DKDVVP-WNAMIGG-YVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 348


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 195/584 (33%), Positives = 312/584 (53%), Gaps = 5/584 (0%)

Query: 118 QFVIEV-LSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVV 175
            F I + L  C+    LELG+  H    K    G D FV ++LV +Y+KCG +   + V 
Sbjct: 103 NFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVF 162

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAI 234
           ++    D      ++ GY +N   ++A + F ++  +D V  +  T  ++++ C  L  +
Sbjct: 163 EEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNV 222

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G  +H   ++ ++     + N+LL +Y K G  + A ++F  + +++VISW+ +I  +
Sbjct: 223 KAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACY 282

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +    + L L   M E   +PN  T   AL +CA  RN   G   H   + +G  L  
Sbjct: 283 ANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDF 342

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V TA++DMY       EA    + + K    VSW A ++G+ +N    +++  F  M+ 
Sbjct: 343 SVSTALIDMYMKCSCPDEAVDLFQRLPKK-DVVSWVALLSGYAQNGMAYKSMGVFRNMLS 401

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D      IL A S L        +H  +V+S F SNV VG+SLIE Y+KCGS  D
Sbjct: 402 DGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGD 461

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACS 533
           A ++F  +   DVV W+SMI AY  +GR  +A+ +F++MV    +RP N TFL++LSACS
Sbjct: 462 AVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACS 521

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV++G K+F+ MV +Y + P+  H+  MVDLLGR G+L  A+  I+ +PI     +W
Sbjct: 522 HAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVW 581

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  ACR H +++M E  +K +  LDP  A  Y+ LSN+YA  G   +  E R  +K +
Sbjct: 582 GALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKER 641

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
            + K  G S +EV   ++ F + ++ H +  K+YE L++L  Q+
Sbjct: 642 GLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQM 685



 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 287/516 (55%), Gaps = 16/516 (3%)

Query: 238  KQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            K+ HA+     LQY S+     A+  MY+    ++ A  VFE +       W  +I GF 
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAI--MYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFA 794

Query: 296  QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
              G +   L L   M E G+ P+++ F  AL SCA L +   G + H  ++  G +   F
Sbjct: 795  TDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLF 854

Query: 356  VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            V  A+VDMY+  G+I  A+    +M      VSW + I+G+  N    E +  F  M  +
Sbjct: 855  VDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISGYAHNGYNSETLGFFDLMRSS 913

Query: 416  DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                +  +  S+L AC  L +L   E  HS ++++ FE ++ V +++++ Y+KCGS + A
Sbjct: 914  GVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA 973

Query: 476  ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
              +F +    D+V W++MI +Y  +G  RKAI LF++MV  G+RP++ TF  VLSACSHS
Sbjct: 974  RCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHS 1033

Query: 536  GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            GL+++G+  F+ M +E+ I  + ++Y+CMVDLLGRAG+L  A+  I N+P++P A IW  
Sbjct: 1034 GLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGS 1093

Query: 596  LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
            L  ACR H++L +AE I+  +  LDP  A  +V LSN+YA      + E+ RK+M  +  
Sbjct: 1094 LLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGA 1153

Query: 656  SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            +K  G S +E  N++++F   ++SH +  K+Y KL++L   ++ +G+            +
Sbjct: 1154 NKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGYVPLTDFVLHDIEE 1213

Query: 705  NEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              KE  + YHSERLA+ FGLI+         ++ L 
Sbjct: 1214 EAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLR 1249



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 238/492 (48%), Gaps = 11/492 (2%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +Q ++++   C+    +    + H+ + KT +  D F    L ++YAKC  +++   V  
Sbjct: 4   RQVLVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + P+ ++   N  L  Y +   +++    F L +      P+++T    L  C  L  ++
Sbjct: 61  ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120

Query: 236 EGKQLHAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            GK +H    K   + S   V +AL+ +Y KCG M +A  VFE   + + + WT+++ G+
Sbjct: 121 LGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180

Query: 295 KQHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +Q+ D E+ L L   M   D +  +  T    +++CA L N   G   H  VI+R    G
Sbjct: 181 QQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFD-G 239

Query: 354 DF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
           D  +  +++++Y+  G    A     +M +    +SW+  IA +  N+   EA+  F +M
Sbjct: 240 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEK-DVISWSTMIACYANNEAANEALNLFHEM 298

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +      +  T  S L+AC++  +L   ++IH   V   FE +  V ++LI+ Y KC   
Sbjct: 299 IEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP 358

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           ++A  +F +L   DVVSW +++  Y+QNG A K++ +F  M+ +GI+P     + +L+A 
Sbjct: 359 DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAAS 418

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           S  G+ Q    +   +V+  G        + +++L  + G L  A+     + ++    I
Sbjct: 419 SELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV-I 476

Query: 593 WRPLFAACRCHS 604
           W  + AA   H 
Sbjct: 477 WSSMIAAYGIHG 488



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 173/336 (51%), Gaps = 2/336 (0%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +LD   ++ V+S C++   ++ G   H L+ +    GD  +  SL+N+YAK G  K    
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +  +MP  D+ S + ++A YA N   ++A + F ++     +PN  T  + L  C     
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           ++EGK++H   +   +    +VS AL+ MY+KC   ++A  +F+ L +++V+SW A+++G
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q+G   K + +   M  DGI P+       LA+ + L         H  V++ G    
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FVG +++++YS  G + +A K  K M      V W++ IA +  + +  EA+E F QMV
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMV 501

Query: 414 RNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           +N     +  T+ SIL ACS    +    +I  R+V
Sbjct: 502 KNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMV 537



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 175/407 (42%), Gaps = 46/407 (11%)

Query: 132  CLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
            C    ++ HA I    +  D  +      MY     I +   V + +P       N ++ 
Sbjct: 732  CFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 791

Query: 192  GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            G+A +  F  +   + K+    ++P+ + +   L  C  LS +  GK +H   +     +
Sbjct: 792  GFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSN 851

Query: 252  KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
               V  AL+ MY KCG +E A  VF+ +  R+++SWT++I+G+  +G   + L    LMR
Sbjct: 852  DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911

Query: 312  EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
              G+ PN  +    L +C +L     G  FH+ VI+ G      V TAI+DMYS  G + 
Sbjct: 912  SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971

Query: 372  EAKKQLKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
             A+    E  GK    V W+A IA +  +    +AI+ F QMV+        T++ +L A
Sbjct: 972  LARCLFDETAGKDL--VCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA 1029

Query: 431  CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS- 489
            CS           HS                        G  E+ +  F  +T   V++ 
Sbjct: 1030 CS-----------HS------------------------GLLEEGKMYFQLMTEEFVIAR 1054

Query: 490  ----WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
                +  M+    + G+  +A+ L E M VE   P  S + ++L AC
Sbjct: 1055 KLSNYACMVDLLGRAGQLSEAVDLIENMPVE---PDASIWGSLLGAC 1098



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 5/274 (1%)

Query: 124  LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
            L  C+    L+ G+  H  +       D FV A+LV+MYAKCGDI++   V  +M   D+
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 184  ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
             S   +++GYA N    +   FF  +    V PN  +  ++L  CG+L A+ +G+  H+ 
Sbjct: 885  VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944

Query: 244  TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
             ++  +     V+ A++ MY KCG ++ A  +F+    ++++ W+A+I  +  HG   K 
Sbjct: 945  VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004

Query: 304  LRLVCLMREDGIDPNEYTFTVALASCAS---LRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L   M + G+ P+  TFT  L++C+    L    M +    +       L ++    +
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNY--ACM 1062

Query: 361  VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            VD+    G++ EA   ++ M     +  W + + 
Sbjct: 1063 VDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLG 1096



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 104/227 (45%), Gaps = 17/227 (7%)

Query: 78   GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGR 137
            G + NGY++    F D     G    +P          ++  ++ VL  C     L  G 
Sbjct: 893  GYAHNGYNSETLGFFDLMRSSG---VIP----------NRVSILSVLLACGNLGALRKGE 939

Query: 138  RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
             +H+ + +T    D  V  ++++MY+KCG +     +  +    D+   + ++A Y  + 
Sbjct: 940  WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHG 999

Query: 198  LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
               +A   F ++    V+P+H T++ +L+ C     ++EGK ++ Q M  +++    +SN
Sbjct: 1000 HGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSN 1058

Query: 258  --ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
               ++ +  + G + +A  + E + V+ +   W +++   + H + +
Sbjct: 1059 YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLD 1105


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/595 (31%), Positives = 310/595 (52%), Gaps = 42/595 (7%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLS 232
           V  Q+P       N LL   ++++  ++    +  L  I+    + +++ ++L     +S
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A + G ++H    KL ++    +   L+ MY  C  + DA  +F+ +   + ++W  II+
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ Q+G Y+  LRL   MR   + P+       L++C    N   G   H  V   G A+
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS------------------------ 388
              + TA+++MY+  G +  A+K    +      VS                        
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 389 ------WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
                 W+A I+G+  + + +EA++ F +M++  +  D+ T  S++ ACS + +LA    
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANW 375

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH+ + +S F   + V ++LI+ Y KCG+   A  VF  +   +V+SW+SMI A++ +G 
Sbjct: 376 IHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGN 435

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
           A  AI LF +M    I P   TF+ VL AC H+GLV++G+K+F SM+ E+GI P   HY 
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD 622
           CMVDL  RA  L  A+  I  +P  P   IW  L +AC+ H + ++ EF +K++LEL+PD
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPD 555

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
                V LSN+YA+     D    RK M  K ISKE   S IE+ N+++ F   ++ H +
Sbjct: 556 HDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQ 615

Query: 683 MPKVYEKLKQLMQQIEDIGH--------TDNEKEDR---VLYHSERLAVGFGLIS 726
             ++YEKL +++ +++ +G+         D E+ED+   VL+HSE+LAV +GLIS
Sbjct: 616 SDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLIS 670



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/450 (21%), Positives = 194/450 (43%), Gaps = 38/450 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD+     +L   S+      G   H L +K     D F+   L+ MYA C  I     +
Sbjct: 119 LDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLL 178

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M + D  + N ++ GY +N  +D A   F  +   D++P+     T+L+ CG    +
Sbjct: 179 FDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNL 238

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC---------------------------- 266
             G+ +H       Y   + +  AL+ MY  C                            
Sbjct: 239 SYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGY 298

Query: 267 ---GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
              GM++DA  +F+ +++R+++ W+A+I+G+ +    ++ L+L   M +    P++ T  
Sbjct: 299 AKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITML 358

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             +++C+ +         H  V + G      V  A++DMY+  G + +A++  + M + 
Sbjct: 359 SVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRK 418

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            + +SW++ I  F  +   + AI+ F +M   +   +  T+  +L AC     +   E++
Sbjct: 419 -NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKL 477

Query: 444 HSRIVKSKFESNV--HVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQN 500
            S ++     S    H G  +++ Y +      A E + +   A +V+ W S++ A   +
Sbjct: 478 FSSMINEHGISPTREHYG-CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVH 536

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           G A       ++++   + P +   L VLS
Sbjct: 537 GEAELGEFAAKRLL--ELEPDHDGALVVLS 564



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 94/192 (48%), Gaps = 2/192 (1%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            S+ D+  ++ V+S CS    L      H  + ++       V  +L++MYAKCG++   
Sbjct: 349 RSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKA 408

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V + MP  ++ S + ++  +A +   D A   F ++  ++++PN  T+  +L  CG  
Sbjct: 409 REVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHA 468

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTA 289
             ++EG++L +  +    +S T      ++ +Y +   +  A  + E +    NVI W +
Sbjct: 469 GLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGS 528

Query: 290 IINGFKQHGDYE 301
           +++  + HG+ E
Sbjct: 529 LMSACQVHGEAE 540


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 204/658 (31%), Positives = 328/658 (49%), Gaps = 88/658 (13%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-D 213
           SLV  +A  G ++   A    +P    D    N +++ +A+ +L   A S F  L G   
Sbjct: 99  SLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGS 158

Query: 214 VQPNHYTYSTMLAICGSLS--AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC----- 266
           ++P+ Y+++ +++  G +   A     QLH   +K    +  +VSNAL+ +Y+KC     
Sbjct: 159 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEA 218

Query: 267 -----------------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                                        G +  A SVFE +  +  + W A+I+G+ Q 
Sbjct: 219 SWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 278

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG------MA 351
           G       L   M  + +  +E+TFT  L++CA+      G   H Q+I+         A
Sbjct: 279 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 338

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMG------------------------------ 381
           L   V  A+V +YS  G+I  AK+    M                               
Sbjct: 339 LP--VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 396

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
              + +SW   ++G+     +E+A++ F+QM   D    ++TY+  + AC  L +L    
Sbjct: 397 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 456

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H+ +V+  FE++   G++L+  Y KCG+  DA  VF  +   D VSWN+MI A  Q+G
Sbjct: 457 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 516

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
             R+A+ LF++MV EGI P   +FL +L+AC+H+GLV +G   FESM +++GI P E HY
Sbjct: 517 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 576

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           + ++DLLGR+G++  A   I  +P +PT  IW  + + CR + D++   + + Q+  + P
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 636

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
                Y+ LSN Y+ AG   DA   RKLM+ + + KEPGCSWIEV +KI+ F   +  H 
Sbjct: 637 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 696

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           E  +VY+ L+ +  ++  +G+  +           EKE  +  HSE+LAVGFGL+ LP
Sbjct: 697 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLP 754



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 69/435 (15%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D     ++V  Y + GD+ +  +V +++        N +++GY ++ +   AF  F ++ 
Sbjct: 233 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 292

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ--YLSKTA--VSNALLTMYIKC 266
              V  + +T++++L+ C +      GK +H Q ++LQ  ++ + A  V+NAL+T+Y K 
Sbjct: 293 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 352

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK------------------------ 302
           G +  A+ +F+ +  ++V+SW  I++G+   G  +K                        
Sbjct: 353 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYV 412

Query: 303 -------PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
                   L+L   MR + + P +YT+  A+A+C  L     G   HA +++ G    + 
Sbjct: 413 HGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNS 472

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A++ MY+  G + +A+     M  +  SVSWNA I+   ++    EA+E F QMV  
Sbjct: 473 AGNALLTMYAKCGAVNDARLVFLVM-PNLDSVSWNAMISALGQHGHGREALELFDQMVAE 531

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  ++ +IL AC+           H+ +V   F                   +E  
Sbjct: 532 GIDPDRISFLTILTACN-----------HAGLVDEGFH-----------------YFESM 563

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +R F      D   +  +I    ++GR  +A  L + M  E   PT S + A+LS C  +
Sbjct: 564 KRDFGISPGED--HYARLIDLLGRSGRIGEARDLIKTMPFE---PTPSIWEAILSGCRTN 618

Query: 536 GLVQDGQKVFESMVK 550
           G ++ G    + + +
Sbjct: 619 GDMEFGAYAADQLFR 633



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C     L+ GR+ HA + +           +L+ MYAKCG +     V   MP LD 
Sbjct: 443 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDS 502

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N +++   ++    +A   F ++    + P+  ++ T+L  C     +DEG   + +
Sbjct: 503 VSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH-YFE 561

Query: 244 TMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDY 300
           +MK  +       +   L+ +  + G + +A  + + +      S W AI++G + +GD 
Sbjct: 562 SMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDM 621

Query: 301 E 301
           E
Sbjct: 622 E 622


>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 193/602 (32%), Positives = 325/602 (53%), Gaps = 17/602 (2%)

Query: 137  RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
            R +  +I K  +  + F+ A     + + G+++    V  +MP  D+ S N +++GY   
Sbjct: 766  RVFEDIIDKNLISWNIFLKA-----FVRFGELERARDVFDEMPKRDVVSWNTMISGYVSF 820

Query: 197  ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAV 255
             LFD AF FF ++    ++P+ +TYST+L+    +S+   GKQ+HA  ++    LS   V
Sbjct: 821  GLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVV 877

Query: 256  SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             N+L+ MY K G+++ A  VF  + + ++ISW ++I    + G     LR   LMR  G 
Sbjct: 878  GNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGY 937

Query: 316  DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             P+++T +  +  C++L++   G    A  I+ G      V +A +D++S    + ++ +
Sbjct: 938  SPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVR 997

Query: 376  QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              +E+ +   SV  NA I+ +  +   E A++ F   +R +    EFT S +L A S+L 
Sbjct: 998  VFEEIYQ-WDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILL 1056

Query: 436  SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
             +    QIHS +VKS  ES+V V SSL+E Y K G  + A + F+++ A D++SWN+MI 
Sbjct: 1057 PVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIM 1116

Query: 496  AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
              + NGR  KA+ +F+++++ G  P   T   VL AC+  GLV +G  +F SM KEYG++
Sbjct: 1117 GLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVI 1176

Query: 556  PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
            P   HY+C+VD++ R GKL+ A+  +  +P +P+  IW  L  AC  + DL+  E ++++
Sbjct: 1177 PAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAER 1236

Query: 616  ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
            ++EL+P  +  Y+ L+  Y   G         + MK K + K  GCSWI + N ++ F  
Sbjct: 1237 VMELEPQSSLPYLVLAQAYEMRGRWESLVRVXRAMKEKGVRKVIGCSWIGIKNHVFVFKE 1296

Query: 676  QNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPAKNKFEC 735
                H     +Y  L+ L+Q+IED G+   +      Y   R     G + L  KN+ EC
Sbjct: 1297 NQLLHIGGKDIYFILRLLIQEIEDDGYASQQ------YDKVRAVGEVGTVLLWVKNE-EC 1349

Query: 736  SR 737
            ++
Sbjct: 1350 AK 1351



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 168/573 (29%), Positives = 287/573 (50%), Gaps = 66/573 (11%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LK 208
           D F    +++ +AK G+++    +  +MP+ +  + N ++ GYA N    +A   F  L 
Sbjct: 103 DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS 162

Query: 209 LDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           L+ ++    + +  +T++  C +L A+D GKQ+HA+ +  +    + + ++L+ +Y KCG
Sbjct: 163 LNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCG 222

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL------------------ 309
            ++ A  V   + + +  S +A+I+G+   G      R+ CL                  
Sbjct: 223 DIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVA 282

Query: 310 -------------MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
                        MR  G+  +  TF   L++C++L     G   HA V K G      +
Sbjct: 283 NNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIII 342

Query: 357 GTAIVDMYS-------------------------------GLGEIWEAKKQLKEMGKSAS 385
            +A+VDMYS                                 G I +A++    M  S S
Sbjct: 343 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTM-PSKS 401

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            +SWN+ I GF +N    EA++ F +M +     D+F+ + ++ AC+ + SL   EQI +
Sbjct: 402 LISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFA 461

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R      E +  + +SL++ Y KCG  E   ++F ++  +D V WNSM+  Y+ NG   +
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIE 521

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ +F++M   G++PT+ TF+ VLSAC H GLV++G+K F +M  +Y I P   HYSCMV
Sbjct: 522 ALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMV 581

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DL  RAG LE A+  I  +P+K    +W  +   C  H +  + + ++K+I++LDP+++ 
Sbjct: 582 DLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSG 641

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
            YV LS +YA       + + RKLM  K+I K+
Sbjct: 642 AYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKD 674



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 222/522 (42%), Gaps = 92/522 (17%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LFN+ P + G++ + +I          G + NG          G   D       ++
Sbjct: 123 ARRLFNEMPWKNGIAWNSMI---------HGYACNGRPKE----AVGLFKD-------LS 162

Query: 108 CYSLESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
              LE      FV+  V+  C+    L+ G++ HA I    V  D  + +SLVN+Y KCG
Sbjct: 163 LNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCG 222

Query: 167 DIKSMVAVVKQMPYLD----------IASC---------------------NCLLAGYAK 195
           DI S   V+  M   D           ASC                     N +++GY  
Sbjct: 223 DIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVA 282

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N    +A   F  +    VQ ++ T++++L+ C +L  ID+G Q+HA   K+ + +   +
Sbjct: 283 NNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIII 342

Query: 256 SNALLTMYIK-------------------------------CGMMEDAESVFEGLVQRNV 284
            +AL+ MY K                               CG ++DA  +F+ +  +++
Sbjct: 343 DSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSL 402

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ISW ++I GF Q+    + L L C M + G+  ++++    +++CAS+ +  +G    A+
Sbjct: 403 ISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFAR 462

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
               G+     + T++VD Y   G +   +K    M KS   V WN+ + G+  N    E
Sbjct: 463 ATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKS-DEVPWNSMLMGYATNGHGIE 521

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG----S 460
           A+  F QM        + T+  +L AC         E+        K + +++ G    S
Sbjct: 522 ALNVFDQMRSVGVQPTDITFVGVLSACD---HCGLVEEGRKWFYAMKLDYHINPGIEHYS 578

Query: 461 SLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG 501
            +++ Y + G  EDA  +  Q+   AD   W+S+++    +G
Sbjct: 579 CMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHG 620



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 149/651 (22%), Positives = 266/651 (40%), Gaps = 163/651 (25%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVA 173
           LD   +   L  C+    +  GR  H L  K+ V      +   L+ MY++C  ++    
Sbjct: 4   LDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           + ++MP  +  S N ++ GY K+    ++   F      D  P+   +S  + I G    
Sbjct: 64  LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELF------DSMPHKDAFSWNVVISG---- 113

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
                                        + K G +E A  +F  +  +N I+W ++I+G
Sbjct: 114 -----------------------------FAKEGNLEVARRLFNEMPWKNGIAWNSMIHG 144

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEY----TFTVA--LASCASLRNSHMGYMFHAQVIK 347
           +  +G   +P   V L ++  ++P E     TF +A  + +C +L     G   HA+++ 
Sbjct: 145 YACNG---RPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK-SASSVS------------------ 388
             +     +G+++V++Y   G+I  A   L  M +  A S+S                  
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261

Query: 389 -----------WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
                      WN+ I+G+  N +  EA+E F+ M R     D  T++S+L ACS L  +
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD----------- 486
               Q+H+ + K  F +++ + S+L++ Y+KC   +DA ++FS L A D           
Sbjct: 322 DQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVY 381

Query: 487 --------------------VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
                               ++SWNSMI  +SQN    +A+ LF +M   G+R    +  
Sbjct: 382 SNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLA 441

Query: 527 AVLSACS-----------------------------------HSGLVQDGQKVFESMVKE 551
            V+SAC+                                     GLV+ G+K+F+ M+K 
Sbjct: 442 GVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKS 501

Query: 552 YGILPEEAHYSCMVDLLGRAGK---LEIALIF--ISNLPIKPTAPIWRPLFAACRCHSDL 606
                +E  ++ M  L+G A     +E   +F  + ++ ++PT   +  + +AC  H  L
Sbjct: 502 -----DEVPWNSM--LMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACD-HCGL 553

Query: 607 ----KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
               +   +  K    ++P     Y  + ++YA AGL  DA    + M +K
Sbjct: 554 VEEGRKWFYAMKLDYHINP-GIEHYSCMVDLYARAGLLEDAMNLIEQMPLK 603



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 76/406 (18%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDA 272
           V  + ++ +  L  C +  +I  G+ LH   +K   L S  ++ N LL MY +C  M +A
Sbjct: 2   VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           + +FE + +RN  SW  +I G+ + G   K L L   M      P++  F+         
Sbjct: 62  QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM------PHKDAFS--------- 106

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
                                      ++  ++  G +  A++   EM    + ++WN+ 
Sbjct: 107 ------------------------WNVVISGFAKEGNLEVARRLFNEM-PWKNGIAWNSM 141

Query: 393 IAGFFRNQKTEEAIEAFSQMVRN--DAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           I G+  N + +EA+  F  +  N  +  C D F  ++++ AC+ L +L   +QIH+RIV 
Sbjct: 142 IHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201

Query: 450 SKFESNVHVGSSLIEAYNKCGSWE-------------------------------DAERV 478
            + E +  +GSSL+  Y KCG  +                               DA R+
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F   +   VV WNSMI  Y  N  A +A+ LF  M  +G++   STF +VLSACS  G++
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
             G +V  + V + G   +    S +VD+  +  + + A    S+L
Sbjct: 322 DQGIQV-HAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDL 366



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 173/366 (47%), Gaps = 37/366 (10%)

Query: 245  MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN--------------------- 283
            +K+ + + T + N  L +Y + G   D+  VFE ++ +N                     
Sbjct: 737  IKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERAR 796

Query: 284  ----------VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
                      V+SW  +I+G+   G ++   R    M++ GI P+ +T++  L+  +S  
Sbjct: 797  DVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSS-- 854

Query: 334  NSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
             +  G   HA +I+ G+ L +  VG +++ MY   G +  A      M +    +SWN+ 
Sbjct: 855  -ACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITM-EELDIISWNSL 912

Query: 393  IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
            I    ++     A+  F  M     + D+FT S+++  CS L  L   EQI +  ++  F
Sbjct: 913  IWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGF 972

Query: 453  ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
             SN  V S+ I+ ++KC   ED+ RVF ++   D V  N+MI +Y+ +G    A+ LF  
Sbjct: 973  LSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVL 1032

Query: 513  MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
             + E +RPT  T   VLSA S    V  G ++  S+V + G+  +    S +V++  + G
Sbjct: 1033 TLRENLRPTEFTLSIVLSAVSILLPVDQGSQI-HSLVVKSGLESDVIVASSLVEMYAKFG 1091

Query: 573  KLEIAL 578
             ++ A+
Sbjct: 1092 LIDSAM 1097



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/537 (22%), Positives = 229/537 (42%), Gaps = 42/537 (7%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +DK  +  V+S C+    LELG +  A  T   +  DQ ++ SLV+ Y KCG ++    +
Sbjct: 435 MDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKL 494

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M   D    N +L GYA N    +A + F ++  + VQP   T+  +L+ C     +
Sbjct: 495 FDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLV 554

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG++     MKL Y     + +   ++ +Y + G++EDA ++ E + ++ +   W++++
Sbjct: 555 EEGRKWF-YAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVL 613

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL-----RNSHMGYMFHAQVI 346
            G   HG+    L      R   +DP      V L+   +      R++ +  + + + I
Sbjct: 614 RGCVAHGN--NILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKI 671

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
            +  +  D  G              E  + L    K  + +     +      +K  E  
Sbjct: 672 PKDTSF-DIAGE-------------EGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECD 717

Query: 407 EAFSQMVRNDAACDEF---------TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           E   + +       EF         T++ +   C  L S         R+ +   + N+ 
Sbjct: 718 ERDQKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLI 777

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
             +  ++A+ + G  E A  VF ++   DVVSWN+MI  Y   G    A   F +M   G
Sbjct: 778 SWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAG 837

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           IRP+  T+  +LS  S +     G+++  SM++    L      + ++ + G+ G ++ A
Sbjct: 838 IRPSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYA 894

Query: 578 L-IFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
             +FI+   +   +  W  L  +C    + +L + +F+  + +   PD   V   ++
Sbjct: 895 FGVFITMEELDIIS--WNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVIT 949



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 162/364 (44%), Gaps = 40/364 (10%)

Query: 118  QFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
            QF +  V++ CS  + LE G +  AL  +     +  V+++ +++++KC  ++  V V +
Sbjct: 941  QFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFE 1000

Query: 177  QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            ++   D   CN +++ YA +   + A   F+     +++P  +T S +L+    L  +D+
Sbjct: 1001 EIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQ 1060

Query: 237  GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
            G Q+H+  +K    S   V+++L+ MY K G+++ A   F  +  R++ISW  +I G   
Sbjct: 1061 GSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAY 1120

Query: 297  HGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGD 354
            +G   K L +   +   G  P+E T    L +C    L +  +  +F +   + G+    
Sbjct: 1121 NGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLS-IFSSMEKEYGVIPAI 1179

Query: 355  FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
                 IVDM S  G++ EA   ++ M    S + W                         
Sbjct: 1180 EHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIW------------------------- 1214

Query: 415  NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                       S+L AC +   L   E++  R+++ + +S++     L +AY   G WE 
Sbjct: 1215 ----------GSLLCACEIYGDLRFTERVAERVMELEPQSSLPY-LVLAQAYEMRGRWES 1263

Query: 475  AERV 478
              RV
Sbjct: 1264 LVRV 1267



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 204/492 (41%), Gaps = 77/492 (15%)

Query: 121 IEVLSYCSREECLELGRR-YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           + VLS C     +E GR+ ++A+     +       + +V++YA+ G ++  + +++QMP
Sbjct: 542 VGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMP 601

Query: 180 Y-LDIASCNCLLAG---YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
              D +  + +L G   +  N L  +     + LD      N   Y  +  I  +    D
Sbjct: 602 LKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLD----PENSGAYVQLSGIYATFE--D 655

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+   AQ  KL Y  K     +              E   EGL      S T  +   K
Sbjct: 656 WGRS--AQVRKLMYDKKIPKDTSFDIA---------GEEGXEGLS-----SETKEVTKMK 699

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q  +    LRLV   + +  D  +  F  A       R + + +     +IK G     F
Sbjct: 700 QRQNL--VLRLVAEKKRE-CDERDQKFMAA-------RRTLLEF---DMLIKVGFNTHTF 746

Query: 356 VGTAIVDMYSGL-------------------------------GEIWEAKKQLKEMGKSA 384
           +G   +D+YS L                               GE+  A+    EM K  
Sbjct: 747 LGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKR- 805

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             VSWN  I+G+      ++A   FS+M +       FTYS++L   S + S    +QIH
Sbjct: 806 DVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL---SFVSSACRGKQIH 862

Query: 445 SRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           + ++++  + SNV VG+SLI  Y K G  + A  VF  +   D++SWNS+I +  ++G  
Sbjct: 863 ASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQ 922

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
             A+  F  M   G  P   T   V++ CS+   ++ G+++F   ++  G L      S 
Sbjct: 923 NLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIR-VGFLSNSIVSSA 981

Query: 564 MVDLLGRAGKLE 575
            +DL  +  +LE
Sbjct: 982 SIDLFSKCNRLE 993


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/695 (29%), Positives = 349/695 (50%), Gaps = 39/695 (5%)

Query: 48   ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF---PDGFIDDGCSNTV 104
            A QLF+  P+R  +S + +I         +  S NG+S   +SF    +   ++G    +
Sbjct: 596  ALQLFDIMPERNLVSWNSMI---------RVFSDNGFS--EESFLLLGEMMEENGDGAFM 644

Query: 105  PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
            P          D   ++ VL  C+RE  + LG+  H    K  +  +  +  +L++MY+K
Sbjct: 645  P----------DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 694

Query: 165  CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYS 222
            CG I +   + K     ++ S N ++ G++        F    ++   G DV+ +  T  
Sbjct: 695  CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 754

Query: 223  TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
              + +C   S +   K+LH  ++K +++    V+NA +  Y KCG +  A+ VF G+  +
Sbjct: 755  NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 814

Query: 283  NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
             V SW A+I G  Q  D    L     M+  G+ P+ +T    L++C+ L++  +G   H
Sbjct: 815  TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 874

Query: 343  AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
              +I+  +    FV  +++ +Y   GE+   +     M +  S VSWN  I G+ +N   
Sbjct: 875  GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFP 933

Query: 403  EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
            + A+  F QMV         +   +  ACSLLPSL    + H+  +K   E +  +  SL
Sbjct: 934  DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 993

Query: 463  IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
            I+ Y K GS   + +VF+ L      SWN+MI  Y  +G A++AI LFE+M   G  P +
Sbjct: 994  IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 1053

Query: 523  STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFI 581
             TFL VL+AC+HSGL+ +G +  + M   +G+ P   HY+C++D+LGRAG+L+ AL +  
Sbjct: 1054 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 1113

Query: 582  SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
              +  +    IW+ L ++CR H +L+M E ++ ++ EL+P+    YV LSN+YA  G   
Sbjct: 1114 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 1173

Query: 642  DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            D  + R+ M    + K+ GCSWIE+  K++ F    +      ++      L  +I  +G
Sbjct: 1174 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 1233

Query: 702  H-----------TDNEKEDRVLYHSERLAVGFGLI 725
            +           ++ EK +++  HSE+LA+ +GLI
Sbjct: 1234 YRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLI 1268



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 224/450 (49%), Gaps = 15/450 (3%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           LL ++ +  +L    + + +E+GR+ H L++  T +  D  +   ++ MYA CG      
Sbjct: 436 LLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSR 495

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSL 231
            V   +   ++   N +++ Y++N L+D+    F+++    D+ P+H+TY  ++  C  +
Sbjct: 496 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 555

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S +  G  +H   +K   +    V NAL++ Y   G + DA  +F+ + +RN++SW ++I
Sbjct: 556 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 615

Query: 292 NGFKQHGDYEKPLRLVCLMREDGID----PNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
             F  +G  E+   L+  M E+  D    P+  T    L  CA  R   +G   H   +K
Sbjct: 616 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 675

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             +     +  A++DMYS  G I  A+   K M  + + VSWN  + GF     T    +
Sbjct: 676 LRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFD 734

Query: 408 AFSQMVRN--DAACDEFTYSSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
              QM+    D   DE T  + +  C   S LPSL   +++H   +K +F  N  V ++ 
Sbjct: 735 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---KELHCYSLKQEFVYNELVANAF 791

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           + +Y KCGS   A+RVF  + +  V SWN++I  ++Q+   R ++    +M + G+ P +
Sbjct: 792 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 851

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEY 552
            T  ++LSACS    ++ G++V   +++ +
Sbjct: 852 FTVCSLLSACSKLKSLRLGKEVHGFIIRNW 881



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 15/273 (5%)

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA------LASCASLRNSHMGYMFHAQ 344
           I+ F + GD +K  R V     D    ++    V       L +    ++  MG   H Q
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-Q 463

Query: 345 VIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
           ++     L   D + T I+ MY+  G   +++     + +S +   WNA I+ + RN+  
Sbjct: 464 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-RSKNLFQWNAVISSYSRNELY 522

Query: 403 EEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           +E +E F +M+   D   D FTY  ++KAC+ +  +     +H  +VK+    +V VG++
Sbjct: 523 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA 582

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE----G 517
           L+  Y   G   DA ++F  +   ++VSWNSMI+ +S NG + ++ +L  +M+ E     
Sbjct: 583 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 642

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             P  +T + VL  C+    +  G+ V    VK
Sbjct: 643 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 675


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/565 (33%), Positives = 314/565 (55%), Gaps = 29/565 (5%)

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y  ++L   +FS F  +  + V PN + + ++L     L        LHA T++L   S 
Sbjct: 85  YTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSD 144

Query: 253 TAVSNALLTMYIK---CGMMEDA------------ESVFEGLVQRNVISWTAIINGFKQH 297
             ++NAL+  Y K    G + D             + VF+ +  R+V+SW  +I GF Q+
Sbjct: 145 LYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQN 204

Query: 298 GDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           G Y + L +V  M ++G + P+ +T +  L   A   + + G   H   ++ G     F+
Sbjct: 205 GMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFI 264

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           G++++DMY+    + E   +   +     ++SWN+ IAG  +N + +  +  F +M++ +
Sbjct: 265 GSSLIDMYAKCNRL-ECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKEN 323

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
                 ++SS++ AC+ L +L+   Q+H  IV+  F+ N  + SSL++ Y KCG+ + A 
Sbjct: 324 VKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMAR 383

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF ++   D+V+W ++I   + +G A  A+ LFE M+ +G+RP    F+AVL+ACSH+G
Sbjct: 384 YVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAG 443

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL-PIKPTAPIWRP 595
           LV +G + F SM +++GI P   HY+ + DLLGRAG+LE A  FISN+  ++PT  +W  
Sbjct: 444 LVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSI 503

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L AACR H  +++AE +  ++L +D ++   YV +SN+Y+ A    DA   R  M+ K +
Sbjct: 504 LLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGL 563

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDN 705
            K P CSWIEV N+++ F + +KSH    K+ + L  L++Q+E  G+           D 
Sbjct: 564 KKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDE 623

Query: 706 EKEDRVLY-HSERLAVGFGLISLPA 729
           E +  +L+ HSERLA+ +G+IS  A
Sbjct: 624 ELKRELLHNHSERLAIAYGIISTTA 648



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/432 (22%), Positives = 192/432 (44%), Gaps = 49/432 (11%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD---------------IKSMVAVVKQM 178
           +L    HA   +  +  D ++  +L+N YAK  +               I  +  V   M
Sbjct: 127 KLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMM 186

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           P  D+ S N ++AG+A+N ++ +A     ++     ++P+ +T S++L I      +++G
Sbjct: 187 PVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKG 246

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K++H   ++  +     + ++L+ MY KC  +E +   F  L +++ ISW +II G  Q+
Sbjct: 247 KEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQN 306

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G++++ L     M ++ + P   +F+  + +CA L    +G   H  +++ G    +F+ 
Sbjct: 307 GEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIA 366

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +++VDMY+  G I  A+     + K    V+W A I G   +    +A+  F  M+ +  
Sbjct: 367 SSLVDMYAKCGNIKMARYVFDRIDKR-DMVAWTAIIMGCAMHGHALDAVSLFENMLEDGV 425

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
                 + ++L ACS           H+ +V   +                   +   ER
Sbjct: 426 RPCYVAFMAVLTACS-----------HAGLVDEGWR-----------------YFNSMER 457

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F    A  +  + ++     + GR  +A      M   G++PT S +  +L+AC     
Sbjct: 458 DFG--IAPGLEHYAAVADLLGRAGRLEEAYDFISNM--RGVQPTGSVWSILLAACRAHKS 513

Query: 538 VQDGQKVFESMV 549
           V+  +KV + ++
Sbjct: 514 VELAEKVLDKLL 525



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 12/289 (4%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    +    GD F+ +SL++MYAKC  ++  +     +P  D  S N ++AG  +
Sbjct: 246 GKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQ 305

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N  FD+   FF ++   +V+P   ++S+++  C  L+A+  G+QLH   ++L +     +
Sbjct: 306 NGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFI 365

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +++L+ MY KCG ++ A  VF+ + +R++++WTAII G   HG     + L   M EDG+
Sbjct: 366 ASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGV 425

Query: 316 DPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
            P    F   L +C     SH G +      F++     G+A G     A+ D+    G 
Sbjct: 426 RPCYVAFMAVLTAC-----SHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGR 480

Query: 370 IWEAKKQLKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           + EA   +  M G   +   W+  +A    ++  E A +   +++  D+
Sbjct: 481 LEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDS 529



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 18/229 (7%)

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +W++ I  +  +     +  +F+ M       +   + S+LKA +LL        +H+  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 448 VKSKFESNVHVGSSLIEAYNK---CGSWED------------AERVFSQLTAADVVSWNS 492
           V+   +S++++ ++LI  Y K    G   D             ++VF  +   DVVSWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 493 MIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +I  ++QNG   +A+ +  +M   G ++P + T  ++L   +    V  G+++    V+ 
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
            G   +    S ++D+  +  +LE +L     LP +  A  W  + A C
Sbjct: 257 -GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGC 303



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 5/183 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    L LGR+ H  I +     ++F+ +SLV+MYAKCG+IK    V  ++   D
Sbjct: 334 VIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRD 393

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   ++ G A +     A S F  +    V+P +  +  +L  C     +DEG + + 
Sbjct: 394 MVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWR-YF 452

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHG 298
            +M+  +     + +  A+  +  + G +E+A      +  VQ     W+ ++   + H 
Sbjct: 453 NSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHK 512

Query: 299 DYE 301
             E
Sbjct: 513 SVE 515


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 189/623 (30%), Positives = 320/623 (51%), Gaps = 14/623 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V+ VL  C+RE  + +G+  H    K ++  +  V  +L++MY+K G I     + 
Sbjct: 275 DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIF 334

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSA 233
           K     ++ S N ++ G++        F    ++     DV+ +  T    + +C   S 
Sbjct: 335 KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV 394

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +   K+LH  ++K +++    ++NA +  Y KCG +  A+ VF G+  + + SW A+I G
Sbjct: 395 LPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG 454

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q  D    L     M+  G+ P+ +T    L++C+ L++  +G   H  +I+  +   
Sbjct: 455 YAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 514

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  +++ +Y   GE+   +     M +  S VSWN  I G  +N   E A+  F QMV
Sbjct: 515 LFVYLSVLSLYIHCGELCTVQVLFDAM-EDNSLVSWNTVITGHLQNGFPERALGLFRQMV 573

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                    +  ++  ACSLLPSL    + H+  +K   E N  +  S+I+ Y K G+  
Sbjct: 574 LYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAIT 633

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            + +VF+ L      SWN+MI  Y  +GRA++AI LFE+M   G  P + TFL VL+AC+
Sbjct: 634 QSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACN 693

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGL+ +G +  + M   +G+ P   HY+C++D+LGRAG+L+ AL   + +  +P   IW
Sbjct: 694 HSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIW 753

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L + CR H +L+M E ++ ++  L+P+    YV LSN+YA  G   D  + R+ MK  
Sbjct: 754 NSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEM 813

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------- 702
            + K+ GCSWIE+  K++ F    +      ++      L  +I  +G+           
Sbjct: 814 SLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDL 873

Query: 703 TDNEKEDRVLYHSERLAVGFGLI 725
           ++ EK +++  HSE+LA+ +GLI
Sbjct: 874 SEEEKIEQLRGHSEKLAITYGLI 896



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 235/512 (45%), Gaps = 33/512 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    + +G   H L+ KT +  D FV  +LV+ Y   G +   + +   MP  +
Sbjct: 193 VIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERN 252

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++  ++ N   D AF            P+  T  T+L +C     I  GK +H 
Sbjct: 253 LVSWNSMIRVFSDNG-DDGAF-----------MPDVATVVTVLPVCAREREIGVGKGVHG 300

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL    +  V+NAL+ MY K G + D++ +F+    +NV+SW  ++ GF   GD   
Sbjct: 301 WAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHG 360

Query: 303 PLRLV--CLMREDGIDPNEYTFTVALASC------ASLRNSHMGYMFHAQVIKRGMALGD 354
              L+   L   + +  +E T   A+  C       SL+        H   +K+     +
Sbjct: 361 TFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKE------LHCYSLKQEFVYDE 414

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +  A V  Y+  G +  A++    + +S +  SWNA I G+ ++     +++A  QM  
Sbjct: 415 LLANAFVASYAKCGSLSYAQRVFHGI-RSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKN 473

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D FT  S+L ACS L SL   +++H  I+++  E ++ V  S++  Y  CG    
Sbjct: 474 SGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 533

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
            + +F  +    +VSWN++I  + QNG   +A+ LF +MV+ GI+P   + + V  ACS 
Sbjct: 534 VQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSL 593

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
              ++ G++     +K   +L + A  +C ++D+  + G +  +    + L  K  A  W
Sbjct: 594 LPSLRLGREAHAYALKH--LLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAAS-W 650

Query: 594 RPLFAACRCHSDLKMA--EFISKQILELDPDD 623
             +      H   K A   F   Q    +PDD
Sbjct: 651 NAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDD 682



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/631 (23%), Positives = 282/631 (44%), Gaps = 72/631 (11%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMV 172
           LL ++ +  +L    + + +E+GR+ H L++  T +  D  +   ++ MYA CG      
Sbjct: 81  LLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSR 140

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSL 231
           +    +   ++   N +++ Y++N L+ +    F+K+     + P+++T+  ++  C  +
Sbjct: 141 SAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGI 200

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S +  G  +H   +K   +    V NAL++ Y   G + DA  +F+ + +RN++SW ++I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI 260

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             F  +GD            +    P+  T    L  CA  R   +G   H   +K  + 
Sbjct: 261 RVFSDNGD------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLD 308

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               V  A++DMYS  G I +++   K +  + + VSWN  + GF          +   Q
Sbjct: 309 KELVVNNALMDMYSKWGCIIDSQMIFK-LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQ 367

Query: 412 MV--RNDAACDEFTYSSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           M+    D   DE T  + +  C   S+LPSL   +++H   +K +F  +  + ++ + +Y
Sbjct: 368 MLAGSEDVKADEVTILNAVPVCFDESVLPSL---KELHCYSLKQEFVYDELLANAFVASY 424

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCGS   A+RVF  + +  + SWN++I  Y+Q+   R ++    +M   G+ P N T  
Sbjct: 425 AKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVC 484

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEY---------GILPEEAHYS--CMVDLLGRA---- 571
           ++LSACS    ++ G++V   +++ +          +L    H    C V +L  A    
Sbjct: 485 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDN 544

Query: 572 ---------------GKLEIALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAE--- 610
                          G  E AL     +    I+P       +F AC     L++     
Sbjct: 545 SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAH 604

Query: 611 -FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
            +  K +LE   D+A +  ++ +MYA+ G  A  +  +    +KE S     SW    N 
Sbjct: 605 AYALKHLLE---DNAFIACSIIDMYAKNG--AITQSSKVFNGLKEKS---AASW----NA 652

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
           +   +  +    E  K++E++++  +  +D+
Sbjct: 653 MIMGYGMHGRAKEAIKLFEEMQRTGRNPDDL 683



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 136/283 (48%), Gaps = 3/283 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   V  +LS CS+ + L LG+  H  I +  +  D FV  S++++Y  CG++ ++  
Sbjct: 477 LPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQV 536

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +   M    + S N ++ G+ +N   ++A   F ++    +QP   +  T+   C  L +
Sbjct: 537 LFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPS 596

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  G++ HA  +K        ++ +++ MY K G +  +  VF GL +++  SW A+I G
Sbjct: 597 LRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMG 656

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  HG  ++ ++L   M+  G +P++ TF   L +C      H G  +  Q +K    L 
Sbjct: 657 YGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQ-MKSSFGLK 715

Query: 354 DFVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +     ++DM    G++  A +   EM +      WN+ ++
Sbjct: 716 PNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLS 758



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 25/351 (7%)

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA------LASCASLRNSHMGYMFHAQ 344
           I+ F + GD +K  R+V     D    ++    V       L +    ++  MG   H  
Sbjct: 50  ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109

Query: 345 VI-KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           V     +   D + T I+ MY+  G   +++     + +S +   WNA I+ + RN+   
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDAL-RSKNLFQWNAVISSYSRNELYH 168

Query: 404 EAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           E +E F +M+ +     D FT+  ++KAC+ +  +     +H  +VK+    ++ VG++L
Sbjct: 169 EVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNAL 228

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           +  Y   G   DA ++F  +   ++VSWNSMI+ +S NG                  P  
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD------------GAFMPDV 276

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG-KLEIALIFI 581
           +T + VL  C+    +  G+ V    VK   +  E    + ++D+  + G  ++  +IF 
Sbjct: 277 ATVVTVLPVCAREREIGVGKGVHGWAVK-LSLDKELVVNNALMDMYSKWGCIIDSQMIF- 334

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
             L        W  +        D+     + +Q+L    D  A  VT+ N
Sbjct: 335 -KLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILN 384


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/659 (31%), Positives = 335/659 (50%), Gaps = 90/659 (13%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKL-DGID 213
           SLV  YA  G + + V+    +P    D    N +++ YA+ +    A + F  L     
Sbjct: 93  SLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGS 152

Query: 214 VQPNHYTYSTMLAICGSLS--AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME- 270
           ++P+ Y+++ +L+  G L   ++    QL    +K       +VSNAL+ +Y+KC  +E 
Sbjct: 153 LRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEA 212

Query: 271 --DAESVFEGLVQRNVISWTAIINGFKQHGD-------YEK------------------- 302
             DA  V + +  ++ ++WT ++ G+ + GD       +E+                   
Sbjct: 213 TRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHS 272

Query: 303 -----PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG------MA 351
                   L   M  + +  +E+TFT  L++CA+      G   H Q+ +         A
Sbjct: 273 GMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAA 332

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF--------------- 396
           L   V  A+V +YS  G I  A++    M KS   VSWN  ++G+               
Sbjct: 333 LP--VNNALVTLYSKCGNIAVARRIFDNM-KSKDVVSWNTILSGYVESSCLDKAVEVFEE 389

Query: 397 --FRNQKT--------------EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
             ++N+ +              E+A++ F++M   D    ++TY+  + AC  L SL   
Sbjct: 390 MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHG 449

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +Q+H  +V+  FE +   G++LI  Y +CG+ ++A  +F  +   D VSWN+MI A  Q+
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQH 509

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G  R+A+ LF++MV EGI P   +FL VL+AC+HSGLV +G + FESM +++GI+P E H
Sbjct: 510 GHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDH 569

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y+ ++DLLGRAG++  A   I  +P +PT  IW  + + CR   D+++    + Q+ ++ 
Sbjct: 570 YTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMT 629

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P     Y+ LSN Y+ AG   DA   RKLM+ + + KEPGCSWIE  NK++ F   +  H
Sbjct: 630 PQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKH 689

Query: 681 SEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
            E  KVY+ L+ +  ++  +G+  +           +KE  +  HSERLAVGFGL+ LP
Sbjct: 690 PEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLP 748



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 195/435 (44%), Gaps = 69/435 (15%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D     ++V  Y + GD+ +  +V +++        N +++GY  + +  +AF  F ++ 
Sbjct: 227 DALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMV 286

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ--YLSKTA--VSNALLTMYIKC 266
              V  + +T++++L+ C +      GK +H Q  +LQ  ++ + A  V+NAL+T+Y KC
Sbjct: 287 LERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKC 346

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQ------------------------------ 296
           G +  A  +F+ +  ++V+SW  I++G+ +                              
Sbjct: 347 GNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYV 406

Query: 297 HGDY-EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           HG + E  L+L   MR + + P +YT+  A+++C  L +   G   H  +++ G    + 
Sbjct: 407 HGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNS 466

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A++ MY+  G + EA      M  +  SVSWNA I+   ++    EA+E F +MV  
Sbjct: 467 AGNALITMYARCGAVKEANLMFLVM-PNIDSVSWNAMISALGQHGHGREALELFDRMVAE 525

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  ++ ++L AC+           HS +V   F+                  +E  
Sbjct: 526 GIYPDRISFLTVLTACN-----------HSGLVDEGFQ-----------------YFESM 557

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +R F  +   D   +  +I    + GR  +A  L + M  E   PT S + A+LS C  S
Sbjct: 558 KRDFGIIPGED--HYTRLIDLLGRAGRIGEARDLIKTMPFE---PTPSIWEAILSGCRTS 612

Query: 536 GLVQDGQKVFESMVK 550
           G ++ G    + + K
Sbjct: 613 GDMELGAHAADQLFK 627



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 41/271 (15%)

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSA-SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           T++V  Y+  G +  A      + ++   +V  NA I+ + R      A+  F  ++ + 
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 417 A-ACDEFTYSSILKACSLLPSLAT--CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
           +   D+++++++L A   LP+++   C Q+   ++KS     + V ++L+  Y KC + E
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 474 ---DAERVFSQLTAADV-------------------------------VSWNSMIKAYSQ 499
              DA +V  ++   D                                V WN+MI  Y  
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEE 558
           +G   +A  LF +MV+E +     TF +VLSAC+++G    G+ V   + + +   +PE 
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331

Query: 559 AH--YSCMVDLLGRAGKLEIALIFISNLPIK 587
           A    + +V L  + G + +A     N+  K
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSK 362



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 4/181 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +S C     L+ G++ H  + +    G      +L+ MYA+CG +K    +   MP +D 
Sbjct: 437 ISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDS 496

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N +++   ++    +A   F ++    + P+  ++ T+L  C     +DEG Q + +
Sbjct: 497 VSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ-YFE 555

Query: 244 TMKLQY--LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDY 300
           +MK  +  +        L+ +  + G + +A  + + +      S W AI++G +  GD 
Sbjct: 556 SMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDM 615

Query: 301 E 301
           E
Sbjct: 616 E 616


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/571 (32%), Positives = 300/571 (52%), Gaps = 12/571 (2%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VPV   SL         + +L  C  E     G   H L+ K  +     +  +LV+MY 
Sbjct: 216 VPVNVASL---------VSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYG 266

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K GD++S + V   M   +  S N  +  +A     +     F  +   DV P   T S+
Sbjct: 267 KFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSS 326

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L     L     GK+LH  +++    S   ++N L+ MY K G  E A ++FE +  RN
Sbjct: 327 LLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRN 386

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SW A+I    Q+G   +  RLV  M+++G  PN +T    L +C+ + +  MG   HA
Sbjct: 387 VVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHA 446

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             I+R +    FV  A++D+Y+  G++  A+       K    VS+N  I G+ ++Q   
Sbjct: 447 WSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDG--VSYNTLIVGYSQSQCCF 504

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           E++  F QM       D  ++   L ACS L +    ++IH  +VK   +S+  + +SL+
Sbjct: 505 ESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLL 564

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y K G  + A ++F+++T  DV SWN+MI  Y  +G+   A  LF+ M  +GI   + 
Sbjct: 565 DVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHV 624

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           +++AVLS CSH GLV  G+K F  M+ +  I P++ HY+CMVDLLGRAG+L  +   I N
Sbjct: 625 SYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRN 683

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P +  + +W  L  +CR H D+++A   ++ + EL P+++  Y  L NMY+E+G+  +A
Sbjct: 684 MPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEA 743

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
              +KLMK +++ K P  SW++  NK+  F 
Sbjct: 744 NGVKKLMKSRKVQKNPAYSWVQSGNKLQAFL 774



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 230/490 (46%), Gaps = 14/490 (2%)

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
           A + +  +  D F   +LV  YA CG       V  +MP  D+ S N L++    N + +
Sbjct: 143 AALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLE 202

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL--HAQTMKLQYLSKTAVSNA 258
            A    + +    V  N  +  ++L  CG+    DEG  L  H   +K    S   + NA
Sbjct: 203 DAKRAVVGMMRSGVPVNVASLVSILPACGTER--DEGFGLCVHGLVLKFGLNSVVNLGNA 260

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY K G +E +  VF G+ ++N +SW + I  F   G +E  L +  LM E  + P 
Sbjct: 261 LVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPG 320

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
             T +  L +   L   H+G   H   I+R +    F+   ++DMY+  G   E    + 
Sbjct: 321 SVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFG-CSEKASAIF 379

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E  +  + VSWNA IA   +N    EA     +M +N    + FT  ++L ACS + S+ 
Sbjct: 380 ENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVK 439

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             +QIH+  ++    S++ V ++LI+ Y KCG    A  +F + +  D VS+N++I  YS
Sbjct: 440 MGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYS 498

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           Q+    +++ LF++M + GI     +F+  LSACS+    + G+++   +VK   +L   
Sbjct: 499 QSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR--LLDSH 556

Query: 559 AHYS-CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
              +  ++D+  + G L+ A    + +  K  A  W  +      H  + +A     ++ 
Sbjct: 557 PFLANSLLDVYTKGGMLDTASKIFNRITQKDVAS-WNTMILGYGMHGQIDVA----FELF 611

Query: 618 ELDPDDAAVY 627
           +L  DD   Y
Sbjct: 612 DLMKDDGIEY 621



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 23/248 (9%)

Query: 342 HAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRN 399
           HA  +  G     F +  A++  Y+ L +I  A   L+    +  S+  WN+        
Sbjct: 34  HAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASA 93

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTY---SSILKACSLLPSLATCEQIHSRIVKSK-FESN 455
               EA+  +++MVR+    D+ T+        A +     A   ++H+  ++     ++
Sbjct: 94  ALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLAD 153

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR---ARKAIILFEK 512
           V  G++L+  Y  CG   DA RVF ++ A DVVSWNS++ A   NG    A++A++    
Sbjct: 154 VFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVV---G 210

Query: 513 MVVEGIRPTNSTFLAVLSACSHS-----GLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           M+  G+    ++ +++L AC        GL   G      +V ++G+       + +VD+
Sbjct: 211 MMRSGVPVNVASLVSILPACGTERDEGFGLCVHG------LVLKFGLNSVVNLGNALVDM 264

Query: 568 LGRAGKLE 575
            G+ G LE
Sbjct: 265 YGKFGDLE 272


>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 699

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 207/708 (29%), Positives = 367/708 (51%), Gaps = 63/708 (8%)

Query: 10  LINTSSFTFPYPVVEQVKPKKCNHRKTVEVKEPFAS------YSAC-------QLFNKSP 56
           LI TS  T PY     ++   C   K+  + + + S      YS C       QLF+K P
Sbjct: 7   LIRTSHITLPY-----LQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMP 61

Query: 57  KRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLD 116
           +R  +S + +I +GY+N  +   +                     N + V+ ++     D
Sbjct: 62  QRDTVSWNAVI-SGYVNTADLDSTWQ-----------------LLNAMRVSGHAF----D 99

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
                  L   +R + LELG++ H+++ K  +  + F  ++L++MYAKCG +   + V +
Sbjct: 100 NHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFR 159

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAI 234
            MP  +  S N L+AGY++    D AF      +L+G+ +     T S +L +   +   
Sbjct: 160 YMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDG--TVSPLLTLLDGVRFY 217

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ---RNVISWTAII 291
               QLH + +K    +   V NA++T Y +C  ++DAE VF G V    R++++W +++
Sbjct: 218 SLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSML 277

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
             +  H        +   M+  G +P++Y++T  ++ C+   +   G   H  VIKRG  
Sbjct: 278 AAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAE 337

Query: 352 LGDFVGTAIVDMYSGLGE--IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +   V  A++ MY G     + +A +    M       +WN+ +AG+ +  ++E+A+  F
Sbjct: 338 VSVPVSNALIAMYLGFDNRCMEDALRIFFSM-DVKDCCTWNSVLAGYVQVGRSEDALRLF 396

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            Q+       D++T+S++++ CS L +L   +Q+H   +K  F++N +VG          
Sbjct: 397 VQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVG---------- 446

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
              +DA++ F   +  + + WNS+I  Y+Q+G+   A+ LF  M  + ++P + TF+AVL
Sbjct: 447 ---KDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVL 503

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH+GLV++G+K+ +SM  ++GI     HY+C VDL GRAG LE     +  +P +P 
Sbjct: 504 TACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVETMPFEPD 563

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           A + R L  ACR   ++++A  ++K +L L+P+D + YV LS++Y    +  +     +L
Sbjct: 564 AMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDEKASVTRL 623

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI 697
           M+ + + K PG SWIEV NK++ F +++ SH +  ++YE L QL + I
Sbjct: 624 MRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELLLQLKEGI 671


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 183/522 (35%), Positives = 294/522 (56%), Gaps = 16/522 (3%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y  +L  C    A+ +G+++HA  +K +YL  T +   LL  Y KC  +EDA  V + 
Sbjct: 53  HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHM 337
           + ++NV+SWTA+I+ + Q G   + L +   +MR DG  PNE+TF   L SC       +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGL 171

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   H  ++K       FVG++++DMY+  G+I EA+ ++ E       VS  A IAG+ 
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR-EIFECLPERDVVSCTAIIAGYA 230

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +    EEA+E F ++     + +  TY+S+L A S L  L   +Q H  +++ +      
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + +SLI+ Y+KCG+   A R+F  +     +SWN+M+  YS++G  R+ + LF  M  E 
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350

Query: 518 -IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLE 575
            ++P   T LAVLS CSH  +   G  +F+ MV  EYG  P   HY C+VD+LGRAG+++
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A  FI  +P KPTA +   L  ACR H  + + E + ++++E++P++A  YV LSN+YA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
            AG  AD    R +M  K ++KEPG SWI+    ++ F + +++H    +V  K+K++  
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 530

Query: 696 QIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           +++  G+            + +KE  +L HSE+LA+ FGLI+
Sbjct: 531 KMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIA 572



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 213/454 (46%), Gaps = 40/454 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C  +  L  G+R HA + KT      ++   L+  Y KC  ++    V+ +MP  +
Sbjct: 58  LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   +++ Y++     +A + F ++   D +PN +T++T+L  C   S +  GKQ+H 
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  Y S   V ++LL MY K G +++A  +FE L +R+V+S TAII G+ Q G  E+
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   +  +G+ PN  T+   L + + L     G   H  V++R +     +  +++D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--D 420
           MYS  G +  A++    M +  +++SWNA + G+ ++    E +E F +++R++     D
Sbjct: 298 MYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPD 355

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T  ++L  CS           H R+  +    N+  G    E   K G+         
Sbjct: 356 AVTLLAVLSGCS-----------HGRMEDTGL--NIFDGMVAGEYGTKPGTEH------- 395

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                    +  ++    + GR  +A    ++M     +PT     ++L AC     V  
Sbjct: 396 ---------YGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDI 443

Query: 541 GQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGK 573
           G+ V   +++   I PE A +Y  + +L   AG+
Sbjct: 444 GESVGRRLIE---IEPENAGNYVILSNLYASAGR 474


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 191/619 (30%), Positives = 331/619 (53%), Gaps = 22/619 (3%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            +L  C   + L+ GR  H LITK+ +  +  V  SL++MYA+ G  +    V   MP  D
Sbjct: 458  LLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARD 517

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            + S N ++A + ++  +  A    +++       N+ T++T L+ C +L  +   K +HA
Sbjct: 518  LISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHA 574

Query: 243  QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +         + N L+TMY K G+M++A+ V + + +R+V++W A+I G     D   
Sbjct: 575  FVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNA 634

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCAS----LRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++   LMR +G+  N  T    L +C S    L++   G   HA ++  G  L  +V +
Sbjct: 635  TIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKH---GMPIHAHIVVAGFELDTYVQS 691

Query: 359  AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            +++ MY+  G++      + ++  + +S +WNA  +        EEA++  ++M  +   
Sbjct: 692  SLITMYAQCGDL-NTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVD 750

Query: 419  CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             D+F++S  L     L  L   +Q+HS I+K  FE + +V ++ ++ Y KCG  +D  R+
Sbjct: 751  LDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRI 810

Query: 479  FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
                      SWN +I A +++G  R+A   F +M+  G++P + TF+++LSACSH GLV
Sbjct: 811  LPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLV 870

Query: 539  QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
             +G   F SM  E+G+     H  C++DLLGR+G+L  A  FI  +P+ P   +WR L A
Sbjct: 871  DEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLA 930

Query: 599  ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
            AC+ H +L++    + ++ EL+  D + YV  SN+ A      D E  RK M+ + + K+
Sbjct: 931  ACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKK 990

Query: 659  PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKE 708
            P CSWI++ NK+  F   ++ H +  ++Y KL++L +   + GH          TD E++
Sbjct: 991  PACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQK 1050

Query: 709  DRVLY-HSERLAVGFGLIS 726
            +  L+ HSER+A+ FGLI+
Sbjct: 1051 EHNLWNHSERIALAFGLIN 1069



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 227/475 (47%), Gaps = 11/475 (2%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G+  HAL  K  +  + F T +LVNMY+K G IK    V  +M   + AS N +++G+ 
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYLSKT 253
           +   + +A  FF  +    V P+ Y  ++M+  C     + EG +Q+H   +K   +S  
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V  +LL  Y   G + +A  +FE + + N++SWT+++  +  +G  ++ L +   +R +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWE 372
           G+     T    + +C    +  MGY     VIK G+      V  +++ M+     + E
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A +    M +   ++SWN+ I     N + EE++  F  M R     D  T S++L AC 
Sbjct: 405 ASRVFNNM-QERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
               L     +H  I KS  ESNV V +SL+  Y + GS EDAE VF  + A D++SWNS
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           M+ ++ ++G+   AI+L  +M+         TF   LSAC +     +  K+  + V  +
Sbjct: 524 MMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN----LEKLKIVHAFVIHF 579

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            +       + +V + G+ G ++ A      +P +     W  L      H+D K
Sbjct: 580 AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVT-WNALIGG---HADDK 630



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 3/271 (1%)

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           + +   ++G   HA  +K  +    F    +V+MYS  G I  A+    +M    +  SW
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKM-YDRNDASW 216

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQIHSRIV 448
           N  I+GF R     +A++ F  M  N      +  +S++ AC     +     QIH  +V
Sbjct: 217 NNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVV 276

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           K    SNV VG+SL+  Y   GS  +A ++F ++   ++VSW S++  Y+ NG  ++ + 
Sbjct: 277 KCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLN 336

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           ++  +   G+  T +T   V+  C   G    G ++   ++K        +  + ++ + 
Sbjct: 337 IYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMF 396

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           G    +E A    +N+  + T   W  +  A
Sbjct: 397 GNYDSVEEASRVFNNMQERDTIS-WNSIITA 426


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 289/547 (52%), Gaps = 3/547 (0%)

Query: 119 FVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           FV+ + L  C R      G R H    K     D FV  SLV+MYAK GD++    V ++
Sbjct: 134 FVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFER 192

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           +P  ++ S   +L+G  +N         F K+   +V P+ YT +T++  C +L  + +G
Sbjct: 193 IPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQG 252

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + +H   +K   +S + +S ALL MY+KCG +EDA+ VF+ L   +++ WT +I G+ Q+
Sbjct: 253 RWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQN 312

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G+    LRL    +   I PN  T    L++ A LR+  +G   H   +K G+     V 
Sbjct: 313 GNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVV 372

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A+VDMY+    + EA +    +  +   V+WN+ ++G+  N    +A+  F QM     
Sbjct: 373 NALVDMYAKCQAVSEANRIFGSI-SNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGP 431

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
           + D  +    L A   L  L   +  H   VK  F SN++V ++L+  YNKCG    A R
Sbjct: 432 SPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARR 491

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++   + V+W +MI  Y   G +  +I LF +M+ +G+ P +  F ++LS CSH+G+
Sbjct: 492 VFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGM 551

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V   ++ F+SM + + I P   HY+CMVD+L RAG LE AL FI N+P++    +W    
Sbjct: 552 VTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFL 611

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
             C  HS L+  E   K+++ L P+   +YV +SN+Y   G+   ++  R+ M+ K + K
Sbjct: 612 HGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVK 671

Query: 658 EPGCSWI 664
            PG S I
Sbjct: 672 LPGYSSI 678


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 182/544 (33%), Positives = 310/544 (56%), Gaps = 5/544 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  V+S C R   +    + HA + K+    D  V A+L++MY+K GDI     V + + 
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413

Query: 180 YLDIAS-CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            +   +  N ++  ++++    +A   F ++    ++ + ++  ++L++   L  ++ GK
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGK 470

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H  T+K   +    V ++L T+Y KCG +E++  +F+G+  ++   W ++I+GF ++G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + + L   M +DG  P+E T    L  C+S  +   G   H   ++ G+  G  +G+
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+V+MYS  G + +  +Q+ +       VS ++ I+G+ ++   ++    F  MV +   
Sbjct: 591 ALVNMYSKCGSL-KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D F  SSILKA +L    +   Q+H+ I K    +   VGSSL+  Y+K GS +D  + 
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           FSQ+   D+++W ++I +Y+Q+G+A +A+ ++  M  +G +P   TF+ VLSACSH GLV
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++      SMVK+YGI PE  HY CMVD LGR+G+L  A  FI+N+ IKP A +W  L A
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           AC+ H ++++ +  +K+ +EL+P DA  Y++LSN+ AE G   + EE RKLMK   + KE
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889

Query: 659 PGCS 662
           PG S
Sbjct: 890 PGWS 893



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 243/486 (50%), Gaps = 14/486 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F+T SL++ Y+  G +     +   +P  D+ SCN +++GY ++ LF+++  FF K+ 
Sbjct: 83  DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            +  + N  +Y ++++ C +L A    + +   T+K+ Y     V +AL+ ++ K    E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  VF   +  NV  W  II G  ++ +Y     L   M      P+ YT++  LA+CA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           SL     G +  A+VIK G A   FV TAIVD+Y+  G + EA +    +  + S VSW 
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRI-PNPSVVSWT 320

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             ++G+ ++     A+E F +M  +    +  T +S++ AC     +    Q+H+ + KS
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQL---TAADVVSWNSMIKAYSQNGRARKAI 507
            F  +  V ++LI  Y+K G  + +E+VF  L      ++V  N MI ++SQ+ +  KAI
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
            LF +M+ EG+R    +  ++LS      L   G++V    +K  G++ +    S +  L
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKS-GLVLDLTVGSSLFTL 494

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAA 625
             + G LE +      +P K  A  W  + +    +  L+ A  +  ++L+    PD++ 
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553

Query: 626 VYVTLS 631
           +   L+
Sbjct: 554 LAAVLT 559



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 11/286 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VL+ CS    L  G+  H    +  +     + ++LVNMY+KCG +K    V 
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++P LD  SC+ L++GY+++ L    F  F  +       + +  S++L          
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q+HA   K+   ++ +V ++LLTMY K G ++D    F  +   ++I+WTA+I  + 
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM----FH--AQVIKRG 349
           QHG   + L++  LM+E G  P++ TF   L++C     SH G +    FH  + V   G
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-----SHGGLVEESYFHLNSMVKDYG 784

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +   +     +VD     G + EA+  +  M     ++ W   +A 
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 189/623 (30%), Positives = 315/623 (50%), Gaps = 40/623 (6%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +LV+MY KC +I+    +  +M   D+ +   ++ GYA+    +++   F K+    V P
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 257

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +     T++  C  L A+ + + +     + ++     +  A++ MY KCG +E A  +F
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + + ++NVISW+A+I  +  HG   K L L  +M   G+ P++ T    L +C + RN  
Sbjct: 318 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLT 377

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                HAQ    GM     V   +V  YS    + +A      M     SVSW+  + GF
Sbjct: 378 QVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVR-DSVSWSVMVGGF 436

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYS----------------------------SIL 428
            +          F +++R  A  D +T                              +++
Sbjct: 437 AKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVV 496

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC+ L ++     I   I + KF+ +V +G+++I+ + KCG  E A  +F ++   +V+
Sbjct: 497 FACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVI 556

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SW++MI AY  +G+ RKA+ LF  M+  GI P   T +++L ACSH+GLV++G + F  M
Sbjct: 557 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM 616

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            ++Y +  +  HY+C+VDLLGRAG+L+ AL  I ++ ++    +W     ACR H D+ +
Sbjct: 617 WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVL 676

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           AE  +  +LEL P +   Y+ LSN+YA AG   D  + R LM  + + K PG +WIEV N
Sbjct: 677 AEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDN 736

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVLY-HSER 717
           K ++F   + +H    ++YE LK L  ++E +G+           D E +  +LY HSE+
Sbjct: 737 KSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEK 796

Query: 718 LAVGFGLISLPAKNKFECSRTLE 740
           LA+ FGLI+ P        + L 
Sbjct: 797 LAIAFGLIATPEHTPIRIIKNLR 819



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 210/463 (45%), Gaps = 33/463 (7%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L+ +F I  L  C     L   R+ HA  +   +  +  V   L+  Y+    +     +
Sbjct: 79  LNPKFYISALVNCRN---LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 135

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   D  S + ++ G+AK   +   F  F +L     +P++YT   ++  C  L  +
Sbjct: 136 FDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL 195

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
                                  AL+ MY+KC  +EDA  +F+ + +R++++WT +I G+
Sbjct: 196 ---------------------QMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGY 234

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G   + L L   MRE+G+ P++      + +CA L   H   +    + ++   L  
Sbjct: 235 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 294

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +GTA++DMY+  G +  A++    M +  + +SW+A IA +  + +  +A++ F  M+ 
Sbjct: 295 ILGTAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLS 353

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D+ T +S+L AC    +L    Q+H++        N+ V + L+  Y+   + +D
Sbjct: 354 SGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDD 413

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +F  +   D VSW+ M+  +++ G        F +++  G RP N T    L  C  
Sbjct: 414 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYT----LPFC-- 467

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            G   +   +F+ M +E G++P++     +V    + G +  A
Sbjct: 468 -GNANESLVLFDKM-REEGVVPDKVAMVTVVFACAKLGAMHKA 508



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/489 (22%), Positives = 212/489 (43%), Gaps = 66/489 (13%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  ++ V+  C++   +   R     I +     D  +  ++++MYAKCG ++S   + 
Sbjct: 258 DKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIF 317

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S + ++A Y  +    +A   F  +    + P+  T +++L  C +   + 
Sbjct: 318 DRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLT 377

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           + +Q+HAQ      L    V+N L+  Y     ++DA  +F+G+  R+ +SW+ ++ GF 
Sbjct: 378 QVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFA 437

Query: 296 QHGDY----------------------------EKPLRLVCLMREDGIDPNEYTFTVALA 327
           + GDY                             + L L   MRE+G+ P++      + 
Sbjct: 438 KVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVF 497

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
           +CA L   H        + ++   L   +GTA++DM++  G +  A++    M +  + +
Sbjct: 498 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM-EEKNVI 556

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SW+A IA +  + +  +A++ F  M+R+    ++ T  S+L ACS           H+ +
Sbjct: 557 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS-----------HAGL 605

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V    E  +   S +         WED          ADV  +  ++    + GR  +A+
Sbjct: 606 V----EEGLRFFSLM---------WEDYS------VRADVKHYTCVVDLLGRAGRLDEAL 646

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVD 566
            L E M VE        + A L AC     V   +K   S+++   + P+   HY  + +
Sbjct: 647 KLIESMTVE---KDEGLWGAFLGACRTHKDVVLAEKAATSLLE---LQPQNPGHYILLSN 700

Query: 567 LLGRAGKLE 575
           +   AG+ E
Sbjct: 701 IYANAGRWE 709


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/709 (28%), Positives = 359/709 (50%), Gaps = 34/709 (4%)

Query: 11  INTSSFTFPYPV-----VEQVKPKKCNHRKTVEV----KEPFASYSACQLFNKSPKRAGL 61
           ++   +TFPY V     ++ VK  K  H +TV +    ++ F   S  +L+    +   L
Sbjct: 54  VSPDKYTFPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLY---AENGHL 109

Query: 62  STSDLIFNGYMNIEEK-----GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLD 116
           S +  +F+   NI +K      +  NGY    DS           N + +      S + 
Sbjct: 110 SDAQYLFD---NIPQKDSVLWNVMLNGYVKNGDS----------GNAIKIFLEMRHSEIK 156

Query: 117 KQFVIE--VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
              V    VLS C+ E  L+LG + H +     +  D  V  +L+ MY+KC  +++   +
Sbjct: 157 PNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKL 216

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
               P  D+ S N +++GY +N L  +A   F  +    ++P+  T+++ L     L ++
Sbjct: 217 FDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSL 276

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
              K++H   ++   +    + +AL+ +Y KC  +E A+ +       + +  T +I+G+
Sbjct: 277 KHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGY 336

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G  ++ L     + ++ + P   TF+    + A L   ++G   H  +IK  +    
Sbjct: 337 VLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKC 396

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            VG+AI+DMY+  G +  A +    + +   ++ WN+ I    +N +  EAI  F QM  
Sbjct: 397 HVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQMGM 455

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D  + S  L AC+ LP+L   ++IH  ++K    S+++  SSLI+ Y KCG+   
Sbjct: 456 EGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNF 515

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           + RVF ++   + VSWNS+I AY  +G  ++ + LF +M+  GI+P + TFL ++SAC H
Sbjct: 516 SRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGH 575

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +G V +G + +  M +EYGI     HY+C+ D+ GRAG+L+ A   I+++P  P A +W 
Sbjct: 576 AGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWG 635

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L  AC  H ++++AE  SK + +LDP ++  YV L+N+ A AG      + R +MK + 
Sbjct: 636 TLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERG 695

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
           + K PG SWIEV N  + F + + SH    ++Y  L  L+ +++  G+ 
Sbjct: 696 VRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYV 744



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 226/442 (51%), Gaps = 7/442 (1%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY + G +K    +   +     ++ N ++ G+     F+ A  F+LK+ G  V P+ YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGL 279
           +  ++  C  L ++  GK +H +T+ L  L +   V ++L+ +Y + G + DA+ +F+ +
Sbjct: 61  FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            Q++ + W  ++NG+ ++GD    +++   MR   I PN  TF   L+ CAS     +G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H   +  G+ L   V   ++ MYS   +  +A ++L +    +  VSWN  I+G+ +N
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKC-QCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               EA   F  M+      D  T++S L   + L SL  C++IH  I++     +V + 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           S+LI+ Y KC   E A+++  Q ++ D V   +MI  Y  NG+ ++A+  F  +V E ++
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIAL 578
           PT+ TF ++  A +    +  G+++  S++K    L E+ H  S ++D+  + G+L++A 
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK--LDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 579 IFISNLPIKPTAPIWRPLFAAC 600
              + +  K  A  W  +  +C
Sbjct: 417 RVFNRITEK-DAICWNSMITSC 437


>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 192/585 (32%), Positives = 297/585 (50%), Gaps = 45/585 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F T S +   AK G I S   +  +MP+ D  + N +LA Y++  L  QA   F  +   
Sbjct: 6   FQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIA 65

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC------ 266
           + +P+ +T++  L+ C  L  +  G ++HAQ +     S   V N+L+ MY KC      
Sbjct: 66  NSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSA 125

Query: 267 -------------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
                                    G+ + A  VF+G+ ++  I+W  +I+G+ Q GD E
Sbjct: 126 RRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVE 185

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG----MALGDFVG 357
             L L   MRED + P+++TF+  + +   L+    GYM H  +IK G    M + + +G
Sbjct: 186 LCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIG 245

Query: 358 -------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                   A++D +  +G+  EA     ++    + VSW + I G+ RN   E+A+  F 
Sbjct: 246 ILTQVSWNAMIDAHMKIGDTHEAFLVF-QLAPEKNVVSWTSMITGYARNGHGEQALSFFV 304

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +M+ N    D+FT+ ++L ACS L +L   + IH  I+   F + V VG+ L+  Y KCG
Sbjct: 305 KMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCG 364

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             + +   F ++   D+VSWN+M+     +G A +A+ L+E+MV  G++P   TF+ +L 
Sbjct: 365 DIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLM 424

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
            CSHSGL++ GQ +FESMV  YG+  E  H  CMVDLLGR G L  A   +        A
Sbjct: 425 TCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRA 484

Query: 591 PIWRP--LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
               P  L  AC  HS+++M   + + +   +P     YV LSN+Y  +G   +AE  RK
Sbjct: 485 ETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRK 544

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            M    + K PGCSWIEV NK+  F + N SH  M ++ + L  L
Sbjct: 545 TMTDHGVKKMPGCSWIEVRNKVTVFVAGNHSHPYMEELCKILNFL 589



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 157/360 (43%), Gaps = 45/360 (12%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+      LS C+    L  G + HA +  +       V  SL++MY KC    S   V 
Sbjct: 70  DRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVF 129

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQA-------------------------------FS 204
           ++M  ++  S   LL  Y  + LFD A                                 
Sbjct: 130 EEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLG 189

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK----------TA 254
            F K+    +QP+ +T+S ++     L     G  +H   +K  +             T 
Sbjct: 190 LFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQ 249

Query: 255 VS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           VS NA++  ++K G   +A  VF+   ++NV+SWT++I G+ ++G  E+ L     M E+
Sbjct: 250 VSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMEN 309

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            I P+++TF   L +C+SL     G M H  +I  G      VG  +V+MY+  G+I  +
Sbjct: 310 HIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGS 369

Query: 374 KKQLKE-MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
               KE +GK    VSWNA + G   +    +A+E + +MV +    D+ T+  +L  CS
Sbjct: 370 NTAFKEILGKDL--VSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCS 427


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 202/702 (28%), Positives = 339/702 (48%), Gaps = 85/702 (12%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + + C   +S L+ +    VL  C+  +    G++ H++I   +V  D+ +   LV+ 
Sbjct: 84  NAMELICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSF 143

Query: 162 YAKCGDIKSMVAVVKQMP----YL------------------------------------ 181
           YA CGD+K    V   M     YL                                    
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPES 203

Query: 182 -----------DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                      D+ S N +++GY  N L ++    + ++  + +  +  T  ++L  C +
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              +  GK +H+  +K  +  +   SN LL MY KCG ++ A  VFE + +RNV+SWT++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ + G  +  ++L+  M ++G+  +    T  L +CA   +   G   H  +    M
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               FV  A++DMY+  G +  A      M      +SWN  I                 
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTM-VVKDIISWNTMIG---------------- 426

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
                +   D  T + +L AC+ L +L   ++IH  I+++ + S+ HV ++L++ Y KCG
Sbjct: 427 -----ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
               A  +F  + + D+VSW  MI  Y  +G   +AI  F +M   GI P   +F+++L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSHSGL++ G + F  M  ++ I P+  HY+CMVDLL R G L  A  FI  LPI P A
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            IW  L   CR + D+++AE +++++ EL+P+++  YV L+N+YAEA    + +  R+ +
Sbjct: 602 TIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKI 661

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIGH------- 702
             + + K PGCSWIE+  K+  F S  N SH     +   LK++ +++++ GH       
Sbjct: 662 GKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYA 721

Query: 703 ----TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                + +KE  +  HSE+LA+ FGL++LP +     ++ L 
Sbjct: 722 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 67/424 (15%)

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           +   V  + A I  F Q GD E  + L+C+ ++  ++   Y+  + L  CA L++   G 
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETKTYSSVLQL--CAGLKSFTDGK 119

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM------------------- 380
             H+ +    + + + +G  +V  Y+  G++ E ++    M                   
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 381 ------------------GKSASS-------------VSWNAQIAGFFRNQKTEEAIEAF 409
                             GK   S             +SWN+ I+G+  N  TE  +  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM+      D  T  S+L  C+   +L+  + +HS  +KS FE  ++  ++L++ Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  + A RVF ++   +VVSW SMI  Y+++GR+  AI L ++M  EG++       ++L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI--- 586
            AC+ SG + +G+ V +  +K   +       + ++D+  + G +E A    S + +   
Sbjct: 360 HACARSGSLDNGKDVHD-YIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 587 ----------KPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYA 635
                     KP +     +  AC   S L+  + I   IL      D  V   L ++Y 
Sbjct: 419 ISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478

Query: 636 EAGL 639
           + G+
Sbjct: 479 KCGV 482


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 181/578 (31%), Positives = 328/578 (56%), Gaps = 8/578 (1%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G +  +L  K+ +  + F  ++L+++YAKCG ++    V   MP  +  S N L+AGY 
Sbjct: 111 IGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYT 170

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++     A   FL+++   + P+  T++++L      S      QLH + +K        
Sbjct: 171 ESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLM-HQLHGKIVKYGSALGLT 229

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRL-VCLMRE 312
           V NA +T Y +CG ++D+  +F+G+   R++ISW A++  +  +G  ++ ++  V +M+E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289

Query: 313 DGIDPNEYTFTVALASCASL-RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE-- 369
            G+ P+ Y+FT  ++SC+    + H G + H  VIK  +     V  A++ MY+   E  
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349

Query: 370 -IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + +A K    +     +VSWN+ + G+ ++  + +A++ F  M   +   DE+ +S+ L
Sbjct: 350 MMEDAYKCFNSL-VLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAAL 408

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           ++ S L  L   +QIH  ++ S F SN  V SSLI  Y+K G  +DA + F +   +  V
Sbjct: 409 RSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSV 468

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            WN+MI  Y+Q+G+A    ILF +M+       + TF+ ++++CSH+GLV +G ++  +M
Sbjct: 469 PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTM 528

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
             +YG+     HY+C VDL GRAG+L+ A   I ++P +P A +W  L  ACR H ++++
Sbjct: 529 ETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVEL 588

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           A  ++  +   +P   + YV LS+MY+  G+ +D    +++MK + +SK PG S IEV N
Sbjct: 589 ASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEVKN 648

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
           +++ F +++KSH +M ++YE L+ L+Q  + + + ++E
Sbjct: 649 EVHSFNAEDKSHPKMDEIYEMLRVLLQVEQMLSNCEDE 686



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 164/313 (52%), Gaps = 7/313 (2%)

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCG--MMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           HA  +K  + + T   N LLT Y +     +  A  VF+ + +R+ +SW A++      G
Sbjct: 14  HASLLKSGFAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASG 72

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            + +  RL+  M   G+  N +    AL S A  R   +G    +  +K G+A   F  +
Sbjct: 73  AHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAAS 132

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++D+Y+  G + +A++    M +  ++VSWNA IAG+  +     A+E F +M R    
Sbjct: 133 ALLDVYAKCGRVRDARQVFDGMPER-NTVSWNALIAGYTESGDMASALELFLEMEREGLV 191

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            DE T++S+L A    PS     Q+H +IVK      + V ++ I AY++CGS +D+ R+
Sbjct: 192 PDEATFASLLTAVE-GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRI 250

Query: 479 FSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSG 536
           F  +    D++SWN+M+ AY+ NG   +A+  F +M+ E G+ P   +F +++S+CS  G
Sbjct: 251 FDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHG 310

Query: 537 LVQDGQKVFESMV 549
                 +V   +V
Sbjct: 311 HDDHQGRVIHGLV 323



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG++ H L+  +    + FV++SL+ MY+K G I       ++         N ++ G
Sbjct: 417 LQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFG 476

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA++   +     F ++       +H T+  ++  C     +DEG ++   TM+ +Y   
Sbjct: 477 YAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI-LNTMETKYGVP 535

Query: 253 TAVSNAL--LTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
             + +    + +Y + G ++ A+ + + +  + + + W  ++   + HG+ E
Sbjct: 536 LRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVE 587


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 191/567 (33%), Positives = 301/567 (53%), Gaps = 4/567 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAV 174
           D   V+ VL  C+  E   + R  H    K  + G    V  +LV++Y KCG  K+   V
Sbjct: 239 DLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKV 298

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++   ++ S N ++  ++    +  A   F  +    ++PN  T S+ML + G L   
Sbjct: 299 FDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLF 358

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G ++H  ++K+   S   +SN+L+ MY K G    A ++F  +  RN++SW A+I  F
Sbjct: 359 KLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANF 418

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            ++    + + LV  M+  G  PN  TFT  L +CA L   ++G   HA++I+ G +L  
Sbjct: 419 ARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDL 478

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV  A+ DMYS  G +  A+       +    VS+N  I G+ R   + E++  FS+M  
Sbjct: 479 FVSNALTDMYSKCGCLNLAQNVFNISVR--DEVSYNILIIGYSRTNDSLESLRLFSEMRL 536

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D  ++  ++ AC+ L  +   ++IH  +V+  F +++ V +SL++ Y +CG  + 
Sbjct: 537 LGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDL 596

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A +VF  +   DV SWN+MI  Y   G    AI LFE M  +G+   + +F+AVLSACSH
Sbjct: 597 ATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSH 656

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
            GL++ G+K F+ M+ +  I P   HY+CMVDLLGRAG +E A   I  L I P   IW 
Sbjct: 657 GGLIEKGRKYFK-MMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWG 715

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L  ACR H ++++  + ++ + EL P     Y+ LSNMYAEA    +A + R+LMK + 
Sbjct: 716 ALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRG 775

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHS 681
             K PGCSW++V + ++ F    K  S
Sbjct: 776 AKKNPGCSWVQVGDLVHAFLVGEKIDS 802



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 267/545 (48%), Gaps = 18/545 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    +  GR  H +  K    GD FV  +L+  Y  CG     + V  +MP  D
Sbjct: 143 VLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERD 202

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGI--DVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             S N ++   + +  +++A  FF  +      +QP+  T  ++L +C         + +
Sbjct: 203 KVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIV 262

Query: 241 HAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           H   +K+  L     V NAL+ +Y KCG  + ++ VF+ + +RNVISW AII  F   G 
Sbjct: 263 HCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGK 322

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           Y   L +  LM ++G+ PN  T +  L     L    +G   H   +K  +    F+  +
Sbjct: 323 YMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNS 382

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY+  G    A     +MG   + VSWNA IA F RN+   EA+E   QM       
Sbjct: 383 LIDMYAKSGSSRIASTIFNKMGVR-NIVSWNAMIANFARNRLEYEAVELVRQMQAKGETP 441

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T++++L AC+ L  L   ++IH+RI++     ++ V ++L + Y+KCG    A+ VF
Sbjct: 442 NNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF 501

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + ++  D VS+N +I  YS+   + +++ LF +M + G+RP   +F+ V+SAC++   ++
Sbjct: 502 N-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIR 560

Query: 540 DGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            G+++   +V++        H    + ++DL  R G++++A      +  K  A  W  +
Sbjct: 561 QGKEIHGLLVRKL----FHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVAS-WNTM 615

Query: 597 FAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-E 654
                   +L  A  + + + E   + D+  +V + +  +  GL    E+ RK  KM  +
Sbjct: 616 ILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGL---IEKGRKYFKMMCD 672

Query: 655 ISKEP 659
           ++ EP
Sbjct: 673 LNIEP 677



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 180/367 (49%), Gaps = 5/367 (1%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N L+   +   +FD  F  +  +    V+P+  TY  +L +C     + +G+++H    K
Sbjct: 107 NTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFK 165

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           L +     V N LL  Y  CG+  DA  VF+ + +R+ +SW  +I     HG YE+ L  
Sbjct: 166 LGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGF 225

Query: 307 --VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDM 363
             V +  + GI P+  T    L  CA   +  M  + H   +K G+  G   VG A+VD+
Sbjct: 226 FRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDV 285

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G    +KK   E+ +  + +SWNA I  F    K  +A++ F  M+      +  T
Sbjct: 286 YGKCGSEKASKKVFDEIDER-NVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVT 344

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
            SS+L     L       ++H   +K   ES+V + +SLI+ Y K GS   A  +F+++ 
Sbjct: 345 ISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMG 404

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++VSWN+MI  +++N    +A+ L  +M  +G  P N TF  VL AC+  G +  G++
Sbjct: 405 VRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKE 464

Query: 544 VFESMVK 550
           +   +++
Sbjct: 465 IHARIIR 471



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 23/202 (11%)

Query: 383 SASSVSWNA-----QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           S S+  WN       IAG F      +    ++ MVR     DE TY  +LK CS    +
Sbjct: 100 SRSAFLWNTLIRANSIAGVF------DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEV 153

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
               ++H    K  F+ +V VG++L+  Y  CG + DA +VF ++   D VSWN++I   
Sbjct: 154 RKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLC 213

Query: 498 SQNGRARKAIILFEKMVVE--GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY--- 552
           S +G   +A+  F  MV    GI+P   T ++VL  C+     +   KV   +V  Y   
Sbjct: 214 SLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCA-----ETEDKVMARIVHCYALK 268

Query: 553 -GILPEEAHY-SCMVDLLGRAG 572
            G+L       + +VD+ G+ G
Sbjct: 269 VGLLGGHVKVGNALVDVYGKCG 290



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 6/182 (3%)

Query: 426 SILKACSLLPSLATCEQIHS-RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           ++L+ C+L  +L+  +Q+H+  ++      +V + +SLI  Y   G   ++  +F    A
Sbjct: 39  NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98

Query: 485 --ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
                  WN++I+A S  G        +  MV  G++P   T+  VL  CS    V+ G+
Sbjct: 99  YSRSAFLWNTLIRANSIAG-VFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGR 157

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           +V   +  + G   +    + ++   G  G    A+     +P +     W  +   C  
Sbjct: 158 EV-HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVS-WNTVIGLCSL 215

Query: 603 HS 604
           H 
Sbjct: 216 HG 217


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 290/504 (57%), Gaps = 13/504 (2%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G+Q+HA  +K        V + L+  Y K  +   +  VFE   +++  +W+++I+ F 
Sbjct: 72  KGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+ +    ++  C M  + + P+++ F  A  +CA L    +G   H  VIK G  +  F
Sbjct: 132 QNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVF 191

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VG+++VDMY+  G+I EA+    EM    + VSW+  I G+ +  + EEA+  F + +  
Sbjct: 192 VGSSLVDMYAKCGDIKEARNVFDEM-PHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLE 250

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++FT SS+++ C     L   +QIH    K+ ++ +  VGSSLI  Y+KCG  E A
Sbjct: 251 GLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGA 310

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            RVF ++   ++  WN+M+ A +Q+   ++A  LF KM   G+RP   TFL VL ACSH+
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHA 370

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV++G+K F +++K+Y I P   HY+ MVDLLGRAGKL+ AL  I  +P +PT  +W  
Sbjct: 371 GLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGA 429

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
               CR H +  +A F + ++ EL    + ++V LSN YA AG   DA + RK+++ + +
Sbjct: 430 FITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGV 489

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------- 705
            KE G SWIE  N++++F + ++ H  M ++Y+KL+ L +++E  G+  +          
Sbjct: 490 KKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGS 549

Query: 706 -EKEDRVLYHSERLAVGFGLISLP 728
            EK   + YHSERLA+ FGLIS+P
Sbjct: 550 EEKNQTIRYHSERLAIAFGLISIP 573



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 4/264 (1%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ++G+  H L+ KT    D FV +SLV+MYAKCGDIK    V  +MP+ ++ S + ++ GY
Sbjct: 172 DVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGY 231

Query: 194 AKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            +    ++A   F +  L+G+DV  N +T S+++ +CGS + ++ GKQ+H    K  Y  
Sbjct: 232 TQLGEHEEAMRLFKEALLEGLDV--NDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDL 289

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V ++L+++Y KCG++E A  VF+ +  +N+  W A++    QH   ++   L   M 
Sbjct: 290 SGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKME 349

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G+ PN  TF   L +C+       G  + A + K  +  G     ++VD+    G++ 
Sbjct: 350 NAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQ 409

Query: 372 EAKKQLKEMGKSASSVSWNAQIAG 395
           EA   +K M    +   W A I G
Sbjct: 410 EALSVIKGMPTEPTESVWGAFITG 433



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 204/440 (46%), Gaps = 6/440 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           + ++L   +R   L  G++ HA I K+ +     V   L+N Y+K         V ++  
Sbjct: 57  ICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESE 116

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                + + +++ +A+N     A  +F ++ G ++ P+ + + +    C  L   D GK 
Sbjct: 117 RKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKS 176

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K  Y     V ++L+ MY KCG +++A +VF+ +  RNV+SW+ +I G+ Q G+
Sbjct: 177 VHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGE 236

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +E+ +RL      +G+D N++T +  +  C S     +G   H    K    L  FVG++
Sbjct: 237 HEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSS 296

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ +YS  G I  A +   E+      + WNA +    ++  T+EA + F++M       
Sbjct: 297 LISLYSKCGLIEGAYRVFDEVPIKNLGM-WNAMLIACAQHAHTKEAFDLFTKMENAGMRP 355

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T+  +L ACS    +   ++  + + K + E      +S+++   + G  ++A  V 
Sbjct: 356 NFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVI 415

Query: 480 SQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS-ACSHSGL 537
             +      S W + I     +G    A    +K+   G    +S    +LS A + +G 
Sbjct: 416 KGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELG--AVSSGLHVMLSNAYAAAGR 473

Query: 538 VQDGQKVFESMVKEYGILPE 557
            +D  K    M+++ G+  E
Sbjct: 474 YEDAAKA-RKMLRDRGVKKE 492


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 207/672 (30%), Positives = 337/672 (50%), Gaps = 84/672 (12%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLK 208
           D+    ++V+ Y   GDI     V ++ P    D    N ++ G++ N     A + F K
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGK--QLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           +     +P+++T++++LA   +L A DE +  Q HA  +K      T+VSNAL+++Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGL-ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197

Query: 267 G----MMEDAESVFEGLVQRNVISWT--------------------------------AI 290
                ++  A  VF+ +++++  SWT                                A+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-- 348
           I+G+   G Y++ L +V  M   GI+ +E+T+   + +CA+     +G   HA V++R  
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317

Query: 349 ---------------------------GMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEM 380
                                       M   D V   A++  Y   G I EAK   KEM
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            K  + +SW   I+G   N   EE ++ FS M R      ++ +S  +K+C++L +    
Sbjct: 378 -KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +Q H++++K  F+S++  G++LI  Y KCG  E+A +VF  +   D VSWN++I A  Q+
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   +A+ ++E+M+ +GIRP   T L VL+ACSH+GLV  G+K F+SM   Y I P   H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
           Y+ ++DLL R+GK   A   I +LP KPTA IW  L + CR H ++++    + ++  L 
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616

Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           P+    Y+ LSNM+A  G   +    RKLM+ + + KE  CSWIE+  +++ F   + SH
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676

Query: 681 SEMPKVYEKLKQLMQQIEDIGH------------TDNEKEDRVLYHSERLAVGFGLISLP 728
            E   VY  L+ L +++  +G+            +D  KED +  HSE++AV FGL+ LP
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736

Query: 729 AKNKFECSRTLE 740
                   + L 
Sbjct: 737 PGTTIRIFKNLR 748



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 180/375 (48%), Gaps = 47/375 (12%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           QP  +  + ++ +    S ++  +QL  +  +   +++T     +++ Y   G +  A  
Sbjct: 46  QPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT----MVSGYCASGDITLARG 101

Query: 275 VFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           VFE   +  R+ + + A+I GF  + D    + L C M+ +G  P+ +TF   LA  A +
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALV 161

Query: 333 RNSHMG-YMFHAQVIKRGMALGDFVGTAIVDMYSG--------------LGEIWEAKKQ- 376
            +       FHA  +K G      V  A+V +YS                 EI E  ++ 
Sbjct: 162 ADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERS 221

Query: 377 --------------------LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
                               L+ M  +   V++NA I+G+      +EA+E   +MV + 
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG 281

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              DEFTY S+++AC+    L   +Q+H+ +++ + + + H  +SL+  Y KCG +++A 
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEAR 340

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F ++ A D+VSWN+++  Y  +G   +A ++F++M  + I     +++ ++S  + +G
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENG 396

Query: 537 LVQDGQKVFESMVKE 551
             ++G K+F  M +E
Sbjct: 397 FGEEGLKLFSCMKRE 411



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 157/366 (42%), Gaps = 41/366 (11%)

Query: 69  NGYMNIEEK---GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESL---LDKQFVIE 122
           NGY ++ E+   G+  N      ++   G+++ G           + S    LD+     
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    L+LG++ HA + +       F   SLV++Y KCG      A+ ++MP  D
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKD 350

Query: 183 IASCNCLLAGY-------------------------------AKNALFDQAFSFFLKLDG 211
           + S N LL+GY                               A+N   ++    F  +  
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
              +P  Y +S  +  C  L A   G+Q HAQ +K+ + S  +  NAL+TMY KCG++E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC-- 329
           A  VF  +   + +SW A+I    QHG   + + +   M + GI P+  T    L +C  
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A L +    Y    + + R     D     ++D+    G+  +A+  ++ +    ++  W
Sbjct: 531 AGLVDQGRKYFDSMETVYRIPPGADHYAR-LIDLLCRSGKFSDAESVIESLPFKPTAEIW 589

Query: 390 NAQIAG 395
            A ++G
Sbjct: 590 EALLSG 595



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G++YHA + K           +L+ MYAKCG ++    V + MP LD  S N L+A   +
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +    +A   + ++    ++P+  T  T+L  C     +D+G++ +  +M+  Y      
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK-YFDSMETVYRIPPGA 554

Query: 256 SN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDYE 301
            +   L+ +  + G   DAESV E L  +     W A+++G + HG+ E
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 38/155 (24%)

Query: 424 YSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           Y++ L+ C  L   SL     +H  I+   F+   H+ + LI+ Y K      A ++F +
Sbjct: 15  YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74

Query: 482 LTAA---------------------------------DVVSWNSMIKAYSQNGRARKAII 508
           ++                                   D V +N+MI  +S N     AI 
Sbjct: 75  ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           LF KM  EG +P N TF +VL+  +   LV D +K
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLA---LVADDEK 166


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 182/531 (34%), Positives = 295/531 (55%), Gaps = 13/531 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+++L  C    AI+ GKQLHA+  ++       ++  L+ +Y  C  + +A  +F+ + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RN+  W  +I G+  +G YE  + L   MR+ G+ P+++TF   L +C++L     G  
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  VI+ G+    FVG A++DMY+  G + E+ +Q+ +       V WN+ +A + +N 
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCV-ESARQVFDKIDERDVVCWNSMLATYSQNG 182

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + +E++     M  N     E T+   + A +    L   +++H    +  FESN  V +
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y K GS   A  +F  L    VVSWN+MI  Y+ +G A +A+ LF++M  + + P
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLP 301

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TF+ VL+ACSH GL+ +G+  F SM+ ++ I P   HY+CM+DLLG  G+LE A   
Sbjct: 302 DHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKL 361

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  + ++P A +W  L  +C+ H +++M E   ++++EL+PDD   YV LSNMYA+AG  
Sbjct: 362 IMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKW 421

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
                 R LM  K + K   CSWIEV NK++ F S++ SH +   +Y +LK+  + +++ 
Sbjct: 422 DGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEA 481

Query: 701 GHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           G+            D+EK D V  HSERLA+ FGLIS  A  K    + L 
Sbjct: 482 GYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLR 532


>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
           mitochondrial-like [Vitis vinifera]
          Length = 665

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 187/576 (32%), Positives = 318/576 (55%), Gaps = 11/576 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R +  +I K  +  + F+ A     + + G+++    V  +MP  D+ S N +++GY   
Sbjct: 93  RVFEDIIDKNLISWNIFLKA-----FVRFGELERARDVFDEMPKRDVVSWNTMISGYVSF 147

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAV 255
            LFD AF FF ++    ++P+ +TYST+L+    +S+   GKQ+HA  ++    LS   V
Sbjct: 148 GLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVV 204

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N+L+ MY K G+++ A  VF  + + ++ SW ++I    + G     LR   LMR  G 
Sbjct: 205 GNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGY 264

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+++T +  +  C++L++   G    A  I+ G      V +A +D++S    + ++ +
Sbjct: 265 SPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVR 324

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             +E+ +   SV  NA I+ +  +   E A++ F   +R +    EFT S +L A S+L 
Sbjct: 325 VFEEIYQ-WDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILL 383

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            +    QIHS +VKS  ES+V V SSL+E Y K G  + A + F+++ A D++SWN+MI 
Sbjct: 384 PVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIM 443

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             + NGR  KA+ +F+++++ G  P   T   VL AC+  GLV +G  +F SM KEYG++
Sbjct: 444 GLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVI 503

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P   HY+C+VD++ R GKL+ A+  +  +P +P+  IW  L  AC  + DL+  E ++++
Sbjct: 504 PAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAER 563

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ++EL+P  +  Y+ L+  Y   G        R+ MK K + K  GCSWI + N ++ F  
Sbjct: 564 VMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSWIGIKNHVFVFKE 623

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRV 711
               H     +Y  L+ L+Q+IED G+  +++ D+V
Sbjct: 624 NQLLHIGGKDIYFILRLLIQEIEDDGYA-SQQYDKV 658



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 186/390 (47%), Gaps = 37/390 (9%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           YS ++  C  L ++D  K +HAQ +K+ + + T + N  L +Y + G   D+  VFE ++
Sbjct: 40  YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII 99

Query: 281 QRN-------------------------------VISWTAIINGFKQHGDYEKPLRLVCL 309
            +N                               V+SW  +I+G+   G ++   R    
Sbjct: 100 DKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSE 159

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLG 368
           M++ GI P+ +T++  L+  +S   +  G   HA +I+ G+ L +  VG +++ MY   G
Sbjct: 160 MQKAGIRPSGFTYSTLLSFVSS---ACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFG 216

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            +  A      M +     SWN+ I    ++     A+  F  M     + D+FT S+++
Sbjct: 217 VVDYAFGVFITM-EELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVI 275

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             CS L  L   EQI +  ++  F SN  V S+ I+ ++KC   ED+ RVF ++   D V
Sbjct: 276 TVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSV 335

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
             N+MI +Y+ +G    A+ LF   + E +RPT  T   VLSA S    V  G ++  S+
Sbjct: 336 LCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQI-HSL 394

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           V + G+  +    S +V++  + G ++ A+
Sbjct: 395 VVKSGLESDVIVASSLVEMYAKFGLIDSAM 424



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 39/365 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V  V++ CS  + LE G +  AL  +     +  V+++ +++++KC  ++  V V 
Sbjct: 267 DQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVF 326

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           +++   D   CN +++ YA +   + A   F+     +++P  +T S +L+    L  +D
Sbjct: 327 EEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVD 386

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G Q+H+  +K    S   V+++L+ MY K G+++ A   F  +  R++ISW  +I G  
Sbjct: 387 QGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLA 446

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALG 353
            +G   K L +   +   G  P+E T    L +C    L +  +  +F +   + G+   
Sbjct: 447 YNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLS-IFSSMEKEYGVIPA 505

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
                 IVDM S  G++ EA   ++ M    S + W                        
Sbjct: 506 IEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWG----------------------- 542

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                       S+L AC +   L   E++  R+++ + +S++     L +AY   G WE
Sbjct: 543 ------------SLLCACEIYGDLRFTERVAERVMELEPQSSLPY-LVLAQAYEMRGRWE 589

Query: 474 DAERV 478
              RV
Sbjct: 590 SLVRV 594



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 113/242 (46%), Gaps = 39/242 (16%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           YS++++ C LL SL   + +H++++K  F ++  +G+  ++ Y++ G+  D+ RVF  + 
Sbjct: 40  YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII 99

Query: 484 AADVVSWNSMIKAYSQNG---RAR----------------------------KAIILFEK 512
             +++SWN  +KA+ + G   RAR                             A   F +
Sbjct: 100 DKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSE 159

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M   GIRP+  T+  +LS  S +     G+++  SM++    L      + ++ + G+ G
Sbjct: 160 MQKAGIRPSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFG 216

Query: 573 KLEIAL-IFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVT 629
            ++ A  +FI+   +  T+  W  L  +C    + +L + +F+  + +   PD   V   
Sbjct: 217 VVDYAFGVFITMEELDITS--WNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTV 274

Query: 630 LS 631
           ++
Sbjct: 275 IT 276


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 181/583 (31%), Positives = 321/583 (55%), Gaps = 44/583 (7%)

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS------- 251
           F +A S ++++     +P+++ +  +L     L  +  G+Q+HA  +K  Y S       
Sbjct: 73  FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVAN 132

Query: 252 --------------KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                         KT  +NAL+ MY K G ++D++++FE  V R+++SW  +I+ F Q 
Sbjct: 133 TLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS 192

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFV 356
             + + L    LM  +G++ +  T    L +C+ L    +G   HA V++   +    FV
Sbjct: 193 DRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFV 252

Query: 357 GTAIVDMYSGLGEIWEAKKQLKE-MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           G+A+VDMY    ++   ++     +G+      WNA I+G+ RN   E+A+  F +M++ 
Sbjct: 253 GSALVDMYCNCRQVESGRRVFDHILGRRIEL--WNAMISGYARNGLDEKALILFIEMIKV 310

Query: 416 DAAC-DEFTYSSILKAC-SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                +  T +S++ AC   L ++A  ++IH+  +++   S++ VGS+L++ Y KCG   
Sbjct: 311 AGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLN 370

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR-----PTNSTFLAV 528
            + RVF+++   +V++WN +I A   +G+  +A+ LF+ MV E  R     P   TF+ V
Sbjct: 371 LSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITV 430

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK- 587
            +ACSHSGL+ +G  +F  M  ++G+ P   HY+C+VDLLGRAG+LE A   ++ +P + 
Sbjct: 431 FAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEF 490

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
                W  L  ACR H ++++ E  +K +L L+P+ A+ YV LSN+Y+ AGL   A E R
Sbjct: 491 DKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVR 550

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---- 703
           K M+   + KEPGCSWIE  +++++F + + SH +  +++  L+ L +++   G+     
Sbjct: 551 KNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTS 610

Query: 704 -------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
                  ++EKE+ +  HSE+LA+ FG+++ P       ++ L
Sbjct: 611 CVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 653



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 187/364 (51%), Gaps = 23/364 (6%)

Query: 150 GDQ-FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF-- 206
           GD+ F   +L+ MYAK G +    A+ +     D+ S N +++ ++++  F +A +FF  
Sbjct: 145 GDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRL 204

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIK 265
           + L+G+++  +  T +++L  C  L  +D GK++HA  ++   L + + V +AL+ MY  
Sbjct: 205 MVLEGVEL--DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCN 262

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTV 324
           C  +E    VF+ ++ R +  W A+I+G+ ++G  EK L L + +++  G+ PN  T   
Sbjct: 263 CRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMAS 322

Query: 325 ALASCA-SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
            + +C  SL     G   HA  I+  +A    VG+A+VDMY+  G +  +++   EM  +
Sbjct: 323 VMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEM-PN 381

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-----NDAACDEFTYSSILKACSLLPSLA 438
            + ++WN  I     + K EEA+E F  MV       +A  +E T+ ++  ACS    ++
Sbjct: 382 KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLIS 441

Query: 439 TCEQIHSRIVKSKFESNVHVGSS----LIEAYNKCGSWEDAERVFSQLTAA--DVVSWNS 492
               +  R+   K +  V   S     +++   + G  E+A  + + + A    V +W+S
Sbjct: 442 EGLNLFYRM---KHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSS 498

Query: 493 MIKA 496
           ++ A
Sbjct: 499 LLGA 502



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 20/304 (6%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVA 173
           LD   +  VL  CS  E L++G+  HA + +   +  + FV ++LV+MY  C  ++S   
Sbjct: 212 LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 271

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAIC-GSL 231
           V   +    I   N +++GYA+N L ++A   F+++  +  + PN  T ++++  C  SL
Sbjct: 272 VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSL 331

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           +AI +GK++HA  ++    S   V +AL+ MY KCG +  +  VF  +  +NVI+W  +I
Sbjct: 332 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 391

Query: 292 NGFKQHGDYEKPLRLVCLM-----REDGIDPNEYTFTVALASCASLRNSHMGY------M 340
                HG  E+ L L   M     R     PNE TF    A+C     SH G       +
Sbjct: 392 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC-----SHSGLISEGLNL 446

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV-SWNAQIAGFFRN 399
           F+      G+         +VD+    G++ EA + +  M      V +W++ +     +
Sbjct: 447 FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506

Query: 400 QKTE 403
           Q  E
Sbjct: 507 QNVE 510



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 21/216 (9%)

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           +K   K    S S+ SW   +    R+    EAI  + +M  + A  D F + ++LKA S
Sbjct: 44  SKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVS 103

Query: 433 LLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSW------------------- 472
            L  L T EQIH+  VK  +  S+V V ++L+  Y KCG                     
Sbjct: 104 GLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGR 163

Query: 473 -EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            +D++ +F      D+VSWN+MI ++SQ+ R  +A+  F  MV+EG+     T  +VL A
Sbjct: 164 VDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPA 223

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           CSH   +  G+++   +++   ++      S +VD+
Sbjct: 224 CSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDM 259



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 13/213 (6%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  HA   +  +  D  V ++LV+MYAKCG +     V  +MP  ++ + N L+     
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 396

Query: 196 NALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           +   ++A   F  +      G + +PN  T+ T+ A C     I EG  L  +      +
Sbjct: 397 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 456

Query: 251 SKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQR--NVISWTAIINGFKQHGDYEKPLRLV 307
             T+   A ++ +  + G +E+A  +   +      V +W++++   + H + E  L  V
Sbjct: 457 EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVE--LGEV 514

Query: 308 CLMREDGIDPN---EYTFTVALASCASLRNSHM 337
                  ++PN    Y     + S A L N  M
Sbjct: 515 AAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAM 547


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 204/658 (31%), Positives = 327/658 (49%), Gaps = 88/658 (13%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-D 213
           SLV   A  G ++   A    +P    D    N +++ +A+ +L   A S F  L G   
Sbjct: 97  SLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGS 156

Query: 214 VQPNHYTYSTMLAICGSLS--AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC----- 266
           ++P+ Y+++ +++  G +   A     QLH   +K    +  +VSNAL+ +Y+KC     
Sbjct: 157 LRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEA 216

Query: 267 -----------------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
                                        G +  A SVFE +  +  + W A+I+G+ Q 
Sbjct: 217 SWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 276

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG------MA 351
           G       L   M  + +  +E+TFT  L++CA+      G   H Q+I+         A
Sbjct: 277 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 336

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMG------------------------------ 381
           L   V  A+V +YS  G+I  AK+    M                               
Sbjct: 337 LP--VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVM 394

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
              + +SW   ++G+     +E+A++ F+QM   D    ++TY+  + AC  L +L    
Sbjct: 395 PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGR 454

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           Q+H+ +V+  FE++   G++L+  Y KCG+  DA  VF  +   D VSWN+MI A  Q+G
Sbjct: 455 QLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHG 514

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
             R+A+ LF++MV EGI P   +FL +L+AC+H+GLV +G   FESM +++GI P E HY
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           + ++DLLGR+G++  A   I  +P +PT  IW  + + CR + D++   + + Q+  + P
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIP 634

Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
                Y+ LSN Y+ AG   DA   RKLM+ + + KEPGCSWIEV +KI+ F   +  H 
Sbjct: 635 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHP 694

Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           E  +VY+ L+ +  ++  +G+  +           EKE  +  HSE+LAVGFGL+ LP
Sbjct: 695 EAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLP 752



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 191/426 (44%), Gaps = 69/426 (16%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D     ++V  Y + GD+ +  +V +++        N +++GY ++ +   AF  F ++ 
Sbjct: 231 DDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMV 290

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ--YLSKTA--VSNALLTMYIKC 266
              V  + +T++++L+ C +      GK +H Q ++LQ  ++ + A  V+NAL+T+Y K 
Sbjct: 291 SEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKG 350

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK------------------------ 302
           G +  A+ +F+ +  ++V+SW  I++G+   G  +K                        
Sbjct: 351 GKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYV 410

Query: 303 -------PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
                   L+L   MR + + P +YT+  A+A+C  L     G   HA +++ G    + 
Sbjct: 411 HGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNS 470

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            G A++ MY+  G + +A+     M  +  SVSWNA I+   ++    EA+E F QMV  
Sbjct: 471 AGNALLTMYAKCGAVNDARLVFLVM-PNLDSVSWNAMISALGQHGHGREALELFDQMVAE 529

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  ++ +IL AC+           H+ +V   F                   +E  
Sbjct: 530 GIDPDRISFLTILTACN-----------HAGLVDEGFH-----------------YFESM 561

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +R F      D   +  +I    ++GR  +A  L + M  E   PT S + A+LS C  +
Sbjct: 562 KRDFGISPGED--HYARLIDLLGRSGRIGEARDLIKTMPFE---PTPSIWEAILSGCRTN 616

Query: 536 GLVQDG 541
           G ++ G
Sbjct: 617 GDMEFG 622



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           ++ C     L+ GR+ HA + +           +L+ MYAKCG +     V   MP LD 
Sbjct: 441 IAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDS 500

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S N +++   ++    +A   F ++    + P+  ++ T+L  C     +DEG   + +
Sbjct: 501 VSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH-YFE 559

Query: 244 TMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDY 300
           +MK  +       +   L+ +  + G + +A  + + +      S W AI++G + +GD 
Sbjct: 560 SMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDM 619

Query: 301 E 301
           E
Sbjct: 620 E 620


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 190/624 (30%), Positives = 321/624 (51%), Gaps = 15/624 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ VL  C+RE  + LG+  H    K  +  +  +  +L++MY+KCG I +   + 
Sbjct: 41  DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 100

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSA 233
           K     ++ S N ++ G++        F    ++   G DV+ +  T    + +C   S 
Sbjct: 101 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 160

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +   K+LH  ++K +++    V+NA +  Y KCG +  A+ VF G+  + V SW A+I G
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             Q  D    L     M+  G+ P+ +T    L++C+ L++  +G   H  +I+  +   
Sbjct: 221 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 280

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV  +++ +Y   GE+   +     M +  S VSWN  I G+ +N   + A+  F QMV
Sbjct: 281 LFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 339

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                    +   +  ACSLLPSL    + H+  +K   E +  +  SLI+ Y K GS  
Sbjct: 340 LYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSIT 399

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            + +VF+ L      SWN+MI  Y  +G A++AI LFE+M   G  P + TFL VL+AC+
Sbjct: 400 QSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN 459

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPI 592
           HSGL+ +G +  + M   +G+ P   HY+C++D+LGRAG+L+ AL +    +  +    I
Sbjct: 460 HSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGI 519

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W+ L ++CR H +L+M E ++ ++ EL+P+    YV LSN+YA  G   D  + R+ M  
Sbjct: 520 WKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNE 579

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH---------- 702
             + K+ GCSWIE+  K++ F    +      ++      L  +I  +G+          
Sbjct: 580 MSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 639

Query: 703 -TDNEKEDRVLYHSERLAVGFGLI 725
            ++ EK +++  HSE+LA+ +GLI
Sbjct: 640 LSEEEKIEQLRGHSEKLALTYGLI 663



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 213/460 (46%), Gaps = 15/460 (3%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL-----DGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +  S N ++  ++ N   +++F    ++     DG    P+  T  T+L +C     I  
Sbjct: 2   NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA-FMPDVATLVTVLPVCAREREIGL 60

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H   +KL+   +  ++NAL+ MY KCG + +A+ +F+    +NV+SW  ++ GF  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGD 354
            GD      ++  M   G D      T+  A       S +  +   H   +K+     +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V  A V  Y+  G +  A++    + +S +  SWNA I G  ++     +++A  QM  
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGI-RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D FT  S+L ACS L SL   +++H  I+++  E ++ V  S++  Y  CG    
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
            + +F  +    +VSWN++I  Y QNG   +A+ +F +MV+ GI+    + + V  ACS 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
              ++ G++     +K   +L ++A  +C ++D+  + G +  +    + L  K TA  W
Sbjct: 360 LPSLRLGREAHAYALKH--LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-W 416

Query: 594 RPLFAACRCHSDLKMA--EFISKQILELDPDDAAVYVTLS 631
             +      H   K A   F   Q    +PDD      L+
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 456



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 171/376 (45%), Gaps = 39/376 (10%)

Query: 111 LESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           +  LL   F +  +LS CS+ + L LG+  H  I +  +  D FV  S++++Y  CG++ 
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           ++ A+   M    + S N ++ GY +N   D+A   F ++    +Q    +   +   C 
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L ++  G++ HA  +K        ++ +L+ MY K G +  +  VF GL +++  SW A
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 418

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+  HG  ++ ++L   M+  G +P++ TF   L +C            H+ +I  G
Sbjct: 419 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACN-----------HSGLIHEG 467

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +   D        M S  G     K  LK          +   I    R  + ++A+   
Sbjct: 468 LRYLD-------QMKSSFG----LKPNLKH---------YACVIDMLGRAGQLDKALRVV 507

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES--NVHVGSSLIEAYN 467
           ++ +  +A  D   + S+L +C +  +L   E++ +++ + + E   N  + S+L   Y 
Sbjct: 508 AEEMSEEA--DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNL---YA 562

Query: 468 KCGSWEDAERVFSQLT 483
             G WED  +V  ++ 
Sbjct: 563 GLGKWEDVRKVRQRMN 578


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 206/656 (31%), Positives = 344/656 (52%), Gaps = 68/656 (10%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD-IKSMVAVVKQMPYLDIASCNCLLAG 192
           +LG + H LI+KT    D  V   L++MY  C D      +V   +   +  S N +++ 
Sbjct: 219 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV 278

Query: 193 YAKNALFDQAFSFFLKLD----GIDVQPNHYTYSTMLAICGSLSAIDEGK----QLHAQT 244
           Y++      A+  F  +     G   +PN   +S         S ++EG+    ++HA  
Sbjct: 279 YSRRGDAVSAYDLFSSMQKEGLGFSFKPND-AFS-------EFSVLEEGRRKGREVHAHV 330

Query: 245 MKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
           ++     +K A+ N L+ MY K G + DA SVFE +V+++ +SW ++I+G  Q+   E  
Sbjct: 331 IRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDA 390

Query: 304 LRLVCLMRE--------------------------------DGIDPNEYTFTVALASCAS 331
             +  LM E                                 G   +  TF   L++ +S
Sbjct: 391 AEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSS 450

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    + +  HA V+K  ++    +G A++  Y   GE+ E +K    M ++   VSWN+
Sbjct: 451 LSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNS 510

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I+G+  N+   +A++    M++     D FT+++IL AC+ + +L    ++H+  +++ 
Sbjct: 511 MISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRAC 570

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            ES+V VGS+L++ Y+KCG  + A R F  +   +V SWNSMI  Y+++G   KA+ LF 
Sbjct: 571 LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT 630

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M+++G  P + TF+ VLSACSH G V++G + F+SM + Y + P   H+SCMVDLLGRA
Sbjct: 631 RMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRA 690

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF---ISKQILELDPDDAAVYV 628
           GKL+    FI+++P+KP   IWR +  AC C ++ +  E     ++ +LEL+P +A  YV
Sbjct: 691 GKLDEVGDFINSMPMKPNVLIWRTVLGAC-CRANGRNTELGRRAAEMLLELEPQNAVNYV 749

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            L+NMYA      D  + R  MK   + KE GCSW+ + + ++ F + +K H E   +Y+
Sbjct: 750 LLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYD 809

Query: 689 KLKQLMQQIEDIGHTDNEK-----------EDRVLYHSERLAVGFGLI---SLPAK 730
           KL++L +++ D G+    K           E+ + YHSE++AV F L    +LP +
Sbjct: 810 KLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSALPIR 865



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 272/594 (45%), Gaps = 60/594 (10%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           C+ T+  +  + ESL+++         C  EE  EL    H    K    G+ F++ +L+
Sbjct: 91  CNTTLFSSSETFESLINR-----YQGSCCSEEAREL----HLQSIKYGFVGNLFLSNTLI 141

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           N+Y + GD+ S   +  +M   ++ +  CL++GY +N   D+A + F  +      PNHY
Sbjct: 142 NIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHY 201

Query: 220 TYSTMLAIC--GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC-GMMEDAESVF 276
            + + L  C     S    G Q+H    K +Y S   V N L++MY  C     DA SVF
Sbjct: 202 AFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVF 261

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI----DPNEYTFTVALASCASL 332
           +G+  RN ISW +II+ + + GD      L   M+++G+     PN+     A +  + L
Sbjct: 262 DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPND-----AFSEFSVL 316

Query: 333 RNSHM-GYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                 G   HA VI+ G+      +G  +V+MY+  G I +A     E+     SVSWN
Sbjct: 317 EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF-ELMVEKDSVSWN 375

Query: 391 AQIAGFFRNQKTEEAIEAFS--------------------------------QMVRNDAA 418
           + I+G  +N+ +E+A E FS                                QM+R    
Sbjct: 376 SLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWG 435

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
               T+ +IL A S L       QIH+ ++K     +  +G++L+  Y KCG   + E++
Sbjct: 436 LSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKI 495

Query: 479 FSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           F++++   D VSWNSMI  Y  N    KA+ L   M+ +G R  + TF  +LSAC+    
Sbjct: 496 FARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVAT 555

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           ++ G +V    ++   +  +    S +VD+  + G+++ A  F   +P++     W  + 
Sbjct: 556 LERGMEVHACGIRAC-LESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYS-WNSMI 613

Query: 598 AACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           +    H   + A +  ++ +L+  P D   +V + +  +  G   +  E  K M
Sbjct: 614 SGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSM 667



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      +LS C+    LE G   HA   +  +  D  V ++LV+MY+KCG I      
Sbjct: 538 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 597

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + MP  ++ S N +++GYA++   ++A   F ++      P+H T+  +L+ C  +  +
Sbjct: 598 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 657

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
           +EG + H ++M   Y     V +   ++ +  + G +++       + ++ NV+ W  ++
Sbjct: 658 EEGFE-HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 716


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 188/568 (33%), Positives = 312/568 (54%), Gaps = 27/568 (4%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N ++A  A++    +A   F  +  + + P   ++   +  C SL  I  GKQ H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q     Y S   VS+AL+ MY  CG +EDA  VF+ + +RN++SWT++I G+  +G+  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN-- 157

Query: 302 KPLRLVCLMREDGIDPNE---------YTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
             L  V L ++  +D N+               +++C+ +    +    H+ VIKRG   
Sbjct: 158 -ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216

Query: 353 GDFVGTAIVDMYS--GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           G  VG  ++D Y+  G G +  A+K   ++      VS+N+ ++ + ++  + EA E F 
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 411 QMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           ++V+N     +  T S++L A S   +L   + IH ++++   E +V VG+S+I+ Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A + F ++   +V SW +MI  Y  +G A KA+ LF  M+  G+RP   TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH+GL  +G + F +M   +G+ P   HY CMVDLLGRAG L+ A   I  + +KP 
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           + IW  L AACR H ++++AE    ++ ELD  +   Y+ LS++YA+AG   D E  R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           MK + + K PG S +E+  +++ F   ++ H +  K+YE L +L +++ + G+  N    
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 706 -------EKEDRVLYHSERLAVGFGLIS 726
                  EKE  +  HSE+LA+ FG+++
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMN 603



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 191/445 (42%), Gaps = 65/445 (14%)

Query: 46  YSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS-FPDGFID 97
           YS C       ++F++ PKR  +S + +I         +G   NG +    S F D  +D
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMI---------RGYDLNGNALDAVSLFKDLLVD 171

Query: 98  DGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           +   +            LD   ++ V+S CSR     L    H+ + K        V  +
Sbjct: 172 ENDDDDAM--------FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223

Query: 158 LVNMYAKCGDIKSMVA--VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDV 214
           L++ YAK G+    VA  +  Q+   D  S N +++ YA++ + ++AF  F +L     V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
             N  T ST+L       A+  GK +H Q +++       V  +++ MY KCG +E A  
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
            F+ +  +NV SWTA+I G+  HG   K L L   M + G+ PN  TF   LA+C     
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC----- 398

Query: 335 SHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           SH G   H +  +   A+ G F     ++ Y  + ++         +G+           
Sbjct: 399 SHAG--LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL---------LGR----------- 436

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AGF +        +A+  + R     D   +SS+L AC +  ++   E   +R+ +    
Sbjct: 437 AGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD-S 487

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERV 478
           SN      L   Y   G W+D ERV
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERV 512



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 10/291 (3%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LK 208
           D FV+++L+ MY+ CG ++    V  ++P  +I S   ++ GY  N     A S F  L 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 209 LDGIDVQPNHYTYS----TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
           +D  D     +  S    ++++ C  + A    + +H+  +K  +    +V N LL  Y 
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 265 KCGM--MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
           K G   +  A  +F+ +V ++ +S+ +I++ + Q G   +   +   L++   +  N  T
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            +  L + +      +G   H QVI+ G+     VGT+I+DMY   G +  A+K    M 
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM- 348

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           K+ +  SW A IAG+  +    +A+E F  M+ +    +  T+ S+L ACS
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 172/514 (33%), Positives = 289/514 (56%), Gaps = 12/514 (2%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+HAQ          AV+N LL MY++ G +EDA+ +F+G+ +R+  SW+ I+ G+ + 
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G++     +   +   G   ++Y+  V + +C  L++   G + H   +K G+  G FV 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             +VDMY+    + +A +   +M K     +W   I     +    E++  F +M     
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKR-DLATWTVMIGALAESGVPVESLVFFDRMRNQGI 248

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+    +++ AC+ L ++   + IH+ I  + +  +V +G+++I+ Y KCGS E A  
Sbjct: 249 VPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARW 308

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +F ++   +V++W++MI AY  +G+  KA+ LF  M+  GI P   TF+++L ACSH+GL
Sbjct: 309 IFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGL 368

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           +++GQ+ F SM  EYG+ P+  HY+CMVDLLGRAG+L+ AL  I  +P++    +W  L 
Sbjct: 369 IEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR H  L +AE +++ +L+L       YV LSN+YA AG   D  + R LM    + K
Sbjct: 429 GACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRK 488

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEK 707
            PG +WIEV  K+Y+F   +K+H    ++Y+ LK+L +++E  G+           D E 
Sbjct: 489 IPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEV 548

Query: 708 EDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           +  +LY HSE+LA+ FGL+ LP  +    ++ L 
Sbjct: 549 KQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLR 582



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 191/444 (43%), Gaps = 46/444 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA I       +  V   L+ MY + G ++    +   M      S + ++ GYAK 
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKV 129

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             F   F  F +L       + Y+   ++  C  L  +  G+ +H  T+K        V 
Sbjct: 130 GNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVC 189

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
             L+ MY +C ++EDA  +F  + +R++ +WT +I    + G   + L     MR  GI 
Sbjct: 190 ATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIV 249

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P++      + +CA L   +     HA +   G +L   +GTA++DMY+  G + E+ + 
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSV-ESARW 308

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           + +  +  + ++W+A IA +  + + E+A+E F  M+R+    +  T+ S+L ACS    
Sbjct: 309 IFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACS---- 364

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-----TAADVVSWN 491
                  H+ ++                        E+ +R FS +        DV  + 
Sbjct: 365 -------HAGLI------------------------EEGQRFFSSMWDEYGVTPDVKHYT 393

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            M+    + GR  +A+ + E M VE        + A+L AC     +   ++V  S++K 
Sbjct: 394 CMVDLLGRAGRLDEALEMIEGMPVE---KDEVLWGALLGACRIHRHLDLAERVARSLLKL 450

Query: 552 YGILPEEAHYSCMVDLLGRAGKLE 575
               P   HY  + ++   AGK E
Sbjct: 451 QSQKP--GHYVLLSNIYANAGKWE 472



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 35/361 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C   + L+ GR  H +  K  +    FV A+LV+MYA+C  ++    +  +M   D
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRD 216

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +A+   ++   A++ +  ++  FF ++    + P+     T++  C  L A+++ K +HA
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                 Y     +  A++ MY KCG +E A  +F+ +  RNVI+W+A+I  +  HG  EK
Sbjct: 277 YINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK 336

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M   GI PN  TF   L +C+           HA +I+ G             
Sbjct: 337 ALELFPMMLRSGILPNRITFVSLLYACS-----------HAGLIEEGQRF---------- 375

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                  +W+      E G +     +   +    R  + +EA+E    M       DE 
Sbjct: 376 ----FSSMWD------EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEK---DEV 422

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            + ++L AC +   L   E++   ++K + +   H    L   Y   G WED  +    +
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHY-VLLSNIYANAGKWEDMAKTRDLM 481

Query: 483 T 483
           T
Sbjct: 482 T 482


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 200/634 (31%), Positives = 344/634 (54%), Gaps = 25/634 (3%)

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA----VCGDQFVTASLVNMYA 163
           C + +SL       ++L  C  E  +   +   A + K+     + G + V ASL     
Sbjct: 38  CITCDSLTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELSGSKLVDASL----- 92

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KCG+I     +   MP   I + N ++A Y K+    +A   +  +   +V P+ YT S+
Sbjct: 93  KCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSS 152

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           +      LS   E ++ H   + L   +S   V +AL+ MY+K G   +A+ V + + ++
Sbjct: 153 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 212

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           +V+  TA+I G+ Q G+  + ++    M  + + PNEYT+   L SC +L++   G + H
Sbjct: 213 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 272

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
             ++K G        T+++ MY     + ++    K + K  + V+W + I+G  +N + 
Sbjct: 273 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCI-KYPNQVTWTSLISGLVQNGRE 331

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           E A+  F +M+R+    + FT SS L+ CS L       Q+H  + K  F+ + + GS L
Sbjct: 332 ETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGL 391

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           IE Y KCG  + A  VF  L+  DV+S N+MI +Y+QNG  R+A+ LFE+M+  G++P +
Sbjct: 392 IELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPND 451

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            T L+VL AC++SGLV++G ++F+S  K+  +L  + HY+CMVD+LGRAG+LE A + I+
Sbjct: 452 VTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTND-HYACMVDMLGRAGRLEEAEMLIT 510

Query: 583 NLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
            +   P   +WR L +AC+ H  ++MAE I+++ILE+ P D    + LSN+YA  G    
Sbjct: 511 EVT-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKR 569

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK-SHSEMPKVYEKLKQLMQQIEDIG 701
             E +  MK  ++ K P  SW+E+  + + F + +  SH    ++ E L++L+++ +D+G
Sbjct: 570 VIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLG 629

Query: 702 HTDNE-----------KEDRVLYHSERLAVGFGL 724
           + +++           KE  +  HSE+LA+ F +
Sbjct: 630 YVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAV 663


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 196/614 (31%), Positives = 321/614 (52%), Gaps = 34/614 (5%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K  +    FV  +L++ Y K G + +   V  +M   D  + N ++ G +K  L 
Sbjct: 372 HPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLH 431

Query: 200 DQAFSFF--LKLDGIDVQPNHY-TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            QA   F  ++  G    P H   YS                  H+++     L+   V+
Sbjct: 432 TQALQLFAAMRRAGYSRHPLHLLQYS------------------HSRSRSTSVLN-VFVN 472

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N+LL  Y KC  ++D   +F+ + +R+ +S+  II  +  +      LRL   M++ G D
Sbjct: 473 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 532

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
                +   L+   SL + H+G   HAQ++  G+A  D +G A++DMYS  G +  AK  
Sbjct: 533 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 592

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
                +  S++SW A I G+ +N + EEA++ FS M R     D  T+SSI+KA S L  
Sbjct: 593 FSNRSEK-SAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAM 651

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           +    Q+HS +++S ++S+V  GS L++ Y KCG  ++A R F ++   + +SWN++I A
Sbjct: 652 IGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISA 711

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+  G A+ AI +FE M+  G  P + TFL+VL+ACSH+GL  +  K F  M  +Y I P
Sbjct: 712 YAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISP 771

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
            + HY+C++D LGR G        +  +P K    IW  +  +CR H + ++A   + ++
Sbjct: 772 WKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKL 831

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
             ++P DA  YV LSN+YA AG   DA   +K+M+ + + KE G SW+E+  KIY F S 
Sbjct: 832 FGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASN 891

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KEDRVLYHSERLAVGFGLI 725
           + +   + ++ ++L +L ++++  G+           D+E K + + YHSERLA+ F L+
Sbjct: 892 DLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALM 951

