BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044169
(742 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/607 (36%), Positives = 357/607 (58%), Gaps = 20/607 (3%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
G + H ++ K + V+ SL+N+Y KCG+++ + + + + N +++GYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
N L +A F + V+ + ++++++ +C +L + +QLH +K +L +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 256 SNALLTMYIKCGMMEDAESVFE--GLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
AL+ Y KC M DA +F+ G V NV+SWTA+I+GF Q+ E+ + L M+
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 314 GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEA 373
G+ PNE+T++V L + + S + HAQV+K VGTA++D Y LG++ EA
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 374 KKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSL 433
K + V+W+A +AG+ + +TE AI+ F ++ + +EFT+SSIL C+
Sbjct: 448 AKVFSGI-DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAA 506
Query: 434 L-PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
S+ +Q H +KS+ +S++ V S+L+ Y K G+ E AE VF + D+VSWNS
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
MI Y+Q+G+A KA+ +F++M ++ TF+ V +AC+H+GLV++G+K F+ MV++
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
I P + H SCMVDL RAG+LE A+ I N+P + IWR + AACR H ++
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLA 686
Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
+++I+ + P+D+A YV LSNMYAE+G + + RKLM + + KEPG SWIEV NK Y
Sbjct: 687 AEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYS 746
Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGH----------TDNEKEDRVL-YHSERLAVG 721
F + ++SH ++Y KL+ L +++D+G+ D+E ++ VL HSERLA+
Sbjct: 747 FLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
Query: 722 FGLISLP 728
FGLI+ P
Sbjct: 807 FGLIATP 813
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 264/533 (49%), Gaps = 28/533 (5%)
Query: 46 YSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVP 105
Y+A LF+KSP R S L+F G SR+G + + +
Sbjct: 44 YNAHNLFDKSPGRDRESYISLLF---------GFSRDGRTQE-------------AKRLF 81
Query: 106 VTCYSLESLLDKQFVIEVLSYCSREECLEL-GRRYHALITKTAVCGDQFVTASLVNMYAK 164
+ + L +D VL S C EL GR+ H K D V SLV+ Y K
Sbjct: 82 LNIHRLGMEMDCSIFSSVLK-VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 140
Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTM 224
+ K V +M ++ + L++GYA+N++ D+ + F+++ QPN +T++
Sbjct: 141 GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 225 LAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNV 284
L + G Q+H +K VSN+L+ +Y+KCG + A +F+ ++V
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
++W ++I+G+ +G + L + MR + + +E +F + CA+L+ H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEE 404
V+K G + TA++ YS + +A + KE+G + VSW A I+GF +N EE
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 405 AIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIE 464
A++ FS+M R +EFTYS IL A LP ++ E +H+++VK+ +E + VG++L++
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLD 436
Query: 465 AYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNST 524
AY K G E+A +VFS + D+V+W++M+ Y+Q G AI +F ++ GI+P T
Sbjct: 437 AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFT 496
Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
F ++L+ C+ + K F + + S ++ + + G +E A
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/625 (34%), Positives = 354/625 (56%), Gaps = 12/625 (1%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + ++ CS + L G++ HA TK + + +L+N+YAKC DI++ +
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
+ ++ N +L Y +F F ++ ++ PN YTY ++L C L ++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
G+Q+H+Q +K + V + L+ MY K G ++ A + ++V+SWT +I G+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
Q+ +K L M + GI +E T A+++CA L+ G HAQ G +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
A+V +YS G+I E+ E ++ +++WNA ++GF ++ EEA+ F +M R
Sbjct: 628 FQNALVTLYSRCGKIEESYLAF-EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
+ FT+ S +KA S ++ +Q+H+ I K+ ++S V ++LI Y KCGS DA
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
E+ F +++ + VSWN++I AYS++G +A+ F++M+ +RP + T + VLSACSH
Sbjct: 747 EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
GLV G FESM EYG+ P+ HY C+VD+L RAG L A FI +PIKP A +WR
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
L +AC H ++++ EF + +LEL+P+D+A YV LSN+YA + + R+ MK K +
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGV 926
Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---------- 705
KEPG SWIEV N I+ F+ +++H +++E + L ++ +IG+ +
Sbjct: 927 KKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQH 986
Query: 706 EKEDRVLY-HSERLAVGFGLISLPA 729
E++D +++ HSE+LA+ FGL+SLPA
Sbjct: 987 EQKDPIIFIHSEKLAISFGLLSLPA 1011
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 269/575 (46%), Gaps = 52/575 (9%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
VLS C + E LE+G + H L+ K D +V +LV++Y G++ S + M D
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 183 IASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
+ N L+ G ++ ++A F + LDG+ +P+ T ++++ C + + G+QL
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGL--EPDSNTLASLVVACSADGTLFRGQQL 411
Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
HA T KL + S + ALL +Y KC +E A F NV+ W ++ + D
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
R+ M+ + I PN+YT+ L +C L + +G H+Q+IK L +V + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 361 VDMYSGLGEIWEAKKQL-KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
+DMY+ LG++ A L + GK VSW IAG+ + ++A+ F QM+
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDV--VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
DE ++ + AC+ L +L +QIH++ S F S++ ++L+ Y++CG E++ F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
Q A D ++WN+++ + Q+G +A+ +F +M EGI N TF + + A S + ++
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
G++V + K G + E+ IS ++A
Sbjct: 710 QGKQVHAVITKT-----------------GYDSETEVCNALIS-------------MYAK 739
Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE- 658
C SD + KQ LE+ + + + N Y++ G ++A + M +
Sbjct: 740 CGSISDAE------KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 659 -------PGCSWIEVYNK-IYRFFSQNKSHSEMPK 685
CS I + +K I F S N + PK
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 213/437 (48%), Gaps = 8/437 (1%)
Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
Y L T VC L+++Y++ G + V + D +S +++G +KN
Sbjct: 215 YQGLRDSTVVCN------PLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
+A F + + + P Y +S++L+ C + +++ G+QLH +KL + S T V NA
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
L+++Y G + AE +F + QR+ +++ +ING Q G EK + L M DG++P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
T + +C++ G HA K G A + + A++++Y+ +I A
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
E + + V WN + + + F QM + +++TY SILK C L L
Sbjct: 449 ET-EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
EQIHS+I+K+ F+ N +V S LI+ Y K G + A + + DVVSW +MI Y+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
Q KA+ F +M+ GIR +SAC+ +++GQ++ G +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626
Query: 559 AHYSCMVDLLGRAGKLE 575
+ +V L R GK+E
Sbjct: 627 PFQNALVTLYSRCGKIE 643
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 247/518 (47%), Gaps = 9/518 (1%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
L+ GR+ H+ I K + + ++ L + Y GD+ V +MP I + N ++
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLS 251
A L + F F+++ +V PN T+S +L C G A D +Q+HA+ +
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
T V N L+ +Y + G ++ A VF+GL ++ SW A+I+G ++ + +RL C M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
GI P Y F+ L++C + + +G H V+K G + +V A+V +Y LG +
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
A+ M + +V++N I G + E+A+E F +M + D T +S++ AC
Sbjct: 341 SAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
S +L +Q+H+ K F SN + +L+ Y KC E A F + +VV WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
M+ AY R + +F +M +E I P T+ ++L C G ++ G+++ ++K
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 552 YGILPEEAHYSC--MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
L Y C ++D+ + GKL+ A + K W + A ++ A
Sbjct: 520 NFQLNA---YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAGYTQYNFDDKA 575
Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQR 647
+Q+L+ V +T + + A AGLQA E Q+
Sbjct: 576 LTTFRQMLDRGIRSDEVGLT-NAVSACAGLQALKEGQQ 612
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 16/425 (3%)
Query: 208 KLDGID---VQPNHYTYSTMLAIC-GSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY 263
++D ++ ++PNH T +L C + ++DEG++LH+Q +KL S +S L Y
Sbjct: 71 RIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFY 130
Query: 264 IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFT 323
+ G + A VF+ + +R + +W +I + L M + + PNE TF+
Sbjct: 131 LFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 324 VALASCASLRNSHMGY----MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
L +C R + + HA+++ +G+ V ++D+YS G + A++
Sbjct: 191 GVLEAC---RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDG 247
Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
+ S SW A I+G +N+ EAI F M + +SS+L AC + SL
Sbjct: 248 LRLKDHS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
EQ+H ++K F S+ +V ++L+ Y G+ AE +FS ++ D V++N++I SQ
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQ 366
Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
G KA+ LF++M ++G+ P ++T +++ ACS G + GQ++ + + G
Sbjct: 367 CGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNK 425
Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLK--MAEFISKQIL 617
+++L + +E AL + ++ +W + A DL+ F QI
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVV-LWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 618 ELDPD 622
E+ P+
Sbjct: 485 EIVPN 489
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/588 (35%), Positives = 338/588 (57%), Gaps = 5/588 (0%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + VLS CS LE G++ HA I + + D + L++ Y KCG + + +
Sbjct: 248 DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
MP +I S LL+GY +NAL +A F + ++P+ Y S++L C SL A+
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG 367
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
G Q+HA T+K + + V+N+L+ MY KC + DA VF+ +V+ + A+I G+
Sbjct: 368 FGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 296 QHG---DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
+ G + + L + MR I P+ TF L + ASL + + H + K G+ L
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNL 487
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
F G+A++D+YS + +++ EM K V WN+ AG+ + + EEA+ F ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
+ DEFT+++++ A L S+ ++ H +++K E N ++ ++L++ Y KCGS
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
EDA + F + DVV WNS+I +Y+ +G +KA+ + EKM+ EGI P TF+ VLSAC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
SH+GLV+DG K FE M++ +GI PE HY CMV LLGRAG+L A I +P KP A +
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
WR L + C ++++AE ++ + DP D+ + LSN+YA G+ +A++ R+ MK+
Sbjct: 726 WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKV 785
Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDI 700
+ + KEPG SWI + +++ F S++KSH + ++YE L L+ QI +
Sbjct: 786 EGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 248/515 (48%), Gaps = 7/515 (1%)
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
+ + K+ D +V L++ Y K G+I V +P + +++G K
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230
Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
+ F +L +V P+ Y ST+L+ C L ++ GKQ+HA ++ ++ N L
Sbjct: 231 YVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVL 290
Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
+ Y+KCG + A +F G+ +N+ISWT +++G+KQ+ +++ + L M + G+ P+
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
Y + L SCASL G HA IK + +V +++DMY+ + +A+K +
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF-D 409
Query: 380 MGKSASSVSWNAQIAGFFR---NQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPS 436
+ +A V +NA I G+ R + EA+ F M T+ S+L+A + L S
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 437 LATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKA 496
L +QIH + K ++ GS+LI+ Y+ C +D+ VF ++ D+V WNSM
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAG 529
Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
Y Q +A+ LF ++ + RP TF +++A + VQ GQ+ F + + G+
Sbjct: 530 YVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLEC 588
Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-EFISKQ 615
+ ++D+ + G E A + + W + ++ H + K A + + K
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV-CWNSVISSYANHGEGKKALQMLEKM 647
Query: 616 ILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
+ E + +V + + + AGL D +Q +LM
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 249/509 (48%), Gaps = 19/509 (3%)
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
H I + D +++ L+N+Y++ G + V ++MP ++ S + +++ + ++
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 200 DQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGK----QLHAQTMKLQYLSKTA 254
+++ FL+ PN Y S+ + C L G+ QL + +K +
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVY 184
Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
V L+ Y+K G ++ A VF+ L +++ ++WT +I+G + G L+L + ED
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
+ P+ Y + L++C+ L G HA +++ G+ + + ++D Y G + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
K M + + +SW ++G+ +N +EA+E F+ M + D + SSIL +C+ L
Sbjct: 305 KLFNGM-PNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
+L Q+H+ +K+ ++ +V +SLI+ Y KC DA +VF AADVV +N+MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 495 KAYSQNG---RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
+ YS+ G +A+ +F M IRP+ TF+++L A + + +++ M K
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK- 482
Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA-- 609
YG+ + S ++D+ L+ + + + +K IW +FA S+ + A
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV-IWNSMFAGYVQQSENEEALN 541
Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAG 638
F+ Q+ PD+ T +NM AG
Sbjct: 542 LFLELQLSRERPDE----FTFANMVTAAG 566
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 165/314 (52%), Gaps = 4/314 (1%)
Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
+H Q + T +SN L+ +Y + G M A VFE + +RN++SW+ +++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 300 YEKPLRLVC-LMREDGIDPNEYTFTVALASCASL--RNSHMGYMFHAQVIKRGMALGDFV 356
YE+ L + R PNEY + + +C+ L R M + + ++K G +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
GT ++D Y G I A+ + + S+V+W I+G + ++ +++ F Q++ ++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
D + S++L ACS+LP L +QIH+ I++ E + + + LI++Y KCG A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
++F+ + +++SW +++ Y QN ++A+ LF M G++P ++L++C+
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 537 LVQDGQKVFESMVK 550
+ G +V +K
Sbjct: 365 ALGFGTQVHAYTIK 378
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/628 (32%), Positives = 342/628 (54%), Gaps = 11/628 (1%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
+L C E L +G+ H L+ K+ D F L NMYAKC + V +MP D
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
+ S N ++AGY++N + A + +++P+ T ++L +L I GK++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
M+ + S +S AL+ MY KCG +E A +F+G+++RNV+SW ++I+ + Q+ + ++
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
+ + M ++G+ P + + AL +CA L + G H ++ G+ V +++
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
MY E+ A ++ +S + VSWNA I GF +N + +A+ FSQM D F
Sbjct: 381 MYCKCKEVDTAASMFGKL-QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTF 439
Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
TY S++ A + L + IH +++S + NV V ++L++ Y KCG+ A +F +
Sbjct: 440 TYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMM 499
Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
+ V +WN+MI Y +G + A+ LFE+M I+P TFL+V+SACSHSGLV+ G
Sbjct: 500 SERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGL 559
Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRC 602
K F M + Y I HY MVDLLGRAG+L A FI +P+KP ++ + AC+
Sbjct: 560 KCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQI 619
Query: 603 HSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS 662
H ++ AE ++++ EL+PDD +V L+N+Y A + + R M + + K PGCS
Sbjct: 620 HKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Query: 663 WIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------DNEKEDRVL 712
+E+ N+++ FFS + +H + K+Y L++L+ I++ G+ ++ KE +
Sbjct: 680 MVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLS 739
Query: 713 YHSERLAVGFGLISLPAKNKFECSRTLE 740
HSE+LA+ FGL++ A + L
Sbjct: 740 THSEKLAISFGLLNTTAGTTIHVRKNLR 767
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 231/480 (48%), Gaps = 13/480 (2%)
Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
N +P Y + L +L CS + L R+ L+ K + + F LV++
Sbjct: 29 NYIPANVYEHPAAL-------LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSL 78
Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
+ + G + V + + + +L G+AK + D+A FF+++ DV+P Y +
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNF 138
Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
+ +L +CG + + GK++H +K + L MY KC + +A VF+ + +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE 198
Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
R+++SW I+ G+ Q+G L +V M E+ + P+ T L + ++LR +G
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
H ++ G + TA+VDMY+ G + E +QL + + VSWN+ I + +N+
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSL-ETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
+EA+ F +M+ + + L AC+ L L IH V+ + NV V +S
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
LI Y KC + A +F +L + +VSWN+MI ++QNGR A+ F +M ++P
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA-LIF 580
T+++V++A + + K +V + + +VD+ + G + IA LIF
Sbjct: 438 TFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 204/455 (44%), Gaps = 37/455 (8%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
++ VL S + +G+ H ++ ++ +LV+MYAKCG +++ + M
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
++ S N ++ Y +N +A F K+ V+P + L C L ++ G+
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
+H +++L +V N+L++MY KC ++ A S+F L R ++SW A+I GF Q+G
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
L MR + P+ +T+ + + A L +H H V++ + FV TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
+VDMY+ G I A + + +M +WNA I G+ + + A+E F +M +
Sbjct: 479 LVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
+ T+ S++ ACS S L+EA KC + + +
Sbjct: 538 NGVTFLSVISACS--------------------------HSGLVEAGLKC--FYMMKENY 569
Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
S + D + +M+ + GR +A +M V +P + + A+L AC V
Sbjct: 570 SIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQMPV---KPAVNVYGAMLGACQIHKNVN 624
Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
+K E + + + P++ Y ++ + RA +
Sbjct: 625 FAEKAAERL---FELNPDDGGYHVLLANIYRAASM 656
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/532 (37%), Positives = 314/532 (59%), Gaps = 17/532 (3%)
Query: 220 TYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGL 279
TYS ++ C S A+ EG + + + N L+ MY+K ++ DA +F+ +
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 280 VQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
QRNVISWT +I+ + + ++K L L+ LM D + PN YT++ L SC + + M
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180
Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
H +IK G+ FV +A++D+++ LGE +A EM + ++ WN+ I GF +N
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQN 238
Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVG 459
+++ A+E F +M R ++ T +S+L+AC+ L L Q H IVK ++ ++ +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296
Query: 460 SSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIR 519
++L++ Y KCGS EDA RVF+Q+ DV++W++MI +QNG +++A+ LFE+M G +
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 520 PTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALI 579
P T + VL ACSH+GL++DG F SM K YGI P HY CM+DLLG+AGKL+ A+
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 580 FISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGL 639
++ + +P A WR L ACR ++ +AE+ +K+++ LDP+DA Y LSN+YA +
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 640 QADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
EE R M+ + I KEPGCSWIEV +I+ F + SH ++ +V +KL QL+ ++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 700 IGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
IG+ + ED + +HSE+LA+ FGL++LP + + L
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLR 588
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 193/411 (46%), Gaps = 18/411 (4%)
Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
F+ L+NMY K + + QMP ++ S +++ Y+K + +A + +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDA 272
+V+PN YTYS++L C +S + + LH +K S V +AL+ ++ K G EDA
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 273 ESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
SVF+ +V + I W +II GF Q+ + L L M+ G + T T L +C L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 333 RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQ 392
+G H ++K L + A+VDMY G + +A + +M K ++W+
Sbjct: 274 ALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQM-KERDVITWSTM 330
Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF 452
I+G +N ++EA++ F +M + + T +L ACS L + R +K +
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS-HAGLLEDGWYYFRSMKKLY 389
Query: 453 ESNV---HVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAII 508
+ H G +I+ K G +DA ++ +++ D V+W +++ A R ++ ++
Sbjct: 390 GIDPVREHYG-CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA----CRVQRNMV 444
Query: 509 LFEKMV--VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
L E V + P ++ +LS + D + + +++ GI E
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 145/281 (51%), Gaps = 9/281 (3%)
Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
D + ++ + ++ G+ + T++ + C S R H G + + G F+
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
+++MY + +A + +M + + +SW I+ + + + ++A+E M+R++
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR-NVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
+ +TYSS+L++C+ ++ +H I+K ES+V V S+LI+ + K G EDA V
Sbjct: 160 PNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
F ++ D + WNS+I ++QN R+ A+ LF++M G +T +VL AC+ L+
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 539 QDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLEIAL 578
+ G + +VK + ++ A +VD+ + G LE AL
Sbjct: 277 ELGMQAHVHIVKYDQDLILNNA----LVDMYCKCGSLEDAL 313
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 134/273 (49%), Gaps = 16/273 (5%)
Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
R H I K + D FV ++L++++AK G+ + ++V +M D N ++ G+A+N
Sbjct: 179 RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
+ D A F ++ T +++L C L+ ++ G Q H +K Y ++
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILN 296
Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGID 316
NAL+ MY KCG +EDA VF + +R+VI+W+ +I+G Q+G ++ L+L M+ G
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 317 PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM-------ALGDFVGTAIVDMYSGLGE 369
PN T L +C SH G + R M + + G ++D+ G+
Sbjct: 357 PNYITIVGVLFAC-----SHAGLLEDGWYYFRSMKKLYGIDPVREHYG-CMIDLLGKAGK 410
Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
+ +A K L EM +V+W + G R Q+
Sbjct: 411 LDDAVKLLNEMECEPDAVTWRT-LLGACRVQRN 442
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 313/543 (57%), Gaps = 13/543 (2%)
Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
L+G + + Y+T+L C + +G+ +HA ++ + + N LL MY KCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 269 MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALAS 328
+E+A VFE + QR+ ++WT +I+G+ QH L M G PNE+T + + +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 329 CASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
A+ R G+ H +K G VG+A++D+Y+ G + +A+ + +S + VS
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL-ESRNDVS 229
Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
WNA IAG R TE+A+E F M+R+ F+Y+S+ ACS L + +H+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAII 508
KS + G++L++ Y K GS DA ++F +L DVVSWNS++ AY+Q+G ++A+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLL 568
FE+M GIRP +FL+VL+ACSHSGL+ +G +E M K+ GI+PE HY +VDLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408
Query: 569 GRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYV 628
GRAG L AL FI +PI+PTA IW+ L ACR H + ++ + ++ + ELDPDD +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 629 TLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYE 688
L N+YA G DA RK MK + KEP CSW+E+ N I+ F + ++ H + ++
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 689 KLKQLMQQIEDIG----------HTD-NEKEDRVLYHSERLAVGFGLISLPAKNKFECSR 737
K ++++ +I+++G H D E+E + YHSE++A+ F L++ P + +
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 738 TLE 740
+
Sbjct: 589 NIR 591
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 247/560 (44%), Gaps = 54/560 (9%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D++F +L C+ + L GR HA I ++ D + +L+NMYAKCG ++ V
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
++MP D + L++GY+++ A FF ++ PN +T S+++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
G QLH +K + S V +ALL +Y + G+M+DA+ VF+ L RN +SW A+I G
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
+ EK L L M DG P+ +++ +C+S G HA +IK G L F
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
G ++DMY+ G I +A+K + K VSWN+ + + ++ +EA+ F +M R
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKR-DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
+E ++ S+L ACS L + + K ++++ + G A
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 476 ERVFSQLTAADVVS-WNSMIKA----------------------------------YSQN 500
R ++ + W +++ A Y+
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 501 GRARKAIILFEKMVVEGIRP---------TNSTFLAVLSACSHSGLVQDGQKVFESM--V 549
GR A + +KM G++ N+ + V + H + +K E + +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLE-----IALIF-ISNLPIKPTAPIWRPLFAACRCH 603
KE G +P+ +H VD R L+ IAL F + N P T I + + CH
Sbjct: 538 KELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCH 597
Query: 604 SDLKMA-EFISKQILELDPD 622
+ +K+A + + ++I+ D +
Sbjct: 598 TAIKLASKVVGREIIVRDTN 617
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/637 (33%), Positives = 348/637 (54%), Gaps = 14/637 (2%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D+ I +L+ + + L LG++ H + K + V+ SL+NMY K V
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL-SAI 234
M D+ S N ++AG A+N L +A F++L ++P+ YT +++L SL +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
KQ+H +K+ +S + VS AL+ Y + M++AE +FE ++++W A++ G+
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGY 492
Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
Q D K L+L LM + G +++T +C L + G HA IK G L
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
+V + I+DMY G++ A+ + V+W I+G N + E A FSQM
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWED 474
DEFT +++ KA S L +L QIH+ +K ++ VG+SL++ Y KCGS +D
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 475 AERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
A +F ++ ++ +WN+M+ +Q+G ++ + LF++M GI+P TF+ VLSACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
SGLV + K SM +YGI PE HYSC+ D LGRAG ++ A I ++ ++ +A ++R
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 595 PLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE 654
L AACR D + + ++ ++LEL+P D++ YV LSNMYA A + + R +MK +
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 655 ISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT----------- 703
+ K+PG SWIEV NKI+ F ++S+ + +Y K+K +++ I+ G+
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 704 DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
+ EKE + YHSE+LAV FGL+S P + L
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 220/464 (47%), Gaps = 8/464 (1%)
Query: 190 LAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
L+ Y + + F + DV+ + T+ MLA + ++ G+Q+H +KL
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
VSN+L+ MY K A +VF+ + +R++ISW ++I G Q+G + + L
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 310 MREDGIDPNEYTFTVALASCASLRNS-HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLG 368
+ G+ P++YT T L + +SL + H IK FV TA++D YS
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSIL 428
+ EA+ + + V+WNA +AG+ ++ + ++ F+ M + D+FT +++
Sbjct: 467 CMKEAEILFER--HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 429 KACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV 488
K C L ++ +Q+H+ +KS ++ ++ V S +++ Y KCG A+ F + D V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
+W +MI +NG +A +F +M + G+ P T + A S ++ G+++ +
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
+K + + +VD+ + G ++ A + + W + H + K
Sbjct: 645 LK-LNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITA-WNAMLVGLAQHGEGKE 702
Query: 609 AEFISKQI--LELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLM 650
+ KQ+ L + P D ++ + + + +GL ++A + + M
Sbjct: 703 TLQLFKQMKSLGIKP-DKVTFIGVLSACSHSGLVSEAYKHMRSM 745
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/592 (23%), Positives = 251/592 (42%), Gaps = 82/592 (13%)
Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
+H K + GD+FV +LVN+Y K G +K + ++MPY D+ N +L Y +
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
++A + PN T + I G S D G+ + A N
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS--DAGQ-----------VKSFANGN- 272
Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
DA SV E + + +S + G Y L+ M E ++ +
Sbjct: 273 ------------DASSVSEIIFRNKGLS------EYLHSGQYSALLKCFADMVESDVECD 314
Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
+ TF + LA+ + + +G H +K G+ L V ++++MY L + A+
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP-SL 437
M + +SWN+ IAG +N EA+ F Q++R D++T +S+LKA S LP L
Sbjct: 375 NMSER-DLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
+ +Q+H +K S+ V ++LI+AY++ ++AE +F + D+V+WN+M+ Y
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGY 492
Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
+Q+ K + LF M +G R + T V C + G++V +K G +
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLD 551
Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC----------------- 600
S ++D+ + G + A ++P+ P W + + C
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 601 ------------------RCHSDLKMAEFISKQILELD-PDDAAVYVTLSNMYAEAGLQA 641
C + L+ I L+L+ +D V +L +MYA+ G
Sbjct: 611 LMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSID 670
Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL 693
DA K ++M I+ +N + +Q+ E ++++++K L
Sbjct: 671 DAYCLFKRIEMMNIT---------AWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 187/410 (45%), Gaps = 46/410 (11%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
L LG+ HA I ++F+ +L++MY+KCG + V +MP D+ S N +LA
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 193 YAKNAL-----FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKL 247
YA+++ QAF F L V + T S ML +C + + H K+
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 248 QYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
V+ AL+ +Y+K G +++ + +FE + R+V+ W ++ + + G E+ + L
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 308 CLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGL 367
G++PNE T + LA + GD V ++
Sbjct: 235 SAFHSSGLNPNEITLRL-LARIS----------------------GDDSDAGQVKSFAN- 270
Query: 368 GEIWEAKKQLKEMGKSASSVS----WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFT 423
G ASSVS N ++ + + + ++ F+ MV +D CD+ T
Sbjct: 271 -------------GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVT 317
Query: 424 YSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
+ +L + SLA +Q+H +K + + V +SLI Y K + A VF ++
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
D++SWNS+I +QNG +A+ LF +++ G++P T +VL A S
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRA 503
H+RI+ + + ++LI Y+KCGS A RVF ++ D+VSWNS++ AY+Q+
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 504 -----RKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
++A +LF + + + + T +L C HSG V + F + G+ +E
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGLDGDE 180
Query: 559 AHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
+V++ + GK++ + +P + +W + A
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVV-LWNLMLKA 220
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/674 (31%), Positives = 353/674 (52%), Gaps = 75/674 (11%)
Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRY-HALITKTAVCGDQFVTASLVNMYAKCGDIK 169
L S D ++L C + + + RY HA + K+ + F+ L++ Y+KCG ++
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 170 SMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID---------------- 213
V +MP +I + N ++ G K D+A S F + D
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 214 ---------------VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
N Y+++++L+ C L+ +++G Q+H+ K +LS + +A
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSA 192
Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
L+ MY KCG + DA+ VF+ + RNV+SW ++I F+Q+G + L + +M E ++P+
Sbjct: 193 LVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD 252
Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV-GTAIVDMYSGLGEIWEAKKQL 377
E T +++CASL +G H +V+K D + A VDMY+ I EA+
Sbjct: 253 EVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 378 KEM---------------GKSASS---------------VSWNAQIAGFFRNQKTEEAIE 407
M +AS+ VSWNA IAG+ +N + EEA+
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS 372
Query: 408 AFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------ESNVHVGSS 461
F + R +++++ILKAC+ L L Q H ++K F E ++ VG+S
Sbjct: 373 LFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS 432
Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
LI+ Y KCG E+ VF ++ D VSWN+MI ++QNG +A+ LF +M+ G +P
Sbjct: 433 LIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPD 492
Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
+ T + VLSAC H+G V++G+ F SM +++G+ P HY+CMVDLLGRAG LE A I
Sbjct: 493 HITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMI 552
Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
+P++P + IW L AAC+ H ++ + +++++++LE++P ++ YV LSNMYAE G
Sbjct: 553 EEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWE 612
Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE--- 698
D RK M+ + ++K+PGCSWI++ + F ++KSH +++ L L+ ++
Sbjct: 613 DVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQ 672
Query: 699 ---DIGHTDNEKED 709
+IG +E+ D
Sbjct: 673 DHTEIGSLSSEEMD 686
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/676 (31%), Positives = 364/676 (53%), Gaps = 24/676 (3%)
Query: 79 ISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRR 138
+S + + N++F F+ + V V+ YS + L + C L GR
Sbjct: 56 VSLSKHRKLNEAFE--FLQEMDKAGVSVSSYSYQCLFEA---------CRELRSLSHGRL 104
Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
H + + ++ MY +C ++ + +M L+ S +++ YA+ +
Sbjct: 105 LHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGI 164
Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
D+A F + +P Y+T+L + A+D G+Q+HA ++ S T++
Sbjct: 165 LDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETG 224
Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
++ MY+KCG + A+ VF+ + + ++ T ++ G+ Q G L+L + +G++ +
Sbjct: 225 IVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWD 284
Query: 319 EYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLK 378
+ F+V L +CASL ++G HA V K G+ VGT +VD Y A + +
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSL 437
E+ + + VSW+A I+G+ + + EEA++ F + +N + + FTY+SI +ACS+L
Sbjct: 345 EI-REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
Q+H+ +K + + S+LI Y+KCG +DA VF + D+V+W + I +
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
+ G A +A+ LFEKMV G++P + TF+AVL+ACSH+GLV+ G+ ++M+++Y + P
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT 523
Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
HY CM+D+ R+G L+ AL F+ N+P +P A W+ + C H +L++ E +++
Sbjct: 524 IDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELR 583
Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
+LDP+D A YV N+Y AG +A E KLM + + KE CSWI+ KI+RF +
Sbjct: 584 QLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGD 643
Query: 678 KSHSEMPKVYEKLKQLMQQIE-DIGHTD-NEKEDRVLYHSERLAVGFGLISL----PA-- 729
K H + ++YEKLK+ +E D+ + E+ +++L HSERLA+ FGLIS+ PA
Sbjct: 644 KHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPI 703
Query: 730 ---KNKFECSRTLEYA 742
KN C E+A
Sbjct: 704 KVFKNLRACPDCHEFA 719
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 188/392 (47%), Gaps = 3/392 (0%)
Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
N L +K+ ++AF F ++D V + Y+Y + C L ++ G+ LH +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
+ N +L MY +C +EDA+ +F+ + + N +S T +I+ + + G +K + L
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
M G P +T L S + R G HA VI+ G+ + T IV+MY
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
G + AK+ +M V+ + G+ + + +A++ F +V D F +S
Sbjct: 232 CGWLVGAKRVFDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV 290
Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
+LKAC+ L L +QIH+ + K ES V VG+ L++ Y KC S+E A R F ++ +
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQDGQKVF 545
VSW+++I Y Q + +A+ F+ + + NS T+ ++ ACS G +V
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVH 410
Query: 546 ESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
+K ++ + S ++ + + G L+ A
Sbjct: 411 ADAIKR-SLIGSQYGESALITMYSKCGCLDDA 441
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 334/617 (54%), Gaps = 15/617 (2%)
Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
++ HA + + F+ L++ + GDI V +P I N ++ GY++N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVS 256
F A + + V P+ +T+ +L C LS + G+ +HAQ +L + + V
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 257 NALLTMYIKCGMMEDAESVFEGLV--QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
N L+ +Y KC + A +VFEGL +R ++SWTAI++ + Q+G+ + L + MR+
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
+ P+ L + L++ G HA V+K G+ + + ++ MY+ G++ AK
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
+M KS + + WNA I+G+ +N EAI+ F +M+ D D + +S + AC+ +
Sbjct: 278 ILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
SL ++ + +S + +V + S+LI+ + KCGS E A VF + DVV W++MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
Y +GRAR+AI L+ M G+ P + TFL +L AC+HSG+V++G F M ++ I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKI 455
Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
P++ HY+C++DLLGRAG L+ A I +P++P +W L +AC+ H +++ E+ ++
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
Q+ +DP + YV LSN+YA A L E R MK K ++K+ GCSW+EV ++ F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
+KSH ++ +++ + ++++ G D E E+ + HSER+A+ +G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635
Query: 724 LISLPAKNKFECSRTLE 740
LIS P ++ L
Sbjct: 636 LISTPQGTPLRITKNLR 652
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 4/378 (1%)
Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
+L CS L++GR HA + + D FV L+ +YAKC + S V + +P
Sbjct: 124 HLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLP 183
Query: 182 D--IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
+ I S +++ YA+N +A F ++ +DV+P+ ++L L + +G+
Sbjct: 184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
+HA +K+ + + +L TMY KCG + A+ +F+ + N+I W A+I+G+ ++G
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
+ + + M + P+ + T A+++CA + + + V + F+ +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
++DM++ G + E + + + V W+A I G+ + + EAI + M R
Sbjct: 364 LIDMFAKCGSV-EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
++ T+ +L AC+ + +R+ K + +I+ + G + A V
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 480 SQL-TAADVVSWNSMIKA 496
+ V W +++ A
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 143/297 (48%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
++ VL+ + + L+ GR HA + K + + + SL MYAKCG + + + +M
Sbjct: 225 LVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
++ N +++GYAKN +A F ++ DV+P+ + ++ ++ C + ++++ +
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
++ + Y +S+AL+ M+ KCG +E A VF+ + R+V+ W+A+I G+ HG
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGR 404
Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
+ + L M G+ PN+ TF L +C G+ F ++ +
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYAC 464
Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
++D+ G + +A + +K M W A ++ +++ E A Q+ D
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 42/246 (17%)
Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
A +QIH+R++ + + + + LI A + G A +VF L + WN++I+ Y
Sbjct: 35 AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGY 94
Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK------- 550
S+N + A++++ M + + P + TF +L ACS +Q G+ V + +
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 551 --EYGI---------------------LPEEA--HYSCMVDLLGRAGKLEIALIFISNLP 585
+ G+ LPE ++ +V + G+ AL S +
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 586 IKPTAPIWRPLFA---ACRCHSDLKMAEFISKQI----LELDPDDAAVYVTLSNMYAEAG 638
P W L + A C DLK I + LE++PD + ++L+ MYA+ G
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD---LLISLNTMYAKCG 271
Query: 639 LQADAE 644
A A+
Sbjct: 272 QVATAK 277
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/648 (34%), Positives = 357/648 (55%), Gaps = 54/648 (8%)
Query: 130 EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIK-------------------- 169
E L G+ HAL K+ V +++ VN+Y+KCG +
Sbjct: 21 ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVI 80
Query: 170 -------SMVAVVKQM----PYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNH 218
S + + +Q+ P D S N L++GYA A F ++ + + +
Sbjct: 81 VKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDG 140
Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
+T S ++A C +D KQLH ++ + S ++V+NA +T Y K G++ +A SVF G
Sbjct: 141 FTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 279 LVQ-RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHM 337
+ + R+ +SW ++I + QH + K L L M G + +T L + SL +
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYS---GLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
G FH ++IK G VG+ ++D YS G +++++K +E+ S V WN I+
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LSPDLVVWNTMIS 317
Query: 395 GFFRNQK-TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
G+ N++ +EEA+++F QM R D+ ++ + ACS L S + C+QIH +KS
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 454 SN-VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEK 512
SN + V ++LI Y K G+ +DA VF ++ + VS+N MIK Y+Q+G +A++L+++
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437
Query: 513 MVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
M+ GI P TF+AVLSAC+H G V +GQ+ F +M + + I PE HYSCM+DLLGRAG
Sbjct: 438 MLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497
Query: 573 KLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSN 632
KLE A FI +P KP + W L ACR H ++ +AE + +++ + P A YV L+N
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLAN 557
Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
MYA+A + RK M+ K I K+PGCSWIEV K + F +++ SH + +V E L++
Sbjct: 558 MYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEE 617
Query: 693 LMQQIEDIGHTDNEK--------------EDRVLYHSERLAVGFGLIS 726
+M++++ +G+ ++K E R+ +HSE+LAV FGL+S
Sbjct: 618 MMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMS 665
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK------ 374
TF L + R+ G HA +K +A ++ V++YS G + A+
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 375 ------------------------KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
+QL + +VS+N I+G+ ++T A+ F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
+M + D FT S ++ AC + +Q+H V F+S V ++ + Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 471 SWEDAERVFSQLTA-ADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
+A VF + D VSWNSMI AY Q+ KA+ L+++M+ +G + T +VL
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAG 572
+A + + G++ ++K G S ++D + G
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYSKCG 289
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYL 181
V S CS ++ H L K+ + ++ V +L+++Y K G+++ V +MP L
Sbjct: 351 VTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL 410
Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
+ S NC++ GYA++ +A + ++ + PN T+ +L+ C +DEG++ +
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-Y 469
Query: 242 AQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGLVQR-NVISWTAIINGFKQH 297
TMK + + + ++ + + G +E+AE + + + ++W A++ ++H
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/640 (31%), Positives = 352/640 (55%), Gaps = 17/640 (2%)
Query: 117 KQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
+Q ++ +L C+R+ + G + H + K+ + + L++MY KC + V
Sbjct: 6 RQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFD 65
Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
MP ++ S + L++G+ N + S F ++ + PN +T+ST L CG L+A+++
Sbjct: 66 SMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
G Q+H +K+ + V N+L+ MY KCG + +AE VF +V R++ISW A+I GF
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 297 HGDYEKPLRLVCLMREDGID--PNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-- 352
G K L +M+E I P+E+T T L +C+S + G H +++ G
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
+ ++VD+Y G ++ A+K ++ K + +SW++ I G+ + + EA+ F ++
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQI-KEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
++ D F SSI+ + L +Q+ + VK V +S+++ Y KCG
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
++AE+ F+++ DV+SW +I Y ++G +K++ +F +M+ I P +LAVLSAC
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
SHSG++++G+++F +++ +GI P HY+C+VDLLGRAG+L+ A I +PIKP I
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
W+ L + CR H D+++ + + K +L +D + A YV +SN+Y +AG + R+L +
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI-EDIGHT-------- 703
K + KE G SW+E+ +++ F S SH P + E LK+ +++ E++G+
Sbjct: 545 KGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELH 604
Query: 704 ---DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
D KE+ + HSE+LA+G L + K + R +
Sbjct: 605 DIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFK 644
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 346/622 (55%), Gaps = 26/622 (4%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
G + H L K D +V ASL+++Y++ + + + +MP D+ S N +++GY +
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
+ +A + L +D T ++L+ C + G +H+ ++K S+ V
Sbjct: 229 SGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL---MRE 312
SN L+ +Y + G + D + VF+ + R++ISW +II ++ + E+PLR + L MR
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN---EQPLRAISLFQEMRL 341
Query: 313 DGIDPNEYTFTVALASCAS-LRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMYSGLGEI 370
I P+ T ++LAS S L + +++G L D +G A+V MY+ LG +
Sbjct: 342 SRIQPDCLTL-ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLV 400
Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILK 429
A+ + + +SWN I+G+ +N EAIE ++ M + A ++ T+ S+L
Sbjct: 401 DSARAVFNWL-PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
ACS +L ++H R++K+ +V V +SL + Y KCG EDA +F Q+ + V
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519
Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
WN++I + +G KA++LF++M+ EG++P + TF+ +LSACSHSGLV +GQ FE M
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
+YGI P HY CMVD+ GRAG+LE AL FI ++ ++P A IW L +ACR H ++ +
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
+ S+ + E++P+ +V LSNMYA AG +E R + K + K PG S +EV NK
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
+ F++ N++H ++Y +L L +++ IG+ D+EKE ++ HSERL
Sbjct: 700 VEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERL 759
Query: 719 AVGFGLISLPAKNKFECSRTLE 740
A+ F LI+ PAK + L
Sbjct: 760 AIAFALIATPAKTTIRIFKNLR 781
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 264/539 (48%), Gaps = 23/539 (4%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
V + YC+ L+ + HA + + + ++A LVN+Y G++ +
Sbjct: 57 VHTLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 180 YLDIASCNCLLAGYAK---NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
D+ + N +++GY + ++ + FS F+ G+ P++ T+ ++L C + +
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGL--TPDYRTFPSVLKAC---RTVID 168
Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
G ++H +K ++ V+ +L+ +Y + + +A +F+ + R++ SW A+I+G+ Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFV 356
G+ ++ L L +R + T L++C + + G H+ IK G+ FV
Sbjct: 229 SGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284
Query: 357 GTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
++D+Y+ G + + +K M +SWN+ I + N++ AI F +M +
Sbjct: 285 SNKLIDLYAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHS-RIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
D T S+ S L + C + + K F ++ +G++++ Y K G + A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSH 534
VF+ L DV+SWN++I Y+QNG A +AI ++ M EG I T+++VL ACS
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 535 SGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
+G ++ G K+ ++K G+ + + + D+ G+ G+LE AL +P + P W
Sbjct: 464 AGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WN 521
Query: 595 PLFAACRCHSDLKMAEFISKQILE--LDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
L A H + A + K++L+ + PD +VTL + + +GL + + ++M+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT-FVTLLSACSHSGLVDEGQWCFEMMQ 579
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 94/184 (51%), Gaps = 4/184 (2%)
Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
+ VL CS+ L G + H + K + D FV SL +MY KCG ++ +++ Q+P
Sbjct: 455 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 514
Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
++ N L+A + + ++A F ++ V+P+H T+ T+L+ C +DEG Q
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG-QW 573
Query: 241 HAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQH 297
+ M+ Y ++ + ++ MY + G +E A + + +Q + W A+++ + H
Sbjct: 574 CFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 298 GDYE 301
G+ +
Sbjct: 634 GNVD 637
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 208/631 (32%), Positives = 329/631 (52%), Gaps = 45/631 (7%)
Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAF-SFFLKLDG 211
F +L+ Y+K G I M + +++P D + N L+ GY+ + L A ++ +
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMY-------- 263
T TML + S + GKQ+H Q +KL + S V + LL MY
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISD 192
Query: 264 -----------------------IKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
+ CGM+EDA +F G+ +++ +SW A+I G Q+G
Sbjct: 193 AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLA 251
Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
++ + M+ G+ ++Y F L +C L + G HA +I+ +VG+A+
Sbjct: 252 KEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
+DMY + AK M K + VSW A + G+ + + EEA++ F M R+ D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
+T + AC+ + SL Q H + + S V V +SL+ Y KCG +D+ R+F+
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
++ D VSW +M+ AY+Q GRA + I LF+KMV G++P T V+SACS +GLV+
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
GQ+ F+ M EYGI+P HYSCM+DL R+G+LE A+ FI+ +P P A W L +AC
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
Query: 601 RCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPG 660
R +L++ ++ ++ ++ELDP A Y LS++YA G + R+ M+ K + KEPG
Sbjct: 551 RNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPG 610
Query: 661 CSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG--------HTDNEKEDRVL 712
SWI+ K++ F + ++S + ++Y KL++L +I D G H D E+ +V
Sbjct: 611 QSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVK 670
Query: 713 ---YHSERLAVGFGLISLPAKNKFECSRTLE 740
YHSERLA+ FGLI +P+ + L
Sbjct: 671 MLNYHSERLAIAFGLIFVPSGQPIRVGKNLR 701
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 144/284 (50%), Gaps = 7/284 (2%)
Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
+D+ VL C + G++ HA I +T +V ++L++MY KC + V
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
+M ++ S ++ GY + ++A FL + + P+HYT ++ C ++S++
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
+EG Q H + + + VSN+L+T+Y KCG ++D+ +F + R+ +SWTA+++ +
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC--ASLRNSHMGYMFHAQVIKRGM-- 350
Q G + ++L M + G+ P+ T T +++C A L Y F + G+
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRY-FKLMTSEYGIVP 506
Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
++G + + ++D++S G + EA + + M ++ W ++
Sbjct: 507 SIGHY--SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 4/183 (2%)
Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
+ +S C+ LE G ++H + + V+ SLV +Y KCGDI + +M
Sbjct: 376 QAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
D S +++ YA+ + F K+ ++P+ T + +++ C +++G Q +
Sbjct: 436 DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG-QRY 494
Query: 242 AQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIINGFKQHG 298
+ M +Y ++ + ++ ++ + G +E+A G+ + I WT +++ + G
Sbjct: 495 FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Query: 299 DYE 301
+ E
Sbjct: 555 NLE 557
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
+ IH I+++ + ++++ AY S A RVF ++ ++ SWN+++ AYS+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 501 GRARKAIILFEKMV-VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
G + FEK+ +G+ T+ ++ S SGLV K + +M++++
Sbjct: 86 GLISEMESTFEKLPDRDGV-----TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 560 HYSCMVDLLGRAGKLEIALIF---ISNLPIKPTAPIWRPL---FAACRCHSDLKMAEFIS 613
M+ L G + + + L + + PL +A C SD K
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK------ 194
Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEIS 656
K LD + +Y +L G+ DA + + M+ +S
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS 237
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 327/613 (53%), Gaps = 13/613 (2%)
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
H+ I K + FV A+L+N Y+ CG + S V + + DI +++ Y +N F
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
+ + + PN+YT+ T L L A D K +H Q +K Y+ V L
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
L +Y + G M DA VF + + +V+ W+ +I F Q+G + + L MRE + PNE
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
+T + L CA + S +G H V+K G L +V A++D+Y+ ++ A K E
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
+ S + VSWN I G+ + +A F + +RN + E T+SS L AC+ L S+
Sbjct: 409 L-SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
Q+H +K+ V V +SLI+ Y KCG + A+ VF+++ DV SWN++I YS
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
+G R+A+ + + M +P TFL VLS CS++GL+ GQ+ FESM++++GI P
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILEL 619
HY+CMV LLGR+G+L+ A+ I +P +P+ IWR + +A ++ + A +++IL++
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 620 DPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKS 679
+P D A YV +SNMYA A A+ RK MK + KEPG SWIE ++ F
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707
Query: 680 HSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLISLP 728
H +M + L+ L + G+ D EK+ R+ HSERLA+ +GL+ +P
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767
Query: 729 -AKNKFECSRTLE 740
++N+ + L
Sbjct: 768 SSRNRILIMKNLR 780
Score = 202 bits (515), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 239/511 (46%), Gaps = 13/511 (2%)
Query: 100 CSNTVPVTCYSLESL------LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF 153
C +V LES LD +L C ++ + H I K C D F
Sbjct: 26 CGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLF 85
Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID 213
T L+N Y K G K + + +MP + S L GYA + +L
Sbjct: 86 ATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREG 141
Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
+ N + +++ L + SL + LH+ +KL Y S V AL+ Y CG ++ A
Sbjct: 142 HELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSAR 201
Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
+VFEG++ ++++ W I++ + ++G +E L+L+ MR G PN YTF AL + L
Sbjct: 202 TVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLG 261
Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
H Q++K L VG ++ +Y+ LG++ +A K EM K+ V W+ I
Sbjct: 262 AFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMI 320
Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
A F +N EA++ F +M +EFT SSIL C++ EQ+H +VK F+
Sbjct: 321 ARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
+++V ++LI+ Y KC + A ++F++L++ + VSWN++I Y G KA +F +
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREA 440
Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGK 573
+ + T TF + L AC+ + G +V +K + A + ++D+ + G
Sbjct: 441 LRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNA-KKVAVSNSLIDMYAKCGD 499
Query: 574 LEIALIFISNLPIKPTAPIWRPLFAACRCHS 604
++ A + + A W L + H
Sbjct: 500 IKFAQSVFNEMETIDVAS-WNALISGYSTHG 529
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 1/300 (0%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
+ + H I KT D V L+ +Y + GD+ V +MP D+ + ++A
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
+ +N ++A F+++ V PN +T S++L C G+QLH +K+ +
Sbjct: 323 FCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLD 382
Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
VSNAL+ +Y KC M+ A +F L +N +SW +I G++ G+ K +
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
+ + E TF+ AL +CASL + +G H IK A V +++DMY+ G+I
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
A+ EM ++ SWNA I+G+ + +A+ M D + T+ +L CS
Sbjct: 503 AQSVFNEM-ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 166/347 (47%), Gaps = 10/347 (2%)
Query: 87 RNDSFPDGF-IDDGCSNTVPVTCYSLESLLDKQFVI-------EVLSYCSREECLELGRR 138
+ND P F I C N L + + FV+ +L+ C+ +C LG +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 139 YHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNAL 198
H L+ K D +V+ +L+++YAKC + + V + ++ + S N ++ GY
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 199 FDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNA 258
+AFS F + V T+S+ L C SL+++D G Q+H +K K AVSN+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 259 LLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPN 318
L+ MY KCG ++ A+SVF + +V SW A+I+G+ HG + LR++ +M++ PN
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 319 EYTFTVALASCASLRNSHMGY-MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
TF L+ C++ G F + + G+ T +V + G++ +A K +
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
+ + S + W A ++ NQ EE ++ + DE TY
Sbjct: 610 EGIPYEPSVMIWRAMLSASM-NQNNEEFARRSAEEILKINPKDEATY 655
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 362 bits (928), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 351/626 (56%), Gaps = 25/626 (3%)
Query: 123 VLSYCSREECLELGRRYHALITKTA-VCGDQFVTASLVNMYAKC-GDIKSMVAVVKQMPY 180
V+ CS + + +GR + KT D V SL++M+ K ++ V +M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
L++ + ++ + +A FFL + + + +T S++ + C L + GKQL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKC---GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
H+ ++ + S L+ MY KC G ++D VF+ + +V+SWTA+I G+ ++
Sbjct: 292 HSWAIRSGLVDDVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 298 GDY-EKPLRLVCLMREDG-IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
+ + + L M G ++PN +TF+ A +C +L + +G Q KRG+A
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
V +++ M+ + +A++ + + + + VS+N + G RN E+A + S++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEK-NLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
+ FT++S+L + + S+ EQIHS++VK N V ++LI Y+KCGS + A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
RVF+ + +V+SW SMI ++++G A + + F +M+ EG++P T++A+LSACSH
Sbjct: 529 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
GLV +G + F SM +++ I P+ HY+CMVDLL RAG L A FI+ +P + +WR
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
ACR HS+ ++ + +++ILELDP++ A Y+ LSN+YA AG ++ E R+ MK + +
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK-------- 707
KE GCSWIEV +KI++F+ + +H ++Y++L +L+ +I+ G+ +
Sbjct: 709 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEE 768
Query: 708 ------EDRVLY-HSERLAVGFGLIS 726
++R+LY HSE++AV FGLIS
Sbjct: 769 ENDEAEKERLLYQHSEKIAVAFGLIS 794
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 225/465 (48%), Gaps = 14/465 (3%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD---IKSMVAVVKQMP 179
+L C R LG+ HA + + + D + SL+++Y+K GD + + +++
Sbjct: 68 LLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG 127
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
D+ S + ++A Y N A F++ + + PN Y Y+ ++ C + + G+
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 240 LHAQTMKLQYL-SKTAVSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
MK + S V +L+ M++K E+A VF+ + + NV++WT +I Q
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG 357
G + +R M G + +++T + ++CA L N +G H+ I+ G+ D V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVE 305
Query: 358 TAIVDMY---SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN-QKTEEAIEAFSQMV 413
++VDMY S G + + +K M + S +SW A I G+ +N EAI FS+M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLATEAINLFSEMI 364
Query: 414 -RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
+ + FT+SS KAC L +Q+ + K SN V +S+I + K
Sbjct: 365 TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRM 424
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
EDA+R F L+ ++VS+N+ + +N +A L ++ + + TF ++LS
Sbjct: 425 EDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV 484
Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIA 577
++ G ++ G+++ +VK G+ + + ++ + + G ++ A
Sbjct: 485 ANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTA 528
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 193/379 (50%), Gaps = 17/379 (4%)
Query: 210 DGIDVQP-NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGM 268
DGI +P + T+S++L C GK +HA+ ++ + + N+L+++Y K G
Sbjct: 55 DGI--RPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGD 112
Query: 269 MEDAESVFEGLVQ---RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
AE VFE + + R+V+SW+A++ + +G +++ E G+ PN+Y +T
Sbjct: 113 SAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDF-VGTAIVDMY-SGLGEIWEAKKQLKEMGKS 383
+ +C++ +G + ++K G D VG +++DM+ G A K +M +
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE- 231
Query: 384 ASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQI 443
+ V+W I + EAI F MV + D+FT SS+ AC+ L +L+ +Q+
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKC---GSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
HS ++S +V SL++ Y KC GS +D +VF ++ V+SW ++I Y +N
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 501 -GRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
A +AI LF +M+ +G + P + TF + AC + + G++V K G+
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNS 408
Query: 559 AHYSCMVDLLGRAGKLEIA 577
+ + ++ + ++ ++E A
Sbjct: 409 SVANSVISMFVKSDRMEDA 427
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 405 AIEAFSQMVRNDA-ACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
A+ A M R+ D T+SS+LK+C + +H+R+++ E + + +SLI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 464 EAYNKCGSWEDAERVFS---QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP 520
Y+K G AE VF + DVVSW++M+ Y NGR AI +F + + G+ P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
+ + AV+ ACS+S V G+ ++K
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMK 194
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 362 bits (928), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 347/619 (56%), Gaps = 31/619 (5%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
VL C+ L LG + HA K+ D V + ++MYAKC +++ + L+
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
S N ++ GY++ +A F +L + + + S + C + + EG Q++
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 406
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
+K V+NA + MY KC + +A VF+ + +R+ +SW AII +Q+G +
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYE 466
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY--MFHAQVIKRGMALGDFVGTAI 360
L L M I+P+E+TF L +C +GY H+ ++K GMA VG ++
Sbjct: 467 TLFLFVSMLRSRIEPDEFTFGSILKACT---GGSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 361 VDMYSGLGEIWEAKK-------------QLKEMGKSASS------VSWNAQIAGFFRNQK 401
+DMYS G I EA+K ++E+ K + VSWN+ I+G+ ++
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
+E+A F++M+ D+FTY+++L C+ L S +QIH++++K + +S+V++ S+
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICST 643
Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
L++ Y+KCG D+ +F + D V+WN+MI Y+ +G+ +AI LFE+M++E I+P
Sbjct: 644 LVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPN 703
Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFI 581
+ TF+++L AC+H GL+ G + F M ++YG+ P+ HYS MVD+LG++GK++ AL I
Sbjct: 704 HVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELI 763
Query: 582 SNLPIKPTAPIWRPLFAACRCH-SDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
+P + IWR L C H +++++AE + +L LDP D++ Y LSN+YA+AG+
Sbjct: 764 REMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMW 823
Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL---MQQI 697
+ R+ M+ ++ KEPGCSW+E+ ++++ F +K+H ++YE+L + M+
Sbjct: 824 EKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF 883
Query: 698 ED---IGHTDNEKEDRVLY 713
+D + + E+ED+ Y
Sbjct: 884 DDSSFVRGVEVEEEDQWCY 902
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 182/651 (27%), Positives = 295/651 (45%), Gaps = 66/651 (10%)
Query: 47 SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF-PDGFID-----DGC 100
SA +F+K P R +S + +I NGYS ND F + F + D
Sbjct: 101 SASMVFDKMPLRDVVSWNKMI--------------NGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 101 SNTVPVTCY--------SLESLLD----------KQFVIEVLSYCSREECLELGRRYHAL 142
S ++ Y S+E +D + F I +L CS E LG + H +
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI-ILKVCSFLEDTSLGMQIHGI 205
Query: 143 ITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQA 202
+ + D ++L++MYAK + V + +P + S + ++AG +N L A
Sbjct: 206 VVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 203 FSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTM 262
FF ++ ++ + Y+++L C +LS + G QLHA +K + + V A L M
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 263 YIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTF 322
Y KC M+DA+ +F+ N S+ A+I G+ Q K L L + G+ +E +
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
+ +CA ++ G + IK ++L V A +DMY + EA + EM +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM-R 444
Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
+VSWNA IA +N K E + F M+R+ DEFT+ SILKAC+ SL +
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGME 503
Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ-LTAADV-------------- 487
IHS IVKS SN VG SLI+ Y+KCG E+AE++ S+ A+V
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 488 -----VSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
VSWNS+I Y ++ A +LF +M+ GI P T+ VL C++ G+
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 543 KVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
++ ++K+ L + + S +VD+ + G L + + ++ W +
Sbjct: 624 QIHAQVIKKE--LQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYA 680
Query: 602 CHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
H + A + + ILE + ++++ A GL E +MK
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMK 731
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 237/486 (48%), Gaps = 34/486 (6%)
Query: 123 VLSYCSREECLELGRRYHA---------------LITKTAVCGDQFVTASLV-------- 159
V C+++ LELG++ HA + + FV+AS+V
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 160 --------NMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDG 211
N Y+K D+ + MP D+ S N +L+GY +N ++ F+ +
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
++ + T++ +L +C L G Q+H +++ + ++ALL MY K +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
+ VF+G+ ++N +SW+AII G Q+ L+ M++ ++ + L SCA+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 332 LRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNA 391
L +G HA +K A V TA +DMY+ + +A+ L + ++ + S+NA
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI-LFDNSENLNRQSYNA 352
Query: 392 QIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
I G+ + + +A+ F +++ + DE + S + +AC+L+ L+ QI+ +KS
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
+V V ++ I+ Y KC + +A RVF ++ D VSWN++I A+ QNG+ + + LF
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
M+ I P TF ++L AC+ G + G ++ S+VK G+ + ++D+ +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKC 530
Query: 572 GKLEIA 577
G +E A
Sbjct: 531 GMIEEA 536
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 226/514 (43%), Gaps = 38/514 (7%)
Query: 202 AFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
+FS+F + +S + C A++ GKQ HA + + T V N LL
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK-------------------------- 295
+Y A VF+ + R+V+SW +ING+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 296 -----QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
Q+G+ K + + M +GI+ + TF + L C+ L ++ +G H V++ G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
+A++DMY+ E+ + + + + +SVSW+A IAG +N A++ F
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEK-NSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 411 QMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
+M + +A + Y+S+L++C+ L L Q+H+ +KS F ++ V ++ ++ Y KC
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD 330
Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
+ +DA+ +F + S+N+MI YSQ KA++LF +++ G+ + V
Sbjct: 331 NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR 390
Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
AC+ + +G +++ +K + + + +D+ G+ L A + + A
Sbjct: 391 ACALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDA 448
Query: 591 PIWRPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRK 648
W + AA + F+ +L ++PD+ + ++ L E
Sbjct: 449 VSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE-FTFGSILKACTGGSLGYGMEIHSS 507
Query: 649 LMKMKEISKEP-GCSWIEVYNKIYRFFSQNKSHS 681
++K S GCS I++Y+K K HS
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 345/622 (55%), Gaps = 10/622 (1%)
Query: 87 RNDSFPD----GFIDDGCSNTVPVTCYSLESL---LDKQFVIEVLSYCSREECLELGRRY 139
+ND F + G+ +G S+ V ++S +D +LS C+ LE+G ++
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
H++I K + + FV +LV+MYAKCG ++ + ++M D + N ++ Y ++
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
+AF F +++ + + ++ L C + + +GKQ+H ++K ++L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
+ MY KCG+++DA VF L + +V+S A+I G+ Q+ + E+ + L M G++P+E
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSE 629
Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSGLGEIWEAKKQLK 378
TF + +C + +G FH Q+ KRG + G+++G +++ MY + EA
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 379 EMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLA 438
E+ S V W ++G +N EEA++ + +M + D+ T+ ++L+ CS+L SL
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 439 TCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSWNSMIKAY 497
IHS I + + ++LI+ Y KCG + + +VF ++ ++VVSWNS+I Y
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
++NG A A+ +F+ M I P TFL VL+ACSH+G V DG+K+FE M+ +YGI
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
H +CMVDLLGR G L+ A FI +KP A +W L ACR H D E +++++
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
EL+P +++ YV LSN+YA G A RK+M+ + + K PG SWI+V + + F + +
Sbjct: 930 ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989
Query: 678 KSHSEMPKVYEKLKQLMQQIED 699
KSHSE+ K+ L+ L ++D
Sbjct: 990 KSHSEIGKIEMFLEDLYDLMKD 1011
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 284/582 (48%), Gaps = 54/582 (9%)
Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
D +++N Y + G +K + +M D+ + N +++G+ K A +F +
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
V+ T ++L+ G ++ +D G +HA+ +KL S V ++L++MY KC ME
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
A VFE L ++N + W A+I G+ +G+ K + L M+ G + +++TFT L++CA
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
+ + MG FH+ +IK+ +A FVG A+VDMY+ G + +A++ + M +V+WN
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWN 498
Query: 391 AQIAGFFRNQKTEEAIEAFSQM----VRNDAACDEFTYSSILKACSLLPSLATCEQIHSR 446
I + +++ EA + F +M + +D AC +S LKAC+ + L +Q+H
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGAC----LASTLKACTHVHGLYQGKQVHCL 554
Query: 447 IVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
VK + ++H GSSLI+ Y+KCG +DA +VFS L VVS N++I YSQN +A
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEA 613
Query: 507 IILFEKMVVEGIRPTNSTFLAVLSAC----------------SHSGLVQDGQKVFESMVK 550
++LF++M+ G+ P+ TF ++ AC + G +G+ + S++
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 551 EY----GILPEEAHYS------------CMVDLLGRAGKLEIALIFISNL---PIKPTAP 591
Y G+ A +S M+ + G E AL F + + P
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPD-DAAVYVTLSNMYAEAGLQADAEEQRKLM 650
+ + C S L+ I I L D D TL +MYA+ G + + M
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 651 KMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
+ + S + +N + +++N + K+++ ++Q
Sbjct: 794 RRR--------SNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 228/466 (48%), Gaps = 5/466 (1%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
L+LG HA K + + +V +SLV+MY+KC +++ V + + + N ++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
YA N + F+ + + +T++++L+ C + ++ G Q H+ +K +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
V NAL+ MY KCG +EDA +FE + R+ ++W II + Q + + L M
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
GI + L +C + + G H +K G+ G++++DMYS G I +
Sbjct: 523 CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
A+K + S VS NA IAG+ +N EEA+ F +M+ E T+++I++AC
Sbjct: 583 ARKVFSSL-PEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 433 LLPSLATCEQIHSRIVKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTA-ADVVSW 490
SL Q H +I K F S ++G SL+ Y +A +FS+L++ +V W
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
M+ +SQNG +A+ +++M +G+ P +TF+ VL CS +++G+ + S++
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-HSLIF 759
Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPL 596
+E + ++D+ + G ++ + + + W L
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 208/447 (46%), Gaps = 42/447 (9%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLL 190
L +G+ H+ + + + ++V++YAKC + KQ +L D+ + N +L
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVS---YAEKQFDFLEKDVTAWNSML 132
Query: 191 AGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYL 250
+ Y+ + F+ L + PN +T+S +L+ C + ++ G+Q+H +K+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 251 SKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM 310
+ AL+ MY KC + DA VFE +V N + WT + +G+ + G E+ + + M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 311 REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEI 370
R++G P+ F +++ Y LG++
Sbjct: 253 RDEGHRPDHLAF-----------------------------------VTVINTYIRLGKL 277
Query: 371 WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
+A+ EM S V+WN I+G + AIE F M ++ T S+L A
Sbjct: 278 KDARLLFGEM-SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
++ +L +H+ +K SN++VGSSL+ Y+KC E A +VF L + V W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
N+MI+ Y+ NG + K + LF M G + TF ++LS C+ S ++ G + F S++
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIII 455
Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIA 577
+ + + +VD+ + G LE A
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDA 482
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
A+ GK +H++++ L S+ + NA++ +Y KC + AE F+ ++++V +W ++++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLS 133
Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
+ G K LR + E+ I PN++TF++ L++CA N G H +IK G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
+ G A+VDMY+ I +A++ E ++V W +G+ + EEA+ F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVF-EWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
D + ++ I Y + G
Sbjct: 253 RDEGHRPDHLAFVTV-----------------------------------INTYIRLGKL 277
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
+DA +F ++++ DVV+WN MI + + G AI F M ++ T ST +VLSA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 174/371 (46%), Gaps = 20/371 (5%)
Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
+G H++ + G+ +G AIVD+Y+ ++ A+KQ + K ++ WN+ ++ +
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKDVTA--WNSMLSMY 135
Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
K + + +F + N ++FT+S +L C+ ++ QIH ++K E N
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
+ G +L++ Y KC DA RVF + + V W + Y + G +A+++FE+M E
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
G RP + F+ V++ G ++D + +F M P+ ++ M+ G+ G +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETV 310
Query: 577 ALIFISNL---PIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD-PDDAAVYVTLSN 632
A+ + N+ +K T + +A ++L + + + ++L + V +L +
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 633 MYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQ 692
MY++ E+ K+ E +E + +N + R ++ N ++ +++ +K
Sbjct: 371 MYSK------CEKMEAAAKVFEALEEKNDVF---WNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 693 LMQQIEDIGHT 703
I+D T
Sbjct: 422 SGYNIDDFTFT 432
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 217/713 (30%), Positives = 342/713 (47%), Gaps = 61/713 (8%)
Query: 89 DSFPDGFIDDGCSNTVPVT---CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITK 145
+S + D+GC+N +SL D V C + G HAL
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 146 TAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
T + FV +LV MY++C + V +M D+ S N ++ YAK A
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 206 FLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
F ++ + +P++ T +L C SL GKQLH + + + V N L+ MY
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 265 KCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED----------- 313
KCGMM++A +VF + ++V+SW A++ G+ Q G +E +RL M+E+
Sbjct: 276 KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSA 335
Query: 314 ------------------------GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG 349
GI PNE T L+ CAS+ G H IK
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395
Query: 350 MAL-----GD--FVGTAIVDMYSGLGEIWEAKKQLKEMG-KSASSVSWNAQIAGFFRNQK 401
+ L GD V ++DMY+ ++ A+ + K V+W I G+ ++
Sbjct: 396 IDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455
Query: 402 TEEAIEAFSQMVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES-NVHV 458
+A+E S+M D + FT S L AC+ L +L +QIH+ ++++ + + V
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 459 GSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
+ LI+ Y KCGS DA VF + A + V+W S++ Y +G +A+ +F++M G
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGF 575
Query: 519 RPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
+ T L VL ACSHSG++ G + F M +G+ P HY+C+VDLLGRAG+L AL
Sbjct: 576 KLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAAL 635
Query: 579 IFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAG 638
I +P++P +W + CR H +++ E+ +++I EL + Y LSN+YA AG
Sbjct: 636 RLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAG 695
Query: 639 LQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIE 698
D R LM+ K + K PGCSW+E FF +K+H ++Y+ L MQ+I+
Sbjct: 696 RWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIK 755
Query: 699 DIGHT-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
DIG+ D EK+D + HSE+LA+ +G+++ P ++ L
Sbjct: 756 DIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 808
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 212/483 (43%), Gaps = 50/483 (10%)
Query: 154 VTASLVNMYAKCGDIKSMVAVVKQMPYLD--IASCNCLLAGYAKNALFDQAFSFFLKLDG 211
+T+ L++ Y G + V+++++ P D + N L+ Y N ++ F +
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
+ P++YT+ + CG +S++ G+ HA ++ ++S V NAL+ MY +C + D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCA 330
A VF+ + +V+SW +II + + G + L + M E G P+ T L CA
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
SL +G H + M FVG +VDMY+ G + EA M VSWN
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM-SVKDVVSWN 299
Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYS------------------------- 425
A +AG+ + + E+A+ F +M D T+S
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 426 ----------SILKACSLLPSLATCEQIHSRIVKSKFE--SNVH-----VGSSLIEAYNK 468
S+L C+ + +L ++IH +K + N H V + LI+ Y K
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 469 CGSWEDAERVFSQLTAA--DVVSWNSMIKAYSQNGRARKAIILFEKMVVEG--IRPTNST 524
C + A +F L+ DVV+W MI YSQ+G A KA+ L +M E RP T
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 525 FLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNL 584
L AC+ ++ G+++ ++ +C++D+ + G + A + N+
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Query: 585 PIK 587
K
Sbjct: 540 MAK 542
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 8/329 (2%)
Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRN--VISWTAII 291
I + K +H + + L+ S+ L++ YI G + A S+ + V W ++I
Sbjct: 41 ISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
+ +G K L L LM P+ YTF +C + + G HA + G
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
FVG A+V MYS + +A+K EM VSWN+ I + + K + A+E FS+
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 412 MVRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
M N+ C D T ++L C+ L + + +Q+H V S+ N+ VG+ L++ Y KC
Sbjct: 219 MT-NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
G ++A VFS ++ DVVSWN+M+ YSQ GR A+ LFEKM E I+ T+ A +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEE 558
S + GL + V M+ GI P E
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSS-GIKPNE 365
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/603 (32%), Positives = 324/603 (53%), Gaps = 13/603 (2%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
G + H I K+ V SLV Y K + S V +M D+ S N ++ GY
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
N L ++ S F+++ ++ + T ++ A C I G+ +H+ +K + +
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
N LL MY KCG ++ A++VF + R+V+S+T++I G+ + G + ++L M E+GI
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
P+ YT T L CA R G H + + + FV A++DMY+ G + EA+
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSSILKACSLL 434
EM + +SWN I G+ +N EA+ F+ ++ + DE T + +L AC+ L
Sbjct: 454 VFSEM-RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
+ +IH I+++ + S+ HV +SL++ Y KCG+ A +F + + D+VSW MI
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
Y +G ++AI LF +M GI +F+++L ACSHSGLV +G + F M E I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
P HY+C+VD+L R G L A FI N+PI P A IW L CR H D+K+AE +++
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
++ EL+P++ YV ++N+YAEA + RK + + + K PGCSWIE+ ++ F
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFV 752
Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERLAVGFG 723
+ + S+ E + L+++ ++ + G++ + EKE+ + HSE+LA+ G
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALG 812
Query: 724 LIS 726
+IS
Sbjct: 813 IIS 815
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 272/575 (47%), Gaps = 30/575 (5%)
Query: 102 NTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNM 161
N V + C S + +D + + VL C+ + L+ G+ I D + + L M
Sbjct: 79 NAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM 138
Query: 162 YAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTY 221
Y CGD+K V ++ N L+ AK+ F + F K+ V+ + YT+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
S + SL ++ G+QLH +K + + +V N+L+ Y+K ++ A VF+ + +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 282 RNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMF 341
R+VISW +IING+ +G EK L + M GI+ + T A CA R +G
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 342 HAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQK 401
H+ +K + D ++DMYS G++ AK +EM S VS+ + IAG+ R
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM-SDRSVVSYTSMIAGYAREGL 377
Query: 402 TEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
EA++ F +M + D +T +++L C+ L +++H I ++ ++ V ++
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRP 520
L++ Y KCGS ++AE VFS++ D++SWN++I YS+N A +A+ LF ++ E P
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 521 TNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIF 580
T VL AC+ G+++ +++ G + + +VD+ + G L +A +
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 581 ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQ 640