Query: 726 SLPAKNKFECSRTL 739
           + PA       + L
Sbjct: 952 NTPAGTPIRIMKNL 965



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/532 (23%), Positives = 239/532 (44%), Gaps = 30/532 (5%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y+  GD+ +   +    P+ +  +   ++  +A       A S F  + G  V P+
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPD 353

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             T +T+L + G          LH   +K    +   V N LL  Y K G++  A  VF 
Sbjct: 354 RVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFL 408

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  ++ +++ A++ G  + G + + L+L   MR  G                S    H+
Sbjct: 409 EMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY---------------SRHPLHL 453

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
               H++  +    L  FV  +++D YS    + + ++   EM +   +VS+N  IA + 
Sbjct: 454 LQYSHSRS-RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPER-DNVSYNVIIAAYA 511

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
            NQ     +  F +M +         Y+++L     LP +   +QIH+++V     S   
Sbjct: 512 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 571

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           +G++LI+ Y+KCG  + A+  FS  +    +SW ++I  Y QNG+  +A+ LF  M   G
Sbjct: 572 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 631

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +RP  +TF +++ A S   ++  G+++   +++  G        S +VD+  + G L+ A
Sbjct: 632 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCLDEA 690

Query: 578 LIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA 635
           L     +P + +   W  + +A   + + K A  + + +L    +P D+  ++++    +
Sbjct: 691 LRTFDEMPERNSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP-DSVTFLSVLAACS 748

Query: 636 EAGLQADAEEQRKLMKMK-EIS--KEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             GL  +  +   LMK +  IS  KE     I+   ++  F    K   EMP
Sbjct: 749 HNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMP 800



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 143/297 (48%), Gaps = 6/297 (2%)

Query: 100 CSNTVPVTCYSLESL-LDKQFV--IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA 156
           C+ TV      ++ L  D+Q +    +LS       + +G++ HA +    +  +  +  
Sbjct: 515 CAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGN 574

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +L++MY+KCG + +  +           S   L+ GY +N   ++A   F  +    ++P
Sbjct: 575 ALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRP 634

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +  T+S+++    SL+ I  G+QLH+  ++  Y S     + L+ MY KCG +++A   F
Sbjct: 635 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 694

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA--SLRN 334
           + + +RN ISW A+I+ +  +G+ +  +++   M   G +P+  TF   LA+C+   L +
Sbjct: 695 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 754

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
             M Y FH    +  ++        ++D    +G   + +K L EM   A  + W +
Sbjct: 755 ECMKY-FHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTS 810



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 149/356 (41%), Gaps = 24/356 (6%)

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           G  S +  G    A+ M  Q   K   S N +L+ Y   G +  A+ +F     RN  +W
Sbjct: 263 GLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTW 322

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T ++      G     L L   M  +G+ P+  T T  L        S      H   IK
Sbjct: 323 TIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-----LHPFAIK 377

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+    FV   ++D Y   G +  A++   EM     +V++NA + G  +     +A++
Sbjct: 378 FGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEM-HDKDAVTYNAMMMGCSKEGLHTQALQ 436

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F+ M R         YS           L   +  HSR  +S    NV V +SL++ Y+
Sbjct: 437 LFAAMRRAG-------YSR--------HPLHLLQYSHSR-SRSTSVLNVFVNNSLLDFYS 480

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KC   +D  R+F ++   D VS+N +I AY+ N  A   + LF +M   G       +  
Sbjct: 481 KCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYAT 540

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           +LS       V  G+++   +V   G+  E+   + ++D+  + G L+ A    SN
Sbjct: 541 MLSVAGSLPDVHIGKQIHAQLVL-LGLASEDLLGNALIDMYSKCGMLDAAKSNFSN 595



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 10/204 (4%)

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G D   Y   + L S  S  + H       Q+  + +    F    I+  YS  G++  A
Sbjct: 252 GFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNI----FSLNLILSAYSSSGDL-PA 306

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
            + L       ++ +W   +       +T +A+  F  M+      D  T +++L     
Sbjct: 307 AQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLN---- 362

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           LP   T   +H   +K   +++V V ++L++AY K G    A RVF ++   D V++N+M
Sbjct: 363 LPG-CTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAM 421

Query: 494 IKAYSQNGRARKAIILFEKMVVEG 517
           +   S+ G   +A+ LF  M   G
Sbjct: 422 MMGCSKEGLHTQALQLFAAMRRAG 445



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     ++   S    + LGR+ H+ + ++      F  + LV+MYAKCG +   +   
Sbjct: 635 DRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTF 694

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  +  S N +++ YA       A   F  +      P+  T+ ++LA C      D
Sbjct: 695 DEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLAD 754

Query: 236 EGKQLHAQTMKLQY-LSKTAVSNA-LLTMYIKCGMMEDAESVF-EGLVQRNVISWTAIIN 292
           E  + +   MK QY +S      A ++    + G     + +  E   + + I WT+I++
Sbjct: 755 ECMK-YFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 813

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
             + HG+ E  L  V   +  G++P + T  V L++
Sbjct: 814 SCRIHGNQE--LARVAADKLFGMEPTDATPYVILSN 847


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/549 (34%), Positives = 310/549 (56%), Gaps = 15/549 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  V+S C R   +    + HA + K+    D  V A+L++M +K GDI     V + + 
Sbjct: 176 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLD 235

Query: 180 YLDIAS---CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
             DI      N ++  +++N    +A   F ++    + P+ ++  ++L++   L  ++ 
Sbjct: 236 --DIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNL 290

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GKQ+H+ T+K   +    V ++L TMY KCG +E++ S+F+ +  ++   W ++I+GF +
Sbjct: 291 GKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNE 350

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           +G   + + L   M ++G  P+E T    L  C+SL +       H   ++ G+  G  +
Sbjct: 351 YGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPL 410

Query: 357 GTAIVDMYSGLGEIWEAKK---QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           G+A+V+ YS  G +  A+K   +L EM      VS ++ I+G+ ++   ++    F  MV
Sbjct: 411 GSALVNTYSKCGSLKLARKVYDRLPEM----DPVSCSSLISGYSQHGLVQDGFLLFRDMV 466

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +  + D +  SSILKA  L        Q+H+ I K    +   VGSSL+  Y+K GS E
Sbjct: 467 MSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIE 526

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           D  + FSQ+   D+++W ++I +Y+Q+G+A +A+ ++  M  +G +P   TF+ VLSACS
Sbjct: 527 DCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACS 586

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H GLV++G     SMVK+YGI PE  HY CMVD LGR+G+L  A  FI+  PIKP A +W
Sbjct: 587 HGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVW 646

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L AAC+ + D+++ +  +K+ +EL+P DA  YV+LSN+ AE G   + EE RKLMK  
Sbjct: 647 GTLLAACKIYGDVELGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGT 706

Query: 654 EISKEPGCS 662
            + KEPG S
Sbjct: 707 GVQKEPGWS 715



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 139/486 (28%), Positives = 246/486 (50%), Gaps = 16/486 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           VL+ C+  E L  G+   A + K   CG  D FV  S+V++YAKCG +     V  ++  
Sbjct: 79  VLAACASLEELRFGKVVQARVIK---CGAEDVFVCTSIVDLYAKCGHMAEAREVFSRISN 135

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + S   +L+GY K+     A   F ++    V+ N  T +++++ CG  S + E  Q+
Sbjct: 136 PSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQV 195

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL---VQRNVISWTAIINGFKQH 297
           HA   K  +   T+V+ AL++M  K G +  +E VFE L    ++N+++   ++  F Q+
Sbjct: 196 HAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQN 253

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
               K +RL   M ++G++P+E++    L+    L   ++G   H+  +K G+ L   VG
Sbjct: 254 KKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCL---NLGKQVHSYTLKSGLILDLTVG 310

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +++  MYS  G + E+    +E+     +  W + I+GF       EAI  FS+M+    
Sbjct: 311 SSLFTMYSKCGSLEESYSLFQEI-PFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGT 369

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
           + DE T +++L  CS LPSL   ++IH   +++  +  + +GS+L+  Y+KCGS + A +
Sbjct: 370 SPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARK 429

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           V+ +L   D VS +S+I  YSQ+G  +   +LF  MV+ G    +    ++L A   S  
Sbjct: 430 VYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEE 489

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
            + G +V  + + + G+  E +  S ++ +  + G +E      S +   P    W  L 
Sbjct: 490 SELGAQV-HAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQIN-GPDLIAWTALI 547

Query: 598 AACRCH 603
           A+   H
Sbjct: 548 ASYAQH 553



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 216/434 (49%), Gaps = 5/434 (1%)

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
           + V +SL++ ++K    +    V +     ++   N ++AG  +N  +   F  F ++  
Sbjct: 7   EVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCN 66

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
              +P+ YTYS++LA C SL  +  GK + A+ +K        V  +++ +Y KCG M +
Sbjct: 67  GFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAE 125

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF  +   +V+SWT +++G+ +  D    L +   MR  G++ N  T T  +++C  
Sbjct: 126 AREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGR 185

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
                     HA V K G  L   V  A++ M S  G+I  +++  +++         N 
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNV 245

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +  F +N+K  +AI  F++M++     DEF+  S+L   S+L  L   +Q+HS  +KS 
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL---SVLDCLNLGKQVHSYTLKSG 302

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
              ++ VGSSL   Y+KCGS E++  +F ++   D   W SMI  +++ G  R+AI LF 
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M+ EG  P  ST  AVL+ CS    +   +++    ++  GI       S +V+   + 
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRA-GIDRGMPLGSALVNTYSKC 421

Query: 572 GKLEIALIFISNLP 585
           G L++A      LP
Sbjct: 422 GSLKLARKVYDRLP 435



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 187/390 (47%), Gaps = 14/390 (3%)

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           + Y     V ++L+  + K    EDA  VF   +  NV  W  II G  ++ +Y     L
Sbjct: 1   MGYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDL 60

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M      P+ YT++  LA+CASL     G +  A+VIK G A   FV T+IVD+Y+ 
Sbjct: 61  FHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAK 119

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G + EA++    +  + S VSW   ++G+ ++     A+E F +M  +    +  T +S
Sbjct: 120 CGHMAEAREVFSRI-SNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTS 178

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT--- 483
           ++ AC     +    Q+H+ + KS F  +  V ++LI   +K G    +ERVF  L    
Sbjct: 179 VISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIR 238

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             ++V  N M+ ++SQN +  KAI LF +M+ EG+ P   +  ++LS      L   G++
Sbjct: 239 RQNIV--NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNL---GKQ 293

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           V    +K  G++ +    S +  +  + G LE +      +P K  A  W  + +    +
Sbjct: 294 VHSYTLKS-GLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNA-CWASMISGFNEY 351

Query: 604 SDLKMAEFISKQILE--LDPDDAAVYVTLS 631
             L+ A  +  ++L+    PD++ +   L+
Sbjct: 352 GYLREAIGLFSEMLDEGTSPDESTLAAVLT 381



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 3/281 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VL+ CS    L   +  H    +  +     + ++LVN Y+KCG +K    V 
Sbjct: 372 DESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVY 431

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            ++P +D  SC+ L++GY+++ L    F  F  +       + Y  S++L         +
Sbjct: 432 DRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESE 491

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G Q+HA   K+   ++ +V ++LLTMY K G +ED    F  +   ++I+WTA+I  + 
Sbjct: 492 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYA 551

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH--AQVIKRGMALG 353
           QHG   + L++ CLM+E G  P++ TF   L++C+       GY FH  + V   G+   
Sbjct: 552 QHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGY-FHLNSMVKDYGIEPE 610

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +     +VD     G + EA+  +        ++ W   +A
Sbjct: 611 NRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLA 651



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 33/267 (12%)

Query: 45  SYSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID 97
           +YS C       +++++ P+   +S S LI +GY    + G+ ++G+    D    GF  
Sbjct: 417 TYSKCGSLKLARKVYDRLPEMDPVSCSSLI-SGY---SQHGLVQDGFLLFRDMVMSGFSM 472

Query: 98  DGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           D          Y++ S+L       VLS     E  ELG + HA ITK  +C +  V +S
Sbjct: 473 DS---------YAISSILKAA----VLS-----EESELGAQVHAYITKIGLCTEPSVGSS 514

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+ MY+K G I+       Q+   D+ +   L+A YA++   ++A   +  +     +P+
Sbjct: 515 LLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPD 574

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESV 275
             T+  +L+ C     ++EG   H  +M   Y  +    +   ++    + G + +AE+ 
Sbjct: 575 KVTFVGVLSACSHGGLVEEG-YFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENF 633

Query: 276 FEGL-VQRNVISWTAIINGFKQHGDYE 301
                ++ + + W  ++   K +GD E
Sbjct: 634 INTRPIKPDALVWGTLLAACKIYGDVE 660


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 178/555 (32%), Positives = 308/555 (55%), Gaps = 44/555 (7%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           QP+   YST++A C     ++ GK++HA T    ++    +SN L+ MY KCG + DA+ 
Sbjct: 60  QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119

Query: 275 VFEGLVQ-------------------------------RNVISWTAIINGFKQHGDYEKP 303
           +F+ + Q                               R+  SW A+I+G+   G Y + 
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEA 179

Query: 304 LRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
           L L  +M+E+   + N +T + ALA+ A++ +   G   H  +I+ G+ L + V TA++D
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLD 239

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G + EA+    +M      VSW   I   F + + +E    F  ++ +    +E+
Sbjct: 240 LYGKCGSLNEARGIFDQMA-DKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEY 298

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++ +L AC+ L +    +++H  + +  ++      S+L+  Y+KCG+ E A RVF+Q+
Sbjct: 299 TFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQM 358

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+VSW S+I  Y+QNG+   A+  FE ++  G +P   TF+ VLSAC+H+GLV  G 
Sbjct: 359 PRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGL 418

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F S+ +++G++    HY+C++DLL R+G+ + A   I N+P+KP   +W  L   CR 
Sbjct: 419 EYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRI 478

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++++AE  +K + EL+P++ A Y+TLSN+YA AGL  +  + R  M  + I K+PG S
Sbjct: 479 HGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKS 538

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WIE+  +++ F   + SH ++  ++E L +L +++++ G+            + +KE  +
Sbjct: 539 WIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNI 598

Query: 712 LYHSERLAVGFGLIS 726
            YHSE+LAV FG+IS
Sbjct: 599 FYHSEKLAVAFGIIS 613



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 205/471 (43%), Gaps = 58/471 (12%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C R   LELG+R HA    +       ++  L++MYAKCG +     +  ++P  D
Sbjct: 69  LIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKD 128

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS------AID- 235
           + S N +++GYA     +QA   F      D  P+   +S    I G +S      A+D 
Sbjct: 129 LCSWNTMISGYANVGRIEQARKLF------DEMPHRDNFSWNAVISGYVSQGWYMEALDL 182

Query: 236 -------------------------------EGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
                                           GK++H   ++        V  ALL +Y 
Sbjct: 183 FRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYG 242

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KCG + +A  +F+ +  ++++SWT +I+   + G  ++   L   +   G+ PNEYTF  
Sbjct: 243 KCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAG 302

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +CA L    MG   H  + + G     F  +A+V +YS  G    A++   +M +  
Sbjct: 303 VLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPR-P 361

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT-CEQI 443
             VSW + I G+ +N + + A++ F  ++R+    DE T+  +L AC+    +    E  
Sbjct: 362 DLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYF 421

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGR 502
           HS   K          + +I+   + G +++AE +   +    D   W S++     +G 
Sbjct: 422 HSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481

Query: 503 ----ARKAIILFEKMVVEGIRPTN-STFLAVLSACSHSGLVQDGQKVFESM 548
                R A  LFE      + P N +T++ + +  +++GL  +  KV   M
Sbjct: 482 IELAERAAKALFE------LEPENPATYITLSNIYANAGLWTEETKVRNDM 526



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 167/386 (43%), Gaps = 45/386 (11%)

Query: 296 QHGDYEKPLRLVCLMR--EDGID-------PNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           +H  +E+ + L C     ++ +D       P+   ++  +A+C   R   +G   HA   
Sbjct: 31  EHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTK 90

Query: 347 KRGMALGDFVGTAIVDMYS-------------------------------GLGEIWEAKK 375
                 G  +   ++ MY+                                +G I +A+K
Sbjct: 91  ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLL 434
              EM     + SWNA I+G+       EA++ F  M  N+++ C+ FT SS L A + +
Sbjct: 151 LFDEM-PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAI 209

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            SL   ++IH  +++S  E +  V ++L++ Y KCGS  +A  +F Q+   D+VSW +MI
Sbjct: 210 SSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
               ++GR ++   LF  ++  G+RP   TF  VL+AC+     Q G++V   M +  G 
Sbjct: 270 HRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGY 328

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFIS 613
            P     S +V +  + G  E A    + +P +P    W  L      +    MA +F  
Sbjct: 329 DPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGYAQNGQPDMALQFFE 387

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGL 639
             +      D   +V + +    AGL
Sbjct: 388 SLLRSGTKPDEITFVGVLSACTHAGL 413


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 192/602 (31%), Positives = 326/602 (54%), Gaps = 19/602 (3%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD--IASCNCLLAGYAK 195
           R HAL+    V   Q +  SL   YA+ G + +  + +   P     I + N LLA  ++
Sbjct: 33  RLHALLV---VSSSQNLFPSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSR 89

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
                 A   F  L     +P+  T++  L  C  L  +D  + +  +     Y     V
Sbjct: 90  AGSPGAALRVFRALPS-SARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFV 148

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            +ALL +Y +CG M DA  VF+G+ +++ ++W+ ++ GF   G   + L +   MRE G+
Sbjct: 149 CSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGV 208

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
             +E      + +C    N+ MG   H + ++ GM +   + T++VDMY+  G  ++  +
Sbjct: 209 AEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGH-FDVAR 267

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
           Q+  M    ++VSWNA I+GF +N   +EA++ F +M  +    D     S L AC+ + 
Sbjct: 268 QVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVG 327

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   + IH  I++ + E    +G+++++ Y+KCGS E A ++F++L++ D+V WN+MI 
Sbjct: 328 FLKLGKSIHGFILR-RLEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIA 386

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
               +G    A+ LF+++   GI+P ++TF ++LSA SHSGLV++G+  F+ M+ E+GI 
Sbjct: 387 CCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIE 446

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           P E H  C+VDLL R+G +E A   ++++  +PT PIW  L + C  +  L++ E I+K+
Sbjct: 447 PTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKK 506

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
           ILE  P+D  V   +SN+YA A       E RKLMK     K PG S IEV+   + F  
Sbjct: 507 ILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVM 566

Query: 676 QNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGL 724
           +++SH +  ++ + + +L  ++  +G+            ++ KE  + YHSERLA+ FGL
Sbjct: 567 EDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGL 626

Query: 725 IS 726
           ++
Sbjct: 627 LN 628



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 135/295 (45%), Gaps = 14/295 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++ V+  C+      +G   H    +  +  D  +  SLV+MYAK G       V 
Sbjct: 211 DEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVF 270

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + MPY +  S N L++G+A+N   D+A   F ++    +QP+     + L  C  +  + 
Sbjct: 271 RMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLK 330

Query: 236 EGKQLHAQTM-KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            GK +H   + +L++  +  +  A+L MY KCG +E A  +F  L  R+++ W A+I   
Sbjct: 331 LGKSIHGFILRRLEF--QCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACC 388

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKR 348
             HG     L L   + E GI P+  TF   L++      SH G      + F   + + 
Sbjct: 389 GTHGCGHDALALFQELNETGIKPDHATFASLLSAL-----SHSGLVEEGKFWFDRMITEF 443

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           G+   +     +VD+ +  G + EA + L  M    +   W A ++G   N+K E
Sbjct: 444 GIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLE 498


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 187/582 (32%), Positives = 305/582 (52%), Gaps = 3/582 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C     ++LGR+ HA + K+          +L++MY   G I+    V  ++P  D
Sbjct: 266 VIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKD 325

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + S   ++ GY +     +A   F  L   G   QPN + + ++ + C SL  ++ GKQ+
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQG-TYQPNEFIFGSVFSACSSLLELEYGKQV 384

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K           +L  MY K G +  A+  F  +   +++SW AII  F  +GD 
Sbjct: 385 HGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDA 444

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + +     M   G+ P+  T+   L +C S    + G   H+ ++K G      V  ++
Sbjct: 445 NEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSL 504

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+    + +A    +++ ++A+ VSWNA ++   + ++  E    + +M  +    D
Sbjct: 505 LTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPD 564

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T +++L  C+ L SL    Q+H   +KS    +V V + LI+ Y KCGS + A  VF 
Sbjct: 565 SITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFD 624

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                D+VSW+S+I  Y+Q G   +A+ LF  M   G++P   T+L  LSACSH GLV++
Sbjct: 625 STQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEE 684

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G ++++SM  E+GI P   H+SC+VDLL RAG L  A  FI    +      W+ L AAC
Sbjct: 685 GWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAAC 744

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           + H+++ +AE  +  IL+LDP ++A  V L N++A AG   +  + RKLMK   + K PG
Sbjct: 745 KTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPG 804

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            SWIEV +K + FFS++ SH +   +Y  L++L  Q+ D G+
Sbjct: 805 QSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGY 846



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 224/453 (49%), Gaps = 4/453 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    L+  ++ H  + K+       +   ++NMY KCG +K    V   M   ++ S 
Sbjct: 169 CANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSW 228

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++GY++N   + A   ++++      P+  T+ +++  C     ID G+QLHA  +K
Sbjct: 229 TSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIK 288

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             +       NAL++MY   G +E A +VF  +  +++ISW  +I G+ Q G   + L L
Sbjct: 289 SWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYL 348

Query: 307 VC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
              L+R+    PNE+ F    ++C+SL     G   H   +K G+    F G ++ DMY+
Sbjct: 349 FRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYA 408

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G +  AK    ++ K+   VSWNA IA F  N    EAI+ F QM+      D  TY 
Sbjct: 409 KFGFLPSAKMAFCQI-KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYI 467

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA- 484
           S+L  C     L    QIHS IVK  F+  + V +SL+  Y KC    DA  VF  ++  
Sbjct: 468 SLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRN 527

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A++VSWN+++ A  Q  +  +   L+++M   G +P + T   +L  C+    +  G +V
Sbjct: 528 ANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQV 587

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
               +K  G++ + +  + ++D+  + G L+ A
Sbjct: 588 HCYSIKS-GLILDVSVCNGLIDMYAKCGSLKHA 619



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 194/401 (48%), Gaps = 5/401 (1%)

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
           +AF F LK      +P+  TY++++  C +  ++D  K++H   +K  Y     + N ++
Sbjct: 144 EAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            MY KCG M+DA  VF+ +   NV+SWT++I+G+ Q+G     + +   M   G  P++ 
Sbjct: 202 NMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           TF   + +C    +  +G   HA VIK           A++ MY+  G+I  A      +
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLAT 439
             +   +SW   I G+ +     EA+  F  ++R      +EF + S+  ACS L  L  
Sbjct: 322 -PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEY 380

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            +Q+H   VK     NV  G SL + Y K G    A+  F Q+   D+VSWN++I A++ 
Sbjct: 381 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFAD 440

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           NG A +AI  F +M+  G+ P + T++++L  C     +  G+++   +VK  G   E  
Sbjct: 441 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVK-IGFDKEIT 499

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
             + ++ +  +   L  AL    ++        W  + +AC
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 540



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 152/312 (48%), Gaps = 5/312 (1%)

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T+T  + +CA+ R+       H  V+K        +   +++MY   G + +A+K    M
Sbjct: 161 TYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM 220

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +  + VSW + I+G+ +N +  +AI  + QM R+    D+ T+ S++KAC +   +   
Sbjct: 221 -QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLG 279

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            Q+H+ ++KS F  ++   ++LI  Y   G  E A  VF+++   D++SW +MI  Y Q 
Sbjct: 280 RQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL 339

Query: 501 GRARKAIILFEKMVVEGI-RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           G   +A+ LF  ++ +G  +P    F +V SACS    ++ G++V   M  ++G+     
Sbjct: 340 GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQV-HGMCVKFGLRRNVF 398

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
               + D+  + G L  A +    +   P    W  + AA   + D   A    +Q++ +
Sbjct: 399 AGCSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 457

Query: 620 D-PDDAAVYVTL 630
               D+  Y++L
Sbjct: 458 GLTPDSITYISL 469



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 154/325 (47%), Gaps = 6/325 (1%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I +L  C     L  GR+ H+ I K     +  V  SL+ MY KC  +   + V + +  
Sbjct: 467 ISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISR 526

Query: 181 -LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N +L+   +     + F  + ++     +P+  T +T+L  C  L+++  G Q
Sbjct: 527 NANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQ 586

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  ++K   +   +V N L+ MY KCG ++ A  VF+     +++SW+++I G+ Q G 
Sbjct: 587 VHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGL 646

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGT 358
             + L L  +M   G+ PNE T+  AL++C+ +     G+ ++ +   + G+       +
Sbjct: 647 GHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFS 706

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            IVD+ +  G + EA+  +++ G  A   +W   +A      KT   ++   +   N   
Sbjct: 707 CIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAAC----KTHNNVDIAERGAGNILK 762

Query: 419 CDEFTYSSILKACSLLPSLATCEQI 443
            D    ++++  C++  S    E++
Sbjct: 763 LDPSNSAAMVMLCNIHASAGNWEEV 787



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 111/199 (55%), Gaps = 2/199 (1%)

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           N+ I    +    +EA+EAF   ++N ++  +  TY+S++ AC+   SL   ++IH  ++
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 186

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS ++ ++ + + +I  Y KCGS +DA +VF  +   +VVSW SMI  YSQNG+A  AII
Sbjct: 187 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 246

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           ++ +M   G  P   TF +V+ AC  +G +  G+++   ++K +         + ++ + 
Sbjct: 247 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSW-FGHHLTSQNALISMY 305

Query: 569 GRAGKLEIALIFISNLPIK 587
              G++E A    + +P K
Sbjct: 306 TNFGQIEHASNVFTRIPTK 324



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 4/189 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  +L  C+    L +G + H    K+ +  D  V   L++MYAKCG +K    V 
Sbjct: 564 DSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVF 623

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                LDI S + L+ GYA+  L  +A + F  +  + VQPN  TY   L+ C  +  ++
Sbjct: 624 DSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVE 683

Query: 236 EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFE--GLVQRNVISWTAIIN 292
           EG +L+        +  T    + ++ +  + G + +AE+  +  GL   ++ +W  ++ 
Sbjct: 684 EGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGL-DADITAWKTLLA 742

Query: 293 GFKQHGDYE 301
             K H + +
Sbjct: 743 ACKTHNNVD 751


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 207/712 (29%), Positives = 359/712 (50%), Gaps = 40/712 (5%)

Query: 11  INTSSFTFPYPV-----VEQVKPKKCNHRKTVEV----KEPFASYSACQLFNKSPKRAGL 61
           ++   +TFPY V     ++ VK  K  H +TV +    ++ F   S  +L+    +   L
Sbjct: 54  VSPDKYTFPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLY---AENGHL 109

Query: 62  STSDLIFNGYMNIEEK-----GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLD 116
           S +  +F+   NI +K      +  NGY    DS           N + +      S + 
Sbjct: 110 SDAQYLFD---NIPQKDSVLWNVMLNGYVKNGDS----------GNAIKIFLEMRHSEIK 156

Query: 117 KQFVIE--VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
              V    VLS C+ E  L+LG + H +     +  D  V  +L+ MY+KC  +++   +
Sbjct: 157 PNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKL 216

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              +P  D+ S N +++GY +N L  +A   F  +    ++P+  T+++ L     L ++
Sbjct: 217 FDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSL 276

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR---NVISWTAII 291
              K++H   ++   +    + +AL+ +Y KC    D E   + L Q    + +  T +I
Sbjct: 277 KHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC---RDVEMAQKNLCQSSSFDTVVCTTMI 333

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           +G+  +G  ++ L     + ++ + P   TF+    + A L   ++G   H  +IK  + 
Sbjct: 334 SGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLD 393

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               VG+AI+DMY+  G +  A +    + +   ++ WN+ I    +N +  EAI  F Q
Sbjct: 394 EKCHVGSAILDMYAKCGRLDLACRVFNRITEK-DAICWNSMITSCSQNGRPGEAINLFRQ 452

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M       D  + S  L AC+ LP+L   ++IH  ++K    S+++  SSLI+ Y KCG+
Sbjct: 453 MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGN 512

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
              + RVF ++   + VSWNS+I AY  +G  ++ + LF +M+  GI+P + TFL ++SA
Sbjct: 513 LNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISA 572

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C H+G V +G + +  M +EYGI     HY+C+ D+ GRAG+L  A   I+++P  P A 
Sbjct: 573 CGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAG 632

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L  AC  H ++++AE  SK + +LDP ++  YV L+N+ A AG      + R +MK
Sbjct: 633 VWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMK 692

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
            + + K PG SWIEV N  + F + + SH    ++Y  L  L+ +++  G+ 
Sbjct: 693 ERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYV 744



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 225/442 (50%), Gaps = 7/442 (1%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY + G +K    +   +     ++ N ++ G+     F+ A  F+LK+ G  V P+ YT
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGL 279
           +  ++  C  L ++  GK +H +T+ L  L +   V ++L+ +Y + G + DA+ +F+ +
Sbjct: 61  FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            Q++ + W  ++NG+ ++GD    +++   MR   I PN  TF   L+ CAS     +G 
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H   +  G+ L   V   ++ MYS   +  +A ++L +    +  VSWN  I+G+ +N
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKC-QCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               EA   F  M+      D  T++S L   + L SL  C++IH  I++     +V + 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           S+LI+ Y KC   E A++   Q ++ D V   +MI  Y  NG+ ++A+  F  +V E ++
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIAL 578
           PT+ TF ++  A +    +  G+++  S++K    L E+ H  S ++D+  + G+L++A 
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK--LDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 579 IFISNLPIKPTAPIWRPLFAAC 600
              + +  K  A  W  +  +C
Sbjct: 417 RVFNRITEK-DAICWNSMITSC 437


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 209/716 (29%), Positives = 370/716 (51%), Gaps = 46/716 (6%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A +++++ P +  +ST+ +I +GY+ + +   +R+ +    D+ PD  +    + T+ +
Sbjct: 62  AALKVYDEMPHKNTVSTNTMI-SGYVKMGDLSSARHLF----DAMPDRTV---VTWTILM 113

Query: 107 TCYSLESLLDKQFVI-----------------EVLSYCSREECLELGRRYHALITKTAVC 149
             Y+  +  D+ F +                  +L  C+         + HA   K    
Sbjct: 114 GWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 173

Query: 150 GDQFVTA--SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFL 207
            + F+T    L+  Y +   +     + +++   D  + N L+ GY K+ L+ +A   FL
Sbjct: 174 TNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFL 233

Query: 208 KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
           K+     +P+ +T+S +L     L     G+QLH  ++   +    +V N +L  Y K  
Sbjct: 234 KMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHD 293

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            + +  ++F  + + + +S+  +I+ + Q   YE+ L L   M+  G D   + F   L+
Sbjct: 294 RVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLS 353

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
             A+L +  +G   H Q I   +A  D    VG ++VDMY+      EA+   K + +  
Sbjct: 354 IAANLSSLQVGRQVHCQAI---VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQR- 409

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
           S+VSW A I+G+ +       ++ F++M   +   D+ T++++LKA +   SL   +Q+H
Sbjct: 410 STVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLH 469

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           + I++S    NV  GS L++ Y KCGS +DA +VF ++   + VSWN++I AY+ NG   
Sbjct: 470 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGE 529

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            AI  F KM+  G++P + + L VL ACSH G V+ G + F++M   YGI P++ HY+CM
Sbjct: 530 AAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACM 589

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DD 623
           +DLLGR G+   A   +  +P +P   +W  +  ACR + +  +AE  ++Q+  ++   D
Sbjct: 590 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRD 649

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
           AA YV++SN+YA AG   +    +K M+ + I K P  SW+EV +KI+ F S +++H   
Sbjct: 650 AAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 709

Query: 684 PKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLP 728
            ++ +K+ +L  +IE  G+  +            K + + YHSERLAV F LIS P
Sbjct: 710 DEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTP 765



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 241/529 (45%), Gaps = 38/529 (7%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK- 195
           RR  A I KT    D   +   V    + G + + + V  +MP+ +  S N +++GY K 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 196 ------------------------------NALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
                                         N  FD+AF  F ++      P++ T++T+L
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSK--TAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
             C      +   Q+HA  +KL + +     V N LL  Y +   ++ A  +FE ++ ++
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKD 208

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            +++  +I G+++ G Y + + L   MR+ G  P+++TF+  L +   L +  +G   H 
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHG 268

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +  G +    VG  I+  YS    + E +    EM      VS+N  I+ + + ++ E
Sbjct: 269 LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEM-PELDFVSYNVVISSYSQAEQYE 327

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           E++  F +M         F ++++L   + L SL    Q+H + + +  +S +HVG+SL+
Sbjct: 328 ESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLV 387

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KC  +++AE +F  L+    VSW ++I  Y Q G     + LF KM    +R   S
Sbjct: 388 DMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQS 447

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF  VL A +    +  G+++   +++  G L      S +VD+  + G ++ A+     
Sbjct: 448 TFATVLKASAGFASLLLGKQLHAFIIRS-GNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 506

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTL 630
           +P +  A  W  L +A   + D + A     ++++  L PD  ++   L
Sbjct: 507 MPDR-NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVL 554


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 209/696 (30%), Positives = 366/696 (52%), Gaps = 45/696 (6%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID-DGCSNTVPV 106
           A QLF K P +  +ST +++ +GY+     G +R  +        DG ++    + T+ +
Sbjct: 66  ARQLFEKMPHKNTVST-NMMISGYVKSGNLGEARKLF--------DGMVERTAVTWTILI 116

Query: 107 TCYSLESLLDKQFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
             YS  +   + F + V +  C  E        Y   +T  + C          N +   
Sbjct: 117 GGYSQLNQFKEAFELFVQMQRCGTEP------DYVTFVTLLSGC----------NGHEMG 160

Query: 166 GDIKSMVAVVKQMPYLD-IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
             I  +   + ++ Y   +   N L+  Y K+   D A   F ++  ID     +T++ +
Sbjct: 161 NQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEID----SFTFAAV 216

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L     L  I  G+Q+H+  +K  ++    VSNALL  Y K   + DA  +F+ + +++ 
Sbjct: 217 LCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDG 276

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +S+  II+G+   G ++    L   ++    D  ++ F   L+  ++  +  MG   HAQ
Sbjct: 277 VSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQ 336

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            I         VG ++VDMY+  G+  EA+     +    S+V W A I+ + +    EE
Sbjct: 337 TIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR-SAVPWTAMISAYVQKGFYEE 395

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
            ++ F++M +     D+ T++S+L+A + + SL+  +Q+HS I+KS F SNV  GS+L++
Sbjct: 396 GLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLD 455

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y KCGS +DA + F ++   ++VSWN+MI AY+QNG A   +  F++MV+ G++P + +
Sbjct: 456 VYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVS 515

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           FL VLSACSHSGLV++G   F SM + Y + P   HY+ +VD+L R+G+   A   ++ +
Sbjct: 516 FLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEM 575

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAAVYVTLSNMYAEAGLQADA 643
           PI P   +W  +  ACR H + ++A   + Q+  ++   DAA YV +SN+YA AG   + 
Sbjct: 576 PIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENV 635

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-- 701
            +  K M+ + + K P  SW+E+ ++ + F + ++ H ++ ++ +K+  L + +E++G  
Sbjct: 636 SKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYK 695

Query: 702 -------HTDNE--KEDRVLYHSERLAVGFGLISLP 728
                  H ++E  K + + YHSERLA+ F LIS P
Sbjct: 696 PDTSCALHNEDEKFKVESLKYHSERLAIAFALISTP 731



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 184/396 (46%), Gaps = 25/396 (6%)

Query: 215 QPNHYTYSTMLAICGSLSA----IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           +PN     T L    SL +    ++    + A+ +K  +   T+ SN  +  ++K G + 
Sbjct: 5   RPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELS 64

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASC 329
            A  +FE +  +N +S   +I+G+ + G+  +  +L      DG ++    T+T+ +   
Sbjct: 65  QARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLF-----DGMVERTAVTWTILIGGY 119

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL------GEIWEAKKQLKEMGKS 383
           + L      +    Q+ + G    D+V    V + SG        +I + + Q+ ++G  
Sbjct: 120 SQLNQFKEAFELFVQMQRCGTE-PDYV--TFVTLLSGCNGHEMGNQITQVQTQIIKLGYD 176

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
           +  +  N  +  + ++ + + A + F +M       D FT++++L A   L  +   +QI
Sbjct: 177 SRLIVGNTLVDSYCKSNRLDLACQLFKEM----PEIDSFTFAAVLCANIGLDDIVLGQQI 232

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           HS ++K+ F  NV V ++L++ Y+K  S  DA ++F ++   D VS+N +I  Y+ +G+ 
Sbjct: 233 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 292

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           + A  LF ++           F  +LS  S++   + G+++    +       E    + 
Sbjct: 293 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTAD-SEILVGNS 351

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +VD+  + GK E A +  +NL  +   P W  + +A
Sbjct: 352 LVDMYAKCGKFEEAEMIFTNLTHRSAVP-WTAMISA 386


>gi|15240665|ref|NP_199850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171167|sp|Q9FK33.1|PP427_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g50390, chloroplastic; Flags: Precursor
 gi|9758921|dbj|BAB09458.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008555|gb|AED95938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 320/556 (57%), Gaps = 17/556 (3%)

Query: 199 FDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
           F +AF  F  L+     +    TY  ++  C  L +I   K+++   M   +  +  + N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
            +L M++KCGM+ DA  +F+ + +RN+ S+ +II+GF   G+Y +   L  +M E+  D 
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             +TF V L + A L + ++G   H   +K G+    FV   ++DMYS  G+I +A+   
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           + M +  ++V+WN  IAG+  +  +EEA+     M  +  + D+FT S +++  + L  L
Sbjct: 283 ECMPEK-TTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              +Q H+ ++++ FES +   ++L++ Y+K G  + A  VF +L   +++SWN+++  Y
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           + +GR   A+ LFEKM+   + P + TFLAVLSAC++SGL + G ++F SM + +GI P 
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CM++LLGR G L+ A+ FI   P+K T  +W  L  ACR   +L++   +++++ 
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY 521

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
            + P+    YV + NMY   G  A+A    + ++ K +S  P C+W+EV ++ + F S +
Sbjct: 522 GMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581

Query: 678 K--SHSEMPK--VYEKLKQLMQQIEDIGHTDNEK----------EDRV-LYHSERLAVGF 722
           +  S++E  K  +Y+K+ +LM++I + G+++ E+          E+RV  YHSE+LA+ +
Sbjct: 582 RFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAY 641

Query: 723 GLISLPAKNKFECSRT 738
           GL++ P  N  + ++ 
Sbjct: 642 GLVNTPEWNPLQITQN 657



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 132/554 (23%), Positives = 242/554 (43%), Gaps = 81/554 (14%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C R + +   +R +  +       +Q++   ++ M+ KCG I     +  ++P  ++ S 
Sbjct: 133 CIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSY 192

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++G+     + +AF  F  +         +T++ ML     L +I  GKQLH   +K
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
           L  +  T VS  L+ MY KCG +EDA   FE + ++  ++W  +I G+  HG  E+ L L
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
           +  MR+ G+  +++T ++ +     L    +    HA +I+ G        TA+VD YS 
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  A+    ++ +  + +SWNA + G+  + +  +A++ F +M+  + A +  T+ +
Sbjct: 373 WGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431

Query: 427 ILKACS----------LLPSLATCEQIHSR-----------------------IVKSKFE 453
           +L AC+          +  S++    I  R                       I ++  +
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491

Query: 454 SNVHVGSSLIEAYNKCGSWEDAE--RVFSQ----LTAADVVSWNSMIKAYSQNGRARKAI 507
           + V++ ++L+   N C   E+ E  RV ++    +    + ++  M   Y+  G+  +A 
Sbjct: 492 TTVNMWAALL---NACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG-------------QKVFESM--VKEY 552
            + E +  +G+    +     +   +HS L  D              QKV E M  + EY
Sbjct: 549 GVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEY 608

Query: 553 GILPEEAHYSCMVD-----LLGR--AGKLEIALIFISNLPIKPTAPIWRPL-----FAAC 600
           G   EE H    VD      +GR  + KL IA   ++        P W PL        C
Sbjct: 609 GYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVN-------TPEWNPLQITQNHRIC 661

Query: 601 R-CHSDLKMAEFIS 613
           + CH   K+ EFIS
Sbjct: 662 KNCH---KVVEFIS 672


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 174/522 (33%), Positives = 292/522 (55%), Gaps = 2/522 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ G+  HA      V  +  +  +LVNMY++C  I+  + V K  P  D+     +++G
Sbjct: 236 LQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISG 295

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            A+N  F +A + F K++   V  +++TY +ML++C S+ ++D G+Q+H++ ++      
Sbjct: 296 LAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDD 355

Query: 253 TAVSNALLTMYIKCG-MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             V NAL+ MY+KC  ++E    +F G+   NVISWT++I GF +HG  +  L L   MR
Sbjct: 356 VPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMR 415

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             G+ PN +T ++ L  C+++++ +     H  +IK        VG A+VD Y+G G + 
Sbjct: 416 TVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVD 475

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A + +K+M +   S+++ +      +    E A+   S M   D   D F+ +    A 
Sbjct: 476 DAWRVVKDMNQR-DSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSAS 534

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L  + T +Q+H   +KS     + V + LI+ Y K G   +A R F+++T  DVVSWN
Sbjct: 535 ASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWN 594

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I   + NG    A+  F+ M + GI+P + TFL VLS CSH GLV  G + F SM + 
Sbjct: 595 GLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREM 654

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           + + P+  HY C+VD+LGRAG+LE A+  I  +P++P A I++ L AAC  H ++ + E 
Sbjct: 655 HDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGED 714

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           ++++ LEL+P D A ++ L  +Y + G     E+ R+ +K K
Sbjct: 715 VARRGLELNPLDPAFHLLLVKLYDDCGRYDLGEKTRRSIKQK 756



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 218/413 (52%), Gaps = 4/413 (0%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +V+S C+ +  L+ G   H+ I K  +    ++  +L+++Y+KC  ++       +MP  
Sbjct: 25  KVVSLCNLKS-LKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCR 83

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S   +L+ + KN   ++A   F  +      PN +T+S++L  C +L     GK++H
Sbjct: 84  DVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIH 143

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A ++K  + S   + ++L+ +Y +    EDA  +F  +   + +SWT +I    Q G   
Sbjct: 144 ASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCS 203

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             LR+   M E  +  NE+TF V L + +S      G + HA  I  G+ L   + TA+V
Sbjct: 204 HALRIYMEMLEAQVSSNEFTF-VRLLAASSFIGLQYGKLIHAHAIVLGVKLNLVLKTALV 262

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MYS    I +A K + ++      + W A I+G  +N K +EA+ AF +M  +  +   
Sbjct: 263 NMYSRCQRIEDAIK-VSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASN 321

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW-EDAERVFS 480
           FTY S+L  C  + SL    QIHSR++++  E +V VG++L++ Y KC    E   R+F 
Sbjct: 322 FTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFR 381

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            + + +V+SW S+I  ++++G  + ++ LF +M   G++P + T   VL  CS
Sbjct: 382 GIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCS 434



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 165/311 (53%), Gaps = 3/311 (0%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S ++++C +L ++ EG  +H+  +KL       ++N LL++Y KC  +E A   F+ +  
Sbjct: 24  SKVVSLC-NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPC 82

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+V+SWT I++   ++  +E+ L +   M   G  PN +TF+  L SC +L +   G   
Sbjct: 83  RDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRI 142

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA  IK G      +G++++D+YS      +A K    M  S  +VSW   IA   +  K
Sbjct: 143 HASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYM-DSGDTVSWTTVIASCVQAGK 201

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
              A+  + +M+    + +EFT+  +L A S +  L   + IH+  +    + N+ + ++
Sbjct: 202 CSHALRIYMEMLEAQVSSNEFTFVRLLAASSFI-GLQYGKLIHAHAIVLGVKLNLVLKTA 260

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L+  Y++C   EDA +V       DV+ W ++I   +QN + ++A+  F KM + G+  +
Sbjct: 261 LVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSAS 320

Query: 522 NSTFLAVLSAC 532
           N T+L++LS C
Sbjct: 321 NFTYLSMLSVC 331



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 144/274 (52%), Gaps = 4/274 (1%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           + S  +L++   G   H+ +IK G+    ++   ++ +YS    +  A++   EM     
Sbjct: 26  VVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEM-PCRD 84

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSW   ++   +N++ EEA++ F  MV +    + FT+SSIL++C  L   +  ++IH+
Sbjct: 85  VVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHA 144

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
             +K  FESN  +GSSLI+ Y++  S EDA ++FS + + D VSW ++I +  Q G+   
Sbjct: 145 SSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSH 204

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ ++ +M+   +     TF+ +L+A S  GL Q G K+  +     G+       + +V
Sbjct: 205 ALRIYMEMLEAQVSSNEFTFVRLLAASSFIGL-QYG-KLIHAHAIVLGVKLNLVLKTALV 262

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           ++  R  ++E A I +S L  +    +W  + + 
Sbjct: 263 NMYSRCQRIEDA-IKVSKLTPEYDVILWTAIISG 295


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 209/677 (30%), Positives = 347/677 (51%), Gaps = 31/677 (4%)

Query: 33  HRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYM-------NIEEKGISRNGYS 85
           H + +       +  A  L N   K   L+ +  IFN  +       N    G S+NG  
Sbjct: 39  HAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGI 98

Query: 86  TRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITK 145
           + + +    F +    + +P   Y+L  +   +         S + C  +GR+ HAL+ K
Sbjct: 99  SSSHTVMQLFREMRAQDILP-NAYTLAGIFKAE--------SSLQSC-TVGRQAHALVVK 148

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
            +  GD +V  SLV MY K G +K +      M Y     C      Y K+ L  Q  S 
Sbjct: 149 MSSFGDIYVDTSLVGMYCKAG-LKYLY-----MVYYGFWLC------YKKDVLRRQLKSS 196

Query: 206 FLKLDGIDVQPNH-YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
              L+  + + +  Y ++ +L+   +   +  G+Q+H  T+K   L   A+SNAL+TMY 
Sbjct: 197 ICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYS 256

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           KC  + +A  +F+    RN I+W+A++ G+ Q+G+  + ++L   M   GI P+EYT   
Sbjct: 257 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVG 316

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +C+ +     G   H+ ++K G     F  TA+VDMY+  G + +A+K    + +  
Sbjct: 317 VLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 376

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
            ++ W + I+G+ +N   EEA+  + +M       ++ T +S+LKACS L +L   +Q+H
Sbjct: 377 VAL-WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 435

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
              +K  F   V +GS+L   Y KCGS ED   VF +    DVVSWN+MI   S NG+  
Sbjct: 436 GHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 495

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ LFE+M+ EG  P + TF+ ++SACSH G V+ G   F  M  ++G+ P+  HY+CM
Sbjct: 496 EALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACM 555

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           VD+L RAG+L+    FI +  I     +WR L +AC+ H + ++  +  ++++ L   ++
Sbjct: 556 VDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRES 615

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           + YV L+ +Y   G   D E   KLM+   +SKE GCSWI + N+ + F   +  H  + 
Sbjct: 616 STYVQLAGIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIE 675

Query: 685 KVYEKLKQLMQQIEDIG 701
           +  + +  + +Q+ + G
Sbjct: 676 ETKDLVSLVSRQMLEEG 692



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 200/418 (47%), Gaps = 48/418 (11%)

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+ +HAQ ++    + T  +N L+  Y KCG +  A S+F  ++ ++V+SW ++I G+ Q
Sbjct: 35  GRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQ 94

Query: 297 HGDYEKP---LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +G        ++L   MR   I PN YT      + +SL++  +G   HA V+K   + G
Sbjct: 95  NGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMS-SFG 153

Query: 354 D-FVGTAIVDMYSGLG---------EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           D +V T++V MY   G           W   K+     +  SS+         F  +K +
Sbjct: 154 DIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSIC--------FLEEKEK 205

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           E+               ++ ++++L + +    +    QIH   VK+     V + ++L+
Sbjct: 206 ESD-------------SDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALV 252

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y+KC S  +A ++F      + ++W++M+  YSQNG + +AI LF +M   GI+P+  
Sbjct: 253 TMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEY 312

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIALIF 580
           T + VL+ACS    + +G+++   ++K    L  E H    + +VD+  +AG L  A   
Sbjct: 313 TIVGVLNACSDICYLVEGKQLHSFLLK----LGFERHLFATTALVDMYAKAGCLADARKG 368

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ-----ILELDPDDAAVYVTLSNM 633
              L  +  A +W  L +    +SD + A  + ++     I+  DP  A+V    S++
Sbjct: 369 FDCLQERDVA-LWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSL 425



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 425 SSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           S++LKA    S   +L     +H++I+++   +     + L+  Y KCG    A  +F+ 
Sbjct: 17  STLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNA 76

Query: 482 LTAADVVSWNSMIKAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           +   DVVSWNS+I  YSQNG    +   + LF +M  + I P   T   +  A
Sbjct: 77  IICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKA 129



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 315 IDPNEYTFTV--ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           I+P  +T T+  AL   +  RN   G   HAQ+I+ G +        +V+ Y+  G++ +
Sbjct: 10  INPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAK 69

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRN---QKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           A      +      VSWN+ I G+ +N     +   ++ F +M   D   + +T + I K
Sbjct: 70  AHSIFNAI-ICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFK 128

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           A S L S     Q H+ +VK     +++V +SL+  Y K G
Sbjct: 129 AESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 169


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 182/546 (33%), Positives = 291/546 (53%), Gaps = 4/546 (0%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            VL  CS     + GR+ H  I K     D FV   LV+MYAKCG+I+   +V  +    
Sbjct: 108 HVLKACSESRNFDEGRKVHCQIVKFGN-PDSFVFTGLVDMYAKCGEIECSRSVFDENLDR 166

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S + ++AGY +N L       F ++    ++ N  T   ++  C  L A+ +GK LH
Sbjct: 167 NVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLH 226

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +K      + +  ALL +Y KCG++ DA SVF+ L   +++SWTA+I G+ Q+G  E
Sbjct: 227 GYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPE 286

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L+L     +  + PN+ T     +SC+ L N ++G   H   IK G +    V  ++V
Sbjct: 287 EALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLV 345

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           D Y+   ++    + + E       V+WN+ I+ F +N    EA+E F QM       D 
Sbjct: 346 DFYAKC-QMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDA 404

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            T  S+L AC+ L +L      H+  VK     SNV+VG++L+  Y KCG  E A  +F 
Sbjct: 405 VTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFD 464

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +     V+W++MI  Y   G  R ++ +F  M+   ++P    F ++LSACSH+G++ +
Sbjct: 465 GMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGE 524

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G ++F  + ++Y ++P   HY+CMVDLL RAG+L+ AL FI  +P++P   ++      C
Sbjct: 525 GWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGC 584

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
             HS   + E   K++LEL P DA  YV + N+YA     +  ++ R+LMK + + K PG
Sbjct: 585 GLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPG 644

Query: 661 CSWIEV 666
           CS +E+
Sbjct: 645 CSLMEM 650



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 229/461 (49%), Gaps = 6/461 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HA +    +  D   +  LV++Y   G +     V   +P+ D  S   ++  Y  N+ F
Sbjct: 25  HAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEF 84

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
                F+ ++     + ++  +S +L  C      DEG+++H Q +K      + V   L
Sbjct: 85  RDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGN-PDSFVFTGL 143

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + MY KCG +E + SVF+  + RNV SW+++I G+ Q+   +  L L   MRE+ I+ N+
Sbjct: 144 VDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQ 203

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T  + + +C  L   H G   H  +IK G+ LG ++ TA++D+Y+  G + +A+    E
Sbjct: 204 ITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDE 263

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           +      VSW A I G+ +N   EEA++ F Q  +     ++ T +S+  +CS L +L  
Sbjct: 264 L-HGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNL 322

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
              IH   +K      + V +SL++ Y KC    DA  VF  ++  DVV+WNS+I A+SQ
Sbjct: 323 GRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQ 381

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           NG A +A+ LF +M +  + P   T ++VLSAC+    +Q G   F +   + G+L    
Sbjct: 382 NGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS-FHAYAVKRGLLSSNV 440

Query: 560 HY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +  + ++    + G  E A +    +  K T   W  + + 
Sbjct: 441 YVGTALLTFYAKCGDAESARVIFDGMDQKSTVT-WSAMISG 480



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 149/301 (49%), Gaps = 2/301 (0%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I+   ++HA  +        + S  L+++Y   G ++ A  VF+ +   + +SW  II  
Sbjct: 18  INTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRW 77

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           +  + ++   +     MR    + +   F+  L +C+  RN   G   H Q++K G    
Sbjct: 78  YFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNP-D 136

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV T +VDMY+  GEI E  + + +     +  SW++ IAG+ +N   ++ +  F++M 
Sbjct: 137 SFVFTGLVDMYAKCGEI-ECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMR 195

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 ++ T   ++ AC  L +L   + +H  ++K   E   ++ ++L++ Y KCG   
Sbjct: 196 EELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVR 255

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA  VF +L   D+VSW +MI  Y+QNG   +A+ LF +     + P + T  +V S+CS
Sbjct: 256 DARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCS 315

Query: 534 H 534
            
Sbjct: 316 Q 316



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  V S CS+   L LGR  H L  K     D  VT SLV+ YAKC   +    V + + 
Sbjct: 307 IASVFSSCSQLLNLNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETIS 365

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ + N +++ +++N    +A   F ++    V P+  T  ++L+ C SL+A+  G  
Sbjct: 366 DRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS 425

Query: 240 LHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            HA  +K   LS    V  ALLT Y KCG  E A  +F+G+ Q++ ++W+A+I+G+   G
Sbjct: 426 FHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQG 485

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +    L +   M +  + PNE  FT  L++C     SH G
Sbjct: 486 NGRGSLSIFGDMLKAELKPNEEIFTSILSAC-----SHTG 520



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 87/191 (45%), Gaps = 3/191 (1%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMV 172
           L D   ++ VLS C+    L++G  +HA   K  +     +V  +L+  YAKCGD +S  
Sbjct: 401 LPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESAR 460

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            +   M      + + +++GY        + S F  +   +++PN   ++++L+ C    
Sbjct: 461 VIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTG 520

Query: 233 AIDEGKQLHAQTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAI 290
            I EG +L     +    +  T     ++ +  + G +++A    + + VQ +V  + A 
Sbjct: 521 MIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAF 580

Query: 291 INGFKQHGDYE 301
           ++G   H  ++
Sbjct: 581 LHGCGLHSRFD 591



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 3/154 (1%)

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           SL  ++ T  ++H+ +V      ++   + L+  Y   G  + A  VF  +   D +SW 
Sbjct: 13  SLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            +I+ Y  N   R  +  + +M V      N  F  VL ACS S    +G+KV   +VK 
Sbjct: 73  VIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVK- 131

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIAL-IFISNL 584
           +G  P+   ++ +VD+  + G++E +  +F  NL
Sbjct: 132 FGN-PDSFVFTGLVDMYAKCGEIECSRSVFDENL 164


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 205/652 (31%), Positives = 334/652 (51%), Gaps = 26/652 (3%)

Query: 111 LESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE LL ++   + +LS C     L L R  HA + +    GD  V  +LV MY +CG + 
Sbjct: 230 LEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVD 289

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML-AIC 228
             +AV + M   +  S N ++A +A+      AF+ + ++     +PN  T+ T L A C
Sbjct: 290 ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAAC 349

Query: 229 GSLSA-IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
            S S  + E   LH             V  AL+TMY   G ++ A + F+ +  +N++SW
Sbjct: 350 SSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSW 409

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A++  +  +G   + + L   M+   + PN+ ++   L  C  +  +      HA+V+ 
Sbjct: 410 NAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARS---IHAEVVG 466

Query: 348 RGM-ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
            G+ A    +   +V M++  G + EA     +      SVSWN ++A     +    AI
Sbjct: 467 NGLFAQESSIANGVVRMFARSGSLEEAVAAF-DATVVKDSVSWNTKVAALSAREDLHGAI 525

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEA 465
            AF  M       D+FT  S++  C+ L +L     I  ++  + + E +V V S+++  
Sbjct: 526 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNM 585

Query: 466 YNKCGSWED-AERVFSQL--TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPT 521
             KCGS  D  ER+F+++     D+V+WN+MI AY+Q+G  RKA+ LF  M     +RP 
Sbjct: 586 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 645

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGKLEIALIF 580
           +STF++VLS CSH+GLV+DG   F    +  GI  +   HY+C+VD+LGR G L  A  F
Sbjct: 646 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDF 705

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  +P+   + +W  L  AC  + DL+  E  ++  +EL   D+  YV LSN+YA AG  
Sbjct: 706 IRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRW 765

Query: 641 ADAEEQRKLMKMKEISKE-PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
            D+   R+ M  + + K  PG S I V N+++ FF++++SH +   +Y +L++L   I +
Sbjct: 766 EDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIRE 825

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            G+            + +KE  + YHSE+LA+ FGLIS+P ++     + L 
Sbjct: 826 AGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLR 877



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 244/524 (46%), Gaps = 14/524 (2%)

Query: 129 REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           R   +   R  H  I  + +  D FV  +L++ Y KCG ++S + V  ++   D+   N 
Sbjct: 147 RAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNA 206

Query: 189 LLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            +   A N    D+A     ++    + PN  ++  +L+ CG  S++   + +HA+  +L
Sbjct: 207 AIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEEL 266

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
            +L    V+ AL+TMY +CG ++++ +VFE +  RN +SW A+I  F Q G       + 
Sbjct: 267 GFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIY 326

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMG--YMFHAQVIKRGMALGDFVGTAIVDMYS 365
             M+++G  PN+ TF  AL +  S  +  +G     H  +   G+     VGTA+V MY 
Sbjct: 327 WRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYG 386

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G I  A+     +  + + VSWNA +  +  N +  EA+E F+ M R   A ++ +Y 
Sbjct: 387 STGAIDRARAAFDAI-PAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 445

Query: 426 SILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           ++L  C     ++    IH+ +V +  F     + + ++  + + GS E+A   F     
Sbjct: 446 AVLGCCE---DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVV 502

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            D VSWN+ + A S       AI  F  M  EG RP   T ++V+  C+  G ++ G+ +
Sbjct: 503 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 562

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKL--EIALIFISNLPIKPTAPIWRPLFAACRC 602
            + +     +  +    S +++++ + G    E   +F      +     W  + AA   
Sbjct: 563 QQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 622

Query: 603 HSDLKMAE---FISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           H   + A     I +Q   + P D++ +V++ +  + AGL  D 
Sbjct: 623 HGHGRKALKLFRIMQQRSSVRP-DSSTFVSVLSGCSHAGLVEDG 665



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 258/581 (44%), Gaps = 34/581 (5%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           CS   P +    +  +  + +  +L  C  +  L  GR+ H  I K  +  +  +   LV
Sbjct: 7   CSWPGPRSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLV 66

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
            MY+KC  +    A    +    IA+ N L+A  +  A     F  + ++   +   N  
Sbjct: 67  QMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRP 123

Query: 220 TYSTMLAICGSLSAID-------------EGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
              T++A+ G++++ D             + + +H             V+ ALL  Y KC
Sbjct: 124 NKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKC 183

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFT 323
           G +E A  VF  +   ++I W A I      G+ E+P R + L+R    +G+ PN  +F 
Sbjct: 184 GCVESALEVFSRIQVPDLICWNAAIMACA--GNDERPDRALLLVRRMWLEGLLPNRASFV 241

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
             L+SC    +  +    HA+V + G  LGD  V TA+V MY   G + E+    + M  
Sbjct: 242 AILSSCGDHSSLPLARSIHARVEELGF-LGDVVVATALVTMYGRCGSVDESIAVFEAMAV 300

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC--SLLPSLATC 440
             + VSWNA IA F +      A   + +M +     ++ T+ + LKA   S    L   
Sbjct: 301 R-NHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGES 359

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
             +H  I  +  E +V VG++L+  Y   G+ + A   F  + A ++VSWN+M+ AY  N
Sbjct: 360 AALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDN 419

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           GRAR+A+ LF  M  + + P   ++LAVL  C     V + + +   +V       E + 
Sbjct: 420 GRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSI 476

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILE 618
            + +V +  R+G LE A+       +K +   W    AA     DL  A   F + Q   
Sbjct: 477 ANGVVRMFARSGSLEEAVAAFDATVVKDSVS-WNTKVAALSAREDLHGAITAFYTMQHEG 535

Query: 619 LDPDDAAVYVTLSNMYAEAG-LQADAEEQRKLMKMKEISKE 658
             PD   + V++ ++ A+ G L+     Q++L    E+ ++
Sbjct: 536 FRPDKFTL-VSVVDVCADLGTLELGRSIQQQLSAAIEVERD 575


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 187/635 (29%), Positives = 331/635 (52%), Gaps = 26/635 (4%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ + ++L   +    +  G + H  + K     D  +  +L++MYAKCG+++    V  
Sbjct: 4   RKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFG 63

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAID 235
            MP  ++ S   L+ G+ ++    +       +  + DV PN +T S  L  CG +  + 
Sbjct: 64  GMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMA 123

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G  +H   ++  +     V+N+L+ +Y K G + DA  VF+G V RN+++W A+I+G+ 
Sbjct: 124 AGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYA 183

Query: 296 QHGDYEKPLRLVCLMR-----EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
             G     L +   M+     E+   P+E+TF   L +C SL  +  G   HA ++ RG+
Sbjct: 184 HAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGV 243

Query: 351 ALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           +      +  A++DMY     +     Q+    +  +++ W   I G  +  + +EA+E 
Sbjct: 244 STASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMEL 303

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +   +    D    SS++   +    +    Q+H   VK+    +V V +SLI+ Y+K
Sbjct: 304 FGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHK 363

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  ++A R F ++ A +VVSW +MI    ++G  ++AI +FE+M  EG+ P    +LA+
Sbjct: 364 CGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSACSHSGLV++ ++ F ++  +  + P   HY+CMVDLLGRAG+L  A   ++ +P+ P
Sbjct: 424 LSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAP 483

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
           T  +W+ L +ACR H ++ +     + +L +D D+   YV LSN++AEAG   + +  R 
Sbjct: 484 TVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRG 543

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRFF-SQNKSHSEMPKVYEKLKQLMQQI-EDIGHT--- 703
            M+ + + K+ GCSW+EV  + + F+   + SH     +   L+ + + + E +G++   
Sbjct: 544 AMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGS 603

Query: 704 ----------DNEKEDR---VLYHSERLAVGFGLI 725
                     D ++E R   +  HSERLAVG  L+
Sbjct: 604 SSSSSEAALHDVDEESRAESLRAHSERLAVGLWLL 638


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 308/594 (51%), Gaps = 4/594 (0%)

Query: 137 RRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           R+ HA    T  +  D  +  +L++MYAKCGDI     V  Q    D+A CN +++ Y +
Sbjct: 202 RKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQ 261

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
                 A S F ++    +QPN  TY+ +   C +     + +  H   +  +      V
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           + AL++MY +CG +EDA  VF+ +  +NV++W  +I G+ Q G  ++ L+L   M   G+
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGV 381

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           +P+E TF   L SC+   +   G   H  V+  G      V +A++ MYS  G + +A  
Sbjct: 382 EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVD 441

Query: 376 QL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              K +   +S +SW A +    RN +   A+  F +M       +  T+ S + ACS +
Sbjct: 442 VFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSI 501

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L     I  R++ + +  +V +G+SLI  Y KCG  + A  VF  L+  ++V+WN+++
Sbjct: 502 GALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTIL 561

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            A SQNG    +  L ++M ++G +P   T L +L  CSH+GLV      F SMV  + +
Sbjct: 562 AASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCL 621

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           +P   HY C+VDLLGR+G+LE    FIS+ P    + +W  L  +C  HSD++     ++
Sbjct: 622 VPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAAR 681

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++L LDP +A+ YV LSNM+A  G+    +   KL   + + KE   S+IEV   ++ F 
Sbjct: 682 RVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFG 741

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLP 728
            +   H    K+  +L++  +++E+ G       D   YH E+LA+ FG IS P
Sbjct: 742 VRAGLHRLGEKIGAQLREWSEEMEEAGFV--PLHDVRGYHDEKLAIAFGAISSP 793



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 251/492 (51%), Gaps = 18/492 (3%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           GD+ +   +V  Y KCG +K    V   + + ++ S   LLA YA+N           ++
Sbjct: 114 GDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQM 173

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ---TMKLQYLSKTAVSNALLTMYIKC 266
           D + V PN  T +T++     L   DE +++HA+   T +L Y     +  AL+ MY KC
Sbjct: 174 DLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTY--DVVLVTALIDMYAKC 231

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G +  AE VF+    +++    A+I+ + Q G     +     ++  G+ PN+ T+ +  
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-GKSAS 385
            +CA+        + H   I   +     V TA+V MYS  G + +A++    M GK+  
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNV- 350

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+WN  IAG+ +   T+EA++ +  M       DE T+ ++L++CSL   LA    IH 
Sbjct: 351 -VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRA 503
            +V + ++S++ V S+LI  Y+ CGS  DA  VF +   T + V+SW +M+ A ++NG  
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           R A+ LF KM +EG++    TF++ + ACS  G + +G  +FE ++   G L +    + 
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVT-GYLIDVVLGTS 528

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-ELDPD 622
           +++L G+ G+L+ AL    +L  K     W  + AA    S     E +S ++L E+D D
Sbjct: 529 LINLYGKCGRLDYALEVFHHLSFKNIVT-WNTILAA----SSQNGEETLSAELLQEMDLD 583

Query: 623 DAAVY-VTLSNM 633
            A    +TL NM
Sbjct: 584 GAQPNEMTLLNM 595



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 169/402 (42%), Gaps = 19/402 (4%)

Query: 93  DGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           +G+ D+     V +    +E   D+   + VL  CS  E L  GR  H  +         
Sbjct: 363 EGYTDEALQLYVSMEAAGVEP--DEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSL 420

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQ--MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
            V ++L+ MY+ CG +   V V  +    +  + S   +L    +N     A + F K+D
Sbjct: 421 TVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD 480

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V+ N  T+ + +  C S+ A+ EG  +  + +   YL    +  +L+ +Y KCG ++
Sbjct: 481 LEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLD 540

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VF  L  +N+++W  I+    Q+G+      L+  M  DG  PNE T    L  C 
Sbjct: 541 YALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGC- 599

Query: 331 SLRNSHMGYMFHAQVIKRGMALGD-FVGTA-----IVDMYSGLGEIWEAKKQLKEMGKSA 384
               SH G +  A    R M  G   V T+     +VD+    G++ E +  +     S 
Sbjct: 600 ----SHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSL 655

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA--ACDEFTYSSILKACSLLPSLATCEQ 442
            SV W + +     +   E  + A  +++  D   A      S++  A  +L ++ +  +
Sbjct: 656 DSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAK 715

Query: 443 IHSR--IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +     + K +  S + V   + E   + G     E++ +QL
Sbjct: 716 LAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQL 757



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 4/156 (2%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAERV 478
           D   Y S+LK    + +L T   I + I  SK F  +  + + ++EAY KCG  +DA  V
Sbjct: 82  DPAAYVSLLKQAGDVTALKT---IQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLV 138

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           FS +   +V SW  ++ AY+QNG  +  + L  +M + G+ P   T   V+ A S  G  
Sbjct: 139 FSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDW 198

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            + +K+         +  +    + ++D+  + G +
Sbjct: 199 DEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDI 234


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 315/596 (52%), Gaps = 45/596 (7%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N LL  +++    +   S +L L       + +++  +L     LSA++ G ++H    K
Sbjct: 84  NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143

Query: 247 LQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
             +  +   + +AL+ MY  CG + DA  +F+ +  R+V++W  +I+G+ Q+  Y+  L+
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   M+  G +P+       L++CA   N   G   H  +   G  +G  + T++V+MY+
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263

Query: 366 GLGEIWEAKK---QL--KEMGKSASSVS-------------------------WNAQIAG 395
             G +  A++   QL  K M  S + +S                         W+A I+G
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           +  + +  EA++ F++M R     D+ T  S++ AC+ + +L   + IH+   K+ F   
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRT 383

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + + ++LI+ Y KCG+   A  VF  +   +V+SW+SMI A++ +G A  AI LF +M  
Sbjct: 384 LPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKE 443

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + I P   TF+ VL ACSH+GLV++GQK F SM+ E+ I P+  HY CMVDL  RA  L 
Sbjct: 444 QNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLR 503

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A+  I  +P  P   IW  L +AC+ H ++++ EF + ++LEL+PD     V LSN+YA
Sbjct: 504 KAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYA 563

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
           +     D    RKLMK K +SKE  CS IEV N+++ F   ++ H +  ++Y+KL  ++ 
Sbjct: 564 KEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVS 623

Query: 696 QIEDIGHTDNEKEDRV-----------LYHSERLAVGFGLISLPAKNKFECSRTLE 740
           Q++ +G+T +     V           L+HSE+LA+ +GLI    + K  C R ++
Sbjct: 624 QLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLI---GERKESCIRIVK 676



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/465 (22%), Positives = 201/465 (43%), Gaps = 76/465 (16%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVA 173
           LD+     +L   S+   L LG   H L +K      D F+ ++L+ MYA CG I     
Sbjct: 113 LDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARF 172

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           +  +M + D+ + N ++ GY++NA +D     + ++     +P+     T+L+ C     
Sbjct: 173 LFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGN 232

Query: 234 IDEGKQLH------------------------------AQTMKLQYLSK-TAVSNALLTM 262
           +  GK +H                              A+ +  Q  SK   VS A+L+ 
Sbjct: 233 LSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSG 292

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y K GM++DA  +F+ +V+++++ W+A+I+G+ +     + L+L   M+   I P++ T 
Sbjct: 293 YAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITM 352

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
              +++CA++         H    K G      +  A++DMY+  G + +A++  + M +
Sbjct: 353 LSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPR 412

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
             + +SW++ I  F  +   + AI  F +M   +   +  T+  +L ACS          
Sbjct: 413 K-NVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACS---------- 461

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS-----WNSMIKAY 497
            H+ +V                        E+ ++ FS +     +S     +  M+  Y
Sbjct: 462 -HAGLV------------------------EEGQKFFSSMINEHRISPQREHYGCMVDLY 496

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            +    RKA+ L E M      P    + +++SAC + G ++ G+
Sbjct: 497 CRANHLRKAMELIETMPFP---PNVIIWGSLMSACQNHGEIELGE 538


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 198/629 (31%), Positives = 325/629 (51%), Gaps = 47/629 (7%)

Query: 151  DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD------------IASCNCL--LAGYAKN 196
            D F+   L+  Y   G  +  V++  +M Y D            + +C+    L+   KN
Sbjct: 410  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKN 469

Query: 197  ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--------GSLSAIDEGKQLHAQTMK-- 246
                +    F ++    V+P+  T  ++   C        G L  + EG+ +H   ++  
Sbjct: 470  GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRA 529

Query: 247  ----LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                L +L       AL+ +Y   G + D   VFE + ++ ++SW  +I+ F ++G  E+
Sbjct: 530  MDPELDFLGP-----ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEE 584

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             L L   M+  G+ P+ Y+   +L++C ++  S +G   H  +IK G    DFV  A++D
Sbjct: 585  ALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALID 643

Query: 363  MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            MY+  G +  A K  +++ K  S V+WN+ I GF +N  + EAI  F QM  N    D+ 
Sbjct: 644  MYAKCGFVHSANKMFEKI-KEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKL 702

Query: 423  TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            T+ S+++ACS L  L   + +H +++      + ++ ++L + Y+KCG  + A  VF ++
Sbjct: 703  TFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 762

Query: 483  TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
            +   +VSW+ MI  Y  +G+    I LF +M+  GI+P + TF+ +LSACSH+G V++G+
Sbjct: 763  SERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 822

Query: 543  KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
              F SM  E+G+ P+  H++CMVDLL RAG L  A   I++LP    + IW  L   CR 
Sbjct: 823  LYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 881

Query: 603  HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
            H  + + + I K +L++D  D   Y  LSN+YAE G      + R +MK K + K PG S
Sbjct: 882  HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 941

Query: 663  WIEVYNKIYRFFSQNKSHSEMPKVY---EKLKQLMQ-QIED-------IGHTDNEKEDRV 711
             IE+  KIYRF   + SHS+   +Y   E  + L+  Q+ D       +G +   KE+ V
Sbjct: 942  TIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNV 1001

Query: 712  LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + HSE+LA+ FG+I+         S+ L 
Sbjct: 1002 VSHSEKLAIAFGIINTRPGTTLRISKNLR 1030



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 111/253 (43%), Gaps = 23/253 (9%)

Query: 46  YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
           +SA ++F K  +++ ++ + +I          G S+NGYS    +  D          + 
Sbjct: 652 HSANKMFEKIKEKSLVTWNSMIC---------GFSQNGYSVEAITLFD---------QMY 693

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           + C  +    DK   + V+  CS    LE G+  H  +    +  D ++  +L +MY+KC
Sbjct: 694 MNCVKM----DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 749

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
           G+++    V  +M    I S + ++AGY  +   +   S F ++ G  ++PN  T+  +L
Sbjct: 750 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 809

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNV 284
           + C    A++EGK       +     K      ++ +  + G +  A  +   L    N 
Sbjct: 810 SACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS 869

Query: 285 ISWTAIINGFKQH 297
             W A++NG + H
Sbjct: 870 SIWGALLNGCRIH 882



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 55/264 (20%)

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA +   G+       T +++ Y+ +G I+E+ K++ +      S  W   I  +    
Sbjct: 367 LHAHLFITGLHRHPPASTKLIESYAQIG-IFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 401 KTEEAIEAFSQMVRND-AACDEFTYSSILKACS--------------------------- 432
             EEA+  + +MV  D      F + S+LKACS                           
Sbjct: 426 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE 485

Query: 433 --------LLPSLATCEQIHS----RIVKSKFESNVH--------------VGSSLIEAY 466
                   +L     C ++ S    R+ + K   +VH              +G +L+E Y
Sbjct: 486 AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 545

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
              G+  D  +VF  +    ++SWN++I  +++NG+  +A++LF +M  +G+ P + +  
Sbjct: 546 ADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLA 605

Query: 527 AVLSACSHSGLVQDGQKVFESMVK 550
           + LSAC      Q G ++   ++K
Sbjct: 606 SSLSACGTISFSQLGAQIHGYIIK 629



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 10/124 (8%)

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
            T  Q+H+ +  +    +    + LIE+Y + G +E ++RVF      D   W  +IK Y
Sbjct: 362 TTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCY 421

Query: 498 SQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACS---------HSGLVQDGQKVFES 547
              G   +A+ L+ +MV +   + +N  F +VL ACS          +G   +G  +F  
Sbjct: 422 VWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQ 481

Query: 548 MVKE 551
           M+ E
Sbjct: 482 MISE 485


>gi|242039301|ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
 gi|241920899|gb|EER94043.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
          Length = 564

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 177/538 (32%), Positives = 302/538 (56%), Gaps = 2/538 (0%)

Query: 127 CSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIAS 185
           C R   +  GR  HA L+   A     F+   L+ MY+ C D  S V V   +P  +  S
Sbjct: 27  CGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPVS 86

Query: 186 CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
              L++G  +N++   A + F  +    V P  +  S+      +LSA   G QLH    
Sbjct: 87  WTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIGT 146

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           +  + ++  V++ L  MY KCG++++A  VF+ +  R+ ++WT +I+G+ ++G  +  + 
Sbjct: 147 RFGFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAIL 206

Query: 306 LVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
               M+ +G +  +++ F  AL++   L++   G   H  +IK G  L   V  A++DMY
Sbjct: 207 AFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           +  G++  A + +K      + VS  + I G+    + EEA+E ++++ R     +EFT+
Sbjct: 267 AKSGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFTF 326

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           +S++K C++   L    Q+H++++K+   S+  VGS+L+  Y KCG    + ++F+++  
Sbjct: 327 ASMIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGY 386

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
              V+WN++I  Y+Q+G    AI  F++M   GIRP + TF+ +L+ACSH+GLV +G + 
Sbjct: 387 HSEVAWNAVINVYAQHGHGWGAIQAFDRMTASGIRPNHITFVCLLTACSHAGLVDEGLEY 446

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           F SM   +GI P+E HYSC++D+ GRAG+L+ A  FIS +P+KP A  W  L  ACR   
Sbjct: 447 FYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRG 506

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + ++ E  ++ +++LDPD+  ++V+LS +YA  G   DA+  RKLMK   I   PG S
Sbjct: 507 NKELGEIAAQNLMKLDPDNTGIHVSLSGIYASLGQWEDAKSVRKLMKDSSIKNLPGFS 564



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 199/465 (42%), Gaps = 12/465 (2%)

Query: 228 CGSLSAIDEGKQLHAQTMKL-QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
           CG    I  G+ LHA+ +      + T ++N L+TMY  C     A  VF  L + N +S
Sbjct: 27  CGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPVS 86

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           WT +++G  Q+  +   L     MR   + P ++  + A  + A+L     G   H    
Sbjct: 87  WTTLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIGT 146

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           + G     FV + + DMYS  G + EA +   +M     +V+W   I G+ +N   + AI
Sbjct: 147 RFGFDTELFVASNLADMYSKCGLLDEACRVFDQM-PHRDAVTWTTMIDGYAKNGSLKAAI 205

Query: 407 EAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
            AF  M        D+  + S L A   L        +H  I+K+ FE    V ++L++ 
Sbjct: 206 LAFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDM 265

Query: 466 YNKCGSWEDAERVFS-QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y K G  E A RV        +VVS  S+I  Y +  R  +A+  + ++  +G+ P   T
Sbjct: 266 YAKSGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFT 325

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F +++  C+   L++ G ++   ++K   ++ +    S +V + G+ G + ++L   + +
Sbjct: 326 FASMIKGCAMQDLLEQGAQLHAQVIKT-SLISDSFVGSTLVYMYGKCGLISLSLQLFNEI 384

Query: 585 PIKPTAPIWRPLFA--ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
                   W  +    A   H    +  F       + P+    +V L    + AGL  +
Sbjct: 385 GYHSEVA-WNAVINVYAQHGHGWGAIQAFDRMTASGIRPNH-ITFVCLLTACSHAGLVDE 442

Query: 643 AEEQRKLMKMK---EISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             E    MK     E  +E     I++Y +  R     K  SEMP
Sbjct: 443 GLEYFYSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMP 487


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 180/539 (33%), Positives = 288/539 (53%), Gaps = 2/539 (0%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C R      GRR H  + K A   D FV  SLV+MYAK GD+++   V  ++P  ++
Sbjct: 130 LKACVRSADFRYGRRLHCDVVK-AGGADGFVMNSLVDMYAKAGDLENARKVFDRVPERNV 188

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            S   +L+G  +N + ++    F ++   +V P+ YT  ++LA C  L  + +G+ +H  
Sbjct: 189 VSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGS 248

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K    + + +S +LL MY KC  +EDA  VF+ L   +++ WTA+I G+ Q+      
Sbjct: 249 VIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDA 308

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L+L    +   I PN  T    +++ A LR+  +G   HA  +K G    D V  A+VDM
Sbjct: 309 LQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDM 368

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y+    + EA      +      V+WN+ +AG+  N    E++  F++M     + D  +
Sbjct: 369 YAKCQALPEANSIFGRI-LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAIS 427

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
             + L AC  L  L   +  H+  +K  F SN++V ++L+  Y+KC     A+RVF+ +T
Sbjct: 428 VVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMT 487

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             + V+W++MI  Y   G +  +I LF +M+ E I P    F ++LSACSH+G+V  G++
Sbjct: 488 DRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKE 547

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            F+SM + + I P   HY+CMVD++ RAG LE AL FI N+PIK    +W      C+ H
Sbjct: 548 YFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLH 607

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           S L+  E   K++  L P+    YV +SN+Y   G    ++  R+ M+ + + K PGCS
Sbjct: 608 SRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCS 666



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 241/511 (47%), Gaps = 27/511 (5%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           +A ++F++ P+R  +S + ++     N    GI+  G    N+   D        N  P 
Sbjct: 175 NARKVFDRVPERNVVSWTSMLSGSIQN----GIAEEGLVLFNEMRQD--------NVHP- 221

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                     +  ++ VL+ C+    L  GR  H  + K  +  + F++ASL++MYAKC 
Sbjct: 222 ---------SEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCE 272

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            ++    V  ++ ++DI     ++ GY +N     A   FL    + + PN  T +T+++
Sbjct: 273 KVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVIS 332

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
               L  +  G+ +HA  +KL  +    V NAL+ MY KC  + +A S+F  ++ ++V++
Sbjct: 333 ASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVA 392

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W +++ G+ ++G   + L L   MR  GI P+  +   AL++C  L + H+G  FH   I
Sbjct: 393 WNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAI 452

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K       +V TA++++YS   ++  A++   +M    +SV+W+A I G+     +  +I
Sbjct: 453 KYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDM-TDRNSVTWSAMIGGYGMQGDSAGSI 511

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEA 465
           + F++M++ +   +E  ++SIL ACS    +   ++    + +      ++   + +++ 
Sbjct: 512 DLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDV 571

Query: 466 YNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
             + G+ E+A E + +    A +  W S +     + R        +KM    + P    
Sbjct: 572 MARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMA--ALHPETPD 629

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           F  ++S    S    D  +     ++E G++
Sbjct: 630 FYVLMSNLYTSYGRWDKSQTIRRWMQEQGLV 660


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 205/652 (31%), Positives = 335/652 (51%), Gaps = 26/652 (3%)

Query: 111 LESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           LE LL ++   + +LS C     L L R  HA + +    GD  V  +LV MY +CG + 
Sbjct: 226 LEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVD 285

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML-AIC 228
             +AV + M   +  S N ++A +A+      AF+ + ++     +PN  T+ T L A C
Sbjct: 286 ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAAC 345

Query: 229 GSLSA-IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
            S S  + E   LH             V  AL+TMY   G ++ A + F+ +  +N++SW
Sbjct: 346 SSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSW 405

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            A++  +  +G   + + L   M+   + PN+ ++   L  C  +  +      HA+V+ 
Sbjct: 406 NAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARS---IHAEVVG 462

Query: 348 RGM-ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
            G+ A    +   +V M++  G + EA     +      SVSWN ++A     +    AI
Sbjct: 463 NGLFAQESSIANGVVRMFARSGSLEEAMAAF-DATVVKDSVSWNTKVAALSAREDLHGAI 521

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEA 465
            AF  M       D+FT  S++  C+ L +L     I  ++  + + E +V V S+++  
Sbjct: 522 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNM 581

Query: 466 YNKCGSWED-AERVFSQL--TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPT 521
             KCGS  D  ER+F+++     D+V+WN+MI AY+Q+G  RKA+ LF  M     +RP 
Sbjct: 582 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 641

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGKLEIALIF 580
           +STF++VLS CSH+GLV+DG   F    +  GI  +   HY+C+VD+LGR G L  A  F
Sbjct: 642 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDF 701

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  +P+   + +W  L  AC  + DL+  E  ++  +EL   D+  YV LSN+YA AG  
Sbjct: 702 IRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRW 761

Query: 641 ADAEEQRKLMKMKEISKE-PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
            D+   R+ M  + + K  PG S I V N+++ FF++++SH +  ++Y +L++L   I +
Sbjct: 762 EDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGLIRE 821

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            G+            + +KE  + YHSE+LA+ FGLIS+P ++     + L 
Sbjct: 822 AGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLR 873



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/502 (26%), Positives = 237/502 (47%), Gaps = 14/502 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN-ALFDQAFSFFLKL 209
           D FV  +L++ Y KCG ++S + V  ++   D+   N  +   A N    D+A     ++
Sbjct: 165 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 224

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
               + PN  ++  +L+ CG  S++   + +HA+  +L +L    V+ AL+TMY +CG +
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +++ +VFE +  RN +SW A+I  F Q G       +   M+++G  PN+ TF  AL + 
Sbjct: 285 DESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAA 344

Query: 330 ASLRNSHMG--YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
            S  +  +G     H  +   G+     VGTA+V MY   G I  A+     +  + + V
Sbjct: 345 CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAI-PAKNIV 403

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SWNA +  +  N +  EA+E F+ M R   A ++ +Y ++L  C     ++    IH+ +
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCE---DVSEARSIHAEV 460

Query: 448 VKSK-FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           V +  F     + + ++  + + GS E+A   F      D VSWN+ + A S       A
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           I  F  M  EG RP   T ++V+  C+  G ++ G+ + + +     +  +    S +++
Sbjct: 521 ITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMN 580

Query: 567 LLGRAGKL--EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE---FISKQILELDP 621
           ++ + G    E   +F      +     W  + AA   H   + A     I +Q   + P
Sbjct: 581 MVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRP 640

Query: 622 DDAAVYVTLSNMYAEAGLQADA 643
            D++ +V++ +  + AGL  D 
Sbjct: 641 -DSSTFVSVLSGCSHAGLVEDG 661



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 153/577 (26%), Positives = 258/577 (44%), Gaps = 30/577 (5%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           CS   P +    +  +  + +  +L  C  +  L  GR+ H  I K  +  +  +   LV
Sbjct: 7   CSWPGPRSTKDHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLV 66

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
            MY+KC  +    A    +    IA+ N L+A  +  A     F  + ++   +   N  
Sbjct: 67  QMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSSPA---AVFDLYTRMKLEERAENRP 123

Query: 220 TYSTMLAICGSLSAID---------EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              T++A+ G++++ D         + + +H             V+ ALL  Y KCG +E
Sbjct: 124 NRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVE 183

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTVALA 327
            A  VF  +   ++I W A I      G+ E+P R + L+R    +G+ PN  +F   L+
Sbjct: 184 SALEVFSRIQVPDLICWNAAIMACA--GNDERPDRALLLVRRMWLEGLLPNRASFVAILS 241

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           SC    +  +    HA+V + G  LGD  V TA+V MY   G + E+    + M    + 
Sbjct: 242 SCGDHSSLPLARSIHARVEELGF-LGDVVVATALVTMYGRCGSVDESIAVFEAMAVR-NH 299

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC--SLLPSLATCEQIH 444
           VSWNA IA F +      A   + +M +     ++ T+ + LKA   S    L     +H
Sbjct: 300 VSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALH 359

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             I  +  E +V VG++L+  Y   G+ + A   F  + A ++VSWN+M+ AY  NGRAR
Sbjct: 360 GWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAR 419

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           +A+ LF  M  + + P   ++LAVL  C     V + + +   +V       E +  + +
Sbjct: 420 EAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGV 476

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISKQILELDPD 622
           V +  R+G LE A+       +K +   W    AA     DL  A   F + Q     PD
Sbjct: 477 VRMFARSGSLEEAMAAFDATVVKDSVS-WNTKVAALSAREDLHGAITAFYTMQHEGFRPD 535

Query: 623 DAAVYVTLSNMYAEAG-LQADAEEQRKLMKMKEISKE 658
              + V++ ++ A+ G L+     Q++L    E+ ++
Sbjct: 536 KFTL-VSVVDVCADLGTLELGRSIQQQLSAAIEVERD 571


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 190/630 (30%), Positives = 330/630 (52%), Gaps = 24/630 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMP 179
           + VL  C+    + LG+  H  I    + GD  +   ++VNMY KCG++     V ++M 
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 121

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  + N ++A  +++  + +AF+   ++D   ++PN  T  +++  C  + +I  G+ 
Sbjct: 122 AKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRI 181

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H         S  AV+NAL+ +Y KCG +  A    EG+  R+ ISWT ++  + +HG 
Sbjct: 182 VHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 241

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ + ++  M  +G+  + +TF   L SC ++    +G   H ++ + G+ L   + TA
Sbjct: 242 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTA 301

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY   G    A++    M        WNA +A +    + +E +  F++M     A 
Sbjct: 302 LVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAP 361

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS------SLIEAYNKCGSWE 473
           D  T+ SIL AC+ L +L      HSR+++        V S      S+I  Y KCGS  
Sbjct: 362 DAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLA 421

Query: 474 DAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           DA+  F+   +  A+DVV+W++M+ AYSQ G + +A+  F  M  EG++P + +F++ ++
Sbjct: 422 DAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIA 481

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
            CSHSGLV++    F S+  ++GI P EAH++C+VDLL RAG +  A   +   P+    
Sbjct: 482 GCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHH 541

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             W  L +ACR + DL+ A  ++ ++  L    A  Y  L++++  +    D    R+ +
Sbjct: 542 STWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSL 599

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIG-------- 701
             +    +PGCSWIE+ N++Y FF+  ++      +++ +L++L  +I   G        
Sbjct: 600 VERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKK 659

Query: 702 -HTDNEKEDRVL--YHSERLAVGFGLISLP 728
            H   E+E + L  YHSE++AV FGLIS P
Sbjct: 660 VHDHGEQEKKFLLSYHSEKVAVVFGLISTP 689



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 211/410 (51%), Gaps = 6/410 (1%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY +CG +         M   ++ S + ++A YA+      A   F+++D   V+ N  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGL 279
           + ++L  C SL AI  GK +H + +    L    +  N ++ MY KCG ++ A  VFE +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             +N ++W  +I    +H  Y++   L+  M  DG+ PN+ T    + +CA +++   G 
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
           + H  V   G+   + V  A+V++Y   G++  A+  L+ + ++   +SW   +A + R+
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGI-ETRDKISWTTLLAAYARH 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              + AI    +M       D FT+ ++L++C  + +LA  E+IH R+ +S  E +  + 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           ++L++ Y KCG+ + A R F ++    DV  WN+++ AY    + ++ + +F +M ++G+
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            P   TFL++L AC+    +  G+     M+ E G+   +A  S   DLL
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRML-ERGLFDRQAVAS--ADLL 406



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY +CG +  A   F+ +V RNV+SW+A+I  + Q G     L L   M  +G+  N  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKE 379
           F   L +CASL    +G   H +++  G+ LGD   +G  IV+MY   GE+  A++  + 
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGL-LGDDVILGNTIVNMYGKCGEVDLAREVFER 119

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M ++ ++V+WN  IA   R+ + +EA     +M  +    ++ T  S++ AC+ + S++ 
Sbjct: 120 M-EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISR 178

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
              +H  +     ES+  V ++L+  Y KCG    A      +   D +SW +++ AY++
Sbjct: 179 GRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYAR 238

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G  ++AI + ++M  EG++  + TF+ +L +C     +  G+++ + +  E GI  +  
Sbjct: 239 HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLA-ESGIELDPV 297

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
             + +VD+ G+ G  + A      +       +W  L AA
Sbjct: 298 LQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAA 337



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 166/326 (50%), Gaps = 9/326 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K  ++ V+  C+  + +  GR  H ++    +  D  V  +LVN+Y KCG +++    +
Sbjct: 159 NKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHAL 218

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D  S   LLA YA++    +A +   ++D   V+ + +T+  +L  C +++A+ 
Sbjct: 219 EGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALA 278

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGF 294
            G+++H +  +        +  AL+ MY KCG  + A   F+ +   R+V  W A++  +
Sbjct: 279 LGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAY 338

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM---- 350
                 ++ L +   M   G+ P+  TF   L +CASL    +G + H+++++RG+    
Sbjct: 339 VLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQ 398

Query: 351 --ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS--VSWNAQIAGFFRNQKTEEAI 406
             A  D + T++++MY+  G + +AK +  +  ++ +S  V+W+A +A + +   +EEA+
Sbjct: 399 AVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEAL 458

Query: 407 EAFSQMVRNDAACDEFTYSSILKACS 432
             F  M +     D  ++ S +  CS
Sbjct: 459 RCFYSMQQEGVKPDSVSFVSAIAGCS 484



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 21/291 (7%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD    + +L  C     L LG   H  + ++ +  D  +  +LV+MY KCG+  +    
Sbjct: 259 LDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRA 318

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             +M  + D+   N LLA Y       +    F ++    V P+  T+ ++L  C SL+A
Sbjct: 319 FDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAA 378

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNA------LLTMYIKCGMMEDAESVFEGLVQ---RNV 284
           +  G+  H++ ++     + AV++A      ++ MY KCG + DA++ F    +    +V
Sbjct: 379 LGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDV 438

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W+A++  + Q G  E+ LR    M+++G+ P+  +F  A+A C     SH G +  A 
Sbjct: 439 VAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGC-----SHSGLVREAV 493

Query: 345 VI------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                     G+A  +     +VD+ S  G I EA+  ++     A   +W
Sbjct: 494 AFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTW 544



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 3/145 (2%)

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
           YN+CGS   A R F  +   +VVSW++MI AY+Q G    A+ LF +M  EG++    TF
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNL 584
           ++VL AC+  G +  G+ + E +V + G+L ++    + +V++ G+ G++++A      +
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVAD-GLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMA 609
             K T   W  + AAC  H   K A
Sbjct: 121 EAKNTVT-WNTMIAACSRHDRYKEA 144


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 208/672 (30%), Positives = 344/672 (51%), Gaps = 98/672 (14%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLK 208
           D     ++++ Y+  G+IK    +    P    D  S N ++  ++ +     A   F++
Sbjct: 61  DIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAI-DEG---KQLHAQTMKLQYLSKTAVSNALLTMYI 264
           +  +   P+ +T+S++L   G+LS I DE    +QLH +  K   LS  +V NAL++ Y+
Sbjct: 121 MKRLGFVPDPFTFSSVL---GALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYV 177

Query: 265 KCG---------MMEDAESVF---------------------------------EGLVQR 282
            C          +M  A  +F                                 EG+   
Sbjct: 178 SCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDH 237

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
             ++W A+I+G+   G YE+   L+  M   GI  +EYT+T  +++ ++    ++G   H
Sbjct: 238 IAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVH 297

Query: 343 AQVIKRGM-ALGDFV---GTAIVDMYSGLGEIWEAKKQLKEMG----------------- 381
           A V++  +   G FV     A++ +Y+  G++ EA++   +M                  
Sbjct: 298 AYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNA 357

Query: 382 ---KSASSV----------SWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSI 427
              + A+S+          +W   I+G  +N   EE ++ F+QM +     CD + Y+  
Sbjct: 358 RRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCD-YAYAGA 416

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           + +CS+L SL   +Q+HS+I++   +S++ VG++LI  Y++CG  E A+ VF  +   D 
Sbjct: 417 IASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDS 476

Query: 488 VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           VSWN+MI A +Q+G   +AI L+EKM+ E I P   TFL +LSACSH+GLV++G+  F++
Sbjct: 477 VSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDT 536

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           M   YGI PEE HYS ++DLL RAG    A     ++P +P APIW  L A C  H +++
Sbjct: 537 MRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNME 596

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           +    + ++LEL P     Y++LSNMYA  G   +    RKLM+ + + KEPGCSWIEV 
Sbjct: 597 LGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVE 656

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSE 716
           N ++ F   +  H E+  VY  L+QL+ ++  +G+  +           +KE  +  HSE
Sbjct: 657 NMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSE 716

Query: 717 RLAVGFGLISLP 728
           +LAV +G++ LP
Sbjct: 717 KLAVVYGIMKLP 728



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 50/348 (14%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAV-CGDQFVTA---SLVNMYAK 164
           +SL   LD+     V+S  S      +GR+ HA + +T V     FV +   +L+ +Y +
Sbjct: 266 HSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTR 325

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAG-------------------------------Y 193
           CG +     V  +MP  D+ S N +L+G                                
Sbjct: 326 CGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLTWTVMISGL 385

Query: 194 AKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           A+N   ++    F  +KL+G+  +P  Y Y+  +A C  L ++D G+QLH+Q ++L + S
Sbjct: 386 AQNGFGEEGLKLFNQMKLEGL--EPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDS 443

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             +V NAL+TMY +CG++E A++VF  +   + +SW A+I    QHG   + ++L   M 
Sbjct: 444 SLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKML 503

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRGMALGDFVGTAIVDMYS 365
           ++ I P+  TF   L++C     SH G      + F    +  G+   +   + ++D+  
Sbjct: 504 KEDILPDRITFLTILSAC-----SHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLC 558

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             G   EAK   + M     +  W A +AG + +   E  I+A  +++
Sbjct: 559 RAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL 606



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           +H+ I+ S F+    + + LI+ Y K  +   A  +F ++   D+V+  +M+ AYS  G 
Sbjct: 18  VHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGN 77

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV--KEYGILPEEAH 560
            + A  LF    +  IR T S + A+++A SHS    DG    +  V  K  G +P+   
Sbjct: 78  IKLAHQLFNATPMS-IRDTVS-YNAMITAFSHS---HDGHAALQLFVQMKRLGFVPDPFT 132

Query: 561 YSCMVDLL 568
           +S ++  L
Sbjct: 133 FSSVLGAL 140


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 204/711 (28%), Positives = 364/711 (51%), Gaps = 41/711 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRN-----------------GYSTRNDS 90
           A QL ++ P R   S  D+I +GY+      ++R                  G  ++++ 
Sbjct: 62  ARQLLDQMPNRNSFSI-DIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNR 120

Query: 91  FPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           F D F        +    +   S  D    I +L+ C+  E  +   + HA I K     
Sbjct: 121 FGDAF-------KLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHL 173

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           +  V  +L++ Y K G + S   +  +M   D  S N ++ GYA N L ++A   F+++ 
Sbjct: 174 NHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQ 233

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            +  +P+ +T++ +++    L     G+Q+H   +K  ++    V NA L  Y K   + 
Sbjct: 234 NLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVN 293

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +   +F  + + + +S+  II  +   G  ++ + L   ++    D   + F   L+  A
Sbjct: 294 EVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAA 353

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           S  +  MG   HAQV+   MA  DF V  ++VDMY+  G+  EA +    +  S S+V W
Sbjct: 354 SSLDLQMGRQLHAQVVV-SMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLS-SRSTVPW 411

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
            A I+   +    E  ++ F +M R + + D+ T++ +LKA + L S+   +Q+HS +++
Sbjct: 412 TAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIR 471

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S F  NV+ G +L++ Y  C S +DA + F +++  +VV+WN+++ AY+QNG  +  +  
Sbjct: 472 SGF-MNVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKS 530

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           FE+M++ G +P + +FL +L+ACSH  LV++G K F  M   Y + P+  HY+ MVD L 
Sbjct: 531 FEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALC 590

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAAVYV 628
           R+G+ + A   +  +P +P   +W  +  +CR H +  +A   + Q+  +    DAA YV
Sbjct: 591 RSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYV 650

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
           T+SN++AEAG      + +K M+ + + K P  SW+E+ +K++ F + +  H +  ++  
Sbjct: 651 TMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILR 710

Query: 689 KLKQLMQQIEDIG--------HTDNEKE---DRVLYHSERLAVGFGLISLP 728
           K++ L +Q+E  G        H + +KE   D + YHSERLA+ F LI+ P
Sbjct: 711 KIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTP 761


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 173/538 (32%), Positives = 293/538 (54%), Gaps = 5/538 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           ++LG   H  I ++    D++V  +L+ MY   G ++    V   M   D+ S N +++G
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y +N   + A   F  +    V  +H T  +ML +CG L  ++ G+ +H    + +   K
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V NAL+ MY+KCG M++A  VF+ + +R+VI+WT +ING+ + GD E  L L  LM+ 
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+ PN  T    ++ C      + G   H   +++ +     + T+++ MY+    +  
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             +      K  +   W+A IAG  +N+   +A+  F +M R D   +  T +S+L A +
Sbjct: 373 CFRVFSGASKYHTG-PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL----TAADVV 488
            L  L     IH  + K+ F S++   + L+  Y+KCG+ E A ++F+ +     + DVV
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            W ++I  Y  +G    A+ +F +MV  G+ P   TF + L+ACSHSGLV++G  +F  M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           ++ Y  L    HY+C+VDLLGRAG+L+ A   I+ +P +PT+ +W  L AAC  H ++++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQL 611

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            E  + ++ EL+P++   YV L+N+YA  G   D E+ R +M+   + K+PG S IE+
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 210/469 (44%), Gaps = 9/469 (1%)

Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
           +IT   V G    T S+   YA CG I     + ++MP   + S N ++  Y +  L+  
Sbjct: 41  VITGGRVSGHILSTLSVT--YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHD 98

Query: 202 AFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           A S F+++  +G+   P+ YTY  +    G L ++  G  +H + ++  +     V NAL
Sbjct: 99  AISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNAL 158

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L MY+  G +E A  VF+ +  R+VISW  +I+G+ ++G     L +   M  + +D + 
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
            T    L  C  L++  MG   H  V ++ +     V  A+V+MY   G + EA+     
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M +    ++W   I G+  +   E A+E    M       +  T +S++  C     +  
Sbjct: 279 MERR-DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            + +H   V+ +  S++ + +SLI  Y KC   +   RVFS  +      W+++I    Q
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           N     A+ LF++M  E + P  +T  ++L A +    ++    +   + K  G +    
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLD 456

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRCHSD 605
             + +V +  + G LE A    + +  K  +    +W  L +    H D
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 204/442 (46%), Gaps = 46/442 (10%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVA 173
           LD   ++ +L  C   + LE+GR  H L+ +  + GD+  V  +LVNMY KCG +     
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL-GDKIEVKNALVNMYLKCGRMDEARF 274

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSF--FLKLDGIDVQPNHYTYSTMLAICGSL 231
           V  +M   D+ +  C++ GY ++   + A      ++ +G  V+PN  T ++++++CG  
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG--VRPNAVTIASLVSVCGDA 332

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             +++GK LH   ++ Q  S   +  +L++MY KC  ++    VF G  + +   W+AII
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G  Q+      L L   MR + ++PN  T    L + A+L +       H  + K G  
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKK---QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
                 T +V +YS  G +  A K    ++E  KS   V W A I+G+  +     A++ 
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +MVR+    +E T++S L ACS           HS +V    E  + +   ++E Y  
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACS-----------HSGLV----EEGLTLFRFMLEHYK- 556

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
                         T A    +  ++    + GR  +A  L   +  E   PT++ + A+
Sbjct: 557 --------------TLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE---PTSTVWGAL 599

Query: 529 LSACSHSGLVQDGQ----KVFE 546
           L+AC     VQ G+    K+FE
Sbjct: 600 LAACVTHENVQLGEMAANKLFE 621


>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 307/572 (53%), Gaps = 22/572 (3%)

Query: 112 ESLLDKQFVIEVL---------------SYCSREECLELGRRYHALITKTAVCGDQFVTA 156
            +++D QF++++L               S C++   L+ G + H+ I K     + ++  
Sbjct: 48  HNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFT 107

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +LV+MY KC  I     V  +M    + + N L+ GY +      A S FL++    ++P
Sbjct: 108 ALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEP 167

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
             ++ S  L  C  L   D G QLHA ++KL++ S   V   L+ MY KC  ++D+  VF
Sbjct: 168 TPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVF 227

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED---GIDPNEYTFTVALASCASLR 333
           + ++ +NV +WT++I+G+ ++   + P   + LMRE     ++PN  T+   L+S +  R
Sbjct: 228 DIMLNKNVFTWTSMISGYARN---QLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPR 284

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +       H ++I  G    +++   +V  YS      E  +++    + +  +SWNA I
Sbjct: 285 HFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVI 344

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AGF      EEA+E F QM R     D FT++SI KA  +  +L   +QIH  + K+ + 
Sbjct: 345 AGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYT 404

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N+ V + L+  Y + G+  D++ VFS +   D++SWNS++   + +G   +AI LFEKM
Sbjct: 405 LNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKM 464

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAG 572
               I+P N++FLAVL+ACSH GL+  G + F+ M     + P +  HY+ +VDL GRAG
Sbjct: 465 RRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAG 524

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
           KL  A  FI ++PI+P   I++ L +AC  H +  +A   +K++LEL P D A Y+ LSN
Sbjct: 525 KLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSN 584

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
                G   DA   R+LM  + + KEPG SW+
Sbjct: 585 ALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616


>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
 gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
          Length = 604

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 172/517 (33%), Positives = 289/517 (55%), Gaps = 8/517 (1%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L  CG    +  G++LHA+ +   +     ++N +L MY KCG MED    F G+ 
Sbjct: 36  YLDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMK 95

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RN++SW A+I+ + Q+      + +   M  DGI P+  TFT  L + A         +
Sbjct: 96  RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   ++ G      V TA+++MYS +G I  A++   E+      VSW+  IA + +  
Sbjct: 156 VHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIK-DVVSWSNMIAAYAQTG 214

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
              EA+E F +M       +  T+ +++ AC L+  +     IH RI+++  ESN  +G+
Sbjct: 215 HGTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGT 274

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L+  Y KCG   +A+++F +L   DVV W+++++AY+++G  R A+ LF  M  EG+RP
Sbjct: 275 ALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRP 334

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TF+ VL AC H G V +G+  F S+V+++ + P   H  CM+D+LGRAGKLE A  F
Sbjct: 335 NDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESF 394

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I+ +P+K  A  W     +CR + DL+  +  ++++ E  P   A Y+TL++MY +AG+ 
Sbjct: 395 IARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMP 454

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            +AE   +LM+ +   KEPG S I V  +++ F  +++ H +  ++Y  L +L  +  ++
Sbjct: 455 EEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDELHARALEL 514

Query: 701 GHTDNEKE------DRVLYHSERLAVGFGLISLPAKN 731
           G+  + +       +R L HSERLA+ FG +S+P K 
Sbjct: 515 GYVPDTRPLLLGSVERKL-HSERLALAFGAMSVPGKR 550



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 207/439 (47%), Gaps = 22/439 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C R + L  GRR HA I  T      F+   ++ MY KCG ++ +      M  
Sbjct: 37  LDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMKR 96

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            +I S N +++ YA+N     A   FL+  LDGI  QP++ T++++L            K
Sbjct: 97  RNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGI--QPSYVTFTSVLNAFAGPELHRWAK 154

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H   +++ + S   V+ ALL MY K G ++ A  VF+ L  ++V+SW+ +I  + Q G
Sbjct: 155 LVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTG 214

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   M  +GI  N  TF   + +C  +         H ++I+ G+     +GT
Sbjct: 215 HGTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLESNTVLGT 274

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+++MY   G + EAKK   ++ +    V W+A +  + R+     A++ F+ M +    
Sbjct: 275 ALLNMYGKCGGLAEAKKIFDKLAER-DVVVWSAILEAYARHGHPRVALKLFTLMQQEGVR 333

Query: 419 CDEFTYSSILKAC---SLLPSLATCEQIH--SRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            ++ T+  +L+AC     +P      + H  S +   +     H    +++   + G  E
Sbjct: 334 PNDVTFVGVLEACCHGGFVPE----GRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLE 389

Query: 474 DAERVFSQL-TAADVVSWNSMI---KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           +AE   +++    + ++W+  +   ++Y    R ++A     + V E +    + +L + 
Sbjct: 390 EAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRA----AEKVFEFLPHCRAGYLTLA 445

Query: 530 SACSHSGLVQDGQKVFESM 548
           S  + +G+ ++ + V   M
Sbjct: 446 SMYTDAGMPEEAEAVARLM 464


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 188/614 (30%), Positives = 327/614 (53%), Gaps = 13/614 (2%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           + HAL+  T + G     A L+  YA+ G I+S   V  + P   + + N ++  Y++  
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
              +A S + ++    V+P+  TY+ +L  C     +  G++   Q +   Y     V  
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           A+L +Y KCG M++A  VF+ + +R+++ WT +I G  Q+G   + + +   M +  ++ 
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +       + +C +L +S MG   H  +I++ + +   V T++VDMY+  G +  A    
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
           + M    + +SW+A I+GF +N     A++    M       D  +  S+L ACS +  L
Sbjct: 265 RRM-LYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              + +H  IV+ +   +    +++I+ Y+KCGS   A  VF Q++  D +SWN++I +Y
Sbjct: 324 KLGKSVHGYIVR-RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASY 382

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
             +G   +A+ LF +M    ++P ++TF ++LSA SHSGLV+ G+  F  MV EY I P 
Sbjct: 383 GIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPS 442

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
           E HY+CMVDLL RAG++E A   I ++  +P   IW  L + C  H    + E  +K++L
Sbjct: 443 EKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVL 502

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL+PDD  +Y  +SN +A A    +  E RK+MK   + K PG S +EV  K++ F  ++
Sbjct: 503 ELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMED 562

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL-YHSERLAVGFGLIS 726
           KSH +  ++ + L +L  +++ +G+           + E ++R+L  HSERLA+ FGL++
Sbjct: 563 KSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLN 622

Query: 727 LPAKNKFECSRTLE 740
                +   ++ L 
Sbjct: 623 TGPGTRLLITKNLR 636



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 211/491 (42%), Gaps = 59/491 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA Q+F+KSP+  G+   + +   Y     +G      S  +    +G   D  + TV  
Sbjct: 57  SARQVFDKSPQ-CGVDAWNAMIIAY---SRRGAMFEALSLYHRMASEGVRPDSSTYTV-- 110

Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
                           VL  C+R   L  G              D FV A+++N+YAKCG
Sbjct: 111 ----------------VLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCG 154

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +   + V  +M   D+     ++ G A+N    +A   + ++    V+ +      ++ 
Sbjct: 155 KMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQ 214

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C +L     G  +H   ++   +    V  +L+ MY K G +E A  VF  ++ +NVIS
Sbjct: 215 ACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVIS 274

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W+A+I+GF Q+G     L+LV  M+  G  P+  +    L +C+ +    +G   H  ++
Sbjct: 275 WSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIV 334

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           +R +       TA++DMYS  G +  A+    ++     S+SWNA IA +  +   EEA+
Sbjct: 335 RR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQI-SFRDSISWNAIIASYGIHGSGEEAL 392

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESNVHVGSSLIEA 465
             F QM   +   D  T++S+L A S           HS +V K ++  ++ V    I+ 
Sbjct: 393 SLFLQMRETNVKPDHATFASLLSAFS-----------HSGLVEKGRYWFSIMVNEYKIQP 441

Query: 466 YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
             K                     +  M+   S+ GR  +A  L E M+ E   P  + +
Sbjct: 442 SEK--------------------HYACMVDLLSRAGRVEEAQELIESMITE---PGIAIW 478

Query: 526 LAVLSACSHSG 536
           +A+LS C + G
Sbjct: 479 VALLSGCLNHG 489



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 80/140 (57%), Gaps = 1/140 (0%)

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
           T  +IH+ ++ +    + +  + LI++Y + G  E A +VF +     V +WN+MI AYS
Sbjct: 22  TIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYS 81

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           + G   +A+ L+ +M  EG+RP +ST+  VL AC+ S  ++ G++ +   V + G   + 
Sbjct: 82  RRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQ-GYGDDV 140

Query: 559 AHYSCMVDLLGRAGKLEIAL 578
              + +++L  + GK++ A+
Sbjct: 141 FVGAAVLNLYAKCGKMDEAM 160


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/554 (34%), Positives = 312/554 (56%), Gaps = 13/554 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     +LS CS E   + GR  H+++ K+   G   V  SL+ MY KCG +     V 
Sbjct: 177 DKYTFATMLSLCSLE-LFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVF 235

Query: 176 KQMP---YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
           ++       D  S N ++ G+A     + AF  F  +      P   T+ ++++ C SL 
Sbjct: 236 EEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLR 295

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A   G Q  +Q +K+ ++   AV+NA++TMY   G + + +++FEG+ +R+V+SW  +++
Sbjct: 296 A---GCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVS 352

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            F Q    E+ +     MR +GI+P+E+T+   LA+  SL+   +  M H+ + K G+  
Sbjct: 353 MFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQ---VVEMIHSLLCKSGLVK 409

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
            + V  A+V  Y   G+I  A  Q+       S +SWN+ I+GF  N    + +E FS +
Sbjct: 410 IE-VLNALVSAYCRHGKIKRAF-QIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSAL 467

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +      + ++ S +L  CS + +++  +Q+H  I++  F S V +G++L+  Y KCGS 
Sbjct: 468 LSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSL 527

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSA 531
           + A RVF  +   D ++WN++I AY+Q+GR  +A+  FE M    GI+P  +TF +VLSA
Sbjct: 528 DKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSA 587

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CSH+GLV DG ++F++MVK YG +P   H+SC+VDLLGR+G L+ A   I +      + 
Sbjct: 588 CSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSN 647

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           I   LF+AC  H +L +   +++ ILE D ++ +VYV LSN+ A AG   +A   R++M+
Sbjct: 648 ICWSLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMR 707

Query: 652 MKEISKEPGCSWIE 665
                K+PGCSWI 
Sbjct: 708 EFGTIKQPGCSWIR 721



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 249/500 (49%), Gaps = 16/500 (3%)

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
           C D +   +L++  AK   ++  + V   +P   IA  N ++ G A+    D AF  F  
Sbjct: 109 CPDAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRD 168

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           ++ + V+ + YT++TML++C SL   D G+ +H+  +K  +L  T+V N+L+TMY KCG 
Sbjct: 169 MNKMGVKADKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGC 227

Query: 269 MEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           + DA  VFE   +   R+ +S+ A+I+GF      E    +   M++   DP E TF   
Sbjct: 228 VVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSV 287

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           ++SC+SLR    G    +Q IK G      V  A++ MYSG GE+ E +   + M +   
Sbjct: 288 MSSCSSLR---AGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGM-EERD 343

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            VSWN  ++ F +    EEA+ ++ +M R     DEFTY S+L A     SL   E IHS
Sbjct: 344 VVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATD---SLQVVEMIHS 400

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            + KS     + V ++L+ AY + G  + A ++FS +    ++SWNS+I  +  NG   +
Sbjct: 401 LLCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQ 459

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
            +  F  ++   ++P   +   VLS CS    +  G++V   +++ +G   E +  + +V
Sbjct: 460 GLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILR-HGFSSEVSLGNALV 518

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDD 623
            +  + G L+ AL     +  + T   W  + +A   H   + A   F + Q       D
Sbjct: 519 TMYAKCGSLDKALRVFDAMVERDTIT-WNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPD 577

Query: 624 AAVYVTLSNMYAEAGLQADA 643
            A + ++ +  + AGL  D 
Sbjct: 578 QATFTSVLSACSHAGLVDDG 597



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 198/435 (45%), Gaps = 44/435 (10%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +LA  A++    Q+   F+        P+HY  ST +    +      G QLHA  ++
Sbjct: 15  NHMLAALARSNQHTQSLKLFVHAHS-SFTPDHYILSTAITAAANARRAAFGAQLHALAVR 73

Query: 247 LQYLSKTAVSNALLTMYIK-----------------------------CGMMEDAE---S 274
               + + V+N+LL++Y K                             C  ++  E    
Sbjct: 74  TGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALK 133

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+G+ + ++  W A+I G  + G+ +    L   M + G+  ++YTF   L+ C SL  
Sbjct: 134 VFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLC-SLEL 192

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM--GKSASSVSWNAQ 392
              G   H+ VIK G      V  +++ MY   G + +A +  +E   G S   VS+NA 
Sbjct: 193 FDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAM 252

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I GF   +++E+A   F  M +      E T+ S++ +CS L   A C Q  S+ +K  F
Sbjct: 253 IDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLR--AGC-QAQSQAIKMGF 309

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
              V V ++++  Y+  G   + + +F  +   DVVSWN M+  + Q     +A++ + K
Sbjct: 310 VGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLK 369

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M  EGI P   T+ ++L+A     +V+    +  S++ + G++  E   + +V    R G
Sbjct: 370 MRREGIEPDEFTYGSLLAATDSLQVVE----MIHSLLCKSGLVKIEV-LNALVSAYCRHG 424

Query: 573 KLEIALIFISNLPIK 587
           K++ A    S +P K
Sbjct: 425 KIKRAFQIFSGVPYK 439


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/627 (32%), Positives = 323/627 (51%), Gaps = 78/627 (12%)

Query: 132 CLELGRR--YHALITKTAVCGDQFVTA----------------SLVNMYAKCGDIKSMVA 173
           CL L RR     L+T + V   ++V++                 L+  Y +CGDI S V 
Sbjct: 3   CLRLLRRKKRSPLLTSSFVTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVR 62

Query: 174 VVKQMPYLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
           V + M      + N +LA +AK    F+ A   F K+     QPN  +Y+ MLA      
Sbjct: 63  VFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP----QPNTVSYNIMLACHWHHL 118

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            + + +     +M L+     A  N +++   + G+M +A  +F  + ++N +SW+A+++
Sbjct: 119 GVHDARGFF-DSMPLK---DVASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVS 174

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+   GD +                       A   C           F+A  ++  +  
Sbjct: 175 GYVACGDLD-----------------------AAVEC-----------FYAAPMRSVITW 200

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
                TA++  Y   G +  A++  +EM    + V+WNA IAG+  N + E+ +  F  M
Sbjct: 201 -----TAMITGYMKFGRVELAERLFQEMSMR-TLVTWNAMIAGYVENGRAEDGLRLFRTM 254

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +      +  + +S+L  CS L +L   +Q+H  + K    S+   G+SL+  Y+KCG  
Sbjct: 255 LETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDL 314

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           +DA  +F Q+   DVV WN+MI  Y+Q+G  +KA+ LF++M  EG++P   TF+AVL AC
Sbjct: 315 KDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLAC 374

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           +H+GLV  G + F +M +++GI  +  HY+CMVDLLGRAGKL  A+  I ++P KP   I
Sbjct: 375 NHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAI 434

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           +  L  ACR H +L +AEF +K +LELDP  A  YV L+N+YA           R+ MK 
Sbjct: 435 YGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKD 494

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
             + K PG SWIE+ + ++ F S ++ H E+  ++EKLK L ++++  G+          
Sbjct: 495 NNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHD 554

Query: 704 --DNEKEDRVLYHSERLAVGFGLISLP 728
             +  KE  +L+HSE+LA+ FGL+ +P
Sbjct: 555 VGEELKEQLLLWHSEKLAIAFGLLKVP 581



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L+LG++ H L+ K  +  D     SLV+MY+KCGD+K    +  Q+P  D
Sbjct: 269 VLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKD 328

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N +++GYA++    +A   F ++    ++P+  T+  +L  C     +D G Q + 
Sbjct: 329 VVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQ-YF 387

Query: 243 QTMKLQY 249
            TM+  +
Sbjct: 388 NTMRRDF 394


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/621 (31%), Positives = 326/621 (52%), Gaps = 15/621 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C+ ++ L   +  H  I K+      F    L++ Y KC  I     +  +MP   
Sbjct: 7   LIAQCTNKKSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPNRH 65

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I + N +++ +       +A   +  +    V P+ YT+S +      +    EG++ H 
Sbjct: 66  IVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHG 125

Query: 243 QTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             + L + +S   V+  ++ MY K G M+DA  VF+ ++ ++V+ +TA+I G+ QHG   
Sbjct: 126 LAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDG 185

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L +   M    I PNEYT    L SC +L +   G + H  V+K G+       T+++
Sbjct: 186 EALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLL 245

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MYS    + ++ K    +   AS V+W + I G  +N + E A+  F +M+R   + + 
Sbjct: 246 TMYSKCNMVEDSIKVFNSLA-YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNH 304

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT SSIL ACS L  L   EQIH+  VK   + N  V ++LI  Y KCG+ E A  VF  
Sbjct: 305 FTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDS 364

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           LT  D+VS N+MI AY+QNG   +A+ LFE++   G+ P   TF+++L AC+++GLV++G
Sbjct: 365 LTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEG 424

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            ++F  +   + I     HY+CM+DLLGRA + E A + I      P    WR L  AC+
Sbjct: 425 CQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNACK 483

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +++MAE   K++L+  P D   ++ L+N+YA AG   +  E +   +   + K P  
Sbjct: 484 IHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAM 543

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRV-- 711
           SW+++  +++ F + + SH    ++ E L +L++++  +G+         D E+E ++  
Sbjct: 544 SWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISA 603

Query: 712 -LYHSERLAVGFGLISLPAKN 731
             YHSE+LA+ F L     KN
Sbjct: 604 LYYHSEKLAIAFALWKTCGKN 624



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y+S++  C+   SL T + +H+ I+KS    +   G  LI+ Y KC    +A ++F ++ 
Sbjct: 4   YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
              +V+WNSMI ++   G+ ++AI L+  M+ EG+ P   TF A+  A S  G+ ++GQK
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122


>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 306/572 (53%), Gaps = 22/572 (3%)

Query: 112 ESLLDKQFVIEVL---------------SYCSREECLELGRRYHALITKTAVCGDQFVTA 156
            +++D QF++++L               S C++   L+ G + H+ I K     + ++  
Sbjct: 48  HNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFT 107

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +LV+MY KC  I     V  +M    + + N L+ GY +      A S FL++    ++P
Sbjct: 108 ALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEP 167

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
             ++ S  L  C  L   D G QLHA ++KL++ S   V   L+ MY KC  ++D+  VF
Sbjct: 168 TPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVF 227

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED---GIDPNEYTFTVALASCASLR 333
           + ++ +NV +WT++I+G+ ++   + P   + LMRE     + PN  T+   L+S +  R
Sbjct: 228 DIMLNKNVFTWTSMISGYARN---QLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPR 284

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +       H ++I  G    +++   +V  YS      E  +++    + +  +SWNA I
Sbjct: 285 HFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVI 344

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AGF      EEA+E F QM R     D FT++SI KA  +  +L   +QIH  + K+ + 
Sbjct: 345 AGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYT 404

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N+ V + L+  Y + G+  D++ VFS +   D++SWNS++   + +G   +AI LFEKM
Sbjct: 405 LNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKM 464

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAG 572
               I+P N++FLAVL+ACSH GL+  G + F+ M     + P +  HY+ +VDL GRAG
Sbjct: 465 RRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAG 524

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
           KL  A  FI ++PI+P   I++ L +AC  H +  +A   +K++LEL P D A Y+ LSN
Sbjct: 525 KLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSN 584

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWI 664
                G   DA   R+LM  + + KEPG SW+
Sbjct: 585 ALGRDGYWDDAASIRRLMSNRGVKKEPGFSWM 616


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 192/603 (31%), Positives = 316/603 (52%), Gaps = 18/603 (2%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  HAL   +    D FV ++L  +Y           V   +P  D    N LLAG + +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 197 ALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               +A   F+++ G   V+P+  T +++L     ++    G+ +HA   K        V
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
              L+++Y KCG ME A  +F+ +   +++++ A+I+G+  +G     + L   +   G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+  T    +   +   +  +    HA V+K G+     V TA+  +Y    ++  A++
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M +     SWNA I+G+ +N  TE A+  F QM   +   +  T SS L AC+ L 
Sbjct: 379 AFDAMPEKTME-SWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L+  + +H  I   K E NV+V ++LI+ Y KCGS  +A  +F  +   +VVSWN MI 
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y  +G+  +A+ L++ M+   + PT+STFL+VL ACSH GLV++G  VF SM  +YGI 
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP-IWRPLFAACRCHSDLKMAEFISK 614
           P   H +CMVDLLGRAG+L+ A   IS  P     P IW  L  AC  H D  +A+  S+
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQ 617

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ EL+P++   YV LSN+Y      ++A   R+  K +++ K PGC+ IE+ ++ + F 
Sbjct: 618 KLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFM 677

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
           + +++H +   +Y  L++L  ++ + G+            + EKE  V  HSE+LA+ FG
Sbjct: 678 AGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFG 737

Query: 724 LIS 726
           L++
Sbjct: 738 LLN 740



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 1/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  VL   +      +GR  HA   K  +   + V   L+++YAKCGD++    + 
Sbjct: 220 DSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLF 279

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   D+ + N L++GY+ N +   +   F +L G+ ++P+  T   ++ +        
Sbjct: 280 DRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEP 339

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
               LHA  +K    +   VS AL T+Y +   M+ A   F+ + ++ + SW A+I+G+ 
Sbjct: 340 LAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYA 399

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  E  + L   M+   + PN  T + AL++CA L    +G   H  +    + L  +
Sbjct: 400 QNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVY 459

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++DMY   G I EA+     M  + + VSWN  I+G+  + +  EA++ +  M+  
Sbjct: 460 VMTALIDMYVKCGSIAEARCIFDSM-DNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDA 518

Query: 416 DAACDEFTYSSILKACS 432
                  T+ S+L ACS
Sbjct: 519 HLHPTSSTFLSVLYACS 535



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +   LS C++   L LG+  H +I    +  + +V  +L++MY KCG I     +   M 
Sbjct: 426 ISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMD 485

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N +++GY  +    +A   +  +    + P   T+ ++L  C     + EG  
Sbjct: 486 NKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTT 545

Query: 240 L 240
           +
Sbjct: 546 V 546



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 422 FTYSSILKACSL----LPSLATC--EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           F  +S+  +CS      PS A+     +H+  V S F ++  V S+L + Y       DA
Sbjct: 118 FAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDA 177

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSH 534
            +VF  + + D V WN+++   S +    +A+  F +M   G +RP ++T  +VL A + 
Sbjct: 178 RKVFDAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAE 233

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
                 G+ V  +  ++ G+   E   + ++ L  + G +E A
Sbjct: 234 VANTTMGRCV-HAFGEKCGLAQHEHVVTGLISLYAKCGDMECA 275


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/603 (32%), Positives = 310/603 (51%), Gaps = 16/603 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
            R  H L        D FV ++L  +Y K         V   +P  D    N LLAG   
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           +   +   +F   +D   V+P+  T ++ L      S +  G+ +H   +K        V
Sbjct: 193 SEALE---AFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHV 249

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
              L+++Y KCG M+ A+ +F+ +   +++++ A+I+G+  +G  E  + L   +   G 
Sbjct: 250 VTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGW 309

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PN  T    +   +   +  +    HA V+K  +     V TA+  +Y  L ++  A+ 
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               M +     SWNA I+G+ +N  TE A+  F  M   +   +  T SS L AC+ L 
Sbjct: 370 IFDAMLEKTME-SWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLG 428

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           +L+  + +H  I K K E NV+V ++LI+ Y KCGS  +A  +F ++   +VVSWN+MI 
Sbjct: 429 ALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMIS 488

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y  +G+  +A+ L++ M+   I PT+STFL+V+ ACSH GLV +GQKVF  M  EY I 
Sbjct: 489 GYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRIT 548

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP-IWRPLFAACRCHSDLKMAEFISK 614
           P   H +CMVDLLGRAGKL  AL  IS  P     P +W  L  AC  H +  +A+  S+
Sbjct: 549 PGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQ 608

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++ ELD ++A  YV LSN+Y      ++A   R+  K +++ K PGC+ IE+ ++ + F 
Sbjct: 609 KLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFM 668

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
           + +  H +   +Y  L++L  ++ + G+            + EKE  V  HSE+LA+ FG
Sbjct: 669 AGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFG 728

Query: 724 LIS 726
           L+S
Sbjct: 729 LLS 731



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+    L LG+  H +I+K  +  + +V  +L++MYAKCG I    ++  +M   ++
Sbjct: 421 LSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNV 480

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            S N +++GY  +    +A   +  +    + P   T+ +++  C     +DEG+++
Sbjct: 481 VSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV 537


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/583 (31%), Positives = 309/583 (53%), Gaps = 2/583 (0%)

Query: 118 QFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           QF+I V L  C+    +  G   H    K+ +    FV+++L++MY K G I+    V +
Sbjct: 124 QFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFE 183

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +M   ++ S   ++AG        +   +F ++    V  + +T++  L      S +  
Sbjct: 184 KMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHH 243

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H QT+K  +   + V N L TMY KCG  +    +FE +   +V+SWT +I+ + Q
Sbjct: 244 GKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQ 303

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G+ E  +     MR+  + PN+YTF   ++SCA+L  +  G   H  V++ G+     V
Sbjct: 304 MGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSV 363

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
             +I+ +YS  G +  A      + +    +SW+  I+ + +    +EA +  S M R  
Sbjct: 364 ANSIITLYSKCGLLKSASLVFHGITRK-DIISWSTIISVYSQGGYAKEAFDYLSWMRREG 422

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +EF  SS+L  C  +  L   +Q+H+ ++    +    V S++I  Y+KCGS ++A 
Sbjct: 423 PKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEAS 482

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           ++F+ +   D++SW +MI  Y+++G +++AI LFEK+   G++P    F+ VL+AC+H+G
Sbjct: 483 KIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAG 542

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           +V  G   F  M   Y I P + HY C++DLL RAG+L  A   I ++P      +W  L
Sbjct: 543 MVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTL 602

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             ACR H D+    + ++Q+L+LDP+ A  ++TL+N+YA  G   +A   RKLMK K + 
Sbjct: 603 LRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVI 662

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           KE G SW+ V +++  F + +++H +   +   LK L   I D
Sbjct: 663 KERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANIGD 705



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 205/414 (49%), Gaps = 9/414 (2%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP----NHYTYSTMLAICGSLS 232
           +M + D  S   L+AGY   +   +A   F     + V P    + +  S  L  C    
Sbjct: 82  KMTHRDEISWTTLIAGYVNASDSYEALILF---SNMWVHPGPQRDQFMISVALKACALGV 138

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            I  G+ LH  ++K   +    VS+AL+ MY+K G +E    VFE ++ RNV+SWTAII 
Sbjct: 139 NICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIA 198

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G    G   + L     M    +  + +TF +AL + A     H G   H Q IK+G   
Sbjct: 199 GLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 258

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FV   +  MY+  G+  +   +L E  +    VSW   I+ + +  + E A+EAF +M
Sbjct: 259 SSFVINTLATMYNKCGKP-DYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRM 317

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            ++  + +++T+++++ +C+ L +    EQIH  +++    + + V +S+I  Y+KCG  
Sbjct: 318 RKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLL 377

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           + A  VF  +T  D++SW+++I  YSQ G A++A      M  EG +P      +VLS C
Sbjct: 378 KSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVC 437

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
               L++ G++V   ++   GI  E   +S ++ +  + G ++ A    + + I
Sbjct: 438 GSMALLEQGKQVHAHLLC-IGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKI 490


>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
 gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
          Length = 598

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 179/501 (35%), Positives = 272/501 (54%), Gaps = 7/501 (1%)

Query: 201 QAFSFFLKLDGIDV--QPNHYTYSTMLAICGSLSA-IDEGKQLHAQTMKLQYLSKTAVSN 257
           +AF+  L   G     +P+ YT    L  C  L   + EG Q HA   K  +L +  V N
Sbjct: 98  RAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVPVQN 157

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
           AL+T Y  CG   DA  VF+ + +R+V+SWTA+++ F + G + + L +   + E  + P
Sbjct: 158 ALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGV---LAEMDVTP 214

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           NE T    L +C +L  +  G   H    +R   L   VG A++DMY    E  +  +++
Sbjct: 215 NEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKC-EKLDLARRV 273

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
            +M  +   VSW   I+G  + ++  EA+E F+ M  +    D+   S++L AC+ L +L
Sbjct: 274 FDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGAL 333

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
            +   +H  I +   E +VHVG+S+++ Y KCG  + A  +F ++   +V SWN++I  +
Sbjct: 334 ESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGF 393

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           + +GR R+A+  F++MV  G+ P   TF+ VL AC HSGLVQ+G+++FE M K Y + P 
Sbjct: 394 ALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPW 453

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
           E HY CMVDLLGRAG ++ A   I  +P++P    W  L +AC+ H  +  ++ I   I 
Sbjct: 454 EDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIH 513

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           EL+     +YV LSNMYA +   AD  + R  M  K + KEPG S IEV  K   F    
Sbjct: 514 ELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCEFLVGQ 573

Query: 678 KSHSEMPKVYEKLKQLMQQIE 698
           ++H  M  V   L  LM+QI 
Sbjct: 574 QNHLYMDDVRAMLSILMKQIH 594



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 192/426 (45%), Gaps = 44/426 (10%)

Query: 124 LSYCSR-EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           L  C+R    L  G + HA+  K    G   V  +LV  Y  CG       V  +M   D
Sbjct: 124 LKACARLGGGLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERD 183

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   LL+ + +  +F +A     ++   DV PN  T +++L  CG+L     GK +H 
Sbjct: 184 VVSWTALLSAFTRGGMFMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHG 240

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              + +      V NALL MY+KC  ++ A  VF+ L+ R+++SWT +I+G  Q     +
Sbjct: 241 WYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSE 300

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +   M+  G+ P++   +  L++CASL     G   H  + ++G+     VGT++VD
Sbjct: 301 ALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVD 360

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G +  A    +EM     S SWNA I GF  + +  EA++ F +MV +    +E 
Sbjct: 361 MYVKCGCLDTAVSIFQEMPLKNVS-SWNALINGFALHGRGREALDCFDRMVASGLHPNEV 419

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN---KCGSWEDAERVF 479
           T+ ++L AC            HS +V+         G  L E      K   WED     
Sbjct: 420 TFITVLGACC-----------HSGLVQE--------GRQLFELMTKSYKLSPWED----- 455

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
                     +  M+    + G  ++A  + + M    +RP   T++ +LSAC   G + 
Sbjct: 456 ---------HYGCMVDLLGRAGLIQEAYDVIKAMP---MRPGVFTWVTLLSACQAHGRMD 503