++ K W + A H K A + L N +AG++
Sbjct: 557 FDDIASKDLVS-WTVMIAGYGMHGFGKEA------------------IALFNQMRQAGIE 597
Query: 641 ADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFS 675
AD ++ +S CS + ++ +RFF+
Sbjct: 598 AD--------EISFVSLLYACSHSGLVDEGWRFFN 624
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 323/578 (55%), Gaps = 3/578 (0%)
Query: 124 LSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
L CS+ E GR+ H + K + D +V SL++MY+KCG + V + +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
N ++A YA+N A F + V P+ +T S +++ C L + GK +HA+
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
K S + + +ALLT+Y KCG DA VF+ + ++++++W ++I+G ++G +++
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 304 LRLVCLMRED--GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
L++ M++D + P+ T +CA L G H +IK G+ L FVG++++
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
D+YS G A K M + + V+WN+ I+ + RN E +I+ F+ M+ D
Sbjct: 519 DLYSKCGLPEMALKVFTSM-STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDS 577
Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
+ +S+L A S SL + +H ++ S+ H+ ++LI+ Y KCG + AE +F +
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG 541
+ +++WN MI Y +G A+ LF++M G P + TFL+++SAC+HSG V++G
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
+ +FE M ++YGI P HY+ MVDLLGRAG LE A FI +PI+ + IW L +A R
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757
Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
H ++++ ++++L ++P+ + YV L N+Y EAGL+ +A + LMK K + K+PGC
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817
Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIED 699
SWIEV ++ FFS S +++ L +L + D
Sbjct: 818 SWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVD 855
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 150/583 (25%), Positives = 274/583 (46%), Gaps = 37/583 (6%)
Query: 13 TSSFTFPY-----PVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLI 67
TS FTFP + + K H V + + + A L N K L + +
Sbjct: 58 TSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQV 117
Query: 68 FNGYMNIEEKGISRNGYSTRNDSFPDGFIDD-----------GCSNTVPVTCYSLESLLD 116
F+G+ S++G S R+ + + ID GC + V ++
Sbjct: 118 FDGWSQ------SQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAF-S 170
Query: 117 KQFVIEVL---SYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG-DIKSMV 172
V+ V+ REE G++ H + + ++ D F+ +L++MY K G I +
Sbjct: 171 LSIVVSVMCKEGNFRREE----GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWR 226
Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLS 232
V+ ++ N ++ G+ + + + + ++ V+ +++ L C
Sbjct: 227 VFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSE 286
Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
G+Q+H +K+ + V +LL+MY KCGM+ +AE+VF +V + + W A++
Sbjct: 287 NSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVA 346
Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
+ ++ L L MR+ + P+ +T + ++ C+ L + G HA++ KR +
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
+ +A++ +YS G +A K M + V+W + I+G +N K +EA++ F M
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 413 VRNDAAC--DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
+D + D +S+ AC+ L +L Q+H ++K+ NV VGSSLI+ Y+KCG
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG 525
Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
E A +VF+ ++ ++V+WNSMI YS+N +I LF M+ +GI P + + +VL
Sbjct: 526 LPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAG 572
A S + + G K GI P + H + ++D+ + G
Sbjct: 586 AISSTASLLKG-KSLHGYTLRLGI-PSDTHLKNALIDMYVKCG 626
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 10/382 (2%)
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID-VQPNHYTYSTMLAICGSLSAIDEGK 238
Y+ AS N + + + QA + K DG + +T+ ++L C +L+ + GK
Sbjct: 21 YISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ-------RNVISWTAII 291
+H + L + ++ +L+ MY+KCG ++ A VF+G Q R+V W ++I
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMI 140
Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN--SHMGYMFHAQVIKRG 349
+G+ + +++ + M G+ P+ ++ ++ ++ N G H +++
Sbjct: 141 DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS 200
Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAF 409
+ F+ TA++DMY G +A + E+ ++ V WN I GF + E +++ +
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 410 SQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
N +++ L ACS + QIH +VK ++ +V +SL+ Y+KC
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
G +AE VFS + + WN+M+ AY++N A+ LF M + + P + T V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 530 SACSHSGLVQDGQKVFESMVKE 551
S CS GL G+ V + K
Sbjct: 381 SCCSVLGLYNYGKSVHAELFKR 402
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 152/311 (48%), Gaps = 23/311 (7%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + V + C+ E L G + H + KT + + FV +SL+++Y+KCG + + V
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF 534
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
M ++ + N +++ Y++N L + + F + + P+ + +++L S +++
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
+GK LH T++L S T + NAL+ MY+KCG + AE++F+ + +++I+W +I G+
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
HGD L L M++ G P++ TF +++C H+ ++ G + +F
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACN-----------HSGFVEEGKNIFEF 703
Query: 356 VG------------TAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTE 403
+ +VD+ G + EA +K M A S W ++ + E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 404 EAIEAFSQMVR 414
I + +++R
Sbjct: 764 LGILSAEKLLR 774
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 195/567 (34%), Positives = 325/567 (57%), Gaps = 6/567 (1%)
Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
LGR H L+ K+ D V +SLV MYAK ++ + V +MP D+AS N +++ +
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
++ ++A F +++ +PN + + ++ C L ++ GK++H + +K +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
V++AL+ MY KC +E A VF+ + ++++++W ++I G+ GD + + ++ M +G
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
P++ T T L +C+ RN G H VI+ + +V +++D+Y GE A+
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
+ K + SWN I+ + +A+E + QMV D T++S+L ACS L
Sbjct: 365 TVFSKTQKDVAE-SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQL 423
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
+L +QIH I +S+ E++ + S+L++ Y+KCG+ ++A R+F+ + DVVSW MI
Sbjct: 424 AALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMI 483
Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
AY +G+ R+A+ F++M G++P T LAVLSAC H+GL+ +G K F M +YGI
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGI 543
Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLP-IKPTAPIWRPLFAACRCHSDLKMAEFIS 613
P HYSCM+D+LGRAG+L A I P A + LF+AC H + + + I+
Sbjct: 544 EPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA 603
Query: 614 KQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKE--ISKEPGCSWIEVYNKIY 671
+ ++E PDDA+ Y+ L N+YA +G DA + +L KMKE + K+PGCSWIE+ +K+
Sbjct: 604 RLLVENYPDDASTYMVLFNLYA-SGESWDAARRVRL-KMKEMGLRKKPGCSWIEMSDKVC 661
Query: 672 RFFSQNKSHSEMPKVYEKLKQLMQQIE 698
FF++++SH VYE L L +E
Sbjct: 662 HFFAEDRSHLRAENVYECLALLSGHME 688
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 254/497 (51%), Gaps = 9/497 (1%)
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL-DIASCNCLLAGYAKNAL 198
H I + D + SL+N+Y C D S V + D+ N L++GY+KN++
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86
Query: 199 FDQAFSFFLKLDGIDV-QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
F F +L + P+ +T+ ++ G+L G+ +H +K Y+ V++
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVAS 146
Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
+L+ MY K + E++ VF+ + +R+V SW +I+ F Q G+ EK L L M G +P
Sbjct: 147 SLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP 206
Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
N + TVA+++C+ L G H + +K+G L ++V +A+VDMY G + E +++
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY-GKCDCLEVAREV 265
Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
+ S V+WN+ I G+ ++ +E ++M+ + T +SIL ACS +L
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVV-SWNSMIKA 496
+ IH +++S ++++V SLI+ Y KCG AE VFS+ T DV SWN MI +
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISS 384
Query: 497 YSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILP 556
Y G KA+ ++++MV G++P TF +VL ACS ++ G+++ S + E +
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLS-ISESRLET 443
Query: 557 EEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA--EFISK 614
+E S ++D+ + G + A +++P K W + +A H + A +F
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQPREALYQFDEM 502
Query: 615 QILELDPDDAAVYVTLS 631
Q L PD + LS
Sbjct: 503 QKFGLKPDGVTLLAVLS 519
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 149/304 (49%), Gaps = 35/304 (11%)
Query: 48 ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPVT 107
A ++F K P+++ ++ + +I GY+ KG S++ N +G T P
Sbjct: 262 AREVFQKMPRKSLVAWNSMI-KGYV---AKGDSKSCVEILNRMIIEG--------TRP-- 307
Query: 108 CYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGD 167
+ + +L CSR L G+ H + ++ V D +V SL+++Y KCG+
Sbjct: 308 --------SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 168 IKSMVAVVKQMPYLDIA-SCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
++ V D+A S N +++ Y + +A + ++ + V+P+ T++++L
Sbjct: 360 -ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVIS 286
C L+A+++GKQ+H + + + + +ALL MY KCG ++A +F + +++V+S
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 287 WTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVI 346
WT +I+ + HG + L M++ G+ P+ T L++C HA +I
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACG-----------HAGLI 527
Query: 347 KRGM 350
G+
Sbjct: 528 DEGL 531
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 225/738 (30%), Positives = 379/738 (51%), Gaps = 41/738 (5%)
Query: 13 TSSFTFPYPVVEQVKPKKCNHRKTVEVKEPFASYSACQLFNKSPKRAGLSTSDLIFNGYM 72
T++ + P V ++ C +K+ + + F F KS LS + +FN
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS---GSLSYARKVFN--- 267
Query: 73 NIEEK-GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLD---KQFVIEVLSY-- 126
+E + ++ NG G + + S++D + +VI + S+
Sbjct: 268 QMETRNAVTLNGLMV-------GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE 320
Query: 127 --CSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVAVVKQMPYLDI 183
+ E L+ GR H + T + + LVNMYAKCG I V M D
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 184 ASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQ 243
S N ++ G +N F +A + + D+ P +T + L+ C SL G+Q+H +
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 244 TMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKP 303
++KL +VSNAL+T+Y + G + + +F + + + +SW +II + + P
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR-SERSLP 499
Query: 304 LRLVCLM--REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
+VC + + G N TF+ L++ +SL +G H +K +A A++
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
Y GE+ +K M + +V+WN+ I+G+ N+ +A++ M++ D
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
F Y+++L A + + +L ++H+ V++ ES+V VGS+L++ Y+KCG + A R F+
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS-TFLAVLSACSHSGLVQD 540
+ + SWNSMI Y+++G+ +A+ LFE M ++G P + TF+ VLSACSH+GL+++
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 541 GQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC 600
G K FESM YG+ P H+SCM D+LGRAG+L+ FI +P+KP IWR + AC
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 601 RCHSDLKMAEFISK---QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISK 657
C ++ + AE K + +L+P++A YV L NMYA G D + RK MK ++ K
Sbjct: 800 -CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKK 858
Query: 658 EPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNE 706
E G SW+ + + ++ F + +KSH + +Y+KLK+L +++ D G+
Sbjct: 859 EAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQEN 918
Query: 707 KEDRVLYHSERLAVGFGL 724
KE+ + YHSE+LAV F L
Sbjct: 919 KEEILSYHSEKLAVAFVL 936
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 220/463 (47%), Gaps = 20/463 (4%)
Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKN 196
R +H+ + K + D ++ +L+N Y + GD S V +MP + S C+++GY++N
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 197 ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE--GKQLHAQTMKLQYLSKTA 254
+A F + + N Y + ++L C + ++ G+Q+H KL Y
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 255 VSNALLTMYIKC-GMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRED 313
VSN L++MY KC G + A F + +N +SW +II+ + Q GD R+ M+ D
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 314 GIDPNEYTFTVALASCASLRNSHMGYM--FHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
G P EYTF + + SL + + + K G+ FVG+ +V ++ G +
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLS 260
Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
A+K +M ++ ++V+ N + G R + EEA + F M + + + S +
Sbjct: 261 YARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDM----NSMIDVSPESYVILL 315
Query: 432 SLLPSLATCE--------QIHSRIVKSKF-ESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
S P + E ++H ++ + + V +G+ L+ Y KCGS DA RVF +
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
T D VSWNSMI QNG +A+ ++ M I P + T ++ LS+C+ + GQ
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLP 585
++ +K GI + + ++ L G L S++P
Sbjct: 436 QIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 155/662 (23%), Positives = 287/662 (43%), Gaps = 54/662 (8%)
Query: 45 SYSACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTV 104
S SA ++F++ P R +S + ++ G SRNG F + +G
Sbjct: 52 SVSARKVFDEMPLRNCVSWACIV---------SGYSRNGEHKEALVFLRDMVKEG----- 97
Query: 105 PVTCYSLESLLDKQFV-IEVLSYCSREECLEL--GRRYHALITKTAVCGDQFVTASLVNM 161
+ Q+ + VL C + + GR+ H L+ K + D V+ L++M
Sbjct: 98 ---------IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 162 YAKC-GDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYT 220
Y KC G + + + + S N +++ Y++ AF F + +P YT
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 221 YSTMLAICGSLSAIDEG--KQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
+ +++ SL+ D +Q+ K L+ V + L++ + K G + A VF
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQ 268
Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA-----SCASLR 333
+ RN ++ ++ G + E+ +L M ID + ++ + L+ S A
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEV 327
Query: 334 NSHMGYMFHAQVIKRGMALGDF---VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
G H VI G+ DF +G +V+MY+ G I +A++ M SVSWN
Sbjct: 328 GLKKGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFM-TDKDSVSWN 384
Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
+ I G +N EA+E + M R+D FT S L +C+ L +QIH +K
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRAR-KAIIL 509
+ NV V ++L+ Y + G + ++FS + D VSWNS+I A +++ R+ +A++
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 510 FEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLG 569
F G + TF +VLSA S + G+++ +K I E + ++ G
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYG 563
Query: 570 RAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDL--KMAEFISKQILELDPDDAAVY 627
+ G+++ S + + W + + H++L K + + + D+ +Y
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 628 VTLSNMYA-----EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSE 682
T+ + +A E G++ A R ++ + G + +++Y+K R + +
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVV---VGSALVDMYSKCGRLDYALRFFNT 679
Query: 683 MP 684
MP
Sbjct: 680 MP 681
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 348 bits (894), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 311/551 (56%), Gaps = 9/551 (1%)
Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
+GR+ HAL+ K + GD +V SLV MY K G ++ + V MP + + + +++GYA
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 195 KNALFDQA---FSFFL--KLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY 249
++A F+ FL K +G D + Y ++ +L+ + + G+Q+H T+K
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSD---SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 250 LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCL 309
L A+SNAL+TMY KC + +A +F+ RN I+W+A++ G+ Q+G+ + ++L
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 310 MREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGE 369
M GI P+EYT L +C+ + G H+ ++K G F TA+VDMY+ G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 370 IWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILK 429
+ +A+K + + ++ W + I+G+ +N EEA+ + +M ++ T +S+LK
Sbjct: 373 LADARKGFDCLQERDVAL-WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 430 ACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVS 489
ACS L +L +Q+H +K F V +GS+L Y+KCGS ED VF + DVVS
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 490 WNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMV 549
WN+MI S NG+ +A+ LFE+M+ EG+ P + TF+ ++SACSH G V+ G F M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
+ G+ P+ HY+CMVDLL RAG+L+ A FI + I +WR L +AC+ H ++
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
+ ++++ L +++ YV LS +Y G D E K M+ +SKE GCSWIE+ N+
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671
Query: 670 IYRFFSQNKSH 680
+ F + H
Sbjct: 672 YHVFVVGDTMH 682
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 252/512 (49%), Gaps = 12/512 (2%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
+++ L++ S++ L GR H I +T LVN YAKCG + ++ +
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 180 YLDIASCNCLLAGYAKNALFDQAFS---FFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
D+ S N L+ GY++N +++ F ++ D+ PN YT + + SL +
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
G+Q HA +K+ V +L+ MY K G++ED VF + +RN +W+ +++G+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 297 HGDYEKPLRLVCLM---REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALG 353
G E+ +++ L +E+G D ++Y FT L+S A+ +G H IK G+
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSD-SDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 354 DFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV 413
+ A+V MYS + EA K G +S++W+A + G+ +N ++ EA++ FS+M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 414 RNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
E+T +L ACS + L +Q+HS ++K FE ++ ++L++ Y K G
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
DA + F L DV W S+I Y QN +A+IL+ +M GI P + T +VL ACS
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
++ G++V +K +G E S + + + G LE + P K W
Sbjct: 435 SLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS-W 492
Query: 594 RPLFAACRCHSDLKMAEFISKQILE--LDPDD 623
+ + + A + +++L ++PDD
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDD 524
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 214/447 (47%), Gaps = 27/447 (6%)
Query: 116 DKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
D +V VLS + + LGR+ H + K + G ++ +LV MY+KC + +
Sbjct: 219 DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKM 278
Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
+ + + ++ GY++N +A F ++ ++P+ YT +L C + +
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 235 DEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGF 294
+EGKQLH+ +KL + + AL+ MY K G + DA F+ L +R+V WT++I+G+
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 295 KQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
Q+ D E+ L L M+ GI PN+ T L +C+SL +G H IK G L
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEV 458
Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
+G+A+ MYS G + + + + VSWNA I+G N + +EA+E F +M+
Sbjct: 459 PIGSALSTMYSKCGSLEDGNLVFRRT-PNKDVVSWNAMISGLSHNGQGDEALELFEEMLA 517
Query: 415 NDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKF------------ESNVHVGSSL 462
D+ T+ +I+ ACS H V+ + + V + +
Sbjct: 518 EGMEPDDVTFVNIISACS-----------HKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Query: 463 IEAYNKCGSWEDA-ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPT 521
++ ++ G ++A E + S + W ++ A +G+ + EK++ G R +
Sbjct: 567 VDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRES 626
Query: 522 NSTFLAVLSACSHSGLVQDGQKVFESM 548
ST++ + + G ++D ++V++ M
Sbjct: 627 -STYVQLSGIYTALGRMRDVERVWKHM 652
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 180/417 (43%), Gaps = 51/417 (12%)
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
++P+ T L + RN G H Q+I+ G + +V+ Y+ G++ +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRN---QKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
+ VSWN+ I G+ +N + ++ F +M D + +T + I KA
Sbjct: 70 SIFNAI-ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
S L S Q H+ +VK +++V +SL+ Y K G ED +VF+ + + +W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMV 549
+M+ Y+ GR +AI +F + E ++S F AVLS+ + + V G+++ +
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 550 KEYGILPEEA-------------------------------HYSCMVDLLGRAGK-LEIA 577
K G+L A +S MV + G+ LE
Sbjct: 249 KN-GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 578 LIF--ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVT-LSNMY 634
+F + + IKP+ + AC L+ + + +L+L + T L +MY
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 635 AEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
A+AG ADA + ++ ++++ ++ + + QN + E +Y ++K
Sbjct: 368 AKAGCLADARKGFDCLQERDVA---------LWTSLISGYVQNSDNEEALILYRRMK 415
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 348 bits (893), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 326/622 (52%), Gaps = 15/622 (2%)
Query: 133 LELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
+ LGR HA I KT F+ L+NMY+K +S V++ P ++ S L++
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLS 251
G A+N F A F ++ V PN +T+ SL GKQ+HA +K +
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 252 KTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
V + MY K + +DA +F+ + +RN+ +W A I+ G + + R
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
PN TF L +C+ + ++G H V++ G V ++D Y +I
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
++ EMG + ++VSW + +A + +N + E+A + + ++ +F SS+L AC
Sbjct: 262 SSEIIFTEMG-TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
+ + L IH+ VK+ E + VGS+L++ Y KCG ED+E+ F ++ ++V+ N
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNS--TFLAVLSACSHSGLVQDGQKVFESMV 549
S+I Y+ G+ A+ LFE+M G PT + TF+++LSACS +G V++G K+F+SM
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 550 KEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMA 609
YGI P HYSC+VD+LGRAG +E A FI +PI+PT +W L ACR H ++
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 610 EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNK 669
++ + +LDP D+ +V LSN +A AG A+A R+ +K I K G SWI V N+
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560
Query: 670 IYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT-----------DNEKEDRVLYHSERL 718
++ F ++++SH ++ L +L ++E G+ + EK V +HSE+L
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620
Query: 719 AVGFGLISLPAKNKFECSRTLE 740
A+ FGL+SLP ++ L
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLR 642
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 320/581 (55%), Gaps = 2/581 (0%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
VLS C+ + ++LG + H L+ + V + + SL++MY+KCG + + M D
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
+ NC+++GY ++ L +++ +FF ++ V P+ T+S++L ++ KQ+H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
M+ +++AL+ Y KC + A+++F +V+ +TA+I+G+ +G Y
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
L + + + I PNE T L L +G H +IK+G +G A++D
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484
Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEF 422
MY+ G + A + + + K VSWN+ I ++ AI+ F QM + D
Sbjct: 485 MYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 423 TYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL 482
+ S+ L AC+ LPS + + IH ++K S+V+ S+LI+ Y KCG+ + A VF +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 483 TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDG 541
++VSWNS+I A +G+ + ++ LF +MV + GIRP TFL ++S+C H G V +G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Query: 542 QKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
+ F SM ++YGI P++ HY+C+VDL GRAG+L A + ++P P A +W L ACR
Sbjct: 664 VRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACR 723
Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGC 661
H ++++AE S ++++LDP ++ YV +SN +A A + R LMK +E+ K PG
Sbjct: 724 LHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGY 783
Query: 662 SWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
SWIE+ + + F S + +H E +Y L L+ ++ G+
Sbjct: 784 SWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGY 824
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 231/475 (48%), Gaps = 6/475 (1%)
Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
++FV +SL+ Y + G I + ++ D N +L GYAK D F +
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
+ PN T+ +L++C S ID G QLH + + ++ N+LL+MY KCG +
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
DA +F + + + ++W +I+G+ Q G E+ L M G+ P+ TF+ L S +
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
N H +++ ++L F+ +A++D Y + A+ + S V +
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC-NSVDVVVFT 410
Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
A I+G+ N +++E F +V+ + +E T SIL +L +L ++H I+K
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILF 510
F++ ++G ++I+ Y KCG A +F +L+ D+VSWNSMI +Q+ AI +F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 511 EKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGR 570
+M V GI + A LSAC++ G+ + M+K + + + S ++D+ +
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAK 589
Query: 571 AGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE---LDPD 622
G L+ A+ + K W + AAC H LK + + +++E + PD
Sbjct: 590 CGNLKAAMNVFKTMKEKNIVS-WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 231/481 (48%), Gaps = 7/481 (1%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL- 181
+L CS L G++ HA + ++ GD + ++ MYA CG + ++
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 182 -DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
I N +++ + +N L +QA +F+ K+ V P+ T+ ++ C +L L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
L V+++L+ Y++ G ++ +F+ ++Q++ + W ++NG+ + G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
+ ++ +MR D I PN TF L+ CAS +G H V+ G+ + ++
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
+ MYS G +A K + M + A +V+WN I+G+ ++ EE++ F +M+ + D
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
T+SS+L + S +L C+QIH I++ ++ + S+LI+AY KC A+ +FS
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
Q + DVV + +MI Y NG ++ +F +V I P T +++L ++
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 541 GQKVFESMVKEYGILPEEAHYSC-MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
G+++ ++K+ + C ++D+ + G++ +A L + W +
Sbjct: 460 GRELHGFIIKKG--FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITR 516
Query: 600 C 600
C
Sbjct: 517 C 517
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 7/316 (2%)
Query: 222 STMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQ 281
S +L C + + + +GKQ+HA + + +L MY CG D +F L
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98
Query: 282 R--NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY 339
R ++ W +II+ F ++G + L M G+ P+ TF + +C +L+N
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158
Query: 340 MFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRN 399
V GM +FV ++++ Y G+I + +L + V WN + G+ +
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKI-DVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 400 QKTEEAIEAFSQMVRNDAACDEFTYSSILKACS--LLPSLATCEQIHSRIVKSKFESNVH 457
+ I+ FS M + + + T+ +L C+ LL L Q+H +V S +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV--QLHGLVVVSGVDFEGS 275
Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
+ +SL+ Y+KCG ++DA ++F ++ AD V+WN MI Y Q+G +++ F +M+ G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 518 IRPTNSTFLAVLSACS 533
+ P TF ++L + S
Sbjct: 336 VLPDAITFSSLLPSVS 351
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
++ L +C++ G HA +I ++ + I+ MY+ G + K +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 382 KSASSV-SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
SS+ WN+ I+ F RN +A+ + +M+ + D T+ ++KAC L +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