Query: 540 DGQKVF 545
             Q++ 
Sbjct: 504 FSQQIL 509



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 23/279 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C        G+  H    +     +  V  +L++MY KC  +     V   +   D
Sbjct: 222 VLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARD 281

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S   +++G  +     +A   F  +    V+P+    ST+L+ C SL A++ G+ +H 
Sbjct: 282 IVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHE 341

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +        V  +++ MY+KCG ++ A S+F+ +  +NV SW A+INGF  HG   +
Sbjct: 342 YIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGRE 401

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA--- 359
            L     M   G+ PNE TF   L +C            H+ +++ G  L + +  +   
Sbjct: 402 ALDCFDRMVASGLHPNEVTFITVLGACC-----------HSGLVQEGRQLFELMTKSYKL 450

Query: 360 ---------IVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                    +VD+    G I EA   +K M       +W
Sbjct: 451 SPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTW 489



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 2/185 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  +  VLS C+    LE GR  H  I +  +  D  V  S+V+MY KCG + + V++ 
Sbjct: 316 DKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIF 375

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++MP  +++S N L+ G+A +    +A   F ++    + PN  T+ T+L  C     + 
Sbjct: 376 QEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQ 435

Query: 236 EGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIING 293
           EG+QL     K   LS        ++ +  + G++++A  V + +  R  V +W  +++ 
Sbjct: 436 EGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSA 495

Query: 294 FKQHG 298
            + HG
Sbjct: 496 CQAHG 500


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 194/618 (31%), Positives = 337/618 (54%), Gaps = 11/618 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE G+  H+ I    +  +  +  SLV+ Y++   ++  V V+      D+     +++G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + +N    +A   FL++  + +QPN++TYS +L++C ++ ++D GKQ+H+QT+K+ +   
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359

Query: 253 TAVSNALLTMYIKCGMME-DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
           T V NAL+ MY+KC   E +A  VF  +V  NV+SWT +I G   HG  +    L+  M 
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           +  ++PN  T +  L +C+ LR+       HA +++R +     VG ++VD Y+   ++ 
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
            A   ++ M K   ++++ + +  F    K E A+   + M  +    D+ +    + A 
Sbjct: 480 YAWNVIRSM-KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           + L +L T + +H   VKS F     V +SL++ Y+KCGS EDA++VF ++   DVVSWN
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            ++   + NG    A+  FE+M ++   P + TFL +LSACS+  L   G + F+ M K 
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           Y I P+  HY  +V +LGRAG+LE A   +  + +KP A I++ L  ACR   +L + E 
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED 718

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
           ++ + L L P D A+Y+ L+++Y E+G    A++ R LM  K +SK+ G S +EV  K++
Sbjct: 719 MANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVH 778

Query: 672 RFFSQNKSHSEMPK-VYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLI-SLP- 728
            F S++ +  +    +Y +++ + ++I+  G      E+   +HS + AV +G I + P 
Sbjct: 779 SFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNEN-ASFHSAKQAVVYGFIYASPE 837

Query: 729 -----AKNKFECSRTLEY 741
                 KNK  C    E+
Sbjct: 838 APVHVVKNKILCKDCHEF 855



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 4/414 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I +LS+C       +G   H  + K  +  +  +  +L+++Y K   I +   +  +M +
Sbjct: 28  IRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + +   +++ + K+  F  A S F ++      PN +T+S+++  C  L  I  G ++
Sbjct: 87  RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K  +   + V ++L  +Y KCG  ++A  +F  L   + ISWT +I+       +
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L+    M + G+ PNE+TF V L   +S      G   H+ +I RG+ L   + T++
Sbjct: 207 REALQFYSEMVKAGVPPNEFTF-VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSL 265

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VD YS   ++ +A + L   G+    + W + ++GF RN + +EA+  F +M       +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFL-WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE-DAERVF 479
            FTYS+IL  CS + SL   +QIHS+ +K  FE +  VG++L++ Y KC + E +A RVF
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
             + + +VVSW ++I     +G  +    L  +MV   + P   T   VL ACS
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 8/347 (2%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L+ C S  +S +G   H  VIK G+     +   ++ +Y     IW A+K   EM    +
Sbjct: 31  LSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR-T 88

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
             +W   I+ F ++Q+   A+  F +M+ +    +EFT+SS++++C+ L  ++   ++H 
Sbjct: 89  VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            ++K+ FE N  VGSSL + Y+KCG +++A  +FS L  AD +SW  MI +     + R+
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+  + +MV  G+ P   TF+ +L A S  GL  +  K   S +   GI       + +V
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLV 266

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDD 623
           D   +  K+E A + + N   +    +W  + +       +   +  F+  + L L P++
Sbjct: 267 DFYSQFSKMEDA-VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIEVYNK 669
                 LS   A   L    +   + +K+  E S + G + +++Y K
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS+   +      HA + +  V G+  V  SLV+ YA    +     V++ M   D
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +   L+  + +    + A S    + G  ++ +  +    ++   +L A++ GK LH 
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K  +    +V N+L+ MY KCG +EDA+ VFE +   +V+SW  +++G   +G    
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            L     MR    +P+  TF + L++C++ R + +G  +  QV+K+
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF-QVMKK 657


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 196/648 (30%), Positives = 345/648 (53%), Gaps = 27/648 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    I  L  C   E L  G R H ++  + +  D  V+ +L+NMY KCG +     V 
Sbjct: 57  DAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 116

Query: 176 KQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +M    ++ S + +   +A +    +A   F  +  + ++       T+L+ C S + +
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAIIN 292
            +G+ +H+      + S+  V+NA++TMY +CG +E+A  VF+ + +  R+V+SW  +++
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +  +   +  ++L   M+   + P++ T+   L++C+S  +  +G + H Q++   +  
Sbjct: 237 TYVHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              VG A+V MY+  G   EA+    +M +  S +SW   I+ + R +   EA   F QM
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQM 352

Query: 413 V---RNDAA----CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +   +N ++     D   + +IL AC+ + +L   + +  +       S+  VG++++  
Sbjct: 353 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 412

Query: 466 YNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y KCG  E+A R+F  + +  DV  WN+MI  Y+Q G++ +A+ LF +M +EG+RP + +
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 472

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           F+++L ACSH+GL   G+  F SM  EY  +     H+ C+ DLLGR G+L+ A  F+  
Sbjct: 473 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 532

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           LP+KP A  W  L AACR H DLK A+ ++ ++L L+P  A  YV LSN+YAE       
Sbjct: 533 LPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAV 592

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH- 702
            + RK M  + + KE G S IE+   ++ F + + +H    ++ E+L +L  Q+++ G+ 
Sbjct: 593 AKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYV 652

Query: 703 ---------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
                     D ++++R+L+ HSERLA+  GLIS P       ++ L 
Sbjct: 653 PDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLR 700



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 219/450 (48%), Gaps = 19/450 (4%)

Query: 161 MYAKC---GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           MYA C   GD K+    ++Q    ++ S   L+A +A +    +      ++    V+P+
Sbjct: 1   MYAHCDSPGDAKAAFDALEQR---NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 57

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             T+ T L  CG   ++ +G ++H   +  +      VSNALL MY KCG +  A+ VF 
Sbjct: 58  AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 117

Query: 278 GLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
            + + RNVISW+ +      HG+  + LR    M   GI   +      L++C+S     
Sbjct: 118 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAG 395
            G M H+ +   G      V  A++ MY   G + EA+K    M ++    VSWN  ++ 
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           +  N + ++AI+ + +M       D+ TY S+L ACS    +     +H +IV  + E N
Sbjct: 238 YVHNDRGKDAIQLYQRMQLRP---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV- 514
           V VG++L+  Y KCGS  +A  VF ++    ++SW ++I AY +     +A  LF++M+ 
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354

Query: 515 ------VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
                  + ++P    F+ +L+AC+    ++ G+ V E      G+  ++A  + +V+L 
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVVNLY 413

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           G+ G++E A      +  +P   +W  + A
Sbjct: 414 GKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 215/474 (45%), Gaps = 56/474 (11%)

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY  C    DA++ F+ L QRN+ SWT ++  F   G  ++ LR +  MR+DG+ P+  T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           F  AL SC    +   G   H  V+   + +   V  A+++MY   G +  AK+   +M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           ++ + +SW+        +    EA+  F  M+       +    +IL ACS    +    
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQ 499
            IHS I  S FES + V ++++  Y +CG+ E+A +VF  +  A  DVVSWN M+  Y  
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS-----------HSGLVQD-------- 540
           N R + AI L+++M    +RP   T++++LSACS           H  +V D        
Sbjct: 241 NDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 541 ----------------GQKVFESMVKEYGILPEEAHYSCMV--DLLGRAGKLEIALIFI- 581
                            + VF+ M ++  I+      S  V   L+  A  L   ++ + 
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELE 356

Query: 582 ---SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEA 637
              S+  +KP A  +  +  AC   S L+  + +S+Q        D AV   + N+Y + 
Sbjct: 357 KNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC 416

Query: 638 GLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           G   + EE R++     +   P    ++++N +   ++Q     E  K++ +++
Sbjct: 417 G---EIEEARRI--FDAVCSRPD---VQLWNAMIAVYAQFGQSHEALKLFWRME 462


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 187/568 (32%), Positives = 312/568 (54%), Gaps = 27/568 (4%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N ++A  A++    +A   F  +  + + P   ++   +  C SL  I  GKQ H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q     Y S   VS+AL+ MY  CG +EDA  VF+ + +R+++SWT++I G+  +G+  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGN-- 157

Query: 302 KPLRLVCLMREDGIDPNE---------YTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
             L  V L ++  +D N+               +++C+ +    +    H+ VIKRG   
Sbjct: 158 -ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216

Query: 353 GDFVGTAIVDMYS--GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           G  VG  ++D Y+  G G +  A+K   ++      VS+N+ ++ + ++  + EA E F 
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275

Query: 411 QMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           ++V+N     +  T S++L A S   +L   + IH ++++   E +V VG+S+I+ Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A + F ++   +V SW +MI  Y  +G A KA+ LF  M+  G+RP   TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH+GL  +G + F +M   +G+ P   HY CMVDLLGRAG L+ A   I  + +KP 
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           + IW  L AACR H ++++AE    ++ ELD  +   Y+ LS++YA+AG   D E  R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           MK + + K PG S +E+  +++ F   ++ H +  K+YE L +L +++ + G+  N    
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 706 -------EKEDRVLYHSERLAVGFGLIS 726
                  EKE  +  HSE+LA+ FG+++
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMN 603



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 191/445 (42%), Gaps = 65/445 (14%)

Query: 46  YSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS-FPDGFID 97
           YS C       ++F++ PKR  +S + +I         +G   NG +    S F D  +D
Sbjct: 121 YSTCGKLEDARKVFDEIPKRDIVSWTSMI---------RGYDLNGNALDAVSLFKDLLVD 171

Query: 98  DGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           +   +            LD   ++ V+S CSR     L    H+ + K        V  +
Sbjct: 172 ENDDDDAM--------FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223

Query: 158 LVNMYAKCGDIKSMVA--VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDV 214
           L++ YAK G+    VA  +  Q+   D  S N +++ YA++ + ++AF  F +L     V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
             N  T ST+L       A+  GK +H Q +++       V  +++ MY KCG +E A  
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
            F+ +  +NV SWTA+I G+  HG   K L L   M + G+ PN  TF   LA+C     
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC----- 398

Query: 335 SHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           SH G   H +  +   A+ G F     ++ Y  + ++         +G+           
Sbjct: 399 SHAG--LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL---------LGR----------- 436

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           AGF +        +A+  + R     D   +SS+L AC +  ++   E   +R+ +    
Sbjct: 437 AGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD-S 487

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERV 478
           SN      L   Y   G W+D ERV
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERV 512



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 10/291 (3%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LK 208
           D FV+++L+ MY+ CG ++    V  ++P  DI S   ++ GY  N     A S F  L 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 209 LDGIDVQPNHYTYS----TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
           +D  D     +  S    ++++ C  + A    + +H+  +K  +    +V N LL  Y 
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 265 KCGM--MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
           K G   +  A  +F+ +V ++ +S+ +I++ + Q G   +   +   L++   +  N  T
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            +  L + +      +G   H QVI+ G+     VGT+I+DMY   G +  A+K    M 
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM- 348

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           K+ +  SW A IAG+  +    +A+E F  M+ +    +  T+ S+L ACS
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 181/573 (31%), Positives = 306/573 (53%), Gaps = 10/573 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H+L  +    GD +V + LV +YA+CG  ++  AV+ +M   D+ +   L++   +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA- 254
           +  F  A     ++ G  V PN +T +++LA C  L     G Q+H   +K    S++  
Sbjct: 176 SGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVL---GVQIHGYMIKAMGFSQSVY 232

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            S+ L+  Y + G  + A++VF+ L  +NV++W  ++    + G  E  L+L   M  +G
Sbjct: 233 TSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEG 292

Query: 315 I-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           +  PNE+ F++AL +C S+    +G   H+  IK G+A    V  A++ MY  +G + + 
Sbjct: 293 VVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQL 349

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +   + + +    VSW A I+ +F+N   E+AI   S+M       +++ +SS+L +C+ 
Sbjct: 350 EAMFRGI-EDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCAD 408

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L  L    Q H   +K   +     G++LI  Y+KCG    A   F  +   DV SWNS+
Sbjct: 409 LALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSL 468

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES-MVKEY 552
           I  ++Q+G     +  F +M   G  P  ST L VL+AC+H+GLV +G   F S M   Y
Sbjct: 469 IHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLY 528

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G      HY+CMVD+LGR+G+ + AL  I  +P +P   +W+ L A+CR H +L+     
Sbjct: 529 GTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLA 588

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +++++EL   D+A YV +S ++A  G   DA+  R+ M    + KE G SW+EV N+++ 
Sbjct: 589 AEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHT 648

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           F +Q+ SH + P +Y  L +L   + D  + ++
Sbjct: 649 FVAQDVSHPDSPSIYRMLWELSDAMRDTAYDED 681



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 200/415 (48%), Gaps = 12/415 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTY 221
           K G +   + +  +MP  ++ +    ++G  +N   + A   F  +   G+ +       
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +          A+  G+Q+H+  ++  ++    V + L+ +Y +CG    AE+V   +  
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            +V+++T++++   + G++      +  M   G+ PNE+T T  LA+C  L    +G   
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQI 217

Query: 342 HAQVIK-RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H  +IK  G +   +  + +VD YS  GE   AK     + +  + V+W   +    R+ 
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNL-QCKNVVTWCTMMQLHIRDG 276

Query: 401 KTEEAIEAFSQMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           + E+A++ F +M+       +EF +S  L AC    S+A   Q+HS  +K    S++ V 
Sbjct: 277 RPEDALQLFDEMISEGVVSPNEFAFSIALGACE---SIALGSQLHSLAIKHGLASHLRVS 333

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  Y + G  +  E +F  +   D+VSW + I AY QNG   KAI L  +M  +G+ 
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           P +  F +VLS+C+   L+  G++ F  +  + G   +    + ++++  + G++
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCGQI 447



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 36/358 (10%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           E + LG + H+L  K  +     V+ +L++MY + G ++ + A+ + +   DI S    +
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           + Y +N   ++A +   ++    + PN Y +S++L+ C  L+ +D+G+Q H   +KL   
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
            KT   NAL+ MY KCG +  A   F+ +  R+V SW ++I+G  QHG+ +  L+    M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             +G +PNE T    LA+C            HA ++  G+A   F  +A+  +Y      
Sbjct: 489 CSNGGEPNESTLLGVLAACN-----------HAGLVDEGVA---FFRSAMAGLY------ 528

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
                     G   +   +   +    R+ + ++A+    +M           + ++L +
Sbjct: 529 ----------GTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV---LVWKTLLAS 575

Query: 431 CSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           C L  +L T      ++V+ S  +S  +V  S I A +  G W DA+ V  ++  A V
Sbjct: 576 CRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMH--GEWRDADMVRRRMDEAGV 631



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 12/320 (3%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++NV++WT+ ++G  ++G  E    +   M E G+  N+
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 320 Y--TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +     +A  + A       G   H+  ++ G     +VG+ +V++Y+  G    A+  L
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
             M +S   V++ + ++   R+ +   A EA  QM+ +    +E T +SIL AC     L
Sbjct: 156 ARM-ESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PL 211

Query: 438 ATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
               QIH  ++K+  F  +V+  S+L++ Y++ G ++ A+ VF  L   +VV+W +M++ 
Sbjct: 212 VLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQL 271

Query: 497 YSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           + ++GR   A+ LF++M+ EG + P    F   L AC    L   G ++  S+  ++G+ 
Sbjct: 272 HIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIAL---GSQL-HSLAIKHGLA 327

Query: 556 PEEAHYSCMVDLLGRAGKLE 575
                 + ++ + GR G ++
Sbjct: 328 SHLRVSNALLSMYGRIGLVQ 347



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 5/203 (2%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA--TCEQIH 444
           V+W + ++G  RN + E A E F+ MV +  A ++F  ++ L AC+     A  T EQ+H
Sbjct: 61  VAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVH 120

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           S  V++ F  +  VGS L+E Y +CGS   AE V +++ + DVV++ S++ A  ++G   
Sbjct: 121 SLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFG 180

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            A     +M+  G+ P   T  ++L+AC    L   G ++   M+K  G        S +
Sbjct: 181 MAAEALGQMMGHGVMPNEHTVTSILAACCPLVL---GVQIHGYMIKAMGFSQSVYTSSTL 237

Query: 565 VDLLGRAGKLEIALIFISNLPIK 587
           VD   R G+ ++A     NL  K
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCK 260



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 3/182 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    L+ GR++H L  K           +L+NMY+KCG I         M + D
Sbjct: 402 VLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRD 461

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+ G+A++   D     F ++     +PN  T   +LA C     +DEG     
Sbjct: 462 VTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFR 521

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
             M   Y +     +   ++ M  + G  +DA  + E +  +  V+ W  ++   + HG+
Sbjct: 522 SAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGN 581

Query: 300 YE 301
            E
Sbjct: 582 LE 583



 Score = 39.7 bits (91), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           ++   K G   DA  +F ++   +VV+W S +   ++NGR   A  +F  MV  G+   +
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 523 --STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
                     A +  G ++ G++V  S+    G + +    SC+V+L  R G    A   
Sbjct: 96  FACNAALAACAAAGPGALRTGEQV-HSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAV 154

Query: 581 ISNLPIKPTAPIWRPLFAA-CR 601
           ++ +   P    +  L +A CR
Sbjct: 155 LARME-SPDVVAYTSLVSALCR 175


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 212/692 (30%), Positives = 340/692 (49%), Gaps = 70/692 (10%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LFN++P    ++ S L+ +GY    + G    G    +  + DG            +
Sbjct: 87  ARKLFNETPIXNSITWSSLV-SGYC---KNGCEVEGLRQFSQMWSDG---------QKPS 133

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
            Y+L S         VL  CS    L  G+  H    K  +  + FV   LV+MY+KC  
Sbjct: 134 QYTLGS---------VLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 168 IKSMVAVVKQMP-YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
           +     +   +P   +      +L GYA+N    +A   F ++    ++ NH+T+ ++L 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C S+SA   G+Q+H   +   +     V +AL+ MY KCG +  A  + + +   +V+ 
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W ++I G   HG  E+ L L   M    I  +++T+   L S AS +N  +G   H+  I
Sbjct: 305 WNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTI 364

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G      V  A+VDMY+  G +  A     ++      +SW + + G+  N   E+A+
Sbjct: 365 KTGFDACKTVSNALVDMYAKQGNLSCALDVFNKI-LDKDVISWTSLVTGYVHNGFHEKAL 423

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F  M       D+F  + +  AC+ L  +    Q+H+  +KS   S +   +SLI  Y
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG  EDA RV   +   +V+SW ++I  Y+QNG                         
Sbjct: 484 AKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG------------------------- 518

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
                     LV+ GQ  FESM K YGI P    Y+CM+DLLGRAGK+  A   ++ + +
Sbjct: 519 ----------LVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDV 568

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           +P A IW+ L +ACR H +L++ E   K +++L+P ++  YV LSNM++ AG   DA   
Sbjct: 569 EPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHI 628

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--- 703
           R+ MK   I +EPG SWIE+ ++++ F S+++SH    ++Y K+ ++M  I++ GH    
Sbjct: 629 RRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDM 688

Query: 704 -------DNEKEDRVL-YHSERLAVGFGLISL 727
                  D E ++R L YHSE+LAV FGL+++
Sbjct: 689 NFALRDMDEEAKERSLAYHSEKLAVAFGLLTV 720



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 5/345 (1%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +DE ++L  Q   + Y  K    N +++ Y   G + +A  +F      N I+W+++++G
Sbjct: 53  VDEARKLFDQ---MPYRDKYTW-NIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSG 108

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + ++G   + LR    M  DG  P++YT    L +C++L   H G M H   IK  +   
Sbjct: 109 YCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEAN 168

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
            FV T +VDMYS    + EA+     +    + V W A + G+ +N ++ +AI+ F +M 
Sbjct: 169 IFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMR 228

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 + FT+ SIL AC+ + + A   Q+H  I+ S F  NV+V S+L++ Y KCG   
Sbjct: 229 NQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLA 288

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            A  +   +   DVV WNSMI     +G   +A++LF KM    IR  + T+ +VL + +
Sbjct: 289 SARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLA 348

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
               ++ G+ V  S+  + G    +   + +VD+  + G L  AL
Sbjct: 349 SCKNLKIGESV-HSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 202/697 (28%), Positives = 347/697 (49%), Gaps = 72/697 (10%)

Query: 102 NTVPVTCYSLE--SLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           + + V+C  L   + LD   +  VL  C        G  +H LI       + F+  +LV
Sbjct: 100 SAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALV 159

Query: 160 NMYAKCGDIKSMVAV---VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI---- 212
            MY++CG ++    +   + Q    D+ S N +++ + K++    A   F K+  I    
Sbjct: 160 AMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEK 219

Query: 213 --DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             + + +  +   +L  CGSL A+ + K++H   ++        V NAL+  Y KCG+ME
Sbjct: 220 PTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLME 279

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID-------------- 316
           +A  VF  +  ++V+SW A++ G+ Q G+++    L   MR++ I               
Sbjct: 280 NAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYS 339

Query: 317 ---------------------PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL--G 353
                                PN  T    L++CASL     G   HA  +K  +     
Sbjct: 340 QRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDN 399

Query: 354 DFVG--------TAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEE 404
           DF G         A++DMYS       A+    ++  +  + V+W   I G  +   + +
Sbjct: 400 DFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSND 459

Query: 405 AIEAFSQMVRN--DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGS 460
           A++ F +M+      A + +T S IL AC+ L ++   +QIH+ +++  +++S+ + V +
Sbjct: 460 ALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVAN 519

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            LI  Y+KCG  + A  VF  ++    +SW SM+  Y  +GR  +A+ +F+KM   G  P
Sbjct: 520 CLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVP 579

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TFL VL ACSH G+V  G   F+SM  +YG+ P   HY+  +DLL R G+L+ A   
Sbjct: 580 DDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKT 639

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           + ++P++PTA +W  L +ACR HS++++AE    +++E++ ++   Y  +SN+YA AG  
Sbjct: 640 VKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW 699

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            D    R LMK   I K PGCSW++       FF  ++SH   P++Y  L+ L+ +I+ +
Sbjct: 700 KDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAM 759

Query: 701 GHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           G+            + EK + ++ HSE+LA+ +GL++
Sbjct: 760 GYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLT 796



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/480 (23%), Positives = 217/480 (45%), Gaps = 62/480 (12%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V  Y  CG     + V++++        N L+  + K    D A +   ++     + +
Sbjct: 57  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H+T   +L  CG L +   G   H       + S   + NAL+ MY +CG +E+A  +F+
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176

Query: 278 GLVQR---NVISWTAIINGFKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVA--LAS 328
            + QR   +VISW +I++   +  +    L    ++  ++ E   +      ++   L +
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C SL+        H   I+ G  L  FVG A++D Y+  G +  A K    M +    VS
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMM-EFKDVVS 295

Query: 389 WNAQIAGF------------FRNQKTE-----------------------EAIEAFSQMV 413
           WNA +AG+            F+N + E                       EA+  F QM+
Sbjct: 296 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 355

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF----------ESNVHVGSSLI 463
            + +  +  T  S+L AC+ L + +   +IH+  +K+            + ++ V ++LI
Sbjct: 356 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 415

Query: 464 EAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GIR 519
           + Y+KC S++ A  +F    L   +VV+W  MI  ++Q G +  A+ LF +M+ E  G+ 
Sbjct: 416 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 475

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCMVDLLGRAGKLEIA 577
           P   T   +L AC+H   ++ G+++   +++ +      A++  +C++++  + G ++ A
Sbjct: 476 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQ-YDSSAYFVANCLINMYSKCGDVDTA 534



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 150/316 (47%), Gaps = 9/316 (2%)

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           ++S  ++   ++  Y+ CG  + A  V E +     + W  +I    + G  +  + + C
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M   G   + +T    L +C  L +   G  FH  +   G     F+  A+V MYS  G
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 369 EIWEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQMV------RNDAACD 420
            + EA     E+ +      +SWN+ ++   ++     A++ FS+M         +   D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             +  +IL AC  L ++   +++H   +++    +V VG++LI+AY KCG  E+A +VF+
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   DVVSWN+M+  YSQ+G  + A  LF+ M  E I     T+ AV++  S  G   +
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 346

Query: 541 GQKVFESMVKEYGILP 556
              VF  M+   G LP
Sbjct: 347 ALNVFRQMIFS-GSLP 361


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 203/669 (30%), Positives = 337/669 (50%), Gaps = 55/669 (8%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQF-----VTASLVNMYAKCGDIKSMVAV 174
           ++  +  CS  + L   +  HA + +T +  D F      TAS ++ ++     +++   
Sbjct: 28  ILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLF-- 82

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSA 233
             Q+P  ++ + N L+  YA ++   Q+F  FL L D  +  PN +T+  ++     L A
Sbjct: 83  -DQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKA 141

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
              G  +H   +KL +     + N+L+  Y  CG +  AE +F+G+  ++V+SW ++I+ 
Sbjct: 142 SRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISA 201

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F Q    E  L L   M  + + PN  T    L++CA   +   G    + + ++G+ + 
Sbjct: 202 FAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVD 261

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGK--------------------------SASSV 387
             +  A++DMY+  G + +A+K   EM +                          +A  V
Sbjct: 262 LTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPV 321

Query: 388 ----SWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               +WN  I+ + +N K +EA+  F+++ +   A  DE T  S L AC+ L ++     
Sbjct: 322 KEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGW 381

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH  I +     N H+ SSL++ Y KCGS E A  VF  +   DV  W++MI     +GR
Sbjct: 382 IHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGR 441

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
            + AI LF +M    ++P + TF  VL ACSH+GLV +G+  F  M   YG++PE  HY+
Sbjct: 442 GKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYA 501

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD 622
           CMVD+LGRAG LE A+  I+ +   P+A +W  L  AC  H ++++ E  S Q+L+L+P 
Sbjct: 502 CMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPR 561

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
           +    V LSN+YA+ G      E RKLM+  E+ KEPGCS IE    ++ F   + +H  
Sbjct: 562 NHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPL 621

Query: 683 MPKVYEKLKQLMQQIEDIGHTDNE------------KEDRVLYHSERLAVGFGLISLPAK 730
              +Y KL+++  +++ +G+  N+            KE  +  HSE+LA+ FGL++L   
Sbjct: 622 SSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLVTLAPS 681

Query: 731 NKFECSRTL 739
                 + L
Sbjct: 682 QPIRVVKNL 690



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 12/202 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISR---NGYSTRNDSFPDGFIDDGCSNTV 104
           A +LF++ P+R   S + ++ +GY  + +   +R   N    +  +  +  I     N  
Sbjct: 281 AQKLFDEMPERDVFSWT-IMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGK 339

Query: 105 PVTCYSLESLL--------DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA 156
           P    ++ + L        D+  ++  LS C++   ++LG   H  I +  +  +  + +
Sbjct: 340 PKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLIS 399

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           SLV+MYAKCG ++  + V   +   D+   + ++AG   +     A   F ++    V+P
Sbjct: 400 SLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKP 459

Query: 217 NHYTYSTMLAICGSLSAIDEGK 238
           N  T++ +L  C     +DEG+
Sbjct: 460 NSVTFTNVLCACSHAGLVDEGR 481


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/702 (28%), Positives = 337/702 (48%), Gaps = 85/702 (12%)

Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
           N + + C   +S L+ +    VL  C+  +    G++ H++I   +V  D  +   LV+ 
Sbjct: 84  NAMELICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSF 143

Query: 162 YAKCGDIKSMVAVVKQMP----YL------------------------------------ 181
           YA CGD+K    V   M     YL                                    
Sbjct: 144 YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPES 203

Query: 182 -----------DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
                      D+ S N +++GY  N L ++    + ++  + +  +  T  ++L  C +
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
              +  GK +H+  +K  +  +   SN LL MY KCG ++ A  VFE + +RNV+SWT++
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ + G  +  ++L+  M ++G+  +    T  L +CA   +   G   H  +    M
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               FV  A++DMY+  G +  A      M      +SWN  I                 
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTM-VVKDIISWNTMIG---------------- 426

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
                +   D  T + +L AC+ L +L   ++IH  I+++ + S+ HV ++L++ Y KCG
Sbjct: 427 -----ELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 481

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
               A  +F  + + D+VSW  MI  Y  +G   +AI  F +M   GI P   +F+++L 
Sbjct: 482 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 541

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSHSGL++ G + F  M  ++ I P+  HY+CMVDLL R G L  A  F+  LPI P A
Sbjct: 542 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA 601

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            IW  L   CR + D+++AE +++++ EL+P++   YV L+N+YAEA    + +  R+ +
Sbjct: 602 TIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKI 661

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIGH------- 702
             + + K PGCSWIE+  K+  F S  N SH     +   LK++ +++++ GH       
Sbjct: 662 GKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYA 721

Query: 703 ----TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
                + +KE  +  HSE+LA+ FGL++LP +     ++ L 
Sbjct: 722 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 763



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 181/424 (42%), Gaps = 67/424 (15%)

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           +   V  + A I  F Q GD E  + L+C+ ++  ++   Y   + L  CA L++   G 
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETKTYGSVLQL--CAGLKSFTDGK 119

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM------------------- 380
             H+ +    + +   +G  +V  Y+  G++ E ++    M                   
Sbjct: 120 KVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 381 ------------------GKSASS-------------VSWNAQIAGFFRNQKTEEAIEAF 409
                             GK   S             +SWN+ I+G+  N  TE  +  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
            QM+      D  T  S+L  C+   +L+  + +HS  +KS FE  ++  ++L++ Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  + A RVF ++   +VVSW SMI  Y+++GR+  AI L ++M  EG++       ++L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI--- 586
            AC+ SG + +G+ V +  +K   +       + ++D+  + G +E A    S + +   
Sbjct: 360 HACARSGSLDNGKDVHD-YIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDI 418

Query: 587 ----------KPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYA 635
                     KP +     +  AC   S L+  + I   IL      D  V   L ++Y 
Sbjct: 419 ISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478

Query: 636 EAGL 639
           + G+
Sbjct: 479 KCGV 482


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 181/573 (31%), Positives = 306/573 (53%), Gaps = 10/573 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H+L  +    GD +V + LV +YA+CG  ++  AV+ +M   D+ +   L++   +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA- 254
           +  F  A     ++ G  V PN +T +++LA C  L     G Q+H   +K    S++  
Sbjct: 176 SGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLVL---GVQIHGYMIKAMGFSQSVY 232

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
            S+ L+  Y + G  + A++VF+ L  +NV++W  ++    + G  E  L+L   M  +G
Sbjct: 233 TSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEG 292

Query: 315 I-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           +  PNE+ F++AL +C S+    +G   H+  IK G+A    V  A++ MY  +G + + 
Sbjct: 293 VVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQL 349

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +   + + +    VSW A I+ +F+N   E+AI   S+M       +++ +SS+L +C+ 
Sbjct: 350 EAMFRGI-EDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCAD 408

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L  L    Q H   +K   +     G++LI  Y+KCG    A   F  +   DV SWNS+
Sbjct: 409 LALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSL 468

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFES-MVKEY 552
           I  ++Q+G     +  F +M   G  P  ST L VL+AC+H+GLV +G   F S M   Y
Sbjct: 469 IHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLY 528

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G      HY+CMVD+LGR+G+ + AL  I  +P +P   +W+ L A+CR H +L+     
Sbjct: 529 GTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLA 588

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           +++++EL   D+A YV +S ++A  G   DA+  R+ M    + KE G SW+EV N+++ 
Sbjct: 589 AEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHT 648

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           F +Q+ SH + P +Y  L +L   + D  + ++
Sbjct: 649 FVAQDVSHPDSPSIYRMLWELSDAMRDTAYDED 681



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 200/415 (48%), Gaps = 12/415 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTY 221
           K G +   + +  +MP  ++ +    ++G  +N   + A   F  +   G+ +       
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +          A+  G+Q+H+  ++  ++    V + L+ +Y +CG    AE+V   +  
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
            +V+++T++++   + G++      +  M   G+ PNE+T T  LA+C  L    +G   
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQI 217

Query: 342 HAQVIK-RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
           H  +IK  G +   +  + +VD YS  GE   AK     + +  + V+W   +    R+ 
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNL-QCKNVVTWCTMMQLHIRDG 276

Query: 401 KTEEAIEAFSQMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           + E+A++ F +M+       +EF +S  L AC    S+A   Q+HS  +K    S++ V 
Sbjct: 277 RPEDALQLFDEMISEGVVSPNEFAFSIALGACE---SIALGSQLHSLAIKHGLASHLRVS 333

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  Y + G  +  E +F  +   D+VSW + I AY QNG   KAI L  +M  +G+ 
Sbjct: 334 NALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLT 393

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           P +  F +VLS+C+   L+  G++ F  +  + G   +    + ++++  + G++
Sbjct: 394 PNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCGQI 447



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 168/358 (46%), Gaps = 36/358 (10%)

Query: 131 ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLL 190
           E + LG + H+L  K  +     V+ +L++MY + G ++ + A+ + +   DI S    +
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           + Y +N   ++A +   ++    + PN Y +S++L+ C  L+ +D+G+Q H   +KL   
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
            KT   NAL+ MY KCG +  A   F+ +  R+V SW ++I+G  QHG+ +  L+    M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             +G +PNE T    LA+C            HA ++  G+A   F  +A+  +Y      
Sbjct: 489 CSNGGEPNESTLLGVLAACN-----------HAGLVDEGVA---FFRSAMAGLY------ 528

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
                     G   +   +   +    R+ + ++A+    +M           + ++L +
Sbjct: 529 ----------GTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGV---LVWKTLLAS 575

Query: 431 CSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           C L  +L T      ++V+ S  +S  +V  S I A +  G W DA+ V  ++  A V
Sbjct: 576 CRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMH--GEWRDADMVRRRMDEAGV 631



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 164/320 (51%), Gaps = 12/320 (3%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++NV++WT+ ++G  ++G  E    +   M E G+  N+
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 320 Y--TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
           +     +A  + A       G   H+  ++ G     +VG+ +V++Y+  G    A+  L
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
             M +S   V++ + ++   R+ +   A EA  QM+ +    +E T +SIL AC     L
Sbjct: 156 ARM-ESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACC---PL 211

Query: 438 ATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
               QIH  ++K+  F  +V+  S+L++ Y++ G ++ A+ VF  L   +VV+W +M++ 
Sbjct: 212 VLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQL 271

Query: 497 YSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           + ++GR   A+ LF++M+ EG + P    F   L AC    L   G ++  S+  ++G+ 
Sbjct: 272 HIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIAL---GSQL-HSLAIKHGLA 327

Query: 556 PEEAHYSCMVDLLGRAGKLE 575
                 + ++ + GR G ++
Sbjct: 328 SHLRVSNALLSMYGRIGLVQ 347



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 5/203 (2%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA--TCEQIH 444
           V+W + ++G  RN + E A E F+ MV +  A ++F  ++ L AC+     A  T EQ+H
Sbjct: 61  VAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVH 120

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           S  V++ F  +  VGS L+E Y +CGS   AE V +++ + DVV++ S++ A  ++G   
Sbjct: 121 SLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFG 180

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            A     +M+  G+ P   T  ++L+AC    L   G ++   M+K  G        S +
Sbjct: 181 MAAEALGQMMGHGVMPNEHTVTSILAACCPLVL---GVQIHGYMIKAMGFSQSVYTSSTL 237

Query: 565 VDLLGRAGKLEIALIFISNLPIK 587
           VD   R G+ ++A     NL  K
Sbjct: 238 VDFYSRNGEFDMAKTVFDNLQCK 260



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 3/182 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    L+ GR++H L  K           +L+NMY+KCG I         M + D
Sbjct: 402 VLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRD 461

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+ G+A++   D     F ++     +PN  T   +LA C     +DEG     
Sbjct: 462 VTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFR 521

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
             M   Y +     +   ++ M  + G  +DA  + E +  +  V+ W  ++   + HG+
Sbjct: 522 SAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGN 581

Query: 300 YE 301
            E
Sbjct: 582 LE 583



 Score = 39.7 bits (91), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 5/142 (3%)

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           ++   K G   DA  +F ++   +VV+W S +   ++NGR   A  +F  MV  G+   +
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 523 --STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
                     A +  G ++ G++V  S+    G + +    SC+V+L  R G    A   
Sbjct: 96  FACNAALAACAAAGPGALRTGEQV-HSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAV 154

Query: 581 ISNLPIKPTAPIWRPLFAA-CR 601
           ++ +   P    +  L +A CR
Sbjct: 155 LARME-SPDVVAYTSLVSALCR 175


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/618 (32%), Positives = 317/618 (51%), Gaps = 16/618 (2%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    K+ V     V   LV MY K         V  +M   D  S N ++ GY K
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285

Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
             + +++   FL+ LD    +P+  T S++L  CG L  +   K ++   +K  ++ ++ 
Sbjct: 286 LEMVEESVRMFLENLD--QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N L+ +Y KCG M  A  VF  +  ++ +SW +II+G+ Q GD  + ++L  +M    
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
              +  T+ + ++    L +   G   H+  IK G+ +   V  A++DMY+  GE+ ++ 
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K    MG +  +V+WN  I+   R       ++  +QM +++   D  T+   L  C+ L
Sbjct: 464 KIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +    ++IH  +++  +ES + +G++LIE Y+KCG  E++ RVF +++  DVV+W  MI
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            AY   G   KA+  F  M   GI P +  F+A++ ACSHSGLV +G   FE M   Y I
Sbjct: 583 YAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P   HY+C+VDLL R+ K+  A  FI  +PIKP A IW  +  ACR   D++ AE +S+
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR 702

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           +I+EL+PDD    +  SN YA           RK +K K I+K PG SWIEV   ++ F 
Sbjct: 703 RIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFS 762

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE----------DRVLY--HSERLAVGF 722
           S + S  +   +Y+ L+ L   +   G+  + +E           R L   HSERLA+ F
Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAF 822

Query: 723 GLISLPAKNKFECSRTLE 740
           GL++       +  + L 
Sbjct: 823 GLLNTEPGTPLQVMKNLR 840



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 269/537 (50%), Gaps = 8/537 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAK 195
           RR HAL+    +    F +  L++ Y+   +  S ++V +++ P  ++   N ++  ++K
Sbjct: 24  RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N LF +A  F+ KL    V P+ YT+ +++  C  L   + G  ++ Q + + + S   V
Sbjct: 84  NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+ MY + G++  A  VF+ +  R+++SW ++I+G+  HG YE+ L +   ++   I
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ +T +  L +  +L     G   H   +K G+     V   +V MY       +A++
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              EM     SVS+N  I G+ + +  EE++  F + + +    D  T SS+L+AC  L 
Sbjct: 264 VFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLR 321

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L+  + I++ ++K+ F     V + LI+ Y KCG    A  VF+ +   D VSWNS+I 
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y Q+G   +A+ LF+ M++   +  + T+L ++S  +    ++ G+ +  + +K  GI 
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GIC 440

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
            + +  + ++D+  + G++  +L   S++    T   W  + +AC    D      ++ Q
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQ 499

Query: 616 IL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIEVYNK 669
           +   E+ PD A   VTL    + A  +   E    L++   E   + G + IE+Y+K
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 205/451 (45%), Gaps = 49/451 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C     L L +  +  + K     +  V   L+++YAKCGD+ +   V   M 
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  S N +++GY ++    +A   F  +  ++ Q +H TY  ++++   L+ +  GK 
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH+  +K       +VSNAL+ MY KCG + D+  +F  +   + ++W  +I+   + GD
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +   L++   MR+  + P+  TF V L  CASL    +G   H  +++ G      +G A
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +++MYS  G +  + +  + M +    V+W   I  +    + E+A+E F+ M ++    
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVK------SKFESNVHVGSSLIEAYNKCGSWE 473
           D   + +I+ ACS           HS +V        K +++  +   +IE Y  C    
Sbjct: 609 DSVVFIAIIYACS-----------HSGLVDEGLACFEKMKTHYKI-DPMIEHY-AC---- 651

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
                              ++   S++ +  KA    + M    I+P  S + +VL AC 
Sbjct: 652 -------------------VVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVLRACR 689

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            SG ++  ++V   +++   + P++  YS +
Sbjct: 690 TSGDMETAERVSRRIIE---LNPDDPGYSIL 717



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 161/341 (47%), Gaps = 38/341 (11%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           +E   D    + ++S  +R   L+ G+  H+   K+ +C D  V+ +L++MYAKCG++  
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
            + +   M   D  + N +++   +   F        ++   +V P+  T+   L +C S
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L+A   GK++H   ++  Y S+  + NAL+ MY KCG +E++  VFE + +R+V++WT +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I  +  +G+ EK L     M + GI P+   F   + +C+           H+ ++  G+
Sbjct: 582 IYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS-----------HSGLVDEGL 630

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAF 409
           A                       +++K   K    +   A +     R+QK  +A E  
Sbjct: 631 A---------------------CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669

Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
             M ++ DA+     ++S+L+AC     + T E++  RI++
Sbjct: 670 QAMPIKPDAS----IWASVLRACRTSGDMETAERVSRRIIE 706


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 189/630 (30%), Positives = 329/630 (52%), Gaps = 24/630 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMP 179
           + VL  C+    + LG+  H  I    + GD  +   ++VNMY KCG++     V ++M 
Sbjct: 147 VSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERME 206

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  + N ++A  +++  + +AF+   ++D   ++PN  T  +++  C  + +I  G+ 
Sbjct: 207 AKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRI 266

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H         S   V+NAL+ +Y KCG +  A    EG+  R+ ISWT ++  + +HG 
Sbjct: 267 VHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGH 326

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ + ++  M  +G+  + +TF   L SC ++    +G   H ++ + G+ L   + TA
Sbjct: 327 GKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTA 386

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY   G    A++    M        WNA +A +    + +E +  F++M     A 
Sbjct: 387 LVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAP 446

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS------SLIEAYNKCGSWE 473
           D  T+ SIL AC+ L +L      HSR+++        V S      S+I  Y KCGS  
Sbjct: 447 DAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLA 506

Query: 474 DAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           DA+  F+   +  A+DVV+W++M+ AYSQ G + +A+  F  M  EG++P + +F++ ++
Sbjct: 507 DAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIA 566

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
            CSHSGLV++    F S+  ++GI P EAH++C+VDLL RAG +  A   +   P+    
Sbjct: 567 GCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHH 626

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             W  L +ACR + DL+ A  ++ ++  L    A  Y  L++++  +    D    R+ +
Sbjct: 627 STWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSL 684

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIG-------- 701
             +    +PGCSWIE+ N++Y FF+  ++      +++ +L++L  +I   G        
Sbjct: 685 VERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKK 744

Query: 702 -HTDNEKEDRVL--YHSERLAVGFGLISLP 728
            H   E+E + L  YHSE++AV FGLIS P
Sbjct: 745 VHDHGEQEKKFLLSYHSEKVAVVFGLISTP 774



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 224/439 (51%), Gaps = 7/439 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLV-NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           L  G  +H  + + +  G   V A+ V  MY +CG +         M   ++ S + ++A
Sbjct: 57  LSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIA 116

Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
            YA+      A   F+++D   V+ N  T+ ++L  C S+ AI  GK +H + +    L 
Sbjct: 117 AYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLG 176

Query: 252 KTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
              +  N ++ MY KCG ++ A  VFE +  +N ++W  +I    +H  Y++   L+  M
Sbjct: 177 DDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM 236

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             DG+ PN+ T    + +CA +++   G + H  V   G+   + V  A+V++Y   G++
Sbjct: 237 DLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKL 296

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
             A+  L+ + ++   +SW   +A + R+   + AI    +M       D FT+ ++L++
Sbjct: 297 RAARHALEGI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLES 355

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVS 489
           C  + +LA  E+IH R+ +S  E +  + ++L++ Y KCG+ + A R F +++   DV  
Sbjct: 356 CVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTV 415

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+++ AY    + ++ + +F +M ++G+ P   TFL++L AC+    +  G+     M+
Sbjct: 416 WNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRML 475

Query: 550 KEYGILPEEAHYSCMVDLL 568
            E G+   +A  S   DLL
Sbjct: 476 -ERGLFDRQAVAS--ADLL 491



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 208/418 (49%), Gaps = 6/418 (1%)

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S N  +A YA+N    +A   F  +    V P+  +   +L    SL  + +G+  H   
Sbjct: 8   SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67

Query: 245 MKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +   L S   V+ A+LTMY +CG +  A   F+ +V RNV+SW+A+I  + Q G     
Sbjct: 68  CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDA 127

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIV 361
           L L   M  +G+  N  TF   L +CAS+R   +G   H +++  G+ LGD   +G  IV
Sbjct: 128 LELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGL-LGDDVILGNTIV 186

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MY   GE+  A++  + M ++ ++V+WN  IA   R+ + +EA     +M  +    ++
Sbjct: 187 NMYGKCGEVDLAREVFERM-EAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNK 245

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T  S++ AC+ + S+     +H  +     ES+  V ++L+  Y KCG    A      
Sbjct: 246 ITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEG 305

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   D +SW +++ AY+++G  ++AI + ++M  EG++  + TF+ +L +C     +  G
Sbjct: 306 IETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALG 365

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +++ + +  E GI  +    + +VD+ G+ G  + A      +       +W  L AA
Sbjct: 366 EEIHDRLA-ESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAA 422



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 171/340 (50%), Gaps = 5/340 (1%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +  R+  SW   I  + ++G + + L +   M  +G+ P+  +    L + ASL +   G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 339 YMFHAQVIK-RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
             FH  V +  G+     V TA++ MY+  G +  A++    M    + VSW+A IA + 
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAM-VVRNVVSWSAMIAAYA 119

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNV 456
           +     +A+E F +M       +  T+ S+L AC+ + ++A  + IH RIV       +V
Sbjct: 120 QRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDV 179

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            +G++++  Y KCG  + A  VF ++ A + V+WN+MI A S++ R ++A  L  +M ++
Sbjct: 180 ILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLD 239

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+RP   T ++V+ AC+    +  G+ V E +  E G+  +    + +V+L G+ GKL  
Sbjct: 240 GLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGE-GLESDNTVANALVNLYGKCGKLRA 298

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
           A   +  +  +     W  L AA   H   K A  + K++
Sbjct: 299 ARHALEGIETRDKIS-WTTLLAAYARHGHGKRAIAVIKRM 337



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 166/326 (50%), Gaps = 9/326 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           +K  ++ V+  C+  + +  GR  H ++    +  D  V  +LVN+Y KCG +++    +
Sbjct: 244 NKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHAL 303

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D  S   LLA YA++    +A +   ++D   V+ + +T+  +L  C +++A+ 
Sbjct: 304 EGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALA 363

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGF 294
            G+++H +  +        +  AL+ MY KCG  + A   F+ +   R+V  W A++  +
Sbjct: 364 LGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAY 423

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM---- 350
                 ++ L +   M   G+ P+  TF   L +CASL    +G + H+++++RG+    
Sbjct: 424 VLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQ 483

Query: 351 --ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS--VSWNAQIAGFFRNQKTEEAI 406
             A  D + T++++MY+  G + +AK +  +  ++ +S  V+W+A +A + +   +EEA+
Sbjct: 484 AVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEAL 543

Query: 407 EAFSQMVRNDAACDEFTYSSILKACS 432
             F  M +     D  ++ S +  CS
Sbjct: 544 RCFYSMQQEGVKPDSVSFVSAIAGCS 569



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 21/291 (7%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD    + +L  C     L LG   H  + ++ +  D  +  +LV+MY KCG+  +    
Sbjct: 344 LDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRA 403

Query: 175 VKQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
             +M  + D+   N LLA Y       +    F ++    V P+  T+ ++L  C SL+A
Sbjct: 404 FDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAA 463

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNA------LLTMYIKCGMMEDAESVFEGLVQ---RNV 284
           +  G+  H++ ++     + AV++A      ++ MY KCG + DA++ F    +    +V
Sbjct: 464 LGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDV 523

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           ++W+A++  + Q G  E+ LR    M+++G+ P+  +F  A+A C     SH G +  A 
Sbjct: 524 VAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGC-----SHSGLVREAV 578

Query: 345 VI------KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                     G+A  +     +VD+ S  G I EA+  ++     A   +W
Sbjct: 579 AFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTW 629


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 192/618 (31%), Positives = 323/618 (52%), Gaps = 16/618 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+R+  + +G+  H L  K ++  +  V  +L++MY+KCG I     + K     +
Sbjct: 295 VLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKN 354

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + S N ++ G++      + F    ++   G D++ +  T    + +C   S +   K+L
Sbjct: 355 VVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKEL 414

Query: 241 HAQTMKLQYL-SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           H  ++K +++ +   V+NA +  Y KCG +  A  VF  +  + V SW A+I G+ Q  D
Sbjct: 415 HCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSD 474

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
               L     M+  G+ P+ +T    L++C+ +++  +G   H  +I+  +    FV  +
Sbjct: 475 PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYIS 534

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ +Y   GE+  A      M +  + VSWN  + G+ +N   E A+  F QMV      
Sbjct: 535 LLSLYIHCGELSTAHVLFDAM-EDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQP 593

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            E +  S+  ACSLLPSL    + H   +K   E N  +  S+I+ Y K GS  ++ +VF
Sbjct: 594 CEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVF 653

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           + L    V SWN+M+  Y  +GRA++AI LFE+M   G  P   TFL VL+AC+HSGLV 
Sbjct: 654 NGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVH 713

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFISNLPIKPTAPIWRPLFA 598
           +G    + M   +G+ P   HY+C++D+L RAGKL+ AL I    +  +P   IW  L +
Sbjct: 714 EGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLS 773

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H +L+M E I+ ++   +P+    YV LSN+YA +G   +  + R+ MK   + K+
Sbjct: 774 SCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKD 833

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNEK 707
            GCSWIE+  K++ F +   S     ++      L ++I  +G+           ++ EK
Sbjct: 834 AGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQHDLSEEEK 893

Query: 708 EDRVLYHSERLAVGFGLI 725
            +++  HSE+LA+ +GLI
Sbjct: 894 TEQLRGHSEKLAITYGLI 911



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 241/500 (48%), Gaps = 22/500 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C+    +++G   H L+ KT +  D FV+ +LV+ Y   G +   + V K MP  +
Sbjct: 190 VVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERN 249

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL----DGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           + S N ++  ++ N L ++ F    ++    D I   P+  T +T+L +C     I  GK
Sbjct: 250 LVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGK 309

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H   MKL    +  V+NAL+ MY KCG + DA+ +F+    +NV+SW  ++ GF   G
Sbjct: 310 GVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAG 369

Query: 299 DYEKPLRLVCLMREDGID--PNEYTFTVALASC------ASLRNSHMGYMFHAQVIKRGM 350
           D  K   L+  M   G D   +E T   A+  C       +L+  H  Y    + +    
Sbjct: 370 DIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHC-YSLKQEFVHN-- 426

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
              + V  A V  Y+  G +  A +    + +S +  SWNA I G+ ++     +++A+ 
Sbjct: 427 --NELVANAFVASYAKCGSLSYAHRVFCSI-RSKTVNSWNALIGGYSQSSDPRLSLDAYF 483

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           QM  +    D FT  S+L ACS + SL   +++H  I++++ E +  V  SL+  Y  CG
Sbjct: 484 QMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCG 543

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
               A  +F  +    +VSWN+M+  Y QNG   +A+ LF +MV+ G++P   + ++V  
Sbjct: 544 ELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFG 603

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPT 589
           ACS    ++ G++     +K   +L + A  +C ++D+  + G +  +    + L  +  
Sbjct: 604 ACSLLPSLRLGREAHGYALK--CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSV 661

Query: 590 APIWRPLFAACRCHSDLKMA 609
           A  W  +      H   K A
Sbjct: 662 AS-WNAMVMGYGIHGRAKEA 680



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 217/434 (50%), Gaps = 16/434 (3%)

Query: 129 REECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           R + ++LGR+ H L++++A +  D  +   ++ MY+ CG      +V   +   ++   N
Sbjct: 93  RRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWN 152

Query: 188 CLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
            +++ Y++N L+      F+K+     + P+++T+  ++  C  +S +  G  +H   +K
Sbjct: 153 AVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVK 212

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
            + +    VSNAL++ Y   G + DA  VF+ + +RN++SW ++I  F  +G  E+   L
Sbjct: 213 TRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLL 272

Query: 307 VCLMRED----GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
           +  M E        P+  T    L  CA  R   +G   H   +K  +     V  A++D
Sbjct: 273 LGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMD 332

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR--NDAACD 420
           MYS  G I +A+   K +  + + VSWN  + GF       +  +   QM+    D   D
Sbjct: 333 MYSKCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRAD 391

Query: 421 EFTYSSILKAC---SLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAE 476
           E T  + +  C   S+LP+L   +++H   +K +F  +N  V ++ + +Y KCGS   A 
Sbjct: 392 EVTILNAVPVCFEESVLPNL---KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAH 448

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF  + +  V SWN++I  YSQ+   R ++  + +M   G+ P   T  ++LSACS   
Sbjct: 449 RVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIK 508

Query: 537 LVQDGQKVFESMVK 550
            ++ G++V   +++
Sbjct: 509 SLKLGKEVHGLIIR 522



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 134/273 (49%), Gaps = 2/273 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  +LS CS+ + L+LG+  H LI +  +  D FV  SL+++Y  CG++ +   +   M 
Sbjct: 497 VCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAME 556

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++ GY +N   ++A S F ++    VQP   +  ++   C  L ++  G++
Sbjct: 557 DKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE 616

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
            H   +K        ++ +++ MY K G + ++  VF GL +R+V SW A++ G+  HG 
Sbjct: 617 AHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGR 676

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGT 358
            ++ ++L   M+  G  P+E TF   L +C      H G  +  Q+    GM        
Sbjct: 677 AKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYA 736

Query: 359 AIVDMYSGLGEIWEAKK-QLKEMGKSASSVSWN 390
            ++DM    G++ EA K   +EM +      WN
Sbjct: 737 CVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 8/284 (2%)

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           D + T ++ MYS  G   +++     + K  +   WNA I+ + RN+     +E F +M+
Sbjct: 117 DVLCTRVITMYSMCGSPDDSRSVFDALRKK-NLFQWNAVISSYSRNELYHNVLEMFVKMI 175

Query: 414 RNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  D FT+  ++KAC+ +  +     +H  +VK++   +V V ++L+  Y   GS 
Sbjct: 176 TESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSV 235

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE----GIRPTNSTFLAV 528
            DA RVF  +   ++VSWNSMI+ +S NG + +  +L  +M+ +       P  +T   V
Sbjct: 236 SDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATV 295

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L  C+    +  G+ V   +  +  +  E    + ++D+  + G +  A + I  L    
Sbjct: 296 LPVCARDREIGVGKGV-HGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQV-IFKLNNNK 353

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
               W  +        D+     + +Q+L    D  A  VT+ N
Sbjct: 354 NVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILN 397


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/615 (31%), Positives = 328/615 (53%), Gaps = 57/615 (9%)

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP--NHYTYSTM 224
           ++++   +  QMP  D+ S N +L+GYA+N    +A   F      D  P  N  +++ M
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF------DEMPCKNSISWNGM 179

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           LA       I++ ++L       + +S     N ++  Y+K   + DA  +F+ + +R+ 
Sbjct: 180 LAAYVQNGRIEDARRLFESKADWELIS----WNCMMGGYVKRNRLVDARGIFDRMPERDE 235

Query: 285 ISWTAIINGFKQHGDY--------EKPLRLV-------------CLMRE-----DGI-DP 317
           +SW  +I+G+ Q+G+         E P+R V              ++ E     DG+ + 
Sbjct: 236 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 295

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQ 376
           N  ++   +A     +      M  A+ +   M   +      ++  Y+  G+I +A+  
Sbjct: 296 NSVSWNAIIAGYVQCKR-----MDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M +   S+SW A IAG+ ++   EEA+  F +M R+    +  T++S L  C+ + +
Sbjct: 351 FDRMPQR-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 409

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +Q+H R+VK+  ES  +VG++L+  Y KCG+ +DA  VF  +   +VVSWN+MI  
Sbjct: 410 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 469

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+++G  ++A++LFE M   GI P + T + VLSACSH+GLV  G + F SM ++YGI  
Sbjct: 470 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 529

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+CM+DLLGRAG+L+ A   + N+P +P A  W  L  A R H + ++ E  +K I
Sbjct: 530 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMI 589

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            E++PD++ +YV LSN+YA +G   D    R  M+ + + K PG SW+EV NKI+ F   
Sbjct: 590 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVG 649

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRV---LYHSERLAVGFGLI 725
           +  H E  ++Y  L++L  +++  G+         D E+E++V    YHSE+LAV FG++
Sbjct: 650 DSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL 709

Query: 726 SLPAKNKFECSRTLE 740
           ++PA       + L 
Sbjct: 710 AIPAGRPIRVIKNLR 724



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 187/386 (48%), Gaps = 21/386 (5%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+    ++++ YA+ G++     + ++ P  D+ +   +++GY +N + D+A   F   D
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF---D 290

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G+  + N  +++ ++A       +D+ ++L  + M  Q +S     N ++T Y + G + 
Sbjct: 291 GMP-EKNSVSWNAIIAGYVQCKRMDQARELF-EAMPCQNVSSW---NTMITGYAQNGDIA 345

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A + F+ + QR+ ISW AII G+ Q G  E+ L L   M+ DG   N  TFT  L++CA
Sbjct: 346 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 405

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            +    +G   H +V+K G+  G +VG A++ MY   G I +A    + + +    VSWN
Sbjct: 406 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI-EEKEVVSWN 464

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVK 449
             IAG+ R+   +EA+  F  M +     D+ T   +L ACS    +    E  +S    
Sbjct: 465 TMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQD 524

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRA----R 504
               +N    + +I+   + G  +DA+ +   +    D  +W +++ A   +G      +
Sbjct: 525 YGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 584

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLS 530
            A ++FE      + P NS    +LS
Sbjct: 585 AAKMIFE------MEPDNSGMYVLLS 604



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++      LS C+    LELG++ H  + K  +    +V  +L+ MY KCG+I     V
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + +   ++ S N ++AGYA++    +A   F  +    + P+  T   +L+ C     +
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511

Query: 235 DEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           D+G +  ++ T      + +     ++ +  + G ++DA+++ + +  + +  +W A++ 
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS--CASLRNSHMGYM 340
             + HG+ E   +   ++ E  ++P+     V L++   AS R   +G M
Sbjct: 572 ASRIHGNTELGEKAAKMIFE--MEPDNSGMYVLLSNLYAASGRWGDVGRM 619



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 54/293 (18%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N  +T +++ G  + A  +F  + +R+ ISW A+I+G   +  +    +L   M    + 
Sbjct: 53  NIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDL- 111

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKK 375
               ++ V ++ C   RN     +   Q+ +R     D V   A++  Y+  G + EAK+
Sbjct: 112 ---VSWNVMISGCVRYRNLRAARLLFDQMPER-----DVVSWNAMLSGYAQNGYVKEAKE 163

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              EM    +S+SWN  +A + +N + E+A                              
Sbjct: 164 IFDEM-PCKNSISWNGMLAAYVQNGRIEDA------------------------------ 192

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
                     R+ +SK +  +   + ++  Y K     DA  +F ++   D VSWN+MI 
Sbjct: 193 ---------RRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMIS 243

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            Y+QNG   +A  LFE+  V  +     T+ A++S    +G++ + ++VF+ M
Sbjct: 244 GYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGM 292



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/342 (18%), Positives = 142/342 (41%), Gaps = 47/342 (13%)

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           K    +   A  V WN  I    RN + + A+  F+ M R  +     ++++++  C   
Sbjct: 38  KTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSS----ISWNAMISGCLSN 93

Query: 435 PSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
                  Q+  ++      S NV     +I    +  +   A  +F Q+   DVVSWN+M
Sbjct: 94  DKFYLARQLFEKMPTRDLVSWNV-----MISGCVRYRNLRAARLLFDQMPERDVVSWNAM 148

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +  Y+QNG  ++A  +F++M  +     + ++  +L+A   +G ++D +++FES      
Sbjct: 149 LSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARRLFESKADW-- 202

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
              E   ++CM+    +  +L  A      +P +     W  + +    + +L  A+   
Sbjct: 203 ---ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS-WNTMISGYAQNGELLEAQ--- 255

Query: 614 KQILELDP-DDAAVYVTLSNMYAEAGLQADAE----------------------EQRKLM 650
            ++ E  P  D   +  + + Y + G+  +A                       + +++ 
Sbjct: 256 -RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMD 314

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           + +E+ +   C  +  +N +   ++QN   ++    ++++ Q
Sbjct: 315 QARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 356


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 190/590 (32%), Positives = 318/590 (53%), Gaps = 20/590 (3%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
           D FV ++L  +Y     +     V   +P  D    N LLAG + +    +A   F ++ 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 210 -DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
            DG  V+P+  T +++L     ++ +  G+ +H+   K        V   L+++Y KCG 
Sbjct: 204 CDG-SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +E A  +F+ + + +++++ A+I+G+  +G     + L   +   G+ PN  T    +  
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            +   +  +    H  V+K G      V TAI  ++  L ++  A+K    M +     S
Sbjct: 323 HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTME-S 381

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA I+G+ +N  TE A+  F QMV+ +   +  T SS L AC+ L +L+  + +H  I 
Sbjct: 382 WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIIT 441

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +   E NV+V ++LI+ Y KCGS  +A R+F+ +   +VVSWN+MI  Y  +G+  +A+ 
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           L++ M+   + PT++TFL+VL ACSH GLV++G KVF SM  +Y I P   H +CMVDLL
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLL 561

Query: 569 GRAGKLEIALIFISNLPIKPTAP-IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
           GRAG+L+ A   IS  P     P +W  L  AC  H D  +A+  S+++ ELDP+++  Y
Sbjct: 562 GRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYY 621

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           V LSN++      ++A   R+  K +++ K PG + IE+ NK + F + +++H +   +Y
Sbjct: 622 VLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIY 681

Query: 688 EKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
             L++L  ++ + G+            + EKE  V  HSE+LA+ FGL+S
Sbjct: 682 SYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLS 731



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 158/317 (49%), Gaps = 1/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  VL   +    + +GR  H+   K  +   + V   L+++Y+KCGD++S   + 
Sbjct: 211 DATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLF 270

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ + N L++GY+ N +   + + F +L  + + PN  T   ++ +        
Sbjct: 271 DMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDL 330

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             + LH   +K  + + + VS A+ T++ +   ME A   F+ + ++ + SW A+I+G+ 
Sbjct: 331 LAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYA 390

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G  E  + L   M +  + PN  T +  L++CA L    +G   H  + +  +    +
Sbjct: 391 QNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVY 450

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++DMY+  G I EA++    M  + + VSWNA IAG+  + +  EA++ +  M+  
Sbjct: 451 VMTALIDMYAKCGSISEARRIFNTM-DNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDA 509

Query: 416 DAACDEFTYSSILKACS 432
                  T+ S+L ACS
Sbjct: 510 HLLPTSATFLSVLYACS 526



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 181/398 (45%), Gaps = 11/398 (2%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHA  +   Y + T V++AL  +Y     ++ A  VF+ +   + + W  ++ G      
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEA 195

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E   R+VC   +  + P+  T    L + A + +  MG   H+   K G+A  + V T 
Sbjct: 196 VESFARMVC---DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ +YS  G++ E+ + L +M +    V++NA I+G+  N     ++  F++++      
Sbjct: 253 LISLYSKCGDV-ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T  +++   S        + +H  ++KS F +N  V +++   + +    E A + F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +    + SWN+MI  Y+QNG    A+ LFE+MV   +RP   T  + LSAC+  G + 
Sbjct: 372 DTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G K    ++ E  + P     + ++D+  + G +  A    + +  K     W  + A 
Sbjct: 432 LG-KWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVS-WNAMIAG 489

Query: 600 CRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYA 635
              H     A  + K +L+  L P  A     LS +YA
Sbjct: 490 YGLHGQGAEALKLYKDMLDAHLLPTSATF---LSVLYA 524



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 27/360 (7%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           L +  H  + K+    +  V+ ++  ++ +  D++S       MP   + S N +++GYA
Sbjct: 331 LAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYA 390

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +N L + A + F ++  ++V+PN  T S+ L+ C  L A+  GK LH    +        
Sbjct: 391 QNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVY 450

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V  AL+ MY KCG + +A  +F  +  +NV+SW A+I G+  HG   + L+L   M +  
Sbjct: 451 VMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAH 510

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-------GTAIVDMYSGL 367
           + P   TF   L +C     SH G +     + R M   D+         T +VD+    
Sbjct: 511 LLPTSATFLSVLYAC-----SHGGLVEEGWKVFRSMT-DDYAINPGIEHCTCMVDLLGRA 564

Query: 368 GEIWEAKKQLKEMGKSASSVS-WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
           G++ EA + + E  KSA     W A +     ++ ++ A  A  ++   D     +    
Sbjct: 565 GQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYV-- 622

Query: 427 ILKACSLLPSLATCEQIHSR--IVKSKFESNVHV---GSSLIEAYNKCGSWEDAERVFSQ 481
                 LL +L T ++ +S   +V+ + +S   V   G +LIE  NK   +   +R   Q
Sbjct: 623 ------LLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQ 676



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            LS C++   L LG+  H +IT+  +  + +V  +L++MYAKCG I     +   M   +
Sbjct: 420 TLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKN 479

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           + S N ++AGY  +    +A   +  +    + P   T+ ++L  C     ++EG
Sbjct: 480 VVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEG 534


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 205/638 (32%), Positives = 343/638 (53%), Gaps = 30/638 (4%)

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA- 163
           P   +SL+  L       + +  +  E  +L    HAL  KTA      V++ L+ +YA 
Sbjct: 4   PTLSHSLQPFLPPNLHFPLQNCGTEREANQL----HALSIKTASLNHPSVSSRLLALYAD 59

Query: 164 -KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
            +  +++   ++   +    + S N L+  Y +N   + A + F KL   D  P+ +T  
Sbjct: 60  PRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLP 118

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
            +L  C  L A+ EGKQ+H   +K+ +     V ++L++MY KCG +E    VF+ +  +
Sbjct: 119 CVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDK 178

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           +V+SW ++I+G+ + G+ E  L     M E+  + + +++T+ +        S  G +  
Sbjct: 179 DVVSWNSLIDGYARCGEIELALE----MFEEMPEKDSFSWTILIDGL-----SKSGKLEA 229

Query: 343 AQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           A+ +   M + + V   A+++ Y   G+   AK+   +M +  S V+WN+ I G+ RN++
Sbjct: 230 ARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPER-SLVTWNSMITGYERNKQ 288

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             +A++ F  M+R D + +  T    + A S + SL T   +HS IVKS F+++  +G+ 
Sbjct: 289 FTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTL 348

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LIE Y+KCGS + A RVF  +    +  W S+I     +G   + + LF++M   G++P 
Sbjct: 349 LIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPH 408

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             TF+ VL+ACSH+G  +D  + F+ M  +YGI P   HY C++D+L RAG LE A   I
Sbjct: 409 AITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTI 468

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +PIK    IW  L +  R H +++M E+ ++ +++L PD    YV LSNMYA AGL  
Sbjct: 469 ERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWE 528

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
              + R++MK K + K+PGCS IE    I+ F   +KSH +  ++Y KL ++ +++   G
Sbjct: 529 KVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAG 588

Query: 702 HT------------DNEKEDRVLYHSERLAVGFGLISL 727
           H             DNEKE  +  HSERLA+ FGL+++
Sbjct: 589 HIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNI 626


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 195/614 (31%), Positives = 328/614 (53%), Gaps = 57/614 (9%)

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP--NHYTYSTM 224
           ++++   +  QMP  D+ S N +L+GYA+N    +A   F      D  P  N  +++ M
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIF------DEMPCKNSISWNGM 98

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           LA       I++ ++L       + +S     N ++  Y+K   + DA  +F+ + +R+ 
Sbjct: 99  LAAYVQNGRIEDARRLFESKADWELIS----WNCMMGGYVKRNRLVDARGIFDRMPERDE 154

Query: 285 ISWTAIINGFKQHGDY--------EKPLRLV-------------CLMRE-----DGI-DP 317
           +SW  +I+G+ Q+G+         E P+R V              ++ E     DG+ + 
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK 214

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQ 376
           N  ++   +A     +      M  A+ +   M   +      ++  Y+  G+I +A+  
Sbjct: 215 NSVSWNAIIAGYVQCKR-----MDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 269

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M +   S+SW A IAG+ ++   EEA+  F +M R+    +  T++S L  C+ + +
Sbjct: 270 FDRMPQR-DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 328

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +Q+H R+VK+  ES  +VG++L+  Y KCG+ +DA  VF  +   +VVSWN+MI  
Sbjct: 329 LELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAG 388

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y+++G  ++A++LFE M   GI P + T + VLSACSH+GLV  G + F SM ++YGI  
Sbjct: 389 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 448

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+CM+DLLGRAG+L+ A   + N+P +P A  W  L  A R H + ++ E  +K I
Sbjct: 449 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMI 508

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            E++PD++ +YV LSN+YA +G   D    R  M+ + + K PG SW+EV NKI+ F   
Sbjct: 509 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVG 568

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRV---LYHSERLAVGFGLI 725
           +  H E  ++Y  L++L  +++  G+         D E+E++V    YHSE+LAV FG++
Sbjct: 569 DSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGIL 628

Query: 726 SLPAKNKFECSRTL 739
           ++PA       + L
Sbjct: 629 AIPAGRPIRVIKNL 642



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 187/386 (48%), Gaps = 21/386 (5%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+    ++++ YA+ G++     + ++ P  D+ +   +++GY +N + D+A   F   D
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF---D 209

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G+  + N  +++ ++A       +D+ ++L  + M  Q +S     N ++T Y + G + 
Sbjct: 210 GMP-EKNSVSWNAIIAGYVQCKRMDQARELF-EAMPCQNVSSW---NTMITGYAQNGDIA 264

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A + F+ + QR+ ISW AII G+ Q G  E+ L L   M+ DG   N  TFT  L++CA
Sbjct: 265 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 324

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            +    +G   H +V+K G+  G +VG A++ MY   G I +A    + + +    VSWN
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI-EEKEVVSWN 383

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVK 449
             IAG+ R+   +EA+  F  M +     D+ T   +L ACS    +    E  +S    
Sbjct: 384 TMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQD 443

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGRA----R 504
               +N    + +I+   + G  +DA+ +   +    D  +W +++ A   +G      +
Sbjct: 444 YGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK 503

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLS 530
            A ++FE      + P NS    +LS
Sbjct: 504 AAKMIFE------MEPDNSGMYVLLS 523



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++      LS C+    LELG++ H  + K  +    +V  +L+ MY KCG+I     V
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            + +   ++ S N ++AGYA++    +A   F  +    + P+  T   +L+ C     +
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430

Query: 235 DEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           D+G +  ++ T      + +     ++ +  + G ++DA+++ + +  + +  +W A++ 
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS--CASLRNSHMGYM 340
             + HG+ E   +   ++ E  ++P+     V L++   AS R   +G M
Sbjct: 491 ASRIHGNTELGEKAAKMIFE--MEPDNSGMYVLLSNLYAASGRWGDVGRM 538


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 310/552 (56%), Gaps = 17/552 (3%)

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE---GKQLHAQTM 245
           +++G+ KN+ F+ +   F   D +      +  +T++A+  +++ + E   G Q+    +
Sbjct: 1   MISGFVKNSCFEDSIRVFG--DMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAI 58

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           K  + S  ++   L++++ KCG +E A  +F  + ++++IS  A+I+GF  +G+ E  +R
Sbjct: 59  KCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVR 118

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   +   G   +  T    +   +   +S++    H   +K G+     V TA+  +Y 
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
            L E+  A+ QL +     +  SWNA I+G  +N  T+ AI  F  M +N+   +  T +
Sbjct: 179 RLNEMIFAR-QLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVT 237

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           SIL AC+ + +L+  E +HS I  ++FESNV+V ++LI+ Y KCGS   A  +F  +   
Sbjct: 238 SILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           + V+WN+MI  Y  +G  ++A+ LF  M+   ++PT  TFL+VL ACSH+GLV++G  +F
Sbjct: 298 NEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIF 357

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
            +MV ++G  P   HY+CMVD+LGRAG+L+ AL FI  +P++P  P+W  L  AC  H D
Sbjct: 358 HTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKD 417

Query: 606 LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIE 665
             +A   S+++ ELDP++   YV +SN+Y+       A   R++ K K ++K PGC+ IE
Sbjct: 418 TNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIE 477

Query: 666 VYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYH 714
           +    + F S ++SH +   +Y +L +L  ++ + G             + EKE  +  H
Sbjct: 478 IGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVH 537

Query: 715 SERLAVGFGLIS 726
           SE+LA+ FGLIS
Sbjct: 538 SEKLAIAFGLIS 549



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 190/422 (45%), Gaps = 42/422 (9%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
            D   VI VL   +  + L+LG +   L  K        +   L+++++KCG+++    +
Sbjct: 29  FDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLL 88

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++   D+ SCN +++G+  N   + +   F +L     + +  T   ++ +       
Sbjct: 89  FGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHS 148

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
                +H   +KL  +S ++VS AL T+Y +   M  A  +F+   ++ + SW A+I+G 
Sbjct: 149 YLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGC 208

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            Q+G  +  + L   M+++ ++PN  T T  L++CA +    +G   H+ +         
Sbjct: 209 TQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNV 268

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V TA++DMY+  G I  A ++L ++    + V+WNA I+G+  +   +EA++ F  M+ 
Sbjct: 269 YVSTALIDMYAKCGSITVA-RELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLS 327

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK---FESNVH-VGSSLIEAYNKCG 470
           +       T+ S+L ACS           H+ +VK     F + VH  G   +  +  C 
Sbjct: 328 SSVKPTGLTFLSVLYACS-----------HAGLVKEGDGIFHTMVHDFGFEPLAEHYAC- 375

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
                                 M+    + G+ +KA+   + M VE   P    + A+L 
Sbjct: 376 ----------------------MVDILGRAGQLKKALEFIKAMPVE---PGPPVWGALLG 410

Query: 531 AC 532
           AC
Sbjct: 411 AC 412



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 11/283 (3%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K  +     V+ +L  +Y +  ++     +  +     +AS N +++G  +N L 
Sbjct: 155 HGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLT 214

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           D A S F  +   +V PN  T +++L+ C  + A+  G+ +H+     ++ S   VS AL
Sbjct: 215 DAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTAL 274

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           + MY KCG +  A  +F+ + ++N ++W A+I+G+  HG  ++ L+L   M    + P  
Sbjct: 275 IDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTG 334

Query: 320 YTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            TF   L +C     SH G       +FH  V   G          +VD+    G++ +A
Sbjct: 335 LTFLSVLYAC-----SHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            + +K M        W A +     ++ T  A  A  ++   D
Sbjct: 390 LEFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELD 432


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 275/483 (56%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L+  Y+K G +E A  +F+ +  RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+EY        CA LR+   G   HA V++ G+     VG+++  MY   G + + +  
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ +  S + VS N  I+G  +N   E A+E F  M       +  T+ S + +CS L +
Sbjct: 124 LRAL-PSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 182

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH+  +K+  +  V V +SL+  Y++CG   D+ERV  + +  D+V  ++MI A
Sbjct: 183 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 242

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KA+ LF++M+  G  P   TFL +L ACSHSGL  +G   FE M K YG+ P
Sbjct: 243 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 302

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L  A   I ++P++P   IW+ L +AC+      MAE I++++
Sbjct: 303 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 362

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  + R+ M+ + + KEPG SW+E+  +I++F + 
Sbjct: 363 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 422

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SHS   ++ E L+++M +I   G+            D EKE  + +HSE+LA+ F  +
Sbjct: 423 DESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 482

Query: 726 SLP 728
           SLP
Sbjct: 483 SLP 485



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 193/399 (48%), Gaps = 10/399 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+  Y K GD+++   +  +MP  ++A+ N ++AG   + L +++  FF  +    +QP+
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            Y   ++   C  L  +  G+Q+HA  ++        V ++L  MY++CG + D E+   
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L   N++S    I+G  Q+GD E  L   CLMR  G++ N  TF  A+ SC+ L     
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  IK G+     V T++V MYS  G + ++++   E       V  +A I+ + 
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEY-SGTDLVLCSAMISAYG 244

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFES 454
            +   ++A+  F QM+   A  +E T+ ++L ACS   L      C ++ ++      + 
Sbjct: 245 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY--GLQP 302

Query: 455 NVHVGSSLIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           +V   + +++   + G   +AE  + S     D V W +++ A     +   A  + E+ 
Sbjct: 303 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER- 361

Query: 514 VVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKE 551
           V+E + P +S    +LS   + S   +D  KV E+M ++
Sbjct: 362 VIE-LDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQ 399



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 207/501 (41%), Gaps = 80/501 (15%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ HA + ++ +  D  V +SL +MY +CG ++   A ++ +P L+I SCN  ++G  +
Sbjct: 85  GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQ 144

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   + A  FF  + G  V+ N  T+ + +  C  L+A+ +G+Q+HA  +K        V
Sbjct: 145 NGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPV 204

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             +L+ MY +CG + D+E V       +++  +A+I+ +  HG  +K + L   M   G 
Sbjct: 205 MTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGA 264

Query: 316 DPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           +PNE TF   L +C  + L++  M   F       G+       T IVD+    G + EA
Sbjct: 265 EPNEVTFLTLLYACSHSGLKDEGMN-CFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 323

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +  +  M      V W                                    ++L AC  
Sbjct: 324 EDLILSMPVQPDGVIWK-----------------------------------TLLSACKT 348

Query: 434 LPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV----- 487
                  E+I  R+++    +S  +V  S I A +    WED  +V   +   +V     
Sbjct: 349 QKKFDMAERIAERVIELDPHDSASYVLLSNIRATSS--RWEDVSKVRETMREQNVRKEPG 406

Query: 488 VSWNSMIKAYSQ-------NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           VSW  +     Q       + R R+ +   E+M+   IR                G   D
Sbjct: 407 VSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTR-IR--------------QCGYAPD 451

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
              VF  M  E     +E      V L   + KL IA  F+S LP      + + L    
Sbjct: 452 MSMVFHDMEDE----EKE------VSLAHHSEKLAIAFAFLS-LPEGVPIRVMKNLRVCD 500

Query: 601 RCHSDLK-MAEFISKQILELD 620
            CH  +K M++ I ++I+  D
Sbjct: 501 DCHVAIKLMSKVIGREIVVRD 521



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  ++ CS    L  G++ HAL  KT V     V  SLV+MY++CG +     V  +   
Sbjct: 171 VSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG 230

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D+  C+ +++ Y  +    +A   F ++     +PN  T+ T+L  C      DEG   
Sbjct: 231 TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNC 290

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  LQ   K      ++ +  + G + +AE +   + VQ + + W  +++  K 
Sbjct: 291 FELMTKTYGLQPSVKH--YTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKT 348

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
              ++   R+   + E  +DP++    V L++
Sbjct: 349 QKKFDMAERIAERVIE--LDPHDSASYVLLSN 378


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 198/654 (30%), Positives = 352/654 (53%), Gaps = 28/654 (4%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
           +LF++ P+R  +S + +I +GY +    G   N +    D    G   DG         Y
Sbjct: 2   RLFDEMPQRDSVSWNTMI-SGYTSC---GKLENSWCLFTDMKRCGCYVDG---------Y 48

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           S   LL            +  +  +LG + H L+ K     + +V +SLV+MYAKC  ++
Sbjct: 49  SFSRLLKG---------IASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVE 99

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--VQPNHYTYSTMLAI 227
                  ++   +  S N L+AG+ +      AF + L L  +   V  +  T++ +L +
Sbjct: 100 DAFGAFMEILEPNSVSWNALIAGFVQVRDTKTAF-WLLGLMEMKAAVTMDDGTFAPLLTL 158

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVIS 286
                  +  KQ+HA+ +KL    +  + NA+++ Y  CG++ DA+ VF+GL   +++IS
Sbjct: 159 LDDPMFCNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLIS 218

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W ++I G  +H   E    L   M  + I+ + YT+T  +++C+   +   G   H  VI
Sbjct: 219 WNSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVI 278

Query: 347 KRGMALGDFVGTAIVDMYSGLGE-IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           K+G+     V  A++ MY      + +    L E  K    VSWN+ + GF +N  +E+A
Sbjct: 279 KKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDA 338

Query: 406 IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           ++ F  +  ++   D++ +S++L++CS L +L   +Q H+   KS FESN  V SSLI  
Sbjct: 339 VKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILM 398

Query: 466 YNKCGSWEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y+KCG  E+A + F Q+++  + ++WN+MI  Y+Q+G  + ++ LF +M  + ++  + T
Sbjct: 399 YSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVT 458

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F A+L+ACSH+GL+Q+G ++  SM   Y I P   HY+  VDLLGRAG +      I ++
Sbjct: 459 FTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESM 518

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           P+ P   + +     CR   +++MA  ++  +LE++P+D   YV+LS+MY++     +  
Sbjct: 519 PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKA 578

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
             +K+MK + + K PG SWIE+ N++  F ++++SHS   ++Y  ++ L Q+++
Sbjct: 579 NVKKMMKERGVKKVPGWSWIEIRNQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQ 632


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 178/518 (34%), Positives = 292/518 (56%), Gaps = 13/518 (2%)

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           +I +G QLH   +K        V+N L+  Y K  +  D+   FE   Q++  +W++II+
Sbjct: 30  SIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS 89

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            F Q+      L  +  M    + P+++    A  SC  L    +G   H   +K G   
Sbjct: 90  CFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDA 149

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FVG+++VDMY+  GEI  A+K   EM    + V+W+  + G+ +  + EEA+  F + 
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEM-PLRNVVTWSGMMYGYAQMGENEEALWLFKEA 208

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           +  + A +++++S+++  C+    L    QI    +KS F+S+  VGSSL+  Y+KCG  
Sbjct: 209 LFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDL 268

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           E A +VF ++   ++  WN+M+KA +Q+   +K I LF++M + G++P   TFL VL+AC
Sbjct: 269 EGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GLV +G+  F+ ++KE  I P + HY+ +VD+LGRAGKLE AL  ++N+PI PT  +
Sbjct: 329 SHAGLVDEGKYYFD-LMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESV 387

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L  +C  H + ++A F + ++ EL P  + ++++LSN YA  G   DA + RKL++ 
Sbjct: 388 WGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------- 703
           +   KE G SW+E  NK++ F +  + H    ++YEKL +L +++E  G+          
Sbjct: 448 RGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLRE 507

Query: 704 --DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
              +EK   + YHSERLA+ FGLI+ PA       + L
Sbjct: 508 VDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNL 545



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 195/426 (45%), Gaps = 5/426 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           + ++L   +R   +  G + H  I K+ +     V  +L+N Y+K           +  P
Sbjct: 18  ICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                + + +++ +A+N L   +  F  K+    ++P+ +   +    CG LS  D GK 
Sbjct: 78  QKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKS 137

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  +MK  Y +   V ++L+ MY KCG +  A  +F+ +  RNV++W+ ++ G+ Q G+
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGE 197

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E+ L L      + +  N+Y+F+  ++ CA+     +G       IK       FVG++
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSS 257

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +V +YS  G++  A +   E+      + WNA +    ++  T++ IE F +M  +    
Sbjct: 258 LVSLYSKCGDLEGAYQVFDEVPMRNLGI-WNAMLKACAQHSHTQKVIELFKRMKLSGMKP 316

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           +  T+ ++L ACS    +   +     + +S+ E      +SL++   + G  E+A  + 
Sbjct: 317 NFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIV 376

Query: 480 SQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS-ACSHSGL 537
           + +      S W +++ + + +     A    +K+   G  P +S     LS A +  G 
Sbjct: 377 TNMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELG--PVSSGMHISLSNAYAADGR 434

Query: 538 VQDGQK 543
            +D  K
Sbjct: 435 FEDAAK 440


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 177/548 (32%), Positives = 295/548 (53%), Gaps = 3/548 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C      E+G   HA    +    D FV  SL+ MY  CG+++    V   M    
Sbjct: 129 VIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERT 188

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GY KN    +A   F  + G  ++P+  T  ++L +C  L  ++ G+++HA
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHA 248

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                      +V N+LL MY KCG M++A+ +F  + +R+V+SWT ++NG+  +GD   
Sbjct: 249 LVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARS 308

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M+ + + PN  T    L++CASL +   G   H   I++ +     V TA++D
Sbjct: 309 ALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALID 368

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    +  + +   +  K  ++  WNA I+G   N  + +AIE F QM+      ++ 
Sbjct: 369 MYAKCNNVNLSFRVFSKTSKQRTA-PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDA 427

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L A + L  L     +H  +++S F S + V + LI+ Y+KCGS E A  +F+ +
Sbjct: 428 TLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGI 487

Query: 483 TAAD--VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
              D  +++W+++I  Y  +G    AI LF++MV  G++P   TF ++L ACSH+GLV +
Sbjct: 488 PKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDE 547

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G  +F+ M+++  +     HY+C++DLLGRAG+LE A   I  +  +P   +W  L  +C
Sbjct: 548 GLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
             H ++++ E  +K + EL+P +   YV L+N+Y+  G   DAE  R +M    + K P 
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667

Query: 661 CSWIEVYN 668
            S IEV N
Sbjct: 668 HSLIEVRN 675



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 137/525 (26%), Positives = 255/525 (48%), Gaps = 12/525 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF---VTASLVNMYAKCGDIKSMVAVVKQMP 179
           +L  C+  + +   ++ HA      +    +   + +SL   YA  G       +  ++ 
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELR 83

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGK 238
              + S N ++  Y  + L   A   F+++     + P++YTY  ++  CG     + G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +HA+T+   + S   V N+L+ MY+ CG ME A  VF+ + +R ++SW  +ING+ ++G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ L +   M   GI+P+  T    L  C+ L+   +G   HA V  + +     V  
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G + EA+    EM K    VSW   + G+  N     A+    QM++ ++ 
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKR-DVVSWTTMMNGYILNGDARSAL-LLCQMMQFESV 321

Query: 419 CDEF-TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
              F T +S+L AC+ L SL     +H   ++ K ES V V ++LI+ Y KC +   + R
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VFS+ +      WN++I     NG +RKAI LF++M++E + P ++T  ++L A +    
Sbjct: 382 VFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPL 596
           +Q  + +   +++  G L      + ++D+  + G LE A    + +P K    I W  +
Sbjct: 442 LQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500

Query: 597 FAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGL 639
            A    H   + A  +  Q+++  + P++   + ++ +  + AGL
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNE-ITFTSILHACSHAGL 544



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 231/480 (48%), Gaps = 26/480 (5%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT---AVSNALLTMYIKCGMMEDAESVFE 277
           Y ++L  C S  +I   KQ+HA T+ L  LS      + ++L   Y   G    A  +F+
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID-PNEYTFTVALASCASLRNSH 336
            L   ++ SW A+I  +   G     L L   M   G   P+ YT+   + +C       
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           MG + HA+ +  G     FV  +++ MY   GE+ E  +++ ++ +  + VSWN  I G+
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEM-EVARRVFDLMRERTLVSWNTMINGY 199

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
           F+N   +EA+  F  M+      D  T  S+L  CS L  L    ++H+ +       ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +SL++ Y KCG+ ++A+ +F ++   DVVSW +M+  Y  NG AR A++L + M  E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPEEAHYSCMVDLLGRAGK 573
            ++P   T  +VLSAC+    ++ G+ +    ++   E  ++ E A    ++D+  +   
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETA----LIDMYAKCNN 375

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KMAEFISKQILE-LDPDDAAVYVTL 630
           + ++    S    + TAP W  + + C  H+ L  K  E   + ++E +DP+DA    TL
Sbjct: 376 VNLSFRVFSKTSKQRTAP-WNAIISGC-IHNGLSRKAIELFKQMLMEAVDPNDA----TL 429

Query: 631 SNMYAEAGLQADAEEQRK----LMKMKEISK-EPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
           +++        D ++ R     L++   +S+ E     I++Y+K     S +   + +PK
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 176/376 (46%), Gaps = 17/376 (4%)

Query: 71  YMNIEEKGISRNGYSTRN-------DSFPDGFIDDGCSNTVPVTCYSLESLLDKQF---- 119
           YMN  E  ++R  +           ++  +G+  +GC   V       + ++ K      
Sbjct: 168 YMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC---VKEALMVFDWMIGKGIEPDC 224

Query: 120 --VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
             V+ VL  CS  + LE+GRR HAL+    +  D  V  SL++MYAKCG++     +  +
Sbjct: 225 ATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYE 284

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           M   D+ S   ++ GY  N     A      +    V+PN  T +++L+ C SL ++  G
Sbjct: 285 MDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHG 344

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + LH   ++ +  S+  V  AL+ MY KC  +  +  VF    ++    W AII+G   +
Sbjct: 345 RCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHN 404

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   K + L   M  + +DPN+ T    L + A L +       H  +I+ G      V 
Sbjct: 405 GLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVA 464

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           T ++D+YS  G +  A      + K     ++W+A IAG+  +   E AI  F QMV++ 
Sbjct: 465 TILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSG 524

Query: 417 AACDEFTYSSILKACS 432
              +E T++SIL ACS
Sbjct: 525 VKPNEITFTSILHACS 540


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 311/582 (53%), Gaps = 6/582 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           L  C     +  G   H  + K    G D +V +SL+ MY KCG +   + +  ++   D
Sbjct: 67  LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I + + +++G+ KN    QA  FF ++    DV P+  T  T+++ C  LS    G+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++  + +  ++ N+LL  Y K    ++A ++F+ + +++VISW+ +I  + Q+G   
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L +   M +DG +PN  T    L +CA+  +   G   H   I++G+     V TA+V
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACD 420
           DMY       EA      + +    VSW A I+GF  N     +IE FS M+  N+   D
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                 +L +CS L  L   +  HS ++K  F+SN  +G+SL+E Y++CGS  +A +VF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQ 539
            +   D V W S+I  Y  +G+  KA+  F  MV    ++P   TFL++LSACSH+GL+ 
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G ++F+ MV +Y + P   HY+ +VDLLGR G L+ A+     +P  PT  I   L  A
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H + +MAE ++K++ EL+ + A  Y+ +SN+Y   G   + E+ R  +K + I K  
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL-MQQIEDI 700
             S IE+  K++RF + ++ H E   VY  LK+L +   ED+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDL 647



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 173/332 (52%), Gaps = 7/332 (2%)

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  +F  + +R++  W  ++    +   +E+ L     M  D   P+ +T  VAL +C 
Sbjct: 12  DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71

Query: 331 SLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            LR  + G M H   +K+ + LG   +VG++++ MY   G + EA +   E+ K    V+
Sbjct: 72  ELREVNYGEMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVT 129

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           W++ ++GF +N    +A+E F +MV  +D   D  T  +++ AC+ L +      +H  +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           ++  F +++ + +SL+  Y K  ++++A  +F  +   DV+SW+++I  Y QNG A +A+
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
           ++F  M+ +G  P  +T L VL AC+ +  ++ G+K  E  +++ G+  E    + +VD+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDM 308

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
             +    E A    S +P K     W  L + 
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVS-WVALISG 339



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 3/319 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +I ++S C++     LGR  H  + +     D  +  SL+N YAK    K  V + 
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K +   D+ S + ++A Y +N    +A   F  +     +PN  T   +L  C +   ++
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G++ H   ++    ++  VS AL+ MY+KC   E+A +VF  + +++V+SW A+I+GF 
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341

Query: 296 QHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +G   + +    +M  E+   P+       L SC+ L        FH+ VIK G     
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F+G ++V++YS  G +  A K    +     +V W + I G+  + K  +A+E F+ MV+
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVK 460

Query: 415 -NDAACDEFTYSSILKACS 432
            ++   +E T+ SIL ACS
Sbjct: 461 SSEVKPNEVTFLSILSACS 479



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 4/161 (2%)

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA ++F ++T   +  WN+++K+ S+  +  + +  F  M  +  +P N T    L AC 
Sbjct: 12  DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
               V  G+ +   + K+  +  +    S ++ +  + G++  AL     L  KP    W
Sbjct: 72  ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTW 130

Query: 594 RPLFAAC-RCHSDLKMAEFISKQILELD--PDDAAVYVTLS 631
             + +   +  S  +  EF  + ++  D  PD   +   +S
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 311/582 (53%), Gaps = 6/582 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           L  C     +  G   H  + K    G D +V +SL+ MY KCG +   + +  ++   D
Sbjct: 48  LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 107

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           I + + +++G+ KN    QA  FF ++    DV P+  T  T+++ C  LS    G+ +H
Sbjct: 108 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 167

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              ++  + +  ++ N+LL  Y K    ++A ++F+ + +++VISW+ +I  + Q+G   
Sbjct: 168 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 227

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L +   M +DG +PN  T    L +CA+  +   G   H   I++G+     V TA+V
Sbjct: 228 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 287

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACD 420
           DMY       EA      + +    VSW A I+GF  N     +IE FS M+  N+   D
Sbjct: 288 DMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 346

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                 +L +CS L  L   +  HS ++K  F+SN  +G+SL+E Y++CGS  +A +VF+
Sbjct: 347 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 406

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQ 539
            +   D V W S+I  Y  +G+  KA+  F  MV    ++P   TFL++LSACSH+GL+ 
Sbjct: 407 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 466

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +G ++F+ MV +Y + P   HY+ +VDLLGR G L+ A+     +P  PT  I   L  A
Sbjct: 467 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 526

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H + +MAE ++K++ EL+ + A  Y+ +SN+Y   G   + E+ R  +K + I K  
Sbjct: 527 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 586

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL-MQQIEDI 700
             S IE+  K++RF + ++ H E   VY  LK+L +   ED+
Sbjct: 587 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDL 628



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 169/324 (52%), Gaps = 7/324 (2%)

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +R++  W  ++    +   +E+ L     M  D   P+ +T  VAL +C  LR  + G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 339 YMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            M H   +K+ + LG   +VG++++ MY   G + EA +   E+ K    V+W++ ++GF
Sbjct: 61  EMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVTWSSMVSGF 118

Query: 397 FRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
            +N    +A+E F +MV  +D   D  T  +++ AC+ L +      +H  +++  F ++
Sbjct: 119 EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSND 178

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           + + +SL+  Y K  ++++A  +F  +   DV+SW+++I  Y QNG A +A+++F  M+ 
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 238

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           +G  P  +T L VL AC+ +  ++ G+K  E  +++ G+  E    + +VD+  +    E
Sbjct: 239 DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPE 297

Query: 576 IALIFISNLPIKPTAPIWRPLFAA 599
            A    S +P K     W  L + 
Sbjct: 298 EAYAVFSRIPRKDVVS-WVALISG 320



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 3/319 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +I ++S C++     LGR  H  + +     D  +  SL+N YAK    K  V + 
Sbjct: 143 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 202

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K +   D+ S + ++A Y +N    +A   F  +     +PN  T   +L  C +   ++
Sbjct: 203 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 262

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           +G++ H   ++    ++  VS AL+ MY+KC   E+A +VF  + +++V+SW A+I+GF 
Sbjct: 263 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 322

Query: 296 QHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +G   + +    +M  E+   P+       L SC+ L        FH+ VIK G     
Sbjct: 323 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 382

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           F+G ++V++YS  G +  A K    +     +V W + I G+  + K  +A+E F+ MV+
Sbjct: 383 FIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVK 441

Query: 415 -NDAACDEFTYSSILKACS 432
            ++   +E T+ SIL ACS
Sbjct: 442 SSEVKPNEVTFLSILSACS 460


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 177/548 (32%), Positives = 295/548 (53%), Gaps = 3/548 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C      E+G   HA    +    D FV  SL+ MY  CG+++    V   M    
Sbjct: 129 VIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERT 188

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++ GY KN    +A   F  + G  ++P+  T  ++L +C  L  ++ G+++HA
Sbjct: 189 LVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHA 248

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                      +V N+LL MY KCG M++A+ +F  + +R+V+SWT ++NG+  +GD   
Sbjct: 249 LVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARS 308

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L  +M+ + + PN  T    L++CASL +   G   H   I++ +     V TA++D
Sbjct: 309 ALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALID 368

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    +  + +   +  K  ++  WNA I+G   N  + +AIE F QM+      ++ 
Sbjct: 369 MYAKCNNVNLSFRVFSKXSKQRTA-PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDA 427

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +S+L A + L  L     +H  +++S F S + V + LI+ Y+KCGS E A  +F+ +
Sbjct: 428 TLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGI 487

Query: 483 TAAD--VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
              D  +++W+++I  Y  +G    AI LF++MV  G++P   TF ++L ACSH+GLV +
Sbjct: 488 PKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDE 547

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G  +F+ M+++  +     HY+C++DLLGRAG+LE A   I  +  +P   +W  L  +C
Sbjct: 548 GLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
             H ++++ E  +K + EL+P +   YV L+N+Y+  G   DAE  R +M    + K P 
Sbjct: 608 VIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPA 667

Query: 661 CSWIEVYN 668
            S IEV N
Sbjct: 668 HSLIEVRN 675



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/525 (26%), Positives = 256/525 (48%), Gaps = 12/525 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF---VTASLVNMYAKCGDIKSMVAVVKQMP 179
           +L  C+  + +   ++ HA      +    +   + +SL   YA CG       +  ++ 
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR 83

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ-PNHYTYSTMLAICGSLSAIDEGK 238
              + S N ++  Y  + L   A   F+++     + P++YTY  ++  CG     + G 
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +HA+T+   + S   V N+L+ MY+ CG ME A  VF+ + +R ++SW  +ING+ ++G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             ++ L +   M   GI+P+  T    L  C+ L+   +G   HA V  + +     V  
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G + EA+    EM K    VSW   + G+  N     A+    QM++ ++ 
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKR-DVVSWTTMMNGYILNGDARSAL-LLCQMMQFESV 321

Query: 419 CDEF-TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
              F T +S+L AC+ L SL     +H   ++ K ES V V ++LI+ Y KC +   + R
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VFS+ +      WN++I     NG +RKAI LF++M++E + P ++T  ++L A +    
Sbjct: 382 VFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPL 596
           +Q  + +   +++  G L      + ++D+  + G LE A    + +P K    I W  +
Sbjct: 442 LQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500

Query: 597 FAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGL 639
            A    H   + A  +  Q+++  + P++   + ++ +  + AGL
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNE-ITFTSILHACSHAGL 544



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 232/480 (48%), Gaps = 26/480 (5%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT---AVSNALLTMYIKCGMMEDAESVFE 277
           Y ++L  C S  +I   KQ+HA T+ L  LS      + ++L   Y  CG    A  +F+
Sbjct: 21  YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID-PNEYTFTVALASCASLRNSH 336
            L   ++ SW A+I  +   G     L L   M   G   P+ YT+   + +C       
Sbjct: 81  ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           MG + HA+ +  G     FV  +++ MY   GE+ E  +++ ++ +  + VSWN  I G+
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEM-EVARRVFDLMRERTLVSWNTMINGY 199

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
           F+N   +EA+  F  M+      D  T  S+L  CS L  L    ++H+ +       ++
Sbjct: 200 FKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDI 259

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +SL++ Y KCG+ ++A+ +F ++   DVVSW +M+  Y  NG AR A++L + M  E
Sbjct: 260 SVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFE 319

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPEEAHYSCMVDLLGRAGK 573
            ++P   T  +VLSAC+    ++ G+ +    ++   E  ++ E A    ++D+  +   
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETA----LIDMYAKCNN 375

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KMAEFISKQILE-LDPDDAAVYVTL 630
           + ++    S    + TAP W  + + C  H+ L  K  E   + ++E +DP+DA    TL
Sbjct: 376 VNLSFRVFSKXSKQRTAP-WNAIISGC-IHNGLSRKAIELFKQMLMEAVDPNDA----TL 429

Query: 631 SNMYAEAGLQADAEEQRK----LMKMKEISK-EPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
           +++        D ++ R     L++   +S+ E     I++Y+K     S +   + +PK
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 176/376 (46%), Gaps = 17/376 (4%)

Query: 71  YMNIEEKGISRNGYSTRN-------DSFPDGFIDDGCSNTVPVTCYSLESLLDKQF---- 119
           YMN  E  ++R  +           ++  +G+  +GC   V       + ++ K      
Sbjct: 168 YMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC---VKEALMVFDWMIGKGIEPDC 224

Query: 120 --VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
             V+ VL  CS  + LE+GRR HAL+    +  D  V  SL++MYAKCG++     +  +
Sbjct: 225 ATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYE 284

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           M   D+ S   ++ GY  N     A      +    V+PN  T +++L+ C SL ++  G
Sbjct: 285 MDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHG 344

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + LH   ++ +  S+  V  AL+ MY KC  +  +  VF    ++    W AII+G   +
Sbjct: 345 RCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHN 404

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   K + L   M  + +DPN+ T    L + A L +       H  +I+ G      V 
Sbjct: 405 GLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVA 464

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           T ++D+YS  G +  A      + K     ++W+A IAG+  +   E AI  F QMV++ 
Sbjct: 465 TILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSG 524

Query: 417 AACDEFTYSSILKACS 432
              +E T++SIL ACS
Sbjct: 525 VKPNEITFTSILHACS 540


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 302/593 (50%), Gaps = 3/593 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C     ++LGR+ H  + K+          +L++MY + G I     V   +   D
Sbjct: 264 IIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKD 323

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + S   ++ G+ +     +A   F  +   G   QPN + + ++ + C SL   + G+Q+
Sbjct: 324 LISWASMITGFTQLGYEIEALYLFRDMFRQGF-YQPNEFIFGSVFSACRSLLEPEFGRQI 382

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H    K           +L  MY K G +  A   F  +   +++SW AII  F   GD 
Sbjct: 383 HGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDV 442

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + +   C M   G+ P+  TF   L +C S    + G   H+ +IK G+     V  ++
Sbjct: 443 NEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSL 502

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+    + +A    K++ ++A+ VSWNA ++   ++++  E    F  M+ ++   D
Sbjct: 503 LTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPD 562

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T ++IL  C+ L SL    Q+H   VKS    +V V + LI+ Y KCGS + A  VF 
Sbjct: 563 NITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFG 622

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                D+VSW+S+I  Y+Q G   +A+ LF  M   G++P   T+L VLSACSH GLV++
Sbjct: 623 STQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEE 682

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   + +M  E GI P   H SCMVDLL RAG L  A  FI  +   P   +W+ L A+C
Sbjct: 683 GWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASC 742

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           + H ++ +AE  ++ IL+LDP ++A  V LSN++A  G   +    R LMK   + K PG
Sbjct: 743 KTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPG 802

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY 713
            SWI V ++I+ FFS++ SH +   +Y  L+ L  Q+ D G+   ++ D  ++
Sbjct: 803 QSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQRLDISIW 855



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 222/453 (49%), Gaps = 4/453 (0%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+    L+ G++ H  I K+    D  +   ++NMY KCG +K        M   ++ S 
Sbjct: 167 CTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSW 226

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
             +++GY++N   + A   ++++      P+  T+ +++  C     ID G+QLH   +K
Sbjct: 227 TIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIK 286

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
             Y       NAL++MY + G +  A  VF  +  +++ISW ++I GF Q G   + L L
Sbjct: 287 SGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYL 346

Query: 307 VCLMREDGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
              M   G   PNE+ F    ++C SL     G   H    K G+    F G ++ DMY+
Sbjct: 347 FRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYA 406

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G +  A +   ++ +S   VSWNA IA F  +    EAI  F QM+      D  T+ 
Sbjct: 407 KFGFLPSAIRAFYQI-ESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA- 484
           S+L AC    ++    QIHS I+K   +    V +SL+  Y KC +  DA  VF  ++  
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           A++VSWN+++ A  Q+ +A +   LF+ M+    +P N T   +L  C+    ++ G +V
Sbjct: 526 ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQV 585

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
               VK  G++ + +  + ++D+  + G L+ A
Sbjct: 586 HCFSVKS-GLVVDVSVSNRLIDMYAKCGSLKHA 617



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 200/442 (45%), Gaps = 7/442 (1%)

Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
            F+F  K   I ++ +  TY  ++  C S+ ++  GK++H   +K        + N +L 
Sbjct: 143 TFNFHPKNSSIQLESS--TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILN 200

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           MY KCG ++DA   F+ +  RNV+SWT +I+G+ Q+G     + +   M + G  P+  T
Sbjct: 201 MYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLT 260

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
           F   + +C    +  +G   H  VIK G         A++ MY+  G+I  A      M 
Sbjct: 261 FGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFT-MI 319

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-AACDEFTYSSILKACSLLPSLATC 440
            +   +SW + I GF +     EA+  F  M R      +EF + S+  AC  L      
Sbjct: 320 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            QIH    K     NV  G SL + Y K G    A R F Q+ + D+VSWN++I A+S +
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   +AI  F +M+  G+ P   TFL++L AC     +  G ++   ++K  G+  E A 
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIK-IGLDKEAAV 498

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--E 618
            + ++ +  +   L  A     ++        W  + +AC  H        + K +L  E
Sbjct: 499 CNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSE 558

Query: 619 LDPDDAAVYVTLSNMYAEAGLQ 640
             PD+  +   L      A L+
Sbjct: 559 NKPDNITITTILGTCAELASLE 580



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 141/276 (51%), Gaps = 2/276 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP- 179
           + +L  C     +  G + H+ I K  +  +  V  SL+ MY KC ++     V K +  
Sbjct: 465 LSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSE 524

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ S N +L+   ++    + F  F  +   + +P++ T +T+L  C  L++++ G Q
Sbjct: 525 NANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQ 584

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  ++K   +   +VSN L+ MY KCG ++ A  VF      +++SW+++I G+ Q G 
Sbjct: 585 VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGL 644

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV-IKRGMALGDFVGT 358
             + L L  +M+  G+ PNE T+   L++C+ +     G+ F+  + I+ G+       +
Sbjct: 645 GHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVS 704

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +VD+ +  G ++EA+  +K+MG +     W   +A
Sbjct: 705 CMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLA 740



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E+  D   +  +L  C+    LE+G + H    K+ +  D  V+  L++MYAKCG +K  
Sbjct: 558 ENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHA 617

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V       DI S + L+ GYA+  L  +A + F  +  + VQPN  TY  +L+ C  +
Sbjct: 618 RDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHI 677

Query: 232 SAIDEGKQLHAQTMKLQY---LSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISW 287
             ++EG   +  TM+++     ++  VS  ++ +  + G + +AE+  + +    ++  W
Sbjct: 678 GLVEEGWHFY-NTMEIELGIPPTREHVS-CMVDLLARAGCLYEAENFIKKMGFNPDITMW 735

Query: 288 TAIINGFKQHGDYE 301
             ++   K HG+ +
Sbjct: 736 KTLLASCKTHGNVD 749


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 189/613 (30%), Positives = 320/613 (52%), Gaps = 22/613 (3%)

Query: 82  NGYST--RNDSFPDGF----IDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLEL 135
           NGY+    +DS   GF    +D    N V   C              VLS C+ +  ++L
Sbjct: 208 NGYAKCGASDSVIKGFSLMRMDQISPNAVTFDC--------------VLSVCASKLLIDL 253

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G + H L+  + +  +  +  SL++MY+KCG     + + + M   D  + NC+++GY +
Sbjct: 254 GVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQ 313

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           + L +++  FF ++    V P+  T+S++L        ++  +Q+H   M+        +
Sbjct: 314 SGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFL 373

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           ++AL+  Y KC  +  A+ +F      +V+ +TA+I+G+  +G     L +   + +  I
Sbjct: 374 TSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKI 433

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            PNE T    L     L    +G   H  +IK+G      +G A++DMY+  G +  A +
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 493

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + K    VSWN+ I    ++     AI+ F QM  +    D  + S+ L AC+ LP
Sbjct: 494 IFGRLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLP 552

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           S +  + IH  ++K     +V+  S+LI+ Y KCG+ + A  VF  +   ++VSWNS+I 
Sbjct: 553 SESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIA 612

Query: 496 AYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           AY  +G+ + ++ LF +MV + G RP   TFL ++S C H G V +G + F SM ++YGI
Sbjct: 613 AYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGI 672

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
            P++ HY+C+VDL GRAG+L  A   + ++P  P A +W  L  A R H ++++A+  S 
Sbjct: 673 QPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASS 732

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++++LDP ++  YV +SN +A  G      + R LMK +E+ K PG SWIE+    + F 
Sbjct: 733 RLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFV 792

Query: 675 SQNKSHSEMPKVY 687
           S + +H E   +Y
Sbjct: 793 SGDVNHPESSHIY 805



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 238/493 (48%), Gaps = 8/493 (1%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           LE  L ++  + +L  CS    L  G++ HA +    + GD +    ++ MYA CG   +
Sbjct: 26  LEETLPRRLSL-LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSN 84

Query: 171 MVAVVKQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
              +  ++      I   N +++ + +  L +QA +F+ K+    V P+  T+  ++  C
Sbjct: 85  CGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 144

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            +L      + L      L       V+++L+  Y++ G ++ A  +F+ ++Q++ + W 
Sbjct: 145 VALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWN 204

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            ++NG+ + G  +  ++   LMR D I PN  TF   L+ CAS     +G   H  V+  
Sbjct: 205 VMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 264

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G+     +  +++ MYS  G   +A K  + M + A +V+WN  I+G+ ++   EE++  
Sbjct: 265 GLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSR-ADTVTWNCMISGYVQSGLMEESLIF 323

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +M+ +    D  T+SS+L + S   +L  C QIH  I++     ++ + S+LI+AY K
Sbjct: 324 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFK 383

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           C     A+++FSQ  + DVV + +MI  Y  NG    A+ +F  +V   I P   T +++
Sbjct: 384 CRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSI 443

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIK 587
           L        ++ G+++   ++K+        +  C ++D+  + G++ +A      L  +
Sbjct: 444 LPVIGGLLALKLGRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKR 501

Query: 588 PTAPIWRPLFAAC 600
                W  +   C
Sbjct: 502 DIVS-WNSMITRC 513



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 221/457 (48%), Gaps = 3/457 (0%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           ++FV +SL+  Y + G I     +  ++   D    N +L GYAK    D     F  + 
Sbjct: 168 NEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMR 227

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              + PN  T+  +L++C S   ID G QLH   +      + ++ N+LL+MY KCG  +
Sbjct: 228 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFD 287

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           DA  +F  + + + ++W  +I+G+ Q G  E+ L     M   G+ P+  TF+  L S +
Sbjct: 288 DAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVS 347

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
              N       H  +++  ++L  F+ +A++D Y     +  A+K   +   S   V + 
Sbjct: 348 KFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQC-NSVDVVVFT 406

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           A I+G+  N    +A+E F  +V+   + +E T  SIL     L +L    ++H  I+K 
Sbjct: 407 AMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKK 466

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
            F++  ++G ++I+ Y KCG    A  +F +L+  D+VSWNSMI   +Q+     AI +F
Sbjct: 467 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIF 526

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M V GI     +  A LSAC++      G+ +   M+K + +  +    S ++D+  +
Sbjct: 527 RQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIK-HSLALDVYSESTLIDMYAK 585

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
            G L+ A+     +  K     W  + AA   H  LK
Sbjct: 586 CGNLKAAMNVFDTMKEKNIVS-WNSIIAAYGNHGKLK 621


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 184/591 (31%), Positives = 327/591 (55%), Gaps = 20/591 (3%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G + H+L  +    GD +V +SLV +Y++CGD+ +   V  +M   D+     L++ 
Sbjct: 109 LRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSA 168

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           + ++  F+ A     ++    V+PN +T   M +I GS      G+Q+HA  +K   L  
Sbjct: 169 FCRSGEFELAVDTLHQMLRQGVEPNEHT---MASILGSCCPFVLGEQVHAYMIKAMGLHS 225

Query: 253 TAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
            ++  S+AL+  Y +    + A++VF  L  +NV++W +++    + G  E  L++   M
Sbjct: 226 QSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDM 285

Query: 311 REDGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
             +G+ +PNE+ F++AL +C S+    +G   H+  IKR +     V  A++ MY  +  
Sbjct: 286 ISEGVVEPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNALLSMYGRICH 342

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + E +  LK++ ++   VSW   I+  F+N  +E+AI   S +       +++ +SS L 
Sbjct: 343 VQELEAVLKDI-ENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALS 401

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +C+ L  L    Q H   +K   +  +  G++LI  Y+KCG    A+  F  +   DV S
Sbjct: 402 SCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTS 461

Query: 490 WNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           WNS+I  Y+Q+G A  A+ +F +M  + G  P  S+FL VL+AC+H+G+V +G  +F ++
Sbjct: 462 WNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAI 521

Query: 549 VK--EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
               ++G  P  +HY+C+VD++GR+G+ + AL  +  +P +P A IW+ L A+CR H +L
Sbjct: 522 ASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNL 581

Query: 607 KMAEFISKQILEL----DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           +  E  +++++EL    +  D+A YV +S ++A  G   DA   R+ M    + KE GCS
Sbjct: 582 ETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAGCS 641

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLY 713
           W+EV+N+++ F +++KSH +   +Y+ L +L   ++D   T  + ED  L+
Sbjct: 642 WVEVHNEVHTFVARDKSHPDSASIYQILWELFDAMQD---TACDAEDAELF 689



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 227/475 (47%), Gaps = 17/475 (3%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +   + +  +MP  +I +    ++G  +N   + A + F  +    V PN + ++ 
Sbjct: 39  KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            LA C   SA+  G+Q+H+  ++  +   + V ++L+ +Y +CG +  A+ VF+ +   +
Sbjct: 99  ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+ +T++++ F + G++E  +  +  M   G++PNE+T    L SC       +G   HA
Sbjct: 159 VVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFV---LGEQVHA 215

Query: 344 QVIKRGMALGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            +IK  M L     +  +A++D YS   E   AK     +    + V+W + +    R+ 
Sbjct: 216 YMIK-AMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNL-HCKNVVTWCSMMQLHIRDG 273

Query: 401 KTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
           + E+A++ F  M+       +EF +S  L AC    S+A   Q+HS  +K    S++ V 
Sbjct: 274 RPEDALQVFDDMISEGVVEPNEFAFSIALGACG---SIALGRQLHSSAIKRNLTSDLRVS 330

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  Y +    ++ E V   +   D+VSW + I A  QNG + KAI L   +   G+ 
Sbjct: 331 NALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLM 390

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P +  F + LS+C+   L+  G++ F  +  + G   +    + +++L  + G++  A +
Sbjct: 391 PNDYAFSSALSSCADLALLDQGRQ-FHCLALKLGCDLKICTGNALINLYSKCGQIAPAKL 449

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI---SKQILELDPDDAAVYVTLS 631
               +  +     W  L      H D  MA  +    + I   +PD+++    L+
Sbjct: 450 AFDVMDHRDVTS-WNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLA 503



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 160/295 (54%), Gaps = 10/295 (3%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++N+++WT+ ++G  ++G  E  +     M   G+ PN+
Sbjct: 34  LDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPND 93

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           + F  ALA+CA       G   H+  ++ G A   +VG+++V++YS  G++  AK     
Sbjct: 94  FAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDR 153

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M +S   V + + ++ F R+ + E A++   QM+R     +E T +SIL +C        
Sbjct: 154 M-ESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCC---PFVL 209

Query: 440 CEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
            EQ+H+ ++K+      +++  S+LI+ Y++   ++ A+ VF+ L   +VV+W SM++ +
Sbjct: 210 GEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLH 269

Query: 498 SQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
            ++GR   A+ +F+ M+ EG + P    F   L AC   G +  G+++  S +K 
Sbjct: 270 IRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKR 321


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 199/682 (29%), Positives = 340/682 (49%), Gaps = 70/682 (10%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   +  VL  C        G  +H LI       + F+  +LV MY++CG ++    +
Sbjct: 8   LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67

Query: 175 ---VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI------DVQPNHYTYSTML 225
              + Q    D+ S N +++ + K++    A   F K+  I      + + +  +   +L
Sbjct: 68  FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 127

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             CGSL A+ + K++H   ++        V NAL+  Y KCG+ME+A  VF  +  ++V+
Sbjct: 128 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 187

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGID----------------------------- 316
           SW A++ G+ Q G+++    L   MR++ I                              
Sbjct: 188 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 247

Query: 317 ------PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL--GDFVG--------TAI 360
                 PN  T    L++CASL     G   HA  +K  +     DF G         A+
Sbjct: 248 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 307

Query: 361 VDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN--DA 417
           +DMYS       A+    ++  +  + V+W   I G  +   + +A++ F +M+      
Sbjct: 308 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 367

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGSSLIEAYNKCGSWEDA 475
           A + +T S IL AC+ L ++   +QIH+ +++  +++S+ + V + LI  Y+KCG  + A
Sbjct: 368 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTA 427

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  ++    +SW SM+  Y  +GR  +A+ +F+KM   G  P + TFL VL ACSH 
Sbjct: 428 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 487

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G+V  G   F+SM  +YG+ P   HY+  +DLL R G+L+ A   + ++P++PTA +W  
Sbjct: 488 GMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 547

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR HS++++AE    +++E++ ++   Y  +SN+YA AG   D    R LMK   I
Sbjct: 548 LLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGI 607

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K PGCSW++       FF  ++SH   P++Y  L+ L+ +I+ +G+            +
Sbjct: 608 KKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDE 667

Query: 705 NEKEDRVLYHSERLAVGFGLIS 726
            EK + ++ HSE+LA+ +GL++
Sbjct: 668 EEKNNLLVEHSEKLALAYGLLT 689



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 9/255 (3%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   G   + +T    L +C  L +   G  FH  +   G     F+  A+V MYS  G 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 370 IWEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQMV------RNDAACDE 421
           + EA     E+ +      +SWN+ ++   ++     A++ FS+M         +   D 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            +  +IL AC  L ++   +++H   +++    +V VG++LI+AY KCG  E+A +VF+ 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   DVVSWN+M+  YSQ+G  + A  LF+ M  E I     T+ AV++  S  G   + 
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 542 QKVFESMVKEYGILP 556
             VF  M+   G LP
Sbjct: 241 LNVFRQMIFS-GSLP 254


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 196/602 (32%), Positives = 311/602 (51%), Gaps = 33/602 (5%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + FV + L++ Y+ C  +     V   +   D      +++ Y++N   + AF       
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR------ 249

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
                          A   SL AI   +Q +H   +K    ++  V  ALL MY KCG +
Sbjct: 250 --------------CAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDI 295

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +DA   FE +   +VI  + +I+ + Q    E+   L   +    + PNEY+ +  L +C
Sbjct: 296 KDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQAC 355

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
            ++     G   H   IK G     FVG A++D Y+   ++  + K    + + A+ VSW
Sbjct: 356 TNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL-RDANEVSW 414

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N  + GF ++   EEA+  F +M      C + TYSS+L+AC+   S+    QIH  I K
Sbjct: 415 NTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           S F ++  +G+SLI+ Y KCG   DA +VF  L   D++SWN++I  Y+ +G+A  A+ L
Sbjct: 475 STFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALEL 534

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F++M    +   + TF+A+LS C  +GLV  G  +F+SM  ++GI P   HY+C+V LLG
Sbjct: 535 FDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLG 594

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+L  AL FI ++P  P+A +WR L ++C  H ++ +  F +++ILE++P D   YV 
Sbjct: 595 RAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVL 654

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSNMYA AG        RK M+   + K PG SW+E+  +I+ F   +  H +M  +   
Sbjct: 655 LSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAM 714

Query: 690 LKQLMQQ------IEDIG----HTDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRT 738
           L+ L  +      I DI       D E++ R+L+ HSERLA+ +GL+  P  +     + 
Sbjct: 715 LEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKN 774

Query: 739 LE 740
           L 
Sbjct: 775 LR 776



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 210/417 (50%), Gaps = 22/417 (5%)

Query: 136 GRRYHALITKTAVCG--DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           GR  H  + +    G  D F    L+NMY K G + S   +  +MP  ++ S   L+  +
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+   F+ A + F +L     + N +  +TML +  ++ A      +H+   KL +    
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V + L+  Y  C ++ DAE VF G+V+++ + WTA+++ + ++                
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEN---------------- 241

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
             D  E  F  A  SC+ L  S      H   IK        VG A++DMY+  G+I +A
Sbjct: 242 --DCPENAFRCA-QSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 298

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +    EM      +  +  I+ + ++ + E+A E F +++R+    +E++ SS+L+AC+ 
Sbjct: 299 RLAF-EMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTN 357

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           +  L   +QIH+  +K   ES++ VG++L++ Y KC   + + ++FS L  A+ VSWN++
Sbjct: 358 MVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTI 417

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +  +SQ+G   +A+ +F +M    +  T  T+ +VL AC+ +  ++   ++  S+ K
Sbjct: 418 VVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEK 474


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 185/562 (32%), Positives = 306/562 (54%), Gaps = 22/562 (3%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +M   D+ S N ++ G         A   F ++     + N  +++TM+        +  
Sbjct: 68  RMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMP----EKNVISWTTMVN-----GYLKF 118

Query: 237 GKQLHAQTMKLQ-YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           G+   AQ + L  ++   A  NA++  Y + G +E+   +FE +  R+VISWT++I G  
Sbjct: 119 GRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLD 178

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G  E+ L +   M   G++P   TF   L++CA+    ++G   H  V+K G    +F
Sbjct: 179 LNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF 238

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  +++  Y+   +I  A K   E   + + V W A +  +  N K ++A+  F  M + 
Sbjct: 239 ISVSLITFYANCMKIEHAHKIFNET-LTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKM 297

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
            A  ++ T+S  LKAC  L +L   ++IH+  +K   E++V VG+SL+  Y +CG+   A
Sbjct: 298 GALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSA 357

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VF  +   D+VSWNS+I   +Q+G    A+I F +M+  G+ P   TF  +LSACS S
Sbjct: 358 VAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRS 417

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G++  G+  FE + +    +    HY+CMVD+LGR GKL+ A   +  +P+K  + IW  
Sbjct: 418 GMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLA 477

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L +ACR HS+L++AE  +K IL+L+P+ ++ YV LSN+YA AG  AD    R  MK   +
Sbjct: 478 LLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGL 537

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            K+PG SW+ +  K + F S ++SH    ++YEKL  L +++++ G+            D
Sbjct: 538 VKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVED 597

Query: 705 NEKEDRVLYHSERLAVGFGLIS 726
            +KE+ + +HSERLA+ FGL+S
Sbjct: 598 EQKEEMLSFHSERLAIAFGLVS 619



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 231/526 (43%), Gaps = 71/526 (13%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++V+ Y + G ++  V + ++MP  D+ S   ++ G   N   ++A   F K+    V+P
Sbjct: 141 AMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEP 200

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
              T++ +L+ C +    + G Q+H   +KL       +S +L+T Y  C  +E A  +F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
              + +NV+ WTA++  +  +  ++  LR+   M + G  PN+ TF++ L +C  L    
Sbjct: 261 NETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALD 320

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H   IK G+    FVG ++V MY+  G +  A    + + +    VSWN+ I G 
Sbjct: 321 KGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEK-DIVSWNSIIVGS 379

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS----LLPSLATCEQIHSRIVKSKF 452
            ++     A+  F+QM+R     +E T++ +L ACS    LL      E I      S++
Sbjct: 380 AQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI------SRY 433

Query: 453 ESNV----HVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA----------- 496
           +SNV    H  + +++   +CG  ++AE +   +   A+ + W +++ A           
Sbjct: 434 KSNVLRPQHY-ACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAE 492

Query: 497 -----------------------YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
                                  Y+  GR      +  KM   G+     +   VL    
Sbjct: 493 RAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKK 552

Query: 534 HSGLVQD-----GQKVFESM------VKEYGILPEEAHYSCMVD-------LLGRAGKLE 575
           H  L  D      ++++E +      +KE+G +P++      V+       L   + +L 
Sbjct: 553 HEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLA 612

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLK-MAEFISKQILELD 620
           IA   +S +    T  + + L     CHS +K M++ + ++I+  D
Sbjct: 613 IAFGLVSTVE-GSTITVMKNLRVCGDCHSVIKLMSKIVGRKIVVRD 657



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 1/298 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+      LG + H  + K      +F++ SL+  YA C  I+    +  +    +
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKN 267

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +     LL  Y  N     A   F  +  +   PN  T+S  L  C  L A+D+GK++H 
Sbjct: 268 VVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHT 327

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   +   V N+L+ MY +CG +  A +VF  + +++++SW +II G  QHG    
Sbjct: 328 MAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLW 387

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIV 361
            L     M   G+DPNE TFT  L++C+       G  F   + + +   L       +V
Sbjct: 388 ALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMV 447

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           D+    G++ EA++ ++ M   A+S+ W A ++    +   E A  A   ++  +  C
Sbjct: 448 DILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNC 505



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 178/447 (39%), Gaps = 58/447 (12%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           LA + KN   DQA   F K+      PN + Y+ M+A                       
Sbjct: 19  LANHLKNQRLDQARLIFDKIP----SPNLHLYTKMIA----------------------- 51

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                        Y +   + DA  +F+ +  R+V+SW ++I G    G+     RL   
Sbjct: 52  ------------GYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDE 99

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHM--GYMFHAQVIKRGMALGDFVG-TAIVDMYSG 366
           M E  +            S  ++ N ++  G +  AQ +   M + D     A+V  Y  
Sbjct: 100 MPEKNV-----------ISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFE 148

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G + E  +  +EM      +SW + I G   N K+EEA+  F +M+R+       T++ 
Sbjct: 149 NGRVEEGVRLFEEM-PVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFAC 207

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L AC+         Q+H  +VK     +  +  SLI  Y  C   E A ++F++    +
Sbjct: 208 VLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKN 267

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           VV W +++ AY  N + + A+ +F  M   G  P  STF   L AC     +  G+++  
Sbjct: 268 VVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEI-H 326

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           +M  + G+  +    + +V +    G +  A+    N+  K     W  +      H   
Sbjct: 327 TMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVS-WNSIIVGSAQHGFG 385

Query: 607 KMAEFISKQILE--LDPDDAAVYVTLS 631
             A     Q++   +DP++      LS
Sbjct: 386 LWALIFFNQMIRRGVDPNEITFTGLLS 412


>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
 gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
          Length = 561

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 193/546 (35%), Positives = 293/546 (53%), Gaps = 8/546 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C   E   +G   H    K     D FV  SL+ MY+ CGD++S   V   +   D 
Sbjct: 17  LQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESANKVFGCVVQKDA 76

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
              N ++ G  KN   ++    F K+    + P  +TYS +L  CG L     G+ +HAQ
Sbjct: 77  VLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQ 136

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            + L  L+   + NALL MY  CG  E   +VF  +   +++SW ++I+G+ ++G+    
Sbjct: 137 VIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMISGYAENGEGADA 196

Query: 304 LRLVCLMREDGI---DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + L   ++  G+    P+EYTF   +++ ++   +  G   HAQV+K G     F+GT +
Sbjct: 197 MNL--FLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTTL 254

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY   G+I E+ +Q+  M +    V W   I G  R    E AI+ FS M       D
Sbjct: 255 LSMYLKNGDI-ESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKID 313

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
            F  S  L AC+ L +L   E IH++ VK   ++ + V  SL+  Y K G    A  +FS
Sbjct: 314 SFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFS 373

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q++  D+  WNSM+  YSQ+G A +A+I+F K++V G RP   TFL++LSACSHSGLV++
Sbjct: 374 QVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHSGLVEE 433

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIFISNLPIKPTAPIWRPLFAA 599
           G K+  S +K+  ++P   HYSCMV LL RAG L E   + I +   K    +WR L ++
Sbjct: 434 G-KLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLSS 492

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           C    +LK+    +++IL+L+P+D+A ++ LSN+YA AG      E R+ +    I K+P
Sbjct: 493 CVNKRNLKIGVRAAEEILQLEPEDSATHILLSNLYAAAGRWEAVAEMRRKISGLMIEKDP 552

Query: 660 GCSWIE 665
           G SWIE
Sbjct: 553 GLSWIE 558



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 212/448 (47%), Gaps = 5/448 (1%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           + PN  T+S+ L  C  L     G  +H Q++K  + +   V  +LL MY  CG +E A 
Sbjct: 6   LTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESAN 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VF  +VQ++ + W ++I G  ++   E+ + L   M   GI P E+T+++ L +C  L 
Sbjct: 66  KVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLG 125

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +   G + HAQVI   +     +  A++DMY   G+         ++ ++   VSWN+ I
Sbjct: 126 DCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKI-ENPDLVSWNSMI 184

Query: 394 AGFFRNQKTEEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           +G+  N +  +A+  F Q+V       DE+T+++++ A S   +    + +H++++K   
Sbjct: 185 SGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGS 244

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E +V +G++L+  Y K G  E AE+VF+ +   DVV W  MI  +S+ G    AI LF  
Sbjct: 245 ERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSM 304

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M  EG +  +      LSAC+    +  G+ +    VK  G   E +    +V +  + G
Sbjct: 305 MCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKR-GCDAEISVCGSLVHMYAKNG 363

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-ELDPDDAAVYVTLS 631
            L  A    S +   P    W  +      H   + A  I  +IL      D   +++L 
Sbjct: 364 DLHAARSIFSQVS-NPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLL 422

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEP 659
           +  + +GL  + +     +K  ++   P
Sbjct: 423 SACSHSGLVEEGKLLWSHIKKNDVIPGP 450



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 187/362 (51%), Gaps = 2/362 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L+ C +      G+  HA +    V  D  +  +L++MY  CGD ++   V  ++   D
Sbjct: 117 ILNACGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPD 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + S N +++GYA+N     A + FL+L G+ + +P+ YT++ +++   + SA   GK LH
Sbjct: 177 LVSWNSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLH 236

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           AQ +K+       +   LL+MY+K G +E AE VF  +  ++V+ WT +I G  + G  E
Sbjct: 237 AQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGE 296

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             ++L  +M  +G   + +  + AL++CA L   + G M H Q +KRG      V  ++V
Sbjct: 297 SAIKLFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLV 356

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
            MY+  G++  A+    ++  +     WN+ + G+ ++   EEA+  F++++ N    D+
Sbjct: 357 HMYAKNGDLHAARSIFSQV-SNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQ 415

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T+ S+L ACS    +   + + S I K+         S ++   ++ G  ++AE +  +
Sbjct: 416 VTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIK 475

Query: 482 LT 483
            T
Sbjct: 476 ST 477



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 126/227 (55%), Gaps = 6/227 (2%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   G+ PN  TF+ +L +C  L +  MG + H Q +K G     FV T+++ MYS  G+
Sbjct: 1   MGTQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGD 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           +  A K    + +   +V WN+ I G  +N+K EE +  F +MVR+     EFTYS IL 
Sbjct: 61  LESANKVFGCVVQK-DAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILN 119

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC  L      + IH++++     +++ + ++L++ Y  CG  E    VF+++   D+VS
Sbjct: 120 ACGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVS 179

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGI---RPTNSTFLAVLSACS 533
           WNSMI  Y++NG    A+ LF ++V  G+   +P   TF AV+SA S
Sbjct: 180 WNSMISGYAENGEGADAMNLFLQLV--GVFLPKPDEYTFAAVISATS 224


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 275/483 (56%), Gaps = 12/483 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L+  Y+K G +E A  +F+ +  RNV +W A++ G    G  E+ L     MR +G+ 
Sbjct: 112 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 171

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+EY        CA LR+   G   HA V++ G+     VG+++  MY   G + + +  
Sbjct: 172 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 231

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L+ +  S + VS N  I+G  +N   E A+E F  M       +  T+ S + +CS L +
Sbjct: 232 LRAL-PSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAA 290

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           LA  +QIH+  +K+  +  V V +SL+  Y++CG   D+ERV  + +  D+V  ++MI A
Sbjct: 291 LAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISA 350

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +G  +KA+ LF++M+  G  P   TFL +L ACSHSGL  +G   FE M K YG+ P
Sbjct: 351 YGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQP 410

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L  A   I ++P++P   IW+ L +AC+      MAE I++++
Sbjct: 411 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERV 470

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           +ELDP D+A YV LSN+ A +    D  + R+ M+ + + KEPG SW+E+  +I++F + 
Sbjct: 471 IELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTG 530

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLI 725
           ++SHS   ++ E L+++M +I   G+            D EKE  + +HSE+LA+ F  +
Sbjct: 531 DESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFL 590

Query: 726 SLP 728
           SLP
Sbjct: 591 SLP 593



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 193/399 (48%), Gaps = 10/399 (2%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+  Y K GD+++   +  +MP  ++A+ N ++AG   + L +++  FF  +    +QP+
Sbjct: 114 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 173

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            Y   ++   C  L  +  G+Q+HA  ++        V ++L  MY++CG + D E+   
Sbjct: 174 EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 233

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L   N++S    I+G  Q+GD E  L   CLMR  G++ N  TF  A+ SC+ L     
Sbjct: 234 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 293

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA  IK G+     V T++V MYS  G + ++++   E       V  +A I+ + 
Sbjct: 294 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEY-SGTDLVLCSAMISAYG 352

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFES 454
            +   ++A+  F QM+   A  +E T+ ++L ACS   L      C ++ ++      + 
Sbjct: 353 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY--GLQP 410

Query: 455 NVHVGSSLIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           +V   + +++   + G   +AE  + S     D V W +++ A     +   A  + E+ 
Sbjct: 411 SVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER- 469

Query: 514 VVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKE 551
           V+E + P +S    +LS   + S   +D  KV E+M ++
Sbjct: 470 VIE-LDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQ 507



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 207/501 (41%), Gaps = 80/501 (15%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           GR+ HA + ++ +  D  V +SL +MY +CG ++   A ++ +P L+I SCN  ++G  +
Sbjct: 193 GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQ 252

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   + A  FF  + G  V+ N  T+ + +  C  L+A+ +G+Q+HA  +K        V
Sbjct: 253 NGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPV 312

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             +L+ MY +CG + D+E V       +++  +A+I+ +  HG  +K + L   M   G 
Sbjct: 313 MTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGA 372

Query: 316 DPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           +PNE TF   L +C  + L++  M   F       G+       T IVD+    G + EA
Sbjct: 373 EPNEVTFLTLLYACSHSGLKDEGMN-CFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEA 431

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +  +  M      V W                                    ++L AC  
Sbjct: 432 EDLILSMPVQPDGVIWK-----------------------------------TLLSACKT 456

Query: 434 LPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADV----- 487
                  E+I  R+++    +S  +V  S I A +    WED  +V   +   +V     
Sbjct: 457 QKKFDMAERIAERVIELDPHDSASYVLLSNIRATSS--RWEDVSKVRETMREQNVRKEPG 514

Query: 488 VSWNSMIKAYSQ-------NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           VSW  +     Q       + R R+ +   E+M+   IR                G   D
Sbjct: 515 VSWVELKGQIHQFCTGDESHSRQREIVECLEEMMTR-IR--------------QCGYAPD 559

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
              VF  M  E     +E      V L   + KL IA  F+S LP      + + L    
Sbjct: 560 MSMVFHDMEDE----EKE------VSLAHHSEKLAIAFAFLS-LPEGVPIRVMKNLRVCD 608

Query: 601 RCHSDLK-MAEFISKQILELD 620
            CH  +K M++ I ++I+  D
Sbjct: 609 DCHVAIKLMSKVIGREIVVRD 629



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 8/212 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  ++ CS    L  G++ HAL  KT V     V  SLV+MY++CG +     V  +   
Sbjct: 279 VSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG 338

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK-- 238
            D+  C+ +++ Y  +    +A   F ++     +PN  T+ T+L  C      DEG   
Sbjct: 339 TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNC 398

Query: 239 -QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
            +L  +T  LQ   K      ++ +  + G + +AE +   + VQ + + W  +++  K 
Sbjct: 399 FELMTKTYGLQPSVKH--YTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKT 456

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
              ++   R+   + E  +DP++    V L++
Sbjct: 457 QKKFDMAERIAERVIE--LDPHDSASYVLLSN 486



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 4/131 (3%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D FT + +L A + L    T   +  RI K     NV   + LI  Y K G  E A ++F
Sbjct: 76  DRFTANHLLLAYADLGDFPTARGLFERIPKR----NVMSWNILIGGYVKNGDLETARKLF 131

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
            ++ A +V +WN+M+   + +G   +++  F  M  EG++P      ++   C+    V 
Sbjct: 132 DEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVV 191

Query: 540 DGQKVFESMVK 550
            G++V   +V+
Sbjct: 192 SGRQVHAYVVR 202


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 183/595 (30%), Positives = 315/595 (52%), Gaps = 43/595 (7%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V   +P   +   N ++ GY++        S +L +   +++P+ +T+  +L       A
Sbjct: 63  VFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMA 122

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +  GK L    +K  + S   V  A + M+  C +++ A  VF+      V++W  +++G
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN----SHMGYMFHAQVIKRG 349
           + +   ++K   L   M + G+ PN  T  + L++C+ L++     H+    +  +++R 
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERN 242

Query: 350 MALGDFV---------------------------GTAIVDMYSGLGEIWEAKKQLKEMGK 382
           + L + +                            T+IV  ++ +G+I  A+K   ++ +
Sbjct: 243 LILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE 302

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
               VSW A I G+ R  +  EA+  F +M  ++   DEFT  SIL AC+ L +L   E 
Sbjct: 303 R-DYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEW 361

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           + + I K+  +++  VG++LI+ Y KCG+   A++VF ++   D  +W +MI   + NG 
Sbjct: 362 VKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGH 421

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
             +A+ +F  M+   I P   T++ VL AC+H+G+V+ GQ  F SM  ++GI P   HY 
Sbjct: 422 GEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYG 481

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD 622
           CMVDLLGRAG+LE A   I N+P+KP + +W  L  ACR H ++++AE  +KQILEL+P+
Sbjct: 482 CMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPE 541

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
           + AVYV L N+YA      +  + RKLM  + I K PGCS +E+   +Y F + ++SH +
Sbjct: 542 NGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQ 601

Query: 683 MPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
             ++Y KL+ +MQ +   G++           + +KE  +  HSE+LA+ + LIS
Sbjct: 602 SKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALIS 656



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 189/438 (43%), Gaps = 42/438 (9%)

Query: 128 SREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           +R   L+ G+       K     + FV  + ++M++ C  +     V       ++ + N
Sbjct: 118 TRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWN 177

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
            +L+GY +   F ++   F++++   V PN  T   ML+ C  L  ++ GK ++      
Sbjct: 178 IMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGG 237

Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG--------- 298
                  + N L+ M+  CG M++A+SVF+ +  R+VISWT+I+ GF   G         
Sbjct: 238 IVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYF 297

Query: 299 ------DY-------EKPLRL------VCLMRE---DGIDPNEYTFTVALASCASLRNSH 336
                 DY       +  LR+      + L RE     + P+E+T    L +CA L    
Sbjct: 298 DQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALE 357

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G      + K  +    FVG A++DMY   G + +AKK  KEM       +W A I G 
Sbjct: 358 LGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-HHKDKFTWTAMIVGL 416

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH-SRIVKSKFESN 455
             N   EEA+  FS M+      DE TY  +L AC+    +   +    S  ++   + N
Sbjct: 417 AINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPN 476

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFE--- 511
           V     +++   + G  E+A  V   +    + + W S++ A     R  K + L E   
Sbjct: 477 VTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGA----CRVHKNVQLAEMAA 532

Query: 512 KMVVEGIRPTNSTFLAVL 529
           K ++E + P N     +L
Sbjct: 533 KQILE-LEPENGAVYVLL 549



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 160/355 (45%), Gaps = 37/355 (10%)

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI--KCGMMEDAESVFEGLV 280
           ++L  C S+  +   KQ+H+ T+K+   S       ++      + G M  A  VF+ + 
Sbjct: 12  SLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           Q  +  W  +I G+ +    +  + +  LM    I P+ +TF   L           G +
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
                +K G     FV  A + M+S L  + +  +++ +MG +   V+WN  ++G+ R +
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFS-LCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + +++   F +M +   + +  T   +L ACS L  L   + I+  I     E N+ + +
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR---ARK------------ 505
            LI+ +  CG  ++A+ VF  +   DV+SW S++  ++  G+   ARK            
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307

Query: 506 ----------------AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
                           A+ LF +M +  ++P   T +++L+AC+H G ++ G+ V
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 163/390 (41%), Gaps = 66/390 (16%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG------------- 166
           ++ +LS CS+ + LE G+  +  I    V  +  +   L++M+A CG             
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270

Query: 167 --DIKSMVAVVK----------------QMPYLDIASCNCLLAGYAKNALFDQAFSFFLK 208
             D+ S  ++V                 Q+P  D  S   ++ GY +   F +A + F +
Sbjct: 271 NRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFRE 330

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           +   +V+P+ +T  ++L  C  L A++ G+ +     K    + T V NAL+ MY KCG 
Sbjct: 331 MQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGN 390

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           +  A+ VF+ +  ++  +WTA+I G   +G  E+ L +   M E  I P+E T+   L +
Sbjct: 391 VGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCA 450

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C            HA ++++G +   F+   +                  + G   +   
Sbjct: 451 CT-----------HAGMVEKGQSF--FISMTM------------------QHGIKPNVTH 479

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           +   +    R  + EEA E    M       +   + S+L AC +  ++   E    +I+
Sbjct: 480 YGCMVDLLGRAGRLEEAHEVIVNM---PVKPNSIVWGSLLGACRVHKNVQLAEMAAKQIL 536

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           + + E N  V   L   Y  C  WE+  +V
Sbjct: 537 ELEPE-NGAVYVLLCNIYAACKRWENLRQV 565



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 4/189 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++ +L+ C+    LELG      I K ++  D FV  +L++MY KCG++     V 
Sbjct: 339 DEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVF 398

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           K+M + D  +   ++ G A N   ++A + F  +    + P+  TY  +L  C     ++
Sbjct: 399 KEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVE 458

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           +G+     +M +Q+  K  V++   ++ +  + G +E+A  V   + V+ N I W +++ 
Sbjct: 459 KGQSFFI-SMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLG 517

Query: 293 GFKQHGDYE 301
             + H + +
Sbjct: 518 ACRVHKNVQ 526



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 5/128 (3%)

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE--AYNKCGSWEDAERVFSQLT 483
           S+L+ C    S+   +QIHS  +K    S+      +I     ++ G    A +VF  + 
Sbjct: 12  SLLEKCK---SMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
              +  WN+MIK YS+    +  + ++  M+   I+P   TF  +L   + +  +Q G+ 
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 544 VFESMVKE 551
           +    VK 
Sbjct: 129 LLNHAVKH 136


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 307/594 (51%), Gaps = 4/594 (0%)

Query: 137 RRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           R+ HA    T  +  D  +  +L++MYAKCGDI     V  Q    D+A CN +++ Y +
Sbjct: 202 RKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQ 261

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
                 A S F ++    +QPN  TY+ +   C +     + +  H   +  +      V
Sbjct: 262 LGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVV 321

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           + AL++MY +CG +EDA  VF+ +  +NV++W  +I G+ Q G  ++ L+L   M   G+
Sbjct: 322 NTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGV 381

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           +P+E TF   L SC+   +   G   H  V+  G      V +A++ MYS  G + +A  
Sbjct: 382 EPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVD 441

Query: 376 QL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              K +   +S +SW A +    RN +   A+  F +M       +  T+ S + ACS +
Sbjct: 442 VFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSI 501

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L     I  R++ +    +V +G+SLI  Y KCG  + A  VF  L+  ++V+WN+++
Sbjct: 502 GALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTIL 561

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
            A SQNG    +  L ++M ++G +P   T L +L  CSH+GLV      F SMV  + +
Sbjct: 562 AASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCL 621

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
           +P   HY C+VDLLGR+G+LE    FIS+ P    + +W  L  +C  HSD++     ++
Sbjct: 622 VPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRAAR 681

Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           ++L LDP +A+ YV LSNM+A  G+    +   KL   + + KE   S+IEV   ++ F 
Sbjct: 682 RVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYIEVNGVVHEFG 741

Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLP 728
            +   H    K+  +L++  +++E+ G       D   YH E+LA+ FG IS P
Sbjct: 742 VRAGLHRLGEKIGAQLREWSEEMEEAGFV--PLHDVRGYHDEKLAIAFGAISSP 793



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 250/492 (50%), Gaps = 18/492 (3%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           GD+ +   +V  Y KCG +K    V   + + ++ S   LLA YA+N           ++
Sbjct: 114 GDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQM 173

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ---TMKLQYLSKTAVSNALLTMYIKC 266
           D + V PN  T +T++     L   DE +++HA+   T +L Y     +  AL+ MY KC
Sbjct: 174 DLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTY--DVVLVTALIDMYAKC 231

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G +  AE VF+    +++    A+I+ + Q G     +     ++  G+ PN+ T+ +  
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-GKSAS 385
            +CA+        + H   I   +     V TA+V MYS  G + +A++    M GK+  
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNV- 350

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            V+WN  IAG+ +   T+EA++ +  M       DE T+ ++L++CSL   LA    IH 
Sbjct: 351 -VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ--LTAADVVSWNSMIKAYSQNGRA 503
            +V + ++S++ V S+LI  Y+ CGS  DA  VF +   T + V+SW +M+ A ++NG  
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           R A+ LF KM +EG+R    TF++ + ACS  G + +G  +FE ++   G L +    + 
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVT-GHLIDVVLGTS 528

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL-ELDPD 622
           +++L G+ G+L+ AL     L  K     W  + AA    S     E +S ++L E+D D
Sbjct: 529 LINLYGKCGRLDYALEVFHYLSFKNIV-TWNTILAA----SSQNGEETLSDELLQEMDLD 583

Query: 623 DAAVY-VTLSNM 633
            A    +TL NM
Sbjct: 584 GAQPNEMTLLNM 595



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 169/402 (42%), Gaps = 19/402 (4%)

Query: 93  DGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQ 152
           +G+ D+     V +    +E   D+   + VL  CS  E L  GR  H  +         
Sbjct: 363 EGYTDEALQLYVSMEAAGVEP--DEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSL 420

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQ--MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
            V ++L+ MY+ CG +   V V  +    +  + S   +L    +N     A + F K+D
Sbjct: 421 TVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD 480

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V+ N  T+ + +  C S+ A+ EG  +  + +   +L    +  +L+ +Y KCG ++
Sbjct: 481 LEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLD 540

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VF  L  +N+++W  I+    Q+G+      L+  M  DG  PNE T    L  C 
Sbjct: 541 YALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGC- 599

Query: 331 SLRNSHMGYMFHAQVIKRGMALGD-FVGTA-----IVDMYSGLGEIWEAKKQLKEMGKSA 384
               SH G +  A    R M  G   V T+     +VD+    G++ E +  +     S 
Sbjct: 600 ----SHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSL 655

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA--ACDEFTYSSILKACSLLPSLATCEQ 442
            SV W + +     +   E  + A  +++  D   A      S++  A  +L ++ +  +
Sbjct: 656 DSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAK 715

Query: 443 IHSR--IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +     + K +  S + V   + E   + G     E++ +QL
Sbjct: 716 LAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQL 757



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVH 457
           ++  ++ + +  +  +     D   Y S+LK    + +L T   I + I  SK F  +  
Sbjct: 61  DEDVKQKLASLEEQNQKSGFVDPAAYVSLLKQSGDVTALKT---IQAHISHSKRFAGDRL 117

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           + + ++EAY KCG  +DA  VFS +   +V SW  ++ AY+QNG  +  + L  +M + G
Sbjct: 118 LLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLG 177

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           + P   T   V+ A S  G   + +K+         +  +    + ++D+  + G +
Sbjct: 178 VWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDI 234


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 195/619 (31%), Positives = 322/619 (52%), Gaps = 14/619 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS C   + L+ G+  H L  K  +  +  +  +L+++Y+  G  K    + ++MP  D
Sbjct: 267 LLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERD 326

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +LA Y ++     A   F ++  +  + N+ T+++ LA C        GK LH 
Sbjct: 327 LISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHG 386

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             + L    +  + N L+T Y KC  M +A+ VF+ + + + ++W A+I GF  + +  +
Sbjct: 387 FVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNE 446

Query: 303 PLRLVCLMREDGIDPNEY-TFTVALASCASLRN-SHMGYMFHAQVIKRGMALGDFVGTAI 360
            +    LMRE      +Y T    L SC +  +    G   HA  +  G  L   V +++
Sbjct: 447 AVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSL 506

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           + MY+  G++  +     ++    SSV WNA IA   R    EEA++   +M       D
Sbjct: 507 ITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARYGFGEEALKLVVRMRSAGIEFD 565

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
           +F +S+ L   + L  L   +Q+H   +K  FE +  + ++ ++ Y KCG  +DA R+  
Sbjct: 566 QFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILP 625

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           Q T    +SWN++I   +++G+  KA   F  M+  G++P + +F+ +LSACSH GLV +
Sbjct: 626 QPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDE 685

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   + SM   YGI P   H  CM+DLLGR+G+L  A  FI+ +PI P   +WR L A+C
Sbjct: 686 GLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASC 745

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R + +L +    +K +LELDP D + YV  SN++A  G   D E+ R  M   +I K+P 
Sbjct: 746 RIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPA 805

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE-KED 709
            SW++    I  F   +++H +M ++  KL  LM+ + + G+          TD E KE 
Sbjct: 806 HSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEH 865

Query: 710 RVLYHSERLAVGFGLISLP 728
            +  HSER+A+ FGLI++P
Sbjct: 866 NMWSHSERIALAFGLINIP 884



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 221/474 (46%), Gaps = 5/474 (1%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY+K G I     V  +M   + AS N +++GY +   + +A  FF  + GI ++P+ + 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 221 YSTMLAICGSLSAI-DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
            ++++  C   S +  EG Q H   +K   +    V  + +  Y   G++ +A+ +F  +
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RNV+SWT+++  +  +G  ++ +     MR +GI  NE    + ++SC  L +  +G+
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
                 +K G+        +++ M+ G G+I EA     EM +   ++SWN+ I+   +N
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNER-DTISWNSIISANAQN 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              EE+   F  M       +  T S +L  C  +  L   + +H   VK   ESN+ + 
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           ++L+  Y+  G  +DAE +F ++   D++SWNSM+  Y Q+GR   A+ +F +M+     
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               TF + L+AC       +G K+    V   G+  E    + ++   G+  K+  A  
Sbjct: 360 INYVTFTSALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKK 418

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
               +P K     W  L      +++L  A    K + E        Y+T+ N+
Sbjct: 419 VFQRMP-KLDKVTWNALIGGFANNAELNEAVAAFKLMRE-GSTSGVDYITIVNI 470



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 223/468 (47%), Gaps = 9/468 (1%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G ++H    K  +  D FV  S V+ YA  G + +   +  +MP  ++ S   L+  Y+ 
Sbjct: 78  GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSD 137

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N    +  + + ++    +  N    + +++ CG L  I  G QL    +K    +K + 
Sbjct: 138 NGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSA 197

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
           +N+L+ M+  CG + +A S+F  + +R+ ISW +II+   Q+  +E+  R    MR    
Sbjct: 198 ANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHE 257

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N  T ++ L+ C S+     G   H   +K G+     +   ++ +YS  G   +A+ 
Sbjct: 258 EINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAEL 317

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             + M +    +SWN+ +A + ++ +   A++ F++M+      +  T++S L AC L P
Sbjct: 318 IFRRMPER-DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAAC-LDP 375

Query: 436 SLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
              T  +I H  +V    +  + +G++LI  Y KC    +A++VF ++   D V+WN++I
Sbjct: 376 EFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALI 435

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSAC-SHSGLVQDGQKVFESMVKE 551
             ++ N    +A+  F K++ EG        T + +L +C +H  L++ G  +    V  
Sbjct: 436 GGFANNAELNEAVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVT 494

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G   ++   S ++ +  + G L  +      L  K T+ +W  + AA
Sbjct: 495 -GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFK-TSSVWNAIIAA 540


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 195/602 (32%), Positives = 316/602 (52%), Gaps = 53/602 (8%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           MP  D+ S N +L+GYA+N   D+A   F K+       N  +++ +LA       + E 
Sbjct: 134 MPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLKEA 189

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           ++L       + +S     N L+  Y+K  M+ DA  +F+ +  R+VISW  +I+G+ Q 
Sbjct: 190 RRLFESQSNWELIS----WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQV 245

Query: 298 GDY--------EKPLR-------LVCLMREDG-ID-----------PNEYTFTVALASCA 330
           GD         E P+R       +V    ++G +D            NE ++   LA   
Sbjct: 246 GDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYV 305

Query: 331 SLRNSHM-GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
             +   + G +F A   +   +        ++  Y   G I +A+K L +M      VSW
Sbjct: 306 QYKKMVIAGELFEAMPCRNISSW-----NTMITGYGQNGGIAQARK-LFDMMPQRDCVSW 359

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
            A I+G+ +N   EEA+  F +M R+  + +  T+S  L  C+ + +L   +Q+H ++VK
Sbjct: 360 AAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
           + FE+   VG++L+  Y KCGS ++A  VF  +   DVVSWN+MI  Y+++G  R+A++L
Sbjct: 420 AGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVL 479

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           FE M   G++P   T + VLSACSHSGL+  G + F SM ++Y + P   HY+CM+DLLG
Sbjct: 480 FESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLG 539

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           RAG+LE A   + N+P  P A  W  L  A R H + ++ E  ++ + +++P ++ +YV 
Sbjct: 540 RAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVL 599

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN+YA +G   D  + R  M+   + K  G SW+EV NKI+ F   +  H E  ++Y  
Sbjct: 600 LSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAF 659

Query: 690 LKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRT 738
           L++L  ++   G+            + EKE  + YHSE+LAV FG++++PA       + 
Sbjct: 660 LEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKN 719

Query: 739 LE 740
           L 
Sbjct: 720 LR 721



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 140/587 (23%), Positives = 244/587 (41%), Gaps = 104/587 (17%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
           SA ++FN  P+R+ +S + +I +GY+   +  ++R+ +    D  P+    D  S  V +
Sbjct: 64  SALRVFNSMPRRSSVSYNAMI-SGYLRNAKFSLARDLF----DKMPE---RDLFSWNVML 115

Query: 107 TCY----------SLESLLDKQFVIE---VLSYCSREECLELGRR-YHALITKTAVCGDQ 152
           T Y           L  L+ K+ V+    +LS  ++   ++  R  ++ +  + ++  + 
Sbjct: 116 TGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNG 175

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
            + A     Y   G +K    + +     ++ S NCL+ GY K  +   A   F ++   
Sbjct: 176 LLAA-----YVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR 230

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS---------------- 256
           DV     +++TM++    +  + + K+L  ++      + TA+                 
Sbjct: 231 DV----ISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYF 286

Query: 257 -----------NALLTMYIKCGMMEDAESVFEGLVQRNV--------------------- 284
                      NA+L  Y++   M  A  +FE +  RN+                     
Sbjct: 287 DEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARK 346

Query: 285 ----------ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
                     +SW AII+G+ Q+G YE+ L +   M+ DG   N  TF+ AL++CA +  
Sbjct: 347 LFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAA 406

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +G   H QV+K G   G FVG A++ MY   G   EA    + + +    VSWN  IA
Sbjct: 407 LELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGI-EEKDVVSWNTMIA 465

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL--LPSLATCEQIHSRIVKSKF 452
           G+ R+    +A+  F  M +     DE T   +L ACS   L    T E  +S       
Sbjct: 466 GYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGT-EYFYSMDRDYNV 524

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGR---ARKAII 508
           +      + +I+   + G  E+AE +   +       SW +++ A   +G      KA  
Sbjct: 525 KPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAE 584

Query: 509 LFEKMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGI 554
           +  KM      P NS    +LS   + SG   D  K+  S ++E G+
Sbjct: 585 MVFKM-----EPQNSGMYVLLSNLYAASGRWVDVGKM-RSKMREAGV 625



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/334 (19%), Positives = 135/334 (40%), Gaps = 45/334 (13%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           K    V+WN  I+   RN   + A+  F+ M R  +       S  L+      +    +
Sbjct: 42  KDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFD 101

Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           ++  R +   F  NV     ++  Y +     +A ++F  +   DVVSWN+M+  Y+QNG
Sbjct: 102 KMPERDL---FSWNV-----MLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG 153

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
              +A  +F KM        + ++  +L+A  H+G +++ +++FES         E   +
Sbjct: 154 FVDEAREVFNKMP----HRNSISWNGLLAAYVHNGRLKEARRLFESQSNW-----ELISW 204

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
           +C++    +   L  A      +P++     W  + +      DL  A    K++    P
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPVRDVIS-WNTMISGYAQVGDLSQA----KRLFNESP 259

Query: 622 -DDAAVYVTLSNMYAEAGLQADAE----------------------EQRKLMKMKEISKE 658
             D   +  + + Y + G+  +A                       + +K++   E+ + 
Sbjct: 260 IRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEA 319

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
             C  I  +N +   + QN   ++  K+++ + Q
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQ 353


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 191/591 (32%), Positives = 314/591 (53%), Gaps = 14/591 (2%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F    L++ Y KC  I     +  +MP   I + N +++ +       +A   +  +   
Sbjct: 36  FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE 95

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMED 271
            V P+ YT+S +      +    EG++ H   + L + +S   V+  ++ MY K G M+D
Sbjct: 96  GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKD 155

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  VF+ ++ ++V+ +TA+I G+ Q G   + L +   M    I PNEYT    L SC +
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L +   G + H  V+K G+       T+++ MYS    + ++ K    +   AS V+W +
Sbjct: 216 LGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA-YASHVTWTS 274

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I G  +N + E A+  F +M+R   + + FT+SSIL ACS L  L   EQIH+  VK  
Sbjct: 275 FIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLG 334

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
            + N +V ++LI  Y KCG+ E A  VF  LT  DVVS N+MI AY+QNG   +A+ LFE
Sbjct: 335 VDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFE 394

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
           +M   G +P   TF+++L AC+++GLV++G ++F  +   + I     HY+CM+DLLGRA
Sbjct: 395 RMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 454

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
            + E A + I      P    WR L  AC+ H +++MAE   K++L+  P D   ++ L+
Sbjct: 455 KRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLT 513

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           N+YA AG   +  E +   +   + K P  SW+++  +++ F + + SH    ++ E L 
Sbjct: 514 NIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLH 573

Query: 692 QLMQQIEDIGHT--------DNEKEDRV---LYHSERLAVGFGLISLPAKN 731
           +L++++  +G+         D E+E ++    YHSE+LA+ F L     KN
Sbjct: 574 ELIEKVITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKN 624



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 183/393 (46%), Gaps = 3/393 (0%)

Query: 136 GRRYHALITKTAV-CGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           G++ H L         D FV   +V+MYAK G +K    V  ++   D+     L+ GY 
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYN 179

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +  L  +A   F  + G  ++PN YT +++L  CG+L  +  GK +H   +K    S  A
Sbjct: 180 QRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVA 239

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
              +LLTMY KC M+ED+  VF  L   + ++WT+ I G  Q+G  E  L +   M    
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCS 299

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           I PN +TF+  L +C+SL     G   HA  +K G+    +V  A++ +Y   G + +A+
Sbjct: 300 ISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKAR 359

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
              + +      VS N  I  + +N    EA+E F +M +     +  T+ SIL AC+  
Sbjct: 360 SVFESL-TELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNA 418

Query: 435 PSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             +    QI S I  +   E      + +I+   +   +E+A  +  +    DV+ W ++
Sbjct: 419 GLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTL 478

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           + A   +G    A    +KM+ +  R   +  L
Sbjct: 479 LNACKIHGEVEMAEKFMKKMLDQAPRDGGTHIL 511



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 106/207 (51%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  G+  H L+ K+ +        SL+ MY+KC  ++  + V   + Y  
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +    + G  +N   + A S F ++    + PNH+T+S++L  C SL+ ++ G+Q+HA
Sbjct: 269 HVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHA 328

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            T+KL       V  AL+ +Y KCG +E A SVFE L + +V+S   +I  + Q+G   +
Sbjct: 329 VTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHE 388

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASC 329
            L L   M++ G  PN  TF   L +C
Sbjct: 389 ALELFERMKKLGHKPNVVTFISILLAC 415



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 48/389 (12%)

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  ++K G +L  F G  ++D Y     I EA+K   EM  +   V+WN+ I+      
Sbjct: 23  LHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEM-PNRHIVTWNSMISSHVSRG 80

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVG 459
           KT+EAIE +  M+      D +T+S+I KA S +      ++ H   V   FE S+  V 
Sbjct: 81  KTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVA 140

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + +++ Y K G  +DA  VF ++   DVV + ++I  Y+Q G   +A+ +FE MV   I+
Sbjct: 141 TGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIK 200

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKV----------------------------FESMVKE 551
           P   T  +VL +C + G + +G+ +                             E  +K 
Sbjct: 201 PNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKV 260

Query: 552 YGILPEEAHYSCMVDLLG--RAGKLEIALIFISNL---PIKPTAPIWRPLFAACRCHSDL 606
           +  L   +H +    ++G  + G+ EIAL     +    I P    +  +  AC   + L
Sbjct: 261 FNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAML 320

Query: 607 KMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMK-MKEISKEPGCSWI 664
           +  E I    ++L  D +  V   L ++Y + G   + E+ R + + + E+        +
Sbjct: 321 EAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCG---NVEKARSVFESLTELDV------V 371

Query: 665 EVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
            +   IY  ++QN    E  +++E++K+L
Sbjct: 372 SINTMIYA-YAQNGFGHEALELFERMKKL 399



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           Y+S++   +   SL T + +H+ I+KS    +   G  LI+ Y KC    +A ++F ++ 
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSF-FGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
              +V+WNSMI ++   G+ ++AI L++ M+ EG+ P   TF A+  A S  G+ ++GQK
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 288/494 (58%), Gaps = 12/494 (2%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L+  +++ G ++ A  VF+ +++RNV +W A+++G  Q    E  L L   M E G  
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+E+T    L  CA LR S+ G   HA V+K G      VG+++  MY   G + E +K 
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           +K M +  + V+WN  IAG  +N   E  ++ ++ M  +    D+ T  S++ + + L +
Sbjct: 147 IKAM-RIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELAT 205

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L   +QIH+  +K+   S V V SSLI  Y+KCG  ED+ +        D V W+SMI A
Sbjct: 206 LFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAA 265

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +GR  +A+ LFE+M  EG+   + TFL++L ACSH+GL + G   F+ MV++YG+ P
Sbjct: 266 YGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKP 325

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              HY+C+VDLLGR+G L+ A   I ++P++    IW+ L +ACR H +  MA   +++I
Sbjct: 326 RLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEI 385

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
           L L+P D+A YV LSN++A A    D  + R  M+ + + KEPG SW+EV N++++F   
Sbjct: 386 LRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMG 445

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGH----------TDN-EKEDRVLYHSERLAVGFGLI 725
           +KSH    ++   LK+LM++++  G+          TD+ EKE+ ++ HSE+LA+ FGL+
Sbjct: 446 DKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLM 505

Query: 726 SLPAKNKFECSRTL 739
           ++P  +     + L
Sbjct: 506 NIPPGSPIRVMKNL 519



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 183/375 (48%), Gaps = 5/375 (1%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+N + + GD+ S + V  +M   ++A+ N +++G  +    +     F ++  +   P+
Sbjct: 29  LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +T  ++L  C  L A   GKQ+HA  +K  Y     V ++L  MY+K G + + E V +
Sbjct: 89  EFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIK 148

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            +  RNV++W  +I G  Q+G +E  L L  +M+  G+ P++ T    ++S A L     
Sbjct: 149 AMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQ 208

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           G   HA+ IK G      V ++++ MYS  G + ++ K L +  +   SV W++ IA + 
Sbjct: 209 GQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDC-EHPDSVLWSSMIAAYG 267

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-KSKFESNV 456
            + + EEA+  F QM +     ++ T+ S+L ACS              +V K   +  +
Sbjct: 268 FHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRL 327

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
              + +++   + G  ++AE +   +   ADVV W +++ A   +  A  A    E+++ 
Sbjct: 328 EHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEIL- 386

Query: 516 EGIRPTNSTFLAVLS 530
             + P +S    +LS
Sbjct: 387 -RLNPQDSATYVLLS 400



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 152/310 (49%), Gaps = 7/310 (2%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           + L  L D+  +  VL  C+       G++ HA + K     +  V +SL +MY K G +
Sbjct: 81  HELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSL 140

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLA 226
                V+K M   ++ + N L+AG A+N  F+     +  +K+ G+  +P+  T  ++++
Sbjct: 141 GEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGL--RPDKITLVSVIS 198

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
               L+ + +G+Q+HA+ +K    S  AV ++L++MY KCG +ED+          + + 
Sbjct: 199 SSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVL 258

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA--SLRNSHMGYMFHAQ 344
           W+++I  +  HG  E+ + L   M ++G+  N+ TF   L +C+   L+   MG+ F   
Sbjct: 259 WSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGF-FKLM 317

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           V K G+       T +VD+    G + EA+  ++ M   A  V W   ++    ++  + 
Sbjct: 318 VEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADM 377

Query: 405 AIEAFSQMVR 414
           A     +++R
Sbjct: 378 ATRTAEEILR 387



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           N+   + LI  + + G  + A +VF ++   +V +WN+M+    Q       + LF +M 
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
             G  P   T  +VL  C+       G++V   ++K YG
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLK-YG 119


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 179/531 (33%), Positives = 286/531 (53%), Gaps = 15/531 (2%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y + L  C +L+ +   +Q+HAQ      L    V+N L+  Y     ++DA  +F+G+ 
Sbjct: 65  YISALVNCRNLTQV---RQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC 121

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+ +SW+ ++ GF + GDY         +   G  P+ YT    + +C  L+N  MG +
Sbjct: 122 VRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRL 181

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  V K G+ L  FV  A+VDMY    EI +A+    +M +    V+W   I G+    
Sbjct: 182 IHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKM-QERDLVTWTVMIGGYAECG 240

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           K  E++  F +M       D+    +++ AC+ L ++     I   I + KF+ +V +G+
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 300

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           ++I+ Y KCG  E A  +F ++   +V+SW++MI AY  +G+ RKA+ LF  M+  G+ P
Sbjct: 301 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLP 360

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              T  ++L ACSH+GLV++G + F SM ++Y +  +  HY+C+VDLLGRAG+L+ AL  
Sbjct: 361 DKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKL 420

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I ++ I+    +W     ACR H D+ +AE  +  +LEL   +   YV LSN+YA AG  
Sbjct: 421 IKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRW 480

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            D  + R LM  + + K PG +WIEV NK ++F   + +H    ++YE LK L  ++E +
Sbjct: 481 EDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLSNKLELV 540

Query: 701 GH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           G+           D E +  +LY HSE+LA+ FGLI+ P        + L 
Sbjct: 541 GYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 171/514 (33%), Positives = 276/514 (53%), Gaps = 12/514 (2%)

Query: 238  KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            +Q+H Q      L    V+N L+  Y     ++DA  +F+G+  R+ +SW+ ++ GF + 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 298  GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            GDY         +   G  P+ YT    + +C  L+N  MG + H  V K G+ L  FV 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 358  TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             A+VDMY    EI +A+    +M +    V+W   I G+       E++  F +M     
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXER-DLVTWTVMIGGYAECGNANESLVLFDKMREEGV 933

Query: 418  ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
              D+    +++ AC+ L ++     I   I + KF+ +V +G+++I+ + KCG  E A  
Sbjct: 934  VPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESARE 993

Query: 478  VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            +F ++   +V+SW++MI AY  +G+ RKA+ LF  M+  GI P   T +++L ACSH+GL
Sbjct: 994  IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGL 1053

Query: 538  VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
            V++G + F  M ++Y +  +  HY+C+VDLLGRAG+L+ AL  I ++  +    +W    
Sbjct: 1054 VEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFL 1113

Query: 598  AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
             ACR H D+ +AE  +  +LEL P +   Y+ LSN+YA AG   D  + R LM  + + K
Sbjct: 1114 GACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKK 1173

Query: 658  EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEK 707
             PG +WIEV NK ++F   + +H    ++YE LK L  ++E +G+           D E 
Sbjct: 1174 IPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEEL 1233

Query: 708  EDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
            +  +LY HSE+LA+ FGLI+ P        + L 
Sbjct: 1234 KIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 1267



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 205/461 (44%), Gaps = 39/461 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L+ +F I  L  C     L   R+ HA  +   +  +  V   L+  Y+    +     +
Sbjct: 60  LNPKFYISALVNCRN---LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGL 116

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
              M   D  S + ++ G+AK   +   F  F +L     +P++YT   ++  C  L  +
Sbjct: 117 FDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL 176

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+ +H    K        V  AL+ MY+KC  +EDA  +F+ + +R++++WT +I G+
Sbjct: 177 QMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGY 236

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            + G   + L L   MRE+G+ P++      + +CA L   H   +    + ++   L  
Sbjct: 237 AECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDV 296

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +GTA++DMY+  G + E+ +++ +  +  + +SW+A IA +  + +  +A++ F  M+ 
Sbjct: 297 ILGTAMIDMYAKCGCV-ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLS 355

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           +    D+ T +S+L ACS           H+ +V    E  +   SS+         WED
Sbjct: 356 SGMLPDKITLASLLYACS-----------HAGLV----EEGLRFFSSM---------WED 391

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
                      DV  +  ++    + GR  +A+ L + M +E        + A L AC  
Sbjct: 392 YS------VRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIE---KDEGLWGAFLGACRT 442

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
              V   +K   S+++     P   HY  + ++   AG+ E
Sbjct: 443 HKDVVLAEKAATSLLELQSQNP--GHYVLLSNIYANAGRWE 481



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/440 (23%), Positives = 194/440 (44%), Gaps = 38/440 (8%)

Query: 137  RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
            R+ H   +   +  +  V   LV  Y+    +     +   M   D  S + ++ G+AK 
Sbjct: 755  RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814

Query: 197  ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
              +   F  F +L     +P++YT   ++  C  L  +  G+ +H    K        V 
Sbjct: 815  GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874

Query: 257  NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
             AL+ MY KC  +EDA  +F+ + +R++++WT +I G+ + G+  + L L   MRE+G+ 
Sbjct: 875  AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVV 934

Query: 317  PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            P++      + +CA L   H        + ++   L   +GTA++DM++  G + E+ ++
Sbjct: 935  PDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV-ESARE 993

Query: 377  LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
            + +  +  + +SW+A IA +  + +  +A++ F  M+R+    ++ T  S+L ACS    
Sbjct: 994  IFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS---- 1049

Query: 437  LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
                   H+ +V    E  +   S +         WED           DV  +  ++  
Sbjct: 1050 -------HAGLV----EEGLRFFSXM---------WEDYS------VRXDVKHYTCVVDL 1083

Query: 497  YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
              + GR  +A+ L   M  E        + A L AC     V   +K   S+++   + P
Sbjct: 1084 LGRAGRLDEALKLIXSMTXE---KDEGLWGAFLGACRTHKDVXLAEKAATSLLE---LQP 1137

Query: 557  EE-AHYSCMVDLLGRAGKLE 575
            +   HY  + ++   AG+ E
Sbjct: 1138 QNPGHYILLSNIYANAGRWE 1157



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/372 (22%), Positives = 163/372 (43%), Gaps = 38/372 (10%)

Query: 123  VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
            V+  C   + L++GR  H ++ K  +  D FV A+LV+MY KC +I+    +  +M   D
Sbjct: 842  VIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERD 901

Query: 183  IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            + +   ++ GYA+    +++   F K+    V P+     T++  C  L A+ + + +  
Sbjct: 902  LVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 961

Query: 243  QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
               + ++     +  A++ M+ KCG +E A  +F+ + ++NVISW+A+I  +  HG   K
Sbjct: 962  YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 1021

Query: 303  PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             L L  +M   GI PN+ T    L +C+           HA +++ G+            
Sbjct: 1022 ALDLFPMMLRSGILPNKITLVSLLYACS-----------HAGLVEEGLRF---------- 1060

Query: 363  MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
             +S + E +  +  +K          +   +    R  + +EA++    M       DE 
Sbjct: 1061 -FSXMWEDYSVRXDVKH---------YTCVVDLLGRAGRLDEALKLIXSMTXEK---DEG 1107

Query: 423  TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV---F 479
             + + L AC     +   E+  + +++ + ++  H    L   Y   G WED  ++    
Sbjct: 1108 LWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHY-ILLSNIYANAGRWEDVAKIRDLM 1166

Query: 480  SQLTAADVVSWN 491
            SQ     +  W 
Sbjct: 1167 SQRRLKKIPGWT 1178


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 189/628 (30%), Positives = 326/628 (51%), Gaps = 51/628 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D F    ++  YA+   ++    +   MP  D+ S N +L+GY ++   D+A   F ++ 
Sbjct: 94  DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                 N  +++ +LA       ++E ++L       + +S     N L+  Y+K  M+ 
Sbjct: 154 ----HKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELIS----CNCLMGGYVKRNMLG 205

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDY--------EKPLR-------LVCLMREDGI 315
           DA  +F+ +  R++ISW  +I+G+ Q GD         E P+R       +V    +DG+
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGM 265

Query: 316 ------------DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
                          E ++ V +A  A  +   MG     ++    +   +     ++  
Sbjct: 266 LDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNI----MISG 321

Query: 364 YSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
           Y   G++ +A+  L +M     SVSW A IAG+ +N   EEA+    +M R+  + +  T
Sbjct: 322 YCQNGDLAQAR-NLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRST 380

Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
           +   L AC+ + +L   +Q+H ++V++ +E    VG++L+  Y KCG  ++A  VF  + 
Sbjct: 381 FCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQ 440

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
             D+VSWN+M+  Y+++G  R+A+ +FE M+  G++P   T + VLSACSH+GL   G +
Sbjct: 441 HKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTE 500

Query: 544 VFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
            F SM K+YGI P   HY+CM+DLLGRAG LE A   I N+P +P A  W  L  A R H
Sbjct: 501 YFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIH 560

Query: 604 SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSW 663
            ++++ E  ++ + +++P ++ +YV LSN+YA +G   D  + R  M+   + K PG SW
Sbjct: 561 GNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSW 620

Query: 664 IEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVL 712
           +EV NKI+ F   +  H E  ++Y  L++L  +++  G+            + EK+  + 
Sbjct: 621 VEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLK 680

Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
           YHSE+LAV FG++++P+       + L 
Sbjct: 681 YHSEKLAVAFGILTMPSGKPIRVMKNLR 708



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/397 (21%), Positives = 176/397 (44%), Gaps = 35/397 (8%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
           ++ + + G     + V   MP  +  S N +++GY +NA F  A   F K+   D+    
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDL---- 95

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL-SKTAVS-NALLTMYIKCGMMEDAESVF 276
           ++++ M      L+     ++L    M    +  K  VS NA+L+ Y++ G +++A  VF
Sbjct: 96  FSWNLM------LTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVF 149

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  +N ISW  ++  + + G  E+  RL            E      L SC  L   +
Sbjct: 150 DRMPHKNSISWNGLLAAYVRSGRLEEARRLF-----------ESKSDWELISCNCLMGGY 198

Query: 337 M--GYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           +    +  A+ +   + + D +    ++  Y+  G++ +A++  +E        +W A +
Sbjct: 199 VKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEE-SPVRDVFTWTAMV 257

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
             + ++   +EA   F +M +      E +Y+ ++   +    +    ++   +    F 
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQK----REMSYNVMIAGYAQYKRMDMGRELFEEM---PF- 309

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            N+   + +I  Y + G    A  +F  +   D VSW ++I  Y+QNG   +A+ +  +M
Sbjct: 310 PNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEM 369

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             +G     STF   LSAC+    ++ G++V   +V+
Sbjct: 370 KRDGESLNRSTFCCALSACADIAALELGKQVHGQVVR 406



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 2/180 (1%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           LS C+    LELG++ H  + +T       V  +LV MY KCG I     V + + + DI
Sbjct: 385 LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDI 444

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ-LHA 242
            S N +LAGYA++    QA + F  +    V+P+  T   +L+ C      D G +  H+
Sbjct: 445 VSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHS 504

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
                     +     ++ +  + G +E+A+++   +  + +  +W A++   + HG+ E
Sbjct: 505 MNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNME 564



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 9/118 (7%)

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +++I  Y +   +  A  +F ++   D+ SWN M+  Y++N R R A +LF+ M  + + 
Sbjct: 68  NAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVV 127

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
             N    A+LS    SG V + + VF+ M  +  I      ++ ++    R+G+LE A
Sbjct: 128 SWN----AMLSGYVRSGHVDEARDVFDRMPHKNSI-----SWNGLLAAYVRSGRLEEA 176


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 201/652 (30%), Positives = 334/652 (51%), Gaps = 54/652 (8%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK------ 169
           D      VL  C+    L LG   H  I +  +  D +   +L+NMY+K   +K      
Sbjct: 107 DHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQR 166

Query: 170 -SMVAVVKQMP--YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
                V+ +M      + + + L+    +     +AF++       DV            
Sbjct: 167 LGASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNY-------DVS----------- 208

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKT------AVSNALLTMYIKCGMMEDA-ESVFEGL 279
            C S       ++  AQ +++ Y  ++      A +       I   M  D+   +FE +
Sbjct: 209 -CRS-------REFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMM 260

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            +++++SW  II G  ++G Y + L +V  M    + P+ +T +  L   A   +   G 
Sbjct: 261 PEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGK 320

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H   I++G+    +V ++++DMY+    + ++ +    + +    +SWN+ IAG  +N
Sbjct: 321 EIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTER-DGISWNSIIAGCVQN 379

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              +E ++ F QM+        +++SSI+ AC+ L +L   +Q+H  I ++ F+ N+ + 
Sbjct: 380 GLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 439

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           SSL++ Y KCG+   A ++F ++   D+VSW +MI   + +G A  AI LFE+M  EGI 
Sbjct: 440 SSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIE 499

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P    F+AVL+ACSH+GLV +  K F SM  ++GI P   HY+ + DLLGRAG+LE A  
Sbjct: 500 PNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYD 559

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           FI  +PI PT  +W  L +ACR H ++ MAE ++ +ILE+DP +   Y+ L+N+Y+ A  
Sbjct: 560 FICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARR 619

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             +A + R  ++   I K P CSWIEV NK+Y F + ++SH    K+ E ++ LM+ +E 
Sbjct: 620 WKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEK 679

Query: 700 IG--------HTDNEKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            G        H D E+E +   V  HSERLA+ FG+I+ PA      ++ L 
Sbjct: 680 EGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLR 731



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 169/379 (44%), Gaps = 30/379 (7%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S+ +  + +QLHAQ +K Q  S     + LL++Y    ++ D+  +F  L     ++W +
Sbjct: 20  SIKSRSQAQQLHAQVLKFQ-ASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKS 78

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I  +  HG   K L     M   G+ P+   F   L +CA L + ++G   H  +I+ G
Sbjct: 79  VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQ-------LKEMGKSASSVSWNAQIAGFFRNQ-K 401
           +    + G A+++MYS L  + ++ +Q       L EM +   SV   + + G   NQ +
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG---NQGR 195

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
               IEAF+     D +C    + + +      P          R    + E+  ++G  
Sbjct: 196 KVSDIEAFNY----DVSCRSREFEAQVLEIDYKP----------RSEYREMEA-CNLGQQ 240

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
            I+  +   S +   ++F  +   D+VSWN++I   ++NG   + + +  +M    ++P 
Sbjct: 241 -IKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPD 299

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + T  +VL   + +  +  G+++    +++ G+  E    S ++D+  +  ++ +    +
Sbjct: 300 SFTLSSVLPLIAENVDISKGKEIHGCSIRQ-GLDAEVYVASSLIDMYAKCTRV-VDSYRV 357

Query: 582 SNLPIKPTAPIWRPLFAAC 600
             L  +     W  + A C
Sbjct: 358 FTLLTERDGISWNSIIAGC 376



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 3/114 (2%)

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA-YNKCGSWEDAERVF 479
           E   +S+L+    + S +  +Q+H++++K  F+++     SL+ + Y+      D+ R+F
Sbjct: 8   EALVNSLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLF 65

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           + L     ++W S+I+ Y+ +G   K++  F  M+  G+ P ++ F +VL AC+
Sbjct: 66  NTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 187/589 (31%), Positives = 313/589 (53%), Gaps = 4/589 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V   L  CS  + LELG+  H  + K  +  D FV ++L+ +Y+KCG +   V V 
Sbjct: 104 DNYTVSIALKSCSGLQKLELGKMIHGFLKKK-IDSDMFVGSALIELYSKCGQMNDAVKVF 162

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAI 234
            + P  D+     ++ GY +N   + A +FF ++  ++ V P+  T  +  + C  LS  
Sbjct: 163 TEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDF 222

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G+ +H    +  + +K  ++N++L +Y K G +  A ++F  +  +++ISW++++  +
Sbjct: 223 NLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACY 282

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G     L L   M +  I+ N  T   AL +CAS  N   G   H   +  G  L  
Sbjct: 283 ADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDI 342

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V TA++DMY        A +    M K    VSW    +G+       +++  F  M+ 
Sbjct: 343 TVSTALMDMYLKCFSPENAIELFNRMPKK-DVVSWAVLFSGYAEIGMAHKSLGVFCNMLS 401

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           N    D      IL A S L  +     +H+ + KS F++N  +G+SLIE Y KC S ++
Sbjct: 402 NGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDN 461

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACS 533
           A +VF  L   DVV+W+S+I AY  +G+  +A+ L  +M     ++P + TF+++LSACS
Sbjct: 462 ANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACS 521

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GL+++G K+F  MV EY ++P   HY  MVDLLGR G+L+ AL  I+N+P++    +W
Sbjct: 522 HAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVW 581

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  ACR H ++K+ E  +  +  LDP+ A  Y  LSN+Y       DA + R L+K  
Sbjct: 582 GALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKEN 641

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            + K  G S +E+ N+++ F + ++ H E  ++YE L++L  ++ + G+
Sbjct: 642 RLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDARMREEGY 690



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/533 (26%), Positives = 253/533 (47%), Gaps = 21/533 (3%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           +  ++++L  C  +  +    + H+   K  +  D FV   L  +YA+   +     + +
Sbjct: 4   RDLLVKLLETCCSKISIT---QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFE 60

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV---QPNHYTYSTMLAICGSLSA 233
           + P   +   N LL  Y     + +  S F +++   V   +P++YT S  L  C  L  
Sbjct: 61  ETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQK 120

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           ++ GK +H   +K +  S   V +AL+ +Y KCG M DA  VF    + +V+ WT+II G
Sbjct: 121 LELGKMIHG-FLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITG 179

Query: 294 FKQHGDYEKPL----RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           ++Q+G  E  L    R+V L   + + P+  T   A ++CA L + ++G   H  V +RG
Sbjct: 180 YEQNGSPELALAFFSRMVVL---EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRG 236

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                 +  +I+++Y   G I  A    +EM      +SW++ +A +  N     A+  F
Sbjct: 237 FDTKLCLANSILNLYGKTGSIRIAANLFREM-PYKDIISWSSMVACYADNGAETNALNLF 295

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           ++M+      +  T  S L+AC+   +L   +QIH   V   FE ++ V ++L++ Y KC
Sbjct: 296 NEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKC 355

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
            S E+A  +F+++   DVVSW  +   Y++ G A K++ +F  M+  G RP     + +L
Sbjct: 356 FSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKIL 415

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +A S  G+VQ       + V + G    E   + +++L  +   ++ A      L     
Sbjct: 416 AASSELGIVQQAL-CLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLR-HTD 473

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQI---LELDPDDAAVYVTLSNMYAEAGL 639
              W  + AA   H   + A  +S Q+    ++ P+D   +V++ +  + AGL
Sbjct: 474 VVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVT-FVSILSACSHAGL 525



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 165/398 (41%), Gaps = 32/398 (8%)

Query: 22  VVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISR 81
           V+EQV P               + ++  +  +   KR G  T   + N  +N+  K  S 
Sbjct: 198 VLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 257

Query: 82  NGYSTRNDSFPDGFIDDGCSNTVPVTCYS-----------LESLLDKQF------VIEVL 124
              +      P     D  S +  V CY+              ++DK+       VI  L
Sbjct: 258 RIAANLFREMP---YKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISAL 314

Query: 125 SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
             C+    LE G++ H L        D  V+ +L++MY KC   ++ + +  +MP  D+ 
Sbjct: 315 RACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVV 374

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S   L +GYA+  +  ++   F  +     +P+      +LA    L  + +   LHA  
Sbjct: 375 SWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFV 434

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
            K  + +   +  +L+ +Y KC  +++A  VF+GL   +V++W++II  +  HG  E+ L
Sbjct: 435 TKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEAL 494

Query: 305 RLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVG 357
           +L   M     + PN+ TF   L++C     SH G       MFH  V +  +       
Sbjct: 495 KLSHQMSNHSDVKPNDVTFVSILSAC-----SHAGLIEEGIKMFHVMVNEYQLMPNIEHY 549

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             +VD+   +GE+ +A   +  M   A    W A +  
Sbjct: 550 GIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGA 587


>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
 gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
          Length = 604

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 172/517 (33%), Positives = 288/517 (55%), Gaps = 8/517 (1%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  +L  CG    +  G++LHA+ +   +     ++N +L MY KCG MED    F  + 
Sbjct: 36  YLDLLLACGRSRNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSEMK 95

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +RN++SW A+I+ + Q+      + +   M  DGI P+  TFT  L + A         +
Sbjct: 96  RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   ++ G      V TA+++MYS +G I  A++   E+      VSW+  IA + +  
Sbjct: 156 VHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIK-DVVSWSNMIAAYAQTG 214

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
              EA+E F +M       +  T+ +++ AC L+  +     IH RI+++  ESN  +G+
Sbjct: 215 HGTEALEMFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRRIIEAGLESNTVLGT 274

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L+  Y KCG   +A+++F +LT  DVV W+++++AY+++G  R A+ LF  M  EG+RP
Sbjct: 275 ALLNMYGKCGGLPEAKKIFDKLTERDVVVWSAILEAYARHGHPRVALKLFTLMQQEGVRP 334

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TF+ VL AC H G V +G+  F S+V+++ + P   H  CM+D+LGRAGKLE A  F
Sbjct: 335 NDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLEEAESF 394

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I+ +P+K  A  W     +CR + DL+  +  ++++ E  P   A Y+TL++MY +AG+ 
Sbjct: 395 IARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASMYTDAGMP 454

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            +AE   +LM+ +   KEPG S I V  +++ F  +++ H +  ++Y  L  L  +  ++
Sbjct: 455 EEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDVLHARALEL 514

Query: 701 GHTDNEKE------DRVLYHSERLAVGFGLISLPAKN 731
           G+  + +       +R L HSERLA+ FG +S+P K 
Sbjct: 515 GYVPDTRPLLLGSVERKL-HSERLALAFGAMSVPGKR 550



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 207/439 (47%), Gaps = 22/439 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +++L  C R   L  GRR HA I  T      F+   ++ MY KCG ++ +     +M  
Sbjct: 37  LDLLLACGRSRNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSEMKR 96

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLK--LDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
            +I S N +++ YA+N     A   FL+  LDGI  QP++ T++++L            K
Sbjct: 97  RNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGI--QPSYVTFTSVLNAFAGPELHRWAK 154

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
            +H   +++ + S   V+ ALL MY K G ++ A  VF+ L  ++V+SW+ +I  + Q G
Sbjct: 155 LVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQTG 214

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L +   M  +GI  N  TF   + +C  +         H ++I+ G+     +GT
Sbjct: 215 HGTEALEMFHRMDAEGIQANVITFVAVVHACVLVARITDARTIHRRIIEAGLESNTVLGT 274

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A+++MY   G + EAKK   ++ +    V W+A +  + R+     A++ F+ M +    
Sbjct: 275 ALLNMYGKCGGLPEAKKIFDKLTER-DVVVWSAILEAYARHGHPRVALKLFTLMQQEGVR 333

Query: 419 CDEFTYSSILKAC---SLLPSLATCEQIH--SRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            ++ T+  +L+AC     +P      + H  S +   +     H    +++   + G  E
Sbjct: 334 PNDVTFVGVLEACCHGGFVPE----GRFHFASLVRDHELRPTAHHVHCMLDMLGRAGKLE 389

Query: 474 DAERVFSQLTAA-DVVSWNSMI---KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           +AE   +++    + ++W+  +   ++Y    R ++A     + V E +    + +L + 
Sbjct: 390 EAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRA----AEKVFEFLPHCRAGYLTLA 445

Query: 530 SACSHSGLVQDGQKVFESM 548
           S  + +G+ ++ + V   M
Sbjct: 446 SMYTDAGMPEEAEAVARLM 464


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 179/533 (33%), Positives = 294/533 (55%), Gaps = 33/533 (6%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           + Y   +  C    A+ EG+Q+HA+ +   Y     ++  L+ MY +CG +EDA +V +G
Sbjct: 36  HDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDG 95

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           + +RNV+SWTA+I+G+ Q+   ++   L  +M   GI                    H  
Sbjct: 96  MPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--------------------HQV 135

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              HA  +K    L  FVG++++DMY+    I EA++   +M  +   VS+ A ++G+ +
Sbjct: 136 KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVF-DMLPARDVVSYTAILSGYTQ 194

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
               EEA++ F  +      C++ T++++L A S L S+   +Q+H  I++ +    + +
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMAL 254

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +SLI+ Y+KCG    + RVF  +    VVSWN+M+  Y ++G A + + LF  M  E +
Sbjct: 255 QNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-V 313

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P + T LAVLS  SH GLV +G  +F+ +VKE   L    HY C++DLLGR+G+L+ AL
Sbjct: 314 KPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKAL 373

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I  +P +PT  IW  L  ACR H+++ + EF+++++L+++P++A  YV LSN+YA AG
Sbjct: 374 NLIEKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAG 433

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           +  D    RKLM  K + KEPG SW+ +   I+ F S  + H     +  K+K++   I+
Sbjct: 434 MWKDVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIK 493

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             G             D +KE  +L HSE+LA+ FGL+S P+    +  + L 
Sbjct: 494 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLR 546



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 207/489 (42%), Gaps = 75/489 (15%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           ++ HA   KT      FV +SL++MYAK  +I+    V   +P  D+ S   +L+GY + 
Sbjct: 136 KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQL 195

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
            L ++A   F  L    +Q N  T++ +L     LS++D GKQ+H   ++ +     A+ 
Sbjct: 196 GLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 255

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N+L+ MY KCG +  +  VF+ + +R+V+SW A++ G+ +HG   + ++L   M  D + 
Sbjct: 256 NSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVK 314

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P+  T    L+          GY  H  ++  G+ + D +                    
Sbjct: 315 PDSVTLLAVLS----------GYS-HGGLVDEGLDMFDHI-------------------- 343

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           +KE     ++  +   I    R+ + ++A+    +M           + S+L AC +  +
Sbjct: 344 VKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRA---IWGSLLGACRVHTN 400

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLI--EAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
           +   E +  +++  + E+    G+ +I    Y   G W+D  RV   +    V+      
Sbjct: 401 VHVGEFVAQKLLDIEPEN---AGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVI------ 451

Query: 495 KAYSQNGRARKAIILFEKMV-----VEGIRP----TNSTFLAVLSACSHSGLVQDGQKVF 545
               + GR   + ++ +K++      E   P     N+    +  A   +G V D   V 
Sbjct: 452 ---KEPGR---SWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVL 505

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
             +  E     E         LLG + KL I    +S  P   T  + + L     CH+ 
Sbjct: 506 HDVDDEQ---KERM-------LLGHSEKLAITFGLMST-PSDLTIQVMKNLRICVDCHN- 553

Query: 606 LKMAEFISK 614
              A+F+SK
Sbjct: 554 --FAKFVSK 560


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 200/641 (31%), Positives = 346/641 (53%), Gaps = 25/641 (3%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA----VCGDQFVTA 156
           +N   + C + ++L       ++L  C  E  +   +   A + K+     + G + V A
Sbjct: 49  NNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDA 108

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           SL     KCGDI     V   M    I + N L+A   K+    +A   +  +   +V P
Sbjct: 109 SL-----KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP 163

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESV 275
           + YT S++      LS   E ++ H   + L   +S   V +AL+ MY+K G   +A+ V
Sbjct: 164 DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLV 223

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
            + + +++V+  TA+I G+ Q G+  + ++    M  + + PNEYT+   L SC +L++ 
Sbjct: 224 LDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             G + H  ++K G        T+++ MY     + ++ +  K + +  + VSW + I+G
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI-EYPNQVSWTSLISG 342

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             +N + E A+  F +M+R+    + FT SS L+ CS L       QIH  + K  F+ +
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
            + GS LI+ Y KCG  + A  VF  L+  DV+S N+MI +Y+QNG  R+A+ LFE+M+ 
Sbjct: 403 KYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN 462

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
            G++P + T L+VL AC++S LV++G ++F+S  K+  +L  + HY+CMVDLLGRAG+LE
Sbjct: 463 LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND-HYACMVDLLGRAGRLE 521

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
            A +  + + I P   +WR L +AC+ H  ++MAE I+++ILE++P D    + +SN+YA
Sbjct: 522 EAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYA 580

Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK-SHSEMPKVYEKLKQLM 694
             G      E +  MK  ++ K P  SW+E+  + + F + +  SH    ++ E L++L+
Sbjct: 581 STGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELI 640

Query: 695 QQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGL 724
           ++ +D+G+ +++           KE  +  HSE+LA+ F +
Sbjct: 641 KKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAV 681


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/623 (31%), Positives = 332/623 (53%), Gaps = 18/623 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C R   L  GRR HA I  T +  D F+   L+ MY KCG ++   AV +++   +
Sbjct: 6   LLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKIESPN 65

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S + ++     N L  +A   +  +D   V+ +       ++ C SL ++D G+ L A
Sbjct: 66  IFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRALEA 125

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYE 301
           +   + +     V N+LL MY K G +++A   F+ +   ++V+SWTA+I+GF  HG  +
Sbjct: 126 RITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHGCED 185

Query: 302 KPLRLVCLMREDGIDPNEYTFT--VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             L     M  +G+ PNE TF   +AL +C++L     G   H  ++  G+     V  +
Sbjct: 186 LALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLD-SSIVRNS 244

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +++MY   G + EA++  +  G   + ++W+  IA +  N    +A+  + +M       
Sbjct: 245 LLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEP 304

Query: 420 DEFTYSSILKACSLL-PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           DE+T++S+L ACS+   +L     +H R+     E  + + ++LI  Y + G  EDA RV
Sbjct: 305 DEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLEDALRV 364

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   ++V+W ++I A++Q+G    AI L  +M +EG++  N  FL+VL ACSH+ ++
Sbjct: 365 FEKMNHWNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNIVFLSVLHACSHAVVL 423

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G   F+ MV ++G+    AHYSCMVDLL R G++  A   + ++P +P     + L A
Sbjct: 424 EAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLA 483

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR   D      +++    L P DAA YV +S+ YA      +  E ++ M    + K 
Sbjct: 484 ACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKLGVKKP 543

Query: 659 PGCSWIEVYNKIYRFFSQNKS-HSEMPKVYEKLKQLMQQIED---------IGHT--DNE 706
            G S +EV N++++FF+ N S HSE  ++  +L++L   +++         IGH   ++ 
Sbjct: 544 RGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTGQIGHRLEEDG 603

Query: 707 KEDRVLYHSERLAVGFGLISLPA 729
           KED +  HSER+A+ FGL+ +PA
Sbjct: 604 KEDLLALHSERVAIAFGLLRVPA 626



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 216/414 (52%), Gaps = 5/414 (1%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
            ++++L  CG   ++ EG+++HA+ +         + N L+ MY KCG ME+A +VFE +
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
              N+ SW+ II     +G   + L L   M  +G+  +       +++C+SL +   G 
Sbjct: 62  ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
              A++   G  L   V  ++++MY   G I  A+K  ++M    S VSW A I+GF  +
Sbjct: 122 ALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALH 181

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSI--LKACSLLPSLATCEQIHSRIVKSKFESNVH 457
              + A++ F +MV      +E T+ SI  L+ACS L  LA  +++H  I+ +  +S++ 
Sbjct: 182 GCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI- 240

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
           V +SL+  Y KCG  ++A RVF +     ++++W++MI AYS NG  R+A+ L++KM +E
Sbjct: 241 VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLE 300

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G+ P   TF ++L ACS +G      +     ++  G+  +    + ++++ GR G+LE 
Sbjct: 301 GLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRYGQLED 360

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AL     +        W  L AA   H ++   +   +  LE    D  V++++
Sbjct: 361 ALRVFEKMN-HWNLVAWTALIAAFAQHGNVHAIDLSWRMHLEGVQADNIVFLSV 413



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 184/376 (48%), Gaps = 13/376 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD   +I  +S CS    L+ GR   A IT         V  SL+NMY K G I +    
Sbjct: 99  LDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKF 158

Query: 175 VKQMPY-LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI--CGSL 231
            + M     + S   +++G+A +   D A  FF K+    V+PN  T+ ++LA+  C +L
Sbjct: 159 FQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNL 218

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAI 290
           + +  GK+LH   +    L  + V N+LL MY KCG +++A  VFE     RN+I+W+ +
Sbjct: 219 NLLAAGKKLHELILDAG-LDSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTM 277

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM-GYMFHAQVIKRG 349
           I  +  +GD  + L L   M  +G++P+EYTFT  L +C+   ++   G   H ++  +G
Sbjct: 278 IAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKG 337

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +     + TA+++MY   G++ +A +  ++M    + V+W A IA F ++     AI+  
Sbjct: 338 LEKKMVLATALINMYGRYGQLEDALRVFEKM-NHWNLVAWTALIAAFAQHGNV-HAIDLS 395

Query: 410 SQMVRNDAACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
            +M       D   + S+L ACS   +L +  +C Q    +            S +++  
Sbjct: 396 WRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSCFQ--EMVADFGVRGGAAHYSCMVDLL 453

Query: 467 NKCGSWEDAERVFSQL 482
            +CG   +AE +   +
Sbjct: 454 ARCGRVAEAEELLHSM 469


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/595 (31%), Positives = 310/595 (52%), Gaps = 20/595 (3%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           +  L  C+  + L  G++ H+L+             SL+NMY+KCG +   + V     +
Sbjct: 15  VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74

Query: 181 -LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             ++ + N +++G+  N L  + F F+ K+    V P+ YT+  ++  C     + E K+
Sbjct: 75  ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTC---CEVMEVKK 131

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K+       V +AL+  Y+K G MEDA+ VF  L  R+V+ W A+ING+ + G 
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ L +   M   G+ P+ +T T  L+  AS  +   G   H  V+K G   G  V  A
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY     I +A   + EM       SWN+ I+   +    +  +  F +M+ +    
Sbjct: 252 LIDMYGKCKHIGDALI-IFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP 310

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE--------SNVHVGSSLIEAYNKCGS 471
           D  T +++L ACS L +L    +IH  ++ +            N+ V +++++ Y KCGS
Sbjct: 311 DLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGS 370

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             +A ++F  ++  DV SWN MI  Y  +G A +A+ +F +M     +P   T + VLSA
Sbjct: 371 MNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSA 430

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C+H+G V  G+     M   +G++P   HY+C++D+LGRAG LE A   +  +PI+    
Sbjct: 431 CNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPV 490

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +WR L  ACR H + ++AE  ++Q+L+L+P+    YV +SN+Y   G   +  E RK MK
Sbjct: 491 VWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMK 550

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE 706
            + + K PGCSWIE+ + ++ F + +++HSE       L  L  Q+ DIG   +E
Sbjct: 551 EQNVKKTPGCSWIELKDGVHVFRTGDRTHSE-------LNALTNQLCDIGFILDE 598


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 340/653 (52%), Gaps = 51/653 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQM 178
           + +LS C   + L+  ++ H+ I KT +    F  + L+   A    GD+   +++ K +
Sbjct: 32  LTLLSNC---KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              +    N ++ G + +     A  +++ +     +PN YT+ ++   C  +    EGK
Sbjct: 89  RNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148

Query: 239 QLHAQTMKL------------------------------QYLSKTAVS-NALLTMYIKCG 267
           Q+HA  +KL                              +   + AVS  AL+T Y   G
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            +++A  +F+ +  R+V+SW A+I+G+ Q G  E+ +     MR   + PN  T    L+
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268

Query: 328 SCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           +CA   +S  +G    + +  RG+     +   ++DMY   G++ EA    +++ +  + 
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI-QDKNV 327

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           VSWN  I G+      +EA+  F +M++++   ++ T+ SIL AC+ L +L   + +H+ 
Sbjct: 328 VSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387

Query: 447 IVKS--KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
           + K+    ++ V + +SLI+ Y KCG    A+R+F  +    + +WN+MI  ++ +G   
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTD 447

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            A+ LF +M  EG  P + TF+ VL+AC H+GL+  G++ F SM+++Y + P+  HY CM
Sbjct: 448 TALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCM 507

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           +DL GRAG  + A   + N+ +KP   IW  L  ACR H  +++AE ++K + EL+P++ 
Sbjct: 508 IDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENP 567

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
           + YV LSN+YA AG   D  + R  +    + K PGCS IEV + ++ F   +K H +  
Sbjct: 568 SAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSN 627

Query: 685 KVYEKLKQLMQQIEDIGHT----------DNEKEDRVL-YHSERLAVGFGLIS 726
           ++Y+ L ++  ++E  G            D E ++ VL +HSE+LA+ FGLIS
Sbjct: 628 EIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLIS 680



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 119/512 (23%), Positives = 225/512 (43%), Gaps = 67/512 (13%)

Query: 120 VIEVLSYCSRE-ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++ VLS C++    L+LG    + I    +  +  +   L++MY KCGD++    + +++
Sbjct: 263 MLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKI 322

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++ S N ++ GY   + + +A   F ++   ++ PN  T+ ++L  C +L A+D GK
Sbjct: 323 QDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGK 382

Query: 239 QLHAQTMK-LQYLSKT-AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
            +HA   K ++ +  T A+  +L+ MY KCG +  A+ +F+ +  +++ +W A+I+GF  
Sbjct: 383 WVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAM 442

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG  +  L L   M  +G  P++ TF   L +C            HA ++  G       
Sbjct: 443 HGHTDTALGLFSRMTSEGFVPDDITFVGVLTACK-----------HAGLLSLGRRY---- 487

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN- 415
                  +S + + ++   +L   G           I  F R    +EA      +V+N 
Sbjct: 488 -------FSSMIQDYKVSPKLPHYG---------CMIDLFGRAGLFDEA----ETLVKNM 527

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   D   + S+L AC +   +   E +   + + + E N      L   Y   G WED 
Sbjct: 528 EMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPE-NPSAYVLLSNIYAGAGRWEDV 586

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS-- 533
            ++ ++L        ++ +K            ++ E +V + + P ++    +L      
Sbjct: 587 AKIRTRLN-------DNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMR 639

Query: 534 --HSGLVQDGQKVFESMVKEY--GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
              +G V D  +V   M +E+  G+L   +H+S          KL IA   IS  P   T
Sbjct: 640 LEKAGFVPDTSEVLYDMDEEWKEGVL---SHHS---------EKLAIAFGLISTKP-GTT 686

Query: 590 APIWRPLFAACRCHSDLKM-AEFISKQILELD 620
             I + L     CHS  K+ ++  +++I+  D
Sbjct: 687 IRIMKNLRVCGNCHSATKLISKIFNREIIARD 718


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 188/579 (32%), Positives = 311/579 (53%), Gaps = 6/579 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C+    L  GR  HAL  ++     D FV A+LV+MYAKC  +   +         
Sbjct: 105 LLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEP 164

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           D+     ++ GY +N +  +A  FF + + G    P+  T  ++++    L  +  G+  
Sbjct: 165 DMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQAC 224

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HA  ++  +     + NA+L  Y++ G ++ A  +FEG+ +++V++W+ ++ G+ Q GD 
Sbjct: 225 HAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDI 284

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            + L     M E GI PN  T    + +C+   +   G   H   +K G  L   V TA+
Sbjct: 285 CEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATAL 344

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           VDMY       EA +    M K   +V+W   I+GF +N   +E++  F  M+      D
Sbjct: 345 VDMYMKCSCHEEAMQLFCRMSKK-DAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPD 403

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T   +L ACS    +     +H  +V + F   + V ++L++ Y+KCG+   A RVF 
Sbjct: 404 AVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFE 463

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
                DVV W+SMI  Y  +G  ++A+ LF+ MV   ++P + TF++VLSACSHSGLVQ+
Sbjct: 464 SAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQE 523

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIFISNLPIKPTAPIWRPLFAA 599
           G+++FESM + YG++P   H+S MVDLLGRAG+L E A +   N   +  A  W  L AA
Sbjct: 524 GKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGN--GRADAHTWCALLAA 581

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H D +M+E ++ ++L+LDPD A  Y  L+N+Y      + A+E R +++ + ++K P
Sbjct: 582 CRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVP 641

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           GCS +E+ N ++ F +  + H +  K+   L++  + ++
Sbjct: 642 GCSAVELNNVMHTFTAGERPHKDWEKISRLLREFSRTLK 680



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 187/375 (49%), Gaps = 4/375 (1%)

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSKTAVSNALLTMYI 264
            L +  + V+P+ +T S +L  C  L A+  G+ LHA  ++     +   V+ AL+ MY 
Sbjct: 87  LLLIPCLRVRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYA 146

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL-MREDGIDPNEYTFT 323
           KC  M  + + +    + +++  T+++ G++Q+    + L      +   G  P+  T  
Sbjct: 147 KCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLV 206

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             +++ A L++   G   HA VI+        +  AI+  Y  +G +  A++  + M + 
Sbjct: 207 SVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEK 266

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              V+W+  + G+ ++    EA+ A+ +MV      +  T  S+++ACSL P +    ++
Sbjct: 267 -DVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRV 325

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H   VK   E  + V ++L++ Y KC   E+A ++F +++  D V+W  +I  ++QNG  
Sbjct: 326 HDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLP 385

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
            +++ +F+ M+  G  P   T + VL+ACS SG+++    +   +V   G   +    + 
Sbjct: 386 DESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVIT-GFCDKIFVAAA 444

Query: 564 MVDLLGRAGKLEIAL 578
           +VDL  + G L  A+
Sbjct: 445 LVDLYSKCGNLGCAV 459



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 187/389 (48%), Gaps = 24/389 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S  ++ + +  G+  HA + +     D  +  +++  Y + G +++   + + M 
Sbjct: 205 LVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMT 264

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ + +C++ GY ++    +A + + K+    ++PN  T  +++  C     I+EG++
Sbjct: 265 EKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRR 324

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K+    +  V+ AL+ MY+KC   E+A  +F  + +++ ++W  +I+GF Q+G 
Sbjct: 325 VHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGL 384

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ +R+   M   G  P+  T    LA+C+        +  H  ++  G     FV  A
Sbjct: 385 PDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAA 444

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VD+YS  G +  A +   E       V W++ I+G+  +   ++A+E F  MV +    
Sbjct: 445 LVDLYSKCGNLGCAVRVF-ESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKP 503

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIV---KSKFESNVHV---------GSSLIEAYN 467
           +  T+ S+L ACS           HS +V   K  FES   V          S++++   
Sbjct: 504 NSLTFVSVLSACS-----------HSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLG 552

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           + G  ++A ++      AD  +W +++ A
Sbjct: 553 RAGELQEAAKLLHGNGRADAHTWCALLAA 581



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +++VL+ CS    +      H  +  T  C   FV A+LV++Y+KCG++   V V 
Sbjct: 403 DAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVF 462

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           +     D+   + +++GY  + L  QA   F  +    V+PN  T+ ++L+ C     + 
Sbjct: 463 ESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQ 522

Query: 236 EGKQLHAQTMKLQYLSKTAVSN-ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           EGK++     ++  +   AV + A++ +  + G +++A  +  G  + +  +W A++   
Sbjct: 523 EGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAAC 582

Query: 295 KQHGDYE 301
           + H D E
Sbjct: 583 RAHHDTE 589



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 128/279 (45%), Gaps = 16/279 (5%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERV 478
           D FT S +LKAC++LP+LA    +H+  ++S    ++  V ++L+  Y KC     +   
Sbjct: 98  DAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINA 157

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV-EGIRPTNSTFLAVLSACSHSGL 537
           ++  +  D+V   SM+  Y QN  A +A+  F + VV +G  P+  T ++V+SA +    
Sbjct: 158 YNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKD 217

Query: 538 VQDGQKVFESMVK---EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           V +GQ     +++   EY ++   A    ++    R G ++ A      +  K     W 
Sbjct: 218 VLNGQACHAFVIRNNFEYDLVLVNA----ILGFYMRIGAVQAARRLFEGMTEKDVV-TWS 272

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            +        D+  A    K+++E      A  VT+ ++     L  D EE R++    +
Sbjct: 273 CMVTGYVQSGDICEALTAYKKMVEAGIKPNA--VTVVSVVQACSLAPDIEEGRRV---HD 327

Query: 655 ISKEPGCSW-IEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           I+ + GC   + V   +   + +   H E  +++ ++ +
Sbjct: 328 IAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSK 366


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 180/576 (31%), Positives = 300/576 (52%), Gaps = 1/576 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +  VL  C +   +  G   HA   KT++    +V +SL++MY + G I     V 
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP+ +  +   ++ G      + +  ++F ++   +   + YT++  L  C  L  + 
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK +H   +   +++   V+N+L TMY +CG M+D   +FE + +R+V+SWT++I  +K
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G   K +     MR   + PNE TF    ++CASL     G   H  V+  G+     
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V  +++ MYS  G +  A    + M +    +SW+  I G+ +    EE  + FS M ++
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
                +F  +S+L     +  +    Q+H+  +    E N  V SSLI  Y+KCGS ++A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             +F +    D+VS  +MI  Y+++G++++AI LFEK +  G RP + TF++VL+AC+HS
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           G +  G   F  M + Y + P + HY CMVDLL RAG+L  A   I+ +  K    +W  
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L  AC+   D++     +++ILELDP  A   VTL+N+Y+  G   +A   RK MK K +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
            KEPG S I++ + +  F S ++ H +   +Y  L+
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 209/427 (48%), Gaps = 9/427 (2%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--V 214
           SL+N     G++++   V  +MP+ DI S   ++  Y      D+A   F  +  +D  V
Sbjct: 49  SLIN----AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            P+    S +L  CG  S I  G+ LHA  +K   LS   V ++LL MY + G ++ +  
Sbjct: 105 SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR 164

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF  +  RN ++WTAII G    G Y++ L     M       + YTF +AL +CA LR 
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G   H  VI RG      V  ++  MY+  GE+ +     + M +    VSW + I 
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSLIV 283

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
            + R  +  +A+E F +M  +    +E T++S+  AC+ L  L   EQ+H  ++      
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++ V +S+++ Y+ CG+   A  +F  +   D++SW+++I  Y Q G   +    F  M 
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             G +PT+    ++LS   +  +++ G++V  ++   +G+       S ++++  + G +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSI 462

Query: 575 -EIALIF 580
            E ++IF
Sbjct: 463 KEASMIF 469



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 214/467 (45%), Gaps = 43/467 (9%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
           E L D       L  C+    ++ G+  H  +          V  SL  MY +CG+++  
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + + + M   D+ S   L+  Y +     +A   F+K+    V PN  T+++M + C SL
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S +  G+QLH   + L      +VSN+++ MY  CG +  A  +F+G+  R++ISW+ II
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+ Q G  E+  +    MR+ G  P ++     L+   ++     G   HA  +  G+ 
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE 443

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
               V +++++MYS  G I EA     E  +    VS  A I G+  + K++EAI+ F +
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEASMIFGETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEK 502

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN---- 467
            ++     D  T+ S+L AC+           HS     + +   H  + + E YN    
Sbjct: 503 SLKVGFRPDSVTFISVLTACT-----------HS----GQLDLGFHYFNMMQETYNMRPA 547

Query: 468 ------------KCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG---RARKAIILFE 511
                       + G   DAE++ ++++   D V W +++ A    G   R R+A     
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRA----A 603

Query: 512 KMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPE 557
           + ++E + PT +T L  L+   S +G +++   V ++M K  G++ E
Sbjct: 604 ERILE-LDPTCATALVTLANIYSSTGNLEEAANVRKNM-KAKGVIKE 648



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 146/279 (52%), Gaps = 3/279 (1%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR--EDG 314
           N+ L   I  G +  A  VF+ +   +++SWT+II  +    + ++ L L   MR  +  
Sbjct: 44  NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           + P+    +V L +C    N   G   HA  +K  +    +VG++++DMY  +G+I ++ 
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
           +   EM    ++V+W A I G     + +E +  FS+M R++   D +T++  LKAC+ L
Sbjct: 164 RVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
             +   + IH+ ++   F + + V +SL   Y +CG  +D   +F  ++  DVVSW S+I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            AY + G+  KA+  F KM    + P   TF ++ SAC+
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 16/191 (8%)

Query: 413 VRNDAACDEFTYSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           VRN      F  +SI    SLL  P      +I ++++  KF+ N H+  SLI A    G
Sbjct: 5   VRNCGTIQRFCTTSI----SLLQKPVEENIVRISNQVM-VKFDPNSHL-RSLINA----G 54

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV--EGIRPTNSTFLAV 528
           +   A +VF ++   D+VSW S+IK Y     + +A+ILF  M V    + P  S    V
Sbjct: 55  NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L AC  S  +  G+ +    VK   +L      S ++D+  R GK++ +    S +P + 
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKT-SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR- 172

Query: 589 TAPIWRPLFAA 599
            A  W  +   
Sbjct: 173 NAVTWTAIITG 183


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 195/623 (31%), Positives = 317/623 (50%), Gaps = 17/623 (2%)

Query: 134 ELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            LGR  HA   +    G   F+ A LVN+Y+K     +  + +   P   + S    ++G
Sbjct: 26  RLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISG 85

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML--AICGSLSAIDEGKQLHAQTMKLQYL 250
            A++A    A S F  +  + ++PN +T+ +    A C        G Q+HA  ++  YL
Sbjct: 86  AAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYL 145

Query: 251 SKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                VS A + MY K G +  A  +FE +  RNVI+W A++      G   +  +    
Sbjct: 146 PGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFG 205

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           +RE G  PN  +      +CA      +G  FH  V+  G  +   V  A+VD Y     
Sbjct: 206 LREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRC 265

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
             +A+     M +  +SVSW + I  + ++   E+A+  +           +F  SS+L 
Sbjct: 266 AGKARAVFDGM-RVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLT 324

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
            C+ L  L     +H+  V+S  ++N+ V S+L++ Y KCG  EDAE+VF  +   ++V+
Sbjct: 325 TCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVT 384

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           WN+MI  Y+  G A+ A+ +F+ M+  G   P + T + V++ACS  GL +DG ++F++M
Sbjct: 385 WNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTM 444

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            + +G+ P   HY+C+VDLLGRAG  E A   I  +P++P+  +W  L  AC+ H   ++
Sbjct: 445 RERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTEL 504

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
               S+++ ELDP D+  +V LSNM A AG  A+A + RK MK   I KEPGCSWI   N
Sbjct: 505 GRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKN 564

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-----------EDRVLYHSER 717
            ++ F++++  H    ++   L +L +Q++  G+  + +           E  V  HSE+
Sbjct: 565 VVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEK 624

Query: 718 LAVGFGLISLPAKNKFECSRTLE 740
           LA+ FGLI +P       ++ L 
Sbjct: 625 LALAFGLIHIPPSVPIRITKNLR 647



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 129/286 (45%), Gaps = 2/286 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V    + C+    L LG ++H  +       D  V+ ++V+ Y KC       AV   M 
Sbjct: 218 VCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMR 277

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  S   ++  YA++   + A + ++       +P  +  S++L  C  L  ++ G+ 
Sbjct: 278 VRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRA 337

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHA  ++    +   V++AL+ MY KCG +EDAE VF  + +RN+++W A+I G+   GD
Sbjct: 338 LHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGD 397

Query: 300 YEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVG 357
            +  L +   ++R  G  PN  T    + +C+    +  GY +F     + G+       
Sbjct: 398 AQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHY 457

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             +VD+    G    A + ++ M    S   W A +     + KTE
Sbjct: 458 ACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTE 503


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/587 (31%), Positives = 310/587 (52%), Gaps = 45/587 (7%)

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
           A  N ++  Y K      A + + +L  +D + +++   ++L  CG +S    GK++H  
Sbjct: 90  AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGF 149

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            +K        V NAL+ MY +C  +E A  VF+ +++R+V+SW+ +I    ++ +++  
Sbjct: 150 VLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMA 209

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR--GMALGDFVGTAIV 361
           L L+  M    + P+E      +   A   N  MG   HA VI+      +G    TA++
Sbjct: 210 LELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALL 269

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA---------------- 405
           DMY+  G +  A++    + +  + VSW A IAG  R+ + EEA                
Sbjct: 270 DMYAKCGHLGLARQLFNGLTQK-TVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328

Query: 406 ---------------IEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
                             F QM  +     + T  S+L  C++  +L   + +HS I K 
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
           + E +  + ++L++ Y KCG    A R+F +  + D+  WN++I  ++ +G   +A+ +F
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
            +M  +G++P + TF+ +L ACSH+GLV +G+K+FE MV  +G++P+  HY CMVDLLGR
Sbjct: 449 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 508

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AG L+ A   I ++PIKP   +W  L AACR H + ++ E  + Q+LE++P++    V +
Sbjct: 509 AGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 568

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
           SN+YA A   +DA   RK MK   + KEPG S IEV   ++ F   ++SH ++ ++ E L
Sbjct: 569 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEML 628

Query: 691 KQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
            ++ +++ + G+            + EKE  + YHSE+LA+ FGLIS
Sbjct: 629 AEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLIS 675



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 182/417 (43%), Gaps = 36/417 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D      VL  C +    +LG+  H  + K  +  D FV  +L+ MY +C  ++    V
Sbjct: 122 VDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLV 181

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +M   D+ S + ++   ++N  FD A     +++ + V+P+     +M+ +    + +
Sbjct: 182 FDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANM 241

Query: 235 DEGKQLHAQTMKLQYLSKTAV--SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
             GK +HA  ++        V  + ALL MY KCG +  A  +F GL Q+ V+SWTA+I 
Sbjct: 242 RMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 301

Query: 293 G-------------------------------FKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           G                               + Q    ++   L   MR  G+ P + T
Sbjct: 302 GCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVT 361

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
               L+ CA      +G   H+ + K  + +   + TA+VDMY+  G+I  A +   E  
Sbjct: 362 IVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-A 420

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
            S     WNA I GF  +   EEA++ F++M R     ++ T+  +L ACS    +   +
Sbjct: 421 ISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGK 480

Query: 442 QIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKA 496
           ++  ++V +      +     +++   + G  ++A E + S     + + W +++ A
Sbjct: 481 KLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 126/260 (48%), Gaps = 15/260 (5%)

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
           + S  WN  I  + +  +   A+  ++Q+ + D   D F   S+LKAC  +      ++I
Sbjct: 87  SPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEI 146

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  ++K   + +V VG++L+  Y +C   E A  VF ++   DVVSW++MI++ S+N   
Sbjct: 147 HGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEF 206

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK----EYGILPEEA 559
             A+ L  +M    +RP+    +++++  + +  ++ G+ +   +++    E+  +P   
Sbjct: 207 DMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTT- 265

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE--FISKQIL 617
             + ++D+  + G L +A    + L  K T   W  + A C   + L+ A   F S Q  
Sbjct: 266 --TALLDMYAKCGHLGLARQLFNGLTQK-TVVSWTAMIAGCIRSNRLEEARALFDSTQ-- 320

Query: 618 ELDPDDAAVYVTLSNMYAEA 637
                D  ++  + + YA+A
Sbjct: 321 ---NRDVMIWTAMLSAYAQA 337



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 2/183 (1%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           K  ++ +LS C+    L+LG+  H+ I K  V  D  +  +LV+MYAKCGDI +   +  
Sbjct: 359 KVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFI 418

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           +    DI   N ++ G+A +   ++A   F +++   V+PN  T+  +L  C     + E
Sbjct: 419 EAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTE 478

Query: 237 GKQLHAQTMK-LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
           GK+L  + +     + +      ++ +  + G++++A  + + + ++ N I W A++   
Sbjct: 479 GKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 538

Query: 295 KQH 297
           + H
Sbjct: 539 RLH 541


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 171/455 (37%), Positives = 265/455 (58%), Gaps = 12/455 (2%)

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +SW ++I G  + G  E  L     MR   +  +EYT    L S AS++        H  
Sbjct: 7   VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +IK G      V  A++DMY+  G++  A     +M      VSW + + G+  N   EE
Sbjct: 67  IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKM-VDKDVVSWTSLVTGYSHNGSYEE 125

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           AI+ F +M  +    D+   +S+L AC+ L  +   +QIH+ +VKS  ES++ V +SL+ 
Sbjct: 126 AIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVT 185

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y KCGS  DA R F  +   DV+SW ++I  Y+QNGR + ++  +++M+  G +P   T
Sbjct: 186 MYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYIT 245

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+ +L ACSH+GL+  G+  FE+M K YGI P   HY+CM+DLLGR+GKL  A   ++ +
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM 305

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
            + P A +W+ L AACR H +L++ E  +K + EL+P ++  YV LSNMY+ AG   DA 
Sbjct: 306 VVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAA 365

Query: 645 EQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-- 702
             R+LM+ + I KEPG SWIE  +K+  F S++++H    ++Y K+ +++  I++ G+  
Sbjct: 366 RIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVP 425

Query: 703 --------TDNE-KEDRVLYHSERLAVGFGLISLP 728
                   TD+E KE  + YHSE+LAV FGL+++P
Sbjct: 426 DMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVP 460



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 191/391 (48%), Gaps = 17/391 (4%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           M + D  S N L+ G  +    + A SFF K+   D++ + YT  ++L    S+  +   
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
             +H   +K  + +   V+NAL+ MY K G ++ A  VF  +V ++V+SWT+++ G+  +
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G YE+ ++L C MR  G+ P++      L++CA L     G   HA ++K G+     V 
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVD 180

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++V MY+  G I +A +    M  +   +SW A I G+ +N + + +++ + QM+    
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNM-PTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 418 ACDEFTYSSILKACS---LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
             D  T+  +L ACS   LL S     +   ++   K     +  + +I+   + G   +
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHY--ACMIDLLGRSGKLAE 297

Query: 475 AERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIILFE---KMVVEGIRPTNSTFLAVLS 530
           A+ + +Q+  A D V W +++ A     R  K + L E   K + E + P NS    +LS
Sbjct: 298 AKGLLNQMVVAPDAVVWKALLAA----CRVHKELELGEMAAKNLFE-LEPMNSMPYVMLS 352

Query: 531 AC-SHSGLVQDGQKVFESMVKEYGILPEEAH 560
              S +G  +D  ++   +++  GI  E  +
Sbjct: 353 NMYSAAGKWEDAARI-RRLMRSRGICKEPGY 382



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 3/258 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H LI KT     + V  +L++MYAK G +   + V  +M   D+ S   L+ GY+ N  +
Sbjct: 64  HCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSY 123

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           ++A   F K+    V P+    +++L+ C  L+ +D G+Q+HA  +K    S  +V N+L
Sbjct: 124 EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSL 183

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +TMY KCG + DA   F+ +  R+VISWTA+I G+ Q+G  +  L+    M   G  P+ 
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDY 243

Query: 320 YTFTVALASCA--SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
            TF   L +C+   L  S   Y F A     G+  G      ++D+    G++ EAK  L
Sbjct: 244 ITFIGLLFACSHNGLLGSGRAY-FEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLL 302

Query: 378 KEMGKSASSVSWNAQIAG 395
            +M  +  +V W A +A 
Sbjct: 303 NQMVVAPDAVVWKALLAA 320


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 201/631 (31%), Positives = 334/631 (52%), Gaps = 28/631 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D  FV  V+  CS    L  G+  H  I +T      FV  SLVNMY KCG +     V 
Sbjct: 228 DATFV-SVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVF 286

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           ++M   ++ S   ++  YA+      AF  + ++D    +PN  T+  ++  C     + 
Sbjct: 287 EKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLP 343

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR--NVISWTAIING 293
             +Q+HA  +   + S   +   L+TMY KCG ++ A S+FE L +R  N ++W A+I+G
Sbjct: 344 RAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISG 403

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
             QHG+ ++ L     M  +G+ PN  T+  +L +C+SL +   G   HA+++   +   
Sbjct: 404 LAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENIHEA 463

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           + +  A+++MY   G + EA  +  +M +    VSWN  IA + ++    +A+E F QM 
Sbjct: 464 N-LSNAVINMYGKCGSLDEAMDEFAKMPER-DVVSWNTMIATYAQHGSGRQALEFFKQMD 521

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK--FESNVHVGSSLIEAYNKCGS 471
                 D  TY   + AC  +PSLA  + IHS +  +    E +  V ++L+  Y +CGS
Sbjct: 522 LEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGS 581

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             DA+ VF +  + ++V+W+++I A +Q+GR  +A+ LF +M ++G +P   TF  +++A
Sbjct: 582 LHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAA 641

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS  G+V+DG   F SMV++Y I   E H+  MVDLLGRAG LE A   +   P      
Sbjct: 642 CSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCALAHA 701

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT----LSNMYAEAGLQADAEEQR 647
           +   L  AC  H D++    I++  LELD  ++A +      L+ +Y  AG   DA   R
Sbjct: 702 V---LLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVR 758

Query: 648 KLMKMKEISKEPGC-SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ-----IEDIG 701
           K ++ +   +EPG  SWIEV N+++  F ++    + P++ +K++  +Q+     +E+ G
Sbjct: 759 KAVESRNARREPGGRSWIEVKNRVHE-FGEDDDRLQGPRL-DKIRGELQRLSSLAVEEGG 816

Query: 702 HTDNEKEDRVLY---HSERLAVGFGLISLPA 729
              +E     +    HSE++A+GFG++S PA
Sbjct: 817 ICKDENARAHILGCCHSEKVAIGFGIVSTPA 847



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 270/523 (51%), Gaps = 13/523 (2%)

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           S ESL   ++   +L  C+ ++    G+  H  I  +    ++++   L+ MYAKCG ++
Sbjct: 20  SSESLQPARYA-SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLE 78

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
             + V + +P  ++ S   L+  YAK     +    F K+     +P+ + +ST+L  C 
Sbjct: 79  DALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACS 138

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           S  A++EGK +H     L  +    V NA++ +Y KCG + +A++VFE L +RN++SW A
Sbjct: 139 SAGALNEGKAIH-DCAVLAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNA 197

Query: 290 IINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           +I    Q+G  +  +++  LM  DG + PN+ TF   + +C++L +   G   H ++I+ 
Sbjct: 198 LIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRT 257

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G     FVG ++V+MY   G +  A+   ++M  S + VSW   I  + +      A + 
Sbjct: 258 GFDSYLFVGNSLVNMYGKCGSVDRARLVFEKM-SSRNVVSWTVMIWAYAQQGFIRAAFDL 316

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           + +M   D   +  T+ +++ +C     L   EQIH+ +V S F+S+  +   L+  Y K
Sbjct: 317 YKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGK 373

Query: 469 CGSWEDAERVFSQLT--AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           CGS + A  +F  L   + + V+WN+MI   +Q+G +++A+  F KM +EG+RP + T+L
Sbjct: 374 CGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYL 433

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           A L ACS    +  G+++   ++ E   + E    + ++++ G+ G L+ A+   + +P 
Sbjct: 434 ASLEACSSLNDLTRGRQLHARILLEN--IHEANLSNAVINMYGKCGSLDEAMDEFAKMPE 491

Query: 587 KPTAPIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYV 628
           +     W  + A    H   + A EF  +  LE    D A Y+
Sbjct: 492 RDVVS-WNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYL 533



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 204/410 (49%), Gaps = 20/410 (4%)

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           LK     +QP  Y  +++L  C    +   GK +H   +         + N L+ MY KC
Sbjct: 17  LKKSSESLQPARY--ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKC 74

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
           G +EDA  VFE L   NV SWTA+I  + + G   + L L   M+ DG  P+ + F+  L
Sbjct: 75  GCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVL 134

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            +C+S    + G   H   +  GM     VG AIV++Y   G + EAK   + + +  + 
Sbjct: 135 TACSSAGALNEGKAIHDCAVLAGMET-QVVGNAIVNLYGKCGRVHEAKAVFERLPER-NL 192

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQM-----VR-NDAACDEFTYSSILKACSLLPSLATC 440
           VSWNA IA   +N   ++A++ F  M     VR NDA     T+ S++ ACS L  L   
Sbjct: 193 VSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDA-----TFVSVVDACSNLLDLPRG 247

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +  H RI+++ F+S + VG+SL+  Y KCGS + A  VF ++++ +VVSW  MI AY+Q 
Sbjct: 248 KSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ 307

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G  R A  L+++M  E   P   TF+AV+ +C     +   +++   MV   G   +   
Sbjct: 308 GFIRAAFDLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVAS-GFDSDAVL 363

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKP-TAPIWRPLFAACRCHSDLKMA 609
             C+V + G+ G ++ A     NL  +   A  W  + +    H + K A
Sbjct: 364 QVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQA 413



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
            +Q+ ++  +     Y+S+L+ C+   S A  + +H  I+ S    N ++ + LI  Y K
Sbjct: 14  INQLKKSSESLQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAK 73

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  EDA  VF  L   +V SW ++I AY++ G  R+ + LF KM ++G +P    F  V
Sbjct: 74  CGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTV 133

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L+ACS +G + +G+ + +  V     +  +   + +V+L G+ G++  A      LP + 
Sbjct: 134 LTACSSAGALNEGKAIHDCAV--LAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLPERN 191

Query: 589 TAPIWRPLFAA 599
               W  L AA
Sbjct: 192 LVS-WNALIAA 201


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 178/527 (33%), Positives = 301/527 (57%), Gaps = 16/527 (3%)

Query: 214 VQPNHYTYSTMLAICGSLSA---IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           + P    YS + ++  ++S+   +     +HA+ +K    S   + + L++MY K G  E
Sbjct: 55  LSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDE 114

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASC 329
           DA+ +F+ +  ++++SW ++++G    G     L   C MR E G  PNE T    +++C
Sbjct: 115 DAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSAC 174

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           A +     G   H  V+K GM+    V  ++++MY  LG   +A  QL E     S VSW
Sbjct: 175 ADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG-FLDAASQLFEEMPVRSLVSW 233

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
           N+ +     N   E+ ++ F+ M R     D+ T  ++L+AC+        E IH+ I +
Sbjct: 234 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 293

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
             F +++ + ++L+  Y K G    +E +F ++   D ++W +M+  Y+ +   R+AI L
Sbjct: 294 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 353

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F+ MV EG+   + TF  +LSACSHSGLV++G+K FE M + Y + P   HYSCMVDLLG
Sbjct: 354 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 413

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
           R+G+LE A   I ++P++P++ +W  L  ACR + ++++ + +++Q+L LDP D   Y+ 
Sbjct: 414 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM 473

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN+Y+ AGL  DA + R LMK + +++ PGCS+IE  NKI+RF   ++ H    +++ K
Sbjct: 474 LSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTK 533

Query: 690 LKQLMQQIEDIG---------HTDNE--KEDRVLYHSERLAVGFGLI 725
           L++L+++I + G         H  +E  K D +  HSE+LA+ FGL+
Sbjct: 534 LEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 580



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 15/307 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S C+    L+ G+  H ++ K  + G   V  SL+NMY K G + +   + ++MP
Sbjct: 167 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 226

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++  +  N   ++    F  +    + P+  T   +L  C       + + 
Sbjct: 227 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 286

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA   +  + +   ++ ALL +Y K G +  +E +FE +  R+ I+WTA++ G+  H  
Sbjct: 287 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 346

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG--------YMFHAQVIKRGMA 351
             + ++L  LM ++G++ +  TFT  L++C     SH G        +   ++V +    
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSAC-----SHSGLVEEGKKYFEIMSEVYRVEPR 401

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  +  + +VD+    G + +A + +K M    SS  W A +         E   E   Q
Sbjct: 402 LDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQ 459

Query: 412 MVRNDAA 418
           ++  D +
Sbjct: 460 LLSLDPS 466



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIF----NGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSN 102
           +A QLF + P R+ +S + ++     NGY    EKG+       R    PD         
Sbjct: 217 AASQLFEEMPVRSLVSWNSMVVIHNHNGY---AEKGMDLFNLMKRAGINPD--------- 264

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY 162
                         +  ++ +L  C+           HA I +     D  +  +L+N+Y
Sbjct: 265 --------------QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLY 310

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           AK G + +   + +++   D  +   +LAGYA +A   +A   F  +    V+ +H T++
Sbjct: 311 AKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 370

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL- 279
            +L+ C     ++EGK+ + + M   Y  +  + +   ++ +  + G +EDA  + + + 
Sbjct: 371 HLLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 429

Query: 280 VQRNVISWTAIINGFKQHGDYE 301
           ++ +   W A++   + +G+ E
Sbjct: 430 MEPSSGVWGALLGACRVYGNVE 451


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/570 (32%), Positives = 315/570 (55%), Gaps = 9/570 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCG-----DIKSMVAVVKQMPYLDIASCNCLLA 191
           ++ HA I KT    D  +T S   + A C      D +  ++++ Q+   ++   N ++ 
Sbjct: 39  KQIHASIIKTMPSPDAQLTIS-TRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 97

Query: 192 GYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           G A  N    +    + ++    + P++YT   +L  C    A+ EG+++H Q +K+   
Sbjct: 98  GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLA 157

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S   VSN L+ MY  C ++  A  VF+   QR+++SWT +I G+ + G   + + L   M
Sbjct: 158 SDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEM 217

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGE 369
             + +  +  T  + L+SCA L +  +G   H  +I+   + L  FVG A+VDMY   G+
Sbjct: 218 CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGD 277

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
              A+K  +EM    + VSWN+ I+G  +  + +E++  F +M R     D+ T  ++L 
Sbjct: 278 ANFARKVFQEM-PVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLN 336

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +C+ L  L   + +H+ + +++  ++  +G++L++ Y KCGS + A  VF  +   DV S
Sbjct: 337 SCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYS 396

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           + +MI   + +G+  KA+ LF +M   GI P   TF+ VL+ACSH GLV++G+K FE M 
Sbjct: 397 YTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMS 456

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
             Y + P+  HY CMVDLLGRAG +  A  FI N+PI+P A +   L  AC+ H  +++ 
Sbjct: 457 TIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELG 516

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           E + K+I +++P     YV +SN+Y+ A    DA + RK MK + + K PGCS IE+   
Sbjct: 517 ESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGV 576

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
           I+ F   +KSH ++ ++Y+ L ++M  +++
Sbjct: 577 IHEFQKGDKSHPKIKEIYKLLDEIMSHLKN 606


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 198/598 (33%), Positives = 316/598 (52%), Gaps = 33/598 (5%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
            LV+ Y K G I     V  +MP  ++ S   ++ GY +  L D+A   F ++     + 
Sbjct: 83  GLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EK 138

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N  +++ ML        +DE ++L         ++ T +   L +     G + +A  +F
Sbjct: 139 NVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSE----GRLSEAREIF 194

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS-CASLRNS 335
           + + QRNV++WT++I+G+  +   +   +L  +M     D NE T+T  L     S R +
Sbjct: 195 DEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP----DKNEVTWTAMLKGYTRSGRIN 250

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL-GEIWEAKKQLKEMGKSASSVSWNAQIA 394
               +F A  +K   A    +      M  GL GE+ +A+    +M K     +W+A I 
Sbjct: 251 EAAELFKAMPVKPVAACNGMI------MGFGLNGEVGKARWVFDQM-KEKDDGTWSALIK 303

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
            + R     EA+  FS M R     +  +  SIL  C  L SL    Q+HS++V+S F+ 
Sbjct: 304 IYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDL 363

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +++V S LI  Y KCG     +RVF + ++ D+V WNS+I  Y+Q+G   KA+ +F +M 
Sbjct: 364 DIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMF 423

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
             G  P   TF+ VLSAC ++G V++G ++FESM  +Y +  +  HY+CMVDLLGRAGKL
Sbjct: 424 SSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKL 483

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
             A+  I N+P++  A +W  L +ACR H +L +AE  +K++L+L+P  A  Y+ LSN+Y
Sbjct: 484 NEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLY 543

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK-SHSEMPKVYEKLKQL 693
           A      D  E RK M+ + +SK PGCSWIEV NK++ F      SH E   + +KL++L
Sbjct: 544 ASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKL 603

Query: 694 MQQIEDIGH--------TDNEKEDRV---LYHSERLAVGFGLISLPAKNKFECSRTLE 740
              + + G+         D ++ED+V    +HSE++AV +GL+ +P        + L 
Sbjct: 604 GASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLR 661



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/467 (22%), Positives = 208/467 (44%), Gaps = 42/467 (8%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A +LF+K P+R  +S + L+ +GY+       +R  +    D  P+  +    S T  V 
Sbjct: 66  AQKLFDKMPERNTISWNGLV-SGYVKNGMISEARKVF----DKMPERNV---VSWTSMVR 117

Query: 108 CYSLESLLDKQFVI-------EVLSYCS------REECLELGRRYHALITKTAVCGDQFV 154
            Y  E L+D+  ++        V+S+         +  ++  RR   +I       D   
Sbjct: 118 GYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIP----VKDVVA 173

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
           + +++      G +     +  +MP  ++ +   +++GYA N   D A   F      +V
Sbjct: 174 STNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF------EV 227

Query: 215 QP--NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
            P  N  T++ ML        I+E  +L     K   +   A  N ++  +   G +  A
Sbjct: 228 MPDKNEVTWTAMLKGYTRSGRINEAAEL----FKAMPVKPVAACNGMIMGFGLNGEVGKA 283

Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
             VF+ + +++  +W+A+I  +++ G   + L L  LM+ +G+ PN  +    L+ C SL
Sbjct: 284 RWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSL 343

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +   G   H+Q+++    L  +V + ++ MY   G++   K+       S   V WN+ 
Sbjct: 344 ASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF-SSKDIVMWNSI 402

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAG+ ++   E+A+E F +M  + AA DE T+  +L AC     +    +I   + KSK+
Sbjct: 403 IAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESM-KSKY 461

Query: 453 ESNVHVG--SSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
           + +      + +++   + G   +A  +   +   AD + W +++ A
Sbjct: 462 QVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 142/326 (43%), Gaps = 33/326 (10%)

Query: 251 SKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK------- 302
           SKT  S NA++  Y       +A+ +F+ + +RN ISW  +++G+ ++G   +       
Sbjct: 44  SKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDK 103

Query: 303 -PLRLVC--------LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
            P R V          ++E  ID  E  F              +G +     +     L 
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF 163

Query: 354 DFVG----TAIVDMYSGL---GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           D +      A  +M  GL   G + EA++   EM +  + V+W + I+G+  N K + A 
Sbjct: 164 DMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQR-NVVAWTSMISGYAMNNKVDVAR 222

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F  M       +E T++++LK  +    +    +    + K+     V   + +I  +
Sbjct: 223 KLFEVMPDK----NEVTWTAMLKGYTRSGRINEAAE----LFKAMPVKPVAACNGMIMGF 274

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
              G    A  VF Q+   D  +W+++IK Y + G   +A+ LF  M  EG+RP   + +
Sbjct: 275 GLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSII 334

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEY 552
           ++LS C     +  G++V   +V+ +
Sbjct: 335 SILSVCGSLASLDHGRQVHSQLVRSH 360



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 4/185 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +I +LS C     L+ GR+ H+ + ++    D +V++ L+ MY KCGD+ +   V  +  
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             DI   N ++AGYA++   ++A   F ++      P+  T+  +L+ CG    + EG +
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 240 LHAQTMKLQYL--SKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
           +  ++MK +Y    KT     ++ +  + G + +A ++ E + V+ + I W A+++  + 
Sbjct: 453 IF-ESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRT 511

Query: 297 HGDYE 301
           H + +
Sbjct: 512 HKNLD 516



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/321 (20%), Positives = 141/321 (43%), Gaps = 43/321 (13%)

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +  ++ LG+I  A+    ++ +S +  SWNA +AG+F N++  EA + F +M   +    
Sbjct: 23  ISYFARLGQIDRARNIFDDL-QSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISW 81

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
               S  +K   +  +    +++  R        NV   +S++  Y + G  ++AE +F 
Sbjct: 82  NGLVSGYVKNGMISEARKVFDKMPER--------NVVSWTSMVRGYVQEGLIDEAELLFW 133

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           ++   +VVSW  M+    ++GR  +A  LF+ + V+ +  + +    +   CS  G + +
Sbjct: 134 RMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGL---CSE-GRLSE 189

Query: 541 GQKVFE-----------SMVKEYG-------------ILPE--EAHYSCMVDLLGRAGKL 574
            +++F+           SM+  Y              ++P+  E  ++ M+    R+G++
Sbjct: 190 AREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRI 249

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
             A      +P+KP A     +      + ++  A ++  Q+ E    D   +  L  +Y
Sbjct: 250 NEAAELFKAMPVKPVAAC-NGMIMGFGLNGEVGKARWVFDQMKE---KDDGTWSALIKIY 305

Query: 635 AEAGLQADAEEQRKLMKMKEI 655
              G + +A     LM+ + +
Sbjct: 306 ERKGFELEALALFSLMQREGV 326



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +S F S+  +    I  + + G  + A  +F  L +  V SWN+++  Y  N R  +A  
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 509 LFEKMVVEGIRPTNST--FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE--AHYSCM 564
           LF+KM      P  +T  +  ++S    +G++ + +KVF+ M       PE     ++ M
Sbjct: 69  LFDKM------PERNTISWNGLVSGYVKNGMISEARKVFDKM-------PERNVVSWTSM 115

Query: 565 VDLLGRAGKLEIALIFISNLPIK 587
           V    + G ++ A +    +P K
Sbjct: 116 VRGYVQEGLIDEAELLFWRMPEK 138


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 194/548 (35%), Positives = 299/548 (54%), Gaps = 43/548 (7%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +S +L  C  L ++  GKQ+H+  +         +SN LL  Y K G  + +  +F  + 
Sbjct: 65  FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMRED--------------------------- 313
           +RNV+S+  +ING+ Q GD E   +L   M E                            
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184

Query: 314 ----GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
               G  P+E+T    L  CA LR+   G   HA ++K G  L   VG+++  MY   G 
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGS 244

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + + +K +K M    + V+WN  IAG  +N   EE +  ++ M       D+ T+ S+L 
Sbjct: 245 LSDGEKLIKSM-PIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLS 303

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS L +L   +QIH+ ++K+   S + V SSLI  Y++ G  ED+ + F      DVV 
Sbjct: 304 ACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVL 363

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W+SMI AY  +GR  +A+ LF +M    +     TFL++L ACSHSGL + G + F+ MV
Sbjct: 364 WSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMV 423

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           K+Y + P   HY+C+VDLLGRAG+LE A   I ++P++P   IW+ L AAC+ H + +MA
Sbjct: 424 KKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMA 483

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
           E IS++I++LDP DAA YV LSN++A A    +  + RK M+ + + KEPG SW+E+ N 
Sbjct: 484 ERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNL 543

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DN-EKEDRVLYHSERL 718
           +++F   +KSH +  ++   LK+LM +++  G+           DN EKE  + +HSE+ 
Sbjct: 544 VHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKF 603

Query: 719 AVGFGLIS 726
           A+ F L++
Sbjct: 604 AIAFALMN 611



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 204/433 (47%), Gaps = 36/433 (8%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D      +L  C +   L  G++ H+LI  +    D+F++  L+N Y+K G  KS + + 
Sbjct: 61  DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120

Query: 176 KQMPYLDIASCNCLLAGY-------AKNALFD------------------------QAFS 204
             MP  ++ S N L+ GY       +   LFD                        QA S
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F ++ G+   P+ +T  ++L  C  L ++  G+++HA  +K  +   + V ++L  MYI
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYI 240

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           K G + D E + + +  R V++W  +I G  Q+G  E+ L    +M+  G  P++ TF  
Sbjct: 241 KSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVS 300

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L++C+ L     G   HA+VIK G +    V ++++ MYS  G + ++ K   +  ++ 
Sbjct: 301 VLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR-ENF 359

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL--LPSLATCEQ 442
             V W++ IA +  + + EEA+E F QM       +E T+ S+L ACS   L    T E 
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGT-EY 418

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNG 501
               + K K +  +   + +++   + G  E+AE +   +    D + W +++ A   + 
Sbjct: 419 FDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHK 478

Query: 502 RARKAIILFEKMV 514
            A  A  + E+++
Sbjct: 479 EAEMAERISEEII 491



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 37/230 (16%)

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-----KSKFESN 455
           + ++A + F+  + +D +     +S +L++C  L SL   +Q+HS I+     K KF SN
Sbjct: 46  RIKQAYDTFTSEIWSDPSL----FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISN 101

Query: 456 --------------------------VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
                                     V   + LI  Y + G  E A+++F +++  ++ +
Sbjct: 102 HLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIAT 161

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+MI   +Q    ++A+ LF++M   G  P   T  +VL  C+    +  GQ+V   ++
Sbjct: 162 WNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLL 221

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           K  G        S +  +  ++G L      I ++PI+ T   W  L A 
Sbjct: 222 K-CGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIR-TVVAWNTLIAG 269


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 180/571 (31%), Positives = 300/571 (52%), Gaps = 12/571 (2%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           +PV   SL         + V+  C  E     G   H L+ K+ +     +  +LV+MY 
Sbjct: 209 IPVNVASL---------VSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYG 259

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K GD++S + V   M   +  S N  L  +A     +     F  +   +V P   T S+
Sbjct: 260 KFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L     L     GK++H  +++    S   ++N+L+ MY K G +E A ++FE +  RN
Sbjct: 320 LLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRN 379

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SW A+I    Q+G   +   LV  M+++G  PN +T    L +C+ + +  MG   HA
Sbjct: 380 VVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHA 439

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             I R +    FV  A++D+Y+  G++  A+       K    VS+N  I G+ ++Q   
Sbjct: 440 WSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEK--DDVSYNTLIVGYSQSQCCF 497

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           E++  F QM       D  ++   L AC+ L +    ++IH  +V+    ++  + +SL+
Sbjct: 498 ESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLL 557

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y K G    A ++F+++T  DV SWN+MI  Y  +G+   A  LF+ M  +G+   + 
Sbjct: 558 DLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHV 617

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           +++AVLSACSH GLV  G+K F  M+ +  I P++ HY+CMVDLLGRAG+L  ++  I+N
Sbjct: 618 SYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITN 676

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P    + +W  L  +CR H D+++A   ++ + EL P+ +  Y  L NMY+E+G+  +A
Sbjct: 677 MPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEA 736

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            E + LMK +++ K P  SW++  NK+  F 
Sbjct: 737 NEIKTLMKSRKVQKNPAYSWVQSGNKLQAFL 767



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 228/488 (46%), Gaps = 10/488 (2%)

Query: 141 ALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD 200
           A + +  +  D F   +LV  YA  G       V  +MP  DI S N L++    N + +
Sbjct: 136 AALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLE 195

Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
            A    + +    +  N  +  +++  CG+      G  +H   +K    S   + NAL+
Sbjct: 196 DAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALV 255

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
            MY K G +E +  VF G+ ++N +SW + +  F   G +E  L +  +M E  + P   
Sbjct: 256 DMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSV 315

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T +  L +   L   H+G   H   I+R M    F+  +++DMY+  G + +A    + +
Sbjct: 316 TLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENI 375

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +  + VSWNA IA   +N    EA     +M +N    + FT  ++L ACS + S+   
Sbjct: 376 -EGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMG 434

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
           +QIH+  +     S++ V ++LI+ Y KCG    A+ +F + +  D VS+N++I  YSQ+
Sbjct: 435 KQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQS 493

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE-YGILPEEA 559
               +++ LF++M   GI     +F+  LSAC++    + G+++   +V+      P  A
Sbjct: 494 QCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLA 553

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
             + ++DL  + G L  A    + +  K  A  W  +      H  + +A     ++ +L
Sbjct: 554 --NSLLDLYTKGGMLATASKIFNRITRKDVAS-WNTMILGYGMHGQIDVA----FELFDL 606

Query: 620 DPDDAAVY 627
             DD   Y
Sbjct: 607 MKDDGVDY 614



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 7/269 (2%)

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL-----ASCASLRNSH 336
           R+   W ++       G   + LR+   M   G+ P++ TF  AL     A  A   +  
Sbjct: 69  RSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPA 128

Query: 337 MGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            G   HA  ++RG+ L D F G  +V  Y+  G   +A++   EM  +   VSWN+ ++ 
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEM-PARDIVSWNSLVSA 187

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
              N   E+A  A   M+R+    +  +  S++ AC           +H  ++KS  +S 
Sbjct: 188 LLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV 247

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V++G++L++ Y K G  E + RVF+ +   + VSWNS +  ++  G     + +F  M  
Sbjct: 248 VNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSE 307

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
             + P + T  ++L A    G    G++V
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEV 336



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 23/288 (7%)

Query: 359 AIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           A++  Y+ L +I  A+  L+    +  S+  WN+            EA+  ++ MVR+  
Sbjct: 43  ALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVRSGV 102

Query: 418 ACDEFTYSSILKACSLLPSL-----ATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGS 471
             D+ T+   L A +          A   ++H+  ++     ++V  G++L+  Y   G 
Sbjct: 103 RPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGR 162

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGR---ARKAIILFEKMVVEGIRPTNSTFLAV 528
             DA RVF ++ A D+VSWNS++ A   NG    A++A++    M+  GI    ++ ++V
Sbjct: 163 AADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVV---GMMRSGIPVNVASLVSV 219

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           + AC        G  V   +V + G+       + +VD+ G+ G LE ++   + +  K 
Sbjct: 220 VPACGTERDEGFGLSV-HGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKN 278

Query: 589 TAPIWRPL--FAACRCHSD-LKMAEFISKQILELDPDDAAVYVTLSNM 633
                  L  FA    H D L+M   +S+   E+ P      VTLS++
Sbjct: 279 EVSWNSALGCFAHAGFHEDVLEMFRVMSEH--EVTPGS----VTLSSL 320


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/623 (29%), Positives = 332/623 (53%), Gaps = 18/623 (2%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + ++  C   + ++ G    A I ++  C    +  SL+++Y +CG +     +++ M  
Sbjct: 264 MSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQ 323

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ + N ++   A+N    +A     ++D      N  TY ++L  C +L A+ +G+++
Sbjct: 324 RDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREI 383

Query: 241 HAQTMKLQYLSK-TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           HA+ +    L +  AV N+++TMY KCG  E A SVFE + +++ +SW A+IN    +  
Sbjct: 384 HARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSK 443

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF-VGT 358
           ++  L L   M  +G+  NE+T    L +C  L +  +    HA+    G       VG 
Sbjct: 444 FQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGN 503

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT--EEAIEAFSQMVRND 416
           ++V+MY+  G + +AKK    + +    V+W+  +A + +++      A + F +M    
Sbjct: 504 SVVNMYARCGSLLDAKKAFDSL-EEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEG 562

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDA 475
               E T+ S L AC+ + +L     +H R   S F E+++ +G+++I  Y KCGS  DA
Sbjct: 563 IKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDA 622

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           + VF Q+    ++SWNS+I AY+ NG A +A+   ++M+++G  P + T +++L   SH+
Sbjct: 623 KLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHA 682

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WR 594
           GL++ G + F S ++++G+ P      C+VDLL R G L+ A   I   P      I W 
Sbjct: 683 GLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWM 742

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L AAC+ + D +     ++++ EL+P  +  +V L+N+YA  G  +DA   RK+M+   
Sbjct: 743 TLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMS 802

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
           + KEPGCSWIE+   ++ F S    H ++ ++ E L++L  ++ + G+            
Sbjct: 803 VKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYVPDTTNVVHDVE 862

Query: 704 DNEKEDRVLYHSERLAVGFGLIS 726
           + +KE+ +  HSERLA+ FGL+S
Sbjct: 863 EGDKEEILSRHSERLAIVFGLMS 885



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 225/428 (52%), Gaps = 3/428 (0%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KC  +   + V   +   ++ S   ++A Y++N  + +A   F ++     +P+   
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +   L  C +   +D G+Q+H+  +     S   +SN+L+ MY KC  +  AE VF+G++
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
            R+V+SWTA++  + Q+G + + L  +  M  +G+ PN+ TF   +  CA LR   +G  
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H ++I  G+     +G A+V MY   G   + K     MG+S S + W   IAG  +N 
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQS-SVLLWTTMIAGCSQNG 239

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + EE +  F +M       +E TY S+++ C  L ++   E I +RI++S F S+  + +
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SLI  Y +CG  + A+ +   +   DVV+WN+M+ A +QNG   +AI L  +M +EG   
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAGKLEIALI 579
              T+L+VL AC++   +  G+++  + V   G+L  E A  + ++ + G+ G+ E A+ 
Sbjct: 360 NKVTYLSVLEACANLEALSQGREI-HARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418

Query: 580 FISNLPIK 587
               +P K
Sbjct: 419 VFEAMPRK 426



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 216/418 (51%), Gaps = 2/418 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   +  L  C+    L+ GR+ H+ +  + +  +  ++ SLVNMY KC D+     V 
Sbjct: 57  DKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVF 116

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D+ S   +LA YA+N  + QA     ++D   V+PN  T+ T++ +C  L  +D
Sbjct: 117 DGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD 176

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+++H + +         + NAL+ MY  CG  +D +SVF  + Q +V+ WT +I G  
Sbjct: 177 LGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCS 236

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+G YE+ L +   M  +G+  NE T+   +  C +L     G M  A++++        
Sbjct: 237 QNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL 296

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + T+++ +Y   G +  AK  L+ M +    V+WNA +    +N    EAI    +M   
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHMYQR-DVVAWNAMVTACAQNGDNWEAIHLLRRMDME 355

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWED 474
               ++ TY S+L+AC+ L +L+   +IH+R++     +  V VG+S+I  Y KCG  E 
Sbjct: 356 GFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEA 415

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           A  VF  +   D VSWN++I A   N + + A+ LF  M +EG+R    T L++L AC
Sbjct: 416 AMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 175/593 (29%), Positives = 329/593 (55%), Gaps = 16/593 (2%)

Query: 109 YSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           ++ ++L DK  ++ +L  C+  + L+   + H  +   A+    F    L++ +    D 
Sbjct: 25  HAQQTLTDK--LLSLLKQCTSTKSLQ---QIHTQMIINAIHKPNF----LLHRFIDLKDF 75

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
            +   +  Q+PY +  + N ++ G       F+    F+ ++    ++PN++TY  +   
Sbjct: 76  NNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIA 135

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C +L  ++ G+  H+  +K    +   V ++L+TMY +CG +  A  VF+ + +++++SW
Sbjct: 136 CANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSW 195

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            ++I+G+ + G     + L   MR+ G +P+E T    L +C  L +  +G      V++
Sbjct: 196 NSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVE 255

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
             M L  FVG+A++ MY   G++  A++    M K    V+WNA I G+ +N  ++EAI 
Sbjct: 256 NEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKK-DVVTWNAMITGYAQNGVSDEAII 314

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            FS M  +    D+ T   +L AC+ + +L   + + +   +   +++++V ++LI+ Y 
Sbjct: 315 LFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYA 374

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNSTF 525
           KCGS +DA RVF  +   + VSWN+MI A + +GR ++++ LF++M  EG  +RP + +F
Sbjct: 375 KCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISF 434

Query: 526 LAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
           + VLSAC H+GLV +G+++F+ M   +G++P+  H+SCMVDLL RAG +  A  FI  +P
Sbjct: 435 IGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMP 494

Query: 586 IKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
            KP   +   L  AC+   ++ ++E +   +LE++P ++  Y+  S ++A      D+  
Sbjct: 495 EKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSAR 554

Query: 646 QRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH---SEMPKVYEKLKQLMQ 695
            R LM+ + ++K PGCSWIE+ N+++ F + +  H    +M +V   L + M+
Sbjct: 555 MRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMK 607


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 207/673 (30%), Positives = 329/673 (48%), Gaps = 94/673 (13%)

Query: 146 TAVCGDQ--FVTASLVNMYAKCGDIKSMVAVVKQMP--YLDIASCNCLLAGYAKNALFDQ 201
           T  C D       SLV  YA    + + V+    +P    D    N +++ YA+ +    
Sbjct: 80  TLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAP 139

Query: 202 AFSFFLKL-DGIDVQPNHYTYSTMLAICGSLS--AIDEGKQLHAQTMKLQYLSKTAVSNA 258
           A + F  L     ++P+ Y+++ +L+  G L   ++    QLH   +K       +V NA
Sbjct: 140 AVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNA 199

Query: 259 LLTMYIKC----------------------------------GMMEDAESVFEGLVQRNV 284
           L+ +Y+KC                                  G +  A SVFE +  +  
Sbjct: 200 LVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFD 259

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           + W A+I+G+   G   +   L   M  + +  +E+TFT  L++CA++     G   H Q
Sbjct: 260 VVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQ 319

Query: 345 VIK------RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
           +I+         AL   V  A+V  YS  G I  A++    M      VSWN  ++G+  
Sbjct: 320 IIRLQPNFVPEAALP--VNNALVTFYSKCGNIAVARRIFDNM-TLKDVVSWNTILSGYVE 376

Query: 399 NQKTEEAIEAFSQMV--------------------------------RNDAACDEFTYSS 426
           +   ++A+E F +M                                  N   CD +TY+ 
Sbjct: 377 SSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCD-YTYAG 435

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
            + AC  L +L   +Q+H  IV+  FE +   G++LI  Y +CG+ ++A  +F  +   D
Sbjct: 436 AIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNID 495

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            VSWN+MI A  Q+G  R+A+ LF++MV EGI P   +FL VL+AC+HSGLV +G + FE
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFE 555

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM +++GI+P E HY+ ++DLLGRAG++  A   I  +P +PT  IW  + + CR   D+
Sbjct: 556 SMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDM 615

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           ++    + Q+ ++ P     Y+ LSN Y+ AG   DA   RKLM+ + + KEPGCSWIE 
Sbjct: 616 ELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEA 675

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHS 715
            NK++ F   +  H E  +VY+ L+ +  ++  +G+  +           +KE  +  HS
Sbjct: 676 GNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHS 735

Query: 716 ERLAVGFGLISLP 728
           ERLAVGFGL++LP
Sbjct: 736 ERLAVGFGLLNLP 748



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 207/484 (42%), Gaps = 62/484 (12%)

Query: 37  VEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFP---D 93
           ++ + P A+  A ++ ++ P +  L+ + ++  GY+   + G +R+ +   +  F    +
Sbjct: 205 MKCESPEATRDARKVLDEMPNKDDLTWTTMVV-GYVRRGDVGAARSVFEEVDGKFDVVWN 263

Query: 94  GFIDDGCSNTVPVTCYSL-------ESLLDKQFVIEVLSYCSREECLELGRRYHALITKT 146
             I     + + V  + L          LD+     VLS C+       G+  H  I + 
Sbjct: 264 AMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRL 323

Query: 147 AVCGDQFV-------TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
                 FV         +LV  Y+KCG+I     +   M   D+ S N +L+GY +++  
Sbjct: 324 Q---PNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380

Query: 200 DQA-------------------------------FSFFLKLDGIDVQPNHYTYSTMLAIC 228
           D+A                                  F K+   +V+P  YTY+  +A C
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
           G L A+  GKQLH   ++L +    +  NAL+TMY +CG +++A  +F  +   + +SW 
Sbjct: 441 GELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWN 500

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           A+I+   QHG   + L L   M  +GI P+  +F   L +C        G+ +  + +KR
Sbjct: 501 AMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYF-ESMKR 559

Query: 349 --GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
             G+  G+   T ++D+    G I EA+  +K M    +   W A ++G   +   E   
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV--HVGSSLIE 464
            A  Q+ +     D  TY  IL + +   S A C    +R+ K   +  V    G S IE
Sbjct: 620 HAADQLFKMTPQHDG-TY--ILLSNTY--SAAGCWVDAARVRKLMRDRGVKKEPGCSWIE 674

Query: 465 AYNK 468
           A NK
Sbjct: 675 AGNK 678


>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
 gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/558 (33%), Positives = 307/558 (55%), Gaps = 7/558 (1%)

Query: 150 GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL 209
           G   +   L+  Y + G       +  +MP  D+ +   +++GY     + QA+S F+ +
Sbjct: 42  GTSILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDM 101

Query: 210 --DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK-TAVSNALLTMYIKC 266
             +G D  PN +T S++L  C  +  +  G+ +H   +K +++     V NAL+ MY  C
Sbjct: 102 VKNGND-PPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASC 160

Query: 267 GM-MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
           G+ M DA  VF  + ++NV+SWT +I G+   G+  + L++   M  DG+  N ++ ++A
Sbjct: 161 GVGMRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIA 220

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           + +CAS+ + + G   H  VIK G      V  +I+DMY   G + EA K   +M +   
Sbjct: 221 VRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEK-D 279

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
            ++WN  IAG+ R+   E     FSQM     + + FT++S++ AC+   +L   +Q+H 
Sbjct: 280 LITWNTLIAGYERSDSIEPFF-IFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHG 338

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I +   + N+ + ++LI+ Y KCG+  D+++ FS+++  ++VSW SM+  Y  +G  ++
Sbjct: 339 GIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKE 398

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A+ LF++MV  GIRP    F+AVL ACSH+GLV  G +    M+ +Y I P +  Y C+V
Sbjct: 399 AVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVV 458

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           DLLGR G++E A   I ++P      +W  L  AC+ H+  ++ +  +K+ L L P+   
Sbjct: 459 DLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVE 518

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            YV LSN+YA  G   +A   RKLMK     K  G SWIEV N++Y F   NK  S    
Sbjct: 519 TYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVGNKMGSHKEW 578

Query: 686 VYEKLKQLMQQIEDIGHT 703
           VYE L+  +Q +++ G+ 
Sbjct: 579 VYEVLELPVQHMKEAGYV 596



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
            GR+ H  + K     D  VT S+++MY +CG +         M   D+ + N L+AGY 
Sbjct: 232 FGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGYE 291

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           ++    + F  F +++     PN +T+++++A C + +A+  G+Q+H    +        
Sbjct: 292 RSDSI-EPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLE 350

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           ++NAL+ MY KCG + D++  F  +   N++SWT+++ G+  HG  ++ + L   M   G
Sbjct: 351 LANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSG 410

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-----ALGDF-------VGTAIVD 362
           I P++  F   L +C+           HA ++ +G+      + D+       +   +VD
Sbjct: 411 IRPDQVVFMAVLHACS-----------HAGLVDQGLRYINCMINDYHIKPNQEIYGCVVD 459

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +    G + +A + ++ M   A    W A + 
Sbjct: 460 LLGRPGRVEDAYQLIRSMPFMADESVWGALLG 491



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/167 (19%), Positives = 73/167 (43%), Gaps = 2/167 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+ G++ H  I +  + G+  +  +L++MYAKCG+I        +M   ++ S   ++ G
Sbjct: 330 LQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIG 389

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLHAQTMKLQYLS 251
           Y  +    +A   F ++    ++P+   +  +L  C     +D+G + ++          
Sbjct: 390 YGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKP 449

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
              +   ++ +  + G +EDA  +   +    +   W A++   K H
Sbjct: 450 NQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAH 496


>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 178/573 (31%), Positives = 311/573 (54%), Gaps = 7/573 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           LE  +  HA I K+ +     +  SL+  YA  G I    A+       ++   N ++  
Sbjct: 17  LEALKSLHASILKSHL--HPHLCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRA 74

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           ++       +   + ++  + +Q  ++T+  +L  CG L+  + G + HA  +   Y S 
Sbjct: 75  FSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAHVVVFGYESD 134

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             V+N+L+ MY + G  + +  VFE + +RNV+SW++++  +  +G YE+ L L   M  
Sbjct: 135 VFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLN 194

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +GI PN  +   A+A    +   H    F   VI  G+     V  A + MY+  G I  
Sbjct: 195 EGIAPNRGSIVNAMAC---IHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDV 251

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A++    +      V+W + I  + +      A+E F QM       D  T  S++ A S
Sbjct: 252 ARRFFYGI-LDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTLLSLIHAVS 310

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L S      +H  I +S F++++ + +++I+ Y KCG+ E A + F +++A +++SW++
Sbjct: 311 NLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSARNLISWST 370

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI  Y  +G  R+A+ LF++M    I+P +  F+ VLSACSH GL+ +G + F++M +++
Sbjct: 371 MISGYGMHGHGREALCLFDQMKAS-IKPDHIAFVMVLSACSHGGLIAEGWECFKAMNRDF 429

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           G+ P   HY+CMVDLLGRAG+L  A  FI  +PI P A +W  L  ACR HS+L+ AE  
Sbjct: 430 GVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRIHSNLETAETA 489