+ + + + N V SSLI+AY + G + ++F ++ D V WN M+ Y++
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
G I F M ++ I P TF VLS C+ L+ G ++ +V G+ E +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSI 276
Query: 561 YSCMVDLLGRAGKLEIA 577
+ ++ + + G+ + A
Sbjct: 277 KNSLLSMYSKCGRFDDA 293
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 350/649 (53%), Gaps = 30/649 (4%)
Query: 120 VIEVLSYCSR---EECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVK 176
++ V++ CS E L +G++ HA + + F+ +LV MY K G + S ++
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
D+ + N +L+ +N +A + ++ V+P+ +T S++L C L +
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 237 GKQLHAQTMKLQYLSKTA-VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
GK+LHA +K L + + V +AL+ MY C + VF+G+ R + W A+I G+
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 296 QHGDYEKPLRLVCLMRED-GIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
Q+ ++ L L M E G+ N T + +C H V+KRG+
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM-- 412
FV ++DMYS LG+I A + +M + V+WN I G+ ++ E+A+ +M
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 499
Query: 413 ---------VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLI 463
R + T +IL +C+ L +LA ++IH+ +K+ ++V VGS+L+
Sbjct: 500 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 559
Query: 464 EAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNS 523
+ Y KCG + + +VF Q+ +V++WN +I AY +G ++AI L M+V+G++P
Sbjct: 560 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 619
Query: 524 TFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISN 583
TF++V +ACSHSG+V +G ++F M +YG+ P HY+C+VDLLGRAG+++ A ++
Sbjct: 620 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 584 LPIK-PTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQAD 642
+P A W L A R H++L++ E ++ +++L+P+ A+ YV L+N+Y+ AGL
Sbjct: 680 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 739
Query: 643 AEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGH 702
A E R+ MK + + KEPGCSWIE +++++F + + SH + K+ L+ L +++ G+
Sbjct: 740 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 799
Query: 703 T-----------DNEKEDRVLYHSERLAVGFGLISLPAKNKFECSRTLE 740
++EKE + HSE+LA+ FG+++ ++ L
Sbjct: 800 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 848
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 201/396 (50%), Gaps = 9/396 (2%)
Query: 189 LLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQ 248
LL ++ L +A ++ + + ++P++Y + +L L ++ GKQ+HA K
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 249 Y-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV 307
Y + V+N L+ +Y KCG VF+ + +RN +SW ++I+ +E L
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 308 CLMREDGIDPNEYTFTVALASCASL---RNSHMGYMFHAQVIKRGMALGDFVGTAIVDMY 364
M ++ ++P+ +T + +C++L MG HA +++G L F+ +V MY
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 365 SGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTY 424
LG++ +K L G V+WN ++ +N++ EA+E +MV DEFT
Sbjct: 247 GKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTI 305
Query: 425 SSILKACSLLPSLATCEQIHSRIVKS-KFESNVHVGSSLIEAYNKCGSWEDAERVFSQLT 483
SS+L ACS L L T +++H+ +K+ + N VGS+L++ Y C RVF +
Sbjct: 306 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF 365
Query: 484 AADVVSWNSMIKAYSQNGRARKAIILFEKM-VVEGIRPTNSTFLAVLSACSHSGLVQDGQ 542
+ WN+MI YSQN ++A++LF M G+ ++T V+ AC SG +
Sbjct: 366 DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKE 425
Query: 543 KVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL 578
+ +VK G+ + + ++D+ R GK++IA+
Sbjct: 426 AIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAM 460
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 239/490 (48%), Gaps = 21/490 (4%)
Query: 133 LELGRRYHALITKTAVCGDQFVTA-SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLA 191
+ELG++ HA + K D A +LVN+Y KCGD ++ V ++ + S N L++
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 192 GYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL---SAIDEGKQLHAQTMKLQ 248
++ A F + +V+P+ +T +++ C +L + GKQ+HA ++
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG 232
Query: 249 YLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVC 308
L+ + + N L+ MY K G + ++ + R++++W +++ Q+ + L +
Sbjct: 233 ELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 309 LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRG-MALGDFVGTAIVDMYSGL 367
M +G++P+E+T + L +C+ L G HA +K G + FVG+A+VDMY
Sbjct: 292 EMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 351
Query: 368 GEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDA-ACDEFTYSS 426
++ ++ M + WNA IAG+ +N+ +EA+ F M + + T +
Sbjct: 352 KQVLSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 427 ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAAD 486
++ AC + + E IH +VK + + V ++L++ Y++ G + A R+F ++ D
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 470
Query: 487 VVSWNSMIKAYSQNGRARKAIILFEKM------VVEG-----IRPTNSTFLAVLSACSHS 535
+V+WN+MI Y + A++L KM V +G ++P + T + +L +C+
Sbjct: 471 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 530
Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
+ G+++ +K + + A S +VD+ + G L+++ +P K W
Sbjct: 531 SALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNV 588
Query: 596 LFAACRCHSD 605
+ A H +
Sbjct: 589 IIMAYGMHGN 598
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 15/336 (4%)
Query: 111 LESLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQ-FVTASLVNMYAKCGDI 168
LE + +F I VL CS E L G+ HA K + FV ++LV+MY C +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 169 KSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAI 227
S V M I N ++AGY++N +A F+ + + + N T + ++
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 228 CGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISW 287
C A + +H +K V N L+ MY + G ++ A +F + R++++W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 288 TAIINGFKQHGDYEKPLRLVCLMR-----------EDGIDPNEYTFTVALASCASLRNSH 336
+I G+ +E L L+ M+ + PN T L SCA+L
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
G HA IK +A VG+A+VDMY+ G + ++K ++ + + ++WN I +
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAY 593
Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
+ +EAI+ M+ +E T+ S+ ACS
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 629
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 125/260 (48%), Gaps = 15/260 (5%)
Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
+ +S S W + R+ EA+ + M+ D + + ++LKA + L +
Sbjct: 56 ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMEL 115
Query: 440 CEQIHSRIVKSKFE-SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYS 498
+QIH+ + K + +V V ++L+ Y KCG + +VF +++ + VSWNS+I +
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 499 QNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH----SGLVQDGQKVFESMVKEYGI 554
+ A+ F M+ E + P++ T ++V++ACS+ GL+ Q V YG+
Sbjct: 176 SFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ------VHAYGL 229
Query: 555 LPEEAH---YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
E + + +V + G+ GKL + + + + + L + C+ L+ E+
Sbjct: 230 RKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 612 ISKQILE-LDPDDAAVYVTL 630
+ + +LE ++PD+ + L
Sbjct: 290 LREMVLEGVEPDEFTISSVL 309
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 345 bits (885), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 225/739 (30%), Positives = 366/739 (49%), Gaps = 90/739 (12%)
Query: 38 EVKEPFASYSACQLFN---KSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDG 94
EV E SY C ++N + +GL ++ ++ + GIS + Y+ FP G
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILL--FLRMMNSGISPDKYT-----FPFG 140
Query: 95 FIDDGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFV 154
LS C++ G + H LI K D FV
Sbjct: 141 -----------------------------LSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 155 TASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGID 213
SLV+ YA+CG++ S V +M ++ S ++ GYA+ A F ++ +
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 214 VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
V PN T +++ C L ++ G++++A + +AL+ MY+KC ++ A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
+F+ N+ A+ + + + G + L + LM + G+ P+ + A++SC+ LR
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMY----------------------------S 365
N G H V++ G D + A++DMY +
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 366 GL---GEI---WEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA- 418
G GE+ WE + + E + VSWN I+G + EEAIE F M +
Sbjct: 412 GYVENGEVDAAWETFETMPE----KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
D T SI AC L +L + I+ I K+ + +V +G++L++ +++CG E A +
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
F+ LT DV +W + I A + G A +AI LF+ M+ +G++P F+ L+ACSH GLV
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
Q G+++F SM+K +G+ PE+ HY CMVDLLGRAG LE A+ I ++P++P IW L A
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
ACR +++MA + +++I L P+ YV LSN+YA AG D + R MK K + K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 659 PGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDR 710
PG S I++ K + F S ++SH EMP + L ++ Q+ +GH D +++++
Sbjct: 708 PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEK 767
Query: 711 VLY---HSERLAVGFGLIS 726
+ HSE+LA+ +GLIS
Sbjct: 768 IFMLSRHSEKLAMAYGLIS 786
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/605 (32%), Positives = 330/605 (54%), Gaps = 20/605 (3%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
GR H + + +++V MY K ++ V +MP D N +++GY K
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE---GKQLHAQTMKLQYLSK 252
N ++ ++ F L I+ +T+L I +++ + E G Q+H+ K S
Sbjct: 198 NEMYVESIQVFRDL--INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
V +++Y KCG ++ ++F + +++++ A+I+G+ +G+ E L L +
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
G T + L + Y H +K V TA+ +YS L EI
Sbjct: 316 SGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
A+K E S SWNA I+G+ +N TE+AI F +M +++ + + T + IL AC+
Sbjct: 373 ARKLFDE-SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNS 492
L +L+ + +H + + FES+++V ++LI Y KCGS +A R+F +T + V+WN+
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 493 MIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEY 552
MI Y +G+ ++A+ +F +M+ GI PT TFL VL ACSH+GLV++G ++F SM+ Y
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY 551
Query: 553 GILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFI 612
G P HY+CMVD+LGRAG L+ AL FI + I+P + +W L ACR H D +A +
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTV 611
Query: 613 SKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYR 672
S+++ ELDPD+ +V LSN+++ A R+ K ++++K PG + IE+ +
Sbjct: 612 SEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHV 671
Query: 673 FFSQNKSHSEMPKVYEKLKQLMQQIEDIGHT--------DNEKEDRVL---YHSERLAVG 721
F S ++SH ++ ++YEKL++L ++ + G+ D E+E+R L HSERLA+
Sbjct: 672 FTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIA 731
Query: 722 FGLIS 726
FGLI+
Sbjct: 732 FGLIA 736
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 197/420 (46%), Gaps = 41/420 (9%)
Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
LD ++++L + + L LG + H+L TKT +V +++Y+KCG IK A+
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LKLDGIDVQPNHYTYSTMLAICGSLS 232
++ DI + N ++ GY N + + S F L L G ++ + T +++ + G L
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS--TLVSLVPVSGHLM 336
Query: 233 AIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIIN 292
I +H +K +LS +VS AL T+Y K +E A +F+ ++++ SW A+I+
Sbjct: 337 LI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 293 GFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
G+ Q+G E + L M++ PN T T L++CA L +G H V
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
+V TA++ MY+ G I EA++ M K + V+WN I+G+ + + +EA+ F +M
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKK-NEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
+ + T+ +L ACS H+ +VK E + +S+I Y
Sbjct: 513 LNSGITPTPVTFLCVLYACS-----------HAGLVKEGDE----IFNSMIHRYG----- 552
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
V + M+ + G ++A+ E M +E P +S + +L AC
Sbjct: 553 ----------FEPSVKHYACMVDILGRAGHLQRALQFIEAMSIE---PGSSVWETLLGAC 599
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 228/520 (43%), Gaps = 47/520 (9%)
Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
D+ N L+ G++ N + S F L D++PN TY+ ++ G+ +
Sbjct: 82 DVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVI 141
Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
H Q + S+ + + ++ MY K +EDA VF+ + +++ I W +I+G++++ Y
Sbjct: 142 HGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMY 201
Query: 301 EKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
+ +++ L+ E + T L + A L+ +G H+ K G D+V T
Sbjct: 202 VESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTG 261
Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
+ +YS G+I +E K V++NA I G+ N +TE ++ F +++ + A
Sbjct: 262 FISLYSKCGKIKMGSALFREFRK-PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320
Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVF 479
T S++ L IH +KS F S+ V ++L Y+K E A ++F
Sbjct: 321 RSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
+ + SWN+MI Y+QNG AI LF +M P T +LSAC+ G +
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 540 DGQKV--------FES----------MVKEYGILPE------------EAHYSCMVDLLG 569
G+ V FES M + G + E E ++ M+ G
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 570 RAGKLEIAL-IF--ISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAV 626
G+ + AL IF + N I PT + + AC +K + I ++ + +V
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 627 --YVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCS-W 663
Y + ++ AG QR L ++ +S EPG S W
Sbjct: 558 KHYACMVDILGRAG-----HLQRALQFIEAMSIEPGSSVW 592
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 127/288 (44%), Gaps = 28/288 (9%)
Query: 47 SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
SA +LF++SP+++ L + + + +GY + G++ + S + F N V +
Sbjct: 372 SARKLFDESPEKS-LPSWNAMISGYT---QNGLTEDAISLFREMQKSEF----SPNPVTI 423
Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
TC +LS C++ L LG+ H L+ T +V+ +L+ MYAKCG
Sbjct: 424 TC--------------ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 167 DIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLA 226
I + M + + N +++GY + +A + F ++ + P T+ +L
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 227 ICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRN 283
C + EG ++ +M +Y + +V + ++ + + G ++ A E + ++
Sbjct: 530 ACSHAGLVKEGDEIF-NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 284 VISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCAS 331
W ++ + H D + + E +DP+ + V L++ S
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLSNIHS 634
>sp|Q9MA85|PP215_ARATH Pentatricopeptide repeat-containing protein At3g05340
OS=Arabidopsis thaliana GN=PCMP-E83 PE=2 SV=2
Length = 658
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 321/596 (53%), Gaps = 13/596 (2%)
Query: 123 VLSYCSREECL-ELGRRYHALITKTA-----VCGD-----QFVTASLVNMYAKCGDIKSM 171
+LS C RE LG HA I K V D V SL+++YAKCG +
Sbjct: 50 LLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA 109
Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
+ + +MP D+ S N + G+ +N + F ++ G +H T + +L++C +
Sbjct: 110 IKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG-SGGFDHATLTIVLSVCDTP 168
Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
K +HA + Y + +V N L+T Y KCG VF+G+ RNVI+ TA+I
Sbjct: 169 EFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVI 228
Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
+G ++ +E LRL LMR + PN T+ ALA+C+ + G HA + K G+
Sbjct: 229 SGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIE 288
Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
+ +A++DMYS G I +A + E VS + G +N EEAI+ F +
Sbjct: 289 SELCIESALMDMYSKCGSIEDAW-TIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIR 347
Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGS 471
M++ D S++L + SL +Q+HS ++K KF N V + LI Y+KCG
Sbjct: 348 MLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGD 407
Query: 472 WEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSA 531
D++ VF ++ + VSWNSMI A++++G A+ L+E+M ++PT+ TFL++L A
Sbjct: 408 LTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHA 467
Query: 532 CSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAP 591
CSH GL+ G+++ M + +GI P HY+C++D+LGRAG L+ A FI +LP+KP
Sbjct: 468 CSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCK 527
Query: 592 IWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
IW+ L AC H D ++ E+ ++Q+ + PD ++ ++ ++N+Y+ G + + K MK
Sbjct: 528 IWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMK 587
Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEK 707
++KE G S IE+ +K + F ++K H + +Y+ L L + D G+ +++
Sbjct: 588 AMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKR 643
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 18/347 (5%)
Query: 82 NGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESLLDKQFV-------IEVLSYCSREECLE 134
+G S RN I N + L SL+ + V + L+ CS + +
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273
Query: 135 LGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYA 194
G++ HAL+ K + + + ++L++MY+KCG I+ + + +D S +L G A
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 195 KNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
+N ++A FF+++ V+ + S +L + +++ GKQLH+ +K ++ T
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
V+N L+ MY KCG + D+++VF + +RN +SW ++I F +HG L+L M
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVG------TAIVDMYSGLG 368
+ P + TF L +C SH+G + + + M + T I+DM G
Sbjct: 454 VKPTDVTFLSLLHAC-----SHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 369 EIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
+ EAK + + W A + + TE A Q+ +
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQT 555
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 342 bits (878), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 211/626 (33%), Positives = 333/626 (53%), Gaps = 30/626 (4%)
Query: 119 FVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM 178
FVI+ ++ S LE G++ HA++ K D +V SL+++Y K G V ++M
Sbjct: 135 FVIKSVAGIS---SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 179 PYLDIASCNCLLAGYAKNALFD--QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
P DI S N +++GY AL D + F ++ +P+ ++ + L C + +
Sbjct: 192 PERDIVSWNSMISGYL--ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 237 GKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
GK++H ++ + V ++L MY K G + AE +F G++QRN+++W +I +
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 296 QHGDYEKPLRLVCLMR---EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
++G +C + ++G+ P+ T L + A L G H ++RG
Sbjct: 310 RNGRVTDAF--LCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLP 363
Query: 353 GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQM 412
+ TA++DMY G++ A+ M + + +SWN+ IA + +N K A+E F ++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 413 VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSW 472
+ D T +SIL A + SL+ +IH+ IVKS++ SN + +SL+ Y CG
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 473 EDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSAC 532
EDA + F+ + DVVSWNS+I AY+ +G R ++ LF +M+ + P STF ++L+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 533 SHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPI 592
S SG+V +G + FESM +EYGI P HY CM+DL+GR G A F+ +P PTA I
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 593 WRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKM 652
W L A R H D+ +AEF ++QI +++ D+ YV L NMYAEAG D + LM+
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 653 KEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQI--EDI-GHTDNEKED 709
K IS+ S +E K + F + ++SH K+YE L + + + EDI H +
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRP 722
Query: 710 RVLY---------HSERLAVGFGLIS 726
L HS RLA FGLIS
Sbjct: 723 ETLVKSRSNSPRRHSVRLATCFGLIS 748
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 267/519 (51%), Gaps = 18/519 (3%)
Query: 177 QMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDE 236
+M D N ++ G+ L+ +A F+ ++ V+ + +TY ++ +S+++E
Sbjct: 89 EMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEE 148
Query: 237 GKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQ 296
GK++HA +KL ++S V N+L+++Y+K G DAE VFE + +R+++SW ++I+G+
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 297 HGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD-F 355
GD L L M + G P+ ++ AL +C+ + + MG H ++ + GD
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
V T+I+DMYS GE+ A++ M + + V+WN I + RN + +A F +M
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 416 DAACDEFTYSSILKACSLLPSLATCE--QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE 473
+ + ++ + +LLP+ A E IH ++ F ++ + ++LI+ Y +CG +
Sbjct: 328 NGLQPD-----VITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382
Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
AE +F ++ +V+SWNS+I AY QNG+ A+ LF+++ + P ++T ++L A +
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
S + +G+++ +VK + +V + G LE A +++ +K W
Sbjct: 443 ESLSLSEGREIHAYIVKSR-YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS-W 500
Query: 594 RPLFAACRCHSDLKMAEFISKQIL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMK 651
+ A H +++ ++ +++ ++P+ + + +L + +G+ + E + MK
Sbjct: 501 NSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST-FASLLAACSISGMVDEGWEYFESMK 559
Query: 652 MKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKL 690
+E +PG IE Y + + + S + E++
Sbjct: 560 -REYGIDPG---IEHYGCMLDLIGRTGNFSAAKRFLEEM 594
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 172/334 (51%), Gaps = 9/334 (2%)
Query: 268 MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALA 327
+MEDA +F+ + + + W +I GF G Y + ++ M G+ + +T+ +
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 328 SCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSV 387
S A + + G HA VIK G +V +++ +Y LG W+A+K +EM + V
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER-DIV 197
Query: 388 SWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
SWN+ I+G+ ++ F +M++ D F+ S L ACS + S ++IH
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 448 VKSKFES-NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKA 506
V+S+ E+ +V V +S+++ Y+K G AER+F+ + ++V+WN MI Y++NGR A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 507 IILFEKMVVE-GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
+ F+KM + G++P T + +L A + + +G+ + ++ G LP + ++
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALI 372
Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
D+ G G+L+ A + + K W + AA
Sbjct: 373 DMYGECGQLKSAEVIFDRMAEKNVIS-WNSIIAA 405
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 31/173 (17%)
Query: 393 IAGFFRNQKTEEAIEAFSQMVRNDA-----------AC--------------------DE 421
+ GF ++ E+A++ F +M + DA +C D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
FTY ++K+ + + SL ++IH+ ++K F S+V+V +SLI Y K G DAE+VF +
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 482 LTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSH 534
+ D+VSWNSMI Y G +++LF++M+ G +P + ++ L ACSH
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 6/188 (3%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + +L + L GR HA I K+ + + SLV+MYA CGD++
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
+ D+ S N ++ YA + + F ++ V PN T++++LA C +D
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 236 EGKQLHAQTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL--VQRNVISWTAII 291
EG + + ++MK +Y + + +L + + G A+ E + V I W +++
Sbjct: 550 EGWE-YFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI-WGSLL 607
Query: 292 NGFKQHGD 299
N + H D
Sbjct: 608 NASRNHKD 615
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 316/595 (53%), Gaps = 48/595 (8%)
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
+ +LF +A + F+++ P+H + ++L C + + G+ +H ++L
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 253 TAVSNALLTMYIKC-GM-----------------------------------MEDAESVF 276
NAL+ MY K GM ++ VF
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 277 EGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSH 336
E + +++V+S+ II G+ Q G YE LR+V M + P+ +T + L + +
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVI 259
Query: 337 MGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGF 396
G H VI++G+ ++G+++VDMY+ I ++++ + +SWN+ +AG+
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVAGY 318
Query: 397 FRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNV 456
+N + EA+ F QMV +SS++ AC+ L +L +Q+H +++ F SN+
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 457 HVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE 516
+ S+L++ Y+KCG+ + A ++F ++ D VSW ++I ++ +G +A+ LFE+M +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 517 GIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEI 576
G++P F+AVL+ACSH GLV + F SM K YG+ E HY+ + DLLGRAGKLE
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 577 ALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAE 636
A FIS + ++PT +W L ++C H +L++AE ++++I +D ++ YV + NMYA
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 637 AGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQ 696
G + + R M+ K + K+P CSWIE+ NK + F S ++SH M K+ E LK +M+Q
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 697 IEDIGH----------TDNEKEDRVLY-HSERLAVGFGLISLPAKNKFECSRTLE 740
+E G+ D E + +L+ HSERLAV FG+I+ ++ +
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 150/591 (25%), Positives = 246/591 (41%), Gaps = 99/591 (16%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK----------- 164
D VL C+ L G H I + + D + +L+NMYAK
Sbjct: 104 DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVG 163
Query: 165 ------------CGD-------------IKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
GD I S+ V + MP D+ S N ++AGYA++ ++
Sbjct: 164 NVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMY 223
Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
+ A ++ D++P+ +T S++L I + +GK++H ++ S + ++L
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283
Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
+ MY K +ED+E VF L R+ ISW +++ G+ Q+G Y + LRL M + P
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
F+ + +CA L H+G H V++ G F+ +A+VDMYS G I A+K
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS------- 432
M VSW A I G + EA+ F +M R ++ + ++L ACS
Sbjct: 404 M-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 433 --------------------------LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAY 466
LL E+ ++ I K E V S+L+ +
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 467 NKCGSWEDAERVFSQLTAAD---VVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRP--- 520
+ + E AE+V ++ D + ++ M Y+ NGR ++ L +M +G+R
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 521 ------TNSTFLAVLSACSHSGLVQDGQ---KVFESMVKE------YGILP--EEAHYSC 563
N T V SH + + + V E M KE G+L +E H
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 564 MVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
+ L G + +L +A I+ P T + + + CH +K FISK
Sbjct: 643 L--LFGHSERLAVAFGIINTEP-GTTIRVTKNIRICTDCHVAIK---FISK 687
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 180/377 (47%), Gaps = 37/377 (9%)
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
+ KQLHAQ ++ Q LS T+ S ++++Y ++ +A +F+ L V++W ++I F
Sbjct: 23 QAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
+ K L MR G P+ F L SC + + G H +++ GM +
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 356 VGTAIVDMYS---GLGEIWEAKKQLKEMGKSASS-------------------------- 386
G A+++MY+ G+G EM + S+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 387 ------VSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
VS+N IAG+ ++ E+A+ +M D D FT SS+L S +
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
++IH +++ +S+V++GSSL++ Y K ED+ERVFS+L D +SWNS++ Y QN
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
GR +A+ LF +MV ++P F +V+ AC+H + G+++ V G
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLRGGFGSNIFI 380
Query: 561 YSCMVDLLGRAGKLEIA 577
S +VD+ + G ++ A
Sbjct: 381 ASALVDMYSKCGNIKAA 397
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 331/650 (50%), Gaps = 52/650 (8%)