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           ++ +  LD ++   Y+ LSN+YA +G + +A++ R LMK + + K  G + IE+ NK+Y 
Sbjct: 490 ARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHTIIEIKNKVYT 549

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           F + + S+ +   +Y +L++LM +I++ G+  +
Sbjct: 550 FVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPD 582



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 139/310 (44%), Gaps = 5/310 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C      ELG R HA +       D FV  SL+ MY + G       V ++MP  +
Sbjct: 106 LLKACGCLADFELGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERN 165

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S + ++  YA N  +++    F ++    + PN  +    +A        D+  ++  
Sbjct: 166 VVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGIAPNRGSIVNAMACIHREHEADDFCRV-- 223

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +     S  +V NA + MY +CG ++ A   F G++ +++++WT++I  + Q      
Sbjct: 224 -VIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPIN 282

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L   M+  GI P+  T    + + ++L +  +    H  + +        + TA++D
Sbjct: 283 ALELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVID 342

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y   G +  A+K    M  + + +SW+  I+G+  +    EA+  F QM +     D  
Sbjct: 343 LYVKCGNLEYARKCFDRM-SARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHI 400

Query: 423 TYSSILKACS 432
            +  +L ACS
Sbjct: 401 AFVMVLSACS 410



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/188 (17%), Positives = 84/188 (44%), Gaps = 3/188 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++   S     +L R  H +IT++       +  +++++Y KCG+++      
Sbjct: 298 DSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCF 357

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S + +++GY  +    +A   F ++    ++P+H  +  +L+ C     I 
Sbjct: 358 DRMSARNLISWSTMISGYGMHGHGREALCLFDQMKA-SIKPDHIAFVMVLSACSHGGLIA 416

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG +   A         +T     ++ +  + G + +A++  E + +  +   W A++  
Sbjct: 417 EGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGA 476

Query: 294 FKQHGDYE 301
            + H + E
Sbjct: 477 CRIHSNLE 484


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 181/533 (33%), Positives = 302/533 (56%), Gaps = 14/533 (2%)

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
           F  KL    +  +    S + AI  S +++     +HA+ +K    S   + + L++MY 
Sbjct: 127 FLGKLHNSSLLADSIVQSLVFAI-SSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYF 185

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFT 323
           K G  EDA+ +F+ +  R+++SW ++++G    G     L   C MR E G  PNE T  
Sbjct: 186 KLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLL 245

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
             +++CA +     G   H  V+K GM+    V  ++++MY  LG + +A  QL E    
Sbjct: 246 SVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL-DAASQLFEEMPV 304

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
            S VSWN+ +     N   E+ ++ F+ M R     D+ T  ++L+AC+        E I
Sbjct: 305 RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 364

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H+ I +  F +++ + ++L+  Y K G    +E +F ++   D ++W +M+  Y+ +   
Sbjct: 365 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACG 424

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           R+AI LF+ MV EG+   + TF  +LSACSHSGLV++G+K FE M + Y + P   HYSC
Sbjct: 425 REAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSC 484

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
           MVDLLGR+G+LE A   I ++P++P++ +W  L  ACR + ++++ + +++Q+L LDP D
Sbjct: 485 MVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSD 544

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
              Y+ LSN+Y+ AGL   A + R LMK + +++ PGCS+IE  NKI+RF   ++ H   
Sbjct: 545 HRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRS 604

Query: 684 PKVYEKLKQLMQQIEDIG---------HTDNE--KEDRVLYHSERLAVGFGLI 725
            +++ KL++L+++I + G         H  +E  K D +  HSE+LA+ FGL+
Sbjct: 605 DEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLL 657



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 199/427 (46%), Gaps = 44/427 (10%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +SYCS           HA + K+    D F+   LV+MY K G  +    +  +MP  D+
Sbjct: 155 VSYCSA---------IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDL 205

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDG-IDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
            S N L++G +         + F ++      QPN  T  ++++ C  + A+DEGK LH 
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHG 265

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL    K  V N+L+ MY K G ++ A  +FE +  R+++SW +++     +G  EK
Sbjct: 266 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 325

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L  LM+  GI+P++ T    L +C            HA + + G      + TA+++
Sbjct: 326 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 385

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           +Y+ LG +  A + + E  K   +++W A +AG+  +    EAI+ F  MV+     D  
Sbjct: 386 LYAKLGRL-NASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHV 444

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T++ +L ACS           HS +V+         G    E  +      +  RV  +L
Sbjct: 445 TFTHLLSACS-----------HSGLVEE--------GKKYFEIMS------EVYRVEPRL 479

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
                  ++ M+    ++GR   A  L + M +E   P++  + A+L AC   G V+ G+
Sbjct: 480 D-----HYSCMVDLLGRSGRLEDAYELIKSMPME---PSSGVWGALLGACRVYGNVELGK 531

Query: 543 KVFESMV 549
           +V E ++
Sbjct: 532 EVAEQLL 538



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 141/307 (45%), Gaps = 15/307 (4%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S C+    L+ G+  H ++ K  + G   V  SL+NMY K G + +   + ++MP
Sbjct: 244 LLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 303

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++  +  N   ++    F  +    + P+  T   +L  C       + + 
Sbjct: 304 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 363

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA   +  + +   ++ ALL +Y K G +  +E +FE +  R+ I+WTA++ G+  H  
Sbjct: 364 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHAC 423

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG--------YMFHAQVIKRGMA 351
             + ++L  LM ++G++ +  TFT  L++C     SH G        +   ++V +    
Sbjct: 424 GREAIKLFDLMVKEGVEVDHVTFTHLLSAC-----SHSGLVEEGKKYFEIMSEVYRVEPR 478

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  +  + +VD+    G + +A + +K M    SS  W A +         E   E   Q
Sbjct: 479 LDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQ 536

Query: 412 MVRNDAA 418
           ++  D +
Sbjct: 537 LLSLDPS 543



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 6/249 (2%)

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N  T   +  F   + N +   +    S++ A S   S++ C  IH+R++KS   S+  +
Sbjct: 117 NDSTRTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFI 176

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-G 517
           G  L+  Y K G  EDA+R+F ++   D+VSWNS++   S  G     +  F +M  E G
Sbjct: 177 GDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESG 236

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            +P   T L+V+SAC+  G + +G+ +   +VK  G+  +    + ++++ G+ G L+ A
Sbjct: 237 RQPNEVTLLSVVSACAXMGALDEGKSLHGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAA 295

Query: 578 LIFISNLPIKPTAPIWRPLFAA--CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
                 +P++     W  +        +++  M  F   +   ++PD A + V L     
Sbjct: 296 SQLFEEMPVRSLVS-WNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATM-VALLRACT 353

Query: 636 EAGLQADAE 644
           + GL   AE
Sbjct: 354 DTGLGRQAE 362



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIF----NGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSN 102
           +A QLF + P R+ +S + ++     NGY    EKG+       R    PD         
Sbjct: 294 AASQLFEEMPVRSLVSWNSMVVIHNHNGY---AEKGMDLFNLMKRAGINPD--------- 341

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY 162
                         +  ++ +L  C+           HA I +     D  +  +L+N+Y
Sbjct: 342 --------------QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLY 387

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           AK G + +   + +++   D  +   +LAGYA +A   +A   F  +    V+ +H T++
Sbjct: 388 AKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 447

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL- 279
            +L+ C     ++EGK+ + + M   Y  +  + +   ++ +  + G +EDA  + + + 
Sbjct: 448 HLLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 506

Query: 280 VQRNVISWTAIINGFKQHGDYE 301
           ++ +   W A++   + +G+ E
Sbjct: 507 MEPSSGVWGALLGACRVYGNVE 528


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 178/516 (34%), Positives = 294/516 (56%), Gaps = 13/516 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S ++    + S+I   + LH + +K    +   + + L++ Y++ G  +DA  +F+ L  
Sbjct: 42  SALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPD 101

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYM 340
           ++++SW ++I+GF +  D    L L+  MR E G+ PNE T    +++CA +    +G  
Sbjct: 102 KDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKC 161

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   +K GM L   V  +++++Y   G + EA   L E     S VSWN+ +A      
Sbjct: 162 IHGIAVKSGMLLEVKVVNSLINLYGKCGCL-EAACCLFEGMSVQSLVSWNSMVAVHVHMG 220

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             E+ I  F  M R     D+ T  S+L AC  L      E +H  I+    + N+ + +
Sbjct: 221 LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +L++ Y K G+  D+ +VF  +   D V+W +M+ +Y+ +GR R+AI  FE MV EG+ P
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVP 340

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + TF  +LSACSHSGLV++G+  F+ M + YG+     HYSCMVDLLGR+G L  A   
Sbjct: 341 DHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKL 400

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I ++P++P + +W  L  ACR   ++++ + +++++  LDP D+  Y+TLSNMY+ AG  
Sbjct: 401 IKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQW 460

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            DA + R LMK + + + PGCS+IE  NKI+ F   ++SH +  ++Y KL++L+++  ++
Sbjct: 461 RDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREV 520

Query: 701 G---------HTDNE--KEDRVLYHSERLAVGFGLI 725
           G         H  +E  KED +  HSE+LA+ FGL+
Sbjct: 521 GFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLL 556



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 135/283 (47%), Gaps = 15/283 (5%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI V+S C+    L++G+  H +  K+ +  +  V  SL+N+Y KCG +++   + + M 
Sbjct: 143 VIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMS 202

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++A +    L ++   +F+ +    +  +  T  ++L  C +L      + 
Sbjct: 203 VQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEA 262

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +        A++ ALL +Y K G + D+  VF G++  + ++WTA+++ +  HG 
Sbjct: 263 VHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGR 322

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-- 357
             + +    LM  +G+ P+  TFT  L++C     SH G +   +   + M   +F G  
Sbjct: 323 GREAIEHFELMVREGVVPDHVTFTHLLSAC-----SHSGLVEEGKNYFKIMY--EFYGVE 375

Query: 358 ------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
                 + +VD+    G + +A K +K M    +S  W A I 
Sbjct: 376 LRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIG 418



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 85/194 (43%), Gaps = 14/194 (7%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  V+ +L  C      +L    H  I    + G+  +  +L+++YAK G +     V 
Sbjct: 240 DQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVF 299

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M   D  +   +L+ YA +    +A   F  +    V P+H T++ +L+ C     ++
Sbjct: 300 GGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVE 359

Query: 236 EGK-------QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISW 287
           EGK       + +   +++++ S       ++ +  + G + DA  + + + ++ N   W
Sbjct: 360 EGKNYFKIMYEFYGVELRVEHYS------CMVDLLGRSGHLNDAYKLIKSMPMEPNSGVW 413

Query: 288 TAIINGFKQHGDYE 301
            A+I   +  G+ E
Sbjct: 414 GALIGACRVRGNIE 427


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 204/664 (30%), Positives = 342/664 (51%), Gaps = 44/664 (6%)

Query: 120 VIEVLSYCSR-EECLELGRRYHALITKTAVC-GDQ-FVTASLVNMYAKCG---DIKSMVA 173
           ++ VL  CS   E L LGR  HA   K     GD+ F   +L++MYA+ G   D + +  
Sbjct: 165 LVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFG 224

Query: 174 VVKQM--PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            V     P   + + N +++   ++    +A      +    V+P+  T+++ L  C  L
Sbjct: 225 SVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQL 284

Query: 232 SAIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWT 288
             +  G+++HA  +K   L+  + V++AL+ MY     +  A  VF+ +    R +  W 
Sbjct: 285 EMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWN 344

Query: 289 AIINGFKQHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           A++ G+ Q G  E+ L L   M  E G+ P+E T    L +CA           H  V+K
Sbjct: 345 AMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLK 404

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
           RGMA   FV  A++D+Y+ LG++ EA + +    +    VSWN  I G        +A +
Sbjct: 405 RGMADNPFVQNALMDLYARLGDM-EAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463

Query: 408 AFSQMVRND-----------AACDE-------FTYSSILKACSLLPSLATCEQIHSRIVK 449
              +M +             A  DE        T  ++L  C++L + A  ++IH   ++
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR 523

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
              +S++ VGS+L++ Y KCG    +  VF +L   +V++WN +I AY  +G   +AI L
Sbjct: 524 HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIAL 583

Query: 510 FEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           F++MV+    +P   TF+A L+ACSHSG+V  G ++F SM + +G+ P    ++C VD+L
Sbjct: 584 FDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDIL 643

Query: 569 GRAGKLEIALIFISNL-PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
           GRAG+L+ A   I+++ P +     W     ACR H ++ + E  ++++ +L+PD+A+ Y
Sbjct: 644 GRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHY 703

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
           V L N+Y+ AGL   + E R  M+ + +SKEPGCSWIE+   I+RF +   +H E   V+
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVH 763

Query: 688 EKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECS 736
             +  L +++ + G+T           ++EK   + YHSE+LA+ FGL+  P       +
Sbjct: 764 AHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVA 823

Query: 737 RTLE 740
           + L 
Sbjct: 824 KNLR 827



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 221/483 (45%), Gaps = 37/483 (7%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V  +L+  YA+CGD+ + +A+   MP  D  + N L+A      LF +       L  + 
Sbjct: 98  VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAAL---CLFRRWLPALDALRDML 154

Query: 214 VQPNHYTYSTMLAICGSLSAIDE----GKQLHAQTMKLQYL--SKTAVSNALLTMYIKCG 267
           ++ +  +  T++++  + S + E    G++ HA  +K  +L   +    NALL+MY + G
Sbjct: 155 LEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLG 214

Query: 268 MMEDAESVFEGLVQRN-----VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           +++DA+ +F  +   +     V++W  +++   Q G   + + ++  M   G+ P+  TF
Sbjct: 215 LVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITF 274

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
             AL +C+ L    +G   HA V+K   +A   FV +A+VDMY+    +  A++    + 
Sbjct: 275 ASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVP 334

Query: 382 KSASSVS-WNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLAT 439
                +  WNA + G+ +    EEA+E F++M         E T + +L AC+   + A 
Sbjct: 335 GGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAG 394

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            E +H  ++K     N  V ++L++ Y + G  E A  +F+ +   DVVSWN++I     
Sbjct: 395 KEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVV 454

Query: 500 NGRARKAIILFEKMVVEG------------------IRPTNSTFLAVLSACSHSGLVQDG 541
            G    A  L  +M  +G                  + P N T + +L  C+       G
Sbjct: 455 QGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKG 514

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +++    ++ + +  + A  S +VD+  + G L ++      LP K     W  L  A  
Sbjct: 515 KEIHGYAMR-HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP-KRNVITWNVLIMAYG 572

Query: 602 CHS 604
            H 
Sbjct: 573 MHG 575



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 185/399 (46%), Gaps = 19/399 (4%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS--KTAVSNALLTMYIKCGMMEDAES 274
           +H+          +L ++   + +H   ++   L     AV+NALLT Y +CG +  A +
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL-R 333
           +F  +  R+ +++ ++I        +   L  +  M  +G   + +T    L +C+ L  
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 334 NSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS----V 387
           +  +G   HA  +K G   GD  F   A++ MY+ LG + +A+     +  + S     V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           +WN  ++   ++ +  EAIE    MV      D  T++S L ACS L  L+   ++H+ +
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 448 VK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRAR 504
           +K S   +N  V S+L++ Y        A RVF  +      +  WN+M+  Y+Q G   
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 505 KAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           +A+ LF +M  E G+ P+ +T   VL AC+ S     G++     V + G+       + 
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETFA-GKEAVHGYVLKRGMADNPFVQNA 416

Query: 564 MVDLLGRAGKLEIA-LIFISNLPIKPTAPI-WRPLFAAC 600
           ++DL  R G +E A  IF +   I+P   + W  L   C
Sbjct: 417 LMDLYARLGDMEAARWIFAA---IEPRDVVSWNTLITGC 452


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 184/573 (32%), Positives = 312/573 (54%), Gaps = 22/573 (3%)

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S N L+    K     QA    L++   +  P+  TY  ++  CG  S++ +G ++H   
Sbjct: 48  SNNQLIQSLCKEGKLKQA----LRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHI 103

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           +         ++  L+ MY   G ++ A  VF+   +R +  W A+       G  E+ L
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163

Query: 305 RLVCLMREDGIDPNEYTFTVALASCAS--LRNSHM--GYMFHAQVIKRGMALGDFVGTAI 360
            L   M   G++ + +T+T  L +C +      H+  G   HA + +RG     ++ T +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTL 223

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR--NDAA 418
           VDMY+  G +  A      M    + VSW+A IA + +N K  EA+  F +M+    D++
Sbjct: 224 VDMYARFGCVDYASYVFNGM-PVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSS 282

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +  T  S+L+AC+ L +L     IH  I++   +S + V S+L+  Y +CG  +  +RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRV 342

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   DVVSWNS+I +Y  +G  RKAI +FE+M+  G  PT  TF++VL ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+++FESM +++GI P+  HY+CMVDLLGRA +L+ A   + ++  +P   +W  L  
Sbjct: 403 EEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H ++++AE  S+++  L+P +A  YV L+++YAEA +  + +  +KL++ + + K 
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EK 707
           PG  W+EV  K+Y F S ++ +  M +++  L +L + +++ G+              EK
Sbjct: 523 PGRCWMEVRRKMYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           E  VL HSE+LA+ FGLI+         ++ L 
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLR 615



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 7/312 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L  G R H  I       D F+   L+ MY+  G +     V  +     I   
Sbjct: 87  CGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC----GSLSAIDEGKQLHA 242
           N L          ++    + K++ I V+ + +TY+ +L  C     +   + +GK++HA
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHA 206

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +  Y S   +   L+ MY + G ++ A  VF G+  RNV+SW+A+I  + ++G   +
Sbjct: 207 HLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 303 PLRLVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            LR    M  +  D  PN  T    L +CASL     G + H  +++RG+     V +A+
Sbjct: 267 ALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISAL 326

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V MY   G++   ++    M      VSWN+ I+ +  +    +AI+ F +M+ N A+  
Sbjct: 327 VTMYGRCGKLDVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPT 385

Query: 421 EFTYSSILKACS 432
             T+ S+L ACS
Sbjct: 386 PVTFVSVLGACS 397



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 17/284 (5%)

Query: 123 VLSYCSREEC----LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           VL  C   EC    L  G+  HA +T+       ++  +LV+MYA+ G +     V   M
Sbjct: 184 VLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGM 243

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  ++ S + ++A YAKN    +A   F ++  +  D  PN  T  ++L  C SL+A+++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQ 303

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G+ +H   ++    S   V +AL+TMY +CG ++  + VF+ +  R+V+SW ++I+ +  
Sbjct: 304 GRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGV 363

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG   K +++   M  +G  P   TF   L +C     SH G +   + +   M     +
Sbjct: 364 HGYGRKAIQIFEEMLANGASPTPVTFVSVLGAC-----SHEGLVEEGKRLFESMWRDHGI 418

Query: 357 GTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              +      VD+      + EA K +++M        W + + 
Sbjct: 419 KPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 4/185 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    LE GR  H  I +  +     V ++LV MY +CG +     V  +M 
Sbjct: 288 MVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMH 347

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S N L++ Y  +    +A   F ++      P   T+ ++L  C     ++EGK+
Sbjct: 348 DRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 240 LHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
           L  ++M   +  K  V +   ++ +  +   +++A  + + +  +     W +++   + 
Sbjct: 408 LF-ESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466

Query: 297 HGDYE 301
           HG+ E
Sbjct: 467 HGNVE 471


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 182/523 (34%), Positives = 288/523 (55%), Gaps = 16/523 (3%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + +T + +L     L  +   + L     K   +S     N L+   IK G +  A  +F
Sbjct: 76  DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMS----WNILIGGCIKNGDLGSARELF 131

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  RNV +W A++ G    G  E  L+    MR +G+ P+E+        CA L +  
Sbjct: 132 DKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVV 191

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   HA V++ GM     VG ++  MY   G + E +  L+ +  S + VS+N  IAG 
Sbjct: 192 SGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRAL-PSLTIVSFNTTIAGR 250

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            +N  +E A+E FS M   + A D  T+ S +  CS L +LA  +Q+H++++K+  +  V
Sbjct: 251 TQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVV 310

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            V +SL+  Y++CG   D+ERV+      D+   ++MI A   +G+  KA+ LF++M+  
Sbjct: 311 PVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQMMNG 370

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G  P   TFLA+L ACSHSGL  +G + FE M K YG  P   HY+C+VDLLGR+G L+ 
Sbjct: 371 GAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDE 430

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A   I ++P++    IW+ L +AC+   +  MAE I+++++E DP D+A YV LSN+ A 
Sbjct: 431 AEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSNIRAT 490

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
           +    D  E RK+M+ K+I KEPG SW+E   ++++F + +KSH    ++ E LK++M +
Sbjct: 491 SKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKEMMGK 550

Query: 697 IEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
           I   G+            D EKE  + +HSE+LA+ F  ++LP
Sbjct: 551 IRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLP 593



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 164/342 (47%), Gaps = 5/342 (1%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           L+    K GD+ S   +  +MP  ++A+ N ++AG     L + +  FFL +    + P+
Sbjct: 114 LIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPD 173

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            +   ++   C  L  +  G+Q+HA  ++    S   V N+L  MY++CG + + E+V  
Sbjct: 174 EFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLR 233

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
            L    ++S+   I G  Q+GD E  L    +MR   + P+  TF  A++ C+ L     
Sbjct: 234 ALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQ 293

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-GKSASSVSWNAQIAGF 396
           G   HAQVIK G+     V T++V MYS  G + ++++      G     +S      GF
Sbjct: 294 GQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGF 353

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESN 455
             + +  +A+E F QM+   A  +E T+ ++L ACS         +    + K+  F+ +
Sbjct: 354 --HGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPS 411

Query: 456 VHVGSSLIEAYNKCGSWEDAER-VFSQLTAADVVSWNSMIKA 496
           V   + +++   + G  ++AE  + S    AD V W +++ A
Sbjct: 412 VKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA 453



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 169/370 (45%), Gaps = 28/370 (7%)

Query: 47  SACQLFNKSPKRAGLSTSDLIFNGYMNI--EEKGISRNGYSTRNDSFPDGFIDDGCSNTV 104
           SA +LF+K P R  ++T + +  G  N+  +E  +       R    PD F       +V
Sbjct: 126 SARELFDKMPTR-NVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEF----GLGSV 180

Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
              C  L         ++V+S          GR+ HA + ++ +  D  V  SL +MY +
Sbjct: 181 FRCCAGL---------LDVVS----------GRQVHAYVVRSGMDSDMCVGNSLAHMYMR 221

Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
           CG +    AV++ +P L I S N  +AG  +N   + A  +F  + G++V P+  T+ + 
Sbjct: 222 CGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSA 281

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           ++ C  L+A+ +G+Q+HAQ +K        V  +L+ MY +CG + D+E V++G    ++
Sbjct: 282 ISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDL 341

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
              +A+I+    HG   K + L   M   G +PNE TF   L +C+       G  F   
Sbjct: 342 FLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFEL 401

Query: 345 VIKR-GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           + K  G          IVD+    G + EA+  +  M   A  V W   ++   + QK  
Sbjct: 402 MTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSA-CKTQKNF 460

Query: 404 EAIEAFSQMV 413
           +  E  ++ V
Sbjct: 461 DMAERIAERV 470


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 185/630 (29%), Positives = 318/630 (50%), Gaps = 45/630 (7%)

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF-DQAFSFFLKLDGIDV 214
           AS++  + +         V  + P          ++G A+   + D   +F   L   + 
Sbjct: 49  ASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEA 108

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
            PN +  + ++  C  +  ++ GK++H   ++        + NA+L MY KCG  E A  
Sbjct: 109 TPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARR 168

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDY--------EKPLR--------LVCLMR------- 311
           VF  + +R+ +SW   I    Q GD         E PLR        +  LMR       
Sbjct: 169 VFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADA 228

Query: 312 --------EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
                   + G+  N YT++ A      L    +G   H +V+   +    FV ++++DM
Sbjct: 229 LSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDM 288

Query: 364 YSGLGEIWEAKKQLKEMGKSASSV--SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           Y   G +  A             +  +W+  +AG+ +N + EEA++ F +M+R   A D 
Sbjct: 289 YCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADR 348

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           FT +S+  AC+ +  +    Q+H  + K  ++ +  + S++++ Y KCG+ EDA  +F +
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDR 408

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
               ++  W SM+ +Y+ +G+ R AI LFE+M  E + P   T + VLSACSH GLV +G
Sbjct: 409 ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEG 468

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  F+ M +EYGI+P   HY+C+VDL GR+G L+ A  FI    I   A +W+ L +ACR
Sbjct: 469 ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACR 528

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H   + A+  S+++++L+  DA  YV LSN+YA      D  E R  M+ +++ K+PG 
Sbjct: 529 LHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGR 588

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDR 710
           SWI + N ++ F + + SH +  ++Y  L++L++++++IG+T           D ++E  
Sbjct: 589 SWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETA 648

Query: 711 VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           + +HSE+LA+ FG+IS P+       + L 
Sbjct: 649 LKFHSEKLAIAFGIISTPSGTPLRIFKNLR 678



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 35/344 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC----------------- 165
           V+  C+    +E G+R H  + +  V  D  +  ++++MYAKC                 
Sbjct: 118 VVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERD 177

Query: 166 --------------GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
                         GDI   + +  + P  D  S N +++G  ++     A S   ++  
Sbjct: 178 AVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQ 237

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
             V  NHYTYST   + G L   D G+QLH + +         V ++L+ MY KCG++E 
Sbjct: 238 AGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEA 297

Query: 272 AESVFEG---LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           A SVF+    L +    +W+ ++ G+ Q+G  E+ L L   M  +G+  + +T T   A+
Sbjct: 298 AASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAA 357

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CA++     G   H  V K    L   + +AIVDMY+  G + +A+           +V 
Sbjct: 358 CANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAV- 416

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           W + +  +  + +   AIE F +M       +E T   +L ACS
Sbjct: 417 WTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACS 460



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 154/295 (52%), Gaps = 5/295 (1%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIA-SCNCLL 190
           +LGR+ H  +   A+ GD FV +SL++MY KCG +++  +V      L  D+  + + ++
Sbjct: 261 DLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMV 320

Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           AGY +N   ++A   F ++    V  + +T +++ A C ++  +++G+Q+H    KL Y 
Sbjct: 321 AGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYK 380

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
               +++A++ MY KCG +EDA S+F+    +N+  WT+++  +  HG     + L   M
Sbjct: 381 LDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERM 440

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGE 369
             + + PNE T    L++C+ +     G ++  Q+ +  G+         IVD+Y   G 
Sbjct: 441 TAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGL 500

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           + +AK  ++E   +  ++ W   ++    +Q  E A  A  ++V+ +  CD  +Y
Sbjct: 501 LDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLE-QCDAGSY 554



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  V + C+    +E GR+ H  + K     D  + +++V+MYAKCG+++   ++ 
Sbjct: 347 DRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIF 406

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +    +IA    +L  YA +     A   F ++    + PN  T   +L+ C  +  + 
Sbjct: 407 DRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVS 466

Query: 236 EGKQLHAQTMKLQYLSKTAVS--NALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIIN 292
           EG +L+ + M+ +Y    ++   N ++ +Y + G+++ A++ + E  +    I W  +++
Sbjct: 467 EG-ELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLS 525

Query: 293 G--FKQHGDYEK 302
                QH +Y K
Sbjct: 526 ACRLHQHNEYAK 537



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 8/205 (3%)

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           ++++  +  H  +S++  + +   + DA  VF +        W   I   ++ GR    +
Sbjct: 37  LEARLATVPHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGM 96

Query: 508 ILFEKMVVEGIRPTNSTFL-AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
             F +M+ EG    N+  L AV+  C+  G V+ G++V   M++  G+  +    + ++D
Sbjct: 97  RAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRN-GVHLDVVLCNAVLD 155

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAA 625
           +  + G+ E A      +  +  A  W     AC    D+      S Q+ +  P  D  
Sbjct: 156 MYAKCGQFERARRVFGAMA-ERDAVSWNIAIGACIQSGDI----LGSMQLFDESPLRDTT 210

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLM 650
            + T+ +    +G  ADA    + M
Sbjct: 211 SWNTIISGLMRSGHAADALSHLRRM 235


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 183/507 (36%), Positives = 287/507 (56%), Gaps = 14/507 (2%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I++   +HAQ ++  +     +   LL    KC  ++ A  +F+     NV  +TA+I+G
Sbjct: 45  INQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDG 104

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F   G+Y   ++L   M  D I P+ Y     L +C S      G   H++ +K G++  
Sbjct: 105 FVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSN 164

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGK---SASSVSWNAQIAGFFRNQKTEEAIEAFS 410
             V   I+++Y   GE+ +A++  +EM +   +  +V W A I GF RN++   A+EAF 
Sbjct: 165 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFR 224

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M   +   +EFT   +L ACS L +L     +HS + K + E N+ VG++LI  Y++CG
Sbjct: 225 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCG 284

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S ++A+ VF ++   DV+++N+MI   S NG++R+AI LF  M+   +RPTN TF+ VL+
Sbjct: 285 SIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLN 344

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSH GLV  G K+F SM ++YG+ P+  HY CMVDLLGR G+LE A   I  + + P  
Sbjct: 345 ACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDH 404

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +   L +AC+ H +L++ E ++K + +    D+  YV LS++YA +G   +A + R  M
Sbjct: 405 IMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKM 464

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-------- 702
           K   + KEPGCS IEV N+I+ F   +  H    ++YEKL++L + +   G+        
Sbjct: 465 KEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVL 524

Query: 703 ---TDNEKEDRVLYHSERLAVGFGLIS 726
               D EKE  +  HSERLA+ +GLIS
Sbjct: 525 QDIEDGEKEWALAIHSERLAICYGLIS 551



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 167/336 (49%), Gaps = 12/336 (3%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           SN+ P    SL+SL  KQ    ++S   R + +      HA + +     D F+   L+ 
Sbjct: 20  SNSNP---KSLKSLDQKQ----IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLR 72

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
             +KC  I     + +     ++     L+ G+  +  +  A   + ++    + P++Y 
Sbjct: 73  SCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYL 132

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---- 276
            +++L  CGS  A+ EG+++H++ +KL   S   V   ++ +Y KCG + DA  VF    
Sbjct: 133 MASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMP 192

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           E +V ++ + WTA+I+GF ++ +  + L     M+ + + PNE+T    L++C+ L    
Sbjct: 193 EDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE 252

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H+ + K  + L  FVG A+++MYS  G I EA+    EM K    +++N  I+G 
Sbjct: 253 IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM-KDRDVITYNTMISGL 311

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             N K+ +AIE F  M+         T+  +L ACS
Sbjct: 312 SMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACS 347



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/402 (22%), Positives = 178/402 (44%), Gaps = 46/402 (11%)

Query: 93  DGFIDDGCSNTVPVTCYSL---ESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
           DGF+  G +    +  YS    +S+L D   +  +L  C  +  L  GR  H+   K  +
Sbjct: 103 DGFVSSG-NYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGL 161

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMP----YLDIASCNCLLAGYAKNALFDQAFS 204
             ++ V   ++ +Y KCG++     V ++MP      D      ++ G+ +N   ++A  
Sbjct: 162 SSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALE 221

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F  + G +V+PN +T   +L+ C  L A++ G+ +H+   K +      V NAL+ MY 
Sbjct: 222 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 281

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           +CG +++A++VF+ +  R+VI++  +I+G   +G   + + L  +M    + P   TF  
Sbjct: 282 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVG 341

Query: 325 ALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
            L +C+       G+ +FH+     G+         +VD+   +G + EA   ++ M  +
Sbjct: 342 VLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMT 401

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
                                               D     ++L AC +  +L   EQ+
Sbjct: 402 P-----------------------------------DHIMLGTLLSACKMHKNLELGEQV 426

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
            +++++ + +++      L   Y   G W++A +V +++  A
Sbjct: 427 -AKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEA 467



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 127/284 (44%), Gaps = 17/284 (5%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           KS  S+     I+   R++   + +   +Q++RN  + D F    +L++CS       C 
Sbjct: 25  KSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS------KCH 78

Query: 442 QIH--SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN----SMIK 495
            I   SRI +     NV++ ++LI+ +   G++ DA +++S++    ++  N    S++K
Sbjct: 79  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILK 138

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           A       R+   +  + +  G+       L ++      G + D ++VFE M ++  + 
Sbjct: 139 ACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV-VA 197

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLP---IKPTAPIWRPLFAACRCHSDLKMAEFI 612
            +   ++ M+D   R  ++  AL     +    ++P       + +AC     L++  ++
Sbjct: 198 KDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 257

Query: 613 SKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
              + + + + +  V   L NMY+  G   +A+     MK +++
Sbjct: 258 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV 301


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 191/575 (33%), Positives = 315/575 (54%), Gaps = 15/575 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L+LG  Y           D FV +S ++MYA+ G +     V            N ++ G
Sbjct: 127 LKLGNEY---------ANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGG 177

Query: 193 YAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
           + +N  F +    FL+ +       +  T+ + L     L  +  G+Q+HA TMK   + 
Sbjct: 178 HIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVL 237

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V NA+L MY +C  ++ +  VFE + +++V+SW  +I+GF Q+G  E+ L LV  M+
Sbjct: 238 SVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQ 297

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           + G   +  T T  L++ ++LRN  +G   HA +I+ G+   D + + ++DMY+  G I 
Sbjct: 298 KQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKF-DGMDSYLIDMYAKSGLIR 356

Query: 372 EAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            +++  +    ++    +WNA IAG+ +N   E+A   F  M+  +   +  T +SIL A
Sbjct: 357 ISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPA 416

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           CS L S+   +Q+H   ++   + N+ V ++L++ Y+K G+   AE VF+Q +  + V++
Sbjct: 417 CSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTY 476

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +MI  Y Q+G    A+ LF  M   GI+P   TF+AVLSACS++GLV +G ++FESM +
Sbjct: 477 TTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKR 536

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP-TAPIWRPLFAACRCHSDLKMA 609
           ++ I P  AHY C+ D+LGR G++  A  F+  L  +     IW  L  ACR H  +++ 
Sbjct: 537 DFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELG 596

Query: 610 EFISKQILELDPDD--AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           E +S ++LE++  D  A   V LSNMYAE       ++ RK M+ K + KE GCSWI+  
Sbjct: 597 EEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWIDTG 656

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
             + RF S++K H+   ++YE L++L  ++ED  H
Sbjct: 657 GLLVRFVSKDKDHTRCEEIYEMLERLAMEMEDNDH 691



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 162/323 (50%), Gaps = 4/323 (1%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            ++LD    +  L+  S+ +CL LG++ HA   K        V  +++ MY++C  +++ 
Sbjct: 199 HTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTS 258

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V ++MP  D+ S N +++G+ +N L ++      ++       +  T +++L+   +L
Sbjct: 259 FEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNL 318

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE--GLVQRNVISWTA 289
              + GKQ HA  ++   +    + + L+ MY K G++  ++ VFE   +  R+  +W A
Sbjct: 319 RNREIGKQTHAYLIR-HGIKFDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNA 377

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I G+ Q+G  E+      LM E  + PN  T    L +C+SL + ++G   H   I+  
Sbjct: 378 VIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYS 437

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +    FV TA+VDMYS  G I  A+    +     +SV++   I G+ ++   E A+  F
Sbjct: 438 LDQNIFVRTALVDMYSKSGAINYAESVFTQ-SSERNSVTYTTMILGYGQHGMGENALSLF 496

Query: 410 SQMVRNDAACDEFTYSSILKACS 432
             M ++    D  T+ ++L ACS
Sbjct: 497 HSMKKSGIQPDAITFVAVLSACS 519



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 196/411 (47%), Gaps = 12/411 (2%)

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V K M   D+ + N +++ Y K   + +A   F  +    ++P+  ++  +     S+  
Sbjct: 56  VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGD 115

Query: 234 IDEGKQLHAQTMKL--QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
                 L+   +KL  +Y +   V ++ ++MY + G ++    VF+  ++++   W  +I
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175

Query: 292 NGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
            G  Q+  + + + L    M+ +    ++ TF  AL + + L+   +G   HA  +K   
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
            L   V  AI+ MYS    +  + +  ++M +    VSWN  I+GF +N   EE +    
Sbjct: 236 VLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEK-DVVSWNTMISGFIQNGLDEEGLMLVY 294

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS--KFESNVHVGSSLIEAYNK 468
           +M +     D  T +S+L A S L +    +Q H+ +++   KF+    + S LI+ Y K
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG---MDSYLIDMYAK 351

Query: 469 CGSWEDAERVF--SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            G    ++RVF  + +   D  +WN++I  Y+QNG   +A I F  M+ + +RP   T  
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLA 411

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           ++L ACS  G +  G+++    ++ Y +       + +VD+  ++G +  A
Sbjct: 412 SILPACSSLGSINLGKQLHGVSIR-YSLDQNIFVRTALVDMYSKSGAINYA 461



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 90/183 (49%), Gaps = 5/183 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  CS    + LG++ H +  + ++  + FV  +LV+MY+K G I    +V  Q    +
Sbjct: 413 ILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERN 472

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +   ++ GY ++ + + A S F  +    +QP+  T+  +L+ C     +DEG ++  
Sbjct: 473 SVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIF- 531

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVIS-WTAIINGFKQHG 298
           ++MK  +  + + ++   +  M  + G + +A    + L +  +VI  W +++   + HG
Sbjct: 532 ESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHG 591

Query: 299 DYE 301
             E
Sbjct: 592 HIE 594



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%)

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
            +VF  +   DV++WN+M+  Y +  R  +AI  F  M+  GI+P+  +F+ V  A S  
Sbjct: 54  HKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSV 113

Query: 536 GLVQDGQKVFESMVK 550
           G  ++   ++  ++K
Sbjct: 114 GDFKNANVLYGMLLK 128


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 174/498 (34%), Positives = 290/498 (58%), Gaps = 13/498 (2%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA+ +K    S   + + L++MY K G  EDA+ +F+ +  ++++SW ++++G    G 
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200

Query: 300 YEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
               L   C MR E G  PNE T    +++CA +     G   H  V+K GM+    V  
Sbjct: 201 LGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVN 260

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           ++++MY  LG + +A  QL E     S VSWN+ +     N   E+ ++ F+ M R    
Sbjct: 261 SLINMYGKLGFL-DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 319

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D+ T  ++L+AC+        E IH+ I +  F +++ + ++L+  Y K G    +E +
Sbjct: 320 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 379

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   D ++W +M+  Y+ +   R+AI LF+ MV EG+   + TF  +LSACSHSGLV
Sbjct: 380 FEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 439

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+K FE M + Y + P   HYSCMVDLLGR+G+LE A   I ++P++P++ +W  L  
Sbjct: 440 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 499

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR + ++++ + +++Q+L LDP D   Y+ LSN+Y+ AGL  DA + R LMK + +++ 
Sbjct: 500 ACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRN 559

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG---------HTDNE--K 707
           PGCS+IE  NKI+RF   ++ H    +++ KL++L+++I + G         H  +E  K
Sbjct: 560 PGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVK 619

Query: 708 EDRVLYHSERLAVGFGLI 725
            D +  HSE+LA+ FGL+
Sbjct: 620 VDMINKHSEKLAIAFGLL 637



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 24/360 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S C+    L+ G+  H ++ K  + G   V  SL+NMY K G + +   + ++MP
Sbjct: 224 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 283

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
              + S N ++  +  N   ++    F  +    + P+  T   +L  C       + + 
Sbjct: 284 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 343

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA   +  + +   ++ ALL +Y K G +  +E +FE +  R+ I+WTA++ G+  H  
Sbjct: 344 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHAC 403

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG--------YMFHAQVIKRGMA 351
             + ++L  LM ++G++ +  TFT  L++C     SH G        +   ++V +    
Sbjct: 404 GREAIKLFDLMVKEGVEVDHVTFTHLLSAC-----SHSGLVEEGKKYFEIMSEVYRVEPR 458

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           L  +  + +VD+    G + +A + +K M    SS  W A +         E   E   Q
Sbjct: 459 LDHY--SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQ 516

Query: 412 MVRNDAACDEFTY---SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           ++  D + D   Y   S+I  A  L    +   ++ + + + +   N   G S IE  NK
Sbjct: 517 LLSLDPS-DHRNYIMLSNIYSAAGLWRDAS---KVRALMKERRLTRN--PGCSFIEHGNK 570



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 6/222 (2%)

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S++ A S   S++ C  IH+R++KS   S+  +G  L+  Y K G  EDA+R+F ++   
Sbjct: 124 SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 183

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           D+VSWNS++   S  G     +  F +M  E G +P   T L+V+SAC+  G + +G+ +
Sbjct: 184 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 243

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA--CRC 602
              +VK  G+  +    + ++++ G+ G L+ A      +P++     W  +        
Sbjct: 244 HGVVVK-LGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVS-WNSMVVIHNHNG 301

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
           +++  M  F   +   ++PD A + V L     + GL   AE
Sbjct: 302 YAEKGMDLFNLMKRAGINPDQATM-VALLRACTDTGLGRQAE 342



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 114/262 (43%), Gaps = 34/262 (12%)

Query: 47  SACQLFNKSPKRAGLSTSDLIF----NGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSN 102
           +A QLF + P R+ +S + ++     NGY    EKG+       R    PD         
Sbjct: 274 AASQLFEEMPVRSLVSWNSMVVIHNHNGY---AEKGMDLFNLMKRAGINPD--------- 321

Query: 103 TVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMY 162
                         +  ++ +L  C+           HA I +     D  +  +L+N+Y
Sbjct: 322 --------------QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLY 367

Query: 163 AKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYS 222
           AK G + +   + +++   D  +   +LAGYA +A   +A   F  +    V+ +H T++
Sbjct: 368 AKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFT 427

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL- 279
            +L+ C     ++EGK+ + + M   Y  +  + +   ++ +  + G +EDA  + + + 
Sbjct: 428 HLLSACSHSGLVEEGKK-YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP 486

Query: 280 VQRNVISWTAIINGFKQHGDYE 301
           ++ +   W A++   + +G+ E
Sbjct: 487 MEPSSGVWGALLGACRVYGNVE 508


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 196/651 (30%), Positives = 323/651 (49%), Gaps = 21/651 (3%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A Q+F+K P R  +S + +I               GY T N+S     +        P  
Sbjct: 53  ARQVFDKMPHRDIVSWTAII--------------KGYVTANNSDEAMILFSAMRVVDPAV 98

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
                   D   V  VL  C +   +  G   HA   KT++    FV +SL++MY + G 
Sbjct: 99  S------PDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGK 152

Query: 168 IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
           I+    V  +MP+ +  +   ++ G      + +  ++F ++   +   + +T++  L  
Sbjct: 153 IEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKA 212

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C  L  +  GKQ+H   +   + +   V+N+L TMY +CG M D   +FE + +R+V+SW
Sbjct: 213 CAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSW 272

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T++I  + + G  EK +     MR   + PNE TF    ++CASL     G   H  V  
Sbjct: 273 TSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFS 332

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G+     V  +++ MYS  G++  A    + M +    +SW+  I G+ +    EEA +
Sbjct: 333 LGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGM-RCRDIISWSTIIGGYSQAGFGEEAFK 391

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            FS M ++     +F  +S+L     +  L    Q+H+       E N  V S+LI  Y+
Sbjct: 392 YFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYS 451

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG+ ++A ++F +    D+VS  +MI  Y+++G++++AI LFEK +  G  P + TF++
Sbjct: 452 KCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFIS 511

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL+AC+HSG +  G   F  M ++Y + P + HY CMVDLL RAG+L  A   I  +  K
Sbjct: 512 VLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWK 571

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
               +W  L  AC+   D++     +++ILELDP  A   VTL+N+Y+  G   +A   R
Sbjct: 572 KDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVR 631

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           K MK K + KEPG S I++ + +  F S ++ H     +Y  L+ ++   E
Sbjct: 632 KNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPLSEDIYNILELVVSGAE 682



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 208/427 (48%), Gaps = 4/427 (0%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F T S +      G+++    V  +MP+ DI S   ++ GY      D+A   F  +  +
Sbjct: 35  FDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVV 94

Query: 213 D--VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           D  V P+    S +L  CG  S I  G+ LHA  +K   LS   V ++LL MY + G +E
Sbjct: 95  DPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIE 154

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            +  VF  +  RN ++WTAII G    G Y++ L     M       + +TF +AL +CA
Sbjct: 155 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACA 214

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            LR    G   H  VI RG     +V  ++  MY+  GE+ +     + M +    VSW 
Sbjct: 215 GLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSER-DVVSWT 273

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           + I  + R    E+A+E F +M  +    +E T++++  AC+ L  L   EQ+H  +   
Sbjct: 274 SLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSL 333

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
               ++ V +S+++ Y+ CG  + A  +F  +   D++SW+++I  YSQ G   +A   F
Sbjct: 334 GLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYF 393

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
             M   G +PT+    ++LS   +  +++ G++V  ++   +G+       S ++++  +
Sbjct: 394 SWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV-HALAFCFGLEQNSTVRSTLINMYSK 452

Query: 571 AGKLEIA 577
            G ++ A
Sbjct: 453 CGNIKEA 459


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 194/648 (29%), Positives = 343/648 (52%), Gaps = 27/648 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    I  L  C   E L  G R H ++  + +  D  V+ +L+NMY KCG +     V 
Sbjct: 144 DAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 203

Query: 176 KQMPYL-DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            +M    ++ S + +   +A +    +A   F  +  + ++       T+L+ C S + +
Sbjct: 204 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 263

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTAIIN 292
            +G+ +H+      + S+  V+NA++TMY +CG +E+A  VF+ + +  R+V+SW  +++
Sbjct: 264 QDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 323

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +  +   +  ++L   M+   +  ++ T+   L++C+S  +  +G + H Q++   +  
Sbjct: 324 AYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 380

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              VG A+V MY+  G   EA+    +M +  S +SW   I+ + R +   EA   F QM
Sbjct: 381 NVIVGNALVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQM 439

Query: 413 V---RNDAA----CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEA 465
           +   +N ++     D   + +IL AC+ + +L   + +  +       S+  VG++++  
Sbjct: 440 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 499

Query: 466 YNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
           Y KCG  E+  R+F  + +  DV  WN+MI  Y+Q G++ +A+ LF +M +EG+RP + +
Sbjct: 500 YGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 559

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           F+++L ACSH+GL   G+  F SM  EY  +     H+ C+ DLLGR G+L+ A  F+  
Sbjct: 560 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 619

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           LP+KP A  W  L AACR H DLK A+ ++ ++L L+P  A  YV LSN+YAE       
Sbjct: 620 LPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAV 679

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH- 702
            + RK M  + + KE G S IE+   ++ F + + +H    ++ E+L +L  Q+++ G+ 
Sbjct: 680 AKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYV 739

Query: 703 ---------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
                     D ++++R+L+ HSERLA+  GLIS P       ++ L 
Sbjct: 740 PDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLR 787



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 239/490 (48%), Gaps = 20/490 (4%)

Query: 122 EVLSYCSREECLELGRRYHALITK-TAVCGDQFVTASLVNMYAKC---GDIKSMVAVVKQ 177
            +L  C+R + L  GR+ H+L  K   + G+  +   +V+MYA C   GD K+    ++Q
Sbjct: 48  RLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQ 107

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
               ++ S   L+A +A +    +      ++    V+P+  T+ T L  CG   ++ +G
Sbjct: 108 R---NLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDG 164

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQ 296
            ++H   +  +      VSNALL MY KCG +  A+ VF  + + RNVISW+ +      
Sbjct: 165 IRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHAL 224

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG+  + LR    M   GI   +      L++C+S      G + H+ +   G      V
Sbjct: 225 HGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLV 284

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
             A++ MY   G + EA+K    M ++    VSWN  ++ +  N + ++AI+ + +M   
Sbjct: 285 ANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM--- 341

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D+ TY S+L ACS    +     +H +IV  + E NV VG++L+  Y KCGS  +A
Sbjct: 342 QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEA 401

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV-------VEGIRPTNSTFLAV 528
             VF ++    ++SW ++I AY +     +A  LF++M+        + ++P    F+ +
Sbjct: 402 RAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 461

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L+AC+    ++ G+ V E      G+  ++A  + +V+L G+ G++E        +  +P
Sbjct: 462 LNACADVSALEQGKMVSEQ-AASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRP 520

Query: 589 TAPIWRPLFA 598
              +W  + A
Sbjct: 521 DVQLWNAMIA 530



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 32/486 (6%)

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV-SNALLTM 262
           S  L L+   V+  + TY+ +L  C    A+ EG+++H+  +K   L    +  N +++M
Sbjct: 29  SAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSM 88

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y  C    DA++ F+ L QRN+ SWT ++  F   G  ++ LR +  MR+DG+ P+  TF
Sbjct: 89  YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 148

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
             AL SC    +   G   H  V+   + +   V  A+++MY   G +  AK+   +M +
Sbjct: 149 ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 208

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
           + + +SW+        +    EA+  F  M+       +    +IL ACS    +     
Sbjct: 209 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRL 268

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQN 500
           IHS I  S FES + V ++++  Y +CG+ E+A +VF  +  A  DVVSWN M+ AY  N
Sbjct: 269 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHN 328

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPE 557
            R + AI L+++M    +R    T++++LSACS +  V  G+ + + +V    E  ++  
Sbjct: 329 DRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG 385

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
            A    +V +  + G    A      +  +     W  + +A      +  A  + +Q+L
Sbjct: 386 NA----LVSMYAKCGSHTEARAVFDKMEQRSIIS-WTTIISAYVRRRLVAEACHLFQQML 440

Query: 618 ELDPD--------DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS------KEPGCSW 663
           EL+ +        DA  +VT+ N  A+      A EQ K++  +  S      K  G + 
Sbjct: 441 ELEKNGSSQRVKPDALAFVTILNACAD----VSALEQGKMVSEQAASCGLSSDKAVGTAV 496

Query: 664 IEVYNK 669
           + +Y K
Sbjct: 497 VNLYGK 502


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 203/664 (30%), Positives = 343/664 (51%), Gaps = 56/664 (8%)

Query: 117 KQFVIE-VLSYCSREEC--LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM-- 171
           K+F++E   S C  E C   + G + HA      +    F  + L++ ++  G    +  
Sbjct: 3   KRFLLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDH 62

Query: 172 -VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAIC 228
              +  Q+   ++   N ++ GY+++    +A   ++ +   GI   PN++T+  +L  C
Sbjct: 63  SRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGI-APPNNFTFPFLLNSC 121

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
             LS+++ G ++H+  +K  + S   V NAL+ +Y   G +  A ++F+  + R+++S+ 
Sbjct: 122 ARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYN 181

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK- 347
            +I G+ +    E  L L   M+  GI P+E+TF    + C+ L   ++G   HAQV K 
Sbjct: 182 TMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKN 241

Query: 348 -RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-------------------- 386
            R +     + +AIVDMY+  G I  A++    MG S S+                    
Sbjct: 242 LRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVAR 301

Query: 387 -----------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
                      +SW A I+G+ +  +  EA+E F +M       DE T  ++L AC+ L 
Sbjct: 302 KLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLG 361

Query: 436 SLATCEQI-HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL--TAADVVSWNS 492
           +    +++ H  I    F  N  + +++++ Y KCGS + A  +F ++         +NS
Sbjct: 362 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 421

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI   +Q+G    AI +F +++  G++P   TF+ VL AC HSGL+++G+K+FESM   Y
Sbjct: 422 MIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 481

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
           GI P+  HY CMVDLLGR G LE A   +  +P +  + IWR L +ACR H ++K+ E  
Sbjct: 482 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 541

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
            +++LE++    A YV LSN+ A+A    +A + RK+M+   I K PG S+IE+   I+R
Sbjct: 542 GQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHR 601

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVG 721
           F + +KSH +  ++   LK +  +++  G+  N           EKE  V YHSE+LA+ 
Sbjct: 602 FVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALA 661

Query: 722 FGLI 725
           FGL+
Sbjct: 662 FGLM 665



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 105/191 (54%), Gaps = 9/191 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRR-YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           D+  ++ VLS C+R    +LG+R YH  I       +  +TA++++MYAKCG I S + +
Sbjct: 346 DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEI 405

Query: 175 VKQMPYLDIASC---NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            +++   ++ +    N ++AG A++ L + A + F +L    ++P+  T+  +L  CG  
Sbjct: 406 FRRVGK-NMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHS 464

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWT 288
             I+EGK+L  ++M   Y  K  + +   ++ +  + G +E+A  + + +  + N + W 
Sbjct: 465 GLIEEGKKLF-ESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWR 523

Query: 289 AIINGFKQHGD 299
           A+++  + HG+
Sbjct: 524 ALLSACRTHGN 534


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 174/480 (36%), Positives = 280/480 (58%), Gaps = 54/480 (11%)

Query: 262 MYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK-PLRLVCLMREDGIDP 317
           MY KC   G ++D+  VFE + + NV+SWTAII  + Q G+ +K  + L C M       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
                  A  +C                          VG +++ MY+  G + +A+K  
Sbjct: 54  -----ISASVNC--------------------------VGNSLISMYARSGRMEDARKAF 82

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
             + +  + VS+NA + G+ +N K+EEA   F+++         FT++S+L   + + ++
Sbjct: 83  DILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 141

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
              EQIH R++K  ++SN  + ++LI  Y++CG+ E A +VF+++   +V+SW SMI  +
Sbjct: 142 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 201

Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +++G A +A+ +F KM+  G +P   T++AVLSACSH G++ +GQK F SM KE+GI+P 
Sbjct: 202 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 261

Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
             HY+CMVDLLGR+G L  A+ FI+++P+   A +WR L  ACR H + ++    ++ IL
Sbjct: 262 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMIL 321

Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
           E +PDD A Y+ LSN++A AG   D  + RK MK + + KE GCSWIEV N+++RF    
Sbjct: 322 EQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGE 381

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
            SH +  ++Y++L QL  +I+++G+            + +KE  +  HSE++AV FGLIS
Sbjct: 382 TSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIS 441



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 11/256 (4%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
           V  SL++MYA+ G ++        +   ++ S N ++ GYAKN   ++AF  F ++    
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           +  + +T++++L+   S+ A+ +G+Q+H + +K  Y S   + NAL++MY +CG +E A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
            VF  +  RNVISWT++I GF +HG   + L +   M E G  PNE T+   L++C    
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSAC---- 236

Query: 334 NSHMGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
            SH+G +      F++   + G+         +VD+    G + EA + +  M   A ++
Sbjct: 237 -SHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADAL 295

Query: 388 SWNAQIAGFFRNQKTE 403
            W   +     +  TE
Sbjct: 296 VWRTLLGACRVHGNTE 311



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 183/406 (45%), Gaps = 53/406 (13%)

Query: 161 MYAKC---GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD-QAFSFFLKLDGIDVQP 216
           MYAKC   G +     V +QMP  ++ S   ++  Y ++   D +A   F K+       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
                         +SA                 S   V N+L++MY + G MEDA   F
Sbjct: 54  --------------ISA-----------------SVNCVGNSLISMYARSGRMEDARKAF 82

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + L ++N++S+ AI++G+ ++   E+   L   + + GI  + +TF   L+  AS+    
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H +++K G      +  A++ MYS  G I  A +   EM +  + +SW + I GF
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM-EDRNVISWTSMITGF 201

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESN 455
            ++     A+E F +M+      +E TY ++L ACS +  ++  ++  + + K       
Sbjct: 202 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 261

Query: 456 VHVGSSLIEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGR---ARKAIILFE 511
           +   + +++   + G   +A E + S    AD + W +++ A   +G     R A     
Sbjct: 262 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHA----A 317

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
           +M++E      + ++ + +  + +G  +D  K+ +SM KE  ++ E
Sbjct: 318 EMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM-KERNLIKE 362


>gi|356562121|ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 921

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 200/685 (29%), Positives = 333/685 (48%), Gaps = 108/685 (15%)

Query: 127 CSREEC-----LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI------------- 168
           C+ + C       L  + HA + K  +     +  SLV+MY KCG I             
Sbjct: 147 CTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESP 206

Query: 169 -----KSMV-------------AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
                 SM+              V  +MP  D  S N L++ +++     +  S F+++ 
Sbjct: 207 SLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMC 266

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            +  +PN  TY ++L+ C S+S +  G  LHA+ +++++     + + L+ MY KCG + 
Sbjct: 267 NLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLA 326

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  VF  L ++N +SWT  I+G  Q G  +  L L   MR+  +  +E+T    L  C+
Sbjct: 327 LARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCS 386

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI-----------------WEA 373
               +  G + H   IK GM     VG AI+ MY+  G+                  W A
Sbjct: 387 GQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTA 446

Query: 374 -------------KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
                         +Q  +M    + ++WN+ ++ + ++  +EE ++ +  M       D
Sbjct: 447 MITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPD 506

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T+++ ++AC+ L ++    Q+ S + K    S+V V +S++  Y++CG  ++A +VF 
Sbjct: 507 WVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFD 566

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   +++SWN+M+ A++QNG   KAI  +E M+    +P + +++AVLS          
Sbjct: 567 SIHVKNLISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLS---------- 616

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
                                    DLLGRAG L  A   I  +P KP A +W  L  AC
Sbjct: 617 -------------------------DLLGRAGLLNQAKNLIDGMPFKPNATVWGALLGAC 651

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R H D  +AE  +K+++EL+ +D+  YV L+N+YAE+G   +  + RKLMK+K I K PG
Sbjct: 652 RIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPG 711

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----TDNEKEDRVLYHS 715
           CSWIEV N+++ F     SH ++ KVY KL+++M++IED G      +   +  +  YHS
Sbjct: 712 CSWIEVDNRVHVFTVDETSHPQINKVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--YHS 769

Query: 716 ERLAVGFGLISLPAKNKFECSRTLE 740
           E+LA  FGL+SLP     + ++ L 
Sbjct: 770 EKLAFAFGLLSLPPWMPIQVTKNLR 794



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 273/620 (44%), Gaps = 104/620 (16%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ----------------- 177
           + R+ HA +  + +    F+  +L+++Y+ CG +     V ++                 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 178 --------------MPYL--DIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQP-N 217
                         MP +  D  S   +++GY +N L   +   F+ +      D+Q  +
Sbjct: 82  DSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCD 141

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES--- 274
            ++Y+  +  CG L++     QLHA  +KL   ++T + N+L+ MYIKCG +  AE+   
Sbjct: 142 PFSYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFL 201

Query: 275 ----------------------------VFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                                       VF  + +R+ +SW  +I+ F Q+G   + L  
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLST 261

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G  PN  T+   L++CAS+ +   G   HA++++   +L  F+G+ ++DMY+ 
Sbjct: 262 FVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAK 321

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  A++    +G+  + VSW   I+G  +    ++A+  F+QM +     DEFT ++
Sbjct: 322 CGCLALARRVFNSLGEQ-NQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLAT 380

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL  CS     A+ E +H   +KS  +S+V VG+++I  Y +CG  E A   F  +   D
Sbjct: 381 ILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRD 440

Query: 487 VVSWNSMIKAYSQNG---RARK----------------------------AIILFEKMVV 515
            +SW +MI A+SQNG   RAR+                             + L+  M  
Sbjct: 441 TISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRS 500

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + ++P   TF   + AC+    ++ G +V  S V ++G+  + +  + +V +  R G+++
Sbjct: 501 KAVKPDWVTFATSIRACADLATIKLGTQVV-SHVTKFGLSSDVSVANSIVTMYSRCGQIK 559

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNM 633
            A     ++ +K     W  + AA   +     A    + +L  E  PD  +    LS++
Sbjct: 560 EARKVFDSIHVKNLIS-WNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLSDL 618

Query: 634 YAEAGLQADAEEQRKLMKMK 653
              AGL   A+     M  K
Sbjct: 619 LGRAGLLNQAKNLIDGMPFK 638



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 195/433 (45%), Gaps = 37/433 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    L+ G   HA I +     D F+ + L++MYAKCG +     V   +   +
Sbjct: 280 VLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQN 339

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S  C ++G A+  L D A + F ++    V  + +T +T+L +C   +    G+ LH 
Sbjct: 340 QVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAASGELLHG 399

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY-- 300
             +K    S   V NA++TMY +CG  E A   F  +  R+ ISWTA+I  F Q+GD   
Sbjct: 400 YAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDR 459

Query: 301 -----------------------------EKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
                                        E+ ++L  LMR   + P+  TF  ++ +CA 
Sbjct: 460 ARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G    + V K G++    V  +IV MYS  G+I EA+K    +    + +SWNA
Sbjct: 520 LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSI-HVKNLISWNA 578

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +A F +N    +AIE +  M+R +   D  +Y ++L    LL       Q  + I    
Sbjct: 579 MMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVLS--DLLGRAGLLNQAKNLIDGMP 636

Query: 452 FESNVHVGSSLIEA---YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           F+ N  V  +L+ A   ++     E A +   +L   D   +  +   Y+++G       
Sbjct: 637 FKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVAD 696

Query: 509 LFEKMVVEGIRPT 521
           + + M V+GIR +
Sbjct: 697 MRKLMKVKGIRKS 709



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 195/452 (43%), Gaps = 49/452 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFE--GLVQRNVISWTAIINGFKQHGDYEKPLR-LVCLMRED 313
           N +L  +   G M +AE++F+   L+ R+ +SWT +I+G+ Q+G     ++  + ++R+ 
Sbjct: 74  NTMLHAFFDSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDS 133

Query: 314 GIDP---NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             D    + +++T  + +C  L ++ +    HA VIK  +     +  ++VDMY   G I
Sbjct: 134 NHDIQNCDPFSYTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAI 193

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC----------- 419
             A+     + +S S   WN+ I G+ +     EA+  F++M   D              
Sbjct: 194 TLAETIFLNI-ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQY 252

Query: 420 --------------------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
                               +  TY S+L AC+ +  L     +H+RI++ +   +  +G
Sbjct: 253 GHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLG 312

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           S LI+ Y KCG    A RVF+ L   + VSW   I   +Q G    A+ LF +M    + 
Sbjct: 313 SGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVV 372

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               T   +L  CS       G+ +    +K  G+       + ++ +  R G  E A +
Sbjct: 373 LDEFTLATILGVCSGQNYAASGELLHGYAIKS-GMDSSVPVGNAIITMYARCGDTEKASL 431

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAG 638
              ++P++ T   W  +  A   + D+  A    +Q  ++ P+ +   + ++ + Y + G
Sbjct: 432 AFRSMPLRDTIS-WTAMITAFSQNGDIDRA----RQCFDMMPERNVITWNSMLSTYIQHG 486

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
              +  +   LM+ K +  +    W+     I
Sbjct: 487 FSEEGMKLYVLMRSKAVKPD----WVTFATSI 514



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 31/245 (12%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +LD+  +  +L  CS +     G   H    K+ +     V  +++ MYA+CGD +    
Sbjct: 372 VLDEFTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASL 431

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQA------------------------------- 202
             + MP  D  S   ++  +++N   D+A                               
Sbjct: 432 AFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEG 491

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
              ++ +    V+P+  T++T +  C  L+ I  G Q+ +   K    S  +V+N+++TM
Sbjct: 492 MKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTM 551

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
           Y +CG +++A  VF+ +  +N+ISW A++  F Q+G   K +     M      P+  ++
Sbjct: 552 YSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEAMLRTECKPDHISY 611

Query: 323 TVALA 327
              L+
Sbjct: 612 VAVLS 616



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 71/122 (58%), Gaps = 2/122 (1%)

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A  L  S     ++H++++ S  ++++ + ++L+  Y+ CG  +DA RVF +   A++ +
Sbjct: 13  AFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFT 72

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+M+ A+  +GR R+A  LF++M +  I   + ++  ++S    +GL     K F SM+
Sbjct: 73  WNTMLHAFFDSGRMREAENLFDEMPL--IVRDSVSWTTMISGYCQNGLPGHSIKTFMSML 130

Query: 550 KE 551
           ++
Sbjct: 131 RD 132


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 185/568 (32%), Positives = 283/568 (49%), Gaps = 44/568 (7%)

Query: 115 LDKQFVIEVLSYCSRE--------ECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           +D   V  VL  C++             LG+  HALI +     DQ V  SL++MY KC 
Sbjct: 239 VDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCM 298

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +   V V   +P +   S N L+ G+ +   + +A      ++    +PN  TYS MLA
Sbjct: 299 QMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLA 358

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            C                                   IK   +  A ++F+ + + +V +
Sbjct: 359 SC-----------------------------------IKARDVLSARAMFDKISRPSVTT 383

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W  +++G+ Q   ++  + L   M+   + P+  T  V L+SC+ L    +G   H+  +
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV 443

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           +  +    FV + +VDMYS  G+I  A+     M +    V WN+ I+G   +   EEA 
Sbjct: 444 RFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTER-DVVCWNSMISGLAIHSLNEEAF 502

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           + F QM  N     E +Y+S++ +C+ L S+    QIH++IVK  ++ NV+VGS+LI+ Y
Sbjct: 503 DFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMY 562

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            KCG+ +DA   F  +   ++V+WN MI  Y+QNG   KA+ LFE M+    RP   TF+
Sbjct: 563 AKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFI 622

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           AVL+ CSHSGLV +    F SM   YGI P   HY+C++D LGRAG+L      I N+P 
Sbjct: 623 AVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPC 682

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
           K    +W  L AAC  H + ++ E  +K +  LDP + + YV LSN+YA  G   DA   
Sbjct: 683 KDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGV 742

Query: 647 RKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           R LM  + + K  G SWI+  + ++ F 
Sbjct: 743 RALMSSRGVVKGRGYSWIDHKDGVHAFM 770



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 228/487 (46%), Gaps = 50/487 (10%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E L+   F +  VLS C     L+ GRR H L  K  +  + FV  +L+ MY KCG ++ 
Sbjct: 134 EGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVED 193

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAIC 228
            V +   M   +  S   ++ G  +    D A   F ++   G+ V P     S++L  C
Sbjct: 194 AVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDP--VAVSSVLGSC 251

Query: 229 GS--------LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
                     + A   G+ +HA  ++  + S   V N+L+ MY KC  M++A  VF+ L 
Sbjct: 252 AQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP 311

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
             + +SW  +I GF Q G Y K L ++ LM E G +PNE T++  LASC   R       
Sbjct: 312 NISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKAR------- 364

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
                                       ++  A+    ++ +  S  +WN  ++G+ + +
Sbjct: 365 ----------------------------DVLSARAMFDKISRP-SVTTWNTLLSGYCQEE 395

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             ++ +E F +M   +   D  T + IL +CS L  L    Q+HS  V+    +++ V S
Sbjct: 396 LHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVAS 455

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            L++ Y+KCG    A  +F+++T  DVV WNSMI   + +    +A   F++M   G+ P
Sbjct: 456 GLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMP 515

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
           T S++ +++++C+    V  G+++   +VK+ G        S ++D+  + G ++ A +F
Sbjct: 516 TESSYASMINSCARLSSVPQGRQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDARVF 574

Query: 581 ISNLPIK 587
              +  K
Sbjct: 575 FDCMVTK 581



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 145/581 (24%), Positives = 263/581 (45%), Gaps = 91/581 (15%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           + GD+ +  A++ +MP  ++ S N ++A  A++    +A   +  +    + P H+T ++
Sbjct: 86  RAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L+ CG+++A+D+G++ H   +K+       V NALL MY KCG +EDA  +F+G+   N
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPN 205

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS--------LRNS 335
            +S+TA++ G  Q G  +  LRL   M   G+  +    +  L SCA         +R  
Sbjct: 206 EVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF 265

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   HA ++++G      VG +++DMY+   ++ EA K    +  + S+VSWN  I G
Sbjct: 266 RLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL-PNISTVSWNILITG 324

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           F +     +A+E  + M  + +  +E TYS++L +C           I +R V S     
Sbjct: 325 FGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC-----------IKARDVLS----- 368

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
                              A  +F +++   V +WN+++  Y Q    +  + LF +M  
Sbjct: 369 -------------------ARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQH 409

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + ++P  +T   +LS+CS  G++  G +V  + V+ + +  +    S +VD+  + G++ 
Sbjct: 410 QNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVR-FLLHNDMFVASGLVDMYSKCGQIG 468

Query: 576 IALIF---------------ISNLPIK-------------------PTAPIWRPLFAACR 601
           IA I                IS L I                    PT   +  +  +C 
Sbjct: 469 IARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCA 528

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
             S +     I  QI++ D  D  VYV   L +MYA+ G   DA      M  K I    
Sbjct: 529 RLSSVPQGRQIHAQIVK-DGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNI---- 583

Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
             +W    N++   ++QN    +   ++E +    Q+ + +
Sbjct: 584 -VAW----NEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGV 619



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 198/450 (44%), Gaps = 34/450 (7%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           NA L+   + G ++ A ++ + +  RNV+SW  +I    +     + L L   M  +G+ 
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P  +T    L++C ++     G   H   +K G+    FV  A++ MY+  G + +A + 
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS---- 432
              M  S + VS+ A + G  +    ++A+  F++M R+    D    SS+L +C+    
Sbjct: 198 FDGMA-SPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACA 256

Query: 433 ----LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
               ++ +    + IH+ IV+  F S+ HVG+SLI+ Y KC   ++A +VF  L     V
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTV 316

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN +I  + Q G   KA+ +   M   G  P   T+  +L++C  +  V   + +F+ +
Sbjct: 317 SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKI 376

Query: 549 VKE---------YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            +           G   EE H    V+L  R          + +  ++P       + ++
Sbjct: 377 SRPSVTTWNTLLSGYCQEELHQD-TVELFRR----------MQHQNVQPDRTTLAVILSS 425

Query: 600 CRCHSDLKMAEFI-SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI--- 655
           C     L +   + S  +  L  +D  V   L +MY++ G    A      M  +++   
Sbjct: 426 CSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCW 485

Query: 656 -SKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
            S   G +   +  + + FF Q + +  MP
Sbjct: 486 NSMISGLAIHSLNEEAFDFFKQMRGNGMMP 515



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R  +S    N +  ++ + A  + G  + A  +  ++   +VVSWN++I A +++ RA +
Sbjct: 64  RAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGE 123

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           A+ L+E M+ EG+ PT+ T  +VLSAC     + DG++     VK
Sbjct: 124 ALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVK 168


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 310/589 (52%), Gaps = 3/589 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   V   L  CS  + LELG+  H  + K  +  D FV ++L+ +Y+KCG +   V V 
Sbjct: 104 DNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVF 163

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAI 234
            + P  D+     ++ GY +N   + A +FF ++  ++ V P+  T  +  + C  LS  
Sbjct: 164 TEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDF 223

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G+ +H    +  + +K  ++N++L +Y K G +  A ++F  +  +++ISW++++  +
Sbjct: 224 NLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACY 283

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G     L L   M +  I+ N  T   AL +CAS  N   G   H   +  G  L  
Sbjct: 284 ADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDI 343

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V TA++DMY        A      M K    VSW    +G+       +++  F  M+ 
Sbjct: 344 TVSTALMDMYMKCFSPKNAIDLFNRMPKK-DVVSWAVLFSGYAEIGMAHKSLGVFCNMLS 402

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D      IL A S L  +     +H+ + KS F++N  +G+SLIE Y KC S ++
Sbjct: 403 YGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDN 462

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACS 533
           A +VF  +   DVV+W+S+I AY  +G+  +A+ LF +M     ++P + TF+++LSACS
Sbjct: 463 ANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACS 522

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GL+++G K+F  MV EY ++P   HY  MVDLLGR G+L+ AL  I+ +P++    +W
Sbjct: 523 HAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVW 582

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  ACR H ++K+ E  +  +  LDP+ A  Y  LSN+Y       DA + R L+K  
Sbjct: 583 GALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKEN 642

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
              K  G S +E+ N+++ F + ++ H E  ++Y  L++L  ++++ G+
Sbjct: 643 RFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDARMKEEGY 691



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 243/512 (47%), Gaps = 17/512 (3%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           + H+   K  +  D FV   L  +YA+   +     + ++ P   +   N LL  Y    
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 198 LFDQAFSFFLKLDG---IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
            + +  S F +++     + +P++YT S  L  C  L  ++ GK +H    K +  +   
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL----RLVCLM 310
           V +AL+ +Y KCG M DA  VF    +++V+ WT+II G++Q+G  E  L    R+V L 
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVL- 200

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             + + P+  T   A ++CA L + ++G   H  V +RG      +  +I+++Y   G I
Sbjct: 201 --EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
             A    +EM      +SW++ +A +  N     A+  F++M+      +  T  S L+A
Sbjct: 259 RSAANLFREM-PYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRA 317

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+   +L   + IH   V   FE ++ V ++L++ Y KC S ++A  +F+++   DVVSW
Sbjct: 318 CASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSW 377

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
             +   Y++ G A K++ +F  M+  G RP     + +L+A S  G+VQ       + V 
Sbjct: 378 AVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQAL-CLHAFVS 436

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           + G    E   + +++L  +   ++ A      +  K     W  + AA   H   + A 
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVT-WSSIIAAYGFHGQGEEAL 495

Query: 611 FISKQI---LELDPDDAAVYVTLSNMYAEAGL 639
            +  Q+    ++ P+D   +V++ +  + AGL
Sbjct: 496 KLFYQMSNHSDVKPND-VTFVSILSACSHAGL 526



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 167/398 (41%), Gaps = 32/398 (8%)

Query: 22  VVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISR 81
           V+EQV P               + ++  +  +   KR G  T   + N  +N+  K  S 
Sbjct: 199 VLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258

Query: 82  NGYSTRNDSFPDGFIDDGCSNTVPVTCYS-----------LESLLDKQF------VIEVL 124
              +      P     D  S +  V CY+              ++DK+       VI  L
Sbjct: 259 RSAANLFREMP---YKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISAL 315

Query: 125 SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
             C+    LE G+  H L        D  V+ +L++MY KC   K+ + +  +MP  D+ 
Sbjct: 316 RACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVV 375

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S   L +GYA+  +  ++   F  +     +P+      +LA    L  + +   LHA  
Sbjct: 376 SWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFV 435

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
            K  + +   +  +L+ +Y KC  +++A  VF+G+ +++V++W++II  +  HG  E+ L
Sbjct: 436 SKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEAL 495

Query: 305 RLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVG 357
           +L   M     + PN+ TF   L++C     SH G       MFH  V +  +       
Sbjct: 496 KLFYQMSNHSDVKPNDVTFVSILSAC-----SHAGLIEEGIKMFHVMVNEYQLMPNTEHY 550

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
             +VD+   +GE+ +A   + EM   A    W A +  
Sbjct: 551 GIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGA 588


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 192/652 (29%), Positives = 331/652 (50%), Gaps = 29/652 (4%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           C+N V    +    +  ++ + ++L   ++   L  G + H  +TK     D  +  +L+
Sbjct: 201 CTNPVAFP-FPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLI 259

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNH 218
           +MYAKCG++     V   M   ++ S   L+ G+ ++           ++    +  PN 
Sbjct: 260 DMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNE 319

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE- 277
           YT S  L  C     +  G  +H   ++  Y     V+++L+ +Y K G + DA  VF+ 
Sbjct: 320 YTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDC 379

Query: 278 -GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM------REDGIDPNEYTFTVALASCA 330
            GL  R + +W A+I+G+   G     L +   M       ED   P+E+TF   L +C 
Sbjct: 380 AGL-GRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACG 438

Query: 331 SLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            L     G   HA +   G +      +  A+VDMY   G +     Q+ E  +  +++ 
Sbjct: 439 GLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRL-PVAMQVFERLERKNAIQ 497

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W   + G  +  +  EA+E F +  R+ A  D    SSI+   +    +    Q+H   V
Sbjct: 498 WTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGV 557

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           KS   ++V  G+S+++ Y KCG  ++AER+F ++ A +VVSW +MI    ++G  R+A+ 
Sbjct: 558 KSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVA 617

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           +FE+M   G+ P   T+LA+LSACSH+GLV + ++ F  + ++  + P+  HY+CMVDLL
Sbjct: 618 MFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 677

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GRAG+L  A   I  +P++PT  +W+ L +ACR H D+ +       +L +D D+   YV
Sbjct: 678 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYV 737

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF--SQNKSHSEMPKV 686
           TLSN++AEAG   +  + R  M+ + + K+ GCSW+E+  +++ F+     ++H +   +
Sbjct: 738 TLSNVFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDI 797

Query: 687 YEKLKQLMQQI-EDIGHT---------DNEKEDR---VLYHSERLAVGFGLI 725
              L+ +  ++ E +G+          D ++E R   +  HSERLAVG  L+
Sbjct: 798 RRVLRDVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLL 849


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 203/637 (31%), Positives = 322/637 (50%), Gaps = 94/637 (14%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG---- 237
           D    N ++ GY+ N     A   F  L     +P+++T++++L   G+L+ I E     
Sbjct: 113 DTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL---GALALIVEDEKQC 169

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKC------------------------------- 266
           +Q+H   +K      T+V NALL++++KC                               
Sbjct: 170 QQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWT 229

Query: 267 ---------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
                    G ++ A    +G+ ++ V++W A+I+G+  HG + + L +   M   GI  
Sbjct: 230 TMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIK------------------------------ 347
           +E+T+T  L++CA+      G   HA +++                              
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEA 349

Query: 348 ----RGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
                 M + D V   AI+  Y   G I EAK   +EM +  + ++W   I+G  +N   
Sbjct: 350 RQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPER-NLLTWTVMISGLAQNGFG 408

Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
           EE+++ F++M        ++ ++  + AC+ L +L    Q+H+++V+  F+S++  G++L
Sbjct: 409 EESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNAL 468

Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
           I  Y KCG  E A  +F  +   D VSWN+MI A  Q+G   +A+ LFE M+ E I P  
Sbjct: 469 ITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            TFL VLS CSH+GLV++G + F+SM   YGI P E HY+ M+DLL RAGK   A   I 
Sbjct: 529 ITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIE 588

Query: 583 NLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
            +P++P  PIW  L A CR H ++ +    ++++ EL P     YV LSNMYA  G   D
Sbjct: 589 TMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDD 648

Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
             + RKLM+ K + KEPGCSWIEV NK++ F   +  H E+  VY  L++L  ++  +G+
Sbjct: 649 VAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGY 708

Query: 703 T----------DNEKEDRVL-YHSERLAVGFGLISLP 728
                      ++E+++ VL  HSE+LAVGFGL+ LP
Sbjct: 709 IPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLP 745



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 460 SSLIEAYNKCGSWEDAERVF--SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
           ++LI A++  G+   A  +F  + L   D V +N+MI  YS N     AI LF  ++  G
Sbjct: 85  TTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNG 144

Query: 518 IRPTNSTFLAVLSACS 533
            RP N TF +VL A +
Sbjct: 145 FRPDNFTFTSVLGALA 160


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 197/656 (30%), Positives = 328/656 (50%), Gaps = 30/656 (4%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS---FPDGFIDDGCSNTV 104
           A  +FNK   R  +S ++LI  GY+N           +  N++   F + ++D G     
Sbjct: 103 ARDMFNKMSHRDEISWTNLI-AGYVNA----------ANSNEALILFSNMWVDSG----- 146

Query: 105 PVTCYSLESLLDKQFVIEV-LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
                    L   QFV+ V L  C+    +  G   H    K+ +    FV+++LV+MY 
Sbjct: 147 ---------LQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYM 197

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G  +   +V + M   ++ S   ++ G           S+F ++    V  + +T++ 
Sbjct: 198 KVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAV 257

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            L        +  GK +HAQT+K  +     V N L TMY KC   +    +F  +   +
Sbjct: 258 ALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPD 317

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+SWT +I  + Q GD E+ L     MR+  + PNEYTF   +++CA+L  +  G   H 
Sbjct: 318 VVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHG 377

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             ++ G+     V  +I+ +YS  G + EA      M +    +SW+  I+ + +    +
Sbjct: 378 HALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRK-DIISWSTIISVYCQGSHAK 436

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EA    S M R     +EF  +S+L  C  +  L   +Q+H+  +    +    V S+LI
Sbjct: 437 EAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALI 496

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y++ G+ ++A ++F  +   D+VSW +MI  Y+++G +++AI LFE +   G+ P   
Sbjct: 497 SMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYV 556

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +L+AC+H+GLV  G   ++ M  EY I P + HY C++DLL RAG+L  A   + N
Sbjct: 557 TFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +P      +W  L  ACR H DL  A + ++Q+L L P+ A  ++TL+N+Y+ +G + +A
Sbjct: 617 MPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEA 676

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
              RKLMK K + KEPG SWI   +++  F +  +SH    ++   L+ L   I D
Sbjct: 677 AHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSIGD 732



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFL 526
           K G   +A  +F++++  D +SW ++I  Y     + +A+ILF  M V+ G++       
Sbjct: 96  KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
             L AC+    V  G+ +    VK  G++      S +VD+  + GK E       N+  
Sbjct: 156 VALKACALGMNVYFGELLHGFSVKS-GLINSVFVSSALVDMYMKVGKTEQGCSVFENMTT 214

Query: 587 K 587
           +
Sbjct: 215 R 215


>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 196/602 (32%), Positives = 320/602 (53%), Gaps = 16/602 (2%)

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
           V    ++ +++++F I +L  C   E L    +  A I    +  + FV  + +   ++ 
Sbjct: 2   VVLNPVQRIVEEKF-ITLLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRF 57

Query: 166 GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTML 225
             I     +  ++P  + A+ N +  GY +N         F +L+ I   PN +T+  ++
Sbjct: 58  KRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMII 117

Query: 226 AICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVI 285
             CG L  + EG+++H    K  + S + V+ +L+ MY K G +EDA  VF  + +RNV+
Sbjct: 118 KSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVV 177

Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
            WTAIING+   GD     RL  L  E  +      ++V ++     +N     M  A+ 
Sbjct: 178 VWTAIINGYILCGDVVSGRRLFDLAPERDV----VMWSVLISGYIESKN-----MAAARE 228

Query: 346 IKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           +   M   D +   A+++ Y+  GE+   +K   EM +  +  SWN  I G+ +N    E
Sbjct: 229 LFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPER-NVFSWNGLIGGYVKNGLFSE 287

Query: 405 AIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
            +E+F +M V      ++FT  ++L ACS L +L   + +H       ++ N+ VG+ LI
Sbjct: 288 TLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLI 347

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  E+A  VF+ L   D++SWN++I   + +G A  A+ +F++M  EG  P   
Sbjct: 348 DMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGV 407

Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
           TF+ +LSAC+H GLV+DG   F+SMV  Y I+P+  HY CMVDLLGRAG L+ AL FI  
Sbjct: 408 TFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRK 467

Query: 584 LPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +PI+P A IW  L  ACR + ++++AE   ++++EL+P++ A +V +SN+Y + G   D 
Sbjct: 468 MPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDV 527

Query: 644 EEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT 703
              +  M+     K PGCS IE  + +  F+S ++ HSE   +Y  LK L   +   G+ 
Sbjct: 528 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYV 587

Query: 704 DN 705
            N
Sbjct: 588 PN 589


>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
          Length = 587

 Score =  325 bits (832), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 184/568 (32%), Positives = 306/568 (53%), Gaps = 4/568 (0%)

Query: 133 LELGRRYHALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
           L  GR  HAL  ++     D FV A+LV+MYAKC  +   +         D+     ++ 
Sbjct: 5   LAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVT 64

Query: 192 GYAKNALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           GY +N +  +A  FF + + G    P+  T  ++++    L  +  G+  HA  ++  + 
Sbjct: 65  GYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFE 124

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
               + NA+L  Y++ G ++ A  +FEG+ +++V++W+ ++ G+ Q GD  + L     M
Sbjct: 125 YDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKM 184

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            E GI PN  T    + +C+   +   G   H   +K G  L   V TA+VDMY      
Sbjct: 185 VEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCH 244

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            EA +    M K   +V+W   I+GF +N   +E++  F  M+      D  T   +L A
Sbjct: 245 EEAMQLFCRMSKK-DAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAA 303

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           CS    +     +H  +V + F   + V ++L++ Y+KCG+   A RVF      DVV W
Sbjct: 304 CSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLW 363

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           +SMI  Y  +G  ++A+ LF+ MV   ++P + TF++VLSACSHSGLVQ+G+++FESM +
Sbjct: 364 SSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQ 423

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
            YG++P   H+S MVDLLGRAG+L+ A   +     +  A  W  L AACR H D +M+E
Sbjct: 424 VYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDTEMSE 482

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
            ++ ++L+LDPD A  Y  L+N+Y      + A+E R +++ + ++K PGCS +E+ N +
Sbjct: 483 VVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVM 542

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           + F +  + H +  K+   L++  + ++
Sbjct: 543 HTFTAGERPHKDWEKISRLLREFSRTLK 570



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/389 (23%), Positives = 187/389 (48%), Gaps = 24/389 (6%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+S  ++ + +  G+  HA + +     D  +  +++  Y + G +++   + + M 
Sbjct: 95  LVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMT 154

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ + +C++ GY ++    +A + + K+    ++PN  T  +++  C     I+EG++
Sbjct: 155 EKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRR 214

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H   +K+    +  V+ AL+ MY+KC   E+A  +F  + +++ ++W  +I+GF Q+G 
Sbjct: 215 VHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGL 274

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ +R+   M   G  P+  T    LA+C+        +  H  ++  G     FV  A
Sbjct: 275 PDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAA 334

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VD+YS  G +  A +   E       V W++ I+G+  +   ++A+E F  MV +    
Sbjct: 335 LVDLYSKCGNLGCAVRVF-ESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKP 393

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIV---KSKFESNVHV---------GSSLIEAYN 467
           +  T+ S+L ACS           HS +V   K  FES   V          S++++   
Sbjct: 394 NSLTFVSVLSACS-----------HSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLG 442

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           + G  ++A ++      AD  +W +++ A
Sbjct: 443 RAGELQEAAKLLHGNGRADAHTWCALLAA 471



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +++VL+ CS    +      H  +  T  C   FV A+LV++Y+KCG++   V V 
Sbjct: 293 DAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVF 352

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           +     D+   + +++GY  + L  QA   F  +    V+PN  T+ ++L+ C     + 
Sbjct: 353 ESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQ 412

Query: 236 EGKQLHAQTMKLQYLSKTAVSN-ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           EGK++     ++  +   AV + A++ +  + G +++A  +  G  + +  +W A++   
Sbjct: 413 EGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAAC 472

Query: 295 KQHGDYE 301
           + H D E
Sbjct: 473 RAHHDTE 479


>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 594

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 183/537 (34%), Positives = 291/537 (54%), Gaps = 33/537 (6%)

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           ML+ C +   ID G+Q+H  ++K    + T++ N+L  +Y K G +E     F+G   +N
Sbjct: 1   MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60

Query: 284 VISWTAIINGFKQHGDY-EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
           VI+WT +I+   +  +Y +  L L   M E G+ PNE+T T  ++ C +  +  +G    
Sbjct: 61  VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQ 120

Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR---- 398
           A   K G      V  + + +Y   GE  EA +  +EM  S+S ++WNA I+G+ +    
Sbjct: 121 AFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEM-DSSSIITWNAMISGYAQIMDS 179

Query: 399 -------NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
                    +  +A++ F  +VR++   D FT+SSIL  CS + +L   EQIH+  +K+ 
Sbjct: 180 AKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTG 239

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
             S+V V S+L+  YNKCGS E A + F ++     V+W SMI  YSQ+GR++ AI LFE
Sbjct: 240 CLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFE 299

Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
            MV+ G RP   TF+++LSACS++GLV++ ++ F+ M  EY I P   HY CMVD+  R 
Sbjct: 300 DMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRL 359

Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
           G+L+ A  FI     +P   IW  L A CR H ++++A + + ++LEL P     YV L 
Sbjct: 360 GRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLL 419

Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
           NMY   G   D    RKL K +++      SWI + +K+Y F + + +H +  ++Y+ L+
Sbjct: 420 NMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLE 479

Query: 692 QLMQQIEDIGHTDNEKEDRVLY--------------------HSERLAVGFGLISLP 728
            L+++ + +G+   +    +L+                    HSERLAV  GL+  P
Sbjct: 480 NLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETP 536



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 13/322 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +LS CS    ++LG++ H    K        +  SL  +Y K GD++S +   K  P  +
Sbjct: 1   MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60

Query: 183 IASCNCLLAGYAKNALF-DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           + +   +++  A++  + D   S FL +    V PN +T ++++++CG+   +  GKQ+ 
Sbjct: 61  VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQ 120

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A   K+   +   V N+ + +Y++ G  ++A  +FE +   ++I+W A+I+G+ Q  D  
Sbjct: 121 AFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSA 180

Query: 302 K-----------PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           K            L+L   +    + P+ +TF+  L+ C+++     G   HA  IK G 
Sbjct: 181 KDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGC 240

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                V +A+V+MY+  G I  A K   EM  + + V+W + I+G+ ++ ++++AI+ F 
Sbjct: 241 LSDVVVNSALVNMYNKCGSIECATKAFVEM-PTRTPVTWTSMISGYSQHGRSQDAIQLFE 299

Query: 411 QMVRNDAACDEFTYSSILKACS 432
            MV + A  +E T+ S+L ACS
Sbjct: 300 DMVLSGARPNEITFVSLLSACS 321



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 24/312 (7%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           +  V+S C     + LG++  A   K     +  V  S + +Y + G+    + + ++M 
Sbjct: 100 LTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMD 159

Query: 180 YLDIASCNCLLAGYAK---NALFD--------QAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
              I + N +++GYA+   +A  D        QA   F  L   +++P+ +T+S++L++C
Sbjct: 160 SSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVC 219

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            ++ A+++G+Q+HA T+K   LS   V++AL+ MY KCG +E A   F  +  R  ++WT
Sbjct: 220 SAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWT 279

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           ++I+G+ QHG  +  ++L   M   G  PNE TF   L++C     S+ G +  A+    
Sbjct: 280 SMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSAC-----SYAGLVEEAERYFD 334

Query: 349 GM-------ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
            M        L D  G  +VDM+  LG + +A   +K  G   +   W++ +AG   +  
Sbjct: 335 MMRNEYHIEPLVDHYG-CMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 393

Query: 402 TEEAIEAFSQMV 413
            E A  A  +++
Sbjct: 394 MELAFYAADRLL 405


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 223/748 (29%), Positives = 368/748 (49%), Gaps = 94/748 (12%)

Query: 25  QVKPK-KCNHRKTVEVKEPFASY-------SACQLFNKSPKRAGLSTSDLIFNGYMNIEE 76
           Q KP  KC      E     +SY        A ++F + P+ + +S + +I +GY+   E
Sbjct: 52  QTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMI-SGYLRNGE 110

Query: 77  KGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQ---FVI----------EV 123
             ++R  +    D  P+    D  S  V +  Y     L K    F I           +
Sbjct: 111 FELARKLF----DEMPE---RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTM 163

Query: 124 LSYCSREECLELGRR-YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           LS  ++  C++  R  +  +  K  V  +  ++A     Y +   ++    + K      
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA-----YVQNSKMEEACMLFKSRENWA 218

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S NCLL G+ K     +A  FF  ++  DV     +++T++        IDE +QL  
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFD 274

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           ++      + TA    +++ YI+  M+E+A  +F+ + +RN +SW A++ G+ Q    E 
Sbjct: 275 ESPVQDVFTWTA----MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEM 330

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              L               F V      S  N+                        ++ 
Sbjct: 331 AKEL---------------FDVMPCRNVSTWNT------------------------MIT 351

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y+  G+I EAK    +M K    VSW A IAG+ ++  + EA+  F QM R     +  
Sbjct: 352 GYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRS 410

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           ++SS L  C+ + +L   +Q+H R+VK  +E+   VG++L+  Y KCGS E+A  +F ++
Sbjct: 411 SFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+VSWN+MI  YS++G    A+  FE M  EG++P ++T +AVLSACSH+GLV  G+
Sbjct: 471 AGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGR 530

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + F +M ++YG++P   HY+CMVDLLGRAG LE A   + N+P +P A IW  L  A R 
Sbjct: 531 QYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRV 590

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H + ++AE  + +I  ++P+++ +YV LSN+YA +G   D  + R  M+ K + K PG S
Sbjct: 591 HGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYS 650

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WIE+ NK + F   ++ H E  +++  L++L  +++  G+            + EKE  V
Sbjct: 651 WIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMV 710

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTL 739
            YHSERLAV +G++ + +       + L
Sbjct: 711 RYHSERLAVAYGIMRVSSGRPIRVIKNL 738


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 205/675 (30%), Positives = 341/675 (50%), Gaps = 72/675 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY-- 180
           V   C      ELG   H  + +     + FV  ++++MY KC  +     V  ++ Y  
Sbjct: 132 VFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRG 191

Query: 181 -LDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             D  + N +++ Y+   + + A S F ++  G  + P+      +L +CG L     G+
Sbjct: 192 ICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGR 251

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H   ++   +    V NAL+ MY KCG MEDA  VFE +  ++V++W A++ G+ Q+G
Sbjct: 252 QVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNG 311

Query: 299 DYEKPLRLVCLMREDGID-----------------------------------PNEYTFT 323
            +E  L L   MRE+ I+                                   PN  T  
Sbjct: 312 RFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLM 371

Query: 324 VALASCAS---LRNSHMGYMFHAQVIKRGMALGDF----VGTAIVDMYSGLGEIWEAKKQ 376
             L++CAS   L +    + +  + I +G    D     V  A++DMY+    +  A+  
Sbjct: 372 SLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAM 431

Query: 377 LKEM-GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSL 433
             E+  K    V+W   I G+ ++     A++ FS+M + D     ++FT S +L AC+ 
Sbjct: 432 FDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACAR 491

Query: 434 LPSLATCEQIHSRIVK-SKFESNV-HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           L +L   +QIH+ +++ S+ +S+V  V + LI+ Y+K G  + A+ VF  ++  + VSW 
Sbjct: 492 LAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWT 551

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           S++  Y  +GR+  A  +F++M  E +     TFL VL ACSHSG+             +
Sbjct: 552 SLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-------------D 598

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           +G+ P   HY+CMVDLLGRAG+L  A+  I+++PI+PT  +W  L +ACR HS+ ++AEF
Sbjct: 599 FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEF 658

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
            +K++LEL  D+   Y  LSN+YA A    D      LMK   I K PG SW++    + 
Sbjct: 659 AAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGME 718

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIE------DIGHTDNEKEDRVLYHSERLAVGFGLI 725
            F+  +++H +  K+YE L  L+++I+      D+   D EK D++  HSE+LA+ + ++
Sbjct: 719 TFYVGDRTHLQSQKIYETLADLIKRIKANFSLHDV--DDEEKGDQLSEHSEKLALAYAIL 776

Query: 726 SLPAKNKFECSRTLE 740
           +LP       ++ L 
Sbjct: 777 TLPPGAPIRITKNLR 791



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 49/367 (13%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D   V+ +L  C        GR+ H    ++ +  D FV  +LV+MYAKCG ++    
Sbjct: 228 LPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANK 287

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL------------------------ 209
           V ++M + D+ + N ++ GY++N  F+ A S F K+                        
Sbjct: 288 VFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGF 347

Query: 210 --DGIDV---------QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL-------QYLS 251
             + +DV         +PN  T  ++L+ C S+ A+  GK+ H  ++K            
Sbjct: 348 GCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTD 407

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCL 309
             AV NAL+ MY KC  +E A ++F+ +    R+V++WT +I G+ QHGD    L+L   
Sbjct: 408 DLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSE 467

Query: 310 MR--EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYS 365
           M   ++ I PN++T +  L +CA L     G   HA V++R     D  FV   ++DMYS
Sbjct: 468 MFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYS 527

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G++  A+     M K  ++VSW + + G+  + ++E+A   F +M +     D  T+ 
Sbjct: 528 KSGDVDTAQVVFDSMSKR-NAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFL 586

Query: 426 SILKACS 432
            +L ACS
Sbjct: 587 VVLYACS 593



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 214/479 (44%), Gaps = 63/479 (13%)

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + A   F ++  +   P+HYT+  +   CG +S  + G  +H   ++L + S   V NA+
Sbjct: 108 NTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAV 167

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNV---ISWTAIINGFKQHGDYEKPLRLVCLMRE---- 312
           ++MY KC  +  A  VF+ L  R +   ++W +I++ +        P   V L RE    
Sbjct: 168 ISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSH---CFVPNVAVSLFREMTVG 224

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            GI P+       L  C  L     G   H   ++ G+    FVG A+VDMY+  G++ +
Sbjct: 225 YGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMED 284

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI----- 427
           A K  + M +    V+WNA + G+ +N + E+A+  F +M       D  T+SS+     
Sbjct: 285 ANKVFERM-RFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYA 343

Query: 428 ------------------------------LKACSLLPSLATCEQIHSRIVKS--KFESN 455
                                         L AC+ + +L   ++ H   VK   K E N
Sbjct: 344 QRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHN 403

Query: 456 -----VHVGSSLIEAYNKCGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAII 508
                + V ++LI+ Y KC S E A  +F ++     DVV+W  MI  Y+Q+G A  A+ 
Sbjct: 404 DDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQ 463

Query: 509 LFEKM--VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS-CMV 565
           LF +M  +   I P + T   VL AC+    ++ G+++   +++   I  +    + C++
Sbjct: 464 LFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLI 523

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD----LKMAEFISKQILELD 620
           D+  ++G ++ A +   ++  K  A  W  L      H       ++ + + K+ L LD
Sbjct: 524 DMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLD 581



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 148/325 (45%), Gaps = 11/325 (3%)

Query: 233 AIDEGKQLHAQTMKLQYL--SKTAVSNALLTMYIKCGMMEDAESVFEGLV---QRNVISW 287
            + + K LH Q +   +L  S T V+N + T YI    + +A  + E  V     +V  W
Sbjct: 36  TLTQAKLLHQQYIINGHLLNSYTNVTNLIYT-YISSNSITNAILLLEKNVTPSHSSVYWW 94

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
             +I            LRL   M+     P+ YTF     +C  + N  +G   H  VI+
Sbjct: 95  NQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIR 154

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEA 405
            G     FV  A++ MY     +  A+K   E+       SV+WN+ ++ +        A
Sbjct: 155 LGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVA 214

Query: 406 IEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATC-EQIHSRIVKSKFESNVHVGSSLI 463
           +  F +M V      D     +IL  C  L  L  C  Q+H   V+S    +V VG++L+
Sbjct: 215 VSLFREMTVGYGILPDTVGVVNILPVCGYL-GLGLCGRQVHGFCVRSGLVEDVFVGNALV 273

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           + Y KCG  EDA +VF ++   DVV+WN+M+  YSQNGR   A+ LF KM  E I     
Sbjct: 274 DMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333

Query: 524 TFLAVLSACSHSGLVQDGQKVFESM 548
           T+ +V+S  +  G   +   VF  M
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQM 358



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQL-KEM 380
           T++   C +L  + +    H Q I  G  L  +   T ++  Y     I  A   L K +
Sbjct: 28  TISKQQCKTLTQAKL---LHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNV 84

Query: 381 GKSASSVSW-NAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
             S SSV W N  I           A+  F +M       D +T+  + KAC  + +   
Sbjct: 85  TPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFEL 144

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT---AADVVSWNSMIKA 496
              IH  +++  FESNV V +++I  Y KC +   A +VF +L      D V+WNS++  
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSV 204

Query: 497 YSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           YS       A+ LF +M V  GI P     + +L  C + GL   G++V    V+  G++
Sbjct: 205 YSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRS-GLV 263

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
            +    + +VD+  + GK+E A
Sbjct: 264 EDVFVGNALVDMYAKCGKMEDA 285


>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
 gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
          Length = 967

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 182/538 (33%), Positives = 293/538 (54%), Gaps = 31/538 (5%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTM---LAICGSLSAIDEGKQLHAQTMKLQYL 250
           A    F  A S FL++    V P     +++   L  C  L        LHA  ++    
Sbjct: 340 ASQGQFLHAISLFLQMRA-SVAPRSSVPASLPAALKSCAGLGLCTLAASLHALAIRSGSF 398

Query: 251 SKTAVSNALLTMYIKC---------------GMMEDA-----ESVFEGLVQRNVISWTAI 290
           +    +NALL + IK                G +E A       VF+ +++R+ +SW  +
Sbjct: 399 ADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLERDAVSWNTL 458

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL---ASCASLRNSHMGYMFHAQVIK 347
           I G  +H  +++ L +V  M  DG  P+ +T +  L   A CA ++    G + H   IK
Sbjct: 459 ILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKR---GMVVHGYAIK 515

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G     FVG++++DMY+   ++  + K          +V WN+ +AG+ +N   EEA+ 
Sbjct: 516 NGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSF-SDCDAVLWNSMLAGYAQNGSVEEALG 574

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F +M++        T+SS++ A   L  L   +Q+H+ +++++F  N+ + SSLI+ Y 
Sbjct: 575 IFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYC 634

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCG+ + A RVF+ + + D+VSW +MI  Y+ +G   +A +LFE+M +  ++P + TFLA
Sbjct: 635 KCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLA 694

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           VL+ACSH+GLV +G K F SM  +YG +P   H + + D LGRAG L+ A  FIS + IK
Sbjct: 695 VLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIK 754

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
           PT+ +W  L  ACR H +  +AE ++K+I EL+P     +V LSNMY+ +G   +A + R
Sbjct: 755 PTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLR 814

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN 705
           K M++K + KEP CSWIEV NK++ F + +KSH    ++ + L    +Q+   G+  N
Sbjct: 815 KSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYVPN 872



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 190/433 (43%), Gaps = 65/433 (15%)

Query: 50  QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCY 109
           ++F++  +R  +S + LI    +   E    +   S   + + DGF+ D          +
Sbjct: 442 KVFDEMLERDAVSWNTLI----LGCAEHKRHQEALSMVREMWRDGFMPD---------TF 488

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           +L +      V+ + + C+    ++ G   H    K     D FV +SL++MYA C  + 
Sbjct: 489 TLST------VLPIFAECAD---IKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMD 539

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
             + V       D    N +LAGYA+N   ++A   F ++    V+P   T+S+++   G
Sbjct: 540 YSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFG 599

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           +LS +  GKQLHA  ++ ++     +S++L+ MY KCG ++ A  VF G+   +++SWTA
Sbjct: 600 NLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 659

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIK 347
           +I G+  HG   +   L   M    + PN  TF   L +C  A L ++   Y F++   +
Sbjct: 660 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKY-FNSMSNQ 718

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            G         A+ D     G++ EA   + EM    +S  W                  
Sbjct: 719 YGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVW------------------ 760

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EA 465
                            S++L+AC +  +    E++  +I + + +S   +GS +I    
Sbjct: 761 -----------------STLLRACRVHKNTVLAEEVAKKIFELEPKS---MGSHVILSNM 800

Query: 466 YNKCGSWEDAERV 478
           Y+  G W +A ++
Sbjct: 801 YSASGRWNEAAQL 813



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 192/453 (42%), Gaps = 59/453 (13%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI--------------- 168
           L  C+      L    HAL  ++    D+F   +L+N+  K                   
Sbjct: 373 LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 432

Query: 169 -----KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
                +SM  V  +M   D  S N L+ G A++    +A S   ++      P+ +T ST
Sbjct: 433 ESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLST 492

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L I    + I  G  +H   +K  + +   V ++L+ MY  C  M+ +  VF+     +
Sbjct: 493 VLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCD 552

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
            + W +++ G+ Q+G  E+ L +   M + G+ P   TF+  + +  +L    +G   HA
Sbjct: 553 AVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHA 612

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +I+       F+ ++++DMY   G +  A++    + +S   VSW A I G+  +  T 
Sbjct: 613 YLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGI-QSPDIVSWTAMIMGYALHGPTT 671

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACS--------------------LLPSLATC--- 440
           EA   F +M   +   +  T+ ++L ACS                     +PSL  C   
Sbjct: 672 EAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAAL 731

Query: 441 ----------EQIHSRIVKSKFESNVHVGSSLIEA----YNKCGSWEDAERVFSQLTAAD 486
                     ++ ++ I + K +    V S+L+ A     N   + E A+++F +L    
Sbjct: 732 ADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF-ELEPKS 790

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           + S   +   YS +GR  +A  L + M ++G++
Sbjct: 791 MGSHVILSNMYSASGRWNEAAQLRKSMRIKGMK 823


>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 184/575 (32%), Positives = 300/575 (52%), Gaps = 19/575 (3%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAK-CGDIKSMVAVVKQ-------MPYLDIASCNC 188
           ++ HA +  + +  D+FV + +   + K  G +      + Q       +PY      N 
Sbjct: 22  KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPY------NT 75

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           L+A YA +     AF  + ++ G    P+ YT+  +L  C     + EG+Q+H   +K+ 
Sbjct: 76  LIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMG 135

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
           +L    V N+LL  Y  CG    A  VF+ ++ R+V+SWT +I+G+ + G +++ + L  
Sbjct: 136 FLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFL 195

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
            M    + PN  TF   L +C  +    MG   H  V KR   +G  VG A+VDMY    
Sbjct: 196 KMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCE 252

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + EA+K   E+      VSW + I+G  + ++ ++++E F  M  +    D    +S+L
Sbjct: 253 CLCEARKLFDEL-PDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVL 311

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC+ L +L     +   I +   E ++H+G++L++ Y KCG  E A  +F+ +   ++ 
Sbjct: 312 SACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIF 371

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +WN+++   + +G   +A+  FE M+  GIRP   TFLA+L+AC HSGLV +G+  F  M
Sbjct: 372 TWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQM 431

Query: 549 VKE-YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK 607
           + + +   P   HY CM+DLL RAG L+ A  FI N+P+ P   IW  L +AC+ + +++
Sbjct: 432 ISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVE 491

Query: 608 MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVY 667
           +++ I   +LEL   D+ VYV LSN+YA      D    R+LMK K I K PG S IEV 
Sbjct: 492 LSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEVD 551

Query: 668 NKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
            + + F   + +HS    ++  L  L  Q+   GH
Sbjct: 552 GEAHEFLVGDTNHSRNEDIHILLNILANQVYLEGH 586



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 3/189 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VLS C+    L+ GR     I +  +  D  +  +LV+MYAKCG I+  + + 
Sbjct: 303 DRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIF 362

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  +I + N LL G A +    +A   F  + G  ++PN  T+  +L  C     + 
Sbjct: 363 NGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVA 422

Query: 236 EGKQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG+    Q +     +  +      ++ +  + G++++A      + +  +V+ W A+++
Sbjct: 423 EGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLS 482

Query: 293 GFKQHGDYE 301
             K +G+ E
Sbjct: 483 ACKANGNVE 491


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 183/560 (32%), Positives = 301/560 (53%), Gaps = 5/560 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI +L   +  E  E+ RR H    K  +        +LV+ Y KCG +K++  V  +  
Sbjct: 115 VISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETV 174

Query: 180 YLDIASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             +  S N ++ G A K   +D   +F + +D    QPN  T S++L +   L     GK
Sbjct: 175 EKNEVSWNSIINGLACKGRCWDALNAFRMMIDA-GAQPNSVTISSILPVLVELECFKAGK 233

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H  +M++   +   ++N+L+ MY K G   +A ++F  L +RN++SW A+I  +  + 
Sbjct: 234 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 293

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + +R V  M+E G  PN  TFT  L +CA L     G   HA  ++ G+    FV  
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G +  A+       K    VS+N  I G+       +++  FS+M      
Sbjct: 354 SLIDMYAKCGCLHSARNVFNTSRK--DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 411

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  ++  ++ AC+ L +L   +++H   +++   S++ V +SL++ Y KCG  + A R+
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F+Q+   DV SWN+MI  Y   G    AI +FE M  + ++    +++AVLSACSH GLV
Sbjct: 472 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 531

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G + F  M+ +  + P E HY+CMVDLLGRAG +E A   I  LPI P A IW  L  
Sbjct: 532 ERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 590

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR + ++++    ++ + EL P     Y+ LSN+YAE G   +A + R+LMK +   K 
Sbjct: 591 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 650

Query: 659 PGCSWIEVYNKIYRFFSQNK 678
           PGCSW+++Y++++ F ++ +
Sbjct: 651 PGCSWVQIYDQVHAFVAEER 670



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 18/484 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      VL  CS    +  G   H ++ K     D +V  +L+ +Y  CG +     +
Sbjct: 8   LDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRL 67

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQA--FSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
             +MP  D+ S N ++   + N  + +A  + F++ L  + ++PN  +  ++L I  +L 
Sbjct: 68  FDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLLPISAALE 126

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
             +  +++H  ++K+   S+    NAL+  Y KCG ++    VF   V++N +SW +IIN
Sbjct: 127 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 186

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G    G     L    +M + G  PN  T +  L     L     G   H   ++ G   
Sbjct: 187 GLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET 246

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F+  +++DMY+  G   EA      + +  + VSWNA IA +  N+   EAI    QM
Sbjct: 247 DIFIANSLIDMYAKSGHSTEASTIFHNLDRR-NIVSWNAMIANYALNRLPLEAIRFVIQM 305

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  +  T++++L AC+ L  L   ++IH+  V+    S++ V +SLI+ Y KCG  
Sbjct: 306 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 365

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A  VF+  +  D VS+N +I  YS+     +++ LF +M + G +P   +F+ V+SAC
Sbjct: 366 HSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 424

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYS------CMVDLLGRAGKLEIALIFISNLPI 586
           ++   ++ G++V       +G+      YS       ++D   + G+++IA    + +  
Sbjct: 425 ANLAALKQGKEV-------HGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 477

Query: 587 KPTA 590
           K  A
Sbjct: 478 KDVA 481



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 3/365 (0%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           VQ + +T+  +L +C     I +G ++H    KL + +   V N LL +Y  CG + DA 
Sbjct: 6   VQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDAR 65

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDY-EKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
            +F+ + +R+V+SW  II     +GDY E       ++    I PN  +    L   A+L
Sbjct: 66  RLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAAL 125

Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
            +  M    H   +K G+        A+VD Y   G + +A  Q+       + VSWN+ 
Sbjct: 126 EDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSV-KALWQVFNETVEKNEVSWNSI 184

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           I G     +  +A+ AF  M+   A  +  T SSIL     L      ++IH   ++   
Sbjct: 185 INGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGT 244

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           E+++ + +SLI+ Y K G   +A  +F  L   ++VSWN+MI  Y+ N    +AI    +
Sbjct: 245 ETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQ 304

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M   G  P   TF  VL AC+  G +  G+++  +M    G+  +    + ++D+  + G
Sbjct: 305 MQETGECPNAVTFTNVLPACARLGFLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMYAKCG 363

Query: 573 KLEIA 577
            L  A
Sbjct: 364 CLHSA 368



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   G+  +++TF   L  C+   +   G   H  V K G     +VG  ++ +Y   G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + +A++   EM +    VSWN  I     N    EA   +  M+            +++ 
Sbjct: 61  LNDARRLFDEMPER-DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-----IKPNLVS 114

Query: 430 ACSLLPSLATCE------QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
             SLLP  A  E      +IH   VK   +S V   ++L++AY KCGS +   +VF++  
Sbjct: 115 VISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETV 174

Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
             + VSWNS+I   +  GR   A+  F  M+  G +P + T  ++L
Sbjct: 175 EKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSIL 220



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 5/193 (2%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           MVR     D+ T+  +LK CS    +    ++H  + K  F+++V+VG++L+  Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
             DA R+F ++   DVVSWN++I   S NG   +A   +  M++  +   N   ++V+S 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPN--LVSVISL 118

Query: 532 CSHSGLVQDGQ--KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
              S  ++D +  +       + G+  +    + +VD  G+ G ++ AL  + N  ++  
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVK-ALWQVFNETVEKN 177

Query: 590 APIWRPLFAACRC 602
              W  +     C
Sbjct: 178 EVSWNSIINGLAC 190


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 187/562 (33%), Positives = 298/562 (53%), Gaps = 43/562 (7%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           +S +L  C S +++  GKQLH+  +     S   +SN LL +Y KCG ++ A ++F  + 
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 281 QRNVISWTAIINGFKQHGDY-------------------------------EKPLRLVCL 309
           ++N++S   +ING+ + GD+                               E+ L L   
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M E G  P+E+     L  CA LR    G   H  V K G      V +++  MY   G 
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + E ++ ++ M  S + V+WN  IAG  +N   EE ++ ++ M       D+ T+ S++ 
Sbjct: 235 LGEGERLIRAM-PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVIS 293

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +CS L +L   +QIH+ ++K+     V V SSLI  Y++CG  E + +VF +    DVV 
Sbjct: 294 SCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVC 353

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           W+SMI AY  +GR  +AI LF +M  E +   + TFL++L ACSH GL + G K F+ MV
Sbjct: 354 WSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMV 413

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
           ++YG+ P   HY+CMVDLLGR G +E A   I ++P+K     W+ L +AC+ H   +MA
Sbjct: 414 EKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMA 473

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             IS+++  LDP D   YV LSN++A      D  + RK M+ +++ KEPG SW+EV N+
Sbjct: 474 RRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQ 533

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERL 718
           I++F   +KSH +  ++   L++L  +++  G+  +           +KE  +++HSE+L
Sbjct: 534 IHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKL 593

Query: 719 AVGFGLISLPAKNKFECSRTLE 740
           A+ F L+  P        + L 
Sbjct: 594 AIAFALLYTPVGTPIRVIKNLR 615



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 198/408 (48%), Gaps = 34/408 (8%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            +L  C  E  L LG++ H+LI  +    D+F++  L+N+Y+KCG + + + +   MP  
Sbjct: 57  HLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRK 116

Query: 182 DIASCNCLLAGYAKNA-------LFD------------------------QAFSFFLKLD 210
           +I SCN L+ GY ++        +FD                        +    F +++
Sbjct: 117 NIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMN 176

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
            +   P+ +   ++L  C  L A+  G+Q+H    K  +     V ++L  MY+KCG + 
Sbjct: 177 ELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLG 236

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           + E +   +  +NV++W  +I G  Q+G  E+ L    +M+  G  P++ TF   ++SC+
Sbjct: 237 EGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
            L     G   HA+VIK G +L   V ++++ MYS  G +  + K   E  ++   V W+
Sbjct: 297 ELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC-ENGDVVCWS 355

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV-K 449
           + IA +  + +  EAI+ F+QM +     ++ T+ S+L ACS         +    +V K
Sbjct: 356 SMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEK 415

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKA 496
              +  +   + +++   + GS E+AE +   +   ADV++W +++ A
Sbjct: 416 YGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSA 463



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 152/308 (49%), Gaps = 8/308 (2%)

Query: 114 LLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQF---VTASLVNMYAKCGDIK 169
            L  +F +  VL  C+    L  GR+ H  + K   CG +F   V +SL +MY KCG + 
Sbjct: 180 FLPDEFALGSVLRGCAGLRALVAGRQVHGYVRK---CGFEFNLVVVSSLAHMYMKCGSLG 236

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
               +++ MP  ++ + N L+AG A+N   ++    +  +     +P+  T+ ++++ C 
Sbjct: 237 EGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCS 296

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L+ + +G+Q+HA+ +K       +V ++L++MY +CG +E +  VF      +V+ W++
Sbjct: 297 ELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSS 356

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKR 348
           +I  +  HG   + + L   M ++ ++ N+ TF   L +C+       G   F   V K 
Sbjct: 357 MIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKY 416

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G+       T +VD+    G + EA+  ++ M   A  ++W   ++    ++KTE A   
Sbjct: 417 GVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRI 476

Query: 409 FSQMVRND 416
             ++ R D
Sbjct: 477 SEEVFRLD 484



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 5/211 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK   + V+S CS    L  G++ HA + K        V +SL++MY++CG ++  + V 
Sbjct: 284 DKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVF 343

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +    D+   + ++A Y  +    +A   F +++   ++ N  T+ ++L  C      +
Sbjct: 344 LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKE 403

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           +G +     M  +Y  K  + +   ++ +  + G +E+AE++   + V+ +VI+W  +++
Sbjct: 404 KGIKFF-DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLS 462

Query: 293 GFKQHGDYEKPLRLV-CLMREDGIDPNEYTF 322
             K H   E   R+   + R D  DP  Y  
Sbjct: 463 ACKIHKKTEMARRISEEVFRLDPRDPVPYVL 493


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 190/591 (32%), Positives = 306/591 (51%), Gaps = 15/591 (2%)

Query: 161 MYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           MY+K  D+ +   ++ Q+ P   + +   L++G  +N  F  A  +F K+   +++PN +
Sbjct: 1   MYSKL-DLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDF 59

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T+        +L     GKQ+HA  +KL  ++   V  +   MY K G+  +A+ +F+ +
Sbjct: 60  TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
             RNV  W A I+     G   K +      R  G +P+  TF   L +CA  R   +G 
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  VI+ G      V   I+D+Y    E+  A+     MG+  +SVSW   +A   +N
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRR-NSVSWCTMVAACEQN 238

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            + E+A   F    +      ++  SS++ A + +  L     +H+  VK+  E ++ VG
Sbjct: 239 DEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVG 298

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           S+L++ Y KCGS ED E+VF ++   ++VSWN+MI  Y+  G    A+ LFE+M  E + 
Sbjct: 299 SALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV- 357

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               T + VLSACS  G V+ G ++FESM   Y I P   HY+C+ D+LGRAG +E A  
Sbjct: 358 ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYE 417

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           F+  +PI+PT  +W  L  ACR + + ++ +  +  + +LDP D+  +V LSNM+A AG 
Sbjct: 418 FVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGR 477

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
             +A   RK MK   I K  GCSW+   NK++ F +++ SH    ++   L +L  +++ 
Sbjct: 478 WDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQA 537

Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
            G+            + EK   V YHSE++A+ FGLI+LP       ++ L
Sbjct: 538 AGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNL 588


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 181/573 (31%), Positives = 312/573 (54%), Gaps = 22/573 (3%)

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           S N L+    K     QA     +    +  P+  TY  ++  CG  S++ +  ++H   
Sbjct: 48  SNNQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           +         ++  L+ MY   G ++ A  VF+   +R +  W A+       G  E+ L
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163

Query: 305 RLVCLMREDGIDPNEYTFTVALASCA----SLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            L   M   G++ + +T+T  L +C     ++ +   G   HA + +RG +   ++ T +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR--NDAA 418
           VDMY+  G +  A      M    + VSW+A IA + +N K  EA+  F +M+R   D++
Sbjct: 224 VDMYARFGCVDYASYVFGGM-PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            +  T  S+L+AC+ L +L   + IH  I++   +S + V S+L+  Y +CG  E  +RV
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++   DVVSWNS+I +Y  +G  +KAI +FE+M+  G  PT  TF++VL ACSH GLV
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLV 402

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           ++G+++FE+M +++GI P+  HY+CMVDLLGRA +L+ A   + ++  +P   +W  L  
Sbjct: 403 EEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           +CR H ++++AE  S+++  L+P +A  YV L+++YAEA +  + +  +KL++ + + K 
Sbjct: 463 SCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKL 522

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EK 707
           PG  W+EV  K+Y F S ++ +  M +++  L +L + +++ G+              EK
Sbjct: 523 PGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEK 582

Query: 708 EDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           E  VL HSE+LA+ FGLI+         ++ L 
Sbjct: 583 ERIVLGHSEKLALAFGLINTSKGEPIRITKNLR 615



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 145/312 (46%), Gaps = 7/312 (2%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L    R H  I       D F+   L+ MY+  G +     V  +     I   
Sbjct: 87  CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC----GSLSAIDEGKQLHA 242
           N L          ++    + K++ I V+ + +TY+ +L  C     +++ + +GK++HA
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +  Y S   +   L+ MY + G ++ A  VF G+  RNV+SW+A+I  + ++G   +
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266

Query: 303 PLRLVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
            LR    M  +  D  PN  T    L +CASL     G + H  +++RG+     V +A+
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           V MY   G++   ++    M      VSWN+ I+ +  +   ++AI+ F +M+ N A+  
Sbjct: 327 VTMYGRCGKLEVGQRVFDRM-HDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385

Query: 421 EFTYSSILKACS 432
             T+ S+L ACS
Sbjct: 386 PVTFVSVLGACS 397



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 17/284 (5%)

Query: 123 VLSYCSREEC----LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           VL  C   EC    L  G+  HA +T+       ++  +LV+MYA+ G +     V   M
Sbjct: 184 VLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGM 243

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  ++ S + ++A YAKN    +A   F ++  +  D  PN  T  ++L  C SL+A+++
Sbjct: 244 PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +H   ++    S   V +AL+TMY +CG +E  + VF+ +  R+V+SW ++I+ +  
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
           HG  +K +++   M  +G  P   TF   L +C     SH G +   + +   M     +
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGAC-----SHEGLVEEGKRLFETMWRDHGI 418

Query: 357 GTAI------VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              I      VD+      + EA K +++M        W + + 
Sbjct: 419 KPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLG 462



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 4/185 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    LE G+  H  I +  +     V ++LV MY +CG ++    V  +M 
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+ S N L++ Y  +    +A   F ++      P   T+ ++L  C     ++EGK+
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 240 LHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
           L  +TM   +  K  + +   ++ +  +   +++A  + + +  +     W +++   + 
Sbjct: 408 LF-ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRI 466

Query: 297 HGDYE 301
           HG+ E
Sbjct: 467 HGNVE 471


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 183/560 (32%), Positives = 301/560 (53%), Gaps = 5/560 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           VI +L   +  E  E+ RR H    K  +        +LV+ Y KCG +K++  V  +  
Sbjct: 264 VISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETV 323

Query: 180 YLDIASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
             +  S N ++ G A K   +D   +F + +D    QPN  T S++L +   L     GK
Sbjct: 324 EKNEVSWNSIINGLACKGRCWDALNAFRMMIDA-GAQPNSVTISSILPVLVELECFKAGK 382

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           ++H  +M++   +   ++N+L+ MY K G   +A ++F  L +RN++SW A+I  +  + 
Sbjct: 383 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 442

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + +R V  M+E G  PN  TFT  L +CA L     G   HA  ++ G+    FV  
Sbjct: 443 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 502

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           +++DMY+  G +  A+       K    VS+N  I G+       +++  FS+M      
Sbjct: 503 SLIDMYAKCGCLHSARNVFNTSRK--DEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 560

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D  ++  ++ AC+ L +L   +++H   +++   S++ V +SL++ Y KCG  + A R+
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 620

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F+Q+   DV SWN+MI  Y   G    AI +FE M  + ++    +++AVLSACSH GLV
Sbjct: 621 FNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLV 680

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
           + G + F  M+ +  + P E HY+CMVDLLGRAG +E A   I  LPI P A IW  L  
Sbjct: 681 ERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLG 739

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR + ++++    ++ + EL P     Y+ LSN+YAE G   +A + R+LMK +   K 
Sbjct: 740 ACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKN 799

Query: 659 PGCSWIEVYNKIYRFFSQNK 678
           PGCSW+++Y++++ F ++ +
Sbjct: 800 PGCSWVQIYDQVHAFVAEER 819



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 18/484 (3%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           LD      VL  CS    +  G   H ++ K     D +V  +L+ +Y  CG +     +
Sbjct: 157 LDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRL 216

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQA--FSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
             +MP  D+ S N ++   + N  + +A  + F++ L  + ++PN  +  ++L I  +L 
Sbjct: 217 FDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-IKPNLVSVISLLPISAALE 275

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
             +  +++H  ++K+   S+    NAL+  Y KCG ++    VF   V++N +SW +IIN
Sbjct: 276 DEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIIN 335

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G    G     L    +M + G  PN  T +  L     L     G   H   ++ G   
Sbjct: 336 GLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET 395

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             F+  +++DMY+  G   EA      + +  + VSWNA IA +  N+   EAI    QM
Sbjct: 396 DIFIANSLIDMYAKSGHSTEASTIFHNLDRR-NIVSWNAMIANYALNRLPLEAIRFVIQM 454

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
                  +  T++++L AC+ L  L   ++IH+  V+    S++ V +SLI+ Y KCG  
Sbjct: 455 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 514

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A  VF+  +  D VS+N +I  YS+     +++ LF +M + G +P   +F+ V+SAC
Sbjct: 515 HSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 573

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYS------CMVDLLGRAGKLEIALIFISNLPI 586
           ++   ++ G++V       +G+      YS       ++D   + G+++IA    + +  
Sbjct: 574 ANLAALKQGKEV-------HGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILF 626

Query: 587 KPTA 590
           K  A
Sbjct: 627 KDVA 630



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 128/467 (27%), Positives = 213/467 (45%), Gaps = 17/467 (3%)

Query: 121 IEVLSYCSREECLELGRRYHAL-ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           I +L+ CS+ + L   ++ HAL I    +     + ASL+  YAK     S  ++  Q  
Sbjct: 58  INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQ-- 115

Query: 180 YLDIASC------NCLLAGY--AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
                +C      N L+  +  A N  FD  F  + ++    VQ + +T+  +L +C   
Sbjct: 116 --TFQNCRTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDS 172

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             I +G ++H    KL + +   V N LL +Y  CG + DA  +F+ + +R+V+SW  II
Sbjct: 173 FDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTII 232

Query: 292 NGFKQHGDY-EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
                +GDY E       ++    I PN  +    L   A+L +  M    H   +K G+
Sbjct: 233 GLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGL 292

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                   A+VD Y   G + +A  Q+       + VSWN+ I G     +  +A+ AF 
Sbjct: 293 DSQVTTCNALVDAYGKCGSV-KALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFR 351

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M+   A  +  T SSIL     L      ++IH   ++   E+++ + +SLI+ Y K G
Sbjct: 352 MMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSG 411

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
              +A  +F  L   ++VSWN+MI  Y+ N    +AI    +M   G  P   TF  VL 
Sbjct: 412 HSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLP 471

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           AC+  G +  G+++  +M    G+  +    + ++D+  + G L  A
Sbjct: 472 ACARLGFLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 517



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 36/331 (10%)

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT-AVSNALLTMYIK-------CGM-- 268
           Y +  +L +C  + ++ + KQ+HA  +   +L ++ ++  +L+  Y K       C +  
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 269 --MEDAESVF--EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
              ++  + F    L++ + I+W    +GF+ +            M   G+  +++TF  
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNR----------MVRRGVQLDDHTFPF 164

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L  C+   +   G   H  V K G     +VG  ++ +Y   G + +A++   EM +  
Sbjct: 165 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER- 223

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE--- 441
             VSWN  I     N    EA   +  M+            +++   SLLP  A  E   
Sbjct: 224 DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV-----IKPNLVSVISLLPISAALEDEE 278

Query: 442 ---QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              +IH   VK   +S V   ++L++AY KCGS +   +VF++    + VSWNS+I   +
Sbjct: 279 MTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLA 338

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
             GR   A+  F  M+  G +P + T  ++L
Sbjct: 339 CKGRCWDALNAFRMMIDAGAQPNSVTISSIL 369



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 15/221 (6%)

Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
           A S++WN    GF          E +++MVR     D+ T+  +LK CS    +    ++
Sbjct: 132 AHSIAWNGTFDGF----------ETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEV 181

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H  + K  F+++V+VG++L+  Y  CG   DA R+F ++   DVVSWN++I   S NG  
Sbjct: 182 HGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDY 241

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ--KVFESMVKEYGILPEEAHY 561
            +A   +  M++  +   N   ++V+S    S  ++D +  +       + G+  +    
Sbjct: 242 TEARNYYFWMILRSVIKPN--LVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTC 299

Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           + +VD  G+ G ++ AL  + N  ++     W  +     C
Sbjct: 300 NALVDAYGKCGSVK-ALWQVFNETVEKNEVSWNSIINGLAC 339


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 191/620 (30%), Positives = 314/620 (50%), Gaps = 13/620 (2%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L   ++ H L+ +  +  D ++   L+         +    V  Q P+ +I   N L+ G
Sbjct: 16  LHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRG 75

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA-IDEGKQLHAQTMKLQYLS 251
              N  F  A S +  +      P+++T+  +L  C  L      G  LH+  +K  +  
Sbjct: 76  MVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDW 135

Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
              V   L+ +Y K G + DA  VF+ + ++NV+SWTAII G+ + G + + L L   + 
Sbjct: 136 DVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLL 195

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
           E G+ P+ +T    L +C+ + +   G      + + G     FV T++VDMY+  G + 
Sbjct: 196 EMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSME 255

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           EA++    M +    V W+A I G+  N   +EA++ F +M R +   D +    +  AC
Sbjct: 256 EARRVFDGMVEK-DVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC 314

Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
           S L +L         +   +F SN  +G++LI+ Y KCGS   A+ VF  +   D V +N
Sbjct: 315 SRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFN 374

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           ++I   +  G    A  +F +MV  G++P  +TF+ +L  C+H+GLV DG + F  M   
Sbjct: 375 AVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSV 434

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           + + P   HY CMVDL  RAG L  A   I ++P++  + +W  L   CR H D ++AE 
Sbjct: 435 FSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEH 494

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
           + KQ++EL+P ++  YV LSN+Y+ +    +AE+ R  +  K + K PGCSW+EV   ++
Sbjct: 495 VLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVH 554

Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVLY---HSERLAV 720
            F   + SH    K+YEKL+ L + + + G+         D E+E++  +   HSE+LAV
Sbjct: 555 EFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAV 614

Query: 721 GFGLISLPAKNKFECSRTLE 740
            F LIS  AK+     + L 
Sbjct: 615 AFALISTGAKDVIRVVKNLR 634



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 155/314 (49%), Gaps = 2/314 (0%)

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L ++ + KQ H   ++L     T + N LL   +     + A  VF      N+  +  
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNT 71

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKR 348
           +I G   +  +   + +   MR+ G  P+ +TF   L +C  L +  H+G   H+ VIK 
Sbjct: 72  LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G     FV T +V +YS  G + +A+K   E+    + VSW A I G+  +    EA+  
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEI-PEKNVVSWTAIICGYIESGCFGEALGL 190

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F  ++      D FT   IL ACS +  LA+   I   + +S    NV V +SL++ Y K
Sbjct: 191 FRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAK 250

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CGS E+A RVF  +   DVV W+++I+ Y+ NG  ++A+ +F +M  E +RP     + V
Sbjct: 251 CGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGV 310

Query: 529 LSACSHSGLVQDGQ 542
            SACS  G ++ G 
Sbjct: 311 FSACSRLGALELGN 324



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 14/329 (4%)

Query: 94  GFIDDGC-SNTVPVTCYSLESLL--DKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
           G+I+ GC    + +    LE  L  D   ++ +L  CSR   L  GR     + ++   G
Sbjct: 177 GYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVG 236

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + FV  SLV+MYAKCG ++    V   M   D+   + L+ GYA N +  +A   F ++ 
Sbjct: 237 NVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQ 296

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
             +V+P+ Y    + + C  L A++ G          ++LS   +  AL+  Y KCG + 
Sbjct: 297 RENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVA 356

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A+ VF+G+ +++ + + A+I+G    G       +   M + G+ P+  TF   L  C 
Sbjct: 357 QAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGC- 415

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAI------VDMYSGLGEIWEAKKQLKEMGKSA 384
               +H G +        GM+    V   I      VD+ +  G + EA+  ++ M   A
Sbjct: 416 ----THAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEA 471

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           +S+ W A + G   ++ T+ A     Q++
Sbjct: 472 NSIVWGALLGGCRLHKDTQLAEHVLKQLI 500


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 1011

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 197/659 (29%), Positives = 333/659 (50%), Gaps = 59/659 (8%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           HAL  K            L+ +YAK  ++     +  ++P  +  +   L++G+A+    
Sbjct: 312 HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSS 371

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           +  F+ F ++      PN YT S++L  C   + +  GK +HA  ++        + N++
Sbjct: 372 EMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSI 431

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL--------------- 304
           L +Y+KC + E AE +FE + + +V+SW  +I  + + GD EK L               
Sbjct: 432 LDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWN 491

Query: 305 -----------------RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
                            +L C M E G + +  TF++AL   +SL +  +G   H  V+K
Sbjct: 492 TIVDGLLQCGYERHALEQLYC-MVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM-------GKS--------ASSVSWNAQ 392
            G     F+ +++V+MY   G + +A   L+++       G +        A  VSW + 
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           ++G+  N K E+ ++ F  MVR     D  T ++I+ AC+    L     +H+ + K   
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH 670

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
             + +VGSSLI+ Y+K GS +DA  VF Q    ++V W SMI  Y+ +G+   AI LFE+
Sbjct: 671 RIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEE 730

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+ +GI P   TFL VL+ACSH+GL+++G + F  M   Y I P   H + MVDL GRAG
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAG 790

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
            L     FI    I     +W+   ++CR H +++M +++S+ +L++ P D   YV LSN
Sbjct: 791 HLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSN 850

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           M A      +A   R LM  + + K+PG SWI++ ++I+ F   ++SH +  ++Y  L  
Sbjct: 851 MCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDI 910

Query: 693 LMQQIEDIGHTDN---------EKEDRVL--YHSERLAVGFGLISLPAKNKFECSRTLE 740
           L+ ++++IG++ +         E++  VL  +HSE+LAV FG+I+   +      + L 
Sbjct: 911 LIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLR 969



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 210/463 (45%), Gaps = 57/463 (12%)

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LHA  +K   L     +N LLT+Y K   M  A+ +F+ + QRN  +WT +I+GF + G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            E    L   M+  G  PN+YT +  L  C+   N  +G   HA +++ G+ +   +G +
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           I+D+Y    +++E  ++L E+      VSWN  I  + R    E++++ F ++   D   
Sbjct: 431 ILDLYLKC-KVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVS 489