Query: 130 EECLELG--RRYHALITKTAVCGDQFVTASLVNMYA--KCGDIKSMVAVVKQMPYLDIAS 185
E C+ L ++ H + +T D + + L M A ++ V ++P + +
Sbjct: 38 ERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA 97
Query: 186 CNCLLAGYAKNALFDQAFSFFLKLDGI---DVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
N L+ YA D S + LD + PN YT+ ++ +S++ G+ LH
Sbjct: 98 WNTLIRAYASGP--DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
+K S V+N+L+ Y CG ++ A VF + +++V+SW ++INGF Q G +K
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
L L M + + + T L++CA +RN G + + + + + + A++D
Sbjct: 216 ALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLD 275
Query: 363 MYSGLGEIWEAKKQLKEM-------------GKSASS-----------------VSWNAQ 392
MY+ G I +AK+ M G + S V+WNA
Sbjct: 276 MYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNAL 335
Query: 393 IAGFFRNQKTEEAIEAFSQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSK 451
I+ + +N K EA+ F ++ ++ + ++ T S L AC+ + +L IHS I K
Sbjct: 336 ISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG 395
Query: 452 FESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFE 511
N HV S+LI Y+KCG E + VF+ + DV W++MI + +G +A+ +F
Sbjct: 396 IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFY 455
Query: 512 KMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRA 571
KM ++P TF V ACSH+GLV + + +F M YGI+PEE HY+C+VD+LGR+
Sbjct: 456 KMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRS 515
Query: 572 GKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLS 631
G LE A+ FI +PI P+ +W L AC+ H++L +AE ++LEL+P + +V LS
Sbjct: 516 GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Query: 632 NMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
N+YA+ G + E RK M++ + KEPGCS IE+ I+ F S + +H KVY KL
Sbjct: 576 NIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 635
Query: 692 QLMQQIEDIGH------------TDNEKEDRVLYHSERLAVGFGLISLPA 729
++M++++ G+ + KE + HSE+LA+ +GLIS A
Sbjct: 636 EVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 685
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 151/348 (43%), Gaps = 46/348 (13%)
Query: 89 DSFPDGFIDDGCSNTVPVTCYSLESLLDKQ---FVIEVLSYCSREECLELGRRYHALITK 145
+S +GF+ G + +ES K ++ VLS C++ LE GR+ + I +
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 146 TAVCGDQFVTASLVNMYAKCG-------------------------------DIKSMVAV 174
V + + ++++MY KCG D ++ V
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSA 233
+ MP DI + N L++ Y +N ++A F +L +++ N T + L+ C + A
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 234 IDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIING 293
++ G+ +H+ K V++AL+ MY KCG +E + VF + +R+V W+A+I G
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440
Query: 294 FKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGY------MFHAQVIK 347
HG + + + M+E + PN TFT +C SH G +FH
Sbjct: 441 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC-----SHTGLVDEAESLFHQMESN 495
Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
G+ + IVD+ G + +A K ++ M S+ W A +
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAV 174
L++ ++ LS C++ LELGR H+ I K + + VT++L++MY+KCGD++ V
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 175 VKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAI 234
+ D+ + ++ G A + ++A F K+ +V+PN T++ + C +
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 235 DEGKQLHAQTMKLQY--LSKTAVSNALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAII 291
DE + L Q M+ Y + + ++ + + G +E A E + + + W A++
Sbjct: 483 DEAESLFHQ-MESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
Query: 292 NGFKQHGD 299
K H +
Sbjct: 542 GACKIHAN 549
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 209/718 (29%), Positives = 371/718 (51%), Gaps = 48/718 (6%)
Query: 47 SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
+A +++++ P + +ST+ +I +G++ + +R+ + D+ PD + + T+ +
Sbjct: 66 AARKVYDEMPHKNTVSTNTMI-SGHVKTGDVSSARDLF----DAMPDRTV---VTWTILM 117
Query: 107 TCYSLESLLDKQFVI-------------------EVLSYCSREECLELGRRYHALITKTA 147
Y+ S D+ F + +L C+ + HA K
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 148 VCGDQFVTAS--LVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSF 205
+ F+T S L+ Y + + + +++P D + N L+ GY K+ L+ ++
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237
Query: 206 FLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIK 265
FLK+ QP+ +T+S +L L G+QLHA ++ + +V N +L Y K
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 266 CGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVA 325
+ + +F+ + + + +S+ +I+ + Q YE L M+ G D + F
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGD---FVGTAIVDMYSGLGEIWEAKKQLKEMGK 382
L+ A+L + MG H Q + +A D VG ++VDMY+ EA+ K + +
Sbjct: 358 LSIAANLSSLQMGRQLHCQAL---LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 383 SASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQ 442
++VSW A I+G+ + ++ F++M ++ D+ T++++LKA + SL +Q
Sbjct: 415 R-TTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 443 IHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGR 502
+H+ I++S NV GS L++ Y KCGS +DA +VF ++ + VSWN++I A++ NG
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 503 ARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYS 562
AI F KM+ G++P + + L VL+ACSH G V+ G + F++M YGI P++ HY+
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 563 CMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP- 621
CM+DLLGR G+ A + +P +P +W + ACR H + +AE ++++ ++
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
DAA YV++SN+YA AG + +K M+ + I K P SW+EV +KI+ F S +++H
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 682 EMPKVYEKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLP 728
++ K+ +L +IE G+ + K + + YHSERLAV F LIS P
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTP 771
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 172/400 (43%), Gaps = 40/400 (10%)
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
+ +++ A+ +K + + T SN ++ ++ G + A V++ + +N +S +I+G
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 296 QHGDYEK--------PLRLVC----LM----REDGID-----------------PNEYTF 322
+ GD P R V LM R D P+ TF
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 323 TVALASCASLRNSHMGYMFHAQVIKRGMALGDF--VGTAIVDMYSGLGEIWEAKKQLKEM 380
T L C + HA +K G F V ++ Y + + A +E+
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
+ SV++N I G+ ++ E+I F +M ++ +FT+S +LKA L A
Sbjct: 211 PEK-DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
+Q+H+ V + F + VG+ +++ Y+K + +F ++ D VS+N +I +YSQ
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVF-ESMVKEYGILPEEA 559
+ ++ F +M G N F +LS ++ +Q G+++ ++++ +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
+ +VD+ + E A + +LP + T W L +
Sbjct: 390 --NSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALISG 426
Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 435 PSLAT---CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
PS AT ++ +RI+K+ F+++ + ++E + G A +V+ ++ + VS N
Sbjct: 24 PSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTN 83
Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
+MI + + G A LF+ M T T+ ++ + + + K+F M +
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRS 139
Query: 552 YG-ILPEEAHYSCMV---------DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACR 601
LP+ ++ ++ + +G+ + L F +N P + + + R
Sbjct: 140 SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN-PFLTVSNVLLKSYCEVR 198
Query: 602 CHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
L +A + ++I E D+ + TL Y + GL E +KM++ +P
Sbjct: 199 ---RLDLACVLFEEIPE---KDSVTFNTLITGYEKDGLY--TESIHLFLKMRQSGHQP 248
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 339 bits (870), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 295/546 (54%), Gaps = 5/546 (0%)
Query: 122 EVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYL 181
+ L C+ + L+ G++ H + K D V L++MYAKCG+IKS V +
Sbjct: 147 KALKACTELQDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLR 205
Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
++ ++AGY KN L ++ F ++ +V N YTY T++ C LSA+ +GK H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
+K + + +LL MY+KCG + +A VF +++ WTA+I G+ +G
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
+ L L M+ I PN T L+ C + N +G H IK G+ + V A+V
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALV 384
Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDE 421
MY+ + +AK EM V+WN+ I+GF +N EA+ F +M +
Sbjct: 385 HMYAKCYQNRDAKYVF-EMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 422 FTYSSILKACSLLPSLATCEQIHSRIVKSKF--ESNVHVGSSLIEAYNKCGSWEDAERVF 479
T +S+ AC+ L SLA +H+ VK F S+VHVG++L++ Y KCG + A +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQ 539
+ + ++W++MI Y + G ++ LFE+M+ + +P STF ++LSAC H+G+V
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
+G+K F SM K+Y P HY+CMVD+L RAG+LE AL I +PI+P +
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
C HS + E + K++L+L PDDA+ YV +SN+YA G A+E R LMK + +SK
Sbjct: 624 CGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIA 683
Query: 660 GCSWIE 665
G S +E
Sbjct: 684 GHSTME 689
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 22/485 (4%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
+LS C+ + L R+ H ++T + GD + LV++Y G K V Q+P D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 183 IASCNCLLAGYAKN-------ALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
+L Y N L+D + D I +S L C L +D
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDI-------VFSKALKACTELQDLD 159
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
GK++H Q +K+ ++ LL MY KCG ++ A VF + RNV+ WT++I G+
Sbjct: 160 NGKKIHCQLVKVPSFDNVVLT-GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYV 218
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
++ E+ L L MRE+ + NEYT+ + +C L H G FH ++K G+ L
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
+ T+++DMY G+I A++ E V W A I G+ N EA+ F +M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSH-VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV 337
Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
+ + T +S+L C L+ +L +H +K + +V ++L+ Y KC DA
Sbjct: 338 EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDA 396
Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
+ VF + D+V+WNS+I +SQNG +A+ LF +M E + P T ++ SAC+
Sbjct: 397 KYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASL 456
Query: 536 GLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWR 594
G + G + VK + H + ++D + G + A + + K T W
Sbjct: 457 GSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT-WS 515
Query: 595 PLFAA 599
+
Sbjct: 516 AMIGG 520
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 173/327 (52%), Gaps = 12/327 (3%)
Query: 218 HYTYST----MLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAE 273
HY S+ +L+ C + ID +Q H + +++ L+++Y G +DA
Sbjct: 40 HYAASSPCFLLLSKC---TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 274 SVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLR 333
VF+ + + + W ++ + + + + ++L L+ + G ++ F+ AL +C L+
Sbjct: 97 LVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ 156
Query: 334 NSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
+ G H Q++K + + V T ++DMY+ GEI A K ++ + V W + I
Sbjct: 157 DLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDI-TLRNVVCWTSMI 214
Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
AG+ +N EE + F++M N+ +E+TY +++ AC+ L +L + H +VKS E
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 454 SNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKM 513
+ + +SL++ Y KCG +A RVF++ + D+V W +MI Y+ NG +A+ LF+KM
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 514 VVEGIRPTNSTFLAVLSACSHSGLVQD 540
I+P T +VLS C GL+++
Sbjct: 335 KGVEIKPNCVTIASVLSGC---GLIEN 358
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 137/264 (51%), Gaps = 4/264 (1%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
+ VLS C E LELGR H L K + D V +LV+MYAKC + V +
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
DI + N +++G+++N +A F +++ V PN T +++ + C SL ++ G
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 240 LHAQTMKLQYLSKTA--VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQH 297
LHA ++KL +L+ ++ V ALL Y KCG + A +F+ + ++N I+W+A+I G+ +
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 298 GDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFV 356
GD L L M + PNE TFT L++C + G + + + K
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKH 584
Query: 357 GTAIVDMYSGLGEIWEAKKQLKEM 380
T +VDM + GE+ +A +++M
Sbjct: 585 YTCMVDMLARAGELEQALDIIEKM 608
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 415 NDAACDEFTYSS----ILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
ND + + SS +L C+ + SL Q H + + ++ + + L+ Y G
Sbjct: 34 NDGSSLHYAASSPCFLLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFG 90
Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
+DA VF Q+ D W M++ Y N + + + L++ ++ G R + F L
Sbjct: 91 YTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALK 150
Query: 531 ACSHSGLVQDGQKVFESMVKEYGILP--EEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
AC+ + +G+K+ +VK +P + + ++D+ + G+++ A +++ ++
Sbjct: 151 ACTELQDLDNGKKIHCQLVK----VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 589 TAPIWRPLFAA 599
W + A
Sbjct: 207 VV-CWTSMIAG 216
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/681 (28%), Positives = 329/681 (48%), Gaps = 80/681 (11%)
Query: 140 HALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALF 199
HA I K+ D +++A L+ Y+ V++ +P I S + L+ K LF
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 200 DQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
Q+ F ++ + P+ + + +C LSA GKQ+H + V ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 260 LTMYIKCGMMEDAESVFEGL-----------------------------------VQRNV 284
MY++CG M DA VF+ + ++ N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 285 ISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQ 344
+SW I++GF + G +++ + + + G P++ T + L S +MG + H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 345 VIKRGMALGDFVGTAIVDMYSGLGEIW--------------------------------- 371
VIK+G+ V +A++DMY G ++
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 372 -EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKA 430
E + KE + VSW + IAG +N K EA+E F +M + T S+L A
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 431 CSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSW 490
C + +L H V+ NVHVGS+LI+ Y KCG ++ VF+ + ++V W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 491 NSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
NS++ +S +G+A++ + +FE ++ ++P +F ++LSAC GL +G K F+ M +
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 551 EYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAE 610
EYGI P HYSCMV+LLGRAGKL+ A I +P +P + +W L +CR +++ +AE
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 611 FISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKI 670
++++ L+P++ YV LSN+YA G+ + + R M+ + K PGCSWI+V N++
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRV 637
Query: 671 YRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLA 719
Y + +KSH ++ ++ EK+ ++ +++ GH N E+E + HSE+LA
Sbjct: 638 YTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLA 697
Query: 720 VGFGLISLPAKNKFECSRTLE 740
V FGL++ P + + L
Sbjct: 698 VVFGLLNTPDGTPLQVIKNLR 718
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 36/312 (11%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D+ V VL E L +GR H + K + D+ V +++++MY K G + ++++
Sbjct: 251 DQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLF 310
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFF-------LKLDGID--------------- 213
Q ++ CN + G ++N L D+A F ++L+ +
Sbjct: 311 NQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 214 -------------VQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
V+PNH T +ML CG+++A+ G+ H +++ L V +AL+
Sbjct: 371 EALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALI 430
Query: 261 TMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEY 320
MY KCG + ++ VF + +N++ W +++NGF HG ++ + + + + P+
Sbjct: 431 DMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFI 490
Query: 321 TFTVALASCASLRNSHMGYMFHAQVIKR-GMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
+FT L++C + + G+ + + + G+ + +V++ G++ EA +KE
Sbjct: 491 SFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE 550
Query: 380 MGKSASSVSWNA 391
M S W A
Sbjct: 551 MPFEPDSCVWGA 562
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 155/387 (40%), Gaps = 71/387 (18%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + + C+ ++G++ H + + + D FV S+ +MY +CG + V
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 176 KQMPYLDIASCNCLLAGYAKNALFD----------------------------------- 200
+M D+ +C+ LL YA+ +
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 201 QAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALL 260
+A F K+ + P+ T S++L G ++ G+ +H +K L V +A++
Sbjct: 235 EAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMI 294
Query: 261 TMYIKCGMMEDAESVF--------------------EGLVQR---------------NVI 285
MY K G + S+F GLV + NV+
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 286 SWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQV 345
SWT+II G Q+G + L L M+ G+ PN T L +C ++ G H
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 346 IKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEA 405
++ + VG+A++DMY+ G I + + M + + V WN+ + GF + K +E
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRI-NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 406 IEAFSQMVRNDAACDEFTYSSILKACS 432
+ F ++R D +++S+L AC
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACG 500
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 193/494 (39%), Gaps = 81/494 (16%)
Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
Q HA+ +K + +S L+ Y DA+ V + + + S++++I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
+ + + + M G+ P+ + CA L +G H G+ + FV
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 359 AIVDMYSGLGEIWEAKKQLKEM----------------------------------GKSA 384
++ MY G + +A+K M G A
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIH 444
+ VSWN ++GF R+ +EA+ F ++ D+ T SS+L + L IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 445 SRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA------------------- 485
++K + V S++I+ Y K G +F+Q
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 486 ----------------DVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
+VVSW S+I +QNG+ +A+ LF +M V G++P + T ++L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHY-SCMVDLLGRAGKLEIALIFISNLPIKP 588
AC + + G+ V+ + L + H S ++D+ + G++ ++ I + +P K
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVH--LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 589 TAPIWRPLFAACRCHSDLK--MAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQ 646
W L H K M+ F S L PD +++ +++ + G +E
Sbjct: 454 LV-CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD----FISFTSLLSACGQVGLTDEG 508
Query: 647 RKLMKMKEISKEPG 660
K KM +S+E G
Sbjct: 509 WKYFKM--MSEEYG 520
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
+L C L GR H + + + V ++L++MYAKCG I V MP +
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
+ N L+ G++ + + S F L ++P+ +++++L+ CG + DEG + +
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-YF 512
Query: 243 QTMKLQYLSKTAVSN--ALLTMYIKCGMMEDAESVFEGL-VQRNVISWTAIIN 292
+ M +Y K + + ++ + + G +++A + + + + + W A++N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 336 bits (862), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 309/538 (57%), Gaps = 20/538 (3%)
Query: 210 DGIDVQPNHYT--------YSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLT 261
D +V P Y+ +L +C A+ E K H + +++ + N L+
Sbjct: 45 DQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN 104
Query: 262 MYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYT 321
Y KCG +E A VF+G+++R+++SW +I + ++ + L + MR +G +E+T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164
Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
+ L++C ++ H +K + L +VGTA++D+Y+ G I +A + + M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM- 223
Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCE 441
+ SSV+W++ +AG+ +N+ EEA+ + + R ++FT SS++ ACS L +L +
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 442 QIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNG 501
Q+H+ I KS F SNV V SS ++ Y KCGS ++ +FS++ ++ WN++I ++++
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 502 RARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHY 561
R ++ +ILFEKM +G+ P TF ++LS C H+GLV++G++ F+ M YG+ P HY
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403
Query: 562 SCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDP 621
SCMVD+LGRAG L A I ++P PTA IW L A+CR + +L++AE ++++ EL+P
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEP 463
Query: 622 DDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHS 681
++A +V LSN+YA + + RKL++ ++ K G SWI++ +K++ F H
Sbjct: 464 ENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523
Query: 682 EMPKVYEKLKQLMQQIEDIGHTDN-----------EKEDRVLYHSERLAVGFGLISLP 728
+ ++ L L+ + G+ + +KE+ ++ HSE+LA+ FGL+ LP
Sbjct: 524 RIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLP 581
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 164/316 (51%), Gaps = 1/316 (0%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
++ V E+L C+R + + H I + + GD + L+N Y+KCG ++ V
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
M + S N ++ Y +N + +A FL++ + + +T S++L+ CG
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
E K+LH ++K V ALL +Y KCGM++DA VFE + ++ ++W++++ G+
Sbjct: 180 ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
Q+ +YE+ L L + ++ N++T + + +C++L G HA + K G F
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
V ++ VDMY+ G + E+ E+ + + WN I+GF ++ + +E + F +M ++
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLEL-WNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 416 DAACDEFTYSSILKAC 431
+E T+SS+L C
Sbjct: 359 GMHPNEVTFSSLLSVC 374
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 89/163 (54%), Gaps = 4/163 (2%)
Query: 113 SLLDKQFVIE-VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
SL QF + V+ CS L G++ HA+I K+ + FV +S V+MYAKCG ++
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
+ ++ ++ N +++G+AK+A + F K+ + PN T+S++L++CG
Sbjct: 318 YIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHT 377
Query: 232 SAIDEGKQLHAQTMKLQY-LSKTAVS-NALLTMYIKCGMMEDA 272
++EG++ + M+ Y LS V + ++ + + G++ +A
Sbjct: 378 GLVEEGRRFF-KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 206/695 (29%), Positives = 349/695 (50%), Gaps = 39/695 (5%)
Query: 48 ACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSF---PDGFIDDGCSNTV 104
A QLF+ P+R +S + +I + S NG+S +SF + ++G +
Sbjct: 241 ALQLFDIMPERNLVSWNSMI---------RVFSDNGFS--EESFLLLGEMMEENGDGAFM 289
Query: 105 PVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAK 164
P D ++ VL C+RE + LG+ H K + + + +L++MY+K
Sbjct: 290 P----------DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSK 339
Query: 165 CGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL--DGIDVQPNHYTYS 222
CG I + + K ++ S N ++ G++ F ++ G DV+ + T
Sbjct: 340 CGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 223 TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQR 282
+ +C S + K+LH ++K +++ V+NA + Y KCG + A+ VF G+ +
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 283 NVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFH 342
V SW A+I G Q D L M+ G+ P+ +T L++C+ L++ +G H
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 343 AQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
+I+ + FV +++ +Y GE+ + M + S VSWN I G+ +N
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM-EDKSLVSWNTVITGYLQNGFP 578
Query: 403 EEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
+ A+ F QMV + + ACSLLPSL + H+ +K E + + SL
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSL 638
Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
I+ Y K GS + +VF+ L SWN+MI Y +G A++AI LFE+M G P +
Sbjct: 639 IDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 698
Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIAL-IFI 581
TFL VL+AC+HSGL+ +G + + M +G+ P HY+C++D+LGRAG+L+ AL +
Sbjct: 699 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 758
Query: 582 SNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQA 641
+ + IW+ L ++CR H +L+M E ++ ++ EL+P+ YV LSN+YA G
Sbjct: 759 EEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWE 818
Query: 642 DAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIG 701
D + R+ M + K+ GCSWIE+ K++ F + ++ L +I +G
Sbjct: 819 DVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMG 878
Query: 702 H-----------TDNEKEDRVLYHSERLAVGFGLI 725
+ ++ EK +++ HSE+LA+ +GLI
Sbjct: 879 YRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLI 913
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/450 (27%), Positives = 224/450 (49%), Gaps = 15/450 (3%)
Query: 114 LLDKQFVIEVLSYCSREECLELGRRYHALIT-KTAVCGDQFVTASLVNMYAKCGDIKSMV 172
LL ++ + +L + + +E+GR+ H L++ T + D + ++ MYA CG
Sbjct: 81 LLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSR 140
Query: 173 AVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDVQPNHYTYSTMLAICGSL 231
V + ++ N +++ Y++N L+D+ F+++ D+ P+H+TY ++ C +
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGM 200
Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
S + G +H +K + V NAL++ Y G + DA +F+ + +RN++SW ++I
Sbjct: 201 SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260
Query: 292 NGFKQHGDYEKPLRLVCLMREDGID----PNEYTFTVALASCASLRNSHMGYMFHAQVIK 347
F +G E+ L+ M E+ D P+ T L CA R +G H +K
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 348 RGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIE 407
+ + A++DMYS G I A+ K M + + VSWN + GF T +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 408 AFSQMVRN--DAACDEFTYSSILKAC---SLLPSLATCEQIHSRIVKSKFESNVHVGSSL 462
QM+ D DE T + + C S LPSL +++H +K +F N V ++
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL---KELHCYSLKQEFVYNELVANAF 436
Query: 463 IEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTN 522
+ +Y KCGS A+RVF + + V SWN++I ++Q+ R ++ +M + G+ P +
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 523 STFLAVLSACSHSGLVQDGQKVFESMVKEY 552
T ++LSACS ++ G++V +++ +
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 132/273 (48%), Gaps = 15/273 (5%)
Query: 291 INGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFT-----VALASCASLRNSHMGYMFHAQ 344
I+ F + GD +K R V + +D + + + L + ++ MG H Q
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-Q 108
Query: 345 VIKRGMAL--GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKT 402
++ L D + T I+ MY+ G +++ + +S + WNA I+ + RN+
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL-RSKNLFQWNAVISSYSRNELY 167
Query: 403 EEAIEAFSQMVRN-DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSS 461
+E +E F +M+ D D FTY ++KAC+ + + +H +VK+ +V VG++
Sbjct: 168 DEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNA 227
Query: 462 LIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVE----G 517
L+ Y G DA ++F + ++VSWNSMI+ +S NG + ++ +L +M+ E
Sbjct: 228 LVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGA 287
Query: 518 IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK 550
P +T + VL C+ + G+ V VK
Sbjct: 288 FMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 333 bits (855), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 294/522 (56%), Gaps = 16/522 (3%)
Query: 219 YTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEG 278
+ Y +L C A+ +G+++HA +K +YL T + LL Y KC +EDA V +
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 279 LVQRNVISWTAIINGFKQHGDYEKPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHM 337
+ ++NV+SWTA+I+ + Q G + L + +MR DG PNE+TF L SC +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGL 171
Query: 338 GYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF 397
G H ++K FVG++++DMY+ G+I EA+ ++ E VS A IAG+
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR-EIFECLPERDVVSCTAIIAGYA 230
Query: 398 RNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVH 457
+ EEA+E F ++ + + TY+S+L A S L L +Q H +++ +