Query: 420 ----------------------------DEF---TYSSILKACSLLPSLATCEQIHSRIV 448
                                        EF   T+S  L   S L  +    Q+H  ++
Sbjct: 490 WNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVL 549

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAE----------------RVFSQLTAADVVSWNS 492
           K  F+S+  + SSL+E Y KCG  + A                 RV  +   A +VSW S
Sbjct: 550 KFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGS 609

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           M+  Y  NG+    +  F  MV E +     T   ++SAC+++G+++ G+ V  + V++ 
Sbjct: 610 MVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHV-HAYVQKI 668

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFI--SNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           G   +    S ++D+  ++G L+ A +    SN   +P   +W  + +    H     A 
Sbjct: 669 GHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSN---EPNIVMWTSMISGYALHGQGMHAI 725

Query: 611 FISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
            + +++L   + P++   ++ + N  + AGL  +     ++MK
Sbjct: 726 GLFEEMLNQGIIPNEVT-FLGVLNACSHAGLIEEGCRYFRMMK 767



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 196/434 (45%), Gaps = 43/434 (9%)

Query: 32  NHRKTVEVKEPFASYSACQLFNKSPKR------------AGLSTSDLIFNGYMNIEEKGI 79
           NH  T+  K    ++ A +LF++ P+R            A   +S+++FN +  ++ KG 
Sbjct: 328 NHLLTLYAKSNNMAH-AQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGA 386

Query: 80  SRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVI--EVLSYCSREECLELGR 137
             N Y T +       +D+       V  + L + +D   V+   +L    + +  E   
Sbjct: 387 CPNQY-TLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAE 445

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           R   L+ +    GD      ++  Y + GD++  + + +++PY D+ S N ++ G  +  
Sbjct: 446 RLFELMNE----GDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCG 501

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
               A      +     + +  T+S  L +  SLS ++ G+QLH   +K  + S   + +
Sbjct: 502 YERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRS 561

Query: 258 ALLTMYIKCGMMEDAESVFEGL---VQR-------------NVISWTAIINGFKQHGDYE 301
           +L+ MY KCG M+ A  +   +   V R              ++SW ++++G+  +G YE
Sbjct: 562 SLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYE 621

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             L+   LM  + +  +  T T  +++CA+      G   HA V K G  +  +VG++++
Sbjct: 622 DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLI 681

Query: 362 DMYSGLGEI---WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           DMYS  G +   W   +Q  E     + V W + I+G+  + +   AI  F +M+     
Sbjct: 682 DMYSKSGSLDDAWMVFRQSNE----PNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGII 737

Query: 419 CDEFTYSSILKACS 432
            +E T+  +L ACS
Sbjct: 738 PNEVTFLGVLNACS 751



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 30/323 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD---------- 182
           +ELGR+ H ++ K     D F+ +SLV MY KCG +     +++ +P LD          
Sbjct: 538 VELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVP-LDVLRKGNARVS 596

Query: 183 -------IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
                  I S   +++GY  N  ++     F  +    V  +  T +T+++ C +   ++
Sbjct: 597 YKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILE 656

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+ +HA   K+ +     V ++L+ MY K G ++DA  VF    + N++ WT++I+G+ 
Sbjct: 657 FGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYA 716

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM----FHAQVIKRGMA 351
            HG     + L   M   GI PNE TF   L +C     SH G +     + +++K    
Sbjct: 717 LHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNAC-----SHAGLIEEGCRYFRMMKDAYC 771

Query: 352 LGDFVG--TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           +   V   T++VD+Y   G + + K  + + G S  +  W + ++   R  K  E  +  
Sbjct: 772 INPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSS-CRLHKNVEMGKWV 830

Query: 410 SQMVRNDAACDEFTYSSILKACS 432
           S+M+   A  D   Y  +   C+
Sbjct: 831 SEMLLQVAPSDPGAYVLLSNMCA 853



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 4/191 (2%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           ++D + V  ++S C+    LE GR  HA + K     D +V +SL++MY+K G +     
Sbjct: 636 VVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWM 695

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V +Q    +I     +++GYA +     A   F ++    + PN  T+  +L  C     
Sbjct: 696 VFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGL 755

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAI 290
           I+EG + + + MK  Y     V +  +++ +Y + G +   ++ +F+  +      W + 
Sbjct: 756 IEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSF 814

Query: 291 INGFKQHGDYE 301
           ++  + H + E
Sbjct: 815 LSSCRLHKNVE 825


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 206/666 (30%), Positives = 340/666 (51%), Gaps = 46/666 (6%)

Query: 120 VIEVLSYCSR--EECLELGRRYHALITKTAVCG---DQFVTASLVNMYAKCG--DIKSMV 172
           ++ VL  CS   ++   LGR  HA   K        ++F   +L++MYA+ G  D    +
Sbjct: 155 LVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRL 214

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
                    D+ + N +++   +    ++A      +  + V+P+  T+++ L  C  L 
Sbjct: 215 FFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLE 274

Query: 233 AIDEGKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQ--RNVISWTA 289
            +  G+++HA  +K   L+  + V++AL+ MY     +  A  VF+ + +  R +  W A
Sbjct: 275 LLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNA 334

Query: 290 IINGFKQHGDY-EKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           +I G+ QHG   E+ + L   M  E G  P+E T    L +CA           H  V+K
Sbjct: 335 MICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVK 394

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
           R MA   FV  A++DMY+ LG + EA   +  M      VSWN  I G        EA +
Sbjct: 395 RDMASNRFVQNALMDMYARLGRMDEAHT-IFAMIDLRDIVSWNTLITGCIVQGLISEAFQ 453

Query: 408 AFSQM-VRNDAACDE-------------------FTYSSILKACSLLPSLATCEQIHSRI 447
              +M + + AA  E                    T  ++L  C++L + A  ++IH   
Sbjct: 454 LVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYA 513

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
           V+   ES++ VGS+L++ Y KCG    A  VF +L   +V++WN +I AY  +G   +A+
Sbjct: 514 VRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEAL 573

Query: 508 ILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
            LF++MV  G   P   TF+A L+ACSHSGLV  G ++F+ M ++YG  P    ++C+VD
Sbjct: 574 ALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVD 633

Query: 567 LLGRAGKLEIALIFISNL-PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAA 625
           +LGRAG+L+ A   IS++ P +     W  +  ACR H ++K+    ++++ EL+PD+A+
Sbjct: 634 VLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEAS 693

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            YV L N+Y+ AGL  ++ E R +M+ + ++KEPGCSWIE+   I+RF +   +H E  +
Sbjct: 694 HYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQ 753

Query: 686 VYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNKFE 734
           V+  +  L +++   G+  +           EK   + YHSE+LA+ FGL+  P      
Sbjct: 754 VHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIR 813

Query: 735 CSRTLE 740
            ++ L 
Sbjct: 814 VAKNLR 819



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 228/478 (47%), Gaps = 57/478 (11%)

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMP--------YLDIASCNCLLA--GYAKNALFDQAF 203
           V+ +L+  YA+CGD+ + +A+    P        Y  + S  CL    G+A +AL D   
Sbjct: 87  VSNALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDML- 145

Query: 204 SFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL----HAQTMKLQYLSKTAVS--- 256
                    D + + +T  ++L  C  L+  D+G +L    HA  +K  +L K       
Sbjct: 146 --------ADHEVSSFTLVSVLLACSHLA--DQGHRLGREAHAFALKHGFLDKGRERFPF 195

Query: 257 NALLTMYIKCGMMEDAESVF--EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           NALL+MY + G+++DA+ +F   G    ++++W  +I+   Q G  E+ ++++  M   G
Sbjct: 196 NALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALG 255

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGTAIVDMYSGLGEIWEA 373
           + P+  TF  AL +C+ L    +G   HA V+K   +A   FV +A+VDMY+   ++  A
Sbjct: 256 VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHA 315

Query: 374 KKQLKEMGKSASSVS-WNAQIAGFFRNQKT-EEAIEAFSQMVRNDAAC--DEFTYSSILK 429
           ++    + +    +  WNA I G+ ++    EEAIE FS+M   +A C   E T + +L 
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRM-EAEAGCAPSETTMAGVLP 374

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           AC+        E +H  +VK    SN  V ++L++ Y + G  ++A  +F+ +   D+VS
Sbjct: 375 ACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVS 434

Query: 490 WNSMIKAYSQNGRARKAIILFEKM------------------VVEGIR--PTNSTFLAVL 529
           WN++I      G   +A  L  +M                   V+G R  P N T + +L
Sbjct: 435 WNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLL 494

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
             C+       G+++    V+ + +  + A  S +VD+  + G L +A      LP +
Sbjct: 495 PGCAVLAAPARGKEIHGYAVR-HALESDLAVGSALVDMYAKCGCLALARAVFDRLPRR 551



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 182/402 (45%), Gaps = 24/402 (5%)

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT--AVSNALLTMYIKCGMMEDAES 274
           +H+     +    +L      + +H  +++   L +   AVSNALLT Y +CG ++ A +
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 275 VFEGLVQ--RNVISWTAIING---FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
           +F       R+ +S+ ++I+    F++ G     LR +    E     + +T    L +C
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHE----VSSFTLVSVLLAC 162

Query: 330 ASL--RNSHMGYMFHAQVIKRGM---ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           + L  +   +G   HA  +K G        F   A++ MY+ LG + +A++     G   
Sbjct: 163 SHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGV 222

Query: 385 SS-VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
              V+WN  I+   +  + EEA++    MV      D  T++S L ACS L  L    ++
Sbjct: 223 GDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREV 282

Query: 444 HSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT--AADVVSWNSMIKAYSQN 500
           H+ ++K     +N  V S+L++ Y        A RVF  +      +  WN+MI  Y+Q+
Sbjct: 283 HAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQH 342

Query: 501 GRA-RKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           G    +AI LF +M  E G  P+ +T   VL AC+ S  V  G++     V +  +    
Sbjct: 343 GGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSE-VFTGKEAVHGYVVKRDMASNR 401

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
              + ++D+  R G+++ A    + + ++     W  L   C
Sbjct: 402 FVQNALMDMYARLGRMDEAHTIFAMIDLRDIVS-WNTLITGC 442


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 205/671 (30%), Positives = 337/671 (50%), Gaps = 98/671 (14%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLK 208
           D     +L+  Y+  GD+K    +    P    D    N ++  Y+ N     A   F  
Sbjct: 78  DIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCD 137

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEG----KQLHAQTMKLQYLSKTAVSNALLTMYI 264
           +   + +P++YT++++L   G+L+ + E     +QLH   +K      T+V NAL++ Y+
Sbjct: 138 MQRDNFRPDNYTFTSVL---GALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYV 194

Query: 265 KCG---------MMEDAESVFEGLVQRNVISWTAIINGFKQHGD---------------- 299
           KC          +M +A  +F+ +  R+ +SWT II G+ ++ D                
Sbjct: 195 KCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLG 254

Query: 300 ---------------YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
                          Y +   +   M    I  +E+TFT  ++ CA+     +G   HA 
Sbjct: 255 VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAY 314

Query: 345 VIKR----GMALGDFVGTAIVDMYSGLGEI-----------------W------------ 371
            +K        +   V  A++  Y   G++                 W            
Sbjct: 315 FLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRC 374

Query: 372 --EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSIL 428
             EAK    EM +  + +SW   I+G  +    EEA++ F++M ++    CD + ++  +
Sbjct: 375 MDEAKSFFNEMPEK-NILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCD-YAFAGAI 432

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            +CS+L SL    Q+H+++V+  +ES++  G++LI  Y +CG  + A  +F  +   D +
Sbjct: 433 ISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAI 492

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SWN+MI A  Q+G+  +AI LFE+M+ EGI P   +FL V+SACSH+GLV++G+K F+SM
Sbjct: 493 SWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSM 552

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
              YG+ P+E HY+ ++DLL RAGK   A   + ++P +P APIW  L A CR H ++ +
Sbjct: 553 HNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDL 612

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
               ++++ EL P     YV LSNMYA AG   D  + RKLM+ + + KEPGCSWIEV N
Sbjct: 613 GIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVEN 672

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSER 717
           K++ F   + +H E+ ++Y  L+QL+ ++  IG+  +            KE  +  HSE+
Sbjct: 673 KVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEK 732

Query: 718 LAVGFGLISLP 728
           LAV +G + LP
Sbjct: 733 LAVAYGFMKLP 743



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 73/424 (17%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISR---NGYSTRNDSFPDGFIDDGCSNTV 104
           A +LF++ P R  LS + +I  GY+   +   ++   NG S +     +  I       +
Sbjct: 211 ARKLFDEMPNRDELSWTTII-TGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGL 269

Query: 105 PVTCYSL-------ESLLDKQFVIEVLSYCSREECLELGRRYHALITKT----AVCGDQF 153
            +  + +       +  LD+     V+S C+   C  LG+  HA   KT    A      
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMP 329

Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF------- 206
           V  +L+  Y KCG +     +  +MP  D+ S N +L+GY      D+A SFF       
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389

Query: 207 --------------------------LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
                                     +KL G   +P  Y ++  +  C  L ++  G+QL
Sbjct: 390 ILSWIIMISGLAQIGFAEEALKFFNRMKLQGF--EPCDYAFAGAIISCSVLGSLKHGRQL 447

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           HAQ ++  Y S  +  NAL+TMY +CG+++ A  +F  +   + ISW A+I    QHG  
Sbjct: 448 HAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQG 507

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA- 359
            + + L   M ++GI P+  +F   +++C+           HA ++K G    D +    
Sbjct: 508 TQAIELFEEMLKEGILPDRISFLTVISACS-----------HAGLVKEGRKYFDSMHNVY 556

Query: 360 -----------IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
                      I+D+    G+  EAK+ ++ M     +  W A +AG   +   +  IEA
Sbjct: 557 GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEA 616

Query: 409 FSQM 412
             ++
Sbjct: 617 AERL 620



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 112/513 (21%), Positives = 210/513 (40%), Gaps = 89/513 (17%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           QP  +  + ++ I    S ++  + L  +  +   +++T     L+  Y   G ++ +  
Sbjct: 45  QPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTT----LIAAYSAAGDLKLSRK 100

Query: 275 VFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
           +F    L  R+ + + A+I  +  + D    + L C M+ D   P+ YTFT  L + A +
Sbjct: 101 IFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALV 160

Query: 333 --RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE---------IWEAKKQLKEM- 380
             +  H   + H  V+K G      V  A++  Y              + EA+K   EM 
Sbjct: 161 AEKEKHCQQL-HCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMP 219

Query: 381 ----------------------------GKSAS-SVSWNAQIAGFFRNQKTEEAIEAFSQ 411
                                       G S    V+WNA I+G+       EA E F +
Sbjct: 220 NRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRK 279

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS----KFESNVHVGSSLIEAYN 467
           M+ +    DEFT++S++  C+        +++H+  +K+      +  + V ++LI  Y 
Sbjct: 280 MIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYW 339

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAY------------------------------ 497
           KCG  + A+ +F+++   D+VSWN ++  Y                              
Sbjct: 340 KCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISG 399

Query: 498 -SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
            +Q G A +A+  F +M ++G  P +  F   + +CS  G ++ G+++   +V+ YG   
Sbjct: 400 LAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVR-YGYES 458

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
             +  + ++ +  R G ++ A     N+P    A  W  + AA   H     A E   + 
Sbjct: 459 SLSAGNALITMYARCGVVDAAHCLFINMPC-VDAISWNAMIAALGQHGQGTQAIELFEEM 517

Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
           + E    D   ++T+ +  + AGL    +E RK
Sbjct: 518 LKEGILPDRISFLTVISACSHAGL---VKEGRK 547



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 35/143 (24%)

Query: 424 YSSILKACSLLP--SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           Y S+L+ C L    S +    +H+ ++ S F+   H+ + LI+ Y+K      A  +F +
Sbjct: 14  YGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDE 73

Query: 482 LTAADVVS---------------------------------WNSMIKAYSQNGRARKAII 508
           +   D+V+                                 +N+MI AYS N     AI 
Sbjct: 74  IPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIE 133

Query: 509 LFEKMVVEGIRPTNSTFLAVLSA 531
           LF  M  +  RP N TF +VL A
Sbjct: 134 LFCDMQRDNFRPDNYTFTSVLGA 156


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 170/514 (33%), Positives = 288/514 (56%), Gaps = 13/514 (2%)

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+HA  +    L    ++N LL  Y +   ++DA S+F+GL  R+  +W+ ++ GF + 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GD+         +   G+ P+ YT    + +C    +  +G + H  V+K G+    FV 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            ++VDMY+    + +A++  + M  S   V+W   I G + +    E++  F +M     
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERM-LSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGV 197

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+    +++ AC+ L ++      +  IV++ F  +V +G+++I+ Y KCGS E A  
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF ++   +V+SW++MI AY  +GR + AI LF  M+   I P   TF+++L ACSH+GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           +++G + F SM +E+ + P+  HY+CMVDLLGRAG+L+ AL  I  + ++    +W  L 
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
            ACR HS +++AE  +  +LEL P +   YV LSN+YA+AG      + R +M  +++ K
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEK 707
            PG +WIEV NK Y+F   ++SH +  ++YE L  L++++E  G+           + E 
Sbjct: 438 IPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEV 497

Query: 708 EDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
           +  +LY HSE+LA+ FGLI++P       S+ L 
Sbjct: 498 KQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLR 531



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 204/440 (46%), Gaps = 39/440 (8%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA +       D  +   L+  YA+   I    ++   +   D  + + ++ G+AK 
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                 ++ F +L    V P++YT   ++  C   + +  G+ +H   +K   LS   V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
            +L+ MY KC ++EDA+ +FE ++ +++++WT +I  +     YE  L L   MRE+G+ 
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVV 198

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           P++      + +CA L   H     +  +++ G +L   +GTA++DMY+  G +  A++ 
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              M K  + +SW+A IA +  + + ++AI+ F  M+      +  T+ S+L ACS    
Sbjct: 259 FDRM-KEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACS---- 313

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
                  H+ ++    E  +   +S+         WE+           DV  +  M+  
Sbjct: 314 -------HAGLI----EEGLRFFNSM---------WEE------HAVRPDVKHYTCMVDL 347

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
             + GR  +A+ L E M VE        + A+L AC     ++  +K   S+++   + P
Sbjct: 348 LGRAGRLDEALRLIEAMTVE---KDERLWSALLGACRIHSKMELAEKAANSLLE---LQP 401

Query: 557 EE-AHYSCMVDLLGRAGKLE 575
           +   HY  + ++  +AGK E
Sbjct: 402 QNPGHYVLLSNIYAKAGKWE 421



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 154/361 (42%), Gaps = 36/361 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V+  C     L++GR  H ++ K  +  D FV ASLV+MYAKC  ++    + ++M   D
Sbjct: 107 VIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKD 166

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + +   ++  YA    + ++   F ++    V P+     T++  C  L A+   +  + 
Sbjct: 167 LVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFAND 225

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++  +     +  A++ MY KCG +E A  VF+ + ++NVISW+A+I  +  HG  + 
Sbjct: 226 YIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKD 285

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L  +M    I PN  TF   L +C+           HA +I+ G+            
Sbjct: 286 AIDLFHMMLSCAILPNRVTFVSLLYACS-----------HAGLIEEGLRF---------- 324

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
                  +WE      E         +   +    R  + +EA+     M       DE 
Sbjct: 325 ----FNSMWE------EHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEK---DER 371

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
            +S++L AC +   +   E+  + +++ + ++  H    L   Y K G WE   +    +
Sbjct: 372 LWSALLGACRIHSKMELAEKAANSLLELQPQNPGHY-VLLSNIYAKAGKWEKVAKFRDMM 430

Query: 483 T 483
           T
Sbjct: 431 T 431



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/189 (20%), Positives = 90/189 (47%), Gaps = 4/189 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK  ++ V++ C++   +   R  +  I +     D  +  ++++MYAKCG ++S   V 
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   ++ S + ++A Y  +     A   F  +    + PN  T+ ++L  C     I+
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319

Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           EG +    +M  ++  +  V +   ++ +  + G +++A  + E + V+++   W+A++ 
Sbjct: 320 EGLRFF-NSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378

Query: 293 GFKQHGDYE 301
             + H   E
Sbjct: 379 ACRIHSKME 387


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 194/640 (30%), Positives = 321/640 (50%), Gaps = 58/640 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY------------ 180
           L+ GRR    + K  V    ++   +V+ YAK GD K  + + K M              
Sbjct: 12  LKEGRRVFDTMEKKNV----YLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESAS 67

Query: 181 --------LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
                    D+ S N +++GY  N L ++    + ++  + +  +  T  ++L  C    
Sbjct: 68  ELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSG 127

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            +  GK +H+  +K  +  +   SN LL MY KCG ++ A  VFE + +RNV+SWT++I 
Sbjct: 128 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 187

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G+ + G  +  + L+  M ++G+  +    T  L +CA   +   G   H  +    MA 
Sbjct: 188 GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 247

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FV  A++DMY+  G +  A      M      +SWN  +                   
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTM-VVKDIISWNTMVG------------------ 288

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
              +   D  T + IL AC+ L +L   ++IH  I+++ + S+ HV ++L++ Y KCG  
Sbjct: 289 ---ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVL 345

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A  +F  + + D+VSW  MI  Y  +G   +AI  F +M   GI P   +F+++L AC
Sbjct: 346 GLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYAC 405

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SHSGL++ G + F  M  ++ I P+  HY+CMVDLL R G L  A  FI  LPI P A I
Sbjct: 406 SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATI 465

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L   CR + D+++AE +++++ EL+P++   YV L+N+YAEA    + +  R+ +  
Sbjct: 466 WGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGK 525

Query: 653 KEISKEPGCSWIEVYNKIYRFFS-QNKSHSEMPKVYEKLKQLMQQIEDIGH--------- 702
           K + K PGCSWIE+  ++  F S  N SH    K+   LK++ +++++ G+         
Sbjct: 526 KGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALI 585

Query: 703 --TDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              + +KE  +  HSE+LA+ FGL++LP +     ++ L 
Sbjct: 586 NADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLR 625



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 161/657 (24%), Positives = 268/657 (40%), Gaps = 114/657 (17%)

Query: 20  YPVVEQVKPKKCNHRKTVEVK-EPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKG 78
           Y  +   K   C  +  VE   E   S SA +LF+K   R  +S + +I +GY++    G
Sbjct: 37  YAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSMI-SGYVS---NG 92

Query: 79  ISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRR 138
           ++  G          G ID                 +D   +I VL  C++   L LG+ 
Sbjct: 93  LTERGLGIYKQMMYLG-ID-----------------VDLATIISVLVGCAKSGTLSLGKA 134

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            H+L  K++       + +L++MY+KCGD+   + V ++M   ++ S   ++AGY ++  
Sbjct: 135 VHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGW 194

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            D A     +++   V+ +    +++L  C    ++D GK +H         S   V NA
Sbjct: 195 SDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNA 254

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           L+ MY KCG ME A SVF  +V +++ISW  ++   K                     P+
Sbjct: 255 LMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELK---------------------PD 293

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
             T    L +CASL     G   H  +++ G +    V  A+VD+Y   G +  A + L 
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA-RLLF 352

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M  S   VSW   IAG+  +    EAI  F++M       DE ++ SIL ACS    L 
Sbjct: 353 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 412

Query: 439 TCEQIHSRIVKSKF--ESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIK 495
              +    I+K+ F  E  +   + +++  ++ G+   A +    L  A D   W +++ 
Sbjct: 413 QGWRFFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLC 471

Query: 496 AYSQNGRARKAIILFEKMV--VEGIRPTNSTFLAVLS----------------------- 530
                 R    I L EK+   V  + P N+ +  +L+                       
Sbjct: 472 GC----RIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKG 527

Query: 531 -----ACS--------------------HSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
                 CS                    HS  ++   K     +KE G  P+  +     
Sbjct: 528 LRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINA 587

Query: 566 D-------LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           D       L G + KL +A   ++ LP + T  + + L     CH   +MA+F+SK+
Sbjct: 588 DEMQKEMALCGHSEKLAMAFGLLT-LPPRKTIRVTKNLRVCGDCH---EMAKFMSKE 640



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 180/430 (41%), Gaps = 80/430 (18%)

Query: 259 LLTMYIKCGMMEDAESVF---------------------------------------EG- 278
           L++ Y  CG +++   VF                                       EG 
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 279 -----------LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
                      L  R+VISW ++I+G+  +G  E+ L +   M   GID +  T    L 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
            CA      +G   H+  IK            ++DMYS  G++  A +  ++MG+  + V
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER-NVV 180

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           SW + IAG+ R+  ++ AI    QM +     D    +SIL AC+   SL   + +H  I
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240

Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
             +   SN+ V ++L++ Y KCGS E A  VFS +   D++SWN+M+             
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE----------- 289

Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
                     ++P + T   +L AC+    ++ G+++   +++  G   +    + +VDL
Sbjct: 290 ----------LKPDSRTMACILPACASLSALERGKEIHGYILRN-GYSSDRHVANALVDL 338

Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILELDPDDAA 625
             + G L +A +    +P K     W  + A    H   +  +A F   +   ++PD+ +
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVS-WTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 397

Query: 626 VYVTLSNMYA 635
               +S +YA
Sbjct: 398 F---ISILYA 404


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 172/509 (33%), Positives = 287/509 (56%), Gaps = 15/509 (2%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           ++EG+++H++     +   T   N L++MY KCG +++A ++F G+++R V+SW+A+I  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 294 FKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG--M 350
           +  HG  ++ L L   MR DG ++PN  TFT    +C  + +   G   HA  +  G   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           +    +  A+++MY   G + EA+K    M     + SW + I     N +  EA+E F 
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTM-DHPDAFSWTSMITACTENCELLEALELFH 179

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +M          T +S+L AC+   +L   +QIHSR+  S F S+V   ++L++ Y KCG
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S E + +VF+ +   + VSW +MI A +Q+G+  +A+ LF++M +EG+    +TF+ VL 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSH+GL+++  + F SMV++Y I P E HY   +D +GRAG+L+ A   I ++P  P  
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
             W+ L  ACR HS  + A  +++ + +L P+D+  Y  L N+YA  G   D    RK M
Sbjct: 360 LTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN----- 705
             + + K PG S+IEV NK++ F + +++H    ++  +L++L  ++ + G+  N     
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479

Query: 706 ------EKEDRVLYHSERLAVGFGLISLP 728
                 EKE  +  HSE+LA+ FGLI+ P
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATP 508



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 194/408 (47%), Gaps = 41/408 (10%)

Query: 133 LELGRRYHALITKTAVCGDQFVTAS---LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCL 189
           +E GRR H   ++ ++CG    T +   LV+MYAKCG +    A+   +    + S + +
Sbjct: 1   MEEGRRIH---SRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAM 57

Query: 190 LAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
           +  YA +    +A   F ++  DG  V+PN  T++ +   CG +  +++G+++HA  M  
Sbjct: 58  IGAYALHGRGQEALLLFHRMRNDG-RVEPNAMTFTGVFNACGVIEDLEQGREIHALAMAS 116

Query: 248 QYL--SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
             L  S   + NALL MY++CG +E+A  VF+ +   +  SWT++I    ++ +  + L 
Sbjct: 117 GELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALE 176

Query: 306 LVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
           L   M  +GI P   T    L +CA      +G   H+++   G        TA++DMY+
Sbjct: 177 LFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYA 236

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G +  + K    M ++ +SVSW A IA   ++ + +EA+E F +M       D  T+ 
Sbjct: 237 KCGSLECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFI 295

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFE-------------SNVHVGSSLIEAYNKCGSW 472
            +L+ACS           H+ ++K   E             +  H   +L +   + G  
Sbjct: 296 CVLRACS-----------HAGLIKESLEFFHSMVEDYAIAPTETHYCRAL-DTIGRAGRL 343

Query: 473 EDAERVFSQLT-AADVVSWNSMIKA---YSQNGRARKAIILFEKMVVE 516
           +DAE +   +    + ++W +++ A   +SQ  RA K   L  K+  E
Sbjct: 344 QDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPE 391



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 14/311 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTA--VCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           V + C   E LE GR  HAL   +      +  +  +L+NMY +CG ++    V   M +
Sbjct: 93  VFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDH 152

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S   ++    +N    +A   F +++   + P   T +++L  C    A+  GKQ+
Sbjct: 153 PDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQI 212

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H++     + S      ALL MY KCG +E +  VF  +  RN +SWTA+I    QHG  
Sbjct: 213 HSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQG 272

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM------FHAQVIKRGMALGD 354
           ++ L L   M  +G+  +  TF   L +C     SH G +      FH+ V    +A  +
Sbjct: 273 DEALELFKEMNLEGMVADATTFICVLRAC-----SHAGLIKESLEFFHSMVEDYAIAPTE 327

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
                 +D     G + +A++ +  M     +++W   +     + + E A +  ++++ 
Sbjct: 328 THYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLLNACRIHSQAERATK-VAELLS 386

Query: 415 NDAACDEFTYS 425
             A  D   Y+
Sbjct: 387 KLAPEDSMAYT 397


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 197/675 (29%), Positives = 337/675 (49%), Gaps = 72/675 (10%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-- 181
           L  C        G  +H LI       + FV  +LV MY++ G ++    V  ++     
Sbjct: 156 LKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGI 215

Query: 182 -DIASCNCLLAGYAKNALFDQAFSFFLKLDGI------DVQPNHYTYSTMLAICGSLSAI 234
            D+ S N ++A + K +    A   F ++  I      + + +  +   +L  C SL A+
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
            + K++H+  ++    +   V NAL+  Y KCG M+DA +VF  +  ++V+SW A++ G+
Sbjct: 276 PQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGY 335

Query: 295 KQHGDYEKPLRLVCLMREDGI-----------------------------------DPNE 319
            Q G +     L   MR++ I                                   +PN 
Sbjct: 336 TQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNS 395

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGM------------ALGDFVGTAIVDMYSGL 367
            T    L++CASL     G   HA  +K+ +                 V  A++DMYS  
Sbjct: 396 VTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKC 455

Query: 368 GEIWEAKKQLKEMGKSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTY 424
                A+     + +   +V +W   I G+ +   + +A++ FS+M+    A   + +T 
Sbjct: 456 RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTI 515

Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGSSLIEAYNKCGSWEDAERVFSQL 482
           S IL AC+ L SL   +QIH+ + +  ++ES+V+ V + LI+ Y+KCG  + A  VF  +
Sbjct: 516 SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSM 575

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              + VSW SM+  Y  +GR ++A+ +F+KM   G  P + +FL +L ACSHSG+V  G 
Sbjct: 576 PKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGL 635

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F+ M  +YG++    HY+C++DLL R+G+L+ A   I  +P++P+A IW  L +ACR 
Sbjct: 636 DYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRV 695

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           HS++++AE+   +++ +  ++   Y  +SN+YA A    D    R+LMK   I K PGCS
Sbjct: 696 HSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCS 755

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           W++       FF  ++SH   P++Y  L++L+ +I+ +G+            D EK + +
Sbjct: 756 WVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLL 815

Query: 712 LYHSERLAVGFGLIS 726
             HSE+LA+ +GL++
Sbjct: 816 TEHSEKLALAYGLLT 830



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 180/374 (48%), Gaps = 34/374 (9%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL--------------------QYL 250
           G DV P H+  +++L  C S++ +   +Q+H + +                       Y+
Sbjct: 26  GRDVSPTHF--ASLLKECRSVNTV---RQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYV 80

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S  ++   ++  Y+ CG   DA SV E +V    + W  ++    + G  ++ + + C M
Sbjct: 81  SPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRM 140

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
              G  P+ +T   AL +C  L +   G  FH  +   G     FV  A+V MYS  G +
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSL 200

Query: 371 WEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQM--VRNDAACDE----F 422
            +A     E+ +      +SWN+ +A   +      A++ FS+M  + ++ A +E     
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDII 260

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +  +IL AC+ L +L   ++IHS  +++   ++  V ++LI+ Y KCGS +DA  VF+ +
Sbjct: 261 SIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVM 320

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN+M+  Y+Q+G+   A  LF+ M  E I     T+ AV++  +  G  Q+  
Sbjct: 321 EFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEAL 380

Query: 543 KVFESMVKEYGILP 556
             F+ M+  YG  P
Sbjct: 381 DTFQQMIL-YGSEP 393



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 206/466 (44%), Gaps = 87/466 (18%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+  + L   +  H+   +     D FV  +L++ YAKCG +K  V V   M 
Sbjct: 262 IVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVME 321

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGI-------------------- 212
           + D+ S N ++ GY ++  F  AF  F       + LD I                    
Sbjct: 322 FKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALD 381

Query: 213 --------DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS------------K 252
                     +PN  T  ++L+ C SL A+ +G + HA ++K   LS             
Sbjct: 382 TFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGED 441

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
             V NAL+ MY KC   + A ++F  +   +RNV++WT +I G+ Q+GD    L+L   M
Sbjct: 442 LVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEM 501

Query: 311 --REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSG 366
             +   + PN YT +  L +CA L +  MG   HA V +         FV   ++DMYS 
Sbjct: 502 ISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSK 561

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G++  A+     M K  + VSW + ++G+  + + +EA++ F +M +     D+ ++  
Sbjct: 562 CGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLV 620

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L ACS           HS +V    +                  + D  R    + A+ 
Sbjct: 621 LLYACS-----------HSGMVDQGLD------------------YFDIMRSDYGVIAS- 650

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
              +  +I   +++GR  KA    ++M +E   P+ + ++A+LSAC
Sbjct: 651 AQHYACVIDLLARSGRLDKAWKTIQEMPME---PSAAIWVALLSAC 693



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/537 (22%), Positives = 230/537 (42%), Gaps = 67/537 (12%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V  Y  CG     ++V++++        N L+  + +    D+A     ++     +P+
Sbjct: 89  VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H+T    L  CG L +   G   H       + S   V NAL+ MY + G +EDA  VF+
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208

Query: 278 GLVQR---NVISWTAIINGFKQHGDYEKPLRL----VCLMREDGIDPNEYTFTVA--LAS 328
            + ++   +VISW +I+    +  +    L L      ++ E   +      ++   L +
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI-----------------W 371
           CASL+        H+  I+ G     FV  A++D Y+  G +                 W
Sbjct: 269 CASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSW 328

Query: 372 EAK-----------------KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            A                  K +++       ++W+A IAG+ +    +EA++ F QM+ 
Sbjct: 329 NAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL 388

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES------------NVHVGSSL 462
             +  +  T  S+L AC+ L +L+   + H+  +K    S            ++ V ++L
Sbjct: 389 YGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNAL 448

Query: 463 IEAYNKCGSWEDAERVFSQLT--AADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--GI 518
           I+ Y+KC S++ A  +F+ +     +VV+W  MI  Y+Q G +  A+ LF +M+ +   +
Sbjct: 449 IDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAV 508

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLE 575
            P   T   +L AC+H   ++ G+++   + + +    E + Y   +C++D+  + G ++
Sbjct: 509 APNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEY--ESSVYFVANCLIDMYSKCGDVD 566

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTL 630
            A     ++P K     W  + +    H   K A   F   Q     PDD +  V L
Sbjct: 567 TARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 41/331 (12%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCG------------DQFVTASLVNMYAKCGD 167
           +I +LS C+    L  G   HA   K  +              D  V  +L++MY+KC  
Sbjct: 398 IISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRS 457

Query: 168 IKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYST 223
            K+   +   +P    ++ +   ++ GYA+    + A   F ++      V PN YT S 
Sbjct: 458 FKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISC 517

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +L  C  LS++  GKQ+HA   +      +   V+N L+ MY KCG ++ A +VF+ + +
Sbjct: 518 ILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPK 577

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           RN +SWT++++G+  HG  ++ L +   M++ G  P++ +F V L +C+           
Sbjct: 578 RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACS----------- 626

Query: 342 HAQVIKRGMALGDFVGT------------AIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
           H+ ++ +G+   D + +             ++D+ +  G + +A K ++EM    S+  W
Sbjct: 627 HSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIW 686

Query: 390 NAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
            A ++    +   E A  A +++V   A  D
Sbjct: 687 VALLSACRVHSNVELAEYALNKLVSMKAEND 717


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/620 (31%), Positives = 334/620 (53%), Gaps = 24/620 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   + L  GR  H ++ K+ +  +  V  SL++MY++ G  +    V  +M   D
Sbjct: 267 LLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERD 326

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++A +  N  + +A    +++       N+ T++T L+ C +L  +   K +HA
Sbjct: 327 LISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHA 383

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             + L       + NAL+TMY K G M  A+ V + +  R+ ++W A+I G   H D ++
Sbjct: 384 FVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG---HADNKE 440

Query: 303 P---LRLVCLMREDGIDPNEYTFTVALASCASLRN--SHMGYMFHAQVIKRGMALGDFVG 357
           P   +    L+RE+G+  N  T    L++  S  +   H G   HA ++  G  L  FV 
Sbjct: 441 PNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDH-GMPIHAHIVVAGFELETFVQ 499

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           ++++ MY+  G++      + ++  + +S +WNA ++        EEA++   +M  +  
Sbjct: 500 SSLITMYAQCGDL-NTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGI 558

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D+F++S        L  L   +Q+HS I+K  FESN +V ++ ++ Y KCG  +D  R
Sbjct: 559 HLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFR 618

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           +  Q  +    SWN +I A +++G  ++A   F +M+  G+RP + TF+++LSACSH GL
Sbjct: 619 ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGL 678

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G   F SM  ++G+     H  C++DLLGRAGKL  A  FI+ +P+ PT  +WR L 
Sbjct: 679 VDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLL 738

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           AAC+ H +L++A   + ++ ELD  D + YV  SN+ A      D E  RK M+   I K
Sbjct: 739 AACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKK 798

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEK 707
           +P CSW+++ N++  F   ++ H +  ++Y KL++L + I + G+          TD E+
Sbjct: 799 KPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDTDEEQ 858

Query: 708 EDRVLY-HSERLAVGFGLIS 726
           ++  L+ HSER+A+ FGLI+
Sbjct: 859 KEHNLWNHSERIALAFGLIN 878



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 215/448 (47%), Gaps = 10/448 (2%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY+K G I+    V  +MP  + AS N L++G+ +   + +A  FF  +    V+P+ Y 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 221 YSTMLAICGSLSAIDEGK-QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
            ++++  C     + EG  Q+HA  +K        V  +LL  Y   G + + + VF+ +
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
            + N++SWT+++ G+  +G  ++ + +   +R DG+  NE      + SC  L +  +GY
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
                VIK G+     V  +++ M+     I EA     +M K   ++SWN+ I     N
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDM-KERDTISWNSIITASVHN 239

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
              E+++E FSQM    A  D  T S++L  C    +L     +H  +VKS  ESNV V 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +SL+  Y++ G  EDAE VF ++   D++SWNSM+ ++  NG   +A+ L  +M+     
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               TF   LSAC +     +  K+  + V   G+       + +V + G+ G +  A  
Sbjct: 360 TNYVTFTTALSACYN----LETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQR 415

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLK 607
               +P +     W  L      H+D K
Sbjct: 416 VCKIMPDRDEVT-WNALIGG---HADNK 439



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 249/554 (44%), Gaps = 30/554 (5%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
           A  +F+K P+R   S ++L+          G  R G+  +   F    ++ G    V  +
Sbjct: 11  AQHVFDKMPERNEASWNNLM---------SGFVRVGWYQKAMQFFCHMLEHG----VRPS 57

Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGR-RYHALITKTAVCGDQFVTASLVNMYAKCG 166
            Y   SL+         + C R  C+  G  + HA + K  +  D FV  SL++ Y   G
Sbjct: 58  SYVAASLV---------TACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFG 108

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
            +  +  V K++   +I S   L+ GYA N    +  S + +L    V  N    +T++ 
Sbjct: 109 WVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIR 168

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
            CG L     G Q+    +K    +  +V+N+L++M+  C  +E+A  VF+ + +R+ IS
Sbjct: 169 SCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTIS 228

Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
           W +II     +G  EK L     MR      +  T +  L  C S +N   G   H  V+
Sbjct: 229 WNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVV 288

Query: 347 KRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           K G+     V  +++ MYS  G+  +A+    +M +    +SWN+ +A    N     A+
Sbjct: 289 KSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM-RERDLISWNSMMASHVDNGNYPRAL 347

Query: 407 EAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
           E   +M++   A +  T+++ L AC    +L T + +H+ ++      N+ +G++L+  Y
Sbjct: 348 ELLIEMLQTRKATNYVTFTTALSACY---NLETLKIVHAFVILLGLHHNLIIGNALVTMY 404

Query: 467 NKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
            K GS   A+RV   +   D V+WN++I  ++ N     AI  F  +  EG+     T +
Sbjct: 405 GKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIV 464

Query: 527 AVLSA-CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
            +LSA  S   L+  G  +   +V   G   E    S ++ +  + G L  +  +I ++ 
Sbjct: 465 NLLSAFLSPDDLLDHGMPIHAHIVVA-GFELETFVQSSLITMYAQCGDLNTS-NYIFDVL 522

Query: 586 IKPTAPIWRPLFAA 599
               +  W  + +A
Sbjct: 523 ANKNSSTWNAILSA 536


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 200/625 (32%), Positives = 318/625 (50%), Gaps = 24/625 (3%)

Query: 135 LGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           LGR  HA I +T       F+   LVNMY+K     S   V+       + +   L++G 
Sbjct: 25  LGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGC 84

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
             N  F  A   F  +    V PN +T+  +     SL     GKQLHA  +K   +   
Sbjct: 85  VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL----RLVCL 309
            V  +   MY K G+  +A ++F+ +  RN+ +W A ++   Q G     +    + +C+
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
              DG +PN  TF   L +CA + +  +G   H  +++        V   ++D Y   G+
Sbjct: 205 ---DG-EPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGD 260

Query: 370 IWEAKKQLKEMGKSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           I  ++     +G    +V SW + +A   +N + E A   F Q  R +    +F  SS+L
Sbjct: 261 IVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQ-ARKEVEPTDFMISSVL 319

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC+ L  L     +H+  +K+  E N+ VGS+L++ Y KCGS E AE+VF ++   ++V
Sbjct: 320 SACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLV 379

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVE--GIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
           +WN+MI  Y+  G    A+ LF++M     GI  +  T ++VLSACS +G V+ G ++FE
Sbjct: 380 TWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFE 439

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           SM   YGI P   HY+C+VDLLGR+G ++ A  FI  +PI PT  +W  L  AC+ H   
Sbjct: 440 SMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKT 499

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           K+ +  ++++ ELDPDD+  +V  SNM A AG   +A   RK M+   I K  G SW+ V
Sbjct: 500 KLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAV 559

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHS 715
            N+++ F +++  H +  ++   L +L  +++  G+            + EK   V YHS
Sbjct: 560 KNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHS 619

Query: 716 ERLAVGFGLISLPAKNKFECSRTLE 740
           E++A+ FGLI+LP       ++ L 
Sbjct: 620 EKIALAFGLITLPRGVPIRITKNLR 644



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 6/285 (2%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM--PYL 181
           L+ C+    LELGR+ H  I ++    D  V   L++ Y KCGDI S   V  ++     
Sbjct: 217 LNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRR 276

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   LLA   +N   ++A   FL+    +V+P  +  S++L+ C  L  ++ G+ +H
Sbjct: 277 NVVSWCSLLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRSVH 335

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           A  +K        V +AL+ +Y KCG +E AE VF  + +RN+++W A+I G+   GD +
Sbjct: 336 ALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVD 395

Query: 302 KPLRLVCLMRED--GIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGT 358
             L L   M     GI  +  T    L++C+       G  +F +   + G+  G     
Sbjct: 396 MALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYA 455

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +VD+    G +  A + +K M    +   W A +     + KT+
Sbjct: 456 CVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK 500



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 6/181 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    LELGR  HAL  K  V  + FV ++LV++Y KCG I+    V ++MP  +
Sbjct: 318 VLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERN 377

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + + N ++ GYA     D A S F ++      +  ++ T  ++L+ C    A++ G Q+
Sbjct: 378 LVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQI 437

Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQH 297
             ++M+ +Y  +    +   ++ +  + G+++ A    + +     IS W A++   K H
Sbjct: 438 F-ESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMH 496

Query: 298 G 298
           G
Sbjct: 497 G 497


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 184/549 (33%), Positives = 294/549 (53%), Gaps = 7/549 (1%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVAVVKQ 177
           F   +L  C++      G ++H+   K+ +  D+FV  SL+ +Y K G ++     V   
Sbjct: 62  FYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDG 121

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           + Y D+ S   ++ GY K     ++   FL++ G+ ++PN +T S ++  C  L  +  G
Sbjct: 122 LFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLG 181

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           K  H   M   +     +S AL+ MY +   ++DA  VF  L Q + I WT+II+ F ++
Sbjct: 182 KCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRN 241

Query: 298 GDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
             Y+K L     M R+ G+ P+ +TF   L +C +L     G   HA+VI  G++   FV
Sbjct: 242 DVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFV 301

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            +++VDMY     + +++     M    + VSW A + G+ +N   E  I  F    R  
Sbjct: 302 ESSLVDMYGKCRLVNQSQCVFDRM-SVKNLVSWTALLGGYCQNGDFESVIRIF----REG 356

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D +++ ++L+AC+ L ++   +++H + VK     +V   S+L++ Y KCG  + A 
Sbjct: 357 KKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAY 416

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           R+F +++  ++++WNSMI  ++QNGR  +   LF++M+ EGIRP   +F+ VL ACSH+G
Sbjct: 417 RIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAG 476

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV  G+K F +M + Y I P   HY+CM+DLLGRAG LE A   I N   +    +W  L
Sbjct: 477 LVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVL 536

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
             AC        AE I+K+ +EL PD    YV L+N+Y   G   DA + R LM  + + 
Sbjct: 537 LGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVG 596

Query: 657 KEPGCSWIE 665
           K PG SWIE
Sbjct: 597 KMPGTSWIE 605



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 199/395 (50%), Gaps = 15/395 (3%)

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y K+    +A      +D   +    + Y+++L  C    +   G Q H+  +K    + 
Sbjct: 35  YCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTD 94

Query: 253 TAVSNALLTMYIKCG-MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             V N+LL +Y K G  + +A  VF+GL  +++ISWT++I G+ +    +K L L   M 
Sbjct: 95  RFVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEML 154

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
             GI+PN +T +  + +C+ L +  +G  FH  V+ RG  L D + TA++DMY     + 
Sbjct: 155 GLGIEPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVD 214

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKA 430
           +A     E+     ++ W + I+ F RN   ++A+  F  M R    + D FT+ ++L A
Sbjct: 215 DAILVFVEL-PQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTA 273

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C  L  L   +++H++++ S    NV V SSL++ Y KC     ++ VF +++  ++VSW
Sbjct: 274 CGNLGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSW 333

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            +++  Y QNG     I +F     EG +    +F  VL AC+    V+ G++V    VK
Sbjct: 334 TALLGGYCQNGDFESVIRIFR----EGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVK 389

Query: 551 E---YGILPEEAHYSCMVDLLGRAGKLEIAL-IFI 581
                 ++ E A    +VDL  + G ++ A  IF+
Sbjct: 390 RCCWRDVVTESA----LVDLYAKCGCIDFAYRIFV 420



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 3/197 (1%)

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           EAI   + +     +   F Y+S+L+ C+   S     Q HS  +KS  +++  VG+SL+
Sbjct: 43  EAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLL 102

Query: 464 EAYNKCG-SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
             Y K G +  +A RVF  L   D++SW SMI  Y +  + +K++ LF +M+  GI P  
Sbjct: 103 ALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNG 162

Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFIS 582
            T  AV+ ACS  G ++ G K F  +V   G    +   + ++D+ GR   ++ A++   
Sbjct: 163 FTLSAVIKACSGLGDLRLG-KCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFV 221

Query: 583 NLPIKPTAPIWRPLFAA 599
            LP +P A  W  + +A
Sbjct: 222 ELP-QPDAICWTSIISA 237


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/601 (30%), Positives = 310/601 (51%), Gaps = 45/601 (7%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  H+ I    +  +  +   L+  YA   D+ S   V  ++P  ++   N ++  Y  N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             + +    F  + G +V+P+HYT+  +L  C     I  G+++H    K+   S   V 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L++MY KCG + +A  V + + +R+V+SW +++ G+ Q+  ++  L +   M    I 
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            +  T    L + ++    ++ Y                    + DM+  +G     KK 
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMY--------------------VKDMFFKMG-----KKS 273

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L         VSWN  I  + +N    EA+E +S+M  +    D  + +S+L AC    +
Sbjct: 274 L---------VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L+  ++IH  I + K   N+ + ++LI+ Y KCG  E A  VF  + + DVVSW +MI A
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +GR   A+ LF K+   G+ P +  F+  L+ACSH+GL+++G+  F+ M   Y I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              H +CMVDLLGRAGK++ A  FI ++ ++P   +W  L  ACR HSD  +    + ++
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            +L P+ +  YV LSN+YA+AG   +    R +MK K + K PG S +EV   I+ F   
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---VLYHSERLAVGFGLI 725
           ++SH +  ++Y +L  L+++++++G+         D E+ED+   +  HSE+LA+ F L+
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624

Query: 726 S 726
           +
Sbjct: 625 N 625



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 34/310 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    + +GR+ H   TK  +    FV   LV+MY KCG +     V+ +M   D
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+ GYA+N  FD A     +++ + +  +  T +++L                 
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA--------------- 250

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                  +S T   N    MY+K         +F  + +++++SW  +I  + ++    +
Sbjct: 251 -------VSNTTTEN---VMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   M  DG +P+  + T  L +C       +G   H  + ++ +     +  A++D
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A+   + M KS   VSW A I+ +  + +  +A+  FS++  +    D  
Sbjct: 353 MYAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 423 TYSSILKACS 432
            + + L ACS
Sbjct: 412 AFVTTLAACS 421



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 2/165 (1%)

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
           P + T   +HSRI+      N  +G  L+ AY        A +VF ++   +V+  N MI
Sbjct: 53  PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           ++Y  NG   + + +F  M    +RP + TF  VL ACS SG +  G+K+  S  K  G+
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGL 171

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
                  + +V + G+ G L  A + +  +  +     W  L   
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSLVVG 215



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 21/215 (9%)

Query: 102 NTVPVTCYSLESLL-------DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           N +PV    L S +       D   +  VL  C     L LG++ H  I +  +  +  +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
             +L++MYAKCG ++    V + M   D+ S   +++ Y  +     A + F KL    +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQL-------HAQTMKLQYLSKTAVSNALLTMYIKCG 267
            P+   + T LA C     ++EG+         +  T +L++L+       ++ +  + G
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA------CMVDLLGRAG 460

Query: 268 MMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
            +++A    + + ++ N   W A++   + H D +
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/545 (32%), Positives = 297/545 (54%), Gaps = 14/545 (2%)

Query: 208 KLDGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
           K+D     P NHY Y+++L  C S  A++ GKQLHA+  +L       ++  L+  Y  C
Sbjct: 47  KVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVC 106

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             + +A  +F+ + + N+  W  +I  +  +G +E  + L   M E G+ P+ +T    L
Sbjct: 107 NSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVL 166

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
            +C++L     G + H +VI+ G     FVG A+VDMY+  G + +A+    ++     +
Sbjct: 167 KACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKI-VDRDA 225

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V WN+ +A + +N   +E++    +M        E T  +++ + + +  L    +IH  
Sbjct: 226 VLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGF 285

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
             +  F+ N  V ++LI+ Y KCGS + A  +F +L    VVSWN++I  Y+ +G A +A
Sbjct: 286 GWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEA 345

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LFE+M+ E  +P + TF+  L+ACS   L+ +G+ ++  MV++  I P   HY+CMVD
Sbjct: 346 LDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVD 404

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
           LLG  G+L+ A   I  + + P + +W  L  +C+ H ++++AE   ++++EL+PDD+  
Sbjct: 405 LLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGN 464

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKV 686
           YV L+NMYA++G        R+LM  K I K   CSWIEV NK+Y F S + SH     +
Sbjct: 465 YVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAI 524

Query: 687 YEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFEC 735
           Y +LK+L   + + G+            ++EK D V  HSERLA+ FGLIS     +   
Sbjct: 525 YAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLI 584

Query: 736 SRTLE 740
           ++ L 
Sbjct: 585 TKNLR 589



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 199/410 (48%), Gaps = 6/410 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C   + LE G++ HA + +  +  +  +   LVN Y+ C  +++   +  ++P  +
Sbjct: 64  LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGN 123

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +   N L+  YA N   + A S + ++    ++P+++T   +L  C +LS I EG+ +H 
Sbjct: 124 LFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHE 183

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           + ++  +     V  AL+ MY KCG + DA  VF+ +V R+ + W +++  + Q+G  ++
Sbjct: 184 RVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDE 243

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L L C M   G+ P E T    ++S A +     G   H    + G    D V TA++D
Sbjct: 244 SLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALID 303

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +    L E  +    VSWNA I G+  +    EA++ F +M++ +A  D  
Sbjct: 304 MYAKCGSV-KVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHI 361

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T+   L ACS    L     +++ +V+  +    V   + +++    CG  ++A  +  Q
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQ 421

Query: 482 L-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           +    D   W +++ +   +G    A +  EK++   + P +S    +L+
Sbjct: 422 MDVMPDSGVWGALLNSCKTHGNVELAEVALEKLI--ELEPDDSGNYVILA 469


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 290/569 (50%), Gaps = 44/569 (7%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN +  + +L  C  L  ++ G+++H   ++        + NA+L MY KCG    A   
Sbjct: 124 PNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRA 183

Query: 276 FEGLVQ-------------------------------RNVISWTAIINGFKQHGDYEKPL 304
           F  + Q                               R+V SW  I++G  +HG   + L
Sbjct: 184 FGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEAL 243

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
             +  M   G+  + YT+++  A    L +  +G   H +V+   +    FVG +++DMY
Sbjct: 244 GRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMY 303

Query: 365 SGLGEIWEAKKQLKEMGK--SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
              GE+  A                +W+  +AG+ +N + EEA+E F +M+R      +F
Sbjct: 304 CKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQF 363

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
             +S+  AC+    +    Q+H  + K     +  + S++++ Y+K GS EDA R+F   
Sbjct: 364 ILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSA 423

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              +V  W +M+ +Y+ +G+ R A+ +F +M  E I P   T +AVLSACSHSGLV DG 
Sbjct: 424 QTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGY 483

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M +EYGI+P   HY+CMVDL GRAG L+ A  FI    I   A +W+ L +ACR 
Sbjct: 484 HYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRL 543

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  ++ A+  S+++++L+  DA  YV +SNMYA      D  + R  MK + + K+PG S
Sbjct: 544 HKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQS 603

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR---V 711
           WI + N ++RF + + SH    ++Y  L++LM++++++G+T        D E+E R   +
Sbjct: 604 WIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSL 663

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            +HSE+LA+ FG+IS P        + L 
Sbjct: 664 KFHSEKLAIAFGIISTPVGTALRIFKNLR 692



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 233/566 (41%), Gaps = 96/566 (16%)

Query: 10  LINTSSFTFP-----YPVVEQVKPKKCNHRKTVEVKEPFAS------YSACQLFNKSPKR 58
           L++  +F F       P       KK  HR++V    P +S      ++A ++F+ +P R
Sbjct: 28  LLSPQTFIFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGLHNAHRVFDGTPTR 87

Query: 59  AGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFID--DGCSNTVPVTCYSLESLLD 116
           +  + + +I          G +R G   R+      F +  D C  T P           
Sbjct: 88  SLPAWTSII---------SGCAREG---RHADGMRAFAEMLDECGATAP----------- 124

Query: 117 KQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD-------- 167
             FV+  VL  C+    +E GRR H  I ++ VC D  +  ++++MYAKCGD        
Sbjct: 125 NAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAF 184

Query: 168 -----------------------IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFS 204
                                  +     +  +    D++S N +++G  ++    +A  
Sbjct: 185 GAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALG 244

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
              ++    V  ++YTYS + A+ G LS+ D G+QLH + +         V  +L+ MY 
Sbjct: 245 RLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYC 304

Query: 265 KCGMMEDAESVFE---GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           KCG ME A S+F+      +    +W+ ++ G+ Q+G  E+ L     M  +G+   ++ 
Sbjct: 305 KCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI 364

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            T   ++CA+      G   H  V K G      + +AIVDMYS  G + +A +  +   
Sbjct: 365 LTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRS-A 423

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           ++ +   W   +  +  + +   A+E FS+M       +E T  ++L ACS         
Sbjct: 424 QTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACS--------- 474

Query: 442 QIHSRIVKSKFE------------SNVHVGSSLIEAYNKCGSWEDAERVFSQ-LTAADVV 488
             HS +V   +              N    + +++ Y + G  + A+    +   + + V
Sbjct: 475 --HSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAV 532

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMV 514
            W +++ A   +     A +  EK+V
Sbjct: 533 VWKTLLSACRLHKHIEYAQLASEKLV 558



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 173/375 (46%), Gaps = 34/375 (9%)

Query: 48  ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGC--SNTVP 105
           A QLF++S  R  +S+ + I +G M        R+G++T         +  G   SN   
Sbjct: 211 ATQLFDESSLR-DVSSWNTIVSGLM--------RHGHTTEALGRLQQMVRAGVTFSNYTY 261

Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC 165
              ++L  LL  +               +LGR+ H  +    +  D FV  SL++MY KC
Sbjct: 262 SMVFALAGLLSSR---------------DLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKC 306

Query: 166 GDIKSMVAVVKQMPYLDIA-----SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           G+++S +++  +  + D       + + ++AGY +N   ++A  FF ++    V    + 
Sbjct: 307 GEMESALSIFDR--WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFI 364

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
            +++ + C +   +++G+Q+H    KL +     +++A++ MY K G +EDA  +F    
Sbjct: 365 LTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQ 424

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY- 339
            +NV  WT ++  +  HG     L +   M+ + I PNE T    L++C+       GY 
Sbjct: 425 TKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYH 484

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
            F+    + G+         +VD+Y   G + +AK  ++E   S  +V W   ++    +
Sbjct: 485 YFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLH 544

Query: 400 QKTEEAIEAFSQMVR 414
           +  E A  A  ++V+
Sbjct: 545 KHIEYAQLASEKLVQ 559



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 7/184 (3%)

Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHS 445
           +W + I+G  R  +  + + AF++M+    A   + F  + +L+ C+ L  + +  +IH 
Sbjct: 91  AWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHG 150

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
            I++S    +V + +++++ Y KCG    A R F  +   D  SWN +I+A  Q+G    
Sbjct: 151 WILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVG 210

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A  LF++  +  +   N+    ++S     G   +     + MV+  G+      YS + 
Sbjct: 211 ATQLFDESSLRDVSSWNT----IVSGLMRHGHTTEALGRLQQMVRA-GVTFSNYTYSMVF 265

Query: 566 DLLG 569
            L G
Sbjct: 266 ALAG 269


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/620 (31%), Positives = 323/620 (52%), Gaps = 51/620 (8%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           ++  Y +  ++     + ++MP  D+ S N +L+GYA+N   D A   F ++     + N
Sbjct: 127 MIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMP----EKN 182

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
             +++ +L+     S ++E   L         +S     N LL  ++K   + +A   F+
Sbjct: 183 DVSWNALLSAYVQNSKLEEACVLFGSRENWALVS----WNCLLGGFVKKKKIVEARQFFD 238

Query: 278 GLVQRNVISWTAIINGFKQHGDY--------EKPL----------------RLVCLMRE- 312
            +  R+V+SW  II G+ Q+G+         E P+                R+V   RE 
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEAREL 298

Query: 313 -DGI-DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            D + + NE ++   LA         M       +  R ++        ++  Y+  G+I
Sbjct: 299 FDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVS----TWNTMITGYAQCGKI 354

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
            EAK    +M K    VSW A IAG+ ++  + EA+  F  M R     +  ++SS L  
Sbjct: 355 SEAKNLFDKMPKR-DPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALST 413

Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
           C+ + +L   +Q+H R+VK  +E+   VG++L+  Y KCGS E+A  +F ++   D+VSW
Sbjct: 414 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 473

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           N+MI  YS++G   +A+  FE M  EG++P ++T +AVLSACSH+GLV  G++ F +M +
Sbjct: 474 NTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQ 533

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
           +YG+ P   HY+CMVDLLGRAG LE A   + N+P +P A IW  L  A R H + ++AE
Sbjct: 534 DYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 593

Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
             + +I  ++P+++ +YV LSN+YA +G   D  + R  M+ K + K PG SWIE+ NK 
Sbjct: 594 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 653

Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLA 719
           + F   ++ H E  +++  L+ L  +++  G+            + EKE  V YHSERLA
Sbjct: 654 HTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLA 713

Query: 720 VGFGLISLPAKNKFECSRTL 739
           V +G++ + +       + L
Sbjct: 714 VAYGIMRVSSGRPIRVIKNL 733



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 222/493 (45%), Gaps = 65/493 (13%)

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
           ++ Y + G     + V K+MP     S N +++GY +N  F+ A   F      D  P  
Sbjct: 66  ISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLF------DEMPER 119

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFE 277
              S  + I G +   + GK   A+ +  +   +   S N +L+ Y + G ++DA  VF+
Sbjct: 120 DLVSWNVMIKGYVRNRNLGK---ARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFD 176

Query: 278 GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM---REDGIDPNEYTFTVALASCASLRN 334
            + ++N +SW A+++ + Q+   E+     C++   RE+           AL S   L  
Sbjct: 177 RMPEKNDVSWNALLSAYVQNSKLEE----ACVLFGSREN----------WALVSWNCLLG 222

Query: 335 SHMGYMFHAQVIK-----RGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
              G++   ++++       M + D V    I+  Y+  GEI EA +QL +        +
Sbjct: 223 ---GFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEA-RQLFDESPVHDVFT 278

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
           W A ++G+ +N+  EEA E F +M  RN+ + +           ++L      E++   +
Sbjct: 279 WTAMVSGYIQNRMVEEARELFDRMPERNEVSWN-----------AMLAGYVQGERVE--M 325

Query: 448 VKSKFE----SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
            K  F+     NV   +++I  Y +CG   +A+ +F ++   D VSW +MI  YSQ+G +
Sbjct: 326 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 385

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK---EYGILPEEAH 560
            +A+ LF  M  EG R   S+F + LS C+    ++ G+++   +VK   E G     A 
Sbjct: 386 YEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA- 444

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH--SDLKMAEFISKQILE 618
              ++ +  + G +E A      +  K     W  + A    H   +  +  F S +   
Sbjct: 445 ---LLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRHGFGEEALRFFESMKREG 500

Query: 619 LDPDDAAVYVTLS 631
           L PDDA +   LS
Sbjct: 501 LKPDDATMVAVLS 513



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 2/189 (1%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L++      LS C+    LELG++ H  + K       FV  +L+ MY KCG I+    +
Sbjct: 402 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 461

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
            K+M   DI S N ++AGY+++   ++A  FF  +    ++P+  T   +L+ C     +
Sbjct: 462 FKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLV 521

Query: 235 DEGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
           D+G+Q  H  T        +     ++ +  + G++E+A ++ + +  + +   W  ++ 
Sbjct: 522 DKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLG 581

Query: 293 GFKQHGDYE 301
             + HG+ E
Sbjct: 582 ASRVHGNTE 590



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 160/350 (45%), Gaps = 41/350 (11%)

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N  ++ Y++ G   +A  VF+ + + + +S+ A+I+G+ ++G++E    L  ++ ++  +
Sbjct: 63  NVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFE----LARMLFDEMPE 118

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKK 375
            +  ++ V +     +RN ++G    A+ +   M   D      I+  Y+  G + +A++
Sbjct: 119 RDLVSWNVMIK--GYVRNRNLG---KARELFERMPERDVCSWNTILSGYAQNGCVDDARR 173

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT--YSSILKACSL 433
               M +  + VSWNA ++ + +N K EEA   F    R + A   +       +K   +
Sbjct: 174 VFDRMPEK-NDVSWNALLSAYVQNSKLEEACVLFGS--RENWALVSWNCLLGGFVKKKKI 230

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           + +    + +  R V S         +++I  Y + G  ++A ++F +    DV +W +M
Sbjct: 231 VEARQFFDSMKVRDVVS--------WNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAM 282

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE-Y 552
           +  Y QN    +A  LF++M        N+           +G VQ G++V   M KE +
Sbjct: 283 VSGYIQNRMVEEARELFDRMPERNEVSWNAML---------AGYVQ-GERV--EMAKELF 330

Query: 553 GILP--EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI-WRPLFAA 599
            ++P    + ++ M+    + GK+  A      +P +   P+ W  + A 
Sbjct: 331 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD--PVSWAAMIAG 378



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 27/123 (21%)

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
           +S++   +  I +Y + G   +A RVF ++     VS+N+MI  Y +NG    A +LF++
Sbjct: 56  DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115

Query: 513 M----------VVEG-IRPTN----------------STFLAVLSACSHSGLVQDGQKVF 545
           M          +++G +R  N                 ++  +LS  + +G V D ++VF
Sbjct: 116 MPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVF 175

Query: 546 ESM 548
           + M
Sbjct: 176 DRM 178


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 289/507 (57%), Gaps = 14/507 (2%)

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           I++   +HAQ ++  +     +   LL    KC  ++ A  +F+     NV  +TA+I+G
Sbjct: 52  INQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDG 111

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F   G+Y + ++L   M  + I P+ Y     L +C S      G   H++ +K G +  
Sbjct: 112 FVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSN 171

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGK---SASSVSWNAQIAGFFRNQKTEEAIEAFS 410
             V   I+++Y   GE+ +A++  +EM +   +  +V W A I GF RN++T  A+EAF 
Sbjct: 172 RLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFR 231

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
            M   +   +EFT   +L ACS L +L     +HS + K + E N+ VG++LI  Y++CG
Sbjct: 232 GMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCG 291

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           S ++A+ VF ++   DV+++N+MI   S NG++R+AI LF  MV   +RPTN TF+ VL+
Sbjct: 292 SIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLN 351

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSH GLV  G ++F SM ++Y + P+  HY CMVDLLGR G+LE A   I  + + P  
Sbjct: 352 ACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDH 411

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +   L +AC+ H +L++ E ++K++ +    D+  YV LS++YA +G   +A + R  M
Sbjct: 412 IMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKM 471

Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-------- 702
           K   + KEPGCS IEV N+I+ F   +  H +  ++YEKL++L + +   G+        
Sbjct: 472 KEAGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVL 531

Query: 703 ---TDNEKEDRVLYHSERLAVGFGLIS 726
               D EKE  +  HSERLA+ +GLIS
Sbjct: 532 QDIEDGEKEWALAMHSERLAICYGLIS 558



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 205/448 (45%), Gaps = 45/448 (10%)

Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           SN+ P    SL+SL  KQ    ++S   R   +      HA + +     D F+   L+ 
Sbjct: 27  SNSNP---KSLKSLDQKQ----IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLR 79

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
             +KC  I     + +     ++     L+ G+  +  + +A   + ++    + P++Y 
Sbjct: 80  SCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYL 139

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---- 276
            +++L  CGS  A+ EG+++H++ +KL + S   V   ++ +Y KCG + DA  VF    
Sbjct: 140 MASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMP 199

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           E +V ++ + WTA+I+GF ++ +  + L     M+ + + PNE+T    L++C+ L    
Sbjct: 200 EDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE 259

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H+ + K  + L  FVG A+++MYS  G I EA+    EM K    +++N  I+G 
Sbjct: 260 IGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM-KDRDVITYNTMISGL 318

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N K+ +AIE F  MV         T+  +L ACS           H  +V   FE   
Sbjct: 319 SMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACS-----------HGGLVDFGFE--- 364

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            +  S+   Y          RV  Q+       +  M+    + GR  +A  L   M   
Sbjct: 365 -IFHSMARDY----------RVEPQIE-----HYGCMVDLLGRVGRLEEAYDLIRTM--- 405

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            + P +     +LSAC     ++ G++V
Sbjct: 406 KMTPDHIMLGTLLSACKMHKNLELGEQV 433



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 178/401 (44%), Gaps = 44/401 (10%)

Query: 93  DGFIDDGCSNTVPVTCYSL---ESLL-DKQFVIEVLSYCSREECLELGRRYHALITKTAV 148
           DGF+  G +    +  YS    ES+L D   +  +L  C  +  L  GR  H+   K   
Sbjct: 110 DGFVSSG-NYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGF 168

Query: 149 CGDQFVTASLVNMYAKCGDIKSMVAVVKQMP----YLDIASCNCLLAGYAKNALFDQAFS 204
             ++ V   ++ +Y KCG++     V ++MP      D      ++ G+ +N   ++A  
Sbjct: 169 SSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALE 228

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
            F  + G +V+PN +T   +L+ C  L A++ G+ +H+   K +      V NAL+ MY 
Sbjct: 229 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 288

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           +CG +++A++VF+ +  R+VI++  +I+G   +G   + + L  +M    + P   TF  
Sbjct: 289 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVG 348

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +C     SH G             L DF      +++  +   +  + Q++  G   
Sbjct: 349 VLNAC-----SHGG-------------LVDFG----FEIFHSMARDYRVEPQIEHYG--- 383

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
                   +    R  + EEA +    M       D     ++L AC +  +L   EQ+ 
Sbjct: 384 ------CMVDLLGRVGRLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQV- 433

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           ++ ++ + +++      L   Y   G W++A +V +++  A
Sbjct: 434 AKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEA 474



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/284 (19%), Positives = 125/284 (44%), Gaps = 17/284 (5%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           KS  S+     I+   R++   + +   +Q++RN  + D F    +L++CS       C 
Sbjct: 32  KSLKSLDQKQIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCS------KCH 85

Query: 442 QIH--SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN----SMIK 495
            I   SRI +     NV++ ++LI+ +   G++ +A +++S++    ++  N    S++K
Sbjct: 86  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILK 145

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
           A       R+   +  + +  G        L ++      G + D ++VFE M ++  + 
Sbjct: 146 ACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV-VA 204

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLP---IKPTAPIWRPLFAACRCHSDLKMAEFI 612
            +   ++ M+D   R  +   AL     +    ++P       + +AC     L++  ++
Sbjct: 205 KDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWV 264

Query: 613 SKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
              + + + + +  V   L NMY+  G   +A+     MK +++
Sbjct: 265 HSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDV 308


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 177/578 (30%), Positives = 313/578 (54%), Gaps = 4/578 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
             LG++ H++I K     + +  ++L++MYAKC  ++        +   +  S N ++ G
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+    + AF     ++    + +  TY+ +L +       +   QLH + +K      
Sbjct: 175 YAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELV 234

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             + NAL+T Y KCG ++DA+ +F+     R++++W +++  +      +   +L+  M+
Sbjct: 235 NTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQ 294

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY--SGLGE 369
           E G +P+ Y++T  +++C +   S+ G   H  VIKRG      +  A++ MY  S  G 
Sbjct: 295 EHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGS 354

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + EA    + + +    VSWN+ + G  +   +E+A+++F  M       D +++S++L+
Sbjct: 355 MKEALCIFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLR 413

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +CS L +    +QIH   +K   ESN  V SSLI  Y+KCG  EDA R F + +    ++
Sbjct: 414 SCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSIT 473

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+++  Y+Q+G+   A+ LF  M  + ++  + TF+AVL+ACSH GLV+ G K    M 
Sbjct: 474 WNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCME 533

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            +YG+ P   HY+C VDL GR+G+LE A   I  +P KP   +W+    ACR   ++++A
Sbjct: 534 SDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELA 593

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             ++  +LE++P++   YV LSNMY       +  + ++LMK + + K PG SWIEV N 
Sbjct: 594 CQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNN 653

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           ++ F +Q+ SH    ++Y  L+ L+++I  +   D  K
Sbjct: 654 VHAFIAQDHSHPSCQQIYFLLEVLLEEITRMEDADGFK 691



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H+L  K     D +   +++N Y KC +++S   +  +MP  D  S N ++AG+      
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + ++     +     + + YT+ +ML           G+Q+H+  +K+ Y       +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG--IDP 317
           L MY KC  +EDA   F  + + N +SW A+ING+ Q GD E    L+  M ++G  +D 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             Y   + L   A   N  +    H ++IK G+ L + +  A++  YS  G + +AK+  
Sbjct: 201 GTYAPLLPLLDDADFCN--LTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
                    V+WN+ +A +    + + A +    M  +    D ++Y+SI+ AC      
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC--GSWEDAERVFSQLTAADVVSWNSMIK 495
                +H  ++K  FE +V + ++LI  Y K   GS ++A  +F  L   D VSWNS++ 
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQ G +  A+  F  M    +   + +F AVL +CS     Q GQ++   +  +YG+ 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYGLE 437

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
             E   S ++ +  + G +E A
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDA 459



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 13/275 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQMPY 180
           ++S C  E     GR  H L+ K        ++ +L++MY K   G +K  + + + + +
Sbjct: 308 IISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEF 367

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +L G ++    + A   FL +    +  +HY++S +L  C  L+    G+Q+
Sbjct: 368 KDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI 427

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K    S   VS++L+ MY KCG++EDA   FE   + + I+W A++ G+ QHG  
Sbjct: 428 HVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQC 487

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L L  LM    +  +  TF   L +C     SH+G +       R M     V   +
Sbjct: 488 NVALDLFFLMEXKKVKMDHITFVAVLTAC-----SHIGLVEQGCKFLRCMESDYGVPPRM 542

Query: 361 ------VDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                 VD+Y   G + EAK  ++EM     +  W
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVW 577



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 4/208 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS     +LG++ H L  K  +  ++FV++SL+ MY+KCG I+      ++     
Sbjct: 411 VLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNS 470

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-KQLH 241
             + N L+ GYA++   + A   F  ++   V+ +H T+  +L  C  +  +++G K L 
Sbjct: 471 SITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLR 530

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGDY 300
                     +       + +Y + G +E+A+++ E +  + +   W   +   +  G+ 
Sbjct: 531 CMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNI 590

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALAS 328
           E   ++   + E  ++P E+   V L++
Sbjct: 591 ELACQVAGHLLE--MEPEEHCTYVLLSN 616


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/667 (29%), Positives = 329/667 (49%), Gaps = 103/667 (15%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDI------------------KSMV--------- 172
           HA + K  +     +  SLV+MY KCG I                   SM+         
Sbjct: 165 HAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGP 224

Query: 173 ----AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                V  +MP  D  S N L++ +++     +  S F+++  +  +PN  TY ++L+ C
Sbjct: 225 YEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSAC 284

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            S+S +  G  LHA+ +++++     + + L+ MY KCG +  A  VF  L ++N +SWT
Sbjct: 285 ASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWT 344

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            +I+G  Q G  +  L L   MR+  +  +E+T    L  C+    +  G + H   IK 
Sbjct: 345 CLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKS 404

Query: 349 GMALGDFVGTAIVDMYSGLGEI-----------------WEA-------------KKQLK 378
           GM     VG AI+ MY+  G+                  W A              +Q  
Sbjct: 405 GMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCF 464

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M    + ++WN+ ++ + ++  +EE ++ +  M       D  T+++ ++AC+ L ++ 
Sbjct: 465 DMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIK 524

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              Q+ S + K    S+V V +S++  Y++CG  ++A +VF  +   +++SWN+M+ A++
Sbjct: 525 LGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFA 584

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           QNG   KAI  +E M+    +P + +++AVLS                            
Sbjct: 585 QNGLGNKAIETYEDMLRTECKPDHISYVAVLS---------------------------- 616

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
                  DLLGRAG L+ A   I  +P KP A +W  L  ACR H D  +AE  +K+++E
Sbjct: 617 -------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETAAKKLME 669

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+ +D+  YV L+N+YAE+G   +  + RKLMK+K I K PGCSWIEV N+++ F     
Sbjct: 670 LNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDET 729

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGH-----TDNEKEDRVLYHSERLAVGFGLISLPAKNKF 733
           SH ++ +VY KL+++M++IED G      +   +  +  YHSE+LA  FGL+SLP     
Sbjct: 730 SHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--YHSEKLAFAFGLLSLPPWMPI 787

Query: 734 ECSRTLE 740
           + ++ L 
Sbjct: 788 QVTKNLR 794



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 273/620 (44%), Gaps = 104/620 (16%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ----------------- 177
           + R+ HA +  + +    F+  +L++MY+ CG +     V ++                 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 178 --------------MPYL--DIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQP-N 217
                         MP++  D  S   +++GY +N L   +   F+ +      D+Q  +
Sbjct: 82  DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES--- 274
            ++Y+  +  CG L++     QLHA  +KL   ++T + N+L+ MYIKCG +  AE+   
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201

Query: 275 ----------------------------VFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
                                       VF  + +R+ +SW  +I+ F Q+G   + L  
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLST 261

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
              M   G  PN  T+   L++CAS+ +   G   HA++++   +L  F+G+ ++DMY+ 
Sbjct: 262 FVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAK 321

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  A++    +G+  + VSW   I+G  +    ++A+  F+QM +     DEFT ++
Sbjct: 322 CGCLALARRVFNSLGEQ-NQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLAT 380

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL  CS     AT E +H   +KS  +S V VG+++I  Y +CG  E A   F  +   D
Sbjct: 381 ILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRD 440

Query: 487 VVSWNSMIKAYSQNG---RARK----------------------------AIILFEKMVV 515
            +SW +MI A+SQNG   RAR+                             + L+  M  
Sbjct: 441 TISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRS 500

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + ++P   TF   + AC+    ++ G +V  S V ++G+  + +  + +V +  R G+++
Sbjct: 501 KAVKPDWVTFATSIRACADLATIKLGTQVV-SHVTKFGLSSDVSVANSIVTMYSRCGQIK 559

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNM 633
            A     ++ +K     W  + AA   +     A    + +L  E  PD  +    LS++
Sbjct: 560 EARKVFDSIHVKNLIS-WNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL 618

Query: 634 YAEAGLQADAEEQRKLMKMK 653
              AGL   A+     M  K
Sbjct: 619 LGRAGLLDQAKNLIDGMPFK 638



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 237/543 (43%), Gaps = 56/543 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    L+ G   HA I +     D F+ + L++MYAKCG +     V   +   +
Sbjct: 280 VLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQN 339

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S  CL++G A+  L D A + F ++    V  + +T +T+L +C   +    G+ LH 
Sbjct: 340 QVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHG 399

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY-- 300
             +K    S   V NA++TMY +CG  E A   F  +  R+ ISWTA+I  F Q+GD   
Sbjct: 400 YAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDR 459

Query: 301 -----------------------------EKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
                                        E+ ++L  LMR   + P+  TF  ++ +CA 
Sbjct: 460 ARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G    + V K G++    V  +IV MYS  G+I EA+K    +    + +SWNA
Sbjct: 520 LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSI-HVKNLISWNA 578

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +A F +N    +AIE +  M+R +   D  +Y ++L    LL      +Q  + I    
Sbjct: 579 MMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS--DLLGRAGLLDQAKNLIDGMP 636

Query: 452 FESNVHVGSSLIEA---YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           F+ N  V  +L+ A   ++     E A +   +L   D   +  +   Y+++G       
Sbjct: 637 FKPNATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVAD 696

Query: 509 LFEKMVVEGIRPT---------NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           + + M V+GIR +         N   +  +   SH  + +   K+ E M K    + +  
Sbjct: 697 MRKLMKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKK----IEDTG 752

Query: 560 HYSCMVDLLGRAGKL---EIALIFISNLPIKPTAPIW--RPLFAACRCHSDLKMAEFISK 614
            Y  +V    R+ K    ++A  F   L + P  PI   + L     CH  +K+   ++ 
Sbjct: 753 RYVSIVSCAHRSQKYHSEKLAFAF-GLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTS 811

Query: 615 QIL 617
           + L
Sbjct: 812 REL 814



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/501 (22%), Positives = 207/501 (41%), Gaps = 79/501 (15%)

Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF---------- 276
           +CGS       ++LHAQ +     +   + N LL MY  CGM++DA  VF          
Sbjct: 16  LCGSPPI---ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFT 72

Query: 277 -----------------EGL------VQRNVISWTAIINGFKQHGDYEKPLR-LVCLMRE 312
                            E L      + R+ +SWT +I+G+ Q+G     ++  + ++R+
Sbjct: 73  WNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRD 132

Query: 313 DGIDP---NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
              D    + +++T  + +C  L ++      HA VIK  +     +  ++VDMY   G 
Sbjct: 133 SNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGA 192

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC---------- 419
           I  A+     + +S S   WN+ I G+ +     EA+  F++M   D             
Sbjct: 193 ITLAETVFLNI-ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQ 251

Query: 420 ---------------------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
                                +  TY S+L AC+ +  L     +H+RI++ +   +  +
Sbjct: 252 YGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFL 311

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           GS LI+ Y KCG    A RVF+ L   + VSW  +I   +Q G    A+ LF +M    +
Sbjct: 312 GSGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASV 371

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
                T   +L  CS       G+ +    +K  G+       + ++ +  R G  E A 
Sbjct: 372 VLDEFTLATILGVCSGQNYAATGELLHGYAIKS-GMDSFVPVGNAIITMYARCGDTEKAS 430

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEA 637
           +   ++P++ T   W  +  A   + D+  A    +Q  ++ P+ +   + ++ + Y + 
Sbjct: 431 LAFRSMPLRDTIS-WTAMITAFSQNGDIDRA----RQCFDMMPERNVITWNSMLSTYIQH 485

Query: 638 GLQADAEEQRKLMKMKEISKE 658
           G   +  +   LM+ K +  +
Sbjct: 486 GFSEEGMKLYVLMRSKAVKPD 506



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 42/235 (17%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTA--SLVNMYAKCGDIKSM 171
           +LD+  +  +L  CS +     G   H    K+ +  D FV    +++ MYA+CGD +  
Sbjct: 372 VLDEFTLATILGVCSGQNYAATGELLHGYAIKSGM--DSFVPVGNAIITMYARCGDTEKA 429

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQA----------------------------- 202
               + MP  D  S   ++  +++N   D+A                             
Sbjct: 430 SLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSE 489

Query: 203 --FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
                ++ +    V+P+  T++T +  C  L+ I  G Q+ +   K    S  +V+N+++
Sbjct: 490 EGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIV 549

Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG-------DYEKPLRLVC 308
           TMY +CG +++A  VF+ +  +N+ISW A++  F Q+G        YE  LR  C
Sbjct: 550 TMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTEC 604


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 184/548 (33%), Positives = 301/548 (54%), Gaps = 8/548 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVAVVKQMPYL 181
           +L  C +      G ++HA + K+ +  D+ V  SL+++Y K G D++    V   M   
Sbjct: 66  LLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVK 125

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D  S   +++GY  +    +A   F+++    +QPN +T S+ +  C  L  +  G+  H
Sbjct: 126 DAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLGRCFH 185

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +   +     +S+ L  MY       DA  VF+ + + +VI WTA+++ F ++  YE
Sbjct: 186 GVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 245

Query: 302 KPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           + L L   M R  G+ P+  TF   L +C +LR    G   H ++I  G+     V +++
Sbjct: 246 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 305

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY   G + EA++    M +  + VSW+A + G+ +N + E+AIE F +M   D  C 
Sbjct: 306 LDMYGKSGSVREARQVFNGMPRK-NIVSWSALLGGYCQNGEHEKAIEMFREMEEKDLYC- 363

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
              + ++LKAC+ L ++   ++IH + V+     NV V S+LI+ Y K G  + A RV+S
Sbjct: 364 ---FGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYS 420

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
           +++  ++++WN+M+ A +QNGR  +A+  F  MV +GI+P   +F+AVL+AC H+GLV++
Sbjct: 421 KMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTGLVEE 480

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G+  F  M K YGI P   HYSCM+DLLGRAG  E A   +     +  A +W  L   C
Sbjct: 481 GRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVLLGPC 540

Query: 601 RCHSDL-KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
             ++D   +AE I+K+++EL+P     YV LSNMY   G   DA + RKLM  + ++K  
Sbjct: 541 AANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGVAKTV 600

Query: 660 GCSWIEVY 667
           G SWI+ +
Sbjct: 601 GQSWIDAH 608



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 3/303 (0%)

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G     +R++       I      +   L +C  + +   G  FHA V+K G+     VG
Sbjct: 39  GQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVG 98

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++ +Y  LG      +++ +      ++SW + ++G+  +++  +A+E F +MV    
Sbjct: 99  NSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGL 158

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++FT SS +KAC  L  +      H  ++   FE N  + S+L   Y       DA R
Sbjct: 159 QPNKFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARR 218

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSG 536
           VF ++   DV+ W +++ A+S+N    +A+ LF  M   +G+ P  STF  VL+AC +  
Sbjct: 219 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 278

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            ++ G+++   ++   GI       S ++D+ G++G +  A    + +P K     W  L
Sbjct: 279 RLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVS-WSAL 336

Query: 597 FAA 599
              
Sbjct: 337 LGG 339



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 2/172 (1%)

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
           S+S+ +  ++I    +  +  +AI   +    ++ +     Y+S+L+ C  + S     Q
Sbjct: 22  SSSAPTKQSRILELCKLGQLTDAIRILNSTHSSEISAKSNLYASLLQTCRKVFSFIHGLQ 81

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCG-SWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
            H+ +VKS  E++ +VG+SL+  Y K G    +  RVF  +   D +SW SM+  Y  + 
Sbjct: 82  FHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASK 141

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
              KA+ +F +MV  G++P   T  + + AC   G V+ G + F  +V  +G
Sbjct: 142 EHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRLG-RCFHGVVITHG 192


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/595 (32%), Positives = 314/595 (52%), Gaps = 60/595 (10%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA-KNALFDQAFSFFLKLDGIDVQP 216
           ++  + + GD+ S + V + M      + N +LAGY+ +      A   F ++     +P
Sbjct: 11  VITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIP----EP 66

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           + ++Y+ MLA C   +A  E  +L    M ++    TA  N +++ + + GMM+ A  +F
Sbjct: 67  DIFSYNIMLA-CYLHNADVESARLFFDQMPVK---DTASWNTMISGFSQNGMMDQARELF 122

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
             +  RN +SW A+I+G+ + GD               +D  +  F VA           
Sbjct: 123 LVMPVRNSVSWNAMISGYVESGD---------------LDLAKQLFEVAPVRSV------ 161

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                                TA++  +   G+I  A+K  +EM    + V+WNA IAG+
Sbjct: 162 ------------------VAWTAMITGFMKFGKIELAEKYFEEM-PMKNLVTWNAMIAGY 202

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
             N + E  ++ F +MV +    +  + SS+L  CS L +L   +Q+H  I KS    N+
Sbjct: 203 IENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNI 262

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
             G+SL+  Y KCG  EDA ++F  +   DVV+WN+MI  Y+Q+G   KA+ LF+KM  E
Sbjct: 263 TAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDE 322

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
           G++P   TF+AVLSAC+H+G V  G + F SMV++YG+  +  HY+C+VDLLGR GKL  
Sbjct: 323 GMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVE 382

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A+  I  +P KP + I+  L  ACR H +L++AEF +K +L LDP+ AA YV L+N+YA 
Sbjct: 383 AVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAA 442

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
                     R+ MK  ++ K PG SWIEV + ++ F S ++ H E+  ++EKL +L ++
Sbjct: 443 MNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERK 502

Query: 697 IEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +   G+            + +K+  +L HSE+LA+ +GLI +P        + L 
Sbjct: 503 MRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLR 557



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 150/310 (48%), Gaps = 17/310 (5%)

Query: 125 SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIA 184
            Y +R   +++ R+    I +     D F    ++  Y    D++S      QMP  D A
Sbjct: 45  GYSNRRGKIKVARQLFDRIPEP----DIFSYNIMLACYLHNADVESARLFFDQMPVKDTA 100

Query: 185 SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP--NHYTYSTMLAICGSLSAIDEGKQLHA 242
           S N +++G+++N + DQA   FL      V P  N  +++ M++       +D  KQL  
Sbjct: 101 SWNTMISGFSQNGMMDQARELFL------VMPVRNSVSWNAMISGYVESGDLDLAKQL-- 152

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              ++  +       A++T ++K G +E AE  FE +  +N+++W A+I G+ ++   E 
Sbjct: 153 --FEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAEN 210

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L   M E G  PN  + +  L  C++L    +G   H  + K  ++     GT+++ 
Sbjct: 211 GLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLS 270

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G++ +A K    M +    V+WNA I+G+ ++   E+A+  F +M       D  
Sbjct: 271 MYCKCGDLEDAWKLFLVMPQK-DVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWI 329

Query: 423 TYSSILKACS 432
           T+ ++L AC+
Sbjct: 330 TFVAVLSACN 339



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 122/230 (53%), Gaps = 11/230 (4%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           +++  + K G I+      ++MP  ++ + N ++AGY +N   +     F ++     +P
Sbjct: 166 AMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRP 225

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N  + S++L  C +LSA+  GKQ+H    K           +LL+MY KCG +EDA  +F
Sbjct: 226 NPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLF 285

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
             + Q++V++W A+I+G+ QHG  EK L L   MR++G+ P+  TF   L++C     +H
Sbjct: 286 LVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSAC-----NH 340

Query: 337 MGYM------FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
            G++      F++ V   G+       T +VD+    G++ EA   +K+M
Sbjct: 341 AGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKM 390



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    L+LG++ H LI K+ V  +     SL++MY KCGD++    +   MP  D
Sbjct: 233 VLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKD 292

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           + + N +++GYA++   ++A   F K+    ++P+  T+  +L+ C     +D G
Sbjct: 293 VVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLG 347



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 104/260 (40%), Gaps = 24/260 (9%)

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS-LLPSLATC 440
           KS++ +S N  I    R+     A+  F  M          T++S+L   S     +   
Sbjct: 1   KSSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTV----TWNSMLAGYSNRRGKIKVA 56

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
            Q+  RI     E ++   + ++  Y      E A   F Q+   D  SWN+MI  +SQN
Sbjct: 57  RQLFDRIP----EPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQN 112

Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
           G   +A  LF  M V      N+           SG V+ G       + E   +     
Sbjct: 113 GMMDQARELFLVMPVRNSVSWNAMI---------SGYVESGDLDLAKQLFEVAPVRSVVA 163

Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA----CRCHSDLKMAEFISKQI 616
           ++ M+    + GK+E+A  +   +P+K     W  + A     C+  + LK+ + + +  
Sbjct: 164 WTAMITGFMKFGKIELAEKYFEEMPMKNLV-TWNAMIAGYIENCQAENGLKLFKRMVESG 222

Query: 617 LELDPDD-AAVYVTLSNMYA 635
              +P   ++V +  SN+ A
Sbjct: 223 FRPNPSSLSSVLLGCSNLSA 242


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 181/561 (32%), Positives = 302/561 (53%), Gaps = 14/561 (2%)

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           Q P  +I   N L+ G+  N LF +    FL +    +  + +T+  +L  C   S    
Sbjct: 72  QFP--NIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKL 129

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G  LH+  +K  +    A   +LL++Y   G + DA  VFE + +R+V++WTA+ +G+  
Sbjct: 130 GIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTT 189

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
            G + + + L   M E G+ P+ Y     L++C  + +   G      + +  M    FV
Sbjct: 190 AGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFV 249

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            T +V++Y+  G++ +A+     MG+    V+W+  I G+  N   +E IE F QM++ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMGEK-DIVTWSTMIQGYASNSFPKEGIEFFLQMLQEN 308

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              D+F+    L +C+ L +L   E   S I + +F +N+ + ++LI+ Y KCG+     
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            VF ++   D+V  N+ I   ++NG  + +  +F +    GI P  STFL +L  C H+G
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAG 428

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           L+QDG + F ++   Y +     HY CMVDL GRAG L+ A   I ++P++P A +W  L
Sbjct: 429 LIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
            + CR   D ++AE + K+++ L+P +A  YV LSN+Y+ +G   +A E R +M  K + 
Sbjct: 489 LSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMK 548

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNE 706
           K PG SWIE+   ++ F + +KSH    K+Y KL+ L  ++  +G            ++E
Sbjct: 549 KIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDE 608

Query: 707 KEDRVL-YHSERLAVGFGLIS 726
           +++RVL +HSE+LAV FGLIS
Sbjct: 609 EKERVLGHHSEKLAVAFGLIS 629



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/413 (24%), Positives = 186/413 (45%), Gaps = 4/413 (0%)

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
           S  +  KQ+H   +       T + N LL   +       +  +F      N+  +  +I
Sbjct: 24  STFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLI 83

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
           NGF  +  + + L L   +R+ G++ + +TF + L +C    N  +G   H+ V+K G  
Sbjct: 84  NGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFN 143

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
                 T+++ +YSG G + +A K  +E+ +  S V+W A  +G+    K  EAI+ F +
Sbjct: 144 HDVAAMTSLLSIYSGSGRLNDAHKVFEEIPER-SVVTWTALFSGYTTAGKHREAIDLFKK 202

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           MV      D +    +L AC  +  L + E I   + + + + N  V ++L+  Y KCG 
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
            E A  VF  +   D+V+W++MI+ Y+ N   ++ I  F +M+ E ++P   + +  LS+
Sbjct: 263 MEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSS 322

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           C+  G +  G+    S++  +  L      + ++D+  + G +         +  K    
Sbjct: 323 CASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381

Query: 592 IWRPLFAACR-CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADA 643
           +   +    +  H  L  A F   + L + P D + ++ L      AGL  D 
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISP-DGSTFLGLLCGCVHAGLIQDG 433



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 178/379 (46%), Gaps = 9/379 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C+R    +LG   H+L+ K     D     SL+++Y+  G +     V +++P   
Sbjct: 117 VLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERS 176

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL-- 240
           + +   L +GY       +A   F K+  + V+P+ Y    +L+ C  +  +D G+ +  
Sbjct: 177 VVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVK 236

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H + M++Q    + V   L+ +Y KCG ME A SVF+ + ++++++W+ +I G+  +   
Sbjct: 237 HMEEMEMQ--KNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFP 294

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ +     M ++ + P++++    L+SCASL    +G    + + +       F+  A+
Sbjct: 295 KEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY+  G +    +  KEM K    V  NA I+G  +N   + +   F Q  +   + D
Sbjct: 355 IDMYAKCGAMARGFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRI--VKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
             T+  +L  C     +    +  + I  V +   +  H G  +++ + + G  +DA R+
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYG-CMVDLWGRAGMLDDAYRL 472

Query: 479 FSQL-TAADVVSWNSMIKA 496
              +    + + W +++  
Sbjct: 473 ICDMPMRPNAIVWGALLSG 491



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 3/185 (1%)

Query: 112 ESLLDKQF-VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E+L   QF ++  LS C+    L+LG    +LI +     + F+  +L++MYAKCG +  
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              V K+M   DI   N  ++G AKN     +F+ F + + + + P+  T+  +L  C  
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQR-NVISWT 288
              I +G +       +  L +T      ++ ++ + GM++DA  +   +  R N I W 
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWG 486

Query: 289 AIING 293
           A+++G
Sbjct: 487 ALLSG 491


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/601 (30%), Positives = 312/601 (51%), Gaps = 49/601 (8%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +L G+A ++    A   ++++  +   PN Y++  +L  C    A +EG+Q+HAQ +K
Sbjct: 33  NTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLK 92

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEG---------------------------- 278
           L       V  +L++MY + G +EDA  VF+                             
Sbjct: 93  LGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKV 152

Query: 279 ---LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
              + +R+V+SW A+I G+ ++G YE+ L L   M    + P+E T    +++CA   + 
Sbjct: 153 FDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSI 212

Query: 336 HMGYMFHAQVIK----RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
            +G   H+ V       G +    +  A++D+YS  G++ E    L E       VSWN 
Sbjct: 213 ELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV-ETAFGLFEGLSCKDVVSWNT 271

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS- 450
            I G+      +EA+  F +M+R+    ++ T  S+L AC+ L ++     IH  I K  
Sbjct: 272 LIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKL 331

Query: 451 -KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
               +   + +SLI+ Y KCG  E A +VF+ +    + SWN+MI  ++ +GRA  A  L
Sbjct: 332 KGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDL 391

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F +M    + P + TF+ +LSACSHSGL+  G+++F+SM ++Y + P+  HY CM+DLLG
Sbjct: 392 FSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLG 451

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT 629
            +G  + A   I  +P++P   IW  L  AC+ H +L++AE  ++++++++P+++  YV 
Sbjct: 452 HSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVL 511

Query: 630 LSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEK 689
           LSN+YA AG   D    R ++  K + K PGCS IEV + ++ F   +K H    ++Y  
Sbjct: 512 LSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRREIYHM 571

Query: 690 LKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLPAKNKFECSRT 738
           L+++  Q+E+ G   +            KE  + +HSE+LA+ FGLIS     K    + 
Sbjct: 572 LEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 631

Query: 739 L 739
           L
Sbjct: 632 L 632



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 195/406 (48%), Gaps = 41/406 (10%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A SVFE + + N++ W  ++ G     D    L +   M   G  PN Y+F   L SCA 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS---GL--------------------- 367
            +    G   HAQV+K G  L  +V T+++ MY+   GL                     
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 368 -------GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
                  G+   A+K   E+ +    VSWNA I G+  N + EEA+E F +M+R +   D
Sbjct: 137 ITGYASRGDFRSARKVFDEITER-DVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSK----FESNVHVGSSLIEAYNKCGSWEDAE 476
           E T  S++ AC+   S+    Q+HS +        F S++ + ++LI+ Y+KCG  E A 
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
            +F  L+  DVVSWN++I  Y+     ++A++LF++M+  G  P + T L+VL AC+H G
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 537 LVQDGQKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
            +  G+ +   + K+  G+  E +  + ++D+  + G +E A    +++  +  +  W  
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS-WNA 374

Query: 596 LFAACRCHSDLKMA--EFISKQILELDPDDAAVYVTLSNMYAEAGL 639
           +      H     A   F   +   ++PDD   +V L +  + +GL
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDD-ITFVGLLSACSHSGL 419



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 210/451 (46%), Gaps = 50/451 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK------------------ 164
           +L  C++ +  E GR+ HA + K     D++V  SL++MYA+                  
Sbjct: 70  LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129

Query: 165 ---C----------GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
              C          GD +S   V  ++   D+ S N ++ GY +N  +++A   F ++  
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ----YLSKTAVSNALLTMYIKCG 267
            +V+P+  T  ++++ C    +I+ G+Q+H+          + S   + NAL+ +Y KCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            +E A  +FEGL  ++V+SW  +I G+     Y++ L L   M   G  PN+ T    L 
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309

Query: 328 SCASLRNSHMGYMFHAQVIK--RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           +CA L    +G   H  + K  +G+     + T+++DMY+  G+I EA  Q+       S
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDI-EAAHQVFNSMLYRS 368

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
             SWNA I GF  + +   A + FS+M  N    D+ T+  +L ACS    L    QI  
Sbjct: 369 LSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFK 428

Query: 446 RIVKS-----KFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQ 499
            + +      K E   H G  +I+     G +++AE +   +    D V W S++KA  +
Sbjct: 429 SMTQDYNLTPKLE---HYG-CMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKK 484

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
           +G    A    +K++   I P NS    +LS
Sbjct: 485 HGNLELAESFAQKLI--KIEPENSGSYVLLS 513



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 223/514 (43%), Gaps = 71/514 (13%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKT----AVCGDQFVTASLVNMYAKCGDIKSM 171
           D+  ++ V+S C++   +ELGR+ H+ +              +  +L+++Y+KCGD+++ 
Sbjct: 195 DEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETA 254

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             + + +   D+ S N L+ GY    L+ +A   F ++      PN  T  ++L  C  L
Sbjct: 255 FGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHL 314

Query: 232 SAIDEGKQLHAQT-MKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            AID G+ +H     KL+ ++ +T++  +L+ MY KCG +E A  VF  ++ R++ SW A
Sbjct: 315 GAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNA 374

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I GF  HG       L   MR + ++P++ TF   L++C     SH G +   + I + 
Sbjct: 375 MIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC-----SHSGLLDLGRQIFKS 429

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
           M   D+  T  ++ Y  + ++         +G S           G F+  + EE I   
Sbjct: 430 MT-QDYNLTPKLEHYGCMIDL---------LGHS-----------GLFK--EAEEMIHTM 466

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI--EAYN 467
                     D   + S+LKAC    +L   E    +++K + E++   GS ++    Y 
Sbjct: 467 PM------EPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENS---GSYVLLSNIYA 517

Query: 468 KCGSWEDAERVFSQLTAADV--VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTF 525
             G WED  RV   L    +  V   S I+  S         ++ E ++ + + P     
Sbjct: 518 TAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDS---------VVHEFIIGDKLHPRRREI 568

Query: 526 LAVLS----ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             +L         +G   D  +V + M +E+    E A       L   + KL IA   I
Sbjct: 569 YHMLEEMDVQLEEAGFAPDTSEVLQEMEEEW---KEGA-------LRHHSEKLAIAFGLI 618

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
           S  P      I + L     CH   K+   I K+
Sbjct: 619 STKP-GTKLTIVKNLRVCRNCHEATKLISKIYKR 651


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 199/677 (29%), Positives = 338/677 (49%), Gaps = 79/677 (11%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           E+ SYC        GR  H LI       + FV  +LV MY++CG ++    V  ++   
Sbjct: 161 ELPSYCC-------GRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRK 213

Query: 182 ---DIASCNCLLAGYAKNALFDQAFSFFLKLDGI------DVQPNHYTYSTMLAICGSLS 232
              D+ S N ++A + K +    A   F ++  I      + + +  +   +L  C SL 
Sbjct: 214 GIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLK 273

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
           A+ + K++H+  ++    +   V NAL+  Y KCG M DA  VF  +  ++V+SW A++ 
Sbjct: 274 ALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVT 333

Query: 293 GFKQHGDYEKPLRLVCLMRE-----------------------------------DGIDP 317
           G+ Q G++     L   MR+                                   DG +P
Sbjct: 334 GYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEP 393

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGM------------ALGDFVGTAIVDMYS 365
           N  T    L++CASL     G   HA  +K+ +                 V  A++DMYS
Sbjct: 394 NSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYS 453

Query: 366 GLGEIWEAKKQLKEMGKSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--DEF 422
                  A+     + +   +V +W   I G+ +   + +A++ FS+M+    A   + +
Sbjct: 454 KCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAY 513

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVH-VGSSLIEAYNKCGSWEDAERVFS 480
           T S IL AC+ L +L   +QIH+ + +  ++E +V+ V + LI+ Y+KCG  + A  VF 
Sbjct: 514 TISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFD 573

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
            +   + VSW SM+  Y  +GR ++A+ +F+KM   G  P + +FL +L ACSHSG+V  
Sbjct: 574 SMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQ 633

Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
           G   F+ M ++Y ++    HY+C++DLL R G+L+ A   I  +P++P+A IW  L +AC
Sbjct: 634 GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
           R HS++++AE+   +++ +  ++   Y  +SN+YA A    D    R+LMK   I K PG
Sbjct: 694 RVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPG 753

Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKED 709
           CSW++       FF  ++SH   P++Y  L++L+ +I+ +G+            D EK +
Sbjct: 754 CSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNN 813

Query: 710 RVLYHSERLAVGFGLIS 726
            +  HSE+LA+ +GL++
Sbjct: 814 LLSEHSEKLALAYGLLT 830



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 175/367 (47%), Gaps = 33/367 (8%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL--------------------QYL 250
           G DV P H+  +++L  C S++ +   +Q+H + +                       Y+
Sbjct: 26  GRDVSPTHF--ASLLKECRSVNTV---RQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYV 80

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
           S  ++   ++  Y+ CG  +DA SV E +     + W  ++    + G  ++ + + C M
Sbjct: 81  SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRM 140

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
              G  P+ +T   AL +C  L +   G   H  +   G     FV  A+V MYS  G +
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSL 200

Query: 371 WEAKKQLKEMGKSA--SSVSWNAQIAGFFRNQKTEEAIEAFSQM--VRNDAACDE----F 422
            +A     E+ +      +SWN+ +A   +      A+E FS+M  + ++ A +E     
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDII 260

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +  +IL AC+ L +L   ++IHS  +++   ++  V ++LI+ Y KCGS  DA +VF+ +
Sbjct: 261 SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM 320

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVVSWN+M+  Y+Q+G    A  LFE M  E I     T+ AV++  +  G  Q+  
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380

Query: 543 KVFESMV 549
             F+ M+
Sbjct: 381 DAFQQMI 387



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 169/368 (45%), Gaps = 58/368 (15%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ +L  C+  + L   +  H+   +     D FV  +L++ YAKCG +   V V   M 
Sbjct: 262 IVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVME 321

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFF--------------------------------- 206
           + D+ S N ++ GY ++  F  AF  F                                 
Sbjct: 322 FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALD 381

Query: 207 ----LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS----------- 251
               + LDG   +PN  T  ++L+ C SL A+ +G ++HA ++K   LS           
Sbjct: 382 AFQQMILDG--SEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439

Query: 252 -KTAVSNALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVC 308
               V NAL+ MY KC   + A S+F+ +   +RNV++WT +I G+ Q+GD    L++  
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499

Query: 309 LM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMY 364
            M  +   + PN YT +  L +CA L    MG   HA V +         FV   ++DMY
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           S  G++  A+     M K  + VSW + ++G+  + + +EA++ F +M +     D+ ++
Sbjct: 560 SKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISF 618

Query: 425 SSILKACS 432
             +L ACS
Sbjct: 619 LVLLYACS 626



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 234/536 (43%), Gaps = 65/536 (12%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +V  Y  CG  K  ++V++++        N L+  + K    D+A     ++     +P+
Sbjct: 89  VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
           H+T    L  CG L +   G+ LH       + S   V NAL+ MY +CG +EDA  VF+
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208

Query: 278 GLVQR---NVISWTAIINGFKQHGDYEKPLRLVC----LMREDGIDPNEYTFTVA--LAS 328
            + ++   +VISW +I+    +  +    L L      ++ E   +      ++   L +
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           CASL+        H+  I+ G     FV  A++D Y+  G + +A K    M +    VS
Sbjct: 269 CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM-EFKDVVS 327

Query: 389 WNAQIAGF------------FRNQKTE-----------------------EAIEAFSQMV 413
           WNA + G+            F N + E                       EA++AF QM+
Sbjct: 328 WNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMI 387

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES------------NVHVGSS 461
            + +  +  T  S+L AC+ L +L+   +IH+  +K    S            ++ V ++
Sbjct: 388 LDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNA 447

Query: 462 LIEAYNKCGSWEDAERVFSQLT--AADVVSWNSMIKAYSQNGRARKAIILFEKMVVE--G 517
           LI+ Y+KC S++ A  +F  +     +VV+W  MI  Y+Q G +  A+ +F +M+ +   
Sbjct: 448 LIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYA 507

Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS-CMVDLLGRAGKLEI 576
           + P   T   +L AC+H   ++ G+++   + + +   P     + C++D+  + G ++ 
Sbjct: 508 VAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDT 567

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE--FISKQILELDPDDAAVYVTL 630
           A     ++P K     W  + +    H   K A   F   Q     PDD +  V L
Sbjct: 568 ARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLL 622



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 159/328 (48%), Gaps = 35/328 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCG------------DQFVTASLVNMYAKCGD 167
           +I +LS C+    L  G   HA   K  +              D  V  +L++MY+KC  
Sbjct: 398 IISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRS 457

Query: 168 IKSMVAVVKQMPY--LDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYST 223
            K+  ++   +P    ++ +   ++ GYA+    + A   F ++      V PN YT S 
Sbjct: 458 FKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISC 517

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +L  C  L+A+  GKQ+HA   +      +   V+N L+ MY KCG ++ A +VF+ + +
Sbjct: 518 ILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPK 577

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-- 339
           RN +SWT++++G+  HG  ++ L +   M++ G  P++ +F V L +C     SH G   
Sbjct: 578 RNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYAC-----SHSGMVD 632

Query: 340 --MFHAQVIKRGMALGDFVGTA-----IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
             + +  +++R     D V +A     ++D+ +  G + +A K ++EM    S+V W A 
Sbjct: 633 QGLNYFDIMRRDY---DVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVAL 689

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           ++    +   E A  A +++V   A  D
Sbjct: 690 LSACRVHSNVELAEYALNKLVNMKAEND 717


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/623 (29%), Positives = 325/623 (52%), Gaps = 17/623 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D +  + V+  C+R   L  GRR H LI +  +  D +V+  LV MY KCG ++    V 
Sbjct: 33  DLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVF 92

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA-I 234
           +  P  ++ S   L+   A++    +A + F ++    +QP+  +++  +  C +    +
Sbjct: 93  EATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFL 152

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G+ LHA   +  +      + +L++MY KCG +E++   FE + + N +SW A+I  F
Sbjct: 153 PAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAF 212

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            +H    + LR +  M  +GI     T+   +++             H  +++ G     
Sbjct: 213 AEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTG--FDQ 270

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            V   I++MY   G + +A+   K M +    ++WN  IA + ++  T EA+  +  M  
Sbjct: 271 DVVNVILNMYGKCGCLQDAEAMFKSMSQP-DVIAWNTMIAAYSQHGHTSEALRFYELMQE 329

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D++TY S++ AC+ L  +   +Q+H R+    F+    + +SL+  Y KCG  + 
Sbjct: 330 EGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDV 388

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +F + TA   V+WN+MI AY+Q+   ++A  LF  M ++G  P+  TF++VLSAC++
Sbjct: 389 ARSIFDK-TAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACAN 447

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           +GL ++    F  M +++G+ P   HY CMV+ LG+AG+L  A   I  +P +P    W 
Sbjct: 448 AGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWT 507

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
              A CR H D+K  +F +K  + +DP+ +  YV L+ ++A+AG   +A   RKLM  + 
Sbjct: 508 SFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRG 567

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN--------- 705
           I K  G S I++   +Y F + ++S+    +++++LK+L ++++  G+  +         
Sbjct: 568 IRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVE 627

Query: 706 --EKEDRVLYHSERLAVGFGLIS 726
             +KE  +  HSERLA+ FG+IS
Sbjct: 628 AGQKEPLLFAHSERLAIAFGIIS 650


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 309/602 (51%), Gaps = 55/602 (9%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
           N +L GYA ++    A   ++ +  + + PN YT+  +L  C    A +EG+Q+H   +K
Sbjct: 35  NTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLK 94

Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS-------------------- 286
           L Y     V  +L++MY + G +EDA  VF+    R+V+S                    
Sbjct: 95  LGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEM 154

Query: 287 -----------WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
                      W A+I+G+ + G Y++ L L   M +  + P+E T    L++CA  R+ 
Sbjct: 155 FDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSV 214

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   H+ +   G      +  A++D+YS  G++ E    L E       VSWN  I G
Sbjct: 215 ELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQV-ETACGLFEGLSCKDVVSWNTLIGG 273

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFES 454
           +      +EA+  F +M+R+  + ++ T  SIL AC+ L ++     IH  I K  K  +
Sbjct: 274 YTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVT 333

Query: 455 NV-HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           N   + +SLI+ Y KCG  E A +VF+ +    + SWN+MI  ++ +GRA     LF +M
Sbjct: 334 NAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRM 393

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
              GI P + TF+ +LSACSHSG +  G+ +F+SM ++Y I P+  HY CM+DLLG +G 
Sbjct: 394 RKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGL 453

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
            + A   I  +P++P   IW  L  ACR H +L++AE  ++ +++++P++   YV LSN+
Sbjct: 454 FKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNI 513

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY------ 687
           YA AG   +  + R L+  K + K PGCS IE+ ++++ F   +K H    ++Y      
Sbjct: 514 YATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEM 573

Query: 688 ----------EKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
                         +++Q++E     +  KE  + +HSE+LA+ FGLIS     K    +
Sbjct: 574 EALLEEAGFVPDTSEVLQEME-----EEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 628

Query: 738 TL 739
            L
Sbjct: 629 NL 630



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 195/421 (46%), Gaps = 50/421 (11%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK------------------ 164
           +L  C++ +  E G++ H  + K     D +V  SL++MYA+                  
Sbjct: 72  LLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRD 131

Query: 165 -------------CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
                         G+I+S   +  ++P  D+ S N +++GYA+   + +A   F ++  
Sbjct: 132 VVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMK 191

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
            +V+P+  T  T+L+ C    +++ G+Q+H+      + S   + NAL+ +Y KCG +E 
Sbjct: 192 TNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVET 251

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A  +FEGL  ++V+SW  +I G+     Y++ L L   M   G  PN+ T    L +CA 
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVG-----TAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           L    +G   H  + K+   L D        T+++DMY+  G+I EA  Q+       S 
Sbjct: 312 LGAIDIGRWIHVYIDKK---LKDVTNAPSLRTSLIDMYAKCGDI-EAAHQVFNSMLHKSL 367

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
            SWNA I GF  + +     + FS+M +N    D+ T+  +L ACS    L     I   
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 447 I-----VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQN 500
           +     +  K E   H G  +I+     G +++A+ +   +    D V W S++KA  ++
Sbjct: 428 MTQDYDITPKLE---HYG-CMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRH 483

Query: 501 G 501
           G
Sbjct: 484 G 484



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 166/337 (49%), Gaps = 31/337 (9%)

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           A SVF  + + N + W  ++ G+    D    L+L  +M   G+ PN YTF   L SCA 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE------------ 379
            +    G   H  V+K G     +V T+++ MY+  G + +A K                
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 380 -MGKSASS-----------------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
             G ++S                  VSWNA I+G+      +EA+E F +M++ +   DE
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T  ++L AC+   S+    Q+HS I    F SN+ + ++LI+ Y+KCG  E A  +F  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           L+  DVVSWN++I  Y+     ++A++LF++M+  G  P + T +++L AC+H G +  G
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 542 QKVFESMVKEY-GILPEEAHYSCMVDLLGRAGKLEIA 577
           + +   + K+   +    +  + ++D+  + G +E A
Sbjct: 319 RWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAA 355



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 16/305 (5%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++ VLS C++   +ELGR+ H+ I       +  +  +L+++Y+KCG +++   + 
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +   D+ S N L+ GY    L+ +A   F ++      PN  T  ++L  C  L AID
Sbjct: 257 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316

Query: 236 EGKQLHAQT-MKLQYLSKT-AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            G+ +H     KL+ ++   ++  +L+ MY KCG +E A  VF  ++ +++ SW A+I G
Sbjct: 317 IGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 376

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           F  HG       L   MR++GI+P++ TF   L++C     SH G +   + I + M   
Sbjct: 377 FAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSAC-----SHSGKLDLGRHIFKSMT-Q 430

Query: 354 DFVGTA-------IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAI 406
           D+  T        ++D+    G   EAK+ +K M      V W + +    R+   E A 
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA- 489

Query: 407 EAFSQ 411
           E+F++
Sbjct: 490 ESFAR 494


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 166/520 (31%), Positives = 287/520 (55%), Gaps = 10/520 (1%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           PN +T+   +  C +LS    GKQLH    K   L +  V  +L++MY KC ++++A  +
Sbjct: 8   PNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKL 67

Query: 276 FEGLVQ--RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           F+   Q  +  + + ++++G+  +   +  + L C MRE G++ N  T    +  C    
Sbjct: 68  FDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPG 127

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
           N  +G   H   +K G+ +   VG  ++ MY   GEI   +K   EM +    ++WNA I
Sbjct: 128 NLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL-ITWNAMI 186

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
            G+ +N      +E + +M       D  T   +L +C+ L +L+  +++  ++    F 
Sbjct: 187 NGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFS 246

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           SN  + ++L+  Y +CG+ + A  +F  +    VVSW ++I  Y  +G+   A+ LF++M
Sbjct: 247 SNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEM 306

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           +  GI+P  + F++VLSACSH+GL   G   F  M ++YG+ P   HYSCMVDLLGRAG+
Sbjct: 307 IRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGR 366

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNM 633
           L  A   I ++ ++    +W  L  AC+ H ++++AE   +Q++EL+P +   YV LSN+
Sbjct: 367 LNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLSNV 426

Query: 634 YAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
           Y EAG        R LM+ +++ K+PGCS++E   +++ FF+ +++H +  ++Y+KL +L
Sbjct: 427 YTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIYKKLNEL 486

Query: 694 MQQIEDI-GHTDNEKEDRVLY------HSERLAVGFGLIS 726
              ++D+ G   N+ E R  Y      HSE+LAV F L++
Sbjct: 487 ENLVKDLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLN 526



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 166/347 (47%), Gaps = 6/347 (1%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   G  PN +TF  A+ SCA+L     G   H  V K G  L  FV T+++ MY     
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 370 IWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           I  A+K   E  +S   +V +N+ ++G+  N + ++ +  F +M       +  T   ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           + C +  +L     +H   VK   + +  VG+ L+  Y K G  +   ++F ++    ++
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +WN+MI  Y+QNG A   + L+++M  +G  P   T + VLS+C+H G +  G++V E  
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEV-ERK 239

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           ++ +G        + +V++  R G L+ A      +P+K     W  +      H   ++
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS-WTAIIGGYGMHGQGEV 298

Query: 609 AEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           A  +  +++   + PD  A +V++ +  + AGL     +   +M+ K
Sbjct: 299 AVGLFDEMIRGGIKPDGTA-FVSVLSACSHAGLTNKGLDYFGVMERK 344



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 179/412 (43%), Gaps = 22/412 (5%)

Query: 14  SSFTFPYPVVE--------QVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSD 65
           ++FTFP+ +            K   C+  KT  + EPF   S   ++ K           
Sbjct: 9   NAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKC---------S 59

Query: 66  LIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFV--IEV 123
           LI N     +E   SR      N       ++    + V + C   E  ++   V  + +
Sbjct: 60  LIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGL 119

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           +  C     L LG   H    K  +  D  V   L+ MY K G+I     +  +MP   +
Sbjct: 120 VQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
            + N ++ GYA+N L +     + +++     P+  T   +L+ C  L A+  GK++  +
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERK 239

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
                + S   ++NAL+ MY +CG ++ A  +F+G+  ++V+SWTAII G+  HG  E  
Sbjct: 240 MEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVA 299

Query: 304 LRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L   M   GI P+   F   L++C  A L N  + Y F     K G+  G    + +V
Sbjct: 300 VGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDY-FGVMERKYGLRPGAEHYSCMV 358

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
           D+    G + EA++ ++ M   A    W A +     ++  E A  AF Q++
Sbjct: 359 DLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVI 410


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/583 (31%), Positives = 313/583 (53%), Gaps = 27/583 (4%)

Query: 158 LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPN 217
           +++ Y +   +   + +  +MP  D+ S N +++G  +    D A   F      D  P 
Sbjct: 72  MISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMF------DEMPE 125

Query: 218 H--YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
               +++ M+  C     +D+ ++L  Q      +   A  NA++  Y++ G ++DA  +
Sbjct: 126 RSVVSWTAMVNGCFRFGMVDQAERLFCQ----MPVKDIAAWNAMVHGYLQFGKVDDALKL 181

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F+ + ++NVISWT +I G  Q+    + L L   M    I     TFT  + +CA+    
Sbjct: 182 FKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAF 241

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           HMG   H  +IK G    ++V  +++ +Y+      +++K   EM     +V W A ++G
Sbjct: 242 HMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAV-WTALLSG 300

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           +  N+K E+A+  FS+M+RN    ++ T++S L +CS L +L   ++IH   VK    + 
Sbjct: 301 YSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTV 360

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
             VG+SL+  Y+  G+  DA  VF ++    +VSWNS+I   +Q+GR + A ++F +M+ 
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE-AHYSCMVDLLGRAGKL 574
               P   TF  +LSACSH G +Q G+K+F  +      +  +  HY+CMVD+LGR G+L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGEL 480

Query: 575 EIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMY 634
           + A   I ++ +KP   +W  L +ACR HSD+   E  +  I  LD   +A YV LSN+Y
Sbjct: 481 KEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540

Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLM 694
           A AG  +   + R  MK K I K+PG SW+ +  K + FFS ++ H    +++EKL+ L 
Sbjct: 541 ASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHC--LRIFEKLEFLR 598

Query: 695 QQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
           ++++++G+            D +KE+ + YHSERLA+ FGLI+
Sbjct: 599 EKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLIN 641



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 37/389 (9%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++V+ Y + G +   + + KQMP  ++ S   ++ G  +N    +A + F  +    ++ 
Sbjct: 164 AMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKS 223

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
              T++ ++  C +  A   G Q+H   +K  +L +  V+ +L+T+Y  C   ED+  VF
Sbjct: 224 TSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVF 283

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
             +V   V  WTA+++G+  +  +E  L +   M  + I PN+ TF   L SC++L    
Sbjct: 284 GEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLD 343

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
            G   H   +K G+    FVG ++V MYS  G + +A     E+ K  S VSWN+ I G 
Sbjct: 344 WGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKK-SIVSWNSIIVGC 402

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK--SKFES 454
            ++ + + A   F QM+R +   DE T++ +L ACS    L    ++   I    +  + 
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDR 462

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
            +   + +++   +CG  ++AE+                               L E MV
Sbjct: 463 KIQHYTCMVDILGRCGELKEAEK-------------------------------LIESMV 491

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
           V   +P    +LA+LSAC     V  G+K
Sbjct: 492 V---KPNEMVWLALLSACRMHSDVDRGEK 517



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 24/286 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+      +G + H  I K+    +++VTASL+ +YA C   +    V  +M +  
Sbjct: 231 VITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEK 290

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +A    LL+GY+ N   + A + F ++    + PN  T+++ L  C +L  +D GK++H 
Sbjct: 291 VAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHG 350

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   +   V N+L+ MY   G + DA SVF  + +++++SW +II G  QHG  + 
Sbjct: 351 VAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKW 410

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG----- 357
              +   M     +P+E TFT  L++C     SH G++      ++G  L  ++      
Sbjct: 411 AFVIFGQMIRLNKEPDEITFTGLLSAC-----SHCGFL------QKGRKLFYYISSGLNH 459

Query: 358 --------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                   T +VD+    GE+ EA+K ++ M    + + W A ++ 
Sbjct: 460 IDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSA 505



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 13/135 (9%)

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           +V + + +I  Y +     DA  +F ++   DVVSWNSMI    + G    A+ +F++M 
Sbjct: 65  HVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEM- 123

Query: 515 VEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
                P  S  ++ A+++ C   G+V   +++F  M      + + A ++ MV    + G
Sbjct: 124 -----PERSVVSWTAMVNGCFRFGMVDQAERLFCQMP-----VKDIAAWNAMVHGYLQFG 173

Query: 573 KLEIALIFISNLPIK 587
           K++ AL     +P K
Sbjct: 174 KVDDALKLFKQMPRK 188



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 13/120 (10%)

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
           ++A  VF Q+ +  V  +  MI  Y+++ R   A+ LF++M +  +   NS    ++S C
Sbjct: 52  DEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNS----MISGC 107

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEA--HYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
              G +    K+F+ M       PE +   ++ MV+   R G ++ A      +P+K  A
Sbjct: 108 VECGDIDTAVKMFDEM-------PERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIA 160


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 175/564 (31%), Positives = 295/564 (52%), Gaps = 2/564 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           L     +++L  C   E L+ G   H+ I +     +  ++  L+  Y K G+  +   V
Sbjct: 35  LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKV 94

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             +MP  ++ S    ++GYAKN  +  A   F ++    V+ N +TY ++L  C  L  +
Sbjct: 95  FDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCL 154

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           + G Q+H    K +++    V +AL+ ++ KCG MEDA  +FE + +R+V+SW A+I G+
Sbjct: 155 ERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGY 214

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
                 +   R+   M  +G+ P+ +T    L + +   N       H  +I+ G     
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI 274

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-QKTEEAIEAFSQMV 413
            +  +++D Y+    +  A    K M K    +S+ A + G+ R    + EA++ F  M 
Sbjct: 275 DLNGSLIDAYAKSEGMKSASALYKSMLKK-DVISFTAIMTGYARKCSYSREALDLFKDMQ 333

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                 D+ T+ ++L  C+ + SL+   QIH+  +K K   +V  G++L++ Y K G  E
Sbjct: 334 HIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIE 393

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           DA R F ++   +V+SW S+I  Y ++G   +AI L++KM  EG++P + TFL++L ACS
Sbjct: 394 DATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACS 453

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGL  +G + F +M+ +Y ILP   HYSCM+DL  R G+LE A   I  + IKP + +W
Sbjct: 454 HSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLW 513

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             +  AC  +  + + E  +  +L +DP+++A YV L+ +YA +G    A   R LM+ +
Sbjct: 514 GAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYR 573

Query: 654 EISKEPGCSWIEVYNKIYRFFSQN 677
            + K PG S I+  NK  R    N
Sbjct: 574 SLKKIPGYSIIQSTNKNMRRLQPN 597


>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
 gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
          Length = 703

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/628 (31%), Positives = 319/628 (50%), Gaps = 16/628 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITK-TAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           D Q +              LGR  HA   +  A     F+ A LVN+Y+K     +  A 
Sbjct: 14  DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           +   P+  + S    ++G A++     A S F  +  + ++PN +T+ +      S    
Sbjct: 74  LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133

Query: 235 DE-GKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
              G Q+H+  ++  YL     VS A L MY K G ++ A  +F  +  RNV++W A++ 
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
                G   + +     +RE G  PN  +      +CA      +G  FH  V+K G  +
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V  ++VD Y       +A+     MG   +SVSW + +A + +N   EEA  A+   
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWCSMVAAYAQNGAEEEAFAAYLGA 312

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            R+     +F  SS L  C+ L  L     +H+  V+S  ++N+ V S+L++ Y KCG  
Sbjct: 313 RRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCV 372

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSA 531
           EDAE++F +    ++V+WN+MI  Y+  G A+ A+++F+ M+  G   P   T + V+++
Sbjct: 373 EDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITS 432

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS  GL +DG ++FE+M + +GI P   HY+C+VDLLGRAG  E A   I  +P++P+  
Sbjct: 433 CSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSIS 492

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L  AC+ H   ++    ++++ ELDP D+  +V LSNM+A AG  A+A + RK MK
Sbjct: 493 VWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMK 552

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---- 707
              I K+PGCSW+   N ++ F +++  H    ++   L +L +Q++  G+  + +    
Sbjct: 553 NVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLY 612

Query: 708 -------EDRVLYHSERLAVGFGLISLP 728
                  E  V  HSE+LA+ FGLI +P
Sbjct: 613 DLEEEEKESEVFQHSEKLALAFGLICIP 640


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 310/567 (54%), Gaps = 6/567 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C++   LE   + H+ I  T      FV  +LV++Y+KC    S   V  QMP   
Sbjct: 34  VLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKS 93

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +++ + ++   DQ+F    ++  + ++ +  T++  LA C    ++ +G  +H 
Sbjct: 94  LVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC----SLPQGLSIHG 149

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              KL       ++N++++MYI+   ++ A SVF  L Q++++SWT I+ G+   GD  K
Sbjct: 150 YITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAK 209

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
              +   MR   + P+   F   ++ C    N  +  + H+ ++K G    D +   +V 
Sbjct: 210 VFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVA 269

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+   ++  A++    + +  S   W + I+G+ +     EA+  F+ ++R  +  +E 
Sbjct: 270 MYAKCKDLVSARRVFDAVHEK-SVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNEL 328

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T +++L AC+ + SL   E+I   I+ +   S++ V +SLI  + KCGS + A+ +F ++
Sbjct: 329 TLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERI 388

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDG 541
              D+  W++MI  Y+ +G  ++A+ LF KM  E GI+P    + +VL ACSHSGL++DG
Sbjct: 389 PNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDG 448

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            K F SM K++GI P   HYSC+VDLLGRAG +E+AL  I  +P+   A +W P  +AC 
Sbjct: 449 LKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACY 508

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            H +L++ EF +K + +L+P     +V ++N+Y   G   +A + R ++  + + KEPG 
Sbjct: 509 THHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGW 568

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYE 688
           S IE+   ++   ++ +SH E   ++E
Sbjct: 569 SQIEIDGAVHVLAAEGQSHLESIDIHE 595



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/468 (24%), Positives = 212/468 (45%), Gaps = 14/468 (2%)

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           K+ +F Q  S      G  V  + +T+  +L  C  L ++++  +LH+  +   + +   
Sbjct: 7   KHLIFKQIPSLSSHTSG--VHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVF 64

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V  AL+ +Y KC     A  VF+ +  ++++SW +II+   +    ++   ++  M+  G
Sbjct: 65  VQTALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLG 124

Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
           ++ +  TFT  LASC+  +    G   H  + K G+ L   +  +I+ MY  L +I  A 
Sbjct: 125 LELSSATFTGFLASCSLPQ----GLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGAL 180

Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
                + +  S VSW   + G+       +    F+QM       D   + +++  C L 
Sbjct: 181 SVFYTLHQK-SIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLS 239

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
            +L     +HS ++KS F+    + + L+  Y KC     A RVF  +    V  W SMI
Sbjct: 240 GNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMI 299

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             Y+Q G   +A+ LF  ++    RP   T   VLSAC+  G ++ G+++ E  +   G+
Sbjct: 300 SGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEI-EQYILLNGL 358

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
             +    + ++ +  + G ++ A      +P K  A +W  +      H   K A  +  
Sbjct: 359 GSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLA-VWSAMINGYAVHGMGKEALNLFH 417

Query: 615 QI---LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           ++   + + P DA VY ++    + +GL  D  +  + M+ K+   EP
Sbjct: 418 KMQNEVGIKP-DAIVYTSVLLACSHSGLIEDGLKYFRSMQ-KDFGIEP 463



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 14/296 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D    + ++S C     L L    H+L+ K+       +   LV MYAKC D+ S   V 
Sbjct: 225 DSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVF 284

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +    +     +++GYA+    ++A   F  L     +PN  T +T+L+ C  + ++ 
Sbjct: 285 DAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLR 344

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+++    +     S   V  +L+ M+ KCG ++ A+++FE +  +++  W+A+ING+ 
Sbjct: 345 MGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYA 404

Query: 296 QHGDYEKPLRLVCLMR-EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
            HG  ++ L L   M+ E GI P+   +T  L +C     SH G +       R M   D
Sbjct: 405 VHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLAC-----SHSGLIEDGLKYFRSMQ-KD 458

Query: 355 FV-------GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
           F         + +VD+    G +  A + ++EM     +  W   ++  + +   E
Sbjct: 459 FGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLE 514


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 217/758 (28%), Positives = 372/758 (49%), Gaps = 94/758 (12%)

Query: 31  CNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS 90
           C+ R+ V+         A  LF + P+R  L T  ++ +GY+ IE+ G    G+      
Sbjct: 168 CHSRQMVD---------AWNLFKQMPQR-NLVTWTVMISGYVRIEQHG---KGWDIFRMM 214

Query: 91  FPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCG 150
             +G   D  SN   V   S  + L    V+EVL                 L+ KT    
Sbjct: 215 HHEGASPDQ-SNFASV--LSAVTGLQDLGVLEVL---------------RPLVLKTGFES 256

Query: 151 DQFVTASLVNMYAKCGD-----IKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
           D  +  S++N+Y +        IK    +V++  Y    + + ++A  +     D A + 
Sbjct: 257 DVVIGTSILNVYTRDASALDIAIKFFDGMVERNEY----TWSTMIAALSHGGRIDAAIAV 312

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS-NALLTMYI 264
           + + D +   P+     T LA CG ++         A+ +  Q      VS NA++T Y+
Sbjct: 313 YGR-DPVKSIPSQTALLTGLARCGRIT--------EARILFEQIPDPIVVSWNAMITGYM 363

Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTV 324
           + GM+++A+ +F+ +  RN ISW  +I G+ Q+G  E+ L L+  +  +G+ P+  + T 
Sbjct: 364 QNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTS 423

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
           +  +C+ +     G   H+  +K G     +V  A++ MY     + E  +Q+    +  
Sbjct: 424 SFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNM-EYVRQVFNRMRVK 482

Query: 385 SSVSWNAQIAGFFRNQKTEEA------------------IEAFSQMVRNDAACDEF---- 422
            +VSWN+ IA   +N   E+A                  I A++Q  R D A + F    
Sbjct: 483 DTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTML 542

Query: 423 ---------TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
                      + +L  C  L S    +QIH+  +K   +S + V ++L+  Y KCG   
Sbjct: 543 HEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-A 601

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           D+ +VF  +   D+ +WN+ I   +Q+G  R+AI ++E M   G+ P   TF+ +L+ACS
Sbjct: 602 DSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS 661

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H+GLV +G + F+SM ++YG+ P   HY+CMVDLLGR G ++ A  FI ++PI+P   IW
Sbjct: 662 HAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIW 721

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
             L  AC+ H + ++    ++++   +P +A  YV LSN+Y+  G+  +  E RK+MK +
Sbjct: 722 SALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQR 781

Query: 654 EISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT---------- 703
            +SKEPGCSW+++ NK++ F + +K H ++ ++   L+ L   +   G+           
Sbjct: 782 GVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDI 841

Query: 704 -DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
            + +KE  +LYHSE+LAV +GL+  P     +  + L 
Sbjct: 842 DEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLR 879