Sbjct: 231 QLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 458 VGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG 517
+ +SLI+ Y+KCG+ A R+F + +SWN+M+ YS++G R+ + LF M E
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 518 -IRPTNSTFLAVLSACSHSGLVQDGQKVFESMVK-EYGILPEEAHYSCMVDLLGRAGKLE 575
++P T LAVLS CSH + G +F+ MV EYG P HY C+VD+LGRAG+++
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
A FI +P KPTA + L ACR H + + E + ++++E++P++A YV LSN+YA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQ 695
AG AD R +M K ++KEPG SWI+ ++ F + +++H +V K+K++
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISI 530
Query: 696 QIEDIGHT-----------DNEKEDRVLYHSERLAVGFGLIS 726
+++ G+ + +KE +L HSE+LA+ FGLI+
Sbjct: 531 KMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIA 572
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 213/454 (46%), Gaps = 40/454 (8%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
+L+ C + L G+R HA + KT ++ L+ Y KC ++ V+ +MP +
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
+ S +++ Y++ +A + F ++ D +PN +T++T+L C S + GKQ+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
+K Y S V ++LL MY K G +++A +FE L +R+V+S TAII G+ Q G E+
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVD 362
L + + +G+ PN T+ L + + L G H V++R + + +++D
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 363 MYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC--D 420
MYS G + A++ M + +++SWNA + G+ ++ E +E F +++R++ D
Sbjct: 298 MYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHGLGREVLELF-RLMRDEKRVKPD 355
Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
T ++L CS H R+ + N+ G E K G+
Sbjct: 356 AVTLLAVLSGCS-----------HGRMEDTGL--NIFDGMVAGEYGTKPGTEH------- 395
Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQD 540
+ ++ + GR +A ++M +PT ++L AC V
Sbjct: 396 ---------YGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDI 443
Query: 541 GQKVFESMVKEYGILPEEA-HYSCMVDLLGRAGK 573
G+ V +++ I PE A +Y + +L AG+
Sbjct: 444 GESVGRRLIE---IEPENAGNYVILSNLYASAGR 474
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/544 (33%), Positives = 310/544 (56%), Gaps = 5/544 (0%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
V V+S C R + + HA + K+ D V A+L++MY+K GDI V + +
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 180 YLDIAS-CNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGK 238
+ + N ++ ++++ +A F ++ ++ + ++ ++L++ L ++ GK
Sbjct: 414 DIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGK 470
Query: 239 QLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHG 298
Q+H T+K + V ++L T+Y KCG +E++ +F+G+ ++ W ++I+GF ++G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 299 DYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGT 358
+ + L M +DG P+E T L C+S + G H ++ G+ G +G+
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 359 AIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAA 418
A+V+MYS G + + +Q+ + VS ++ I+G+ ++ ++ F MV +
Sbjct: 591 ALVNMYSKCGSL-KLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 419 CDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERV 478
D F SSILKA +L + Q+H+ I K + VGSSL+ Y+K GS +D +
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 479 FSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLV 538
FSQ+ D+++W ++I +Y+Q+G+A +A+ ++ M +G +P TF+ VLSACSH GLV
Sbjct: 710 FSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Query: 539 QDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFA 598
++ SMVK+YGI PE HY CMVD LGR+G+L A FI+N+ IKP A +W L A
Sbjct: 770 EESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLA 829
Query: 599 ACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKE 658
AC+ H ++++ + +K+ +EL+P DA Y++LSN+ AE G + EE RKLMK + KE
Sbjct: 830 ACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKE 889
Query: 659 PGCS 662
PG S
Sbjct: 890 PGWS 893
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 243/486 (50%), Gaps = 14/486 (2%)
Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLD 210
D F+T SL++ Y+ G + + +P D+ SCN +++GY ++ LF+++ FF K+
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 211 GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMME 270
+ + N +Y ++++ C +L A + + T+K+ Y V +AL+ ++ K E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
DA VF + NV W II G ++ +Y L M P+ YT++ LA+CA
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 331 SLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWN 390
SL G + A+VIK G A FV TAIVD+Y+ G + EA + + + S VSW
Sbjct: 263 SLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRI-PNPSVVSWT 320
Query: 391 AQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKS 450
++G+ ++ A+E F +M + + T +S++ AC + Q+H+ + KS
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 451 KFESNVHVGSSLIEAYNKCGSWEDAERVFSQL---TAADVVSWNSMIKAYSQNGRARKAI 507
F + V ++LI Y+K G + +E+VF L ++V N MI ++SQ+ + KAI
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
LF +M+ EG+R + ++LS L G++V +K G++ + S + L
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKS-GLVLDLTVGSSLFTL 494
Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILE--LDPDDAA 625
+ G LE + +P K A W + + + L+ A + ++L+ PD++
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 626 VYVTLS 631
+ L+
Sbjct: 554 LAAVLT 559
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 11/286 (3%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D+ + VL+ CS L G+ H + + + ++LVNMY+KCG +K V
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
++P LD SC+ L++GY+++ L F F + + + S++L
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
G Q+HA K+ ++ +V ++LLTMY K G ++D F + ++I+WTA+I +
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM----FH--AQVIKRG 349
QHG + L++ LM+E G P++ TF L++C SH G + FH + V G
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-----SHGGLVEESYFHLNSMVKDYG 784
Query: 350 MALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
+ + +VD G + EA+ + M ++ W +A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/664 (29%), Positives = 336/664 (50%), Gaps = 76/664 (11%)
Query: 153 FVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGI 212
F ++++ Y+K GD+ S Q+P D S ++ GY + +A +
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 213 DVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCG----- 267
++P +T + +LA + ++ GK++H+ +KL +VSN+LL MY KCG
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 268 --------------------------MMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
M+ A + FE + +R++++W ++I+GF Q G
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDL 260
Query: 302 KPLRLVC-LMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
+ L + ++R+ + P+ +T L++CA+L +G H+ ++ G + V A+
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 361 VDMYSGLGEIWEAKKQLKEMG--------------------------------KSASSVS 388
+ MYS G + A++ +++ G K V+
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVA 380
Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIV 448
W A I G+ ++ EAI F MV + +T +++L S L SL+ +QIH V
Sbjct: 381 WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 449 KSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAA-DVVSWNSMIKAYSQNGRARKAI 507
KS +V V ++LI Y K G+ A R F + D VSW SMI A +Q+G A +A+
Sbjct: 441 KSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
LFE M++EG+RP + T++ V SAC+H+GLV G++ F+ M I+P +HY+CMVDL
Sbjct: 501 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 560
Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVY 627
GRAG L+ A FI +PI+P W L +ACR H ++ + + ++++L L+P+++ Y
Sbjct: 561 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 628 VTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVY 687
L+N+Y+ G +A + RK MK + KE G SWIEV +K++ F ++ +H E ++Y
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 688 EKLKQLMQQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGLISLPAKNKFECS 736
+K++ +I+ +G+ + KE + +HSE+LA+ FGLIS P K
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIM 740
Query: 737 RTLE 740
+ L
Sbjct: 741 KNLR 744
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 217/482 (45%), Gaps = 69/482 (14%)
Query: 237 GKQLHAQTMKLQYLSKTAVS-NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
G LHA+ + + +TA S N +L+ Y K G M+ F+ L QR+ +SWT +I G+K
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
G Y K +R++ M ++GI+P ++T T LAS A+ R G H+ ++K G+
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 356 VGTAIVDMYSGLGEIWEAK-------------------------------KQLKEMGKSA 384
V ++++MY+ G+ AK Q ++M +
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER- 241
Query: 385 SSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND-AACDEFTYSSILKACSLLPSLATCEQI 443
V+WN+ I+GF + A++ FS+M+R+ + D FT +S+L AC+ L L +QI
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 444 HSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAER-------------------------- 477
HS IV + F+ + V ++LI Y++CG E A R
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 478 -------VFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLS 530
+F L DVV+W +MI Y Q+G +AI LF MV G RP + T A+LS
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 531 ACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTA 590
S + G+++ S VK G + + + ++ + +AG + A + +
Sbjct: 422 VASSLASLSHGKQIHGSAVKS-GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 591 PIWRPLFAACRCHSDLKMA-EFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
W + A H + A E ++E D YV + + AGL + +
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 650 MK 651
MK
Sbjct: 541 MK 542
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 162/699 (23%), Positives = 288/699 (41%), Gaps = 153/699 (21%)
Query: 47 SACQLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDSFPDGFIDDGCSNTVPV 106
S C+ F++ P+R +S + +I GY NI G D +G +
Sbjct: 98 STCEFFDQLPQRDSVSWTTMIV-GYKNI---GQYHKAIRVMGDMVKEG---------IEP 144
Query: 107 TCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCG 166
T ++L + VL+ + C+E G++ H+ I K + G+ V+ SL+NMYAKCG
Sbjct: 145 TQFTLTN---------VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 167 D------------------IKSMVAV-------------VKQMPYLDIASCNCLLAGYAK 195
D +M+A+ +QM DI + N +++G+ +
Sbjct: 196 DPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ 255
Query: 196 NALFDQAFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKT 253
+A F K+ D + + P+ +T +++L+ C +L + GKQ+H+ + +
Sbjct: 256 RGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 254 AVSNALLTMYIKCGMME---------------------------------DAESVFEGLV 280
V NAL++MY +CG +E A+++F L
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 281 QRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYM 340
R+V++WTA+I G++QHG Y + + L M G PN YT L+ +SL + G
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 341 FHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQ 400
H +K G V A++ MY+ G I A + + +VSW + I ++
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 401 KTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK-SKFESNVHVG 459
EEA+E F M+ D TY + AC+ + Q + K +
Sbjct: 495 HAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHY 554
Query: 460 SSLIEAYNKCGSWEDAERVFSQL-TAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGI 518
+ +++ + + G ++A+ ++ DVV+W S++ A + + E++++ +
Sbjct: 555 ACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL--L 612
Query: 519 RPTNSTFLAVL----SACS--------------------------------HSGLVQDG- 541
P NS + L SAC H V+DG
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGT 672
Query: 542 ----QKVFESM------VKEYGILPEEAHYSCMVD---------LLGRAGKLEIALIFIS 582
+++ +M +K+ G +P+ A S + D L + KL IA IS
Sbjct: 673 HPEKNEIYMTMKKIWDEIKKMGYVPDTA--SVLHDLEEEVKEQILRHHSEKLAIAFGLIS 730
Query: 583 NLPIKPTAPIWRPLFAACRCHSDLK-MAEFISKQILELD 620
P K T I + L CH+ +K +++ + ++I+ D
Sbjct: 731 T-PDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRD 768
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 299 DYEKPLRLVCLMR------EDGIDPNEYTFTVALASCASLRNSHM--------------- 337
D PL L L+ + ++ + FT L C +++ M
Sbjct: 2 DAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSK 61
Query: 338 -GYMFHAQVIKRGMALGD-FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
GY HA+ + M L F ++ YS G++ ++ + + SVSW I G
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM-DSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
+ + +AI MV+ +FT +++L + + + T +++HS IVK N
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
V V +SL+ Y KCG A+ VF ++ D+ SWN+MI + Q G+ A+ FE+M
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEE 558
I NS ++S + G +F M+++ + P+
Sbjct: 241 RDIVTWNS----MISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 333 bits (853), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 337/672 (50%), Gaps = 84/672 (12%)
Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYL--DIASCNCLLAGYAKNALFDQAFSFFLK 208
D+ ++V+ Y GDI V ++ P D N ++ G++ N A + F K
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 209 LDGIDVQPNHYTYSTMLAICGSLSAIDEGK--QLHAQTMKLQYLSKTAVSNALLTMYIKC 266
+ +P+++T++++LA +L A DE + Q HA +K T+VSNAL+++Y KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGL-ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 267 G----MMEDAESVFEGLVQRNVISWT--------------------------------AI 290
++ A VF+ +++++ SWT A+
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR-- 348
I+G+ G Y++ L +V M GI+ +E+T+ + +CA+ +G HA V++R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRED 317
Query: 349 ---------------------------GMALGDFVG-TAIVDMYSGLGEIWEAKKQLKEM 380
M D V A++ Y G I EAK KEM
Sbjct: 318 FSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 381 GKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATC 440
K + +SW I+G N EE ++ FS M R ++ +S +K+C++L +
Sbjct: 378 -KEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 441 EQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQN 500
+Q H++++K F+S++ G++LI Y KCG E+A +VF + D VSWN++I A Q+
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 501 GRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAH 560
G +A+ ++E+M+ +GIRP T L VL+ACSH+GLV G+K F+SM Y I P H
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 561 YSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELD 620
Y+ ++DLL R+GK A I +LP KPTA IW L + CR H ++++ + ++ L
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLI 616
Query: 621 PDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNKSH 680
P+ Y+ LSNM+A G + RKLM+ + + KE CSWIE+ +++ F + SH
Sbjct: 617 PEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Query: 681 SEMPKVYEKLKQLMQQIEDIGH------------TDNEKEDRVLYHSERLAVGFGLISLP 728
E VY L+ L +++ +G+ +D KED + HSE++AV FGL+ LP
Sbjct: 677 PEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLP 736
Query: 729 AKNKFECSRTLE 740
+ L
Sbjct: 737 PGTTIRIFKNLR 748
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 180/375 (48%), Gaps = 47/375 (12%)
Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
QP + + ++ + S ++ +QL + + +++T +++ Y G + A
Sbjct: 46 QPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT----MVSGYCASGDITLARG 101
Query: 275 VFEG--LVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASL 332
VFE + R+ + + A+I GF + D + L C M+ +G P+ +TF LA A +
Sbjct: 102 VFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALV 161
Query: 333 RNSHMG-YMFHAQVIKRGMALGDFVGTAIVDMYSG--------------LGEIWEAKKQ- 376
+ FHA +K G V A+V +YS EI E ++
Sbjct: 162 ADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERS 221
Query: 377 --------------------LKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRND 416
L+ M + V++NA I+G+ +EA+E +MV +
Sbjct: 222 WTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG 281
Query: 417 AACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAE 476
DEFTY S+++AC+ L +Q+H+ +++ + + + H +SL+ Y KCG +++A
Sbjct: 282 IELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEAR 340
Query: 477 RVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSG 536
+F ++ A D+VSWN+++ Y +G +A ++F++M + I +++ ++S + +G
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL----SWMIMISGLAENG 396
Query: 537 LVQDGQKVFESMVKE 551
++G K+F M +E
Sbjct: 397 FGEEGLKLFSCMKRE 411
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 157/366 (42%), Gaps = 41/366 (11%)
Query: 69 NGYMNIEEK---GISRNGYSTRNDSFPDGFIDDGCSNTVPVTCYSLESL---LDKQFVIE 122
NGY ++ E+ G+ N ++ G+++ G + S LD+
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
V+ C+ L+LG++ HA + + F SLV++Y KCG A+ ++MP D
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 183 IASCNCLLAGY-------------------------------AKNALFDQAFSFFLKLDG 211
+ S N LL+GY A+N ++ F +
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 212 IDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMED 271
+P Y +S + C L A G+Q HAQ +K+ + S + NAL+TMY KCG++E+
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 272 AESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASC-- 329
A VF + + +SW A+I QHG + + + M + GI P+ T L +C
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 330 ASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSW 389
A L + Y + + R D ++D+ G+ +A+ ++ + ++ W
Sbjct: 531 AGLVDQGRKYFDSMETVYRIPPGADHYAR-LIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 390 NAQIAG 395
A ++G
Sbjct: 590 EALLSG 595
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
G++YHA + K +L+ MYAKCG ++ V + MP LD S N L+A +
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQ 495
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
+ +A + ++ ++P+ T T+L C +D+G++ + +M+ Y
Sbjct: 496 HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK-YFDSMETVYRIPPGA 554
Query: 256 SN--ALLTMYIKCGMMEDAESVFEGLVQRNVIS-WTAIINGFKQHGDYE 301
+ L+ + + G DAESV E L + W A+++G + HG+ E
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME 603
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 38/155 (24%)
Query: 424 YSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQ 481
Y++ L+ C L SL +H I+ F+ H+ + LI+ Y K A ++F +
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 482 LTAA---------------------------------DVVSWNSMIKAYSQNGRARKAII 508
++ D V +N+MI +S N AI
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 509 LFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQK 543
LF KM EG +P N TF +VL+ + LV D +K
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLA---LVADDEK 166
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 332 bits (852), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/568 (33%), Positives = 312/568 (54%), Gaps = 27/568 (4%)
Query: 182 DIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
D+ S N ++A A++ +A F + + + P ++ + C SL I GKQ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
Q Y S VS+AL+ MY CG +EDA VF+ + +RN++SWT++I G+ +G+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN-- 157
Query: 302 KPLRLVCLMREDGIDPNE---------YTFTVALASCASLRNSHMGYMFHAQVIKRGMAL 352
L V L ++ +D N+ +++C+ + + H+ VIKRG
Sbjct: 158 -ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 353 GDFVGTAIVDMYS--GLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFS 410
G VG ++D Y+ G G + A+K ++ VS+N+ ++ + ++ + EA E F
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQI-VDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 411 QMVRNDAAC-DEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKC 469
++V+N + T S++L A S +L + IH ++++ E +V VG+S+I+ Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 470 GSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVL 529
G E A + F ++ +V SW +MI Y +G A KA+ LF M+ G+RP TF++VL
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 530 SACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPT 589
+ACSH+GL +G + F +M +G+ P HY CMVDLLGRAG L+ A I + +KP
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 590 APIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKL 649
+ IW L AACR H ++++AE ++ ELD + Y+ LS++YA+AG D E R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 650 MKMKEISKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQLMQQIEDIGHTDN---- 705
MK + + K PG S +E+ +++ F ++ H + K+YE L +L +++ + G+ N
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSV 575
Query: 706 -------EKEDRVLYHSERLAVGFGLIS 726
EKE + HSE+LA+ FG+++
Sbjct: 576 CHDVDEEEKEMTLRVHSEKLAIAFGIMN 603
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 191/445 (42%), Gaps = 65/445 (14%)
Query: 46 YSAC-------QLFNKSPKRAGLSTSDLIFNGYMNIEEKGISRNGYSTRNDS-FPDGFID 97
YS C ++F++ PKR +S + +I +G NG + S F D +D
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMI---------RGYDLNGNALDAVSLFKDLLVD 171
Query: 98 DGCSNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTAS 157
+ + LD ++ V+S CSR L H+ + K V +
Sbjct: 172 ENDDDDAM--------FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 158 LVNMYAKCGDIKSMVA--VVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKL-DGIDV 214
L++ YAK G+ VA + Q+ D S N +++ YA++ + ++AF F +L V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
N T ST+L A+ GK +H Q +++ V +++ MY KCG +E A
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
F+ + +NV SWTA+I G+ HG K L L M + G+ PN TF LA+C
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC----- 398
Query: 335 SHMGYMFHAQVIKRGMAL-GDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQI 393
SH G H + + A+ G F ++ Y + ++ +G+
Sbjct: 399 SHAG--LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDL---------LGR----------- 436
Query: 394 AGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFE 453
AGF + +A+ + R D +SS+L AC + ++ E +R+ +
Sbjct: 437 AGFLQ--------KAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD-S 487
Query: 454 SNVHVGSSLIEAYNKCGSWEDAERV 478
SN L Y G W+D ERV
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERV 512
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 141/291 (48%), Gaps = 10/291 (3%)
Query: 151 DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFF--LK 208
D FV+++L+ MY+ CG ++ V ++P +I S ++ GY N A S F L
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 209 LDGIDVQPNHYTYS----TMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYI 264
+D D + S ++++ C + A + +H+ +K + +V N LL Y
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 265 KCGM--MEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLV-CLMREDGIDPNEYT 321
K G + A +F+ +V ++ +S+ +I++ + Q G + + L++ + N T
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 322 FTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMG 381
+ L + + +G H QVI+ G+ VGT+I+DMY G + A+K M
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM- 348
Query: 382 KSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
K+ + SW A IAG+ + +A+E F M+ + + T+ S+L ACS
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 332 bits (850), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 320/556 (57%), Gaps = 17/556 (3%)
Query: 199 FDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSN 257
F +AF F L+ + TY ++ C L +I K+++ M + + + N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 258 ALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDP 317
+L M++KCGM+ DA +F+ + +RN+ S+ +II+GF G+Y + L +M E+ D
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC 222
Query: 318 NEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQL 377
+TF V L + A L + ++G H +K G+ FV ++DMYS G+I +A+
Sbjct: 223 ETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAF 282
Query: 378 KEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSL 437
+ M + ++V+WN IAG+ + +EEA+ M + + D+FT S +++ + L L
Sbjct: 283 ECMPEK-TTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 438 ATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAY 497
+Q H+ ++++ FES + ++L++ Y+K G + A VF +L +++SWN+++ Y
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 498 SQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPE 557
+ +GR A+ LFEKM+ + P + TFLAVLSAC++SGL + G ++F SM + +GI P
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 558 EAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQIL 617
HY+CM++LLGR G L+ A+ FI P+K T +W L ACR +L++ +++++
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLY 521
Query: 618 ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQN 677
+ P+ YV + NMY G A+A + ++ K +S P C+W+EV ++ + F S +
Sbjct: 522 GMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Query: 678 K--SHSEMPK--VYEKLKQLMQQIEDIGHTDNEK----------EDRV-LYHSERLAVGF 722
+ S++E K +Y+K+ +LM++I + G+++ E+ E+RV YHSE+LA+ +
Sbjct: 582 RFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAY 641
Query: 723 GLISLPAKNKFECSRT 738
GL++ P N + ++
Sbjct: 642 GLVNTPEWNPLQITQN 657
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 242/554 (43%), Gaps = 81/554 (14%)
Query: 127 CSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASC 186
C R + + +R + + +Q++ ++ M+ KCG I + ++P ++ S
Sbjct: 133 CIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSY 192
Query: 187 NCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMK 246
+++G+ + +AF F + +T++ ML L +I GKQLH +K
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252
Query: 247 LQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRL 306
L + T VS L+ MY KCG +EDA FE + ++ ++W +I G+ HG E+ L L
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 307 VCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSG 366
+ MR+ G+ +++T ++ + L + HA +I+ G TA+VD YS
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 367 LGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSS 426
G + A+ ++ + + +SWNA + G+ + + +A++ F +M+ + A + T+ +
Sbjct: 373 WGRVDTARYVFDKLPRK-NIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431
Query: 427 ILKACS----------LLPSLATCEQIHSR-----------------------IVKSKFE 453
+L AC+ + S++ I R I ++ +
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 454 SNVHVGSSLIEAYNKCGSWEDAE--RVFSQ----LTAADVVSWNSMIKAYSQNGRARKAI 507
+ V++ ++L+ N C E+ E RV ++ + + ++ M Y+ G+ +A
Sbjct: 492 TTVNMWAALL---NACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAA 548
Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDG-------------QKVFESM--VKEY 552
+ E + +G+ + + +HS L D QKV E M + EY
Sbjct: 549 GVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEY 608
Query: 553 GILPEEAHYSCMVD-----LLGR--AGKLEIALIFISNLPIKPTAPIWRPL-----FAAC 600
G EE H VD +GR + KL IA ++ P W PL C
Sbjct: 609 GYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVN-------TPEWNPLQITQNHRIC 661
Query: 601 R-CHSDLKMAEFIS 613
+ CH K+ EFIS
Sbjct: 662 KNCH---KVVEFIS 672
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 293/538 (54%), Gaps = 5/538 (0%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
++LG H I ++ D++V +L+ MY G ++ V M D+ S N +++G
Sbjct: 133 MKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
Y +N + A F + V +H T +ML +CG L ++ G+ +H + + K
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 253 TAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMRE 312
V NAL+ MY+KCG M++A VF+ + +R+VI+WT +ING+ + GD E L L LM+
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 313 DGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWE 372
+G+ PN T ++ C + G H +++ + + T+++ MY+ +
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDL 372
Query: 373 AKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACS 432
+ K + W+A IAG +N+ +A+ F +M R D + T +S+L A +
Sbjct: 373 CFRVFSGASKYHTG-PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYA 431
Query: 433 LLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQL----TAADVV 488
L L IH + K+ F S++ + L+ Y+KCG+ E A ++F+ + + DVV
Sbjct: 432 ALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVV 491
Query: 489 SWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESM 548
W ++I Y +G A+ +F +MV G+ P TF + L+ACSHSGLV++G +F M
Sbjct: 492 LWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFM 551
Query: 549 VKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKM 608
++ Y L HY+C+VDLLGRAG+L+ A I+ +P +PT+ +W L AAC H ++++
Sbjct: 552 LEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQL 611
Query: 609 AEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEV 666
E + ++ EL+P++ YV L+N+YA G D E+ R +M+ + K+PG S IE+
Sbjct: 612 GEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 210/469 (44%), Gaps = 9/469 (1%)
Query: 142 LITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQ 201
+IT V G T S+ YA CG I + ++MP + S N ++ Y + L+
Sbjct: 41 VITGGRVSGHILSTLSVT--YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHD 98
Query: 202 AFSFFLKL--DGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNAL 259
A S F+++ +G+ P+ YTY + G L ++ G +H + ++ + V NAL
Sbjct: 99 AISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNAL 158
Query: 260 LTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNE 319
L MY+ G +E A VF+ + R+VISW +I+G+ ++G L + M + +D +
Sbjct: 159 LAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDH 218
Query: 320 YTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKE 379
T L C L++ MG H V ++ + V A+V+MY G + EA+
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 278
Query: 380 MGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLAT 439
M + ++W I G+ + E A+E M + T +S++ C +
Sbjct: 279 MERR-DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Query: 440 CEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQ 499
+ +H V+ + S++ + +SLI Y KC + RVFS + W+++I Q
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397
Query: 500 NGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEA 559
N A+ LF++M E + P +T ++L A + ++ + + K G +
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLD 456
Query: 560 HYSCMVDLLGRAGKLEIALIFISNLPIKPTAP---IWRPLFAACRCHSD 605
+ +V + + G LE A + + K + +W L + H D
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 204/442 (46%), Gaps = 46/442 (10%)
Query: 115 LDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQF-VTASLVNMYAKCGDIKSMVA 173
LD ++ +L C + LE+GR H L+ + + GD+ V +LVNMY KCG +
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL-GDKIEVKNALVNMYLKCGRMDEARF 274
Query: 174 VVKQMPYLDIASCNCLLAGYAKNALFDQAFSF--FLKLDGIDVQPNHYTYSTMLAICGSL 231
V +M D+ + C++ GY ++ + A ++ +G V+PN T ++++++CG
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG--VRPNAVTIASLVSVCGDA 332
Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
+++GK LH ++ Q S + +L++MY KC ++ VF G + + W+AII
Sbjct: 333 LKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
G Q+ L L MR + ++PN T L + A+L + H + K G
Sbjct: 393 AGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 352 LGDFVGTAIVDMYSGLGEIWEAKK---QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEA 408
T +V +YS G + A K ++E KS V W A I+G+ + A++
Sbjct: 453 SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQV 512
Query: 409 FSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNK 468
F +MVR+ +E T++S L ACS HS +V E + + ++E Y
Sbjct: 513 FMEMVRSGVTPNEITFTSALNACS-----------HSGLV----EEGLTLFRFMLEHYK- 556
Query: 469 CGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAV 528
T A + ++ + GR +A L + E PT++ + A+
Sbjct: 557 --------------TLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFE---PTSTVWGAL 599
Query: 529 LSACSHSGLVQDGQ----KVFE 546
L+AC VQ G+ K+FE
Sbjct: 600 LAACVTHENVQLGEMAANKLFE 621
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 337/618 (54%), Gaps = 11/618 (1%)
Query: 133 LELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAG 192
LE G+ H+ I + + + SLV+ Y++ ++ V V+ D+ +++G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 193 YAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSK 252
+ +N +A FL++ + +QPN++TYS +L++C ++ ++D GKQ+H+QT+K+ +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 253 TAVSNALLTMYIKCGMME-DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR 311
T V NAL+ MY+KC E +A VF +V NV+SWT +I G HG + L+ M
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 312 EDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIW 371
+ ++PN T + L +C+ LR+ HA +++R + VG ++VD Y+ ++
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Query: 372 EAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKAC 431
A ++ M K ++++ + + F K E A+ + M + D+ + + A
Sbjct: 480 YAWNVIRSM-KRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 432 SLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWN 491
+ L +L T + +H VKS F V +SL++ Y+KCGS EDA++VF ++ DVVSWN
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 492 SMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKE 551
++ + NG A+ FE+M ++ P + TFL +LSACS+ L G + F+ M K
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Query: 552 YGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEF 611
Y I P+ HY +V +LGRAG+LE A + + +KP A I++ L ACR +L + E
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED 718
Query: 612 ISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIY 671
++ + L L P D A+Y+ L+++Y E+G A++ R LM K +SK+ G S +EV K++
Sbjct: 719 MANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVH 778
Query: 672 RFFSQNKSHSEMPK-VYEKLKQLMQQIEDIGHTDNEKEDRVLYHSERLAVGFGLI-SLP- 728
F S++ + + +Y +++ + ++I+ G E+ +HS + AV +G I + P
Sbjct: 779 SFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNEN-ASFHSAKQAVVYGFIYASPE 837
Query: 729 -----AKNKFECSRTLEY 741
KNK C E+
Sbjct: 838 APVHVVKNKILCKDCHEF 855
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 210/414 (50%), Gaps = 4/414 (0%)
Query: 121 IEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPY 180
I +LS+C +G H + K + + + +L+++Y K I + + +M +
Sbjct: 28 IRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 181 LDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQL 240
+ + +++ + K+ F A S F ++ PN +T+S+++ C L I G ++
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 241 HAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDY 300
H +K + + V ++L +Y KCG ++A +F L + ISWT +I+ +
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 301 EKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAI 360
+ L+ M + G+ PNE+TF V L +S G H+ +I RG+ L + T++
Sbjct: 207 REALQFYSEMVKAGVPPNEFTF-VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSL 265
Query: 361 VDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACD 420
VD YS ++ +A + L G+ + W + ++GF RN + +EA+ F +M +
Sbjct: 266 VDFYSQFSKMEDAVRVLNSSGEQDVFL-WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPN 324
Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWE-DAERVF 479
FTYS+IL CS + SL +QIHS+ +K FE + VG++L++ Y KC + E +A RVF
Sbjct: 325 NFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 480 SQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
+ + +VVSW ++I +G + L +MV + P T VL ACS
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 8/347 (2%)
Query: 326 LASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSAS 385
L+ C S +S +G H VIK G+ + ++ +Y IW A+K EM +
Sbjct: 31 LSFCES-NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHR-T 88
Query: 386 SVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHS 445
+W I+ F ++Q+ A+ F +M+ + +EFT+SS++++C+ L ++ ++H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 446 RIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARK 505
++K+ FE N VGSSL + Y+KCG +++A +FS L AD +SW MI + + R+
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 506 AIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMV 565
A+ + +MV G+ P TF+ +L A S GL + K S + GI + +V
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 566 DLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAAC--RCHSDLKMAEFISKQILELDPDD 623
D + K+E A + + N + +W + + + + F+ + L L P++
Sbjct: 267 DFYSQFSKMEDA-VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 624 AAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIEVYNK 669
LS A L + + +K+ E S + G + +++Y K
Sbjct: 326 FTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK 372
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 123 VLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
VL CS+ + HA + + V G+ V SLV+ YA + V++ M D
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHA 242
+ L+ + + + A S + G ++ + + ++ +L A++ GK LH
Sbjct: 493 NITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHC 552
Query: 243 QTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEK 302
++K + +V N+L+ MY KCG +EDA+ VFE + +V+SW +++G +G
Sbjct: 553 YSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISS 612
Query: 303 PLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKR 348
L MR +P+ TF + L++C++ R + +G + QV+K+
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYF-QVMKK 657
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 317/618 (51%), Gaps = 16/618 (2%)
Query: 136 GRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAK 195
G+ H K+ V V LV MY K V +M D S N ++ GY K
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 196 NALFDQAFSFFLK-LDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTA 254
+ +++ FL+ LD +P+ T S++L CG L + K ++ +K ++ ++
Sbjct: 286 LEMVEESVRMFLENLD--QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 255 VSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDG 314
V N L+ +Y KCG M A VF + ++ +SW +II+G+ Q GD + ++L +M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
+ T+ + ++ L + G H+ IK G+ + V A++DMY+ GE+ ++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
K MG + +V+WN I+ R ++ +QM +++ D T+ L C+ L
Sbjct: 464 KIFSSMG-TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
+ ++IH +++ +ES + +G++LIE Y+KCG E++ RVF +++ DVV+W MI
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGI 554
AY G KA+ F M GI P + F+A++ ACSHSGLV +G FE M Y I
Sbjct: 583 YAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKI 642
Query: 555 LPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISK 614
P HY+C+VDLL R+ K+ A FI +PIKP A IW + ACR D++ AE +S+
Sbjct: 643 DPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSR 702
Query: 615 QILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFF 674
+I+EL+PDD + SN YA RK +K K I+K PG SWIEV ++ F
Sbjct: 703 RIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFS 762
Query: 675 SQNKSHSEMPKVYEKLKQLMQQIEDIGHTDNEKE----------DRVLY--HSERLAVGF 722
S + S + +Y+ L+ L + G+ + +E R L HSERLA+ F
Sbjct: 763 SGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAF 822
Query: 723 GLISLPAKNKFECSRTLE 740
GL++ + + L
Sbjct: 823 GLLNTEPGTPLQVMKNLR 840
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 269/537 (50%), Gaps = 8/537 (1%)
Query: 137 RRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQM-PYLDIASCNCLLAGYAK 195
RR HAL+ + F + L++ Y+ + S ++V +++ P ++ N ++ ++K
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 196 NALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAV 255
N LF +A F+ KL V P+ YT+ +++ C L + G ++ Q + + + S V
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 256 SNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGI 315
NAL+ MY + G++ A VF+ + R+++SW ++I+G+ HG YE+ L + ++ I
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWI 203
Query: 316 DPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKK 375
P+ +T + L + +L G H +K G+ V +V MY +A++
Sbjct: 204 VPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARR 263
Query: 376 QLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLP 435
EM SVS+N I G+ + + EE++ F + + + D T SS+L+AC L
Sbjct: 264 VFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLR 321
Query: 436 SLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIK 495
L+ + I++ ++K+ F V + LI+ Y KCG A VF+ + D VSWNS+I
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 496 AYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGIL 555
Y Q+G +A+ LF+ M++ + + T+L ++S + ++ G+ + + +K GI
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GIC 440
Query: 556 PEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQ 615
+ + + ++D+ + G++ +L S++ T W + +AC D ++ Q
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQ 499
Query: 616 IL--ELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMK-EISKEPGCSWIEVYNK 669
+ E+ PD A VTL + A + E L++ E + G + IE+Y+K
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSK 556
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 205/451 (45%), Gaps = 49/451 (10%)
Query: 120 VIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVVKQMP 179
V VL C L L + + + K + V L+++YAKCGD+ + V M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 180 YLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAIDEGKQ 239
D S N +++GY ++ +A F + ++ Q +H TY ++++ L+ + GK
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKG 429
Query: 240 LHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGD 299
LH+ +K +VSNAL+ MY KCG + D+ +F + + ++W +I+ + GD
Sbjct: 430 LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGD 489
Query: 300 YEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTA 359
+ L++ MR+ + P+ TF V L CASL +G H +++ G +G A
Sbjct: 490 FATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 360 IVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAAC 419
+++MYS G + + + + M + V+W I + + E+A+E F+ M ++
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRR-DVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 420 DEFTYSSILKACSLLPSLATCEQIHSRIVK------SKFESNVHVGSSLIEAYNKCGSWE 473
D + +I+ ACS HS +V K +++ + +IE Y C
Sbjct: 609 DSVVFIAIIYACS-----------HSGLVDEGLACFEKMKTHYKI-DPMIEHY-AC---- 651
Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
++ S++ + KA + M I+P S + +VL AC
Sbjct: 652 -------------------VVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVLRACR 689
Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCM 564
SG ++ ++V +++ + P++ YS +
Sbjct: 690 TSGDMETAERVSRRIIE---LNPDDPGYSIL 717
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 161/341 (47%), Gaps = 38/341 (11%)
Query: 111 LESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKS 170
+E D + ++S +R L+ G+ H+ K+ +C D V+ +L++MYAKCG++
Sbjct: 402 MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGD 461
Query: 171 MVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGS 230
+ + M D + N +++ + F ++ +V P+ T+ L +C S
Sbjct: 462 SLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Query: 231 LSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAI 290
L+A GK++H ++ Y S+ + NAL+ MY KCG +E++ VFE + +R+V++WT +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581
Query: 291 INGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGM 350
I + +G+ EK L M + GI P+ F + +C+ H+ ++ G+
Sbjct: 582 IYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS-----------HSGLVDEGL 630
Query: 351 ALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFF-RNQKTEEAIEAF 409
A +++K K + A + R+QK +A E
Sbjct: 631 A---------------------CFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669
Query: 410 SQM-VRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVK 449
M ++ DA+ ++S+L+AC + T E++ RI++
Sbjct: 670 QAMPIKPDAS----IWASVLRACRTSGDMETAERVSRRIIE 706
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 329 bits (844), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 311/582 (53%), Gaps = 6/582 (1%)
Query: 124 LSYCSREECLELGRRYHALITKTAVCG-DQFVTASLVNMYAKCGDIKSMVAVVKQMPYLD 182
L C + G H + K G D +V +SL+ MY KCG + + + ++ D
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 183 IASCNCLLAGYAKNALFDQAFSFFLKLD-GIDVQPNHYTYSTMLAICGSLSAIDEGKQLH 241
I + + +++G+ KN QA FF ++ DV P+ T T+++ C LS G+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 242 AQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYE 301
++ + + ++ N+LL Y K ++A ++F+ + +++VISW+ +I + Q+G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 302 KPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIV 361
+ L + M +DG +PN T L +CA+ + G H I++G+ V TA+V
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 362 DMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMV-RNDAACD 420
DMY EA + + VSW A I+GF N +IE FS M+ N+ D
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPD 365
Query: 421 EFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFS 480
+L +CS L L + HS ++K F+SN +G+SL+E Y++CGS +A +VF+
Sbjct: 366 AILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 481 QLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEG-IRPTNSTFLAVLSACSHSGLVQ 539
+ D V W S+I Y +G+ KA+ F MV ++P TFL++LSACSH+GL+
Sbjct: 426 GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIH 485
Query: 540 DGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
+G ++F+ MV +Y + P HY+ +VDLLGR G L+ A+ +P PT I L A
Sbjct: 486 EGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGA 545
Query: 600 CRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEISKEP 659
CR H + +MAE ++K++ EL+ + A Y+ +SN+Y G + E+ R +K + I K
Sbjct: 546 CRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGL 605
Query: 660 GCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLKQL-MQQIEDI 700
S IE+ K++RF + ++ H E VY LK+L + ED+
Sbjct: 606 AESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDL 647
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 173/332 (52%), Gaps = 7/332 (2%)
Query: 271 DAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCA 330
DA +F + +R++ W ++ + +E+ L M D P+ +T VAL +C
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 331 SLRNSHMGYMFHAQVIKRGMALGD--FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVS 388
LR + G M H +K+ + LG +VG++++ MY G + EA + E+ K V+
Sbjct: 72 ELREVNYGEMIHG-FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK-PDIVT 129
Query: 389 WNAQIAGFFRNQKTEEAIEAFSQMVR-NDAACDEFTYSSILKACSLLPSLATCEQIHSRI 447
W++ ++GF +N +A+E F +MV +D D T +++ AC+ L + +H +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 448 VKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAI 507
++ F +++ + +SL+ Y K ++++A +F + DV+SW+++I Y QNG A +A+
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 508 ILFEKMVVEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDL 567
++F M+ +G P +T L VL AC+ + ++ G+K E +++ G+ E + +VD+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDM 308
Query: 568 LGRAGKLEIALIFISNLPIKPTAPIWRPLFAA 599
+ E A S +P K W L +
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVS-WVALISG 339
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 160/319 (50%), Gaps = 3/319 (0%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D+ +I ++S C++ LGR H + + D + SL+N YAK K V +
Sbjct: 162 DRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLF 221
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
K + D+ S + ++A Y +N +A F + +PN T +L C + ++
Sbjct: 222 KMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLE 281
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
+G++ H ++ ++ VS AL+ MY+KC E+A +VF + +++V+SW A+I+GF
Sbjct: 282 QGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 296 QHGDYEKPLRLVCLM-REDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGD 354
+G + + +M E+ P+ L SC+ L FH+ VIK G
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNP 401
Query: 355 FVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVR 414
F+G ++V++YS G + A K + +V W + I G+ + K +A+E F+ MV+
Sbjct: 402 FIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVK 460
Query: 415 -NDAACDEFTYSSILKACS 432
++ +E T+ SIL ACS
Sbjct: 461 SSEVKPNEVTFLSILSACS 479
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Query: 474 DAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
DA ++F ++T + WN+++K+ S+ + + + F M + +P N T L AC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 534 HSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIW 593
V G+ + + K+ + + S ++ + + G++ AL L KP W
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTW 130
Query: 594 RPLFAAC-RCHSDLKMAEFISKQILELD--PDDAAVYVTLS 631
+ + + S + EF + ++ D PD + +S
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVS 171
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 346/641 (53%), Gaps = 25/641 (3%)
Query: 101 SNTVPVTCYSLESLLDKQFVIEVLSYCSREECLELGRRYHALITKTA----VCGDQFVTA 156
+N + C + ++L ++L C E + + A + K+ + G + V A
Sbjct: 49 NNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDA 108
Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQP 216
SL KCGDI V M I + N L+A K+ +A + + +V P
Sbjct: 109 SL-----KCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLP 163
Query: 217 NHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQY-LSKTAVSNALLTMYIKCGMMEDAESV 275
+ YT S++ LS E ++ H + L +S V +AL+ MY+K G +A+ V
Sbjct: 164 DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLV 223
Query: 276 FEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNS 335
+ + +++V+ TA+I G+ Q G+ + ++ M + + PNEYT+ L SC +L++
Sbjct: 224 LDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDI 283
Query: 336 HMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAG 395
G + H ++K G T+++ MY + ++ + K + + + VSW + I+G
Sbjct: 284 GNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI-EYPNQVSWTSLISG 342
Query: 396 FFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESN 455
+N + E A+ F +M+R+ + FT SS L+ CS L QIH + K F+ +
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402
Query: 456 VHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV 515
+ GS LI+ Y KCG + A VF L+ DV+S N+MI +Y+QNG R+A+ LFE+M+
Sbjct: 403 KYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN 462
Query: 516 EGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLE 575
G++P + T L+VL AC++S LV++G ++F+S K+ +L + HY+CMVDLLGRAG+LE
Sbjct: 463 LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTND-HYACMVDLLGRAGRLE 521
Query: 576 IALIFISNLPIKPTAPIWRPLFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYA 635
A + + + I P +WR L +AC+ H ++MAE I+++ILE++P D + +SN+YA
Sbjct: 522 EAEMLTTEV-INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYA 580
Query: 636 EAGLQADAEEQRKLMKMKEISKEPGCSWIEVYNKIYRFFSQNK-SHSEMPKVYEKLKQLM 694
G E + MK ++ K P SW+E+ + + F + + SH ++ E L++L+
Sbjct: 581 STGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELI 640
Query: 695 QQIEDIGHTDNE-----------KEDRVLYHSERLAVGFGL 724
++ +D+G+ +++ KE + HSE+LA+ F +
Sbjct: 641 KKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAV 681
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/576 (31%), Positives = 300/576 (52%), Gaps = 1/576 (0%)
Query: 116 DKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSMVAVV 175
D + VL C + + G HA KT++ +V +SL++MY + G I V
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 176 KQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSLSAID 235
+MP+ + + ++ G + + ++F ++ + + YT++ L C L +
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 236 EGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFK 295
GK +H + +++ V+N+L TMY +CG M+D +FE + +R+V+SWT++I +K
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 296 QHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDF 355
+ G K + MR + PNE TF ++CASL G H V+ G+
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 356 VGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRN 415
V +++ MYS G + A + M + +SW+ I G+ + EE + FS M ++
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 416 DAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDA 475
+F +S+L + + Q+H+ + E N V SSLI Y+KCGS ++A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 476 ERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACSHS 535
+F + D+VS +MI Y+++G++++AI LFEK + G RP + TF++VL+AC+HS
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 536 GLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKPTAPIWRP 595
G + G F M + Y + P + HY CMVDLL RAG+L A I+ + K +W
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 596 LFAACRCHSDLKMAEFISKQILELDPDDAAVYVTLSNMYAEAGLQADAEEQRKLMKMKEI 655
L AC+ D++ +++ILELDP A VTL+N+Y+ G +A RK MK K +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Query: 656 SKEPGCSWIEVYNKIYRFFSQNKSHSEMPKVYEKLK 691
KEPG S I++ + + F S ++ H + +Y L+
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 209/427 (48%), Gaps = 9/427 (2%)
Query: 157 SLVNMYAKCGDIKSMVAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGID--V 214
SL+N G++++ V +MP+ DI S ++ Y D+A F + +D V
Sbjct: 49 SLIN----AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104
Query: 215 QPNHYTYSTMLAICGSLSAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAES 274
P+ S +L CG S I G+ LHA +K LS V ++LL MY + G ++ +
Sbjct: 105 SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCR 164
Query: 275 VFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRN 334
VF + RN ++WTAII G G Y++ L M + YTF +AL +CA LR
Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 335 SHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIA 394
G H VI RG V ++ MY+ GE+ + + M + VSW + I
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSLIV 283
Query: 395 GFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFES 454
+ R + +A+E F +M + +E T++S+ AC+ L L EQ+H ++
Sbjct: 284 AYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 455 NVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMV 514
++ V +S+++ Y+ CG+ A +F + D++SW+++I Y Q G + F M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 515 VEGIRPTNSTFLAVLSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKL 574
G +PT+ ++LS + +++ G++V ++ +G+ S ++++ + G +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 575 -EIALIF 580
E ++IF
Sbjct: 463 KEASMIF 469
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 214/467 (45%), Gaps = 43/467 (9%)
Query: 112 ESLLDKQFVIEVLSYCSREECLELGRRYHALITKTAVCGDQFVTASLVNMYAKCGDIKSM 171
E L D L C+ ++ G+ H + V SL MY +CG+++
Sbjct: 204 EELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDG 263
Query: 172 VAVVKQMPYLDIASCNCLLAGYAKNALFDQAFSFFLKLDGIDVQPNHYTYSTMLAICGSL 231
+ + + M D+ S L+ Y + +A F+K+ V PN T+++M + C SL
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 232 SAIDEGKQLHAQTMKLQYLSKTAVSNALLTMYIKCGMMEDAESVFEGLVQRNVISWTAII 291
S + G+QLH + L +VSN+++ MY CG + A +F+G+ R++ISW+ II
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 292 NGFKQHGDYEKPLRLVCLMREDGIDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMA 351
G+ Q G E+ + MR+ G P ++ L+ ++ G HA + G+
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE 443
Query: 352 LGDFVGTAIVDMYSGLGEIWEAKKQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQ 411
V +++++MYS G I EA E + VS A I G+ + K++EAI+ F +
Sbjct: 444 QNSTVRSSLINMYSKCGSIKEASMIFGETDRD-DIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 412 MVRNDAACDEFTYSSILKACSLLPSLATCEQIHSRIVKSKFESNVHVGSSLIEAYN---- 467
++ D T+ S+L AC+ HS + + H + + E YN
Sbjct: 503 SLKVGFRPDSVTFISVLTACT-----------HS----GQLDLGFHYFNMMQETYNMRPA 547
Query: 468 ------------KCGSWEDAERVFSQLT-AADVVSWNSMIKAYSQNG---RARKAIILFE 511
+ G DAE++ ++++ D V W +++ A G R R+A
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRA----A 603
Query: 512 KMVVEGIRPTNSTFLAVLSAC-SHSGLVQDGQKVFESMVKEYGILPE 557
+ ++E + PT +T L L+ S +G +++ V ++M K G++ E
Sbjct: 604 ERILE-LDPTCATALVTLANIYSSTGNLEEAANVRKNM-KAKGVIKE 648
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
Query: 257 NALLTMYIKCGMMEDAESVFEGLVQRNVISWTAIINGFKQHGDYEKPLRLVCLMR--EDG 314
N+ L I G + A VF+ + +++SWT+II + + ++ L L MR +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 315 IDPNEYTFTVALASCASLRNSHMGYMFHAQVIKRGMALGDFVGTAIVDMYSGLGEIWEAK 374
+ P+ +V L +C N G HA +K + +VG++++DMY +G+I ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 375 KQLKEMGKSASSVSWNAQIAGFFRNQKTEEAIEAFSQMVRNDAACDEFTYSSILKACSLL 434
+ EM ++V+W A I G + +E + FS+M R++ D +T++ LKAC+ L
Sbjct: 164 RVFSEM-PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 435 PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCGSWEDAERVFSQLTAADVVSWNSMI 494
+ + IH+ ++ F + + V +SL Y +CG +D +F ++ DVVSW S+I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 495 KAYSQNGRARKAIILFEKMVVEGIRPTNSTFLAVLSACS 533
AY + G+ KA+ F KM + P TF ++ SAC+
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 413 VRNDAACDEFTYSSILKACSLL--PSLATCEQIHSRIVKSKFESNVHVGSSLIEAYNKCG 470
VRN F +SI SLL P +I ++++ KF+ N H+ SLI A G
Sbjct: 5 VRNCGTIQRFCTTSI----SLLQKPVEENIVRISNQVM-VKFDPNSHL-RSLINA----G 54
Query: 471 SWEDAERVFSQLTAADVVSWNSMIKAYSQNGRARKAIILFEKMVV--EGIRPTNSTFLAV 528
+ A +VF ++ D+VSW S+IK Y + +A+ILF M V + P S V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 529 LSACSHSGLVQDGQKVFESMVKEYGILPEEAHYSCMVDLLGRAGKLEIALIFISNLPIKP 588
L AC S + G+ + VK +L S ++D+ R GK++ + S +P +
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKT-SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR- 172
Query: 589 TAPIWRPLFAA 599
A W +
Sbjct: 173 NAVTWTAIITG 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,138,320
Number of Sequences: 539616
Number of extensions: 10769161
Number of successful extensions: 34579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 26417
Number of HSP's gapped (non-prelim): 2347
length of query: 742
length of database: 191,569,459
effective HSP length: 125
effective length of query: 617
effective length of database: 124,117,459
effective search space: 76580472203
effective search space used: 76580472203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)