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 114/525 (21%), Positives = 230/525 (43%), Gaps = 40/525 (7%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D+   ++ +   A+ G ++    V   MP+ DI + N +++ Y  + + + A   F  + 
Sbjct: 32  DKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAIS 91

Query: 211 GIDVQPNHYTYSTMLAICGSLSA----------------------IDEGKQLHAQTMKLQ 248
           G +V+      S    +   L A                      +  G    A+ +   
Sbjct: 92  GGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDA 151

Query: 249 YLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
             S+   S N+++T Y     M DA ++F+ + QRN+++WT +I+G+ +   + K   + 
Sbjct: 152 MPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIF 211

Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
            +M  +G  P++  F   L++   L++  +  +    V+K G      +GT+I+++Y+  
Sbjct: 212 RMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRD 271

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
               +   +  +     +  +W+  IA      + + AI  + +              SI
Sbjct: 272 ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR----------DPVKSI 321

Query: 428 LKACSLLPSLATCEQI-HSRIVKSKFESNVHVG-SSLIEAYNKCGSWEDAERVFSQLTAA 485
               +LL  LA C +I  +RI+  +    + V  +++I  Y + G  ++A+ +F ++   
Sbjct: 322 PSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           + +SW  MI  Y+QNGR+ +A+ L + +   G+ P+ S+  +   ACSH G ++ G++V 
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSD 605
              VK  G        + ++ + G+   +E      + + +K T   W    AA   ++ 
Sbjct: 442 SLAVKA-GCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVS-WNSFIAALVQNNM 499

Query: 606 LKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
           L+ A  I   +L     D   + T+ + YA+A    +A E  K M
Sbjct: 500 LEDARHIFDNMLS---RDVVSWTTIISAYAQAERGDEAVEFFKTM 541



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 56/384 (14%)

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
           L K+A S A +    + G + +A  VF+ +  R++I+W ++I+ +   G  E    L   
Sbjct: 31  LDKSAHS-ARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILF-- 87

Query: 310 MREDGID-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGL 367
              D I   N  T T+ L+  A L     G +  A+ +  GM   + V   A+V  Y   
Sbjct: 88  ---DAISGGNVRTATILLSGYARL-----GRVLDARRVFDGMPERNTVAWNAMVSCYVQN 139

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND----------- 416
           G+I  A++    M  S    SWN+ + G+  +++  +A   F QM + +           
Sbjct: 140 GDITMARRLFDAM-PSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGY 198

Query: 417 --------------------AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
                               A+ D+  ++S+L A + L  L   E +   ++K+ FES+V
Sbjct: 199 VRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDV 258

Query: 457 HVGSSLIEAYNKCGSWED-AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
            +G+S++  Y +  S  D A + F  +   +  +W++MI A S  GR   AI ++ +  V
Sbjct: 259 VIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPV 318

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + I P+ +  L  L+ C   G + + + +FE +       P    ++ M+    + G ++
Sbjct: 319 KSI-PSQTALLTGLARC---GRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVD 369

Query: 576 IALIFISNLPIKPTAPIWRPLFAA 599
            A      +P + T   W  + A 
Sbjct: 370 EAKELFDRMPFRNTIS-WAGMIAG 392



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
           R V    + + H  S+ I    + G   +A  VF  +   D+++WNSMI AY  +G    
Sbjct: 25  RSVHRALDKSAH--SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLED 82

Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
           A ILF+ +    +R    T   +LS  +  G V D ++VF+ M  E   +   A  SC V
Sbjct: 83  ARILFDAISGGNVR----TATILLSGYARLGRVLDARRVFDGM-PERNTVAWNAMVSCYV 137

Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
               + G + +A      +P +     W  +     CHS
Sbjct: 138 ----QNGDITMARRLFDAMPSRDVTS-WNSMVTG-YCHS 170


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 196/620 (31%), Positives = 318/620 (51%), Gaps = 20/620 (3%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G+  H    K+ V     V   L+ MY K         V  +M   D  + N ++ GY K
Sbjct: 226 GQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLK 285

Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
             + +++   FL+ LD    +P+  T +++L  CG L  +   K ++   ++  ++ ++ 
Sbjct: 286 LEMVEESVKMFLENLD--QFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLEST 343

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR--E 312
           V N L+ +Y KCG M  A  VF  +  ++ +SW +II+G+ Q GD  + ++L  +M   E
Sbjct: 344 VKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +  D   Y   ++L++   L +   G   H+  IK G+ +   V  A++DMY+  GE+ +
Sbjct: 404 EQADHITYLMLISLST--RLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGD 461

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           + K    MG +  +V+WN  I+   R       ++  +QM +N    D  T+   L  C+
Sbjct: 462 SLKIFNSMG-TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCA 520

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
            L +    ++IH  +++  +ES + +G++LIE Y+KCG  E + RVF +++  DVV+W  
Sbjct: 521 SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTG 580

Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
           MI AY   G   KA+  F  M   GI P +  F+A++ ACSHSGLV+ G   FE M   Y
Sbjct: 581 MIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHY 640

Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
            I P   HY+C+VDLL R+ K+  A  FI  +PI+P A IW  +  ACR   D++ AE +
Sbjct: 641 KIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERV 700

Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
           S++I+EL+PDD    +  SN YA           RK ++ K I K PG SWIE+  K++ 
Sbjct: 701 SRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHV 760

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE----------DRVLY--HSERLAV 720
           F S + S  +   +++ L+ L   +   G+  + +E           R L   HSERLA+
Sbjct: 761 FCSGDDSAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAI 820

Query: 721 GFGLISLPAKNKFECSRTLE 740
            FGL++       +  + L 
Sbjct: 821 AFGLLNTEPGTPLQVMKNLR 840



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/537 (25%), Positives = 270/537 (50%), Gaps = 8/537 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAK 195
           RR HAL+    + G  F +  L++ Y+      S ++V +++ P  ++   N ++  ++K
Sbjct: 24  RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSK 83

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N  F +A  F+ KL    V P+ YT+ +++  C  L   + G  ++ Q +++ + S   V
Sbjct: 84  NGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLYV 143

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            NAL+ MY + G++  A  VF+ +  R+++SW ++I+G+  HG YE+ L +   +R   I
Sbjct: 144 GNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWI 203

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
            P+ +T +  L + A+L     G   H   +K G+     V   ++ MY       +A++
Sbjct: 204 VPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARR 263

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              EM     SV++N  I G+ + +  EE+++ F + + +    D  T +S+L AC  L 
Sbjct: 264 VFDEM-VVRDSVTYNTMICGYLKLEMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLR 321

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L+  + I++ ++++ F     V + LI+ Y KCG    A  VF+ +   D VSWNS+I 
Sbjct: 322 DLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y Q+G   +A+ LF+ M++   +  + T+L ++S  +    ++ G+ +  + +K  GI 
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKS-GIY 440

Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
            + +  + ++D+  + G++  +L   +++    T   W  + +AC    D      ++ Q
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVT-WNTVISACVRFGDFATGLQVTTQ 499

Query: 616 IL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIEVYNK 669
           +   ++ PD A   VTL    + A  +   E    L++   E   + G + IE+Y+K
Sbjct: 500 MRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 207/451 (45%), Gaps = 49/451 (10%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C     L L +  +  + +     +  V   L+++YAKCGD+ +   V   M 
Sbjct: 310 VTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSME 369

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D  S N +++GY ++    +A   F  +  ++ Q +H TY  ++++   L+ +  GK 
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKG 429

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           LH+  +K       +VSNAL+ MY KCG + D+  +F  +   + ++W  +I+   + GD
Sbjct: 430 LHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGD 489

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +   L++   MR++ + P+  TF V L  CASL    +G   H  +++ G      +G A
Sbjct: 490 FATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +++MYS  G +  + +  + M +    V+W   I  +    + E+A+E+F  M ++    
Sbjct: 550 LIEMYSKCGCLESSFRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVP 608

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKS------KFESNVHVGSSLIEAYNKCGSWE 473
           D   + +++ ACS           HS +V+       K +++  +   +IE Y  C    
Sbjct: 609 DSVVFIALIYACS-----------HSGLVEKGLACFEKMKTHYKI-DPMIEHY-AC---- 651

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
                              ++   S++ +  KA    + M +E   P  S + +VL AC 
Sbjct: 652 -------------------VVDLLSRSQKISKAEEFIQAMPIE---PDASIWASVLRACR 689

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
            SG ++  ++V   +++   + P++  YS +
Sbjct: 690 TSGDMETAERVSRRIIE---LNPDDPGYSIL 717



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 160/341 (46%), Gaps = 38/341 (11%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           +E   D    + ++S  +R   L+ G+  H+   K+ +  D  V+ +L++MYAKCG++  
Sbjct: 402 MEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGD 461

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
            + +   M  LD  + N +++   +   F        ++    V P+  T+   L +C S
Sbjct: 462 SLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCAS 521

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L+A   GK++H   ++  Y S+  + NAL+ MY KCG +E +  VFE + +R+V++WT +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGM 581

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I  +  +G+ EK L     M + GI P+   F   + +C+           H+ ++++G+
Sbjct: 582 IYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACS-----------HSGLVEKGL 630

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAF 409
           A                       +++K   K    +   A +     R+QK  +A E  
Sbjct: 631 A---------------------CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669

Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
             M +  DA+     ++S+L+AC     + T E++  RI++
Sbjct: 670 QAMPIEPDAS----IWASVLRACRTSGDMETAERVSRRIIE 706


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 214/726 (29%), Positives = 344/726 (47%), Gaps = 139/726 (19%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           + R  HA I  +    + F+   L+N+Y K  +I     +  ++P  DI +   LL+ Y+
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82

Query: 195 KNA-------LFDQ--------------------------AFSFFLKLDGIDVQPNHYTY 221
            +        LF+                           A + F+++      P+ +T+
Sbjct: 83  SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142

Query: 222 STMLAICGSLSAI-DEGKQ---LHAQTMKLQYLSKTAVSNALLTMYIKCG---------M 268
           S++L+   +LS I DE +    LH + +KL  L   +V+NALL+ Y+ C          +
Sbjct: 143 SSVLS---ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQL 199

Query: 269 MEDAESVFE---------------------------------GLVQRNVISWTAIINGFK 295
           M  A  VF+                                 GL     ++W A+I+G+ 
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           + G YE+       M   GI  +EYT+T  +++C S  N  MG MF+      G  L   
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSC-NEKMG-MFNCGRQVHGYILRTV 317

Query: 356 V----------GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
           V            A++  Y+    + EA++   +M      +SWNA ++G+   Q+ EEA
Sbjct: 318 VEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKM-PVRDIISWNAVLSGYVNAQRIEEA 376

Query: 406 IEAFSQMVRNDA--------------------------------ACDEFTYSSILKACSL 433
              FS+M   +                                  CD + ++  + ACS+
Sbjct: 377 NSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCD-YAFAGAITACSV 435

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
           L SL   +QIHS++++   +S +  G++LI  Y++CG  E AE VF  +   D VSWN+M
Sbjct: 436 LGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAM 495

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I A +Q+G   KAI LFE+M+ E I P   TFL +L+AC+H+GL+++G+  F++M   YG
Sbjct: 496 IAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYG 555

Query: 554 ILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFIS 613
           I P E HY+ ++DLL RAG    A   I ++P +  APIW  L A CR H ++++    +
Sbjct: 556 ITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAA 615

Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRF 673
            ++LEL P     Y+ LSNMYA  G   +    R LM+ + + KEPGCSW+EV N ++ F
Sbjct: 616 DRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVF 675

Query: 674 FSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGF 722
              +  H E+  VY  L+QL+ +++ +G+  +            KE  +  HSE+LAV +
Sbjct: 676 LVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVY 735

Query: 723 GLISLP 728
           G++ LP
Sbjct: 736 GIMKLP 741


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 182/601 (30%), Positives = 310/601 (51%), Gaps = 45/601 (7%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  H+ I    +  +  +   L+  YA   D+ S   V  ++P  ++   N ++  Y  N
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
             + +    F  + G +V+P+HYT+  +L  C     I  G+++H    K+   S   V 
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           N L++MY KCG + +A  V + + +R+V+SW +++ G+ Q+  ++  L +   M    I 
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            +  T    L + ++    ++ Y                    + DM+  +G     KK 
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMY--------------------VKDMFFKMG-----KKS 273

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
           L         VSWN  I  + +N    EA+E +S+M  +    D  + +S+L AC    +
Sbjct: 274 L---------VSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
           L+  ++IH  I + K   N+ + ++LI+ Y KCG  E A  VF  + + DVVSW +MI A
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
           Y  +GR   A+ LF K+   G+ P +  F+  L+ACSH+GL+++G+  F+ M   Y I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444

Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQI 616
              H +CMVDLLGRAGK++ A  FI ++ ++P   +W  L  ACR HSD  +    + ++
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504

Query: 617 LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ 676
            +L P+ +  YV LSN+YA+AG   +    R +MK K + K PG S +EV   I+ F   
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564

Query: 677 NKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVLY---HSERLAVGFGLI 725
           ++SH +  ++Y +L  L+++++++G+         D E+ED+  +   HSE+LA+ F L+
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALM 624

Query: 726 S 726
           +
Sbjct: 625 N 625



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 138/310 (44%), Gaps = 34/310 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS    + +GR+ H   TK  +    FV   LV+MY KCG +     V+ +M   D
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N L+ GYA+N  FD A     +++ + +  +  T +++L                 
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPA--------------- 250

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
                  +S T   N    MY+K         +F  + +++++SW  +I  + ++    +
Sbjct: 251 -------VSNTTTEN---VMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVE 292

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L   M  DG +P+  + T  L +C       +G   H  + ++ +     +  A++D
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G + +A+   + M KS   VSW A I+ +  + +  +A+  FS++  +    D  
Sbjct: 353 MYAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 423 TYSSILKACS 432
            + + L ACS
Sbjct: 412 AFVTTLAACS 421



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 1/150 (0%)

Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
           P + T   +HSRI+      N  +G  L+ AY        A +VF ++   +V+  N MI
Sbjct: 53  PDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMI 112

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
           ++Y  NG   + + +F  M    +RP + TF  VL ACS SG +  G+K+  S  K  G+
Sbjct: 113 RSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGL 171

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
                  + +V + G+ G L  A + +  +
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 21/215 (9%)

Query: 102 NTVPVTCYSLESLL-------DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
           N +PV    L S +       D   +  VL  C     L LG++ H  I +  +  +  +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
             +L++MYAKCG ++    V + M   D+ S   +++ Y  +     A + F KL    +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQL-------HAQTMKLQYLSKTAVSNALLTMYIKCG 267
            P+   + T LA C     ++EG+         +  T +L++L+       ++ +  + G
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA------CMVDLLGRAG 460

Query: 268 MMEDAESVFEGL-VQRNVISWTAIINGFKQHGDYE 301
            +++A    + + ++ N   W A++   + H D +
Sbjct: 461 KVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495


>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 305/550 (55%), Gaps = 12/550 (2%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
            ++S C++   + +G + H+ I K     + ++ ++LV+MY KCG + S   +  +MP+ 
Sbjct: 84  RMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHR 143

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ + N L++GY      + A   FL++  + + P  ++ S +L  C  +     G Q+H
Sbjct: 144 NVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVH 203

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
             +MK  +     V   L+ +Y K   ++ +  +F+ + +RN+I+WT+++ G+       
Sbjct: 204 GLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPV 263

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
             + LV  M+  GI  N  T+   L+S +S  +       H ++I+ G+    ++   +V
Sbjct: 264 AAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLV 323

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSV------SWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
            +YS       +   L++  K  S V      SWNA I G       E A++ FS+M + 
Sbjct: 324 TVYSEC-----SSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQA 378

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D FT++S+L+A  ++ +L   +QIH+ ++K+ + SN++V + L+  Y +CGS  DA
Sbjct: 379 GIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDA 438

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
           +RVFS +   DV+SWNS++   + +G  R+A+ LFE+M   G++P N+TFL VLSAC H 
Sbjct: 439 KRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHV 498

Query: 536 GLVQDGQKVFESMVKEYGI-LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
           GL+  G + F+ M  +Y +  P   HYS MVDL  RAG L  A  FI+ +PI+P   +++
Sbjct: 499 GLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYK 558

Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            L +AC+ H ++++A   +K++L++ P+D  +YV LSN+ A  G   +    RK+M  + 
Sbjct: 559 ALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRG 618

Query: 655 ISKEPGCSWI 664
           + KEPG SWI
Sbjct: 619 VRKEPGYSWI 628



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 230/508 (45%), Gaps = 11/508 (2%)

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  D  SCN  +A                +L      P  +  + M++ C    ++  G 
Sbjct: 40  PGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           QLH+  +K+ + S   + +AL+ MY KCG +  A+ +F+ +  RNV++W ++I+G+   G
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
             E  + L   M + GIDP  ++ +  L  C  + ++ +G   H   +K G      VGT
Sbjct: 160 CPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGT 219

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            ++D+YS    I +A + + ++    + ++W + +AG+   Q+   A+     M R    
Sbjct: 220 CLIDLYSKGWNI-DASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIR 278

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC--GSWEDAE 476
            +  TY+ +L + S    L  C+Q+H RI++   ESN ++  +L+  Y++C   S ED  
Sbjct: 279 LNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFN 338

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +V S +T  D +SWN++I   S  G    A+  F KM   GI     TF +VL A     
Sbjct: 339 KVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMIS 398

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
            + +G+++  ++V + G        + +V +  R G +  A    S L  +     W  L
Sbjct: 399 TLDEGKQI-HALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFS-LMDRHDVISWNSL 456

Query: 597 FAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
            + C  H   + A  + +Q+    + PD+    V LS      GL     E   LM+   
Sbjct: 457 LSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSAC-RHVGLLDKGLEYFDLMRNDY 515

Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
             + P     E Y+ +   FS+    SE
Sbjct: 516 SLESPT---TEHYSSMVDLFSRAGYLSE 540



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 188/422 (44%), Gaps = 35/422 (8%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  VL  C R E  +LG + H L  K   C +  V   L+++Y+K  +I +   +   MP
Sbjct: 183 VSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMP 242

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +I +   ++AGYA       A      +  + ++ N+ TY+ +L+   S + +D  KQ
Sbjct: 243 ERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQ 302

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKC--GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +H + ++    S + +   L+T+Y +C    +ED   V  G+ + + ISW A+I G    
Sbjct: 303 VHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNL 362

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G+ E  L+    MR+ GID + +TFT  L +   +     G   HA V+K G      V 
Sbjct: 363 GNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQ 422

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             +V MY+  G I +AK+    M +    +SWN+ ++G   +    EA+E F QM R+  
Sbjct: 423 NGLVSMYARCGSINDAKRVFSLMDRH-DVISWNSLLSGCAYHGYGREAVELFEQMRRSGV 481

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             D  T+  +L AC                         HVG       +K   + D  R
Sbjct: 482 KPDNTTFLVVLSACR------------------------HVG-----LLDKGLEYFDLMR 512

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
               L +     ++SM+  +S+ G   +A      M +E   P  S + A+LSAC   G 
Sbjct: 513 NDYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIE---PGPSVYKALLSACQVHGN 569

Query: 538 VQ 539
           V+
Sbjct: 570 VE 571


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 291/546 (53%), Gaps = 3/546 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+  C  E+  + G   HAL  K  +     +  +LV+MY K GD+++ + V   M 
Sbjct: 44  LVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGML 103

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  S N  +  +     +      F K+   +V P   T S++L     L + D G++
Sbjct: 104 EQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGRE 163

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  ++K        V+N+L+ MY K G +E A ++FE +  RNV+SW A+I    Q+G 
Sbjct: 164 VHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGA 223

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             +  RLV  M++ G  PN  T    L +CA + +  MG   HA  I+RG+    F+  A
Sbjct: 224 ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNA 283

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMYS  G++  A+   +   K    VS+N  I G+ ++    E++  F QM       
Sbjct: 284 LIDMYSKCGQLSLARNIFERSEK--DDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 341

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  ++   L AC+ L      ++IH  +V+     +  + +SL++ Y K G    A ++F
Sbjct: 342 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 401

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           +++T  DV SWN+MI  Y  +G+   A  LFE M  +G+   + +++AVL+ACSH GLV 
Sbjct: 402 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 461

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+K F  MV +  I P++ HY+CMVDLLGRAG+L      I ++P    + +W  L  A
Sbjct: 462 KGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGA 520

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H ++++A++ ++ + EL P+ +  Y  + NMYAE G   +A + RKLMK +++ K P
Sbjct: 521 CRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNP 580

Query: 660 GCSWIE 665
             SW++
Sbjct: 581 AYSWVQ 586



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 2/297 (0%)

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
           +R+V+SW ++++ F  +G +    R +  M   G   N  +    + +C + +    G  
Sbjct: 3   ERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLS 62

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA  +K G+     +  A+VDMY   G++ EA  Q+ +     + VSWN+ I  F    
Sbjct: 63  IHALAVKVGLNTMVNLANALVDMYGKFGDV-EASMQVFDGMLEQNEVSWNSAIGCFLNAG 121

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
              + +  F +M  ++      T SS+L A   L S     ++H   +K   + ++ V +
Sbjct: 122 FYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVAN 181

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SL++ Y K GS E A  +F Q+   +VVSWN+MI    QNG   +A  L   M   G  P
Sbjct: 182 SLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECP 241

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
            + T + VL AC+    ++ G+++    ++  G++ +    + ++D+  + G+L +A
Sbjct: 242 NSITLVNVLPACARMASLKMGKQIHAWSIRR-GLMFDLFISNALIDMYSKCGQLSLA 297


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 174/574 (30%), Positives = 313/574 (54%), Gaps = 44/574 (7%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L   D +P+   YST++A C    A++ G+++HA T    ++    +SN LL MY KCG 
Sbjct: 78  LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGS 137

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV--------------------- 307
           + DA+ +F+ +  R++ SW  +I G+ + G  E+  +L                      
Sbjct: 138 LVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTH 197

Query: 308 -----------CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
                       + R +    N++T + ALA+ A++    +G   H  +I+  + L + V
Sbjct: 198 NQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVV 257

Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
            +A++D+Y   G + EA+    +M K    VSW   I   F + + EE    F  ++++ 
Sbjct: 258 WSALLDLYGKCGSLDEARGIFDQM-KDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSG 316

Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
              +E+T++ +L AC+   +    +++H  ++ + ++      S+L+  Y+KCG+   A 
Sbjct: 317 VRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVAR 376

Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           RVF+++   D+VSW S+I  Y+QNG+  +A+  FE ++  G +P   T++ VLSAC+H+G
Sbjct: 377 RVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAG 436

Query: 537 LVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
           LV  G + F S+ +++G++    HY+C++DLL R+G+ + A   I N+P+KP   +W  L
Sbjct: 437 LVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASL 496

Query: 597 FAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
              CR H +L++A+  +K + E++P++ A Y+TL+N+YA AGL ++    RK M    I 
Sbjct: 497 LGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIV 556

Query: 657 KEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DN 705
           K+PG SWIE+  +++ F   + SH +   ++E L +L ++I++ G+            + 
Sbjct: 557 KKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEE 616

Query: 706 EKEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           +KE  ++YHSE+LAV FG+IS P     +  + L
Sbjct: 617 QKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNL 650



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 214/465 (46%), Gaps = 46/465 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +++ C R   LELGRR HA    +      F++  L++MYAKCG +     +  +M + D
Sbjct: 93  LIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRD 152

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV--------------QP------------ 216
           + S N ++ GYAK    +QA   F ++   D               QP            
Sbjct: 153 LCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQR 212

Query: 217 ------NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
                 N +T S+ LA   ++  +  GK++H   ++ +      V +ALL +Y KCG ++
Sbjct: 213 HERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLD 272

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A  +F+ +  R+V+SWT +I+   + G  E+   L   + + G+ PNEYTF   L +CA
Sbjct: 273 EARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACA 332

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
                H+G   H  ++  G   G F  +A+V MYS  G    A++   EM +    VSW 
Sbjct: 333 DHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ-PDLVSWT 391

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVK 449
           + I G+ +N + +EA+  F  ++++    D+ TY  +L AC+    +    E  HS   K
Sbjct: 392 SLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEK 451

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGR----AR 504
                     + +I+   + G +++AE +   +    D   W S++     +G      R
Sbjct: 452 HGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKR 511

Query: 505 KAIILFEKMVVEGIRPTN-STFLAVLSACSHSGLVQDGQKVFESM 548
            A  L+E      I P N +T++ + +  +++GL  +   V + M
Sbjct: 512 AAKALYE------IEPENPATYITLANIYANAGLWSEVANVRKDM 550



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           + ++ +EA+E      R D       YS+++ AC    +L    ++H+    S F   V 
Sbjct: 67  QQKRVKEAVELLH---RTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVF 123

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           + + L++ Y KCGS  DA+ +F ++   D+ SWN+MI  Y++ GR  +A  LF++M
Sbjct: 124 ISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEM 179


>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 175/521 (33%), Positives = 289/521 (55%), Gaps = 5/521 (0%)

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           PY+ +   N ++ G++ ++        + +L    V P+ +T+  +L     L   +   
Sbjct: 67  PYIFLW--NTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPF 123

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q +A  +K        V N+L++ +  CG ++ +  +F    +++V+SWTA+ING  ++G
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNG 183

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVG 357
              + L     MR  G++ +E T    L + A LR+   G   H   ++ G  + D +VG
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG 243

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +A+VDMYS  G   +A K   EM  + + VSW A IAG+ +  + +EA++ F +M+    
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEM-PTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGI 302

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             ++ T +S L AC+ L SL     +H  + +SK   N  +G++L++ Y+KCG  ++A  
Sbjct: 303 EPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALL 362

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF +L A DV  W +MI   +  G A  ++ LF +M+   ++P   TFL VLSAC+H GL
Sbjct: 363 VFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGL 422

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V +G ++F  M+ +Y + P   HY CMVDLLGRAG+LE A+ FI ++P++PT  +W  LF
Sbjct: 423 VDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALF 482

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           + C  H   ++ E I   +++L P  +  Y+ L+N+Y+       A   R+LMK K + K
Sbjct: 483 SGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDK 542

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            PGCSWIEV   I+ F + +KSH+E   VY  L+ +  Q++
Sbjct: 543 SPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLK 583



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 190/378 (50%), Gaps = 6/378 (1%)

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F+ L    +  W  II GF      +  L     +R  G+ P+ +TF + L + + LRN
Sbjct: 60  LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
            +  + F+A ++K G+    FV  ++V  ++  G +  +++   E  K    VSW A I 
Sbjct: 120 EN-PFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKK-DVVSWTALIN 177

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFE 453
           G  RN +  EA+E F +M  +    DE T  S+L A ++L  +     +H   V+S +  
Sbjct: 178 GCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVI 237

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
            +V+VGS+L++ Y+KCG  +DA +VF+++   ++VSW ++I  Y Q  R ++A+ +F++M
Sbjct: 238 WDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           ++EGI P  ST  + L+AC+  G +  G+ + E + +    L  +   + +VD+  + G 
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG-TALVDMYSKCGC 356

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSD-LKMAEFISKQILELDPDDAAVYVTLSN 632
           ++ AL+    LP K   P W  +        D L      S+ I      +   ++ + +
Sbjct: 357 VDEALLVFEKLPAKDVYP-WTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLS 415

Query: 633 MYAEAGLQADAEEQRKLM 650
             A  GL  +  E  +LM
Sbjct: 416 ACAHGGLVDEGLELFRLM 433



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 196/442 (44%), Gaps = 39/442 (8%)

Query: 138 RYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNA 197
           +++A I K  +  D FV  SLV+ +A CG +     +  +    D+ S   L+ G  +N 
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNG 183

Query: 198 LFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL-QYLSKTAVS 256
              +A   F+++    V+ +  T  ++L     L  +  G+ +H   ++  + +    V 
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG 243

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           +AL+ MY KCG  +DA  VF  +  RN++SW A+I G+ Q   Y++ L++   M  +GI+
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIE 303

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           PN+ T T AL +CA L +   G   H  V +  + L   +GTA+VDMYS  G + EA   
Sbjct: 304 PNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLV 363

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
            +++  +     W A I G         ++  FSQM+R+    +  T+  +L AC+    
Sbjct: 364 FEKL-PAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA---- 418

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
                  H  +V    E    +   +I  Y                   +V  +  M+  
Sbjct: 419 -------HGGLVDEGLE----LFRLMICDYR---------------LEPNVDHYGCMVDL 452

Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
             + GR  +AI   E M +E   PT   + A+ S C      + G+ +   ++K   + P
Sbjct: 453 LGRAGRLEEAIKFIESMPME---PTPGVWGALFSGCMIHKAFELGEHIGNHLIK---LQP 506

Query: 557 EEA-HYSCMVDLLGRAGKLEIA 577
             +  Y  + +L  R  K E A
Sbjct: 507 HHSGRYILLANLYSRCQKWEAA 528



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 26/295 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKCGDIKSMVA 173
           +D+  ++ VL   +    +  GR  H    ++  V  D +V ++LV+MY+KCG     V 
Sbjct: 202 VDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  +MP  ++ S   L+AGY +   + +A   F ++    ++PN  T ++ L  C  L +
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           +D+G+ LH    + +    + +  AL+ MY KCG +++A  VFE L  ++V  WTA+ING
Sbjct: 322 LDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMING 381

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
               GD    L L   M    + PN  TF   L++CA           H  ++  G+ L 
Sbjct: 382 LAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA-----------HGGLVDEGLELF 430

Query: 354 -------------DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                        D  G  +VD+    G + EA K ++ M    +   W A  +G
Sbjct: 431 RLMICDYRLEPNVDHYG-CMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 185/633 (29%), Positives = 338/633 (53%), Gaps = 15/633 (2%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++  L+ C      +LG+  HA + K++    + +V  +L+ MY +CG +     +++QM
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D+ + N L+ GY +N ++ +A  FF  +     + +  + ++++A  G LS +  G 
Sbjct: 347 NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 406

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           +LHA  +K  + S   V N L+ MY KC +       F  +  +++ISWT +I G+ Q+ 
Sbjct: 407 ELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQND 466

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
            + + L L   + +  ++ +E      L + + L++  +    H  ++++G+ L   +  
Sbjct: 467 CHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQN 525

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
            +VD+Y     +  A +  + + K    VSW + I+    N    EA+E F +MV    +
Sbjct: 526 ELVDVYGKCRNMGYATRVFESI-KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D      IL A + L +L    +IH  +++  F     +  ++++ Y  CG  + A+ V
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F ++    ++ + SMI AY  +G  + A+ LF+KM  E + P + +FLA+L ACSH+GL+
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLL 704

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G+   + M  EY + P   HY C+VD+LGRA  +  A  F+  +  +PTA +W  L A
Sbjct: 705 DEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLA 764

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           ACR HS+ ++ E  ++++LEL+P +    V +SN++AE G   D E+ R  MK   + K 
Sbjct: 765 ACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH 824

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE-DIGHT-----------DNE 706
           PGCSWIE+  K+++F +++KSH E  ++YEKL ++ +++E ++G+            + E
Sbjct: 825 PGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGE 884

Query: 707 KEDRVLYHSERLAVGFGLISLPAKNKFECSRTL 739
           K   +  HSER+A+ +GL+  P +     ++ L
Sbjct: 885 KVQMLHGHSERIAIAYGLLRTPDRACLRITKNL 917



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 207/414 (50%), Gaps = 4/414 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGD-QFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           VL  C +   +  GR+ H+ I KT    +  F+   LV MY KCG +     V  +MP  
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
              + N ++  Y  N     A + +  +    V     ++  +L  C  L  I  G +LH
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQHGDY 300
           +  +KL Y S   + NAL++MY K   +  A  +F+G  ++ + + W +I++ +   G  
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTA 359
            + L L   M   G  PN YT   AL +C     + +G   HA V+K      + +V  A
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++ MY+  G++ +A++ L++M  +A  V+WN+ I G+ +N   +EA+E FS M+      
Sbjct: 326 LIAMYTRCGKMPQAERILRQM-NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           DE + +SI+ A   L +L    ++H+ ++K  ++SN+ VG++LI+ Y+KC       R F
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            ++   D++SW ++I  Y+QN    +A+ LF  +  + +        ++L A S
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 181/359 (50%), Gaps = 3/359 (0%)

Query: 195 KNALFDQAFS-FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK-LQYLSK 252
           K A FD   +  F +LD  +       ++ +L +CG   A+ +G+QLH++  K       
Sbjct: 56  KLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFEL 115

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
             ++  L+ MY KCG ++DAE VF+ +  R   +W  +I  +  +G+    L L   MR 
Sbjct: 116 DFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRV 175

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
           +G+     +F   L +CA LR+   G   H+ ++K G     F+  A+V MY+   ++  
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           A++      +   +V WN+ ++ +  + K+ E +E F +M     A + +T  S L AC 
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295

Query: 433 LLPSLATCEQIHSRIVKSKFESN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
                   ++IH+ ++KS   S+ ++V ++LI  Y +CG    AER+  Q+  ADVV+WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
           S+IK Y QN   ++A+  F  M+  G +    +  ++++A      +  G ++   ++K
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 150/317 (47%), Gaps = 2/317 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  +++   R   L  G   HA + K     +  V  +L++MY+KC     M    
Sbjct: 385 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 444

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +M   D+ S   ++AGYA+N    +A   F  +    ++ +     ++L     L ++ 
Sbjct: 445 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 504

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
             K++H   ++ + L  T + N L+ +Y KC  M  A  VFE +  ++V+SWT++I+   
Sbjct: 505 IVKEIHCHILR-KGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G+  + + L   M E G+  +       L++ ASL   + G   H  ++++G  L   
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           +  A+VDMY+  G++  AK     + +    + + + I  +  +   + A+E F +M   
Sbjct: 624 IAVAVVDMYACCGDLQSAKAVFDRIERKG-LLQYTSMINAYGMHGCGKAAVELFDKMRHE 682

Query: 416 DAACDEFTYSSILKACS 432
           + + D  ++ ++L ACS
Sbjct: 683 NVSPDHISFLALLYACS 699



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 3/255 (1%)

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALG-DFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           F   L  C   R    G   H+++ K   +   DF+   +V MY   G + +A+K   EM
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
               ++ +WN  I  +  N +   A+  +  M          ++ ++LKAC+ L  + + 
Sbjct: 143 -PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQ 499
            ++HS +VK  + S   + ++L+  Y K      A R+F       D V WNS++ +YS 
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G++ + + LF +M + G  P + T ++ L+AC      + G+++  S++K      E  
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321

Query: 560 HYSCMVDLLGRAGKL 574
             + ++ +  R GK+
Sbjct: 322 VCNALIAMYTRCGKM 336


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 177/578 (30%), Positives = 313/578 (54%), Gaps = 4/578 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
             LG++ H++I K     + +  ++L++MYAKC  ++        +   +  S N ++ G
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           YA+    + AF     ++    + +  TY+ +L +       +   QLH + +K      
Sbjct: 175 YAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELV 234

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
             + NAL+T Y KCG ++DA+ +F+     R++++W +++  +      +   +L+  M+
Sbjct: 235 NTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQ 294

Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY--SGLGE 369
           E G +P+ Y++T  +++C +   S+ G   H  VIKRG      +  A++ MY  S  G 
Sbjct: 295 EHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGS 354

Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
           + EA    + + +    VSWN+ + G  +   +E+A+++F  M       D +++S++L+
Sbjct: 355 MKEALCIFESL-EFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLR 413

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           +CS L +    +QIH   +K   ESN  V SSLI  Y+KCG  EDA R F + +    ++
Sbjct: 414 SCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSIT 473

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+++  Y+Q+G+   A+ LF  M  + ++  + TF+AVL+ACSH GLV+ G K    M 
Sbjct: 474 WNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCME 533

Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
            +YG+ P   HY+C VDL GR+G+LE A   I  +P KP   +W+    ACR   ++++A
Sbjct: 534 SDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELA 593

Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
             ++  +LE++P++   YV LSNMY       +  + ++LMK + + K PG SWIEV N 
Sbjct: 594 CQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNN 653

Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
           ++ F +Q+ SH    ++Y  L+ L+++I  +   D  K
Sbjct: 654 VHAFIAQDHSHPSCQQIYFLLEVLLEEITRMEDADGFK 691



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 209/442 (47%), Gaps = 7/442 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H+L  K     D +   +++N Y KC +++S   +  +MP  D  S N ++AG+      
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
           + ++     +     + + YT+ +ML           G+Q+H+  +K+ Y       +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG--IDP 317
           L MY KC  +EDA   F  + + N +SW A+ING+ Q GD E    L+  M ++G  +D 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
             Y   + L   A   N  +    H ++IK G+ L + +  A++  YS  G + +AK+  
Sbjct: 201 GTYAPLLPLLDDADFCN--LTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
                    V+WN+ +A +    + + A +    M  +    D ++Y+SI+ AC      
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC--GSWEDAERVFSQLTAADVVSWNSMIK 495
                +H  ++K  FE +V + ++LI  Y K   GS ++A  +F  L   D VSWNS++ 
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
             SQ G +  A+  F  M    +   + +F AVL +CS     Q GQ++   +  +YG+ 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYGLE 437

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
             E   S ++ +  + G +E A
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDA 459



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 13/275 (4%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC--GDIKSMVAVVKQMPY 180
           ++S C  E     GR  H L+ K        ++ +L++MY K   G +K  + + + + +
Sbjct: 308 IISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEF 367

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D  S N +L G ++    + A   FL +    +  +HY++S +L  C  L+    G+Q+
Sbjct: 368 KDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQI 427

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +K    S   VS++L+ MY KCG++EDA   FE   + + I+W A++ G+ QHG  
Sbjct: 428 HVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQC 487

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
              L L  LM E  +  +  TF   L +C     SH+G +       R M     V   +
Sbjct: 488 NVALDLFFLMEEKKVKMDHITFVAVLTAC-----SHIGLVEQGCKFLRCMESDYGVPPRM 542

Query: 361 ------VDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
                 VD+Y   G + EAK  ++EM     +  W
Sbjct: 543 EHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVW 577



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS     +LG++ H L  K  +  ++FV++SL+ MY+KCG I+      ++     
Sbjct: 411 VLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNS 470

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             + N L+ GYA++   + A   F  ++   V+ +H T+  +L  C  +  +++G +   
Sbjct: 471 SITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKF-L 529

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
           + M+  Y     + +    + +Y + G +E+A+++ E +  + +   W   +   +  G+
Sbjct: 530 RCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGN 589

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            E   ++   + E  ++P E+   V L++
Sbjct: 590 IELACQVAGHLLE--MEPEEHCTYVLLSN 616


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 181/540 (33%), Positives = 285/540 (52%), Gaps = 2/540 (0%)

Query: 129 REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           R      GRR H    K A   D FV   LV+MYAK GD+++   V  ++   ++ S   
Sbjct: 135 RSADFRYGRRLHCNAVK-AGGADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTS 193

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           +L+G  +N   ++  + F ++    V P+ YT +++L  C  L ++ +G+ +H   +K  
Sbjct: 194 MLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHG 253

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            +    ++ A+L MY+KCG +EDA  +F+ L   +++ WT +I G+ Q+G     L L  
Sbjct: 254 MVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFS 313

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
             +   I PN  T    L++ A LRN  +G + HA  +K  +   D V  A+VDMY+   
Sbjct: 314 DKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCK 373

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
            + EA      +  +   V+WN+ IAG+  N    EA+  FSQM    ++ D  +  + L
Sbjct: 374 ALSEANGIFGRI-SNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNAL 432

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC  L  L   +  H+  VK  F SNV+V ++L+  YNKC     A+RVFS+++  + V
Sbjct: 433 SACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSV 492

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +W +MI  Y   G +  +I L  KM+ + I+P    F ++LS CSH+G+V  G+  F+SM
Sbjct: 493 TWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSM 552

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
            + + I P   HY+CMVD+L RAG LE AL FI  +P+     IW      C+ HS L+ 
Sbjct: 553 AQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEF 612

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
            E    +++ L PD    YV +SN+Y   G    +   R+LM+ + + K PGCS + + N
Sbjct: 613 GEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSVGLEN 672



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/447 (22%), Positives = 215/447 (48%), Gaps = 6/447 (1%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E +L  ++ +  VL  C+    L  GR  H  + K  +  + F+TA++++MY KCG+++ 
Sbjct: 217 ERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVED 276

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
              +  ++ ++D+     ++ GY +N     A   F     + + PN  T +T+L+    
Sbjct: 277 ARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQ 336

Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
           L  +  G+ +HA ++KL  +    V NAL+ MY KC  + +A  +F  +  ++V++W ++
Sbjct: 337 LRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSL 396

Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
           I G+ ++    + L L   MR  G  P+  +   AL++C  L +  +G  FH   +KR  
Sbjct: 397 IAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAF 456

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
               +V TA++++Y+   ++  A++   EM +  +SV+W A I G+     +  +I+  +
Sbjct: 457 LSNVYVNTALLNLYNKCADLPSAQRVFSEMSER-NSVTWGAMIGGYGMQGDSAGSIDLLN 515

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKC 469
           +M++++   +E  ++SIL  CS    ++  +     + +      ++   + +++   + 
Sbjct: 516 KMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARA 575

Query: 470 GSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           G+ E+A     ++   AD+  W + +     + R         +M+V  + P    F  +
Sbjct: 576 GNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMV--LHPDKPDFYVL 633

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGIL 555
           +S    S    D       +++E G++
Sbjct: 634 MSNLYTSYGRWDKSLAIRRLMQERGLV 660



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 18/259 (6%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +CA+L +       HA+++  G+       T ++  Y+ LG++  A++ L E  +   
Sbjct: 30  LPACATLPSLRA---LHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDP 86

Query: 386 -----SVSWNAQIAGFFRNQKTEEAIEAFSQMVRN--DAACDEFTYSSILKACSLLPSLA 438
                ++ W+A  AG     +  +A+     M R   +A  D    S  LKA        
Sbjct: 87  YTYRVALGWHAA-AG-----RHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFR 140

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              ++H   VK+   ++  V + L++ Y K G  E+A +VF ++   +VVSW SM+    
Sbjct: 141 YGRRLHCNAVKAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCL 199

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           QNG A + + LF +M  E + P+  T  +VL AC+  G +  G+ V  S++K +G++   
Sbjct: 200 QNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIK-HGMVFNP 258

Query: 559 AHYSCMVDLLGRAGKLEIA 577
              + ++D+  + G++E A
Sbjct: 259 FITAAVLDMYVKCGEVEDA 277


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 291/546 (53%), Gaps = 3/546 (0%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ V+  C  E+  + G   HAL  K  +     +  +LV+MY K GD+++ + V   M 
Sbjct: 223 LVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGML 282

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             +  S N  +  +     +      F K+   +V P   T S++L     L + D G++
Sbjct: 283 EQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGRE 342

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +H  ++K        V+N+L+ MY K G +E A ++FE +  RNV+SW A+I    Q+G 
Sbjct: 343 VHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGA 402

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             +  RLV  M++ G  PN  T    L +CA + +  MG   HA  I+RG+    F+  A
Sbjct: 403 ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNA 462

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMYS  G++  A+   +   K    VS+N  I G+ ++    E++  F QM       
Sbjct: 463 LIDMYSKCGQLSLARNIFERSEK--DDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 520

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D  ++   L AC+ L      ++IH  +V+     +  + +SL++ Y K G    A ++F
Sbjct: 521 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 580

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
           +++T  DV SWN+MI  Y  +G+   A  LFE M  +G+   + +++AVL+ACSH GLV 
Sbjct: 581 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 640

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
            G+K F  MV +  I P++ HY+CMVDLLGRAG+L      I ++P    + +W  L  A
Sbjct: 641 KGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGA 699

Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
           CR H ++++A++ ++ + EL P+ +  Y  + NMYAE G   +A + RKLMK +++ K P
Sbjct: 700 CRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNP 759

Query: 660 GCSWIE 665
             SW++
Sbjct: 760 AYSWVQ 765



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 2/343 (0%)

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
           D+G +LHA  ++  +L+     N L+  Y  CG   DA  VF+ + +R+V+SW ++++ F
Sbjct: 136 DKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAF 195

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +G +    R +  M   G   N  +    + +C + +    G   HA  +K G+    
Sbjct: 196 LVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMV 255

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
            +  A+VDMY   G++ EA  Q+ +     + VSWN+ I  F       + +  F +M  
Sbjct: 256 NLANALVDMYGKFGDV-EASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSE 314

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           ++      T SS+L A   L S     ++H   +K   + ++ V +SL++ Y K GS E 
Sbjct: 315 HNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEK 374

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +F Q+   +VVSWN+MI    QNG   +A  L   M   G  P + T + VL AC+ 
Sbjct: 375 ASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACAR 434

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
              ++ G+++    ++  G++ +    + ++D+  + G+L +A
Sbjct: 435 MASLKMGKQIHAWSIRR-GLMFDLFISNALIDMYSKCGQLSLA 476


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 175/528 (33%), Positives = 293/528 (55%), Gaps = 17/528 (3%)

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
           + +QP+++T+  ++  C  L   + G ++H   +K  Y S+  +SN+L+TMY KC   E 
Sbjct: 4   LGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYEL 63

Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
           +  VF+ +  +N +SW+AII    Q    ++   L   M  +G  P+      A+A   S
Sbjct: 64  SRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRS 123

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
              +   Y     V++ G+     V +A   M++  G + E  ++L +   S   V+W  
Sbjct: 124 HEEADDVYRV---VVENGLDFDQSVQSAAAGMFARCGRV-EVARKLFDGIMSKDLVTWAT 179

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            I  + +     EA+    QM+      D  T   +++ACS L S      +H  I    
Sbjct: 180 TIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGF 239

Query: 452 FESNV-HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
           F + +  V ++LI+ Y KCGS   A +VF  +   ++++W++MI  Y  +G  R+A+ LF
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           ++M    ++P + TF+++LSACSHSGLV +G + F SM +++G+ P   HY+CMVD+LGR
Sbjct: 300 DQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTL 630
           AGKL+ A  FI  +P++P A +W  L  ACR H ++ +AE +++ + +LDP +A  YV L
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVIL 418

Query: 631 SNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
            N+Y   G + +A+  R LMK + + K  G S IE+ NK+Y F + ++SH +   +Y +L
Sbjct: 419 YNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSEL 478

Query: 691 KQLMQQIEDIGHT----------DNEKEDRVLY-HSERLAVGFGLISL 727
           ++LM +I   G+T          D E ++ +LY HSE+LA+ FGL++L
Sbjct: 479 ERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNL 526



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 175/412 (42%), Gaps = 41/412 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  CS     E G R H  + K       F++ SL+ MY KC   +    V  +MP  +
Sbjct: 16  IIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMPDKN 75

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S + ++    ++    + FS F ++     +P+      +L     + + +E   ++ 
Sbjct: 76  AVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVRSHEEADDVYR 132

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             ++       +V +A   M+ +CG +E A  +F+G++ +++++W   I  + +     +
Sbjct: 133 VVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLE 192

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF--VGTAI 360
            L L+  M   GI P+  T    + +C++L +  + ++ H  +I  G        V TA+
Sbjct: 193 ALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGFFYNQLLAVETAL 251

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +D+Y   G +  A+K    M +  + ++W+A I+G+  +    EA+  F QM +     D
Sbjct: 252 IDLYVKCGSLTYARKVFDGM-QERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPD 309

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T+ SIL ACS           HS +V   +E                  +    R F 
Sbjct: 310 HITFVSILSACS-----------HSGLVAEGWE-----------------CFNSMARDFG 341

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
                +   +  M+    + G+  +A    E+M V   RP  + + A+L AC
Sbjct: 342 VTPRPE--HYACMVDILGRAGKLDEACDFIERMPV---RPNAAVWGALLGAC 388



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M+R     D FT+  I+KACS L       +IH  +VK  ++S V + +SLI  Y KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           +E + +VF ++   + VSW+++I A  Q+ R ++   LF +M+ EG RP+    L  + A
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAM-A 119

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           C  S   ++   V+  +V E G+  +++  S    +  R G++E+A
Sbjct: 120 CVRSH--EEADDVYRVVV-ENGLDFDQSVQSAAAGMFARCGRVEVA 162


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 187/568 (32%), Positives = 309/568 (54%), Gaps = 27/568 (4%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           D+ S N ++A  A++    +A   F  +  + + P   ++   +  C SL  I  GKQ H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
            Q     Y S   VS+AL+ MY  CG +EDA  VF+ + +RN++SWT++I G+  +G+  
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN-- 157

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALAS---------CASLRNSHMGYMFHAQVIKRGMAL 352
             L  V L ++  I+ N+   T+ L S         C+ +    +    H+ VIKRG   
Sbjct: 158 -ALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDR 216

Query: 353 GDFVGTAIVDMYS--GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
           G  VG  ++D Y+  G G +  A+K   ++      VS+N+ ++ + ++  + EA + F 
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNEAFDVFR 275

Query: 411 QMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           ++++      +  T S++L A S   +L   + IH ++++   E +V VG+S+I+ Y KC
Sbjct: 276 RLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           G  E A   F ++   +V SW +MI  Y  +G A KA+ LF  M+  G+RP   TF++VL
Sbjct: 336 GRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
           +ACSH+GL   G   F +M   +G+ P   HY CMVDLLGRAG L+ A   I  + ++P 
Sbjct: 396 AACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPD 455

Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
           + IW  L AACR H ++++AE    ++ ELDP +   Y+ LS++YA++G   D E  R  
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMT 515

Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
           MK + + K PG S +E+  +++ F   ++ H +  K+YE L +L +++ + G+  N    
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575

Query: 706 -------EKEDRVLYHSERLAVGFGLIS 726
                  EKE  +  HSE+LA+ FG+++
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMN 603



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 168/361 (46%), Gaps = 29/361 (8%)

Query: 46  YSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS-FPDGFID 97
           YS C       ++F++ PKR  +S + +I         +G   NG +    S F D  I+
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMI---------RGYDLNGNALDAVSLFKDLLIE 171

Query: 98  DGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
           +   N    T +     LD   ++ V+S CSR     L    H+ + K        V  +
Sbjct: 172 E---NDDDATMF-----LDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNT 223

Query: 158 LVNMYAKCGDIKSMVA--VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQ 215
           L++ YAK G+    VA  +  Q+   D  S N +++ YA++ + ++AF  F +L    V 
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVV 283

Query: 216 P-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
             N  T ST+L       A+  GK +H Q +++       V  +++ MY KCG +E A  
Sbjct: 284 TFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARL 343

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
            F+ +  +NV SWTA+I G+  HG   K L L   M + G+ PN  TF   LA+C+    
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403

Query: 335 SHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
             +G+  F+A   + G+  G      +VD+    G + +A   +++M     S+ W++ +
Sbjct: 404 HDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLL 463

Query: 394 A 394
           A
Sbjct: 464 A 464



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 193/420 (45%), Gaps = 22/420 (5%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL- 209
           D FV+++L+ MY+ CG ++    V  ++P  +I S   ++ GY  N     A S F  L 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 210 -----DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
                D   +  +     ++++ C  ++A    + +H+  +K  +    +V N LL  Y 
Sbjct: 170 IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 265 KCGM--MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
           K G   +  A  +F+ +V ++ +S+ +I++ + Q G   +   +   L++E  +  N  T
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCIT 289

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
            +  L + +      +G   H QVI+ G+     VGT+I+DMY   G +  A+     M 
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRM- 348

Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
           K+ +  SW A IAG+  +    +A+E F  M+ +    +  T+ S+L ACS    L    
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS-HAGLHDVG 407

Query: 442 QIHSRIVKSKF--ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYS 498
                 +K +F  E  +     +++   + G  + A  +  ++    D + W+S++ A  
Sbjct: 408 WHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAAC- 466

Query: 499 QNGRARKAIILFEKMVVE--GIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGIL 555
              R  K + L E  V     + P+N  +  +LS   + SG  +D ++V  +M K  G++
Sbjct: 467 ---RIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRMTM-KNRGLV 522



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/208 (20%), Positives = 97/208 (46%), Gaps = 6/208 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL   S    L +G+  H  + +  +  D  V  S+++MY KCG +++      +M   +
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKN 352

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S   ++AGY  +    +A   F  +    V+PN+ T+ ++LA C      D G     
Sbjct: 353 VRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWF- 411

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHGD 299
             MK ++  +  + +   ++ +  + G ++ A  + + + ++ + I W++++   + H +
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKN 471

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALA 327
            E  L  + + R   +DP+   + + L+
Sbjct: 472 VE--LAEISVARLFELDPSNCGYYMLLS 497


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 195/628 (31%), Positives = 319/628 (50%), Gaps = 16/628 (2%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITK-TAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           D Q +              LGR  HA   +  A     F+ A LVN+Y+K     +  A 
Sbjct: 14  DPQLLAAAFESAIASRSPRLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAA 73

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           +   P+  + S    ++G A++     A S F  +  + ++PN +T+ +      S    
Sbjct: 74  LASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPR 133

Query: 235 DE-GKQLHAQTMKLQYLS-KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
              G Q+H+  ++  YL     VS A L MY K G ++ A  +F  +  RNV++W A++ 
Sbjct: 134 STIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMT 193

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
                G   + +     +RE G  PN  +      +CA      +G  FH  V+K G  +
Sbjct: 194 NAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEM 253

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
              V  ++VD Y       +A+     MG   +SVSW + +A + +N   EEA  A+   
Sbjct: 254 DVSVLNSMVDFYGKCRCAGKARAVFDGMGVR-NSVSWCSMVAAYAQNGAEEEAFAAYLGA 312

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
            R+     +F  SS L  C+ L  L     +H+  V+S  ++N+ V S+L++ Y KCG  
Sbjct: 313 RRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCV 372

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSA 531
           EDAE++F +    ++V+WN+MI  Y+  G A+ A+++F+ M+  G   P   T + V+++
Sbjct: 373 EDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITS 432

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
           CS  GL +DG ++FE+M + +GI P   HY+C+VDLLGRAG  E A   I  +P++P+  
Sbjct: 433 CSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSIS 492

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           +W  L  AC+ H   ++    ++++ ELDP D+  +V LSNM+A AG  A+A + RK MK
Sbjct: 493 VWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMK 552

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK---- 707
              I K+PGCSW+   N ++ F +++  H    ++   L +L +Q++  G+  + +    
Sbjct: 553 NVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLY 612

Query: 708 -------EDRVLYHSERLAVGFGLISLP 728
                  E  V  HSE+LA+ FGLI +P
Sbjct: 613 DLEEEEKESEVFQHSEKLALAFGLICIP 640


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 173/599 (28%), Positives = 303/599 (50%), Gaps = 51/599 (8%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           D  +    +N   K G +   + +  +MP  ++ +   +++G  +N   + A + F  + 
Sbjct: 47  DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
              V PN +  +  L  C  L A+  G+Q+H+  ++  +     + + L+ MY +CG + 
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A+ VF+ +   +V+ +T++I+ F ++G++E     +  M + G+ PNE+T T  L +C 
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226

Query: 331 SL-------------------------------RNS-------------------HMGYM 340
            +                               RN                     +G  
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQ 286

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H   IK  +     V  A++ MY   G + E +  L ++ ++   VSW   I+  F+N 
Sbjct: 287 LHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKI-ENPDLVSWTTAISANFQNG 345

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             E+AI    QM       + + +SS+L +C+ + SL    Q H   +K   +S +  G+
Sbjct: 346 FGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGN 405

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +LI  Y+KCG    A   F  +   DV SWNS+I  ++Q+G A KA+ +F KM   GI+P
Sbjct: 406 ALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKP 465

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            +STFL VL  C+HSG+V++G+  F  M+ +Y   P  +HY+CM+D+LGR G+ + AL  
Sbjct: 466 DDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRM 525

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I+++P +P A IW+ L A+C+ H +L + +  + +++EL   D+A YV +SN+YA  G  
Sbjct: 526 INDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEW 585

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
            DA + R+ M    + K+ GCSWIE+ N+++ F S++ SH     +Y+ L +L+  ++D
Sbjct: 586 EDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 644



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 189/425 (44%), Gaps = 53/425 (12%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L  G + H+L  +    GD ++ + L+ MY++CG + +   V  +M   D+
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC--------------- 228
                L++ + +N  F+ A    +++    ++PN +T +T+L  C               
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKK 240

Query: 229 -----------------------------------GSLSAIDEGKQLHAQTMKLQYLSKT 253
                                              G+  +I  G+QLH   +K   ++  
Sbjct: 241 IGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDI 300

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            VSNALL+MY + G++E+ E++   +   +++SWT  I+   Q+G  EK + L+C M  +
Sbjct: 301 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 360

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  PN Y F+  L+SCA + +   G  FH   +K G       G A+++MYS  G++  A
Sbjct: 361 GFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSA 420

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +     M  +    SWN+ I G  ++    +A+E FS+M  N    D+ T+  +L  C+ 
Sbjct: 421 RLAFDVM-HTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNH 479

Query: 434 LPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWN 491
              +   E     ++    F       + +I+   + G +++A R+ + +    D + W 
Sbjct: 480 SGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWK 539

Query: 492 SMIKA 496
           +++ +
Sbjct: 540 TLLAS 544



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 228/530 (43%), Gaps = 71/530 (13%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++NV++WT++++G  ++G  E  L +   M E G+ PN+
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +    AL +CA L     G   H+  ++ G A   ++G+ +++MYS  G +  AK+    
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC-------- 431
           M  S   V + + I+ F RN + E A EA  QM++     +E T ++IL AC        
Sbjct: 175 M-DSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQI 233

Query: 432 ------------------------------------SLLPSLATC------EQIHSRIVK 449
                                               +L   L  C       Q+H   +K
Sbjct: 234 HGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIK 293

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIIL 509
               +++ V ++L+  Y + G  E+ E + +++   D+VSW + I A  QNG   KAI L
Sbjct: 294 HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 353

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
             +M  EG  P    F +VLS+C+    +  G + F  +  + G   E    + ++++  
Sbjct: 354 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYS 412

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQILE-LDPDDAAVY 627
           + G++  A +    +        W  L      H D   A E  SK     + PDD+   
Sbjct: 413 KCGQMGSARLAFDVMHTHDVTS-WNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 471

Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS----WIEVYNKIYRFFSQNKSHSEM 683
             L      +G+  + E   +LM + + S  P  S     I++  +  RF    +  ++M
Sbjct: 472 GVLMGCN-HSGMVEEGELFFRLM-IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM 529

Query: 684 PKVYEKL--KQLMQQIE-----DIGHTDNEKEDRVLYHSERLAVGFGLIS 726
           P   + L  K L+   +     DIG       DR++  S+R +  + L+S
Sbjct: 530 PFEPDALIWKTLLASCKLHRNLDIGKL---AADRLMELSDRDSASYVLMS 576



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 179/390 (45%), Gaps = 42/390 (10%)

Query: 101 SNTVPVTCYSLESLLD-KQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASL 158
           S+T  +  YS    +D  +F +  VL  C     + LGR+ H    K  +  D  V+ +L
Sbjct: 250 SSTALIDFYSRNEGVDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNAL 306

Query: 159 VNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
           ++MY + G ++ + A++ ++   D+ S    ++   +N   ++A +   ++      PN 
Sbjct: 307 LSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNG 366

Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
           Y +S++L+ C  ++++D+G Q H   +KL   S+    NAL+ MY KCG M  A   F+ 
Sbjct: 367 YAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDV 426

Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
           +   +V SW ++I+G  QHGD  K L +   MR +GI P++ TF   L  C     +H G
Sbjct: 427 MHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC-----NHSG 481

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
            +   ++  R M          +D YS                 + +   +   I    R
Sbjct: 482 MVEEGELFFRLM----------IDQYS----------------FTPAPSHYACMIDMLGR 515

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVH 457
           N + +EA+   + M       D   + ++L +C L  +L   +    R+++ S  +S  +
Sbjct: 516 NGRFDEALRMINDMPFEP---DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASY 572

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADV 487
           V  S I A +  G WEDA +V  ++    V
Sbjct: 573 VLMSNIYAMH--GEWEDARKVRRRMDETGV 600


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 192/615 (31%), Positives = 323/615 (52%), Gaps = 47/615 (7%)

Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
           F   S++  + +   I     V  ++ + D+     ++ GYA+N  FD A   F ++   
Sbjct: 12  FSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVK 71

Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL------------ 260
           DV     ++++M+  C   + +   ++L  +  +   +S T + N  L            
Sbjct: 72  DV----VSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLF 127

Query: 261 -------------TMYIKC--GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
                         +Y  C  G +ED   +F+ +  RNVISWT++I G  QHG  E+ L 
Sbjct: 128 YKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALG 187

Query: 306 LVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDM 363
           L   M   G++  P   T+   + +CA+    + G   HA V K G +   ++  A++  
Sbjct: 188 LFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITF 247

Query: 364 YSGLGEIWEAKKQLKEMGK-SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           Y+   ++ ++ +     GK   + V W A + G+  N K E+A++ F +M+R     ++ 
Sbjct: 248 YANCKQMEDSLRVFH--GKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQS 305

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           +++S L +C  L +L    +IH+  VK   E++V VG+SLI  Y +CG+  D   +F ++
Sbjct: 306 SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI 365

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
           +  ++VSWNS+I   +Q+G    A+  F +MV   + P   TF  +LSACSHSG+ Q G+
Sbjct: 366 SKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGR 425

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
            +F+   +      +  HY+CMVD+LGR+GKLE A   I N+P+K  + +W  L +AC  
Sbjct: 426 CLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTM 485

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           HS L++AE  +K I++L+P  ++ YV LSN+YA A   +D    R+ MK + I+K+PG S
Sbjct: 486 HSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRS 545

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WI +      F S ++SH    ++Y+KL+ L  +++++G+            D +KE  +
Sbjct: 546 WITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVML 605

Query: 712 LYHSERLAVGFGLIS 726
            YHSERLA+GFGLIS
Sbjct: 606 SYHSERLAIGFGLIS 620



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 5/300 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    L  G + HA + K     D +++A+L+  YA C  ++  + V     +++
Sbjct: 209 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 268

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +     L+ GY  N   + A   F ++    V PN  ++++ L  C  L A+D G+++H 
Sbjct: 269 VVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHT 328

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   +   V N+L+ MY +CG + D   +F+ + ++N++SW ++I G  QHG    
Sbjct: 329 AAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMW 388

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG---YMFHAQVIKRGMALGDFVGTA 359
            L     M    ++P+E TFT  L++C+    S  G   + + ++     + L  +    
Sbjct: 389 ALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--AC 446

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VD+    G++ EA++ ++ M   A+S+ W   ++    + K E A  A   ++  +  C
Sbjct: 447 MVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHC 506


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 184/572 (32%), Positives = 320/572 (55%), Gaps = 8/572 (1%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
            +LG + H L+ K     + +V +SLV+MYAKC  ++      K++   +  S N L+AG
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176

Query: 193 YAKNALFDQAFSFFLKLDGID--VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
           + +      AF + L L  +   V  +  T++ +L +       +  KQ+HA+ +KL   
Sbjct: 177 FVQVRDIKTAF-WLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 235

Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLV-QRNVISWTAIINGFKQHGDYEKPLRLVCL 309
            +  + NA+++ Y  CG + DA+ VF+GL   +++ISW ++I GF +H   E    L   
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL-- 367
           M+   ++ + YT+T  L++C+   +   G   H  VIK+G+        A++ MY     
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355

Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSI 427
           G + E    L E  KS   +SWN+ I GF +   +E+A++ FS +  ++   D++ +S++
Sbjct: 356 GTM-EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414

Query: 428 LKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA-D 486
           L++CS L +L   +QIH+   KS F SN  V SSLI  Y+KCG  E A + F Q+++   
Sbjct: 415 LRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHS 474

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFE 546
            V+WN+MI  Y+Q+G  + ++ LF +M  + ++  + TF A+L+ACSH+GL+Q+G ++  
Sbjct: 475 TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 534

Query: 547 SMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
            M   Y I P   HY+  VDLLGRAG +  A   I ++P+ P   + +     CR   ++
Sbjct: 535 LMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEI 594

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           +MA  ++  +LE++P+D   YV+LS+MY++     +    +K+MK + + K PG SWIE+
Sbjct: 595 EMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEI 654

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
            N++  F ++++S+     +Y  +K L Q+++
Sbjct: 655 RNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 8/469 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H    K     D +V+  +++ Y K G +     +  +MP  D  S N +++GY      
Sbjct: 23  HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82

Query: 200 DQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
           + A+  F  +K  G DV  + Y++S +L    S+   D G+Q+H   +K  Y     V +
Sbjct: 83  EDAWCLFTCMKRSGSDV--DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140

Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR-EDGID 316
           +L+ MY KC  +EDA   F+ + + N +SW A+I GF Q  D +    L+ LM  +  + 
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
            +  TF   L         ++    HA+V+K G+     +  A++  Y+  G + +AK+ 
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
              +G S   +SWN+ IAGF +++  E A E F QM R+    D +TY+ +L ACS    
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320

Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNK--CGSWEDAERVFSQLTAADVVSWNSMI 494
               + +H  ++K   E      ++LI  Y +   G+ EDA  +F  L + D++SWNS+I
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380

Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
             ++Q G +  A+  F  +    I+  +  F A+L +CS    +Q GQ++  ++  + G 
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGF 439

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCH 603
           +  E   S ++ +  + G +E A      +  K +   W  +      H
Sbjct: 440 VSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 119/233 (51%), Gaps = 14/233 (6%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK--CGDIKSMVAVVKQMPY 180
           +LS CS EE    G+  H ++ K  +      T +L++MY +   G ++  +++ + +  
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S N ++ G+A+  L + A  FF  L   +++ + Y +S +L  C  L+ +  G+Q+
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN-VISWTAIINGFKQHGD 299
           HA   K  ++S   V ++L+ MY KCG++E A   F+ +  ++  ++W A+I G+ QHG 
Sbjct: 431 HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGL 490

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            +  L L   M    +  +  TFT  L +C+           H  +I+ G+ L
Sbjct: 491 GQVSLDLFSQMCNQNVKLDHVTFTAILTACS-----------HTGLIQEGLEL 532



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 4/156 (2%)

Query: 89  DSFPDGFIDDGCS-NTVPVTCY--SLESLLDKQFVIEVLSYCSREECLELGRRYHALITK 145
           +S   GF   G S + V    Y  S E  +D      +L  CS    L+LG++ HAL TK
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436

Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-DIASCNCLLAGYAKNALFDQAFS 204
           +    ++FV +SL+ MY+KCG I+S     +Q+       + N ++ GYA++ L   +  
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLD 496

Query: 205 FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            F ++   +V+ +H T++ +L  C     I EG +L
Sbjct: 497 LFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 180/545 (33%), Positives = 288/545 (52%), Gaps = 4/545 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  CS     + GR+ H  I K     D FV   LV+MYAKC +++    V  ++   +
Sbjct: 144 VLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRN 202

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +     ++ GY +N    +    F ++    V+ N YT  +++  C  L A+ +GK +H 
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  +   + +   LL +Y KCG + DA SVF+ L   +++SWTA+I G+ Q G   +
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L+L    R   + PN  T +  L++CA   + +MG   H   IK G     F   A+VD
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDATF-ENALVD 381

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+    I +A+    E       ++WN+ I+G+ +N    EA+E F QM  +    D  
Sbjct: 382 MYAKCHMIGDARYVF-ETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAI 440

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQ 481
           T  S+L AC+ + +      +H   +K+   S +V+VG++L+  Y KCG  E A  +F +
Sbjct: 441 TLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDE 500

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           +   + ++W++MI  Y   G   +++ LF  M+ E + P    F  +LSACSHSG++ +G
Sbjct: 501 MGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEG 560

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
            + F +M + Y  +P   HY+CMVDLL RAG+LE AL FI  +PI+P   +       CR
Sbjct: 561 WRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCR 620

Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
            HS   + E   +++LEL PD A  YV +SN+YA  G  + A +  +LMK + ++K PG 
Sbjct: 621 LHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGW 680

Query: 662 SWIEV 666
           S +++
Sbjct: 681 SLVDI 685



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 248/511 (48%), Gaps = 10/511 (1%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HAL+    +  D      LV++Y   G ++    +  ++   D+ S   ++  Y  N
Sbjct: 56  RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLN 115

Query: 197 ALFDQAFSFF-LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
             + +   F+  +L     + ++  +S +L  C  L   DEG++LH Q +K+     + V
Sbjct: 116 DSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGS-PDSFV 174

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
              L+ MY KC  +ED+  VF+ ++ RNV+ WT++I G+ Q+   ++ L L   MRE  +
Sbjct: 175 LTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLV 234

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N+YT    + +C  L   H G   H  VIK G  L  F+ T ++D+Y   G+I +A  
Sbjct: 235 EGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFS 294

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
              E+  +   VSW A I G+ +     EA++ F+     D   +  T SS+L AC+   
Sbjct: 295 VFDEL-STIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTG 353

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
           SL     +H   +K   E +    ++L++ Y KC    DA  VF  +   DV++WNS+I 
Sbjct: 354 SLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIIS 412

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            Y+QNG A +A+ LF++M  + + P   T ++VLSAC+  G  + G  +    +K  G+L
Sbjct: 413 GYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKA-GLL 471

Query: 556 PEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
               +  + +++   + G  E A +    +  K T   W  +        D   +  +  
Sbjct: 472 SGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTIT-WSAMIGGYGIQGDCSRSLELFG 530

Query: 615 QIL--ELDPDDAAVYVTLSNMYAEAGLQADA 643
            +L  +L+P++  ++ T+ +  + +G+  + 
Sbjct: 531 DMLKEKLEPNE-VIFTTILSACSHSGMLGEG 560



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 6/151 (3%)

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S+L  C  + SL    +IH+ +V      ++   + L+  Y   G  E A  +F ++   
Sbjct: 44  SLLGICKTVSSL---RKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNP 100

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP-TNSTFLAVLSACSHSGLVQDGQKV 544
           D+ SW  MI+ Y  N    + +  +   + + +    N  F  VL ACS      +G+K+
Sbjct: 101 DLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKL 160

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
              +VK     P+    + +VD+  +  ++E
Sbjct: 161 HCQIVKVGS--PDSFVLTGLVDMYAKCREVE 189


>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 298/555 (53%), Gaps = 9/555 (1%)

Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
           ++++ Y K G +   + +       D  S N +L+G  KN    +  + F+K+    V+P
Sbjct: 86  TILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRP 145

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           +++TY+ ++  C     +  G+Q+HA  +K+       +   LL MY + G + DA  VF
Sbjct: 146 DNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           +G+  R +++W A+I+ + ++G  +K + L   +  +GI  +EYT+ + L   A+     
Sbjct: 202 DGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVF 261

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
                H+ +I+RG     F   A+V++YS  G +  A +  +E+      VSW   I GF
Sbjct: 262 EAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEI-PDQDVVSWTVIIVGF 320

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESN 455
            ++   EEA+  F QM   D   + FT+  +L AC+   +       H  ++K     ++
Sbjct: 321 LQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGAD 380

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V VGS++++ Y+KCG   DA R F ++   D+ SWN +I  Y+QNG   KA+ L+ +MV+
Sbjct: 381 VVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVL 440

Query: 516 ---EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
               GI P   TF+ VL ACSH+GL+++G   F+ MV ++ I P   HY+CMVDLLGRAG
Sbjct: 441 LGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAG 500

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
            L+ A   I  LPIKP   +W  L  AC+ H D++M    ++ +   +P +++ YV L+N
Sbjct: 501 LLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLAN 560

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
            Y + G   +A E R++M+ + + K  GCSW+E+   ++ F + +  H ++    + L +
Sbjct: 561 SYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXLHPQIEVASQVLPR 620

Query: 693 LMQQIEDIGHTDNEK 707
           L  Q+ +   T  +K
Sbjct: 621 LYLQMRERSCTHRKK 635



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 201/420 (47%), Gaps = 38/420 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G++ HA I K     D F+  +L+ MYA+ G+I     V   MP   + + N +++ 
Sbjct: 159 LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISC 218

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           Y+K    D++   F +L    +  + YTY+ +L    +   + E  Q+H+  ++  + S 
Sbjct: 219 YSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSD 278

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
              +NAL+ +Y KCG +  A  +FE +  ++V+SWT II GF Q G  E+ + L   M+ 
Sbjct: 279 RFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQL 338

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIW 371
             I+PN +TF   L +CA       G  FH  V+K G+   D  VG+A+VDMYS  GE+ 
Sbjct: 339 GDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMG 398

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV---RNDAACDEFTYSSIL 428
           +A +  +EM +     SWN  I G+ +N    +A++ +++MV    +  A +E T+  +L
Sbjct: 399 DALRAFQEMPER-DIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVL 457

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            ACS           H+ ++K  +            +Y K       E V   L      
Sbjct: 458 CACS-----------HNGLLKEGY------------SYFK-------EMVDKHLIKPTAE 487

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            +  M+    + G  ++A  L   ++   I+P N  + A+L AC   G VQ  ++  E +
Sbjct: 488 HYTCMVDLLGRAGLLQEAEAL---ILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHL 544



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 183/347 (52%), Gaps = 9/347 (2%)

Query: 247 LQYLSKTAVS--NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPL 304
           L ++ + +V   N +L+ Y K G++ +A  +F+G  +R+  SW  +++G  ++    + L
Sbjct: 73  LHFMPQPSVVSYNTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGL 132

Query: 305 RLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
                MR   + P+ +T+ + +  C    +   G   HA ++K    L  F+GT ++ MY
Sbjct: 133 THFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMY 188

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           + +GEI +A+K    M  S   V+WNA I+ + +  + +++I  F Q+ R   + DE+TY
Sbjct: 189 AEVGEIGDARKVFDGM-PSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTY 247

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           + +L   +    +    Q+HS I++  F S+    ++L+  Y+KCG    A R+F ++  
Sbjct: 248 AIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPD 307

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
            DVVSW  +I  + Q+G   +A+ LF +M +  I P + TF  +L AC+ +   Q G+  
Sbjct: 308 QDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRH- 366

Query: 545 FESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           F  +V ++G+L  +    S +VD+  + G++  AL     +P +  A
Sbjct: 367 FHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIA 413



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 170/421 (40%), Gaps = 82/421 (19%)

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
           + HA ++K G+    +    ++  Y     + +A K L  M    S VS+N  ++G+F+ 
Sbjct: 36  VLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFM-PQPSVVSYNTILSGYFKF 94

Query: 400 QKTEEAIEAFSQMVRND--------AAC-----------------------DEFTYSSIL 428
               EAI+ F    + D        + C                       D FTY+ I+
Sbjct: 95  GLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIII 154

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
             C     L   +Q+H+ IVK   + +  +G++L+  Y + G   DA +VF  + +  +V
Sbjct: 155 PCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLV 210

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           +WN+MI  YS+ GR  K+I LF ++  EGI     T+  VL+  +    V +  +V  S+
Sbjct: 211 TWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQV-HSL 269

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP----------------------- 585
           + E G   +    + +V+L  + G +  A      +P                       
Sbjct: 270 IIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEA 329

Query: 586 -----------IKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSN 632
                      I+P +  +  L  AC   +  +        +L+  L   D  V   + +
Sbjct: 330 MWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVD 389

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
           MY++ G   DA    + M  ++I+     SW    N I   ++QN +  +  K+Y ++  
Sbjct: 390 MYSKCGEMGDALRAFQEMPERDIA-----SW----NGIICGYAQNGAGMKALKLYNEMVL 440

Query: 693 L 693
           L
Sbjct: 441 L 441



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 95/189 (50%), Gaps = 6/189 (3%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +L  C+     + GR +H L+ K  + G D  V +++V+MY+KCG++   +   ++MP  
Sbjct: 351 LLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPER 410

Query: 182 DIASCNCLLAGYAKNALFDQAFSFF---LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           DIAS N ++ GYA+N    +A   +   + L    + PN  T+  +L  C     + EG 
Sbjct: 411 DIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGY 470

Query: 239 QLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQ 296
               + +    +  TA     ++ +  + G++++AE++   L ++ + + W A++   K 
Sbjct: 471 SYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKL 530

Query: 297 HGDYEKPLR 305
           HGD +   R
Sbjct: 531 HGDVQMTRR 539


>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
 gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
          Length = 549

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 176/508 (34%), Positives = 275/508 (54%), Gaps = 22/508 (4%)

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI--CGSLSAIDEGKQLHAQTMKLQYLS 251
           A    F  A S FL++       +    S   A+  C +L     G  LHA  ++    +
Sbjct: 25  AAQGHFRDAISLFLRMRACAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFA 84

Query: 252 KTAVSNALLTMYIK--CG-----------------MMEDAESVFEGLVQRNVISWTAIIN 292
               +NALL +Y K  C                   +E    VF+ +++R+V+SW  ++ 
Sbjct: 85  DRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMIERDVVSWNTLVL 144

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
           G  + G + + L LV  M  +G  P+ +T +  L   A   +   G   H   ++ G   
Sbjct: 145 GCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDN 204

Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
             FVG++++DMY+       + K    +      + WN+ +AG  +N   EEA+  F +M
Sbjct: 205 DVFVGSSLIDMYANCTRTDYSVKVFDNL-PVRDPILWNSVLAGCAQNGSVEEALGIFRRM 263

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
           ++        T+SS++  C  L SL   +Q+H+ +++  FE NV + SSLI+ Y KCG  
Sbjct: 264 LQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEI 323

Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
             A  +F ++ + DVVSW +MI  Y+ +G AR+A++LFE+M +   +P + TFLAVL+AC
Sbjct: 324 SIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTAC 383

Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
           SH+GLV  G K F+SM   YGI+P   H + + D+LGRAG+L+ A  FIS + IKPTA +
Sbjct: 384 SHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASV 443

Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
           W  L  ACR H +  +AE ++K+I+EL+P     +V LSNMY+ +G   +A   RK M+ 
Sbjct: 444 WSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRK 503

Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSH 680
           K + K+P CSWIEV NK++ F + ++SH
Sbjct: 504 KGMKKDPACSWIEVKNKLHVFVAHDRSH 531



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 194/451 (43%), Gaps = 56/451 (12%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK--CG--------------- 166
           L  C+      LG   HAL  ++    D+F   +L+N+Y K  C                
Sbjct: 58  LKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGS 117

Query: 167 --DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
              ++S+  V  +M   D+ S N L+ G A+     +A     K+     +P+ +T S++
Sbjct: 118 STALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSV 177

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           L I    + +  G ++H   ++  + +   V ++L+ MY  C   + +  VF+ L  R+ 
Sbjct: 178 LPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDP 237

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           I W +++ G  Q+G  E+ L +   M + G+ P   TF+  +  C +L +   G   HA 
Sbjct: 238 ILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAY 297

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
           VI+ G     F+ ++++DMY   GEI  A      M  S   VSW A I G+  +    E
Sbjct: 298 VIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMC-SPDVVSWTAMIMGYALHGPARE 356

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACS--------------------LLPSLATC---- 440
           A+  F +M   +A  +  T+ ++L ACS                    ++P+L  C    
Sbjct: 357 ALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALA 416

Query: 441 ---------EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
                    ++ ++ I K + +    V S+L+ A     +   AE V  ++   +  S  
Sbjct: 417 DILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIG 476

Query: 492 SMI---KAYSQNGRARKAIILFEKMVVEGIR 519
           S +     YS +GR  +A  L + M  +G++
Sbjct: 477 SHVVLSNMYSASGRWNEAAHLRKSMRKKGMK 507



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 52/282 (18%)

Query: 104 VPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA 163
           VPVT  SL            +  C     L  G++ HA + +     + F+++SL++MY 
Sbjct: 271 VPVTFSSL------------IPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSSLIDMYC 318

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           KCG+I     +  +M   D+ S   ++ GYA +    +A   F +++  + +PNH T+  
Sbjct: 319 KCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLA 378

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L  C     +D+G          +Y    +    ++     C  + D            
Sbjct: 379 VLTACSHAGLVDKG---------WKYFKSMSDHYGIVPTLEHCAALADI----------- 418

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
                       + G+ ++    +  M+   I P    ++  L +C   +N+    M   
Sbjct: 419 ----------LGRAGELDEAYNFISKMQ---IKPTASVWSTLLRACRVHKNT----MLAE 461

Query: 344 QVIKRGMAL-GDFVGTAIV--DMYSGLGEIWEAKKQLKEMGK 382
           +V K+ M L    +G+ +V  +MYS  G   EA    K M K
Sbjct: 462 EVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRK 503


>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
          Length = 674

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 177/607 (29%), Positives = 328/607 (54%), Gaps = 10/607 (1%)

Query: 103 TVPVTCYS--LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVN 160
           ++P T ++  ++S     F    L   ++   L  G++ HA + K   C    +   +++
Sbjct: 57  SLPETGFTXLVDSCSTHSFSSHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLH 116

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA----KNALFDQAFSFFLKLDGIDVQP 216
           +Y KC +   +  +  +MP  ++ S N L+ G      K AL    F  F ++    + P
Sbjct: 117 VYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAP 176

Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVF 276
           N  T + +L     L+ +   +QLH   +K  + S   V +AL+  Y K G++++A+S F
Sbjct: 177 NCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAF 236

Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
           + +  R+++ W  +++ +  +G   K   +  LMR +G+  + +TFT  + SC  L +  
Sbjct: 237 DEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCG 296

Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
           +G   H  +I+    L   V +A+VDMYS    I +A+K    M    + VSW     G+
Sbjct: 297 LGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGM-JVKNIVSWTTMXVGY 355

Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
            ++   +E +    +M+R     DE   +SIL +C  L + +   Q+H+ +V++ FE+ +
Sbjct: 356 GQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFL 415

Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
            + ++L+ AY+KCGS   A + FS +   D++SW S++ AY+ +G +++ + +FEK++  
Sbjct: 416 SIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSS 475

Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
            +RP    FL VLSAC+H G V +G   F  M+  Y I+P+  HY+ ++DLLGRAG L+ 
Sbjct: 476 NVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDE 535

Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
           A+  ++++P++P +        AC+ + ++ +A + S+++  ++P++   Y  +SNMYA 
Sbjct: 536 AVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYAS 595

Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY---EKLKQL 693
            G   D    RKLM+ +   K PGCSW+E   +++ F S++K+H    +VY   + L +L
Sbjct: 596 VGHWFDVARVRKLMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLVRL 655

Query: 694 MQQIEDI 700
           M++ +D+
Sbjct: 656 MKEEDDV 662


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 172/515 (33%), Positives = 283/515 (54%), Gaps = 12/515 (2%)

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C    A++EG+++H             +SN L+ MY KCG + +A+ VF+ +  +NV SW
Sbjct: 51  CAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSW 110

Query: 288 TAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
           T ++ GF Q G   + ++L   M ++G  P+       + SC + +    G   H+    
Sbjct: 111 TMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAAS 170

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
            GM        AI++MY   G I EA      M +  + +SW+  IA F +N+  +EA+ 
Sbjct: 171 CGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEK-NVISWSTMIAAFCQNELADEALL 229

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN 467
            F  M +     D  TY S+L A + + +L   + +H RIV +  ++++ VG++L+  Y 
Sbjct: 230 FFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYG 289

Query: 468 KCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
           KCGS +DA  VF  +   +VVSWN+M+ AY QNGR+R+A+ LF+ M +EG+RP + TF+ 
Sbjct: 290 KCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVT 349

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIK 587
           +L  CSHSG  +D    F  M +++GI P E H+ C++D+LGR+GKLE A   I  +P+ 
Sbjct: 350 ILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVP 409

Query: 588 PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
             A +W  L  AC  H D   A   +++  + +P  AA Y+ LSN+YA      +A + R
Sbjct: 410 ADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVR 469

Query: 648 KLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----- 702
           K M+   + K+ G SWIE+  +++ F + +  H +  ++++ L++LM ++   G+     
Sbjct: 470 KRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRK 529

Query: 703 ------TDNEKEDRVLYHSERLAVGFGLISLPAKN 731
                  + EK++ + YHSE+LAV FG+ S P + 
Sbjct: 530 VVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRT 564



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 5/378 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           +++  C+  + LE GRR H  +    +   +F++  LV+MY KCG +     V   M + 
Sbjct: 46  QLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHK 105

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           ++ S   L+AG+ ++    +A   F ++      P+       +  CG+  A+ +G+++H
Sbjct: 106 NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIH 165

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
           +        S    +NA++ MY KCG + +A +VF  + ++NVISW+ +I  F Q+   +
Sbjct: 166 SAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD 225

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L    LM+++G++ +  T+   L +  S+    +G   H +++  G+     VG  +V
Sbjct: 226 EALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLV 285

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           +MY   G   +A+     M +  + VSWNA +A + +N ++ EA+  F  M       ++
Sbjct: 286 NMYGKCGSPDDARDVFDSMVEK-NVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPND 344

Query: 422 FTYSSILKACSLLPSL--ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
            T+ +IL  CS       A    +  R         VH G  LI+   + G  E+AE + 
Sbjct: 345 ITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFG-CLIDMLGRSGKLEEAEELI 403

Query: 480 SQL-TAADVVSWNSMIKA 496
             +   AD V W S++ A
Sbjct: 404 QAMPVPADAVLWTSLLCA 421



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 21/289 (7%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           L D+  +++ +  C   + L  GR  H+      +  D     +++NMY KCG I    A
Sbjct: 139 LPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFA 198

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA 233
           V  +MP  ++ S + ++A + +N L D+A  FF  +    ++ +  TY ++L    S+ A
Sbjct: 199 VFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGA 258

Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           ++ GK LH + +     +   V N L+ MY KCG  +DA  VF+ +V++NV+SW A++  
Sbjct: 259 LELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAA 318

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA---------- 343
           + Q+G   + L L   M  +G+ PN+ TF   L  C     SH G    A          
Sbjct: 319 YGQNGRSREALALFDSMDLEGVRPNDITFVTILYCC-----SHSGKFKDAVSHFVEMRQD 373

Query: 344 -QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
             +  R +  G      ++DM    G++ EA++ ++ M   A +V W +
Sbjct: 374 FGITPREVHFG-----CLIDMLGRSGKLEEAEELIQAMPVPADAVLWTS 417



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 166/366 (45%), Gaps = 9/366 (2%)

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
           V+R +  W + +    + G  +     V L+ + G           +  CA  +    G 
Sbjct: 5   VRRAITKWLSPV---LECGGVDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGR 61

Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
             H  +    +    F+   +VDMY   G + EAK+    M +  +  SW   +AGF ++
Sbjct: 62  RIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAM-QHKNVFSWTMLMAGFVQS 120

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +  EAI+ F +M +     D       + +C    +L+   +IHS       +S++   
Sbjct: 121 GRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTA 180

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           +++I  Y KCGS  +A  VF+++   +V+SW++MI A+ QN  A +A++ F+ M  EG+ 
Sbjct: 181 NAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGME 240

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               T+++VL A +  G ++ G+ +   +V   G+       + +V++ G+ G  + A  
Sbjct: 241 LDRITYVSVLDAYTSVGALELGKALHVRIVYA-GLDTSIVVGNTLVNMYGKCGSPDDARD 299

Query: 580 FISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEA 637
              ++ ++     W  + AA      S   +A F S  +  + P+D   +VT+    + +
Sbjct: 300 VFDSM-VEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPND-ITFVTILYCCSHS 357

Query: 638 GLQADA 643
           G   DA
Sbjct: 358 GKFKDA 363


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 183/602 (30%), Positives = 314/602 (52%), Gaps = 18/602 (2%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
           + F+   LV  Y +C  I   VA   ++   +  S   ++  Y +N L  +A   F K  
Sbjct: 16  ETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSI 75

Query: 211 GIDVQPNHYTYSTMLAICGSLSA--IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
             ++Q N  TY T+L  C  L    +++GK++H   +   + +   V N+L+ MY KCG 
Sbjct: 76  NEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGS 135

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
            + A  VFE +  +N+IS+T++I  +     + +   L   M  +GI P+ Y +  ALA 
Sbjct: 136 FKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV 195

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
           C ++R    G   H ++             A+V MY   G I  AK     + +     S
Sbjct: 196 CPTIRE---GEAIHVKLGNHERRT-PVCSNALVGMYGRFGRIASAKWVFDGI-RYKDLAS 250

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           +N  IA F +     +AI  + +M   +   + +T++S+L ACS L +L   ++IH ++ 
Sbjct: 251 YNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVK 310

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
                ++V   ++L+  Y KCGS  +A  VF+     +V +W S++ AYSQ G+++  + 
Sbjct: 311 GGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLE 370

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
            +++M  EG+ P + TF A+ +ACSHSGL  +G   F +M +++ I+P + HY+CM+DLL
Sbjct: 371 AYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLL 430

Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
           GR G+L  A   +  +P  P    W  L +AC+ + DLK+     K+I EL+P D+  Y+
Sbjct: 431 GRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYL 490

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            + NMYA+AG  AD  E +K++K + ++K PG S IE   +I+ F   + +H    ++  
Sbjct: 491 LMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRA 550

Query: 689 KLKQLMQQIEDIGHTDNEKE-----------DRVLYHSERLAVGFGLISLPAKNKFECSR 737
           +L+++ +Q+   G+  + KE           + +L+HSER+A+G GL++  A       +
Sbjct: 551 RLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVK 610

Query: 738 TL 739
            L
Sbjct: 611 NL 612



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 203/440 (46%), Gaps = 15/440 (3%)

Query: 121 IEVLSYCSR--EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           + VL  C+   E+ LE G+  H          D  V  SL++MYAKCG  K    V ++M
Sbjct: 87  VTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFEKM 146

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              ++ S   ++  Y   A   +A+  + K+    + P+ Y Y+  LA+C +   I EG+
Sbjct: 147 EPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPT---IREGE 203

Query: 239 QLHAQTMKLQYLSKTAV-SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            +H +    +   +T V SNAL+ MY + G +  A+ VF+G+  +++ S+  +I  F ++
Sbjct: 204 AIHVKLGNHE--RRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKY 261

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            D  K + L   M    ++PN +TFT  L +C+ L     G   H +V            
Sbjct: 262 DDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYN 321

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           TA+V+MY+  G   EA+    + G   +  +W + ++ + +  +++  +EA+ +M     
Sbjct: 322 TALVNMYAKCGSTHEARAVFNDCGLK-NVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGV 380

Query: 418 ACDEFTYSSILKACSL--LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             D+ T+++I  ACS   LP          R          H  + +I+   + G   +A
Sbjct: 381 IPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHY-TCMIDLLGRVGRLREA 439

Query: 476 ERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           E +   +  + DVV+W  ++ A    G  +     + K + E   P +  +L + +  + 
Sbjct: 440 EELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAY-KRITELNPPDSGPYLLMGNMYAK 498

Query: 535 SGLVQDGQKVFESMVKEYGI 554
           +G   D  +V + M+K+ G+
Sbjct: 499 AGKWADVAEV-KKMIKQRGL 517



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 64/112 (57%), Gaps = 4/112 (3%)

Query: 444 HSRIVKSKFESN--VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
           H RI+ +  E      +G+ L+ AY +C S +DA   FS++   +  S+  M+ AY +N 
Sbjct: 3   HERIIDANLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQEND 62

Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG--LVQDGQKVFESMVKE 551
             +KA+ LF+K + E ++   +T++ VL +C+H G   ++DG+++    + +
Sbjct: 63  LHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQ 114


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 173/534 (32%), Positives = 285/534 (53%), Gaps = 3/534 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           DK     V+  CS    L +G   H     +    + FV  SL+ MY  CG +     V 
Sbjct: 183 DKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVF 242

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             M    + S N +++G+ +N   ++A + F  +    V+P+  T  + L  CG L  ++
Sbjct: 243 NVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELE 302

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G ++H    K     K  V NAL+ MY +CG M++A  VF    +++VI+WT++ING+ 
Sbjct: 303 LGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYI 362

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
            +G+ +  L L   M+ DG+ PN  T    L++CASL     G   HA V+++ +     
Sbjct: 363 MNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVL 422

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           V TA++DMY+    +     Q+        +V WNA ++G   N+   EA+  F  M+  
Sbjct: 423 VVTALIDMYAKCNAV-SYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIE 481

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
           +   +  T++S++ A ++L  L     +HS +V+S F S + V + LI+ Y+KCGS + A
Sbjct: 482 EVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYA 541

Query: 476 ERVFSQLT--AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
            ++F ++     D++ W+ +I  Y  +G    A++LF +MV  G++P   TF +VL ACS
Sbjct: 542 HKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACS 601

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H GLV DG  +F+ M++ Y   P   HY+C+VDLLGRAG+L+ A   I ++P +    IW
Sbjct: 602 HRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIW 661

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
             L  AC  H ++++ E  ++++ EL+P+    Y+ L+N+YA  G   DAE  +
Sbjct: 662 GALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENHK 715



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 218/440 (49%), Gaps = 10/440 (2%)

Query: 216 PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESV 275
           P+ YT+  ++  C  +S ++ G  +H + +   + S   V N+LL MY+ CG +  A  V
Sbjct: 182 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 241

Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
           F  +++R+V+SW  +I+G+ Q+G  E+ L +   M +  ++P+  T   AL SC  L+  
Sbjct: 242 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKEL 301

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
            +G   H  V K  +     V  A+VDMYS  G + EA     E  K    ++W + I G
Sbjct: 302 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAET-KEKDVITWTSMING 360

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
           +  N   + A+     M  +    +  T +S+L AC+ L  L   + +H+ +++ K +S+
Sbjct: 361 YIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSD 420

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
           V V ++LI+ Y KC +   + +VF++ +    V WN+++     N  AR+A+ LF+ M++
Sbjct: 421 VLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLI 480

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKV--FESMVKEYGILPEEAHYSCMVDLLGRAGK 573
           E +   ++TF +V+ A     ++ D ++V    S +   G + + A  + ++D+  + G 
Sbjct: 481 EEVEANHATFNSVIPA---YAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGS 537

Query: 574 LEIALIFISNLPIKPTAPI-WRPLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTL 630
           L+ A      +P K    I W  L A    H   + A  +  Q++   + P++   + ++
Sbjct: 538 LDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEIT-FTSV 596

Query: 631 SNMYAEAGLQADAEEQRKLM 650
            +  +  GL  D     K M
Sbjct: 597 LHACSHRGLVDDGLTLFKYM 616



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 216/460 (46%), Gaps = 12/460 (2%)

Query: 233 AIDEGKQLHAQTMKLQYLSK---TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
           ++++ K LH  T+    L       + + L   Y  CG +  A  +F+ L   ++  W A
Sbjct: 94  SLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNA 153

Query: 290 IINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           II  +   G +   LR+   M   G   P++YTF + + +C+ +   ++G + H + +  
Sbjct: 154 IIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVS 213

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G +   FV  +++ MY   G++  A++    M K  S VSWN  I+G+F+N + EEA+  
Sbjct: 214 GFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKR-SVVSWNTMISGWFQNGRPEEALAV 272

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F+ M+      D  T  S L +C  L  L    ++H  + K+  +  + V ++L++ Y++
Sbjct: 273 FNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSR 332

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  ++A  VF++    DV++W SMI  Y  NG A+ A+ L   M ++G+ P   T  ++
Sbjct: 333 CGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           LSAC+    ++ G K   + V    +  +    + ++D+  +   +  +    +   +K 
Sbjct: 393 LSACASLCCLKQG-KSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKR 451

Query: 589 TAPIWRPLFAACRCHSDL---KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEE 645
           T P W  L +    H++L    +  F S  I E++ + A     +      A L+     
Sbjct: 452 TVP-WNALLSGL-IHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNL 509

Query: 646 QRKLMKMKEISKEPGCS-WIEVYNKIYRFFSQNKSHSEMP 684
              L++   ISK    +  I++Y+K       +K   E+P
Sbjct: 510 HSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIP 549



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 395 GFFRNQ----KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
           G FRN      T +A+     ++ N   CD     S+L   +   SL   + +H   + S
Sbjct: 54  GDFRNNLSNSNTTKALSKSKSLIANVHRCD-----SLLCHYAATRSLNKTKILHGHTITS 108

Query: 451 KFESN---VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
               +   +H+ S L  +Y  CG    A ++F  L+   +  WN++IK Y   G    A+
Sbjct: 109 GLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDAL 168

Query: 508 ILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDG 541
            +F+ M+  G   P   TF  V+ ACS   ++  G
Sbjct: 169 RVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVG 203


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 290/539 (53%), Gaps = 10/539 (1%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
           H+L  +     D ++ + L+ +Y++CG +++   V ++M   D+     L++   +N   
Sbjct: 159 HSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGEL 218

Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
            +A     ++    +QPN +T ++MLA C        G+Q+H   +K+        S AL
Sbjct: 219 ARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYASTAL 274

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           +  Y + G    A++VFE L  +NV+SW +++    + G  +  LR+   M  +G+ PNE
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNE 334

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           + F++AL++C S+    +G   H   IKR +     V  A++ MY   G + E +  L +
Sbjct: 335 FAFSIALSACGSV---CLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGK 391

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           + ++   VSW A I+  F+N  +E+A+    QM       +++ +SS L +C+ L  L  
Sbjct: 392 I-ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQ 450

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
             Q+H   +K   +  V  G++LI  Y+KCG    A   F  +   DV+SWNS+I   +Q
Sbjct: 451 GRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQ 510

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +G A  A+  F +M     RP +STFL+VL  C+H+GLV++G+  F  M   YG+ P  +
Sbjct: 511 HGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPS 570

Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
           HY+CM+D+LGR G+   AL  I N+P +P   IW+ L A+C+ H +L + +  + +++EL
Sbjct: 571 HYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMEL 630

Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI--YRFFSQ 676
              D+A YV +SN+YA      DAE  R+ M    + K+ G SWIEV N++   RF  Q
Sbjct: 631 SERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVEAARFVHQ 689



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 194/381 (50%), Gaps = 8/381 (2%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYST 223
           K G +   + +  +MP  ++ +    ++G  +N   + A + F  +    V PN +  + 
Sbjct: 82  KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
            LA C +  A+  G+Q+H+  ++  + +   + + L+ +Y +CG +  AE VF  +   +
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           V+ +T++++   ++G+  + + ++C M   G+ PNE+T T  LA C       +G   H 
Sbjct: 202 VVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP----RGIGEQIHG 257

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            ++K   +   +  TA++D YS  G+   AK   + + +S + VSW + +    R+ + +
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENL-ESKNVVSWCSMMQLCIRDGRLD 316

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           +A+  FS+M+      +EF +S  L AC    S+    QIH   +K    +++ V ++L+
Sbjct: 317 DALRVFSEMISEGVQPNEFAFSIALSACG---SVCLGRQIHCSAIKRDLMTDIRVSNALL 373

Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
             Y + G   + E V  ++   D+VSW + I A  QNG + KA+ L  +M  EG  P + 
Sbjct: 374 SMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDY 433

Query: 524 TFLAVLSACSHSGLVQDGQKV 544
            F + LS+C+   L+  G+++
Sbjct: 434 AFSSGLSSCADLALLHQGRQL 454



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 173/327 (52%), Gaps = 12/327 (3%)

Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
           L   +K G + DA  +F+ + ++NV++WT  I+G  ++G  E    +   M E G+ PN+
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
           +    ALA+CA+     +G   H+  ++ G A   ++G+ ++++YS  G +  A++  + 
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRR 196

Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
           M ++   V + + ++   RN +   A++   QM R     +E T +S+L  C        
Sbjct: 197 M-EAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGI 251

Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
            EQIH  ++K     +V+  ++LI+ Y++ G +  A+ VF  L + +VVSW SM++   +
Sbjct: 252 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIR 311

Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
           +GR   A+ +F +M+ EG++P    F   LSAC   G V  G+++  S +K   ++ +  
Sbjct: 312 DGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKR-DLMTDIR 367

Query: 560 HYSCMVDLLGRAG---KLEIALIFISN 583
             + ++ + GR+G   +LE  L  I N
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIEN 394



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 129/252 (51%), Gaps = 18/252 (7%)

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V+W   I+G  RN + E A   F+ M+ +  A ++F  ++ L AC+   +L   EQ+HS 
Sbjct: 102 VAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSL 161

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
            V++ F ++  +GS LIE Y++CGS   AE VF ++ A DVV + S++ A  +NG   +A
Sbjct: 162 AVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARA 221

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY--SCM 564
           + +  +M  +G++P   T  ++L+ C   G+   G+++   M+K  G    ++ Y  + +
Sbjct: 222 VDVLCQMTRQGLQPNEHTMTSMLAECPR-GI---GEQIHGYMLKVMG---SQSVYASTAL 274

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC----RCHSDLKM-AEFISKQILEL 619
           +D   R G    A     NL  K     W  +   C    R    L++ +E IS+ +   
Sbjct: 275 IDFYSRYGDFGTAKTVFENLESKNVVS-WCSMMQLCIRDGRLDDALRVFSEMISEGV--- 330

Query: 620 DPDDAAVYVTLS 631
            P++ A  + LS
Sbjct: 331 QPNEFAFSIALS 342


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 171/519 (32%), Positives = 288/519 (55%), Gaps = 12/519 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           S  L +C    ++  GK  H   +    ++ T   N L+ +Y KCG  + A  VF+ +  
Sbjct: 61  SQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHV 120

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R+++SW  +I G+   G+  + L+L   M  +G   +E+T +  + +CA+    +     
Sbjct: 121 RSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQL 180

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   +K  +    FVGTAI+D+Y+    I +A    ++M +  + V+W++  AG+ +N  
Sbjct: 181 HTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPER-TLVTWSSLFAGYVQNGL 239

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            EEA+  F    R      EFT S+IL AC+ L       Q+H+ I+K  F  N  V +S
Sbjct: 240 HEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAAS 299

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           L++ Y +CG  E A  +F+ +   +VV WN+MI ++S++  + +A+ILFEKM   GI P 
Sbjct: 300 LVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPN 359

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             T+L+VLS CSH+GLV+ G+  F  ++ +  + P   HYSCMVD+LGR+GK + A   +
Sbjct: 360 EVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELL 419

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
           + +P +PTA +W  L  +CR ++++++A   ++Q+ +L+PD+   +V LSN+YA +G   
Sbjct: 420 NKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWE 479

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           +    RK +K     KE G SWIE   K++ F    + H  +  +Y KL+++  ++    
Sbjct: 480 NVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEIYHEMRKFA 539

Query: 702 HTDN-----------EKEDRVLYHSERLAVGFGLISLPA 729
              +           +KE+ + +HSE+LA+ FGLISLP+
Sbjct: 540 RRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPS 578



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 205/421 (48%), Gaps = 5/421 (1%)

Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
            +L+D   + + L  C++ + L +G+  H L     +  D      L+N+Y KCG     
Sbjct: 52  RNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCA 111

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
             V   M    I S N ++AGY  +    QA   F ++       + +T S+ +  C + 
Sbjct: 112 RLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAK 171

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
            AI+E KQLH   +KL   S + V  A+L +Y KC M++DA  VFE + +R +++W+++ 
Sbjct: 172 YAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLF 231

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            G+ Q+G +E+ L L    + +G++  E+T +  L++CASL     G   HA ++K G  
Sbjct: 232 AGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFH 291

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
              FV  ++VD+Y+  G+I +A      M +  + V WNA IA F R+  + EA+  F +
Sbjct: 292 GNFFVAASLVDVYARCGQIEKAYALFAYM-EHKNVVIWNAMIASFSRHAHSWEAMILFEK 350

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCG 470
           M +     +E TY S+L  CS    +       S ++  +  E NV   S +++   + G
Sbjct: 351 MQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSG 410

Query: 471 SWEDAERVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
             ++A  + +++      S W S++ +       R A I  E++    + P N     +L
Sbjct: 411 KTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLF--QLEPDNGGNHVLL 468

Query: 530 S 530
           S
Sbjct: 469 S 469



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 2/180 (1%)

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D    S  L+ C+   SL   +  H   +     ++    + LI  Y KCG  + A  VF
Sbjct: 56  DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
             +    +VSWN+MI  Y+ +G   +A+ LF +M  EG   +  T  + + AC+    + 
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175

Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           + +++  ++  +  +       + ++D+  +   ++ A      +P + T   W  LFA 
Sbjct: 176 ECKQL-HTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFAG 233


>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 623

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 175/518 (33%), Positives = 293/518 (56%), Gaps = 14/518 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           ST++    S S++   + +HA  +K        + + L++ Y+K G  +DA  +F+ + +
Sbjct: 49  STLILHLKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPK 108

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYM 340
           ++ +SW ++++G  + G   + L + C M+ D  +  NE+TF   +++C S +    GY 
Sbjct: 109 KDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYY 168

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS-VSWNAQIAGFFRN 399
            H   +K G+     V  A+V+MY   G +  A +   EM +S  S VSWN+ +A   +N
Sbjct: 169 VHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQN 228

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
               EA   F  M  N    D+ T  S+L+AC   P     E +H  I     + N+ + 
Sbjct: 229 GMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIV 288

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GI 518
           ++L+  Y+K G   ++ +VF +++  D V+W +M+  Y+ +G  ++AI  FE++V E G+
Sbjct: 289 TTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGM 348

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            P + TF  +LSACSHSGLV++G+  F  M   Y + P   HYSCMVDLLGR G L+ A 
Sbjct: 349 EPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAH 408

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I N+P +P + +W  L  ACR H ++ + +  +K ++ LDP D   Y+ LSNMY+ AG
Sbjct: 409 ELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAG 468

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
           L  DA + R LMK K +++  GCS+IE  NKI+RF   + +H +  ++++KL+++M++I+
Sbjct: 469 LWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQ 528

Query: 699 DIG---------HTDNE--KEDRVLYHSERLAVGFGLI 725
           D+G         H  +E  K D +  HSE++A+ +GL+
Sbjct: 529 DVGFVHETESILHDVDEEVKIDMITKHSEKIALAYGLL 566



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 173/362 (47%), Gaps = 28/362 (7%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R  HA + K+    D F+   LV+ Y K G  K    +  +MP  D  S N L++G AK 
Sbjct: 65  RIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKI 124

Query: 197 ALFDQAFSFFLKLDG-IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
               +  S F K+    +++ N +T+ ++++ C S  A DEG  +H   MKL  + +  V
Sbjct: 125 GQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKV 184

Query: 256 SNALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            NAL+ MY K G +E A  +F  +   +++++SW +I+    Q+G   +      +MR +
Sbjct: 185 VNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVN 244

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G  P++ T    L +C +     M  + H  +   G+     + T ++++YS LG +  +
Sbjct: 245 GFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNS 304

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACS 432
           +K  +E+ K    V+W A +AG+  +   +EAIE F ++VR +    D  T++ +L ACS
Sbjct: 305 RKVFEEISK-PDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACS 363

Query: 433 LLPSLATCEQIHSRIVKS------------KFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
                      HS +VK             K +  +   S +++   +CG  +DA  +  
Sbjct: 364 -----------HSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIK 412

Query: 481 QL 482
            +
Sbjct: 413 NM 414



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 146/311 (46%), Gaps = 22/311 (7%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           + V+S C  E+  + G   H    K  +  +  V  +LVNMY K G ++S   +  +MP 
Sbjct: 151 LSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPE 210

Query: 181 LD--IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            +  I S N ++A  A+N + ++AF+ F  ++++G    P+  T  ++L  C +      
Sbjct: 211 SEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGF--FPDDATMVSLLQACENFPLGRM 268

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
            + LH             +   LL +Y K G + ++  VFE + + + ++WTA++ G+  
Sbjct: 269 VEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAM 328

Query: 297 HGDYEKPLRLV-CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA---- 351
           HG  ++ +     ++RE+G++P+  TFT  L++C     SH G +   +   R M+    
Sbjct: 329 HGCGKEAIEFFERIVREEGMEPDHVTFTHLLSAC-----SHSGLVKEGKYFFRVMSDVYK 383

Query: 352 ----LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
               L  +  + +VD+    G + +A + +K M    +S  W A +     ++  +   E
Sbjct: 384 VQPRLDHY--SCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKE 441

Query: 408 AFSQMVRNDAA 418
           A   ++  D +
Sbjct: 442 AAKNLIALDPS 452



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 154/362 (42%), Gaps = 35/362 (9%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCG---DQFVTASLVNMYAKCGDIKSMV 172
           D   ++ +L  C   E   LGR    L      CG   +  +  +L+N+Y+K G + +  
Sbjct: 249 DDATMVSLLQAC---ENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSR 305

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQPNHYTYSTMLAICG 229
            V +++   D  +   +LAGYA +    +A  FF ++   +G+  +P+H T++ +L+ C 
Sbjct: 306 KVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGM--EPDHVTFTHLLSACS 363

Query: 230 SLSAIDEGK---QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVI 285
               + EGK   ++ +   K+Q   +    + ++ +  +CG+++DA  + + +  + N  
Sbjct: 364 HSGLVKEGKYFFRVMSDVYKVQ--PRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSG 421

Query: 286 SWTAIINGFKQHGDY----EKPLRLVCLMREDGIDPNEYTFTVALASCASLRN--SHMGY 339
            W A++   + H +     E    L+ L   D  DP  Y     + S A L N  S +  
Sbjct: 422 VWGALLGACRVHRNIDLGKEAAKNLIAL---DPSDPRNYIMLSNMYSAAGLWNDASKVRT 478

Query: 340 MFHAQVIKRGMAL-----GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
           +   +V+ R         G+ +   +VD Y+   +     K+L+E+ K    V +  +  
Sbjct: 479 LMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTH-PDSHRIHKKLEEVMKKIQDVGFVHETE 537

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
               +   E  I+  ++     A       ++      ++ +L  C   H+ +   KF S
Sbjct: 538 SILHDVDEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTV---KFVS 594

Query: 455 NV 456
            V
Sbjct: 595 MV 596


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 199/663 (30%), Positives = 334/663 (50%), Gaps = 55/663 (8%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSM 171
           LL     + +LS C   + L   ++ H+ I KT +   QF  + L+   A    G++   
Sbjct: 29  LLQNHPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYA 85

Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
           + + + +   +    N ++ G + ++    A  F++++    V+PN YT+  +L  C  +
Sbjct: 86  LLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKV 145

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG------------------------ 267
            A  EGKQ+H   +KL   S   V  +L+ MY + G                        
Sbjct: 146 GATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALI 205

Query: 268 -------MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
                   ++DA  +FE +  R+ +SW A+I G+ Q G +E+ L     M+   + PNE 
Sbjct: 206 TGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNES 265

Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEM 380
           T    L++CA   +  +G    + +   G+     +  A++DMYS  G++ +A+   + +
Sbjct: 266 TMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGI 325

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +    +SWN  I G+      +EA+  F +M +++   ++ T+ SIL AC+ L +L   
Sbjct: 326 CEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLG 384

Query: 441 EQIHSRIVKSKFE--SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
           + IH+ I K KF   +N  + +SLI+ Y KCG+ E A++VF+ +    + SWN+MI   +
Sbjct: 385 KWIHAYIDK-KFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLA 443

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G A  A+ LF +M  EG  P + TF+ VLSACSH+GLV+ G++ F SMV++Y I P+ 
Sbjct: 444 MHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKL 503

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY CM+DLLGRAG  + A   + N+ +KP   IW  L  ACR H ++++ EF +K + E
Sbjct: 504 QHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFE 563

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQ-N 677
           L+P++   YV LSN+YA AG   D    R  +  K + K            IY+   + +
Sbjct: 564 LEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKX---------QDIYKMLDEID 614

Query: 678 KSHSEMPKVYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
           +S  E P       +++  ++     +  KE  + +HSE+LA+ FGLIS   +      +
Sbjct: 615 QSFGERPGXVPDTSEVLYDMD-----EEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVK 669

Query: 738 TLE 740
            L 
Sbjct: 670 NLR 672


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 167/458 (36%), Positives = 269/458 (58%), Gaps = 13/458 (2%)

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           R++ SWT++I G+ Q+   ++ L L+  M      PN +TF   L +  +  +S +G   
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           HA  +K       +VG+A++DMY+  G +  A     ++ +S + VSWNA IAGF R   
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKNGVSWNALIAGFARKGD 122

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
            E  +  F++M RN      FTYSS+  A + + +L   + +H+ ++KS    +  VG++
Sbjct: 123 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 182

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           +++ Y K GS  DA +VF  +   D+V+WNSM+ A++Q G  R+A+  FE+M   G+   
Sbjct: 183 ILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 242

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             TFL++L+ACSH GLV++G++ F+ M+KE+ + PE  HY  +VDLLGRAG L  AL+FI
Sbjct: 243 QITFLSILTACSHGGLVKEGKQYFD-MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFI 301

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +P+KPTA +W  L  +CR H + K+ +F +  + ELDPDD    V L N+YA  G   
Sbjct: 302 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 361

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
            A   RK+MK   + KEP CSW+E+ N ++ F + + +H    ++Y+K +++  QI   G
Sbjct: 362 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 421

Query: 702 HTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
           +  N           E++ ++ YHSE++A+ F LI++P
Sbjct: 422 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMP 459



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 154/298 (51%), Gaps = 1/298 (0%)

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
           M   D+ S   L+AGYA+N + D+A    L +     +PN +T++++L   G+ ++   G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+HA T+K  +     V +ALL MY +CG M+ A +VF+ L  +N +SW A+I GF + 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           GD E  L +   M+ +G +   +T++   ++ A +     G   HA +IK G  L  FVG
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
             I+DMY+  G + +A+K    + K    V+WN+ +  F +     EA+  F +M +   
Sbjct: 181 NTILDMYAKSGSMIDARKVFDHVDKK-DLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
             ++ T+ SIL ACS    +   +Q    + +   E  +    ++++   + G   DA
Sbjct: 240 HLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDA 297



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 106/196 (54%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
           +G + HAL  K     D +V ++L++MYA+CG +   +AV  Q+   +  S N L+AG+A
Sbjct: 59  IGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFA 118

Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
           +    +     F ++     +  H+TYS++ +    + A+++GK +HA  +K        
Sbjct: 119 RKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 178

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           V N +L MY K G M DA  VF+ + ++++++W +++  F Q+G   + +     MR+ G
Sbjct: 179 VGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCG 238

Query: 315 IDPNEYTFTVALASCA 330
           +  N+ TF   L +C+
Sbjct: 239 VHLNQITFLSILTACS 254



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 1/176 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V S  +    LE G+  HA + K+      FV  ++++MYAK G +     V   +   D
Sbjct: 148 VFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKD 207

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N +L  +A+  L  +A + F ++    V  N  T+ ++L  C     + EGKQ   
Sbjct: 208 LVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFD 267

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAES-VFEGLVQRNVISWTAIINGFKQH 297
              +     +      ++ +  + G++ DA   +F+  ++     W A++   + H
Sbjct: 268 MMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 323



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 2/118 (1%)

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
           ++  D+ SW S+I  Y+QN    +A+ L   M+    +P   TF ++L A   S     G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
           +++    VK Y    +    S ++D+  R G++++A+     L  K     W  L A 
Sbjct: 61  EQIHALTVK-YDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVS-WNALIAG 116


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 324/619 (52%), Gaps = 16/619 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  GR  H  + +     D  V  +L+ MY KCGD+KS   +  +MP  D
Sbjct: 202 VLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N +++GY +N +  +    F  + G+ V P+  T +++++ C  L     G+ +HA
Sbjct: 262 IISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +   +    +V N+L  MY+  G   +AE +F  +  ++++SWT +I+G++ +   EK
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEK 381

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M +D + P+E T    L++CA+L +   G   H   IK  +     V   +++
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    I +A      + +  + +SW + IAG   N +  EA+  F QM +     +  
Sbjct: 442 MYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAI 499

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T ++ L AC+ + +L   ++IH+ ++++    +  + ++L++ Y +CG    A   F+  
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS- 558

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV SWN ++  YS+ G+    + LF++MV   +RP   TF+++L  C  S +V+ G 
Sbjct: 559 QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGL 618

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M +EYG+ P   HY+C+VDLLGRAG+L+ A  FI  +P+ P   +W  L  ACR 
Sbjct: 619 MYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H ++ + E  +++I ELD      Y+ L N+YA+ G   +  + R++MK   ++ + GCS
Sbjct: 678 HHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-----------HTDNEKEDRV 711
           W+EV  K++ F S +K H +  ++   L    +++ ++G            T+  +++  
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIF 797

Query: 712 LYHSERLAVGFGLI-SLPA 729
             HSER A+ FGLI S+P 
Sbjct: 798 CGHSERKAIAFGLINSVPG 816



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 245/468 (52%), Gaps = 4/468 (0%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           L   +D+   + ++  C  +   E G + +++   +       +  + + M+ + G++  
Sbjct: 88  LRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVD 147

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICG 229
              V  +M   ++ S N L+ GYAK   FD+A   + ++  +  V+P+ YT+  +L  CG
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCG 207

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            +  +  G+++H   ++  Y     V NAL+TMY+KCG ++ A  +F+ + +R++ISW A
Sbjct: 208 GIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNA 267

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +I+G+ ++G   + L+L   MR   +DP+  T T  +++C  L +  +G   HA VI  G
Sbjct: 268 MISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
            A+   V  ++  MY   G   EA+K    M      VSW   I+G+  N   E+AI+ +
Sbjct: 328 FAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTTMISGYEYNFLPEKAIDTY 386

Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
             M ++    DE T +++L AC+ L  L T  ++H   +K++  S V V ++LI  Y+KC
Sbjct: 387 RMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC 446

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
              + A  +F  +   +V+SW S+I     N R  +A+I F +M +  ++P   T  A L
Sbjct: 447 KCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAAL 505

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           +AC+  G +  G+++   +++  G+  ++   + ++D+  R G++ IA
Sbjct: 506 AACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNIA 552



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 19/442 (4%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           L G   N   ++A      +  + V  +   +  ++ +C    A +EG ++++  +    
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
                + NA L M+++ G + DA  VF  + +RN+ SW  ++ G+ + G +++    +CL
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEA---ICL 182

Query: 310 MRE----DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYS 365
                   G+ P+ YTF   L +C  + +   G   H  V++ G  L   V  A++ MY 
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYV 242

Query: 366 GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS 425
             G++  A+     M +    +SWNA I+G+F N    E ++ F  M       D  T +
Sbjct: 243 KCGDVKSARLLFDRMPRR-DIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLT 301

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S++ AC LL        IH+ ++ + F  ++ V +SL + Y   GSW +AE++FS++   
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCK 361

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF 545
           D+VSW +MI  Y  N    KAI  +  M  + ++P   T  AVLSAC+  G +  G ++ 
Sbjct: 362 DIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421

Query: 546 ESMVK----EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
           +  +K     Y I+        ++++  +   ++ AL    N+P K     W  + A  R
Sbjct: 422 KLAIKARLISYVIVANN-----LINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLR 475

Query: 602 CHSDLKMAEFISKQI-LELDPD 622
            ++    A    +Q+ + L P+
Sbjct: 476 LNNRCFEALIFFRQMKMTLQPN 497



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
           Q+ G   N K EEA++  + M     A DE  + ++++ C    +     +++S  + S 
Sbjct: 65  QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSM 124

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
              +V +G++ +  + + G+  DA  VF +++  ++ SWN ++  Y++ G   +AI L+ 
Sbjct: 125 NSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYH 184

Query: 512 KMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +M+ V G++P   TF  VL  C     +  G++V   +V+ YG   +    + ++ +  +
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVR-YGYELDIDVVNALITMYVK 243

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPL----FAACRCHSDLKMAEFISKQILELDPDDAAV 626
            G ++ A +    +P +     W  +    F     H  LK+  F + + L +DPD    
Sbjct: 244 CGDVKSARLLFDRMPRRDIIS-WNAMISGYFENGMGHEGLKL--FFAMRGLSVDPD---- 296

Query: 627 YVTLSNMYAEAGLQADAEEQRKL 649
            +TL+++ +   L  D    R +
Sbjct: 297 LMTLTSVISACELLGDRRLGRDI 319


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 308/569 (54%), Gaps = 44/569 (7%)

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC-------- 266
           +P+   YST++  C     + +GK++H       ++    + N LL MY KC        
Sbjct: 67  KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQK 126

Query: 267 -----------------------GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
                                  G++++A+S+F+ + +R+  SWTA+I+G+ +H    + 
Sbjct: 127 LFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEA 186

Query: 304 LRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
           L L  +M R D    N++T + ALA+ A++    +G   H  +++ G+   + V +A+ D
Sbjct: 187 LELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSD 246

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G I EA+    +M      V+W A I  +F++ + +E  + F+ ++R+    +EF
Sbjct: 247 MYGKCGSIEEARHIFDKM-VDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEF 305

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+S +L AC+   S    +++H  + +  F+      S+L+  Y+KCG+   AERVF + 
Sbjct: 306 TFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKET 365

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              D+ SW S+I  Y+QNG+  +AI  FE +V  G +P + TF+ VLSAC+H+GLV  G 
Sbjct: 366 PQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGL 425

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F S+ ++YG+     HY+C++DLL R+G+ + A   IS + +KP   +W  L   CR 
Sbjct: 426 DYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRI 485

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H +LK+A+  ++ + E++P++ A YVTL+N+YA AG+ ++  + RK M  + + K+PG S
Sbjct: 486 HGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLS 545

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRV 711
           WI +   ++ F   + SH +  ++ E L +L +++++ G             D +KE  +
Sbjct: 546 WIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNL 605

Query: 712 LYHSERLAVGFGLISLPAKNKFECSRTLE 740
            YHSE+LAV FG+IS P     +  + L 
Sbjct: 606 SYHSEKLAVAFGIISTPEGTPIKVFKNLR 634



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 216/465 (46%), Gaps = 46/465 (9%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           ++  C +   L+ G++ H  I  +      F+   L+ MYAKC  +     +  +MP  D
Sbjct: 76  LIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERD 135

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGID----------------------------- 213
           + S N L++GYAK  L  +A S F K+   D                             
Sbjct: 136 LCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKR 195

Query: 214 ---VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
               + N +T S+ LA   ++  +  GK++H   M+    S   V +AL  MY KCG +E
Sbjct: 196 SDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIE 255

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
           +A  +F+ +V R++++WTA+I+ + Q G  ++   L   +   GI PNE+TF+  L +CA
Sbjct: 256 EARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACA 315

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           +  +  +G   H  + + G     F  +A+V MYS  G +  A++  KE  +     SW 
Sbjct: 316 NQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ-PDLFSWT 374

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL-ATCEQIHSRIVK 449
           + IAG+ +N + +EAI  F  +V++    D  T+  +L AC+    +    +  HS   +
Sbjct: 375 SLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQ 434

Query: 450 SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNGR----AR 504
                     + +I+   + G +++AE + S+++   D   W S++     +G      R
Sbjct: 435 YGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQR 494

Query: 505 KAIILFEKMVVEGIRPTN-STFLAVLSACSHSGLVQDGQKVFESM 548
            A  LFE      I P N +T++ + +  + +G+  +  K+ ++M
Sbjct: 495 AAEALFE------IEPENPATYVTLANIYATAGMWSEVAKIRKTM 533



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 65/116 (56%), Gaps = 4/116 (3%)

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
           +  + +EA++   Q+ +  A+     YS+++++C     L   +++H  I  S F   + 
Sbjct: 51  QQNRLKEALQILHQIDKPSAS----VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLF 106

Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
           + + L+E Y KC S  D++++F ++   D+ SWN +I  Y++ G  ++A  LF+KM
Sbjct: 107 ILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKM 162


>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 178/560 (31%), Positives = 304/560 (54%), Gaps = 7/560 (1%)

Query: 111 LESLLDKQFVI----EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
           LE++ D  F      ++L  C+    L  G   H  + K  + G   +   L+++Y K G
Sbjct: 49  LETIDDHSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFG 108

Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFD--QAFSFFLKLDGIDVQPNHYTYSTM 224
            I     +   MP  D+ S N +++   +N  +D       + K+   DV+PNH T++ +
Sbjct: 109 HIHHAHQLFDTMPRRDVVSFNTMISASVRNN-YDALDLVGLYSKMKKEDVKPNHITFAGL 167

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
           +  C  L A+      HA T++    S   V ++L+  Y K   +EDA   F  +++ ++
Sbjct: 168 IGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDL 227

Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           +SW  +I+G  ++   E  +R+   M +  +  + +T T  + +C+   +   G  FH  
Sbjct: 228 VSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGS 287

Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
            IK G+A    +  A++ MYS   +   +  ++       + +SW A I+GF +N++ EE
Sbjct: 288 AIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEE 347

Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
           AI  F +M+R     ++F++SSIL     L +L   +QIH+RI+KS F  ++ V ++LI+
Sbjct: 348 AIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALID 407

Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
            Y+KCGS EDA  VF ++   DVVS  +MI +Y Q+G+ ++A+ +  +M  EG+ P   T
Sbjct: 408 MYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVT 467

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           FL  L ACSH GLV++G +VF+ M++++ + P+  H++C+VD+LGRAG+L  A  FI  +
Sbjct: 468 FLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEM 527

Query: 585 PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAE 644
            I+    +W  L  ACR H ++ + E  +++I+EL P     YV L+N+YAE G   D  
Sbjct: 528 GIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKV 587

Query: 645 EQRKLMKMKEISKEPGCSWI 664
             R+ +    + K+ GCSW+
Sbjct: 588 MVREKLVSHGLKKQVGCSWV 607


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 298/553 (53%), Gaps = 2/553 (0%)

Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
           +D    I  L  C     L  GR+ H LI ++ V     V  SL++MY K G     + V
Sbjct: 157 MDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKV 216

Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
             ++   DI S N + AG ++     +   FF KL    ++PN  T+S +   CG    +
Sbjct: 217 FDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDL 276

Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
             G Q H    +     + +V+++L+ M+ +CG M  A  VF+    +++ +   +I+G+
Sbjct: 277 VSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGY 336

Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
             +    + L L C +   G++ +E TF+ AL +C    N  +G   H  ++K G A   
Sbjct: 337 NLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQG 396

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +V ++++  Y G G + ++ +    + +    VSW A I+       + EAI   +++  
Sbjct: 397 YVCSSLLKCYVGFGLLDDSFEFFNGV-ERLDLVSWGAMISALVHKGYSSEAIGLLNRLKE 455

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                DEF + SI   C+ + +    + +HS +VK  +E++V V S++I+AY KCG  E+
Sbjct: 456 AGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIEN 515

Query: 475 AERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           A RVF Q +   DV+ +N+M+ AY+ +G  R+A+  FEKM +  + P+ +TF++V+SACS
Sbjct: 516 ARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACS 575

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           H GLV+ G   F+SM  +YG+ P   +Y C+VDL  R G LE A   I  +P  P   IW
Sbjct: 576 HLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIW 635

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           R L   CR H + ++ E+ +K++L+L P++ A YV LS +Y+E G  +DA + RK M  +
Sbjct: 636 RSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIER 695

Query: 654 EISKEPGCSWIEV 666
            + K+PGCSWIE+
Sbjct: 696 GLWKDPGCSWIEI 708



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 208/447 (46%), Gaps = 8/447 (1%)

Query: 134 ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGY 193
           ELG   H    K  +  + FV +S++NMYAK GDI+    V + M  L +   N ++ GY
Sbjct: 75  ELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGY 134

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+ +   ++      +    +  + +T+   L  C  +  ++ G+Q+H   ++ +    T
Sbjct: 135 AQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFST 194

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
           AV N+L+ MY K G    A  VF+ L  +++ISW  +  G  Q  D  +  R    +   
Sbjct: 195 AVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLT 254

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
           G+ PN  TF++    C    +   G  FH    + G++    V +++++M+S  G +  A
Sbjct: 255 GLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMA 314

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
                +     S  + N  I+G+  N    EA+  F  +       DE T+SS L+AC  
Sbjct: 315 CLVF-DSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFR 373

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
             +     Q+H  IVKS F S  +V SSL++ Y   G  +D+   F+ +   D+VSW +M
Sbjct: 374 TENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAM 433

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           I A    G + +AI L  ++   G +P    F ++ + C+     +  + V   +VK   
Sbjct: 434 ISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVK--- 490

Query: 554 ILPEEAHY---SCMVDLLGRAGKLEIA 577
            +  EAH    S ++D   + G +E A
Sbjct: 491 -MGYEAHVFVASAVIDAYAKCGDIENA 516



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 175/390 (44%), Gaps = 1/390 (0%)

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MY KCG +   + V  +MP  ++ S   +++G  +N  F+     +L++    + PN + 
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
              +   C +L   + G  +H   +K+       V +++L MY K G +EDAE VFE + 
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
              V  W A+I G+ Q     + L++V +M+  GI  + +TF  AL  C  + N + G  
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            H  +I+  +     V  +++DMY   G    A K    + +    +SWN   AG  +  
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRL-QDKDIISWNTVFAGLSQGD 239

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
              E    F +++      +  T+S + + C     L +  Q H    +        V S
Sbjct: 240 DAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTS 299

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           SLI  +++CG+   A  VF       + + N MI  Y+ N    +A+ LF  +   G+  
Sbjct: 300 SLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEA 359

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
              TF + L AC  +   + G+++  ++VK
Sbjct: 360 DECTFSSALEACFRTENQKLGRQMHGTIVK 389


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 177/535 (33%), Positives = 293/535 (54%), Gaps = 2/535 (0%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  GR+ H LI ++ V     V  SL++MY K G     + V  ++   DI S N + AG
Sbjct: 199 LNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAG 258

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
            ++     +   FF KL    ++PN  T+S +   CG    +  G Q H    +     +
Sbjct: 259 LSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDE 318

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
            +V+++L+ M+ +CG M  A  VF+    +++ +   +I+G+  +    + L L C +  
Sbjct: 319 ASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNG 378

Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
            G++ +E TF+ AL +C    N  +G   H  ++K G A   +V ++++  Y G G + +
Sbjct: 379 LGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDD 438

Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
           + +    + +    VSW A I+       + EAI   +++       DEF + SI   C+
Sbjct: 439 SFEFFNGV-ERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCA 497

Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWN 491
            + +    + +HS +VK  +E++V V S++I+AY KCG  E+A RVF Q +   DV+ +N
Sbjct: 498 GIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFN 557

Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
           +M+ AY+ +G  R+A+  FEKM +  + P+ +TF++V+SACSH GLV+ G   F+SM  +
Sbjct: 558 TMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLD 617

Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
           YG+ P   +Y C+VDL  R G LE A   I  +P  P   IWR L   CR H + ++ E+
Sbjct: 618 YGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEW 677

Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
            +K++L+L P++ A YV LS +Y+E G  +DA + RK M  + + K+PGCSWIE+
Sbjct: 678 AAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWIEI 732



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 216/463 (46%), Gaps = 14/463 (3%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L++ +  +C+ LG + HA I K   C D F   +L+ MY KCG +   + V  +MP  ++
Sbjct: 83  LTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNL 142

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSA------IDEG 237
            S   +++G  +N  F+     +L++    + PN +    +   C +L        ++ G
Sbjct: 143 VSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFG 202

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           +Q+H   ++ +    TAV N+L+ MY K G    A  VF+ L  +++ISW  +  G  Q 
Sbjct: 203 RQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQG 262

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
            D  +  R    +   G+ PN  TF++    C    +   G  FH    + G++    V 
Sbjct: 263 DDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVT 322

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
           +++++M+S  G +  A     +     S  + N  I+G+  N    EA+  F  +     
Sbjct: 323 SSLINMFSRCGAMRMACLVF-DSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGL 381

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             DE T+SS L+AC    +     Q+H  IVKS F S  +V SSL++ Y   G  +D+  
Sbjct: 382 EADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFE 441

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
            F+ +   D+VSW +MI A    G + +AI L  ++   G +P    F ++ + C+    
Sbjct: 442 FFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAA 501

Query: 538 VQDGQKVFESMVKEYGILPEEAHY---SCMVDLLGRAGKLEIA 577
            +  + V   +VK    +  EAH    S ++D   + G +E A
Sbjct: 502 YRQTKSVHSLVVK----MGYEAHVFVASAVIDAYAKCGDIENA 540



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 201/435 (46%), Gaps = 11/435 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +  +C     L  G ++H L  +  +  +  VT+SL+NM+++CG ++    V    P+  
Sbjct: 290 LFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKS 349

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I +CN +++GY  N    +A + F  L+G+ ++ +  T+S+ L  C        G+Q+H 
Sbjct: 350 IHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHG 409

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +K  + S+  V ++LL  Y+  G+++D+   F G+ + +++SW A+I+     G   +
Sbjct: 410 TIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSE 469

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            + L+  ++E G  P+E+ F      CA +         H+ V+K G     FV +A++D
Sbjct: 470 AIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVID 529

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
            Y+  G+I  A++   +  +    + +N  +  +  +    EA+E F +M        + 
Sbjct: 530 AYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQA 589

Query: 423 TYSSILKACSLLPSLATCEQ----IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
           T+ S++ ACS    L   EQ      S  +    + +      L++ +++ G  EDA+ +
Sbjct: 590 TFVSVISACS---HLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHI 646

Query: 479 FSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSG 536
              +      + W S++     +G         +K++   + P N     +LS   S  G
Sbjct: 647 IETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQ--LVPENDAAYVLLSKVYSEEG 704

Query: 537 LVQDGQKVFESMVKE 551
              D  KV + M++ 
Sbjct: 705 SWSDAAKVRKGMIER 719



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 7/335 (2%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           ST L    +   I  G Q+HAQ +KL + +     N L+ MY KCG +     VF  +  
Sbjct: 80  STALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPM 139

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL------RNS 335
           +N++SWT +++G  Q+G++E  L +   M   G+ PNE+       +CA+L       N 
Sbjct: 140 KNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNL 199

Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           + G   H  +I+  +     V  +++DMY   G    A K    + +    +SWN   AG
Sbjct: 200 NFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRL-QDKDIISWNTVFAG 258

Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
             +     E    F +++      +  T+S + + C     L +  Q H    +      
Sbjct: 259 LSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDE 318

Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
             V SSLI  +++CG+   A  VF       + + N MI  Y+ N    +A+ LF  +  
Sbjct: 319 ASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNG 378

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
            G+     TF + L AC  +   + G+++  ++VK
Sbjct: 379 LGLEADECTFSSALEACFRTENQKLGRQMHGTIVK 413


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 187/622 (30%), Positives = 336/622 (54%), Gaps = 49/622 (7%)

Query: 129 REECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNC 188
           R  C+E  R+    I       D F    ++++YA+ GD+ +   V  +MP   + S   
Sbjct: 4   RLGCVERARQIFDAIADR----DSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTA 59

Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
           LL+ +A +   ++A + F  +   D+      ++ ML +  + S I++ K    Q  +  
Sbjct: 60  LLSAFALSGHHEEAKTLFDTMQERDL----IAWTIMLTVLATFSNIEDAKYHFDQMPERD 115

Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
            ++ TA    +L    + G ME+A   F+ + +RN+ SWT++++ + + GD +   R+  
Sbjct: 116 LVAWTA----MLAANAERGQMENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAGRVFD 171

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG-----DFVG-TAIVD 362
            M E     N   +T  L           GY     V++   A       D +  TA++ 
Sbjct: 172 SMPE----WNLVAWTAMLT----------GYSLSGDVVRAKRAFDSMPERDLIAWTAMLS 217

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--- 419
            Y+  G +   ++  + M +    +SW   +A    N   EE+ E F +M R+ A     
Sbjct: 218 AYAFNGHLRYTREIFQRMPER-DLISWATMVAALVENDLLEESKELFDRMPRHCALSKGM 276

Query: 420 --DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER 477
             +  T+ ++L ACS L +LA   +IH+ + +  F++++ V ++L+  Y +CG+  DA+ 
Sbjct: 277 TPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKI 336

Query: 478 VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL 537
           VF  +   DV+SW+SMI A++Q GR  +A+ L+ +M+ EG  P +  F++VL ACS+SG+
Sbjct: 337 VFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGV 396

Query: 538 VQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLF 597
           V+     F S+V +  + P   HY+CMVD+LGRAGKL  A   +  +P  P   ++  + 
Sbjct: 397 VEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTML 456

Query: 598 AACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
           +AC+ ++D++  E  ++ + ELDP++++ Y+TL+N+Y+ A    DA   RKLM+ + I K
Sbjct: 457 SACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKK 516

Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH-----------TDNE 706
           +PGCSWIEV ++++ F + +K H +  ++Y ++++L +Q+++ G+            ++E
Sbjct: 517 KPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDE 576

Query: 707 KEDRVLYHSERLAVGFGLISLP 728
           KE+ + YHSE+LA+ FGLIS P
Sbjct: 577 KENLLWYHSEKLAIAFGLISTP 598



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 147/360 (40%), Gaps = 56/360 (15%)

Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
           M+ + G +E A  +F+ +  R+  SW  +++ + + GD      +   M    +    +T
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSL--GSWT 58

Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEM 380
              AL S  +L   H      A+ +   M   D +  T ++ + +    I +AK    +M
Sbjct: 59  ---ALLSAFALSGHHE----EAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQM 111

Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
            +    V+W A +A      + E A E F QM   +     F+++S+L A      +   
Sbjct: 112 PER-DLVAWTAMLAANAERGQMENARETFDQMPERNL----FSWTSLLSAYGRSGDVKAA 166

Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
                R+  S  E N+   ++++  Y+  G    A+R F  +   D+++W +M+ AY+ N
Sbjct: 167 ----GRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFN 222

Query: 501 GRARKAIILFEKM------------------------------------VVEGIRPTNST 524
           G  R    +F++M                                    + +G+ P   T
Sbjct: 223 GHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVT 282

Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
           F+ +L ACS  G + +G+K+  + V E G   +    + +V+  GR G L  A I    +
Sbjct: 283 FITLLDACSFLGALAEGRKI-HAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGM 341



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 1/157 (0%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           I +L  CS    L  GR+ HA + +     D  V+ +LVN Y +CG +     V   M  
Sbjct: 284 ITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRR 343

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
            D+ S + +++ +A+    D+A   + ++      P+   + ++L  C +   ++     
Sbjct: 344 RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDF 403

Query: 241 HAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVF 276
               +    +  T    A ++ +  + G + DAE + 
Sbjct: 404 FRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLL 440


>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 611

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 185/568 (32%), Positives = 299/568 (52%), Gaps = 7/568 (1%)

Query: 152 QFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
             +  +L+  Y + G ++   ++  +MP  D+ +   ++ GYA +     A+  F ++  
Sbjct: 45  HILATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFK 104

Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM-ME 270
               PN +T S++L  C ++  +  G  +H   +KL       V NAL+ MY  C + ME
Sbjct: 105 QGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTME 164

Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
            A  +F  +  +N ++WT +I GF   GD    L++   M  +  D   Y  T+A+ + A
Sbjct: 165 AAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASA 224

Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
           S+ +   G   HA V+KRG      V  +I+D Y   G + EAK+   EM +    ++WN
Sbjct: 225 SIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEM-EDKDLITWN 283

Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
             I+   R+  +E A+  F +        + +T++S++ AC+ + +L   +Q+H RI + 
Sbjct: 284 TLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRR 342

Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAIIL 509
            F  NV + ++LI+ Y KCG   D+ERVF ++    ++VSW SM+  Y  +G   +A+ L
Sbjct: 343 GFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVEL 402

Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
           F+KMV  GIRP    F+AVLSAC H+GLV+ G K F  M  EYGI P+   Y+C+VDLLG
Sbjct: 403 FDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLG 462

Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM-AEFISKQILELDPDDAAVYV 628
           RAGK+  A   +  +P KP    W  +  AC+ H    + +   +K+++EL P     YV
Sbjct: 463 RAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYV 522

Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
            LS +YA  G   +    RK+M+M    KE G SWIEV N+++ F   +K       VY 
Sbjct: 523 MLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYS 582

Query: 689 KLKQLMQQIEDIGHTDNEKEDRVLYHSE 716
            L  L+++ ++ G+  +   D ++Y  E
Sbjct: 583 VLGLLIEETKEAGYVPD--LDSLVYDQE 608



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 201/444 (45%), Gaps = 47/444 (10%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMVAVVKQMPYL 181
           VL  C   + L  G   H ++ K  + G  +V  +L+NMYA C   +++   + + +   
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVK 176

Query: 182 DIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
           +  +   L+ G+            +  + L+  DV P  Y  +  +    S+ ++  GKQ
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTP--YCITIAVRASASIDSVTTGKQ 234

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           +HA  +K  + S   V N++L  Y +CG + +A+  F  +  +++I+W  +I+   +  D
Sbjct: 235 IHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISEL-ERSD 293

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
             + L +       G  PN YTFT  +A+CA++   + G   H ++ +RG      +  A
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANA 353

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           ++DMY+  G+I ++++   E+ +  + VSW + + G+  +    EA+E F +MV +    
Sbjct: 354 LIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRP 413

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
           D   + ++L AC                         H G  L+E   K  +  ++E   
Sbjct: 414 DRIVFMAVLSACR------------------------HAG--LVEKGLKYFNVMESEYGI 447

Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC---SHSG 536
           +     D   +N ++    + G+  +A  L E+M     +P  ST+ A+L AC    H+G
Sbjct: 448 N----PDRDIYNCVVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKAHKHTG 500

Query: 537 LVQD--GQKVFE---SMVKEYGIL 555
           L+     +KV E    MV  Y +L
Sbjct: 501 LISRLAAKKVMELKPRMVGTYVML 524


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 180/531 (33%), Positives = 292/531 (54%), Gaps = 16/531 (3%)

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL---TMYIKCGMMEDAESVFEGLVQ 281
           L++    ++++E KQ+ A T+K    S  +V   L+   T+      M+ A  +F+ ++ 
Sbjct: 33  LSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           +++I +  +  G+ +         L   +   G+ P++YTF+  L +CAS +    G   
Sbjct: 93  KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   +K G+    ++   +++MY+   ++  A+    EM +    VS+NA I G+ R+ +
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM-EQPCIVSYNAIITGYARSSQ 211

Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
             EA+  F ++  ++    + T  S++ +C+LL +L   + IH  + K  F+  V V ++
Sbjct: 212 PNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTA 271

Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           LI+ + KCGS  DA  +F  +   D  +W++MI A++ +G   KAI +FE+M  EG+RP 
Sbjct: 272 LIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPD 331

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
             TFL +L ACSH+GLV+ G+  F SM K YGI P   HY CMVDLLGRAG L+ A  F+
Sbjct: 332 EITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFV 391

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             L IK T  +WR L +AC  H +++MA+ + ++I ELD      YV LSN+YA  G   
Sbjct: 392 DKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWE 451

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           D    RKLMK + + K PGCS +EV N ++ FFS +  H    ++   L +LM++I+ +G
Sbjct: 452 DVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVG 511

Query: 702 ---------HTDNEKEDRVL---YHSERLAVGFGLISLPAKNKFECSRTLE 740
                    H D E+E + L   YHSE+LA+ FGL++ P       ++ L 
Sbjct: 512 YVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLR 562



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 175/394 (44%), Gaps = 55/394 (13%)

Query: 100 CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLV 159
           CS  +P   Y+  SLL           C+  + L  G   H    K  +  + ++  +L+
Sbjct: 123 CSGLLPDD-YTFSSLLKA---------CASSKALREGMGLHCFAVKLGLNHNIYICPTLI 172

Query: 160 NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHY 219
           NMYA+C D+ +   V  +M    I S N ++ GYA+++  ++A S F +L   +++P   
Sbjct: 173 NMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDV 232

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
           T  +++  C  L A+D GK +H    K  +     V+ AL+ M+ KCG + DA S+FEG+
Sbjct: 233 TMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM 292

Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHM 337
             R+  +W+A+I  F  HGD  K + +   M+ +G+ P+E TF   L +C  A L     
Sbjct: 293 RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGR 352

Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
           GY F++     G+  G      +VD+    G + EA   + ++   A+ + W        
Sbjct: 353 GY-FYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWR------- 404

Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNV 456
                                       ++L ACS   ++    ++  R+++  FE  + 
Sbjct: 405 ----------------------------TLLSACSTHGNV----EMAKRVIERIFELDDA 432

Query: 457 HVGSSLI--EAYNKCGSWEDAERVFSQLTAADVV 488
           H G  +I    Y + G WED   +   +    VV
Sbjct: 433 HGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVV 466



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 173/397 (43%), Gaps = 42/397 (10%)

Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           DI   N +  GYA++     AFS F +L    + P+ YT+S++L  C S  A+ EG  LH
Sbjct: 94  DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLH 153

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
              +KL       +   L+ MY +C  M  A  VF+ + Q  ++S+ AII G+ +     
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPN 213

Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
           + L L   ++   I+P + T    + SCA L    +G   H  V K+G      V TA++
Sbjct: 214 EALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALI 273

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
           DM++  G + +A    + M +   + +W+A I  F  +    +AI  F +M R     DE
Sbjct: 274 DMFAKCGSLTDAISIFEGM-RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDE 332

Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
            T+  +L ACS                        H G  L+E     G +    + +  
Sbjct: 333 ITFLGLLYACS------------------------HAG--LVEQGR--GYFYSMSKTYG- 363

Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
                +  +  M+    + G   +A    +K+    I+ T   +  +LSACS  G V+  
Sbjct: 364 -ITPGIKHYGCMVDLLGRAGHLDEAYNFVDKL---EIKATPILWRTLLSACSTHGNVEMA 419

Query: 542 QKVFESMVKEYGILPEEAH---YSCMVDLLGRAGKLE 575
           ++V E + +      ++AH   Y  + +L  R G+ E
Sbjct: 420 KRVIERIFE-----LDDAHGGDYVILSNLYARVGRWE 451


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 193/640 (30%), Positives = 338/640 (52%), Gaps = 22/640 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHAL--ITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           D + +  +LS C+    L    R HAL  ++ +A C    +++ L   YA+ GD+ +  +
Sbjct: 2   DPRRLRRLLSSCAALRTLT---RLHALLIVSSSASC-HHILSSCLATAYARAGDLAAAES 57

Query: 174 VVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
            +   P     I + N LLA +++ A   +A   F  L     +P+  T++  L+ C  L
Sbjct: 58  TLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALPPA-ARPDSTTFTLALSACARL 116

Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
             +  G+ +  +     Y +   V +++L +Y KCG M+DA  VF+ + +R+ ++W+ ++
Sbjct: 117 GDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMV 176

Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
            GF   G   + + +   MR DG++ +E      + +CA+  ++ MG   H  +++  M 
Sbjct: 177 TGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQ 236

Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
           +   + T++VDMY+  G +++  +++ E+    + VSW+A I+   +    +EA+  F  
Sbjct: 237 MDVVISTSLVDMYAKNG-LFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRM 295

Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
           M  +    +       L ACS L  L   + IH  I+++  E +  VG+++I+ Y+KCGS
Sbjct: 296 MQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGS 354

Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
              A+ +F ++ + D++SWN MI     +GR R A+ LF++M    +RP ++TF ++LSA
Sbjct: 355 LSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSA 414

Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
            SHSGLV++G+  F  MV EYGI P E H  C+VDLL R+G +E A   +++L  KPT  
Sbjct: 415 LSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTIS 474

Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
           I   L + C  ++ L++ E  +++ILEL P D  V   +SN+YA A       E RKLMK
Sbjct: 475 ILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKLMK 534

Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-------- 703
                K PGCS IE+   ++ F  +++SH +  ++ + + +L  ++  +G+         
Sbjct: 535 DHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFVYH 594

Query: 704 ---DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
              +  KE  +  HSERLA  FGL++     +    + L 
Sbjct: 595 DLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLR 634


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 177/503 (35%), Positives = 285/503 (56%), Gaps = 18/503 (3%)

Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
           ++  L+ M+ +   +++A  VF+   +R +  W A+       G     L L   M   G
Sbjct: 106 LATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMG 165

Query: 315 IDPNEYTFTVALASCAS----LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
           +  + +T+T  L +C +    +     G   HA +++ G      V T ++DMY+  G +
Sbjct: 166 VSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCV 225

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN--DAACDEFTYSSIL 428
             A     EM    + VSW+A IA + +N K  EA+E F +M+ N  D+  +  T  S+L
Sbjct: 226 SYASAVFDEM-PVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVL 284

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
           +AC+   +L   + IH+ I++   +S + V S+LI  Y +CG  E  + +F ++   DVV
Sbjct: 285 QACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVV 344

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
            WNS+I +Y  +G  RKAI +FE+M+  G  P++ +F++VL ACSH+GLV++G+K+FESM
Sbjct: 345 LWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESM 404

Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
           VKE+GI P   HY+CMVDLLGRA +L+ A   I +L I+P   +W  L  ACR H  +++
Sbjct: 405 VKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVEL 464

Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           AE  SK++ +L+P +A  YV L+++YAEA +  + +  +KL+  +E+ K PG SWIEV  
Sbjct: 465 AERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRR 524

Query: 669 KIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSER 717
           KIY F S ++ + +  +++  L  L  +++  G+T             EKE  VL HSE+
Sbjct: 525 KIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEK 584

Query: 718 LAVGFGLISLPAKNKFECSRTLE 740
           LAV FGLI+    +    ++ L 
Sbjct: 585 LAVAFGLINTSKGDTIRITKNLR 607



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 138/285 (48%), Gaps = 17/285 (5%)

Query: 123 VLSYCSREECL----ELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           +L  C   ECL    + G+  HA I +        V  +L++MYA+ G +    AV  +M
Sbjct: 176 LLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEM 235

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
           P  ++ S + ++A YAKN    +A   F  + L+  D  PN  T  ++L  C + +A+++
Sbjct: 236 PVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQ 295

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           GK +HA  ++    S   V +AL+TMY +CG +E  + +F+ + +++V+ W ++I+ +  
Sbjct: 296 GKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGL 355

Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGM 350
           HG   K +++   M + G  P+  +F   L +C     SH G       +F + V + G+
Sbjct: 356 HGYGRKAIKIFEEMIDHGFSPSHISFISVLGAC-----SHTGLVEEGKKLFESMVKEHGI 410

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
                    +VD+      + EA K ++++        W + +  
Sbjct: 411 QPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGA 455



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/380 (22%), Positives = 174/380 (45%), Gaps = 15/380 (3%)

Query: 128 SREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCN 187
           +R   L      H L+       D F+   L+NM+++   + +   V  +     I   N
Sbjct: 80  ARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWN 139

Query: 188 CLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS----LSAIDEGKQLHAQ 243
            L    A     +     + +++ + V  + +TY+ +L  C +    +S + +GK++HA 
Sbjct: 140 ALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAH 199

Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
            ++  Y +   V   L+ MY + G +  A +VF+ +  +NV+SW+A+I  + ++G   KP
Sbjct: 200 ILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNG---KP 256

Query: 304 LRLVCLMREDGID-----PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
              + L RE  ++     PN  T    L +CA+      G + HA +++RG+     V +
Sbjct: 257 YEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVIS 316

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MY+  G++   +     M K    V WN+ I+ +  +    +AI+ F +M+ +  +
Sbjct: 317 ALITMYARCGKLESGQLIFDRMHKK-DVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFS 375

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSK-FESNVHVGSSLIEAYNKCGSWEDAER 477
               ++ S+L ACS    +   +++   +VK    + +V   + +++   +    ++A +
Sbjct: 376 PSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAK 435

Query: 478 VFSQL-TAADVVSWNSMIKA 496
           +   L        W S++ A
Sbjct: 436 IIEDLRIEPGPKVWGSLLGA 455



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 85/180 (47%), Gaps = 2/180 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VL  C+    LE G+  HA I +  +     V ++L+ MYA+CG ++S   +  +M 
Sbjct: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
             D+   N L++ Y  +    +A   F ++      P+H ++ ++L  C     ++EGK+
Sbjct: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 399

Query: 240 LHAQTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
           L    +K   +  +    A ++ +  +   +++A  + E L ++     W +++   + H
Sbjct: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 179/586 (30%), Positives = 319/586 (54%), Gaps = 11/586 (1%)

Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
           ++LS   + +   L ++ HA +   ++    F+ + ++++     D+     V  Q+   
Sbjct: 35  KLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLK----DLAYASLVFNQLTKP 90

Query: 182 DIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           +I + N +L G A     +D     + KL  + ++ N++TY  +   CG++  +  GK  
Sbjct: 91  NIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIG 150

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H    K        V+++L+TMY +CG M  A  VF+ +  R+++SW ++I+G+ + G  
Sbjct: 151 HCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFT 210

Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
           ++ + L   MRE+G +P+E T    L +C  L +  +G      V+++ M +  ++G+A+
Sbjct: 211 KEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSAL 270

Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
           +DMY   G++  A++    M  +   V+WNA I G+ +N  + EAI  F+ M       D
Sbjct: 271 IDMYGKCGDLISARRVFDSM-PNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPD 329

Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
             T   +L ACS + +L   + + +   +   + +V+V S+LI+ Y KCGS +DA RVF 
Sbjct: 330 RVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFE 389

Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNSTFLAVLSACSHSGLV 538
            +   + VSWN+MI A + +G+A++A+ LF +M  +   ++P + TF+ VLSAC H+GLV
Sbjct: 390 SMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLV 449

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
            +G+++FESM   +G++P+  HYSCMVDL  RAG L  A   I  +P KP   +   L  
Sbjct: 450 DEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLG 509

Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
           AC+   +  + E + +  LE++  ++  YV  S +YA      D+ + R LM+   +SK 
Sbjct: 510 ACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKT 569

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ---IEDIG 701
           PGCSWI++   ++ F + +  H+    +Y+ L + M++   I +IG
Sbjct: 570 PGCSWIDIGAHVHEFHAGDSLHNHSMNIYQLLNEEMKREGYIPNIG 615



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 149/305 (48%), Gaps = 10/305 (3%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  ++ VL  C     L LGR     + +  +  + ++ ++L++MY KCGD+ S   V 
Sbjct: 228 DEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVF 287

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             MP  D+ + N ++ GYA+N   ++A   F  +      P+  T   +L+ C ++ A+D
Sbjct: 288 DSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALD 347

Query: 236 EGK--QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
            GK  + HA    LQ+     V++AL+ MY KCG ++DA  VFE +  +N +SW A+I+ 
Sbjct: 348 LGKWVETHASEKGLQH--DVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISA 405

Query: 294 FKQHGDYEKPLRLVCLMREDG--IDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGM 350
              HG  ++ L L   M +D   + PN+ TF   L++C        G  +F +  +  G+
Sbjct: 406 LAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGL 465

Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT---EEAIE 407
                  + +VD+ +  G ++EA   +K+M      +   + +    R +     E  I+
Sbjct: 466 VPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQ 525

Query: 408 AFSQM 412
            F +M
Sbjct: 526 LFLEM 530


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 173/519 (33%), Positives = 297/519 (57%), Gaps = 17/519 (3%)

Query: 224 MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN 283
           +L +C    +   G+  HAQ +++        SN L+ MY KC +++ A   F  +  ++
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHA 343
           ++SW  +I    Q+ +  + L+L+  M+ +G   NE+T +  L +CA           HA
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 344 QVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
             IK  +    FVGTA++ +Y+    I +A +  + M +  ++V+W++ +AG+ +N   E
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEK-NAVTWSSMMAGYVQNGFHE 227

Query: 404 EAIEAF--SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
           EA+  F  +Q++  D   D F  SS + AC+ L +L   +Q+H+   KS F SN++V SS
Sbjct: 228 EALLIFRNAQLMGFDQ--DPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSS 285

Query: 462 LIEAYNKCGSWEDAERVFSQ-LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           LI+ Y KCG   +A  VF   L    +V WN+MI  ++++ RA +A+ILFEKM   G  P
Sbjct: 286 LIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFP 345

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
            + T++ VL+ACSH GL ++GQK F+ MV+++ + P   HYSCM+D+LGRAG +  A   
Sbjct: 346 DDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDL 405

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  +P   T+ +W  L A+C+ + +++ AE  +K + E++P++A  ++ L+N+YA     
Sbjct: 406 IERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKW 465

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
            +    RKL++  ++ KE G SWIE+ NKI+ F    ++H ++  +Y KL  L+ +++ +
Sbjct: 466 DEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKL 525

Query: 701 GHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
            +            +N K+  + +HSE+LA+ FGL+ LP
Sbjct: 526 NYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLP 564



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 158/310 (50%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C++      GR  HA I +  +  D   +  L+NMY+KC  + S      +MP   
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N ++    +NA   +A    +++       N +T S++L  C    AI E  QLHA
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
            ++K    S   V  ALL +Y KC  ++DA  +FE + ++N ++W++++ G+ Q+G +E+
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            L +    +  G D + +  + A+++CA L     G   HA   K G     +V ++++D
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY+  G I EA    + + +  S V WNA I+GF R+ +  EA+  F +M +     D+ 
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 423 TYSSILKACS 432
           TY  +L ACS
Sbjct: 349 TYVCVLNACS 358



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 181/368 (49%), Gaps = 29/368 (7%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C+  EC++L    HA   K A+  + FV  +L+++YAKC  IK    + + MP  +  + 
Sbjct: 158 CAILECMQL----HAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTW 213

Query: 187 NCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQT 244
           + ++AGY +N   ++A   F   +L G D  P  +  S+ ++ C  L+ + EGKQ+HA +
Sbjct: 214 SSMMAGYVQNGFHEEALLIFRNAQLMGFDQDP--FMISSAVSACAGLATLIEGKQVHAIS 271

Query: 245 MKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-RNVISWTAIINGFKQHGDYEKP 303
            K  + S   VS++L+ MY KCG + +A  VF+G+++ R+++ W A+I+GF +H    + 
Sbjct: 272 HKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEA 331

Query: 304 LRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRGMALGDFVG 357
           + L   M++ G  P++ T+   L +C     SHMG        F   V +  ++      
Sbjct: 332 MILFEKMQQRGFFPDDVTYVCVLNAC-----SHMGLHEEGQKYFDLMVRQHNLSPSVLHY 386

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG---FFRNQKTEEAIEAFSQMVR 414
           + ++D+    G + +A   ++ M  +A+S  W + +A    +   +  E A +   +M  
Sbjct: 387 SCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEP 446

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
           N+A       + IL A     +    E   +R +  + +     G+S IE  NK  S+  
Sbjct: 447 NNAG------NHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTV 500

Query: 475 AERVFSQL 482
            ER   Q+
Sbjct: 501 GERNHPQI 508



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 92/189 (48%), Gaps = 3/189 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   +   +S C+    L  G++ HA+  K+    + +V++SL++MYAKCG I+    V 
Sbjct: 244 DPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVF 303

Query: 176 KQ-MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           +  +    I   N +++G+A++A   +A   F K+      P+  TY  +L  C  +   
Sbjct: 304 QGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLH 363

Query: 235 DEGKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIIN 292
           +EG++     ++   LS + +  + ++ +  + G++  A  + E +      S W +++ 
Sbjct: 364 EEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLA 423

Query: 293 GFKQHGDYE 301
             K +G+ E
Sbjct: 424 SCKIYGNIE 432


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  321 bits (822), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 185/616 (30%), Positives = 331/616 (53%), Gaps = 16/616 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    LE G + HA I +  +  +  V  +L++MYA+CG + +   V   +   +
Sbjct: 259 ILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPN 318

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S N ++AGY +    ++AF  F  +     QP+ +TY+++LAIC   + ++ GK+LH+
Sbjct: 319 RVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHS 377

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
           Q ++  + +   V+ AL++MY KCG +E+A  VF  + ++N +SW A I    +HG  ++
Sbjct: 378 QIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKE 437

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
             ++   MR D + P+  TF   L SC S  +   G   H ++ + GM   + V  A++ 
Sbjct: 438 AFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALIS 497

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MY   G++ +A++    + +     SWNA IA + ++     A + F +        D++
Sbjct: 498 MYGRCGKLADAREVFYRIRRRDLG-SWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKY 556

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T+ ++L+A + L  L    +IH  + K+  E ++ + ++LI+ Y+KCGS  DA  VF  +
Sbjct: 557 TFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNV 616

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DVV WN+M+ AY+ +   + A+ LF++M +EG+ P ++T+ +VL+AC+  G ++ G+
Sbjct: 617 QEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGK 676

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
           K F + +KE  +  +  HY+CMV  LGRA  L+ A  FI  +  +  A +W  L  ACR 
Sbjct: 677 K-FHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRI 735

Query: 603 HSDLKMAEFISKQILELDPDDA-AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
           H ++ +AE   + +L++    + AV   L N+YA AG   D    +  M+   +     C
Sbjct: 736 HHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSC 795

Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH--------TDNEKEDRVLY 713
           + IEV ++ + F + +   S    V +K+++L+ ++ D G          D+ +++R+  
Sbjct: 796 T-IEVNSEFHTFMTNH--FSPQIGVEDKIEELVWKMMDKGFLLDPHYAPNDSREKERLFS 852

Query: 714 H-SERLAVGFGLISLP 728
           H  E LAV +GL   P
Sbjct: 853 HCPELLAVAYGLEHTP 868



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 250/456 (54%), Gaps = 3/456 (0%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           F    L  C + + L  G++ H  +       D ++   L++MY+KCG I+    V + M
Sbjct: 53  FYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSM 112

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
              D+ S N +++GYA +    +A   F ++    ++PN  ++ ++L+ C +   ++ G+
Sbjct: 113 EDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGE 172

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
           Q+H+   K  Y S   VS AL+ MY KCG +E A  VF  + +RNV+SWTA+I+G+ QHG
Sbjct: 173 QIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 232

Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
           D ++   L   +   G  PN+ +F   L +C +  +   G   HA + + G+     VG 
Sbjct: 233 DSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGN 292

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
           A++ MY+  G +  A++    + +S + VSWNA IAG+      EEA   F  M +    
Sbjct: 293 ALISMYARCGSLANARQVFDNL-RSPNRVSWNAMIAGYGEG-FMEEAFRLFRDMQQKGFQ 350

Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
            D FTY+S+L  C+    L   +++HS+IV++ +E++V V ++LI  Y KCGS E+A +V
Sbjct: 351 PDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKV 410

Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
           F+Q+   + VSWN+ I    ++G  ++A  +F++M  + + P + TF+ +L++C+     
Sbjct: 411 FNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDF 470

Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
           + G+ +    + ++G+L      + ++ + GR GKL
Sbjct: 471 ERGRYI-HGKIDQWGMLSNNLVANALISMYGRCGKL 505



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 220/420 (52%), Gaps = 5/420 (1%)

Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
           VQ N   Y+  L  C    ++ EGK++H      Q+     ++N L++MY KCG +EDA 
Sbjct: 47  VQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDAN 106

Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
           +VF+ +  ++V+SW A+I+G+  HG  ++ + L   M+ +G+ PN+ +F   L++C +  
Sbjct: 107 NVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPI 166

Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
               G   H+ + K G      V TA+++MY   G +  A+K   EM +  + VSW A I
Sbjct: 167 VLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEM-RERNVVSWTAMI 225

Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
           +G+ ++  ++EA   F +++R+    ++ +++SIL AC+    L    ++H+ I ++  E
Sbjct: 226 SGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLE 285

Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
             V VG++LI  Y +CGS  +A +VF  L + + VSWN+MI  Y + G   +A  LF  M
Sbjct: 286 QEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDM 344

Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
             +G +P   T+ ++L+ C+    +  G+++   +V+      +    + ++ +  + G 
Sbjct: 345 QQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT-AWEADVTVATALISMYAKCGS 403

Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP-DDAAVYVTLSN 632
           LE A    + +P K  A  W    A C  H   K A  + KQ+   D   D   ++TL N
Sbjct: 404 LEEARKVFNQMPEK-NAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLN 462



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 193/382 (50%), Gaps = 2/382 (0%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+     +L+ C+    L  G+  H+ I +TA   D  V  +L++MYAKCG ++    V 
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            QMP  +  S N  +A   ++    +AF  F ++   DV P+H T+ T+L  C S    +
Sbjct: 412 NQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFE 471

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            G+ +H +  +   LS   V+NAL++MY +CG + DA  VF  + +R++ SW A+I  + 
Sbjct: 472 RGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYV 531

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           QHG       L    + +G   ++YTF   L + A+L +   G   H  V K G+     
Sbjct: 532 QHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIR 591

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           + T ++ MYS  G + +A    K + +    V WNA +A +  +   ++A++ F QM   
Sbjct: 592 ILTTLIKMYSKCGSLRDAYSVFKNV-QEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLE 650

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               D  TY+S+L AC+ L ++   ++ H+++ ++  E++    + ++ A  +    ++A
Sbjct: 651 GVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEA 710

Query: 476 -ERVFSQLTAADVVSWNSMIKA 496
            E +    + +D + W S++ A
Sbjct: 711 EEFIEEISSESDALMWESLLVA 732


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 189/595 (31%), Positives = 316/595 (53%), Gaps = 47/595 (7%)

Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
            V  ++ + D+     ++ GYA+N  FD A   F ++   DV     ++++M+  C   +
Sbjct: 16  TVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV----VSWNSMIKGCFDCA 71

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALL-------------------------TMYIKC- 266
            +   ++L  +  +   +S T + N  L                          +Y  C 
Sbjct: 72  DLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCC 131

Query: 267 -GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID--PNEYTFT 323
            G +ED   +F+ +  RNVISWT++I G  QHG  E+ L L   M   G++  P   T+ 
Sbjct: 132 NGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYC 191

Query: 324 VALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK- 382
             + +CA+    + G   HA V K G +   ++  A++  Y+   ++ ++ +     GK 
Sbjct: 192 CVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFH--GKL 249

Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
             + V W A + G+  N K E+A++ F +M+R     ++ +++S L +C  L +L    +
Sbjct: 250 HMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGRE 309

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
           IH+  VK   E++V VG+SLI  Y +CG+  D   +F +++  ++VSWNS+I   +Q+G 
Sbjct: 310 IHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGC 369

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
              A+  F +MV   + P   TF  +LSACSHSG+ Q G+ +F+   +      +  HY+
Sbjct: 370 GMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYA 429

Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD 622
           CMVD+LGR+GKLE A   I N+P+K  + +W  L +AC  HS L++AE  +K I++L+P 
Sbjct: 430 CMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPH 489

Query: 623 DAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
            ++ YV LSN+YA A   +D    R+ MK + I+K+PG SWI +      F S ++SH  
Sbjct: 490 CSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPS 549

Query: 683 MPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
             ++Y+KL+ L  +++++G+            D +KE  + YHSERLA+GFGLIS
Sbjct: 550 SDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLIS 604



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 147/300 (49%), Gaps = 5/300 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           V++ C+    L  G + HA + K     D +++A+L+  YA C  ++  + V     +++
Sbjct: 193 VITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMN 252

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           +     L+ GY  N   + A   F ++    V PN  ++++ L  C  L A+D G+++H 
Sbjct: 253 VVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHT 312

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +KL   +   V N+L+ MY +CG + D   +F+ + ++N++SW ++I G  QHG    
Sbjct: 313 AAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMW 372

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG---YMFHAQVIKRGMALGDFVGTA 359
            L     M    ++P+E TFT  L++C+    S  G   + + ++     + L  +    
Sbjct: 373 ALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHY--AC 430

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VD+    G++ EA++ ++ M   A+S+ W   ++    + K E A  A   ++  +  C
Sbjct: 431 MVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHC 490


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 201/625 (32%), Positives = 331/625 (52%), Gaps = 26/625 (4%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           R+ HA I    +  + F+   LV+ Y+K G +        ++   +  S N L+A YA+N
Sbjct: 52  RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQN 111

Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
                A + F  +    V+PN  T ST L  C +   +  G++L+           + V 
Sbjct: 112 GHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVE 171

Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           ++L+TMY +C  +E+AE  F+   +++V+ WTA+I+ +  +    + L LV  M  +GI 
Sbjct: 172 SSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIK 231

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG-----DFVGTAIVDMYSGLGEIW 371
               T+   L +CAS  +   G  FH    +R  A+G       V   +V++Y   G + 
Sbjct: 232 LGLPTYVSLLDACASTMDLRNGVAFH----QRAAAIGLDRSSTVVAGTLVNLYGKCGRVD 287

Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
           +A++ L  M    +SVSW A IA + +N    EAI  F  M    A   + T  S++ +C
Sbjct: 288 DARRVLDAM-PVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 346

Query: 432 SLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFS--QLTAADVV 488
           ++L +L+  ++IH+RI  S  F  ++ + +++I  Y KCG+ E A  VF    L    VV
Sbjct: 347 AVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVV 406

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFES 547
           +W +MI+AY+QNG   +AI LF++M+++G   P   TFL+VL ACSH G ++   + F S
Sbjct: 407 TWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCS 466

Query: 548 MVKEYGILPEEAHYSCMVDLLGRAGKL-EIALIFISNLPIKPTAPIWRPLFAACRCHSDL 606
           M  ++G+ P   HY C+VDLLGRAG+L E   + + +   +     W    +AC+ + DL
Sbjct: 467 MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 526

Query: 607 KMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
           + ++  +K++ EL+P++ A  V LSN+YA  G +AD    R  MK   + K  G SWIE+
Sbjct: 527 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 586

Query: 667 YNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL-YHS 715
            N+++ F   + SH    ++Y +L++L ++I++ G+           D EK+ ++L YHS
Sbjct: 587 NNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHS 646

Query: 716 ERLAVGFGLISLPAKNKFECSRTLE 740
           ERLA+  G+IS P        + L 
Sbjct: 647 ERLAMALGIISTPPGTTLRVVKNLR 671



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 176/381 (46%), Gaps = 6/381 (1%)

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y+++L  C  L   DE ++LHAQ    +    T + N L+  Y K G +  A+  F  + 
Sbjct: 38  YASLLWQCRGL---DEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
             N  SW  ++  + Q+G       L   M   G+ PN  T + AL +C + RN  +G  
Sbjct: 95  LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            +  +    + +   V ++++ MY    EI EA++   +       V W A I+ +  N 
Sbjct: 155 LNELIASEALEIDSHVESSLITMYGRCREIEEAERAF-DRSPEKDVVCWTAMISAYAHNW 213

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE-SNVHVG 459
           +T  A+E   +M          TY S+L AC+    L      H R      + S+  V 
Sbjct: 214 RTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVA 273

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
            +L+  Y KCG  +DA RV   +     VSW +MI AY+QNG A +AI LF+ M +EG  
Sbjct: 274 GTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAE 333

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
           P++ T ++V+ +C+  G +  G+++   +             + ++ + G+ G LE+A  
Sbjct: 334 PSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELARE 393

Query: 580 FISNLPIKPTAPI-WRPLFAA 599
               +P++  + + W  +  A
Sbjct: 394 VFECVPLRTRSVVTWTAMIRA 414



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 13/388 (3%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
           L  C+    L LGR+ + LI   A+  D  V +SL+ MY +C +I+       + P  D+
Sbjct: 140 LLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDV 199

Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
                +++ YA N    +A     ++D   ++    TY ++L  C S   +  G   H +
Sbjct: 200 VCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQR 259

Query: 244 TMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              +    S T V+  L+ +Y KCG ++DA  V + +  R  +SWTA+I  + Q+G+  +
Sbjct: 260 AAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAE 319

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIV 361
            + L   M  +G +P++ T    + SCA L    +G   HA++      +    +  A++
Sbjct: 320 AINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVI 379

Query: 362 DMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAAC 419
            MY   G +  A++  + +  ++ S V+W A I  + +N   EEAIE F +M +      
Sbjct: 380 TMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEP 439

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS----LIEAYNKCGSWEDA 475
           +  T+ S+L ACS L  L   EQ          +  V         L++   + G   +A
Sbjct: 440 NRVTFLSVLCACSHLGQL---EQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEA 496

Query: 476 ERVFSQLT--AADVVSWNSMIKAYSQNG 501
           E++  +     ADVV W + + A   NG
Sbjct: 497 EKLLLRHKDFEADVVCWIAFLSACQMNG 524



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKT-AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           +I V+  C+    L LG+R HA I  + +      +  +++ MY KCG+++    V + +
Sbjct: 339 LISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECV 398

Query: 179 PY--LDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAI 234
           P     + +   ++  YA+N + ++A   F  + +DG   +PN  T+ ++L  C  L  +
Sbjct: 399 PLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDG-GTEPNRVTFLSVLCACSHLGQL 457

Query: 235 DEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVF--EGLVQRNVISWTAI 290
           ++  + H  +M   +    A  +   L+ +  + G + +AE +       + +V+ W A 
Sbjct: 458 EQAWE-HFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAF 516

Query: 291 INGFKQHGDYEKPLR 305
           ++  + +GD E+  R
Sbjct: 517 LSACQMNGDLERSQR 531


>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 551

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/520 (35%), Positives = 282/520 (54%), Gaps = 22/520 (4%)

Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM----MEDAESVFEGLV 280
           L  C SL A+    QLHA  +K    +  A+   LLT+  K G     +  A  VF+ + 
Sbjct: 26  LPHCTSLRAL---AQLHAAAVKSGLGAHPALVTRLLTLCTKQGAAPAHLAYARQVFDRIP 82

Query: 281 QRNVISW-TAIINGFKQHGD-YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG 338
               + W   ++ G+ +  D   +  R++  M E+G+ P+ YTF   L +CA+ R    G
Sbjct: 83  TPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEG 142

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H   +K G A  ++V   +++MY+  G+   A+     +      VS+NA I    R
Sbjct: 143 RQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVR 202

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           + +  EA+  F +M          T +S+L AC+LL +L     IH  + K+  +S V V
Sbjct: 203 SSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKV 262

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            ++LI+ Y KCGS EDA  VF  + + D  +W+ MI AY+ +   R+AI LFE+M  +GI
Sbjct: 263 NTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGI 322

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           RP   TFL VL ACSHSG+V +G + F+SM +EYGI+P   HY C+ DLL R+G+LE A 
Sbjct: 323 RPDAVTFLGVLYACSHSGMVSEGLQYFDSM-REYGIVPGIKHYGCVTDLLARSGQLEKAY 381

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
            FI  LPI+PTA +WR L +AC  H  + + + + ++ILELD    + YV  SN+ A  G
Sbjct: 382 KFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILELDDTHGSDYVIFSNLCANTG 441

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              +    RKLM  K + K PGCS IE+ N+++ FF+ +  H +       + Q+++Q++
Sbjct: 442 KWEEMNRVRKLMNEKGVVKVPGCSSIEIDNRVHEFFAGDGRHPQSQDARRMVDQVIEQLK 501

Query: 699 DIGHTDN------------EKEDRVLYHSERLAVGFGLIS 726
            +G+  N            EK   + YHSE+LA+ FGL++
Sbjct: 502 LVGYVPNTSQVFHVEMGEEEKATSLRYHSEKLAISFGLLN 541



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 153/322 (47%), Gaps = 3/322 (0%)

Query: 98  DGCSNTVPVTCYSLESLL--DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVT 155
           DG +    V    LE  +  D    + +L  C+     E GR+ H +  KT     ++V 
Sbjct: 102 DGAAEAARVLARMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVL 161

Query: 156 ASLVNMYAKCGDIKSMVAVVKQMPYLD-IASCNCLLAGYAKNALFDQAFSFFLKLDGIDV 214
            +L+NMYA+CGD +S  A+  ++P  D + S N ++    +++   +A   F ++    +
Sbjct: 162 PTLINMYAECGDARSARAMFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGL 221

Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
           +P   T +++L+ C  L A++ G+ +H    K    S   V+ AL+ MY KCG +EDA  
Sbjct: 222 KPTSVTVTSVLSACALLGALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAID 281

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           VF+G+  R+  +W+ +I  +  H    + + L   M++ GI P+  TF   L +C+    
Sbjct: 282 VFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGM 341

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
              G  +   + + G+  G      + D+ +  G++ +A K + E+    +++ W   ++
Sbjct: 342 VSEGLQYFDSMREYGIVPGIKHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLS 401

Query: 395 GFFRNQKTEEAIEAFSQMVRND 416
               +   +     F +++  D
Sbjct: 402 ACGSHGAVDLGKRVFERILELD 423


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/631 (29%), Positives = 322/631 (51%), Gaps = 23/631 (3%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ +  +L   +R   L  G + H  ITK     D  +  +L++MY KCG++     V  
Sbjct: 4   QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAID 235
            M   ++ S   L+ G+ ++           ++    +  PN YT S  L  C  +    
Sbjct: 64  GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGF 294
            G  +H   ++  Y     V+++L+ +Y K G + DA  VF+G  +   + +W A+++G+
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183

Query: 295 KQHGDYEKPLRLVCLMR--EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
              G     L +   MR  E    P+E+TF   L +C+ L  +  G   HA +   G + 
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243

Query: 353 GD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
                +  A+VDMY     +     Q+ E  +  + + W A + G  +  +  EA+E F 
Sbjct: 244 ASNAILAGALVDMYVKCRRL-PVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFR 302

Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
           +  R+ A  D    SS++   +    +    Q+H   +K    ++V  G+S+++ Y KCG
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCG 362

Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
             ++AER+F ++ A +VVSW +M+    ++G  R+A+ LFE+M   G+ P   T+LA+LS
Sbjct: 363 LPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLS 422

Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
           ACSH+GLV + ++ F  + ++  + P+  HY+CMVDLLGRAG+L  A   I  +P++PT 
Sbjct: 423 ACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTV 482

Query: 591 PIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
            +W+ L +ACR H D+ +       +L +D D+   YVTLSN+ AEAG   +  + R  M
Sbjct: 483 GVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAM 542

Query: 651 KMKEISKEPGCSWIEVYNKIYRFF---SQNKSHSEMPKVYEKLKQLMQQI-EDIGHT--- 703
           + + + K+ GCSW+EV  +++ F+    + ++H +   +   L+ +  ++ E +G+    
Sbjct: 543 RRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADD 602

Query: 704 ------DNEKEDR---VLYHSERLAVGFGLI 725
                 D ++E R   +  HSERLAVG  L+
Sbjct: 603 ARFALHDVDEESRAESLRAHSERLAVGLWLL 633


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 173/557 (31%), Positives = 309/557 (55%), Gaps = 6/557 (1%)

Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLK-L 209
           D FV +S + MYA+ G +     +       +    N ++ GY +N    +A   F++ +
Sbjct: 254 DFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVM 313

Query: 210 DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMM 269
           +      +  T+ + L     L  +D G+QLHA  +K   + +  + NA++ MY +CG +
Sbjct: 314 ESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSI 373

Query: 270 EDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC 329
             +  VF  +++R+V++W  +++ F Q+G  ++ L LV  M++ G   +  T T  L+  
Sbjct: 374 GTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLA 433

Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL-KEMGKSASSVS 388
           ++LR+  +G   HA +I+ G+      G  ++DMY+  G I  A++   K         +
Sbjct: 434 SNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLFEKNSXYDRDEAT 492

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           WNA IAG+ +N  +EE    F +M+  +   +  T +SIL AC+ + ++   +QIH   +
Sbjct: 493 WNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAI 552

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           +     NV VG++L++ Y+K G+   AE VF++    + V++ +MI +Y Q+G   +A+ 
Sbjct: 553 RCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALS 612

Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
           LF  M+  GI+P + TF+A+LSACS++GLV +G ++F+SM +EY I P   HY C+ D+L
Sbjct: 613 LFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADML 672

Query: 569 GRAGKLEIALIFISNLPIKP-TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD--AA 625
           GR G++  A  F+  L  +  T  IW  L  ACR H + ++ + ++ ++LE++       
Sbjct: 673 GRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTG 732

Query: 626 VYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPK 685
            +V LSN+YA  G   + +  RK M+ K + KE GCSW+EV   +  F S++  H +  +
Sbjct: 733 YHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAE 792

Query: 686 VYEKLKQLMQQIEDIGH 702
           +Y+ L++L  +++D G+
Sbjct: 793 IYQMLEKLAMEMKDAGY 809



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 205/441 (46%), Gaps = 24/441 (5%)

Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKC-------------GDIKS 170
           L  C++   L+LG+  H  + ++     + V  SL+NMY+ C              +   
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
           +  V   M   ++ + N +++ Y K     +AF  F  +  + ++P   ++  +      
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230

Query: 231 LSAIDEGKQLHAQTMKL--QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
           ++  D    L+   +KL   Y+    V ++ + MY + G ++ A  +F+  ++RN   W 
Sbjct: 231 MNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290

Query: 289 AIINGFKQHGDYEKPLRL-VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
            +I G+ Q+    + + L V +M  +    ++ TF  AL + + L+   +G   HA ++K
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILK 350

Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
               L   +  AI+ MYS  G I  + K    M +    V+WN  ++ F +N   +E + 
Sbjct: 351 SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLER-DVVTWNTMVSAFVQNGLDDEGLM 409

Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS--KFESNVHVGSSLIEA 465
              +M +     D  T +++L   S L S    +Q H+ +++   +FE    +   LI+ 
Sbjct: 410 LVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG---MDGYLIDM 466

Query: 466 YNKCGSWEDAERVFSQLTA--ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
           Y K G    A+++F + +    D  +WN+MI  Y+QNG + +   +F KM+ + +RP   
Sbjct: 467 YAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526

Query: 524 TFLAVLSACSHSGLVQDGQKV 544
           T  ++L AC+  G +  G+++
Sbjct: 527 TLASILPACNPMGTIGLGKQI 547



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 203/431 (47%), Gaps = 21/431 (4%)

Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
           N ++ G+  N +   A  F+ ++      + + YT+S+ L  C    ++  GK LH   +
Sbjct: 72  NTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVL 131

Query: 246 KLQYLSKTAVSNALLTMYIKC-------GMMED------AESVFEGLVQRNVISWTAIIN 292
           +  + S   V N+LL MY  C       G   D         VF+ + +RNV++W  +I+
Sbjct: 132 RSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMIS 191

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
            + +     +  ++   M   GI P   +F     +   + +     + +  V+K G   
Sbjct: 192 WYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDY 251

Query: 353 GD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
            D  FV ++ + MY+ LG + +  +++ +     ++  WN  I G+ +N    EAI+ F 
Sbjct: 252 VDDFFVVSSAIFMYAELGCV-DFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310

Query: 411 QMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
           Q++ ++    D+ T+ S L A S L  L    Q+H+ I+KS     V + +++I  Y++C
Sbjct: 311 QVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRC 370

Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
           GS   + +VFS +   DVV+WN+M+ A+ QNG   + ++L  +M  +G    + T  A+L
Sbjct: 371 GSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALL 430

Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIFISNLPIKP 588
           S  S+    + G++    +++ +GI   E     ++D+  ++G +  A  +F  N     
Sbjct: 431 SLASNLRSQEIGKQAHAYLIR-HGI-QFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDR 488

Query: 589 TAPIWRPLFAA 599
               W  + A 
Sbjct: 489 DEATWNAMIAG 499



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 164/356 (46%), Gaps = 12/356 (3%)

Query: 87  RNDSFPDGFIDDGCSNTVPVTCYSL--------ESLLDKQFVIEVLSYCSREECLELGRR 138
           RN    +  I     N  P+    L        +  LD    +  L+  S+ + L+LGR+
Sbjct: 284 RNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQ 343

Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
            HA I K++      +  +++ MY++CG I +   V   M   D+ + N +++ + +N L
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            D+      ++       +  T + +L++  +L + + GKQ HA  ++   +    +   
Sbjct: 404 DDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIR-HGIQFEGMDGY 462

Query: 259 LLTMYIKCGMMEDAESVFE--GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
           L+ MY K G++  A+ +FE      R+  +W A+I G+ Q+G  E+   +   M E  + 
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVR 522

Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQ 376
           PN  T    L +C  +    +G   H   I+  +    FVGTA++DMYS  G I  A+  
Sbjct: 523 PNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENV 582

Query: 377 LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
             E  +  +SV++   I  + ++   E A+  F  M+ +    D  T+ +IL ACS
Sbjct: 583 FAETLEK-NSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 14/161 (8%)

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA-CDEFTYSSILKACSLLPSLATCEQI 443
           ++V WN  I GF  N    +A+  +++M  + +   D +T+SS LKAC+   SL   + +
Sbjct: 67  TTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKAL 126

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKC-------GSWED------AERVFSQLTAADVVSW 490
           H  +++S F S+  V +SL+  Y+ C       G+  D        RVF  +   +VV+W
Sbjct: 127 HCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAW 186

Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
           N+MI  Y +  R  +A  +F  M+  GIRPT  +F+ V  A
Sbjct: 187 NTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPA 227



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 89/183 (48%), Gaps = 5/183 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+    + LG++ H    +  +  + FV  +L++MY+K G I     V  +    +
Sbjct: 531 ILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKN 590

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             +   ++  Y ++ + ++A S F  + G  ++P+  T+  +L+ C     +DEG ++  
Sbjct: 591 SVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIF- 649

Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVIS-WTAIINGFKQHG 298
           Q+M+ +Y  + +  +   +  M  + G + +A    +GL +  N    W +++   + HG
Sbjct: 650 QSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHG 709

Query: 299 DYE 301
           ++E
Sbjct: 710 EFE 712


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/588 (31%), Positives = 289/588 (49%), Gaps = 44/588 (7%)

Query: 94  GFIDDG-------CSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKT 146
           G IDD        C + VPV   S+ S+L          Y S      LG+  HAL+ + 
Sbjct: 221 GSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDY-SVARAFRLGQAIHALVVRK 279

Query: 147 AVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF 206
               DQ V  SL++MY KC ++   V V + +P + I S N L+ G+ +     +A    
Sbjct: 280 GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVL 339

Query: 207 LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKC 266
             +     +PN  TYS +LA C                                   IK 
Sbjct: 340 SLMQEAGFEPNEVTYSNLLASC-----------------------------------IKA 364

Query: 267 GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVAL 326
             +  A ++F+ + + +V +W  +++G+ Q   ++  + L   M+   + P+  T  V L
Sbjct: 365 RDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 424

Query: 327 ASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASS 386
           +SC+ L     G   H+  ++  +    FV + +VDMYS  G+I  A+    +M +    
Sbjct: 425 SSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER-DV 483

Query: 387 VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
           V WN+ I+G   +   +EA + F QM  N     E +Y+S++ +CS L S+    QIH++
Sbjct: 484 VCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQ 543

Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
           ++K  ++ NV+VGS+LI+ Y KCG+ +DA   F  +   ++V+WN MI  Y+QNG   KA
Sbjct: 544 VMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKA 603

Query: 507 IILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVD 566
           + LFE M+    +P   TF+AVL+ CSHSGLV      F SM   YGI+P   HY+C++D
Sbjct: 604 VELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLID 663

Query: 567 LLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
            LGRAG+       I  +P K    IW  L AAC  H + ++ +  ++ +  +DP + + 
Sbjct: 664 ALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSP 723

Query: 627 YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
           YV LSN+YA  G   DA   R LM  + + K  G SWI+  + +  F 
Sbjct: 724 YVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFM 771



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 232/487 (47%), Gaps = 50/487 (10%)

Query: 112 ESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
           E LL   F +  VLS C     L  GRR H +  K  +  +QFV  +L+ MY KCG +  
Sbjct: 135 EGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGD 194

Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAIC 228
            V +   M   +  S   ++ G A+    D A   F ++   G+ V P   + S++L  C
Sbjct: 195 AVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDP--VSVSSVLGAC 252

Query: 229 GSLSAIDE--------GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
               A D         G+ +HA  ++  + S   V N+L+ MY KC  M++A  VFE L 
Sbjct: 253 AQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLP 312

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
              ++SW  +I GF Q G   K + ++ LM+E G +PNE T++  LASC   R+ H    
Sbjct: 313 SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVH---- 368

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
                                           A+    ++ +  S  +WN  ++G+ + +
Sbjct: 369 -------------------------------SARAMFDKISRP-SVTTWNTLLSGYCQEE 396

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
           + ++ IE F +M   +   D  T + IL +CS L  L    Q+HS  V+    +++ V S
Sbjct: 397 QHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVAS 456

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
            L++ Y+KCG    A  +F+++T  DVV WNS+I   + +   ++A   F++M   GI P
Sbjct: 457 GLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMP 516

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
           T S++ +++++CS    +  G+++   ++K+ G        S ++D+  + G ++ A +F
Sbjct: 517 TESSYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDARLF 575

Query: 581 ISNLPIK 587
              + +K
Sbjct: 576 FDTMMMK 582



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 262/582 (45%), Gaps = 92/582 (15%)

Query: 164 KCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN-ALFDQAFSFFLKLDGIDVQPNHYTYS 222
           + GD+ +   ++  MP  +  S N +++  A++     +A   + ++    + P H+T +
Sbjct: 86  RAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLA 145

Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
           ++L+ CG L+A+ +G++ H   +K+   +   V NALL MY KCG + DA  +F G+ + 
Sbjct: 146 SVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARP 205

Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS--------LRN 334
           N +S+TA++ G  Q G  +  LRL   M   G+  +  + +  L +CA          R 
Sbjct: 206 NEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARA 265

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
             +G   HA V+++G      VG +++DMY+   E+ EA K  + +  S + VSWN  I 
Sbjct: 266 FRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESL-PSVTIVSWNILIT 324

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           GF +     +A+E  S M       +E TYS++L +C           I +R V S    
Sbjct: 325 GFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC-----------IKARDVHS---- 369

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
                               A  +F +++   V +WN+++  Y Q  + +  I LF +M 
Sbjct: 370 --------------------ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 409

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            + ++P  +T   +LS+CS  G++  G++V  + V+ + +  +    S +VD+  + G++
Sbjct: 410 HQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR-FLLHNDMFVASGLVDMYSKCGQI 468

Query: 575 EIAL-IF--------------ISNLPIK-------------------PTAPIWRPLFAAC 600
            IA  IF              IS L I                    PT   +  +  +C
Sbjct: 469 GIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSC 528

Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYV--TLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
              S +     I  Q+++ D  D  VYV   L +MYA+ G   DA      M MK I   
Sbjct: 529 SRLSSIPHGRQIHAQVMK-DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNI--- 584

Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
              +W    N++   ++QN    +  +++E +    Q+ + +
Sbjct: 585 --VAW----NEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAV 620



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 180/435 (41%), Gaps = 73/435 (16%)

Query: 355 FVGTAIVDMYS--GL-----------------------------GEIWEAKKQLKEMGKS 383
           F+   +V++YS  GL                             G++  A+  L  M + 
Sbjct: 44  FLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRR 103

Query: 384 ASSVSWNAQIAGFFRNQ-KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
            ++VSWN  I+   R+     EA+E + +M         FT +S+L AC  L +L    +
Sbjct: 104 -NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRR 162

Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
            H   VK   ++N  V ++L+  Y KCGS  DA R+F  +   + VS+ +M+   +Q G 
Sbjct: 163 CHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGS 222

Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV--------QDGQKVFESMVKEYGI 554
              A+ LF +M   G+     +  +VL AC+ +           + GQ +   +V++ G 
Sbjct: 223 IDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRK-GF 281

Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA-CRCHSDLKMAEFIS 613
             ++   + ++D+  +  +++ A+    +LP   T   W  L     +  S  K  E +S
Sbjct: 282 GSDQHVGNSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLS 340

Query: 614 -KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
             Q    +P++    VT SN+ A      D    R +    +IS+    +W    N +  
Sbjct: 341 LMQEAGFEPNE----VTYSNLLASCIKARDVHSARAM--FDKISRPSVTTW----NTLLS 390

Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQ-----------------IEDIGHTDNEKEDRVLYHS 715
            + Q + H +  +++ +++    Q                 I D G   +    R L H+
Sbjct: 391 GYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHN 450

Query: 716 ERLAVGFGLISLPAK 730
           + + V  GL+ + +K
Sbjct: 451 D-MFVASGLVDMYSK 464


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 296/533 (55%), Gaps = 17/533 (3%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           +T+L++  S S + +G QLHA  +KL   +   +S+ L+  Y K  +   +  +F     
Sbjct: 25  NTLLSLTFSRS-LPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPH 83

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           ++  +W+++I+ F Q+      L    LM   G+ P+++ F  A  SC  L +  +  M 
Sbjct: 84  KSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKML 143

Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
           H   +K    L  FVG++++DMY+  G+I  A     EM    + VSW+  I G+ +  +
Sbjct: 144 HCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEM-PYRNVVSWSGLIYGYVQLGE 202

Query: 402 TEEAIEAFSQMV--RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
            +E++  F + +    +   ++FT SS+L+ C     L     IH    K+ F+S+  V 
Sbjct: 203 DDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVA 262

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGI 518
           SSLI  Y+KCG  E+A  VF ++T  ++  WN+M+ A +Q+    K   LF+KM  V G+
Sbjct: 263 SSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGM 322

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +    TFL VL ACSH+GLV+ G+  FE M K+YGI P   HYS MVDLLGRAGKL  A+
Sbjct: 323 KANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAV 381

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I  +P++PT  +W  L   CR H + K+A +++ ++ EL    + ++V LSN YA AG
Sbjct: 382 KLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAG 441

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              +A + RK+M+ + I KE G SW+E  N+I+ F + ++SH++  ++Y+KL +L ++++
Sbjct: 442 RWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMD 501

Query: 699 DIGH----------TDNEKEDR-VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             G+           D E++ R + YHSERLA+ FG I+ P        + L 
Sbjct: 502 KAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLR 554



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 11/276 (3%)

Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
           C     L + +  H    KTA   D FV +S+++MYAKCGDI     V  +MPY ++ S 
Sbjct: 131 CGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSW 190

Query: 187 NCLLAGYAKNALFDQAFSFFLKL------DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
           + L+ GY +    D++   F +       +G+    N +T S++L +CG  + +  G+ +
Sbjct: 191 SGLIYGYVQLGEDDESLRLFKRFLVEEENEGV----NDFTLSSVLRVCGGSTLLQMGRLI 246

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H  + K  + S   V+++L+++Y KCG++E+A  VFE +  RN+  W A++    QH   
Sbjct: 247 HGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHT 306

Query: 301 EKPLRLVCLMRE-DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
           +K   L   M+   G+  N  TF   L +C+       G  +   +   G+  G    + 
Sbjct: 307 DKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYST 366

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +VD+    G++ +A K ++EM    +   W A + G
Sbjct: 367 MVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 179/407 (43%), Gaps = 38/407 (9%)

Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
           L  G + HA I K  +     ++  L+N Y+K     S + +    P+    + + +++ 
Sbjct: 36  LPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISS 95

Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
           +A+N L   + ++F  +    V P+ + + +    CG LS++   K LH   +K  Y   
Sbjct: 96  FAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLD 155

Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV--CLM 310
             V ++++ MY KCG +  A +VF+ +  RNV+SW+ +I G+ Q G+ ++ LRL    L+
Sbjct: 156 IFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLV 215

Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
            E+    N++T +  L  C       MG + H    K       FV ++++ +YS  G +
Sbjct: 216 EEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVV 275

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF-TYSSILK 429
            EA    +E+      + WNA +    ++  T++  E F +M         F T+  +L 
Sbjct: 276 EEAYDVFEEVTVRNLGM-WNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLY 334

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           ACS           H+ +V+         G    E     G     +             
Sbjct: 335 ACS-----------HAGLVEK--------GKYYFELMKDYGIEPGTQH------------ 363

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
           +++M+    + G+   A+ L E+M +E   PT S + A+L+ C   G
Sbjct: 364 YSTMVDLLGRAGKLNDAVKLIEEMPME---PTESVWGALLTGCRLHG 407



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 2/179 (1%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L++GR  H L  KT+     FV +SL+++Y+KCG ++    V +++   +
Sbjct: 230 VLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRN 289

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGI-DVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
           +   N +L   A++A  D+ F  F K+  +  ++ N  T+  +L  C     +++GK   
Sbjct: 290 LGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYF 349

Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGD 299
                      T   + ++ +  + G + DA  + E +      S W A++ G + HG+
Sbjct: 350 ELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGN 408


>gi|413933941|gb|AFW68492.1| hypothetical protein ZEAMMB73_143921 [Zea mays]
          Length = 564

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 169/538 (31%), Positives = 301/538 (55%), Gaps = 2/538 (0%)

Query: 127 CSREECLELGRRYHA-LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIAS 185
           C R   +  GR  HA L+   A     F+   L+ MY+ C D  S V V   +P  ++ S
Sbjct: 27  CGRTGDIRRGRALHARLLLTGAAAASTFLANHLITMYSHCADAVSAVRVFGVVPRPNLVS 86

Query: 186 CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTM 245
              L++G  +N++   A + F  +    + P  +  S+      +LSA   G QLH   +
Sbjct: 87  WTTLVSGLVQNSMHHDALAAFAAMRRAHIAPTQFALSSAARAAAALSAPRPGTQLHCIGI 146

Query: 246 KLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLR 305
           +L + ++  V++ L  MY KCG++ +A  VF+ + Q++ ++WT +I+G+ ++G  E  + 
Sbjct: 147 RLGFDNELFVASNLADMYSKCGLLHEACRVFDQMPQKDAVTWTTMIDGYAKNGSLEAAIL 206

Query: 306 LVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
           +   M+ +G +  +++ F  AL++   L++   G   H  +IK G  L   V  A++DMY
Sbjct: 207 IFRDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMY 266

Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
           +  G++  A + +       + VS  + I G+    + EEA+E ++++ R     +EFT+
Sbjct: 267 AKSGDLENASRVVSIDPGGWNVVSATSLIDGYVEAGRIEEALETYTELGRQGVEPNEFTF 326

Query: 425 SSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA 484
           +S++K C++   L    Q+H++++K+   S+  VGS+L+  Y  CG    + ++F+++  
Sbjct: 327 ASMIKGCAMHDLLEQGAQLHAQVLKTNLISDSFVGSTLVYMYGNCGLISLSLQLFNEIGY 386

Query: 485 ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
              ++WN++I  Y+Q+G    AI  F++M   GIRP + TF+ +L+ACSH+GLV +G   
Sbjct: 387 RTEIAWNAVINVYAQHGHGWGAIQAFDRMTSSGIRPNHITFVCLLTACSHAGLVDEGLGY 446

Query: 545 FESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           F SM   +GI P+  HYSC++D+ GRAG+L+ A  FIS +P+KP+A  W  L  ACR   
Sbjct: 447 FHSMKDAHGIEPKAEHYSCIIDMYGRAGRLDEAEKFISEMPVKPSAYAWCSLLGACRMQG 506

Query: 605 DLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           + ++ E  ++ +++LDP++  ++++LS +Y   G   D +  +K MK   I K PG S
Sbjct: 507 NKELGEVAAQNLMKLDPNNTGIHISLSGIYTSLGQWEDVKAVKKSMKDISIKKLPGFS 564


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 179/548 (32%), Positives = 291/548 (53%), Gaps = 18/548 (3%)

Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
           L+   V P+    +  L  CGS +AI EGK++H   +   + S   + N L+ MY KCG 
Sbjct: 48  LEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGS 107

Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
           ++ A+SVF    +RNV SWT ++  F  +G Y   L L+ +M  +GI PN  TF   L +
Sbjct: 108 LQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGA 167

Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
            A+L     G   H ++   G     FV   +++MY+    + +A    + +  S S ++
Sbjct: 168 VAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESL-TSRSVIA 226

Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
           W A +A +  N    +A++ F  M  +     E T+ +++  C+ +       ++H  ++
Sbjct: 227 WTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VI 285

Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
            ++ E+NV VG++LI  Y KC S ++A +VF  +   D+++WNSMI  Y QNG   +A+ 
Sbjct: 286 DARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALE 345

Query: 509 LFEKM-----VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSC 563
           ++++M      + GI   + TF+ VL ACSH+GLV+D  K++ SM+ +YG  P      C
Sbjct: 346 IYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGC 405

Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDD 623
           ++DLLGRAG L+ A  FI+++P  P   IW  L  AC  H+D++ A   + +I+ L P D
Sbjct: 406 LIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTD 465

Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEM 683
           +  YV LSN+YA A    D    RKLM  + + K  G S IE+   ++ F + + SH   
Sbjct: 466 SGSYVALSNLYALAERWDDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRK 525

Query: 684 PKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLPAKNK 732
            ++YE+L+++   I + G+  +            KE    +HSERLA+ FG+IS P   +
Sbjct: 526 REIYEELRRIEGVIRERGYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTE 585

Query: 733 FECSRTLE 740
               + L 
Sbjct: 586 LRIMKNLR 593



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 197/420 (46%), Gaps = 15/420 (3%)

Query: 122 EVLSY----CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ 177
           EVL++    C  E  +  G+R H  I        +++   LV MY KCG +++  +V   
Sbjct: 58  EVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHI 117

Query: 178 MPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG 237
            P  ++ S   ++A +A N  +  A +    +D   + PN  T+  +L    +LS +D G
Sbjct: 118 TPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRG 177

Query: 238 KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
           + LH +     +L+   V+N L+ MY KC  + DA SVFE L  R+VI+WTA++  +  +
Sbjct: 178 RALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALN 237

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G +   L++  LM  DG++P E TF   +  CA +    +G   H  +  R  A    VG
Sbjct: 238 GFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGVIDARSEA-NVCVG 296

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            A+++MY       EA+K    M +    ++WN+ IA + +N    +A+E + +M  +  
Sbjct: 297 NALINMYGKCASPDEARKVFDAMQRK-DIITWNSMIAVYGQNGYGFQALEIYKRMQESRM 355

Query: 418 AC-----DEFTYSSILKACSLLPSLA-TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
                  D+ T+  +L ACS    +  +C+   S I    F+        LI+   + G 
Sbjct: 356 TILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGW 415

Query: 472 WEDAERVFSQLT-AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
            ++AE   + +    D   W  ++ A   +    +A    ++++   +RPT+S     LS
Sbjct: 416 LDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIM--ALRPTDSGSYVALS 473



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 134/304 (44%), Gaps = 17/304 (5%)

Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
           IE+L   +    L+ GR  H  I       D FV   L+NMYAKC  +    +V + +  
Sbjct: 162 IELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTS 221

Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
             + +   L+A YA N  F  A   FL +    V+P   T+ T++ +C  ++    G+++
Sbjct: 222 RSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREV 281

Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
           H   +  +  +   V NAL+ MY KC   ++A  VF+ + ++++I+W ++I  + Q+G  
Sbjct: 282 HG-VIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYG 340

Query: 301 EKPLRLVCLMRED-----GIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIKRG 349
            + L +   M+E      GI  ++ TF   L +C     SH G       ++ + +   G
Sbjct: 341 FQALEIYKRMQESRMTILGITHDDITFIGVLFAC-----SHAGLVKDSCKLYSSMIGDYG 395

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
                     ++D+    G + EA++ +  M        W   +     +   E A  A 
Sbjct: 396 FKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAA 455

Query: 410 SQMV 413
            +++
Sbjct: 456 DRIM 459



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 1/238 (0%)

Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
           V L+ +  + P+       L  C S      G   H  ++  G     ++   +V+MY  
Sbjct: 45  VQLLEDRSVSPSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGK 104

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G + +A K +  +    +  SW   +A F  N    +A+     M     + +  T+  
Sbjct: 105 CGSL-QAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIE 163

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           +L A + L  L     +H RI    F +++ V + LI  Y KC S  DA  VF  LT+  
Sbjct: 164 LLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRS 223

Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKV 544
           V++W +++ AY+ NG  R A+ +F  M ++G+ PT  TF+ V+  C+   +   G++V
Sbjct: 224 VIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREV 281


>gi|356532255|ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 948

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 193/667 (28%), Positives = 328/667 (49%), Gaps = 103/667 (15%)

Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDI------------------KSMV--------- 172
           HA + K  +     +  SLV+MY KCG I                   SM+         
Sbjct: 165 HAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGP 224

Query: 173 ----AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
                V  +MP  D  S N L++ +++     +  S ++++  +  +PN  TY ++L+ C
Sbjct: 225 YEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTYVEMCNLGFKPNFMTYGSVLSAC 284

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
            S+S +  G  LHA+ +++++     + + L+ MY KCG +  A  VF  L ++N +SWT
Sbjct: 285 ASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSWT 344

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            +I+G  Q G  +  L L   MR+  +  +E+T    L  C+    +  G + H   IK 
Sbjct: 345 CLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHGYAIKN 404

Query: 349 GMALGDFVGTAIVDMYSGLGEI-----------------WEA-------------KKQLK 378
           GM     VG AI+ MY+  G+                  W A              +Q  
Sbjct: 405 GMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCF 464

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           +M    + ++WN+ ++ + ++  +EE ++ +  M       D  T+++ ++AC+ L ++ 
Sbjct: 465 DMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIK 524

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
              Q+ S + K    S+V V +S++  Y++CG  ++A +VF  +   +++SWN+M+ A++
Sbjct: 525 LGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFA 584

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
           QNG   KAI  +E M+    +P + +++AVLS                            
Sbjct: 585 QNGLGNKAIETYEDMLRTECKPDHISYVAVLS---------------------------- 616

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
                  DLLGRAG L+ A   I  +P KP A +W  L  ACR H D  +A+  +K+++E
Sbjct: 617 -------DLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAKTAAKKLME 669

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
           L+ +D+  YV L+N+Y E+G   +  + RKLMK+K I K PGCSWIEV N+++ F     
Sbjct: 670 LNVEDSGGYVLLANIYTESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRLHVFTVDET 729

Query: 679 SHSEMPKVYEKLKQLMQQIEDIGH-----TDNEKEDRVLYHSERLAVGFGLISLPAKNKF 733
           SH ++ +VY KL+++M++IED G      +   +  +  YHSE+LA  FGL+SLP     
Sbjct: 730 SHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--YHSEKLAFAFGLLSLPPWMPI 787

Query: 734 ECSRTLE 740
           + ++ L 
Sbjct: 788 QVTKNLR 794



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 151/620 (24%), Positives = 273/620 (44%), Gaps = 104/620 (16%)

Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQ----------------- 177
           + R+ HA +  + +    F+  +L++MY+ CG +     V ++                 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFF 81

Query: 178 --------------MPYL--DIASCNCLLAGYAKNALFDQAFSFFLKL---DGIDVQP-N 217
                         MP++  D  S   +++GY +N L   +   F+ +      D+Q  +
Sbjct: 82  DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141

Query: 218 HYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFE 277
            ++Y+  +  CG L++     QLHA  +KL   ++T + N+L+ MYIKCG +  AE+VF 
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201

Query: 278 GLVQRNVISWTAIINGFKQ-HGDYEKPLRLVCLMRED----------------------- 313
            +   ++  W ++I G+ Q +G YE       + + D                       
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLST 261

Query: 314 -------GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
                  G  PN  T+   L++CAS+ +   G   HA++++   +L  F+G+ ++DMY+ 
Sbjct: 262 YVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAK 321

Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
            G +  A++    +G+  + VSW   I+G  +    ++A+  F+QM +     DEFT  +
Sbjct: 322 CGCLALARRVFNSLGEQ-NQVSWTCLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVT 380

Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
           IL  CS     AT E +H   +K+  +S+V VG+++I  Y +CG  E A   F  +   D
Sbjct: 381 ILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRD 440

Query: 487 VVSWNSMIKAYSQNG---RARK----------------------------AIILFEKMVV 515
            +SW +MI A+SQNG   RAR+                             + L+  M  
Sbjct: 441 TISWTAMITAFSQNGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRS 500

Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
           + ++P   TF   + AC+    ++ G +V  S V ++G+  + +  + +V +  R G+++
Sbjct: 501 KAVKPDWVTFATSIRACADLATIKLGTQVV-SHVTKFGLSSDVSVANSIVTMYSRCGQIK 559

Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNM 633
            A     ++ +K     W  + AA   +     A    + +L  E  PD  +    LS++
Sbjct: 560 EARKVFDSIHVKNLIS-WNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLSDL 618

Query: 634 YAEAGLQADAEEQRKLMKMK 653
              AGL   A+     M  K
Sbjct: 619 LGRAGLLDQAKNLIDGMPFK 638



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 196/433 (45%), Gaps = 37/433 (8%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VLS C+    L+ G   HA I +     D F+ + L++MYAKCG +     V   +   +
Sbjct: 280 VLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQN 339

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
             S  CL++G A+  L D A + F ++    V  + +T  T+L +C   +    G+ LH 
Sbjct: 340 QVSWTCLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLHG 399

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY-- 300
             +K    S   V NA++TMY +CG  E A   F  +  R+ ISWTA+I  F Q+GD   
Sbjct: 400 YAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDR 459

Query: 301 -----------------------------EKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
                                        E+ ++L  LMR   + P+  TF  ++ +CA 
Sbjct: 460 ARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
           L    +G    + V K G++    V  +IV MYS  G+I EA+K    +    + +SWNA
Sbjct: 520 LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSI-HVKNLISWNA 578

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
            +A F +N    +AIE +  M+R +   D  +Y ++L    LL      +Q  + I    
Sbjct: 579 MMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVLS--DLLGRAGLLDQAKNLIDGMP 636

Query: 452 FESNVHVGSSLIEA---YNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
           F+ N  V  +L+ A   ++     + A +   +L   D   +  +   Y+++G       
Sbjct: 637 FKPNATVWGALLGACRIHHDSILAKTAAKKLMELNVEDSGGYVLLANIYTESGELENVAD 696

Query: 509 LFEKMVVEGIRPT 521
           + + M V+GIR +
Sbjct: 697 MRKLMKVKGIRKS 709



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 195/440 (44%), Gaps = 45/440 (10%)

Query: 257 NALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAIINGFKQHGDYEKPLR-LVCLMRED 313
           N +L  +   G M +AE++F+ +  + R+ +SWT +I+G+ Q+G     ++  + ++R+ 
Sbjct: 74  NTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDS 133

Query: 314 GIDP---NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
             D    + +++T  + +C  L ++      HA VIK  +     +  ++VDMY   G I
Sbjct: 134 NHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAI 193

Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC----------- 419
             A+     + +S S   WN+ I G+ +     EA+  F++M ++D              
Sbjct: 194 TLAETVFLNI-ESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQY 252

Query: 420 --------------------DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
                               +  TY S+L AC+ +  L     +H+RI++ +   +  +G
Sbjct: 253 GHGIRCLSTYVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLG 312

Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
           S LI+ Y KCG    A RVF+ L   + VSW  +I   +Q G    A+ LF +M    + 
Sbjct: 313 SGLIDMYAKCGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLGDDALALFNQMRQASVV 372

Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
               T + +L  CS       G+ +    +K  G+       + ++ +  R G  E A +
Sbjct: 373 LDEFTLVTILGVCSGQNYAATGELLHGYAIKN-GMDSSVPVGNAIITMYARCGDTEKASL 431

Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAG 638
              ++P++ T   W  +  A   + D+  A    +Q  ++ P+ +   + ++ + Y + G
Sbjct: 432 AFRSMPLRDTIS-WTAMITAFSQNGDIDRA----RQCFDMTPERNVITWNSMLSTYIQHG 486

Query: 639 LQADAEEQRKLMKMKEISKE 658
              +  +   LM+ K +  +
Sbjct: 487 FSEEGMKLYVLMRSKAVKPD 506



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 38/233 (16%)

Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA 173
           +LD+  ++ +L  CS +     G   H    K  +     V  +++ MYA+CGD +    
Sbjct: 372 VLDEFTLVTILGVCSGQNYAATGELLHGYAIKNGMDSSVPVGNAIITMYARCGDTEKASL 431

Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQA------------------------------- 202
             + MP  D  S   ++  +++N   D+A                               
Sbjct: 432 AFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMTPERNVITWNSMLSTYIQHGFSEEG 491

Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
              ++ +    V+P+  T++T +  C  L+ I  G Q+ +   K    S  +V+N+++TM
Sbjct: 492 MKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTM 551

Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG-------DYEKPLRLVC 308
           Y +CG +++A  VF+ +  +N+ISW A++  F Q+G        YE  LR  C
Sbjct: 552 YSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTEC 604



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
           A  L  S     ++H++++ S  ++++ + ++L+  Y+ CG  +DA  VF +   A++ +
Sbjct: 13  AFKLCGSPPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFT 72

Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
           WN+M+ A+  +GR R+A  LF++M    I   + ++  ++S    +GL     K F SM+
Sbjct: 73  WNTMLHAFFDSGRMREAENLFDEM--PHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSML 130

Query: 550 KE 551
           ++
Sbjct: 131 RD 132


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 179/562 (31%), Positives = 306/562 (54%), Gaps = 3/562 (0%)

Query: 140 HALITKTAVC-GDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
           HALI  T +   D    A L+  Y +  +I     V ++MP   I + N ++  Y++   
Sbjct: 5   HALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNY 64

Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
            D+  + + ++    ++P+  T++  L  C SL  +D G+ +  Q +   Y     V ++
Sbjct: 65  PDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSS 124

Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
           +L +Y K G M+ A+ VF+ +V+R+V+SWT +I GF Q G     + +   M+++  + +
Sbjct: 125 VLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGD 184

Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
                  + +C SL +S  G   H  +++R M + + + T+++DMY+  G++ E   ++ 
Sbjct: 185 GVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKL-ELASRVF 243

Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
           E     S +SW A I+GF +N    + + +  +M  +    D  +  S L AC+ + +L 
Sbjct: 244 EGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLK 303

Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
             + +H  IVK  +   V  G++LI+ Y KCG+   A  +F Q+   D++ WN+MI +Y 
Sbjct: 304 VGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYG 362

Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
            +G   +A+ LF KM    I P ++TF ++LSACSHSGLV++GQ  F  ++ +  I P E
Sbjct: 363 IHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSE 422

Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE 618
            HY+CMVDLL RAG++E A   I ++ IKP   IW  L + C  H +L + E ++K+ILE
Sbjct: 423 KHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILE 482

Query: 619 LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK 678
            +PDD  +YV +SN ++ A    DA   RK+MK   + K PG S +EV   +  F  ++K
Sbjct: 483 SNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAFLMEDK 542

Query: 679 SHSEMPKVYEKLKQLMQQIEDI 700
           +H++   + + L  L  ++  I
Sbjct: 543 NHNQYQDILQILDILDNEMRSI 564



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 139/286 (48%), Gaps = 12/286 (4%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D   ++ ++  C+     + G   H  + +  +  D  +  SL++MYAK G ++    V 
Sbjct: 184 DGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVF 243

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
           + +PY  + S   L++G+A+N   ++  +  +++     +P+  +  + L+ C  +  + 
Sbjct: 244 EGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLK 303

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
            GK LH   +K  YL K +   AL+ MY KCG +  A ++F+ +  R++I W A+I+ + 
Sbjct: 304 VGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYG 362

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMG------YMFHAQVIKRG 349
            HGD  + L L   M+E  I P+  TF   L++C     SH G      Y FH  + K  
Sbjct: 363 IHGDGIEALSLFLKMKETNITPDHATFASLLSAC-----SHSGLVEEGQYWFHVLIDKSK 417

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
           +   +     +VD+ S  G++ EA + ++ M        W A ++G
Sbjct: 418 IQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 172/473 (36%), Positives = 270/473 (57%), Gaps = 43/473 (9%)

Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
           M   G+ PN++T +  + +CAS+ +   G   H  +IK G      V TA+V MY+  G 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 370 I-----------------WEA-----------KKQLK---EMGKSASSVSWNAQIAGFFR 398
           +                 W A           KK LK   EM +    VSW A IAG+ +
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSER-DVVSWTAVIAGYAQ 119

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
           N   +E++  F+QM +     D F   S+L AC+ L +L    Q H+ +V+S F  ++ V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
           GS+L++ Y K GS EDA +VF ++   + VSWNS+I   +Q+GR   A++LFE+M+  GI
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
           +P   +F+ VLSACSH+GLV +G+  F  M + YGI+P+ +HY+CM+DLLGRAG L+ A 
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
            FI+ +P++P   +W  L  ACR H + ++A+ I++ +L ++   A +YV LSN+YA AG
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
              DA + RKLMK + + K+PG SWIEV   ++ F +   SH ++ +++E L+ L ++++
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMK 419

Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
             G+            D+EKE  + +HSE+LA+ FG+I+         ++ L 
Sbjct: 420 AAGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLR 472



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 189/384 (49%), Gaps = 38/384 (9%)

Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
           G  V+PN +T ST++  C S++++++GKQ H   +K+ + S   V  AL+ MY +CG +E
Sbjct: 3   GKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLE 62

Query: 271 DAESVFEG-------------------------------LVQRNVISWTAIINGFKQHGD 299
           DA  VF+                                + +R+V+SWTA+I G+ Q+G 
Sbjct: 63  DAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGY 122

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
            ++ L +   MR+ G+  + +     L++CA L    +G  FHA V++ G AL   VG+A
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182

Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
           +VDMY+  G + +A +   +M +  + VSWN+ I G  ++ +  +A+  F QM++     
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQR-NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKP 241

Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERV 478
           +E ++  +L ACS    +       + + ++     +V   + +I+   + G  ++AE  
Sbjct: 242 NEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENF 301

Query: 479 FSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC-SHSG 536
            + +    DV  W +++ A   +G    A  + E ++  G+    +    +LS   + +G
Sbjct: 302 INGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLL--GMEVQIAGIYVLLSNIYAAAG 359

Query: 537 LVQDGQKVFESMVKEYGILPEEAH 560
              D  KV   ++K+ G++ +  +
Sbjct: 360 QWDDAAKV-RKLMKDRGVMKQPGY 382



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 35/322 (10%)

Query: 118 QFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG---------- 166
           QF +  V+  C+    LE G++ H  I K     D  V  +LV+MYA+CG          
Sbjct: 10  QFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFD 69

Query: 167 ---------------------DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
                                D+K  + +  +M   D+ S   ++AGYA+N   D++ + 
Sbjct: 70  KMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNV 129

Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
           F ++    ++ + +   ++L+ C  L+A++ G+Q HA  ++  +     V +AL+ MY K
Sbjct: 130 FNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAK 189

Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
            G MEDA  VF+ + QRN +SW +II G  QHG     + L   M + GI PNE +F   
Sbjct: 190 SGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGV 249

Query: 326 LASCA--SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKS 383
           L++C+   L N   GY F+      G+       T ++D+    G + EA+  +  M   
Sbjct: 250 LSACSHTGLVNEGRGY-FNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVE 308

Query: 384 ASSVSWNAQIAGFFRNQKTEEA 405
                W A +     +  TE A
Sbjct: 309 PDVSVWGALLGACRIHGNTELA 330



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 99/193 (51%), Gaps = 2/193 (1%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           D+  +  VLS C+    LELGR++HA + ++    D  V ++LV+MYAK G ++    V 
Sbjct: 141 DRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVF 200

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
            +MP  +  S N ++ G A++   + A   F ++    ++PN  ++  +L+ C     ++
Sbjct: 201 DKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVN 260

Query: 236 EGKQ-LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIING 293
           EG+   +  T     +   +    ++ +  + G +++AE+   G+ V+ +V  W A++  
Sbjct: 261 EGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGA 320

Query: 294 FKQHGDYEKPLRL 306
            + HG+ E   R+
Sbjct: 321 CRIHGNTELAKRI 333


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 180/615 (29%), Positives = 322/615 (52%), Gaps = 15/615 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           VL  C     L  G+  H  + +     D  V  +L+ MY KCGD+KS   +  +MP  D
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           I S N +++GY +N +  +    F  + G+ V P+  T +++++ C  L     G+ +HA
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
             +   +    +V N+L  MY+  G   +AE +F  + +++++SWT +I+G++ +   +K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
            +    +M +D + P+E T    L++CA+L +   G   H   IK  +     V   +++
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441

Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
           MYS    I +A      + +  + +SW + IAG   N +  EA+    QM +     +  
Sbjct: 442 MYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAI 499

Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
           T ++ L AC+ + +L   ++IH+ ++++    +  + ++L++ Y +CG    A   F+  
Sbjct: 500 TLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS- 558

Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
              DV SWN ++  YS+ G+    + LF++MV   +RP   TF+++L  CS S +V+ G 
Sbjct: 559 QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL 618

Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
             F  M ++YG+ P   HY+C+VDLLGRAG+L+ A  FI  +P+ P   +W  L  ACR 
Sbjct: 619 MYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRI 677

Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
           H  + + E  ++ I ELD      Y+ L N+YA+ G   +  + R++MK   ++ + GCS
Sbjct: 678 HHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCS 737

Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG-----------HTDNEKEDRV 711
           W+EV  K++ F S +K H +  ++   L+   +++ ++G            T+  +++  
Sbjct: 738 WVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIF 797

Query: 712 LYHSERLAVGFGLIS 726
             HSER A+ FGLI+
Sbjct: 798 CGHSERKAIAFGLIN 812



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 246/469 (52%), Gaps = 6/469 (1%)

Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHAL-ITKTAVCGDQFVTASLVNMYAKCGDIK 169
           L   +D+   + ++  C  +   E G + +++ ++  +  G +   A L  M+ + G++ 
Sbjct: 88  LRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLA-MFVRFGNLV 146

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAIC 228
               V  +M   ++ S N L+ GYAK   FD+A   + ++  +  V+P+ YT+  +L  C
Sbjct: 147 DAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC 206

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
           G +  +  GK++H   ++  Y     V NAL+TMY+KCG ++ A  +F+ + +R++ISW 
Sbjct: 207 GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWN 266

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
           A+I+G+ ++G   + L L   MR   +DP+  T T  +++C  L +  +G   HA VI  
Sbjct: 267 AMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT 326

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
           G A+   V  ++  MY   G   EA+K    M +    VSW   I+G+  N   ++AI+ 
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK-DIVSWTTMISGYEYNFLPDKAIDT 385

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           +  M ++    DE T +++L AC+ L  L T  ++H   +K++  S V V ++LI  Y+K
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSK 445

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           C   + A  +F  +   +V+SW S+I     N R  +A+I   +M +  ++P   T  A 
Sbjct: 446 CKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAA 504

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
           L+AC+  G +  G+++   +++  G+  ++   + ++D+  R G++  A
Sbjct: 505 LAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALLDMYVRCGRMNTA 552



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 208/439 (47%), Gaps = 13/439 (2%)

Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
           L G   N   ++A      +  + V  +   +  ++ +C    A +EG ++++  +    
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC- 308
                + NA L M+++ G + DA  VF  + +RN+ SW  ++ G+ + G +++ + L   
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
           ++   G+ P+ YTF   L +C  + +   G   H  V++ G  L   V  A++ MY   G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
           ++  A+     M +    +SWNA I+G+F N    E +E F  M       D  T +S++
Sbjct: 246 DVKSARLLFDRMPRR-DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
            AC LL        IH+ ++ + F  ++ V +SL + Y   GSW +AE++FS++   D+V
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364

Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
           SW +MI  Y  N    KAI  +  M  + ++P   T  AVLSAC+  G +  G ++ +  
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424

Query: 549 VK----EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
           +K     Y I+        ++++  +   ++ AL    N+P K     W  + A  R ++
Sbjct: 425 IKARLISYVIVANN-----LINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNN 478

Query: 605 D-LKMAEFISKQILELDPD 622
              +   F+ +  + L P+
Sbjct: 479 RCFEALIFLRQMKMTLQPN 497



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
           Q+ G   N K EEA++  + M     A DE  + ++++ C    +     +++S  + S 
Sbjct: 65  QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124

Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
               V +G++ +  + + G+  DA  VF +++  ++ SWN ++  Y++ G   +A+ L+ 
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184

Query: 512 KMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
           +M+ V G++P   TF  VL  C     +  G++V   +V+ YG   +    + ++ +  +
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVK 243

Query: 571 AGKLEIALIFISNLPIKPTAPIWRPL----FAACRCHSDLKMAEFISKQILELDPDDAAV 626
            G ++ A +    +P +     W  +    F    CH  L++  F + + L +DPD    
Sbjct: 244 CGDVKSARLLFDRMPRRDIIS-WNAMISGYFENGMCHEGLEL--FFAMRGLSVDPD---- 296

Query: 627 YVTLSNMYAEAGLQADAEEQRKL 649
            +TL+++ +   L  D    R +
Sbjct: 297 LMTLTSVISACELLGDRRLGRDI 319


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/565 (31%), Positives = 292/565 (51%), Gaps = 50/565 (8%)

Query: 123 VLSYCSREECLELG--------------RRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           VL  CSR  C E G              ++ H L  K     D  +  SL++MYAK G++
Sbjct: 244 VLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNM 303

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
            S   +   MP + + S N ++AGY + +   +A  +  ++     +P+  TY  ML  C
Sbjct: 304 DSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC 363

Query: 229 GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWT 288
                                              IK G +E    +F+G+   ++ SW 
Sbjct: 364 -----------------------------------IKSGDIEAGRQMFDGMSSPSLSSWN 388

Query: 289 AIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
            I++G+ Q+ ++++ ++L   M+   + P+  T  + L+S A +     G   HA   K 
Sbjct: 389 TILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKA 448

Query: 349 GMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
                 ++ + ++ MYS  G++  AK+    + +    V WN+ +AG   N   +EA   
Sbjct: 449 VFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNSLDKEAFTF 507

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F +M        +F+Y+++L  C+ L SL+   Q+HS+I +  + ++  VGS+LI+ Y+K
Sbjct: 508 FKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSK 567

Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
           CG  + A  VF  +   + V+WN MI  Y+QNG   +A++L+E M+  G +P   TF+AV
Sbjct: 568 CGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAV 627

Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
           L+ACSHSGLV  G K+F SM +E+G+ P   HY+C++D LGRAG+L  A + I  +P K 
Sbjct: 628 LTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKY 687

Query: 589 TAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
              IW  L ++CR ++D+ +A   ++++  LDP ++A YV L+N+Y+  G   DA+  R+
Sbjct: 688 DPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRE 747

Query: 649 LMKMKEISKEPGCSWIEVYNKIYRF 673
           LM   ++ K+PG SWIE  N +  F
Sbjct: 748 LMSYNQVVKDPGYSWIEHKNGMQAF 772



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 229/483 (47%), Gaps = 52/483 (10%)

Query: 110 SLESLLDKQFVI-EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDI 168
           S E  +   F +  VLS C     +E GRR H +  K  +  + +V  +L+ MYAKC  I
Sbjct: 129 SREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCI 188

Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC 228
              +     +P  +  S   ++ G A +   ++AF  F  +    +  +  + S++L +C
Sbjct: 189 GDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVC 248

Query: 229 GS--------------LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
                           LS+   G+Q+H  T+K  + S   ++N+LL MY K G M+ AE 
Sbjct: 249 SRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEM 308

Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
           +F  + + +V+SW  +I G+ Q     K +  +  M+  G +P+E T+   L +C     
Sbjct: 309 IFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC----- 363

Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
                      IK G            D+        EA +Q+ +   S S  SWN  ++
Sbjct: 364 -----------IKSG------------DI--------EAGRQMFDGMSSPSLSSWNTILS 392

Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
           G+ +N+  +EA++ F +M       D  T + IL + + +  L    Q+H+   K+ F +
Sbjct: 393 GYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRT 452

Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
           ++++ S LI  Y+KCG  E A+R+F ++   D+V WNSM+   S N   ++A   F+KM 
Sbjct: 453 DIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMR 512

Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
            +G+ P+  ++  VLS C+    +  G++V   + +E G + +    S ++D+  + G +
Sbjct: 513 EKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYSKCGDV 571

Query: 575 EIA 577
           + A
Sbjct: 572 DAA 574



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 217/505 (42%), Gaps = 84/505 (16%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++  +L  C  ++    G+  HA + ++ +  D F++  L+  YAKC  I +   +  QM
Sbjct: 7   YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFF-----------------LKLDGIDVQ------ 215
           P  DI + N +L  Y K +  + A   F                 L  +G + +      
Sbjct: 67  PKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYY 126

Query: 216 --------PNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG 267
                   P H+T +++L+ CG+L  ++ G++ H  ++K+   +   V NALL MY KC 
Sbjct: 127 RMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCR 186

Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
            + DA   F  + + N +S+TA++ G        +  RL  LM  + I  +  + +  L 
Sbjct: 187 CIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLG 246

Query: 328 SCAS--------------LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            C+               L +   G   H   IK G      +  +++DMY+  G +  A
Sbjct: 247 VCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSA 306

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
           +     M    S VSWN  IAG+ +  ++ +AIE   +M  +    DE TY ++L AC  
Sbjct: 307 EMIFVNM-PEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI- 364

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
                                             K G  E   ++F  +++  + SWN++
Sbjct: 365 ----------------------------------KSGDIEAGRQMFDGMSSPSLSSWNTI 390

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +  YSQN   ++A+ LF +M    + P  +T   +LS+ +   L++ G++V    V +  
Sbjct: 391 LSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHA--VSQKA 448

Query: 554 ILPEEAHY-SCMVDLLGRAGKLEIA 577
           +   + +  S ++ +  + GK+E+A
Sbjct: 449 VFRTDIYLASGLIGMYSKCGKVEMA 473



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 155/352 (44%), Gaps = 27/352 (7%)

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           +   AI+  Y    E+ +A     EM +  + VSWN  I+   RN   ++A+  + +M R
Sbjct: 72  YTWNAILGAYCKASELEDAHVLFAEMPER-NIVSWNTLISALTRNGFEQKALGVYYRMSR 130

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                  FT +S+L AC  L  +    + H   +K   ++N++VG++L+  Y KC    D
Sbjct: 131 EGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGD 190

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A + F  +   + VS+ +M+   + + +  +A  LF  M+   I   + +  +VL  CS 
Sbjct: 191 AIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSR 250

Query: 535 SGL----VQDGQKVFESMVK---------EYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
            G     + D   V  S V          ++G   +    + ++D+  + G ++ A +  
Sbjct: 251 GGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF 310

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDL-KMAEFISK-QILELDPDDAAVYVTLSNMYAEAGL 639
            N+P + +   W  + A     S   K  E++ + Q    +PD+    +T  NM      
Sbjct: 311 VNMP-EVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDE----ITYVNMLVACIK 365

Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
             D E  R++     +S     SW    N I   +SQN++H E  K++ +++
Sbjct: 366 SGDIEAGRQMFD--GMSSPSLSSW----NTILSGYSQNENHKEAVKLFREMQ 411


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 173/540 (32%), Positives = 304/540 (56%), Gaps = 22/540 (4%)

Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQ--YLSKTAVSNALLTMYIKCGMMEDAESVF- 276
           + S  L  C S  +++ G++LH   ++ Q   L    +   L+T+Y  CG + +A  VF 
Sbjct: 72  SISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ 131

Query: 277 ---EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
              E   +  V  W A+  G+ ++G   + L L   M    + P  + F++AL +C+ L 
Sbjct: 132 IDDEKPPEEPV--WVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLD 189

Query: 334 NSHMGYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
           N+ +G   HAQ++K  +   D  V  A++ +Y  +G   E  K  +EM +  + VSWN  
Sbjct: 190 NALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQR-NVVSWNTL 248

Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
           IAGF    +  E + AF  M R        T +++L  C+ + +L + ++IH +I+KS+ 
Sbjct: 249 IAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRK 308

Query: 453 ESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
            ++V + +SL++ Y KCG     E+VF ++ + D+ SWN+M+  +S NG+  +A+ LF++
Sbjct: 309 NADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDE 368

Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           M+  GI P   TF+A+LS CSHSGL  +G+++F ++++++G+ P   HY+C+VD+LGR+G
Sbjct: 369 MIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSG 428

Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
           K + AL    N+P++P+  IW  L  +CR + ++ +AE +++++ E++P++   YV LSN
Sbjct: 429 KFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSN 488

Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL-K 691
           +YA AG+  D +  R++M +  + K+ GCSWI++ +KI+ F +   S       Y+K+  
Sbjct: 489 IYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWN 548

Query: 692 QLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +L   ++++G+  N            K   V  HSERLA  F LI+  A      ++ L 
Sbjct: 549 ELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLR 608



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 203/434 (46%), Gaps = 13/434 (2%)

Query: 124 LSYCSREECLELGRRYHA--LITKTAVCGDQFVTASLVNMYAKCGDI---KSMVAVVKQM 178
           L  C     LE GR+ H   L ++  V  +  +   L+ +Y+ CG +   + +  +  + 
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
           P  +      +  GY++N    +A   +  +    V+P ++ +S  L  C  L     G+
Sbjct: 137 PPEEPVWV-AMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGR 195

Query: 239 QLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
            +HAQ +K     +   V+NALL +Y++ G  ++   VFE + QRNV+SW  +I GF   
Sbjct: 196 AIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQ 255

Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
           G   + L    +M+ +G+  +  T T  L  CA +   H G   H Q++K        + 
Sbjct: 256 GRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLL 315

Query: 358 TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA 417
            +++DMY+  GEI   +K    M  S    SWN  +AGF  N +  EA+  F +M+R   
Sbjct: 316 NSLMDMYAKCGEIGYCEKVFDRM-HSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGI 374

Query: 418 ACDEFTYSSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAE 476
             +  T+ ++L  CS     +  +++ S +++    + ++   + L++   + G +++A 
Sbjct: 375 EPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEAL 434

Query: 477 RVFSQLTAADVVS-WNSMIKAYSQNGRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSH 534
            V   +      S W S++ +    G    A ++ E++  +E   P N   L+ + A  +
Sbjct: 435 SVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYA--N 492

Query: 535 SGLVQDGQKVFESM 548
           +G+ +D ++V E M
Sbjct: 493 AGMWEDVKRVREMM 506



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 4/198 (2%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C++   L  G+  H  I K+    D  +  SL++MYAKCG+I     V  +M   D
Sbjct: 283 MLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKD 342

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + S N +LAG++ N    +A   F ++    ++PN  T+  +L+ C       EGK+L +
Sbjct: 343 LTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFS 402

Query: 243 QTMKLQYLSKTAVSNA-LLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDY 300
             M+   +  +    A L+ +  + G  ++A SV E +  R   S W +++N  + +G+ 
Sbjct: 403 NVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNV 462

Query: 301 EKPLRLVCLMREDGIDPN 318
              L  V   R   I+PN
Sbjct: 463 --ALAEVVAERLFEIEPN 478


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 182/560 (32%), Positives = 305/560 (54%), Gaps = 5/560 (0%)

Query: 110 SLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK 169
           S  +L DK     V+  C     +++G   H    K     D FV  +L+ MY   G+ +
Sbjct: 106 SGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKE 165

Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICG 229
           +   V   M    + S N ++ GY +N   + A + + ++  + V+P+  T  ++L  CG
Sbjct: 166 AAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACG 225

Query: 230 SLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTA 289
            L  ++ G+++H    +  +     V NAL+ MY+KCG M++A  + +G+  ++V++WT 
Sbjct: 226 LLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTT 285

Query: 290 IINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
           +ING+  +GD    L L  +M+ +G+ PN  +    L++C SL   + G   HA  I++ 
Sbjct: 286 LINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQK 345

Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS-SVSWNAQIAGFFRNQKTEEAIEA 408
           +     V TA+++MY+       + K    MG S   +  WNA ++GF +N+   EAIE 
Sbjct: 346 IESEVIVETALINMYAKCNCGNLSYKVF--MGTSKKRTAPWNALLSGFIQNRLAREAIEL 403

Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
           F QM+  D   D  T++S+L A ++L  L     IH  +++S F   + V S L++ Y+K
Sbjct: 404 FKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSK 463

Query: 469 CGSWEDAERVFS--QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFL 526
           CGS   A ++F+   L   D++ W+++I AY ++G  + A+ LF +MV  G++P + TF 
Sbjct: 464 CGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFT 523

Query: 527 AVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPI 586
           +VL ACSH+GLV +G  +F  M+K++ I+    HY+CM+DLLGRAG+L  A   I  +PI
Sbjct: 524 SVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPI 583

Query: 587 KPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
            P   +W  L  AC  H ++++ E  ++   +L+P++   YV L+ +YA  G   DAE  
Sbjct: 584 TPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERV 643

Query: 647 RKLMKMKEISKEPGCSWIEV 666
           R ++    + K P  S IEV
Sbjct: 644 RDMVNEVGLRKLPAHSLIEV 663



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 212/442 (47%), Gaps = 3/442 (0%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
           +R HALI    +     + + L   YA+C        +  ++    + S N ++  Y + 
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 197 ALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
                A + F+++ G     P+ +TY  ++  CG LS ID G  +H QT K  Y S T V
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
            N LL MY+  G  E A+ VF+ + +R VISW  +ING+ ++   E  + +   M + G+
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           +P+  T    L +C  L+N  +G   H  V ++G      V  A+VDMY   G++ EA  
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
             K M      V+W   I G+  N     A+     M       +  + +S+L AC  L 
Sbjct: 271 LAKGM-DDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLV 329

Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
            L   + +H+  ++ K ES V V ++LI  Y KC     + +VF   +      WN+++ 
Sbjct: 330 YLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLS 389

Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
            + QN  AR+AI LF++M+V+ ++P ++TF ++L A +    +Q    +   +++  G L
Sbjct: 390 GFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRS-GFL 448

Query: 556 PEEAHYSCMVDLLGRAGKLEIA 577
                 S +VD+  + G L  A
Sbjct: 449 YRLEVASILVDIYSKCGSLGYA 470



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 198/413 (47%), Gaps = 10/413 (2%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           E K+LHA  + L   S + + + L T Y +C     A  +F+ L Q  + SW A++  + 
Sbjct: 29  ETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYV 88

Query: 296 QHGDYEKPLRLVCLMREDGID-PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
           Q G     L L   M   G   P+++T+ V + +C  L    +G   H Q  K G     
Sbjct: 89  QIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDT 148

Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
           FV   ++ MY   GE  EA + + +  +  + +SWN  I G+FRN   E+A+  + +M+ 
Sbjct: 149 FVQNTLLAMYMNAGEK-EAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMD 207

Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
                D  T  S+L AC LL ++    ++H+ + +  F  N+ V ++L++ Y KCG  ++
Sbjct: 208 VGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKE 267

Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
           A  +   +   DVV+W ++I  Y  NG AR A++L   M  EG++P + +  ++LSAC  
Sbjct: 268 AWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGS 327

Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
              +  G+ +    +++  I  E    + ++++  +     ++         K TAP W 
Sbjct: 328 LVYLNHGKCLHAWAIRQ-KIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAP-WN 385

Query: 595 PLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEE 645
            L +    +   + A  + KQ+L  ++ PD A    T +++     + AD ++
Sbjct: 386 ALLSGFIQNRLAREAIELFKQMLVKDVQPDHA----TFNSLLPAYAILADLQQ 434



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 1/117 (0%)

Query: 426 SILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA 485
           S+L   S   S +  +++H+ I+     S+ ++ S L   Y +C     A  +F +L+  
Sbjct: 16  SLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQP 75

Query: 486 DVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDG 541
            + SWN+M++ Y Q GR   A+ LF +M+  G   P   T+  V+ AC    L+  G
Sbjct: 76  CLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVG 132


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 178/504 (35%), Positives = 298/504 (59%), Gaps = 12/504 (2%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG   HAQ +++   + T  SN L+ MY KCG++E A  +F+ +  R+++SW  ++    
Sbjct: 38  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 97

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+GD EK L L   M+++G   +E+T +  + +CA+          H   +K  +    F
Sbjct: 98  QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 157

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGTA++D+Y+  G + +A    + M +  S V+W++ +AG+ +N+  EEA+  F +    
Sbjct: 158 VGTALLDVYAKCGLVKDANLVFECMPER-SDVTWSSMVAGYVQNELYEEALVLFHRAQAM 216

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++FT SS L AC+   +L   +Q+ +   K+   SN+ V SSLI+ Y KCG  E+A
Sbjct: 217 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 276

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VFS +   +VV WN+++  +S++ R+ +A+I FEKM   GI P + T+++VLSACSH 
Sbjct: 277 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV+ G+K F+ M++ + + P   HYSCMVD+LGRAG L  A  FI  +P   TA +W  
Sbjct: 337 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 396

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L A+CR + +L++AE  +K + E++P +A  +V LSN+YA      +    R L+K  + 
Sbjct: 397 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 456

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            KE G SWIE+ +K++ F    ++H  + ++Y KL+ L+ +++ IG+            +
Sbjct: 457 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 516

Query: 705 NEKEDRVLYHSERLAVGFGLISLP 728
           + K++ + +HSE+LA+ FG++ LP
Sbjct: 517 SRKQELLRHHSEKLALTFGIMVLP 540



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 162/299 (54%), Gaps = 1/299 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   HA I +  +  D   +  L+NMY+KCG ++S   +  +MP   + S N ++  + +
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   ++A   F+++       + +T S+++  C +   + E KQLH   +K    S   V
Sbjct: 99  NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             ALL +Y KCG+++DA  VFE + +R+ ++W++++ G+ Q+  YE+ L L    +  G+
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 218

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N++T + AL++CA+      G    A   K G+    FV ++++DMY+  G I EA  
Sbjct: 219 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 278

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               + +  + V WNA ++GF R+ ++ EA+  F +M +     ++ TY S+L ACS L
Sbjct: 279 VFSSV-EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 336



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 156/288 (54%), Gaps = 3/288 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  V+  C+ + C+   ++ H    KTA+  + FV  +L+++YAKCG +K    V + MP
Sbjct: 124 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 183

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                + + ++AGY +N L+++A   F +   + ++ N +T S+ L+ C + +A+ EGKQ
Sbjct: 184 ERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ 243

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           + A + K    S   V ++L+ MY KCG++E+A +VF  + ++NV+ W AI++GF +H  
Sbjct: 244 VQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVR 303

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGT 358
             + +     M++ GI PN+ T+   L++C+ L     G  +   +I+   ++      +
Sbjct: 304 SLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYS 363

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG--FFRNQKTEE 404
            +VD+    G + EAK  +  M   A++  W + +A    +RN +  E
Sbjct: 364 CMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAE 411


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/650 (29%), Positives = 340/650 (52%), Gaps = 37/650 (5%)

Query: 118 QFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK- 176
            F   +L  C+    L+L   + +L T+  +       A L+ +Y+K GD+ S   +   
Sbjct: 26  HFYDHLLQCCTSLTTLKL--IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDH 83

Query: 177 ---------QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI 227
                    Q P  +   CN +L  YA      +A   ++ +  + V  N++TY  +L +
Sbjct: 84  RHHHHHGHTQAP--NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141

Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
           C S      G+ +H Q ++  + S   V  AL+ MY KCG + DA  VF+ ++ R+V+ W
Sbjct: 142 CASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCW 201

Query: 288 TAIINGFKQHGDYEKPLRLVCL---MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
           TA+I  ++Q    E+PL+ + L   M+E+G   +E T     ++   L +  M    H  
Sbjct: 202 TAMITLYEQ---AERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGY 258

Query: 345 VIKRGMALGDF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
            +  G  +GD  VG +IV MY+  G +  A+     M +  + +SWN+ ++G+ +N +  
Sbjct: 259 AVLNGF-IGDVSVGNSIVGMYAKCGNVERARLVFDRM-EERNGISWNSMLSGYTQNGRPT 316

Query: 404 EAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
           +A+  F+QM  ++   +  T   ++ ACS L S     ++H+ ++ SK + +  + ++++
Sbjct: 317 DALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIM 376

Query: 464 EAYNKCGSWEDAERVFS--QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
           + Y KCG  + A  +F+  +L   DV SWN +I  Y  +G  ++A+ LF +M VEG+ P 
Sbjct: 377 DMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPN 436

Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
           + TF ++LSACSH+GL+ +G+K F  M K   + PE  HY+CMVD+LGRAG L  A   I
Sbjct: 437 DITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLI 495

Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
             +P +P+  +W  L  ACR H + ++ E  +  + +L+P+    YV +SN+YA +    
Sbjct: 496 KKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWK 555

Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
           + E  R+ MK + + K    S IE   +++ F + ++S     +VY K++ L  +++ +G
Sbjct: 556 EVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVG 615

Query: 702 HT--------DNEKEDR---VLYHSERLAVGFGLISLPAKNKFECSRTLE 740
           +         D E ED+   + YHSE+LAV FG++ +      + ++ L 
Sbjct: 616 YVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLR 665


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 321/625 (51%), Gaps = 19/625 (3%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ + ++L   +R   L  G + HA + K     D  +  +L++MYAKCG +     V  
Sbjct: 200 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 259

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            MP  ++ S   L+ G+  +    +    F ++ G    PN +T S  L  CG       
Sbjct: 260 GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRA 317

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G Q+H   ++  +     V+N+L+ MY K     DA  VF+ +  RN+ +W ++I+G+  
Sbjct: 318 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH 377

Query: 297 HGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM--ALG 353
            G     L +   M R     P+E+TF   L +C+ L  +  G   HA +  RG+  A  
Sbjct: 378 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASN 437

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +  A++D+Y     +  A +    + +  +++ W   I G  +  + +EA+  F +  
Sbjct: 438 AILAGALLDVYVKCHRLPVAMQVFDGLERR-NAIQWTTVIVGHAQEGQVKEAMCLFRRFW 496

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +    D    SS++   +    +   +Q+H    K+    +V V +SL++ Y KCG   
Sbjct: 497 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 556

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +A R F ++ A +VVSW +MI    ++G  R+AI LFE+M  EG+      +LA+LSACS
Sbjct: 557 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 616

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGLV + ++ F  + ++  + P+  HY+CMVDLLGRAG+L  A   I ++P++PT  +W
Sbjct: 617 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 676

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           + L +ACR H D+ +   +   +L +D D+   YV LSN+ AEAG   + +  R  M+ K
Sbjct: 677 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 736

Query: 654 EISKEPGCSWIEVYNKIYRFF-SQNKSHSEMPKVYEKLKQLMQQI-EDIGHT-------- 703
            + K+ GCSW EV  +++ F+   + +H +   +   L+++  ++ E +G++        
Sbjct: 737 GLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 796

Query: 704 DNEKEDRV---LYHSERLAVGFGLI 725
           D ++E RV     HSERLAVG  L+
Sbjct: 797 DVDEESRVESLREHSERLAVGLWLL 821


>gi|147864762|emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 178/504 (35%), Positives = 297/504 (58%), Gaps = 12/504 (2%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG   HAQ +++   + T  SN L+ MY KCG++E A  +F+ +  R+++SW  ++    
Sbjct: 65  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+GD EK L L   M+++GI  +E+T +  + +CA+          H   +K  +    F
Sbjct: 125 QNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGTA++D+Y+  G + +A    + M +  S V+W++ +AG+ +N+  EEA+  F +    
Sbjct: 185 VGTALLDVYAKCGLVKDASLVFECMPER-SDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++FT SS L AC+   +L   +Q+ + + K+   SN+ V SSLI+ Y KCG  E+A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VFS +   +VV WN+M+  +S++ R+ +A+I FEKM   GI P   T+++VL+ACSH 
Sbjct: 304 YIVFSSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHL 363

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV+ G+K F+ M++ + + P   HYSCMVD+LGRAG L  A   I  +P   TA +W  
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGS 423

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L A+CR + +L+ AE  +K + E++P +A  +V LSN+YA      +    R L+K  + 
Sbjct: 424 LLASCRIYRNLEXAEVAAKHLFEIEPHNAGNHVLLSNIYAANNRWEEVARARNLLKESKA 483

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            KE G SWIE+ +K++ F    ++H  + ++Y KL+ L+ +++ IG+            +
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 543

Query: 705 NEKEDRVLYHSERLAVGFGLISLP 728
           + K++ + +HSE+LA+ FG++ LP
Sbjct: 544 SRKQELLRHHSEKLALTFGIMVLP 567



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 188/361 (52%), Gaps = 3/361 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   HA I +  +  D   +  L+NMY+KCG ++S   +  +MP   + S N ++  + +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   ++A   F+++    +  + +T S+++  C +   + E KQLH   +K    S   V
Sbjct: 126 NGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             ALL +Y KCG+++DA  VFE + +R+ ++W++++ G+ Q+  YE+ L L    +  G+
Sbjct: 186 GTALLDVYAKCGLVKDASLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N++T + AL++CA+      G    A + K G+    FV ++++DMY+  G I EA  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYI 305

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
               + +  + V WNA ++GF R+ ++ EA+  F +M +     +E TY S+L ACS L 
Sbjct: 306 VFSSV-EEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEITYISVLTACSHLG 364

Query: 436 SLATCEQIHSRIVK-SKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT-AADVVSWNSM 493
            +    +    +++      NV   S +++   + G   +A+ +  ++   A    W S+
Sbjct: 365 LVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDLIDRMPFDATASMWGSL 424

Query: 494 I 494
           +
Sbjct: 425 L 425



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 153/288 (53%), Gaps = 3/288 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  V+  C+ + C+   ++ H    KTA+  + FV  +L+++YAKCG +K    V + MP
Sbjct: 151 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMP 210

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                + + ++AGY +N L+++A   F +   + ++ N +T S+ L+ C + +A+ EGKQ
Sbjct: 211 ERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ 270

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           + A   K    S   V ++L+ MY KCG++E+A  VF  + ++NV+ W A+++GF +H  
Sbjct: 271 VQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVFSSVEEKNVVLWNAMLSGFSRHVR 330

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGT 358
             + +     M++ GI PNE T+   L +C+ L     G  +   +I+   ++      +
Sbjct: 331 SLEAMIYFEKMQQMGICPNEITYISVLTACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYS 390

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG--FFRNQKTEE 404
            +VD+    G + EAK  +  M   A++  W + +A    +RN +  E
Sbjct: 391 CMVDILGRAGLLHEAKDLIDRMPFDATASMWGSLLASCRIYRNLEXAE 438


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 178/504 (35%), Positives = 298/504 (59%), Gaps = 12/504 (2%)

Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
           EG   HAQ +++   + T  SN L+ MY KCG++E A  +F+ +  R+++SW  ++    
Sbjct: 65  EGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHT 124

Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
           Q+GD EK L L   M+++G   +E+T +  + +CA+          H   +K  +    F
Sbjct: 125 QNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVF 184

Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
           VGTA++D+Y+  G + +A    + M +  S V+W++ +AG+ +N+  EEA+  F +    
Sbjct: 185 VGTALLDVYAKCGLVKDANLVFECMPER-SDVTWSSMVAGYVQNELYEEALVLFHRAQAM 243

Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
               ++FT SS L AC+   +L   +Q+ +   K+   SN+ V SSLI+ Y KCG  E+A
Sbjct: 244 GLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEA 303

Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
             VFS +   +VV WN+++  +S++ R+ +A+I FEKM   GI P + T+++VLSACSH 
Sbjct: 304 YTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363

Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
           GLV+ G+K F+ M++ + + P   HYSCMVD+LGRAG L  A  FI  +P   TA +W  
Sbjct: 364 GLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGS 423

Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
           L A+CR + +L++AE  +K + E++P +A  +V LSN+YA      +    R L+K  + 
Sbjct: 424 LLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKA 483

Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------D 704
            KE G SWIE+ +K++ F    ++H  + ++Y KL+ L+ +++ IG+            +
Sbjct: 484 KKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEE 543

Query: 705 NEKEDRVLYHSERLAVGFGLISLP 728
           + K++ + +HSE+LA+ FG++ LP
Sbjct: 544 SRKQELLRHHSEKLALTFGIMVLP 567



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 162/299 (54%), Gaps = 1/299 (0%)

Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
           G   HA I +  +  D   +  L+NMY+KCG ++S   +  +MP   + S N ++  + +
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125

Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
           N   ++A   F+++       + +T S+++  C +   + E KQLH   +K    S   V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185

Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
             ALL +Y KCG+++DA  VFE + +R+ ++W++++ G+ Q+  YE+ L L    +  G+
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGL 245

Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
           + N++T + AL++CA+      G    A   K G+    FV ++++DMY+  G I EA  
Sbjct: 246 EHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYT 305

Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
               + +  + V WNA ++GF R+ ++ EA+  F +M +     ++ TY S+L ACS L
Sbjct: 306 VFSSV-EEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHL 363



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 156/288 (54%), Gaps = 3/288 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           V  V+  C+ + C+   ++ H    KTA+  + FV  +L+++YAKCG +K    V + MP
Sbjct: 151 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 210

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
                + + ++AGY +N L+++A   F +   + ++ N +T S+ L+ C + +A+ EGKQ
Sbjct: 211 ERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ 270

Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
           + A + K    S   V ++L+ MY KCG++E+A +VF  + ++NV+ W AI++GF +H  
Sbjct: 271 VQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVR 330

Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIK-RGMALGDFVGT 358
             + +     M++ GI PN+ T+   L++C+ L     G  +   +I+   ++      +
Sbjct: 331 SLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYS 390

Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG--FFRNQKTEE 404
            +VD+    G + EAK  +  M   A++  W + +A    +RN +  E
Sbjct: 391 CMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAE 438


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/528 (34%), Positives = 299/528 (56%), Gaps = 16/528 (3%)

Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
           + +L  C     +D+GKQ+H    KL +     V N+++ MY KCGM+ +A  VF  L  
Sbjct: 8   NKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLPV 67

Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
           RNVISW A+I G+    + E+ L L   MRE G  P+ YT++ +L +C+    +  G   
Sbjct: 68  RNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQI 127

Query: 342 HAQVIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
           HA +I+ G        V  A+VD+Y     + EA+K    + +  S +SW+  I G+ + 
Sbjct: 128 HAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRI-EEKSVMSWSTLILGYAQE 186

Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES-NVHV 458
              +EA++ F ++  +    D F  SSI+   +    L   +Q+H+  +K  +    + V
Sbjct: 187 DNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSV 246

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
            +S+++ Y KCG   +A+ +F ++   +VVSW  MI  Y ++G   KA+ LF +M   GI
Sbjct: 247 ANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGI 306

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
            P + T+LAVLSACSHSGL+++G+K F  +     I P+  HY+CMVDLLGR G+L+ A 
Sbjct: 307 EPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAK 366

Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
             I  +P+KP   IW+ L + CR H D++M + + + +L  + ++ A YV +SNMYA AG
Sbjct: 367 NLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAG 426

Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI- 697
              ++E+ R+ +K K + KE G SW+E+  +I+ F++ +  H  + +++E LK++ +++ 
Sbjct: 427 YWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEMEKRVK 486

Query: 698 EDIGHT--------DNEKEDR---VLYHSERLAVGFGLISLPAKNKFE 734
           E++G+         D E+E +   +  HSE+LA+G  L+    K K E
Sbjct: 487 EEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGE 534



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 218/465 (46%), Gaps = 49/465 (10%)

Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
           + + + ++L+ CS+   L+ G++ H ++ K        V  S+++MY+KCG +     V 
Sbjct: 3   ESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVF 62

Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
             +P  ++ S N ++AGY      ++A + F ++      P+ YTYS+ L  C    A  
Sbjct: 63  NTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG 122

Query: 236 EGKQLHAQTMK--LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
           EG Q+HA  ++    YL+++AV+ AL+ +Y+KC  M +A  VF+ + +++V+SW+ +I G
Sbjct: 123 EGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182

Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
           + Q  + ++ + L   +RE     + +  +  +   A       G   HA  IK    L 
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLL 242

Query: 354 DF-VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
           +  V  +++DMY   G   EA    +EM    + VSW   I G+ ++    +A+E F++M
Sbjct: 243 EMSVANSVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHGIGNKAVELFNEM 301

Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
             N    D  TY ++L ACS           HS ++K                       
Sbjct: 302 QENGIEPDSVTYLAVLSACS-----------HSGLIK----------------------- 327

Query: 473 EDAERVFS-----QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLA 527
            + ++ FS     Q     V  +  M+    + GR ++A  L EKM    ++P    +  
Sbjct: 328 -EGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIEKMP---LKPNVGIWQT 383

Query: 528 VLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
           +LS C   G V+ G++V E +++  G  P  A+Y  + ++   AG
Sbjct: 384 LLSVCRMHGDVEMGKQVGEILLRREGNNP--ANYVMVSNMYAHAG 426


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/548 (33%), Positives = 300/548 (54%), Gaps = 31/548 (5%)

Query: 216 PNHYTYSTM-LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK-CGM----- 268
           PN  + +T  L++    +++ E KQL A  +K    S  +V    LT +I  C +     
Sbjct: 14  PNSNSNTTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSV----LTKFINFCSLNPTTT 69

Query: 269 -MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE---DGIDPNEYTFTV 324
            M+ A  +F+ + Q +++ +  +  G+ +    + PLR   L  +    G+ P++YTF  
Sbjct: 70  SMQHAHHLFDQIPQPDIVLFNTMARGYAR---TDTPLRAFTLFTQILFSGLFPDDYTFPS 126

Query: 325 ALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSA 384
            L +CAS +    G   H   IK G++   +V   +++MY+   E+  A++   ++ +  
Sbjct: 127 LLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC 186

Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
             V++NA I G+ R  +  EA+  F ++   +    + T  S+L +C+LL +L   + +H
Sbjct: 187 V-VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMH 245

Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR 504
             + K+ F   V V ++LI+ Y KCGS +DA  VF  +   D  +W++MI AY+ +G   
Sbjct: 246 EYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGL 305

Query: 505 KAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
           KA+ LF++M   G  P   TFL +L ACSH+GLV++G + F  M  +YG++P   HY CM
Sbjct: 306 KAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCM 365

Query: 565 VDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDA 624
           VDLLGRAG+LE A  FI  LPI+PT  +WR L +AC  H ++++ + + +QI ELD    
Sbjct: 366 VDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHG 425

Query: 625 AVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMP 684
             Y+ LSN+ A AG   D    RKLM  + + K PGCS +EV N ++ FFS +  HS   
Sbjct: 426 GDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVST 485

Query: 685 KVYEKLKQLMQQIEDIGHT------------DNEKEDRVLYHSERLAVGFGLISLPAKNK 732
           K+++ L +L+++++ +G+             D EKE  + YHSE+LA+ FGL++ P    
Sbjct: 486 KLHQALDELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTT 545

Query: 733 FECSRTLE 740
               + L 
Sbjct: 546 IRVVKNLR 553



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 195/445 (43%), Gaps = 45/445 (10%)

Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVA---VVKQMPYLDIASCNCLLAGY 193
           ++  A   KT +  D  V    +N  +      SM     +  Q+P  DI   N +  GY
Sbjct: 37  KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96

Query: 194 AKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
           A+     +AF+ F ++    + P+ YT+ ++L  C S  A++EG+QLH   +KL      
Sbjct: 97  ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156

Query: 254 AVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
            V   L+ MY  C  M+ A  VF+ + +  V+++ A+I G+ +     + L L   ++  
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQAR 216

Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
            + P + T    L+SCA L    +G   H  V K G      V TA++DMY+  G + +A
Sbjct: 217 NLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDA 276

Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
               + M    +  +W+A I  +  +    +A+  F +M +     DE T+  +L ACS 
Sbjct: 277 VCVFENMAVRDTQ-AWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACS- 334

Query: 434 LPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSM 493
                     H+ +V+  FE             +K G                +  +  M
Sbjct: 335 ----------HTGLVEEGFE-------YFYGMRDKYG------------VIPGIKHYGCM 365

Query: 494 IKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYG 553
           +    + GR  +A   +E +V   IRPT   +  +LSAC   G V+ G++V E + +   
Sbjct: 366 VDLLGRAGRLEEA---YEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFEL-- 420

Query: 554 ILPEEAH---YSCMVDLLGRAGKLE 575
              +++H   Y  + +L  RAG+ E
Sbjct: 421 ---DDSHGGDYIILSNLCARAGRWE 442



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 1/295 (0%)

Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
           +L  C+  + LE GR+ H L  K  +  + +V  +L+NMY  C ++     V  ++    
Sbjct: 127 LLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC 186

Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
           + + N ++ GYA+ +  ++A S F +L   +++P   T  ++L+ C  L A+D GK +H 
Sbjct: 187 VVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE 246

Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
              K  +     V  AL+ MY KCG ++DA  VFE +  R+  +W+A+I  +  HG   K
Sbjct: 247 YVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLK 306

Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIV 361
            + L   MR+ G +P+E TF   L +C+       G+  F+    K G+  G      +V
Sbjct: 307 AVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMV 366

Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
           D+    G + EA + +  +    + + W   ++    +   E       Q+   D
Sbjct: 367 DLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELD 421



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 2/190 (1%)

Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
           ++ VLS C+    L+LG+  H  + K        V  +L++MYAKCG +   V V + M 
Sbjct: 225 MLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMA 284

Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEG-K 238
             D  + + ++  YA +    +A S F ++     +P+  T+  +L  C     ++EG +
Sbjct: 285 VRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFE 344

Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
             +    K   +        ++ +  + G +E+A     GL ++   I W  +++    H
Sbjct: 345 YFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSH 404

Query: 298 GDYEKPLRLV 307
           G+ E   R++
Sbjct: 405 GNVELGKRVI 414


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 188/625 (30%), Positives = 321/625 (51%), Gaps = 19/625 (3%)

Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
           ++ + ++L   +R   L  G + HA + K     D  +  +L++MYAKCG +     V  
Sbjct: 4   RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63

Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
            MP  ++ S   L+ G+  +    +    F ++ G    PN +T S  L  CG       
Sbjct: 64  GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRA 121

Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
           G Q+H   ++  +     V+N+L+ MY K     DA  VF+ +  RN+ +W ++I+G+  
Sbjct: 122 GVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAH 181

Query: 297 HGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM--ALG 353
            G     L +   M R     P+E+TF   L +C+ L  +  G   HA +  RG+  A  
Sbjct: 182 AGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASN 241

Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
             +  A++D+Y     +  A +    + +  +++ W   I G  +  + +EA+  F +  
Sbjct: 242 AILAGALLDVYVKCHRLPVAMQVFDGLERR-NAIQWTTVIVGHAQEGQVKEAMCLFRRFW 300

Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
            +    D    SS++   +    +   +Q+H    K+    +V V +SL++ Y KCG   
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360

Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
           +A R F ++ A +VVSW +MI    ++G  R+AI LFE+M  EG+      +LA+LSACS
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 420

Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
           HSGLV + ++ F  + ++  + P+  HY+CMVDLLGRAG+L  A   I ++P++PT  +W
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480

Query: 594 RPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK 653
           + L +ACR H D+ +   +   +L +D D+   YV LSN+ AEAG   + +  R  M+ K
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 540

Query: 654 EISKEPGCSWIEVYNKIYRFF-SQNKSHSEMPKVYEKLKQLMQQI-EDIGHT-------- 703
            + K+ GCSW EV  +++ F+   + +H +   +   L+++  ++ E +G++        
Sbjct: 541 GLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 600

Query: 704 DNEKEDRV---LYHSERLAVGFGLI 725
           D ++E RV     HSERLAVG  L+
Sbjct: 601 DVDEESRVESLREHSERLAVGLWLL 625


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/574 (30%), Positives = 295/574 (51%), Gaps = 50/574 (8%)

Query: 115 LDKQFVIEVLSYCSREECLELG--------------RRYHALITKTAVCGDQFVTASLVN 160
           +D   +  VL  CSR  C E G              ++ H L  K     D  +  SL++
Sbjct: 207 VDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLD 266

Query: 161 MYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
           MYAK G++ S   +   MP + + S N ++AGY + +   +A  +  ++     +P+  T
Sbjct: 267 MYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEIT 326

Query: 221 YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLV 280
           Y  ML  C                                   IK G +E    +F+G+ 
Sbjct: 327 YVNMLVAC-----------------------------------IKSGDIEAGRQMFDGMS 351

Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
             ++ SW  I++G+ Q+ ++++ ++L   M+   + P+  T  + L+S A +     G  
Sbjct: 352 SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQ 411

Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
            HA   K       ++ + ++ MYS  G++  AK+    + +    V WN+ +AG   N 
Sbjct: 412 VHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAE-LDIVCWNSMMAGLSLNS 470

Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGS 460
             +EA   F +M        +F+Y+++L  C+ L SL+   Q+HS+I +  + ++  VGS
Sbjct: 471 LDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGS 530

Query: 461 SLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
           +LI+ Y+KCG  + A  VF  +   + V+WN MI  Y+QNG   +A++L+E M+  G +P
Sbjct: 531 ALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKP 590

Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
              TF+AVL+ACSHSGLV  G K+F SM +E+G+ P   HY+C++D LGRAG+L  A + 
Sbjct: 591 DGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVL 650

Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
           I  +P K    IW  L ++CR ++D+ +A   ++++  LDP ++A YV L+N+Y+  G  
Sbjct: 651 IDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRW 710

Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
            DA+  R+LM   ++ K+PG SWIE  N +  F 
Sbjct: 711 DDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFM 744



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 214/480 (44%), Gaps = 63/480 (13%)

Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
           ++  +L  C  ++    G+  HA + ++ +  D F++  L+  YAKC  I +   +  QM
Sbjct: 7   YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66

Query: 179 PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAI------CGSLS 232
           P  DI + N +L  Y K +  + A   F ++     + N  +++T+++       CG+L 
Sbjct: 67  PKRDIYTWNAILGAYCKASELEDAHVLFAEMP----ERNIVSWNTLISALTRNGACGALV 122

Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
            ++ G++ H  ++K+   +   V NALL MY KC  + DA   F  + + N +S+TA++ 
Sbjct: 123 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 182

Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS--------------LRNSHMG 338
           G        +  RL  LM  + I  +  + +  L  C+               L +   G
Sbjct: 183 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 242

Query: 339 YMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFR 398
              H   IK G      +  +++DMY+  G +  A+     M    S VSWN  IAG+ +
Sbjct: 243 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNM-PEVSVVSWNVMIAGYGQ 301

Query: 399 NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHV 458
             ++ +AIE   +M  +    DE TY ++L AC                           
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI-------------------------- 335

Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
                    K G  E   ++F  +++  + SWN+++  YSQN   ++A+ LF +M    +
Sbjct: 336 ---------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSV 386

Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIA 577
            P  +T   +LS+ +   L++ G++V    V +  +   + +  S ++ +  + GK+E+A
Sbjct: 387 HPDRTTLAIILSSLAGMMLLEGGRQVHA--VSQKAVFRTDIYLASGLIGMYSKCGKVEMA 444



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/383 (21%), Positives = 167/383 (43%), Gaps = 29/383 (7%)

Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
           L +C   +    G + HA +++  ++   F+   +++ Y+    I  +++   +M K   
Sbjct: 12  LQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKR-D 70

Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK--ACSLLPSLATCEQI 443
             +WNA +  + +  + E+A   F++M   +        S++ +  AC  L  +    + 
Sbjct: 71  IYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRC 130

Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
           H   +K   ++N++VG++L+  Y KC    DA + F  +   + VS+ +M+   + + + 
Sbjct: 131 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 190

Query: 504 RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGL----VQDGQKVFESMVK--------- 550
            +A  LF  M+   I   + +  +VL  CS  G     + D   V  S V          
Sbjct: 191 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 250

Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL-KMA 609
           ++G   +    + ++D+  + G ++ A +   N+P + +   W  + A     S   K  
Sbjct: 251 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAGYGQKSQSSKAI 309

Query: 610 EFISK-QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYN 668
           E++ + Q    +PD+    +T  NM        D E  R++     +S     SW    N
Sbjct: 310 EYLQRMQYHGFEPDE----ITYVNMLVACIKSGDIEAGRQMFD--GMSSPSLSSW----N 359

Query: 669 KIYRFFSQNKSHSEMPKVYEKLK 691
            I   +SQN++H E  K++ +++
Sbjct: 360 TILSGYSQNENHKEAVKLFREMQ 382


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.133    0.393 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,054,188,454
Number of Sequences: 23463169
Number of extensions: 444909913
Number of successful extensions: 1267794
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8940
Number of HSP's successfully gapped in prelim test: 3084
Number of HSP's that attempted gapping in prelim test: 1079722
Number of HSP's gapped (non-prelim): 63854
length of query: 742
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 592
effective length of database: 8,839,720,017
effective search space: 5233114250064
effective search space used: 5233114250064
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)