Query 044171
Match_columns 813
No_of_seqs 421 out of 2918
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 21:12:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044171hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 7E-104 2E-108 922.3 52.9 623 120-810 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4.6E-97 2E-101 868.3 49.7 613 120-810 1-620 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.5E-77 1.2E-81 727.4 43.4 544 126-811 3-607 (926)
4 3afg_A Subtilisin-like serine 100.0 2E-58 6.7E-63 530.7 40.8 336 75-669 60-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 7.7E-57 2.6E-61 501.6 20.8 318 74-669 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 3.7E-54 1.3E-58 492.4 27.6 335 74-669 65-465 (471)
7 1r6v_A Subtilisin-like serine 100.0 1.6E-53 5.5E-58 494.9 25.3 338 75-674 53-444 (671)
8 2p4e_P Proprotein convertase s 100.0 2.4E-55 8.2E-60 506.4 8.8 344 74-668 108-465 (692)
9 1y9z_A Alkaline serine proteas 100.0 3.1E-52 1.1E-56 471.1 26.9 390 126-689 10-436 (441)
10 1dbi_A AK.1 serine protease; h 100.0 2.4E-51 8.2E-56 435.6 21.7 266 122-668 13-279 (280)
11 1thm_A Thermitase; hydrolase(s 100.0 4.1E-51 1.4E-55 433.9 19.4 262 125-668 16-278 (279)
12 1gci_A Subtilisin; hydrolase, 100.0 2.4E-50 8.3E-55 425.1 21.9 253 133-668 16-269 (269)
13 1r0r_E Subtilisin carlsberg; h 100.0 1.8E-50 6.3E-55 427.7 20.3 254 133-668 16-274 (274)
14 1to2_E Subtilisin BPN'; serine 100.0 4.2E-50 1.4E-54 426.3 21.1 256 133-669 16-276 (281)
15 3zxy_A Subtilisin-like protein 100.0 8.2E-51 2.8E-55 433.1 12.2 265 141-668 3-274 (282)
16 4h6x_A Thiazoline oxidase/subt 100.0 7E-52 2.4E-56 455.1 2.2 301 133-668 23-337 (357)
17 2x8j_A Intracellular subtilisi 100.0 9.6E-50 3.3E-54 432.5 18.4 267 127-669 28-311 (327)
18 2ixt_A 36KDA protease; serine 100.0 5.2E-49 1.8E-53 425.2 23.4 289 127-663 13-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 3.2E-49 1.1E-53 428.0 17.9 268 126-669 14-317 (320)
20 4h6w_A N-terminal cyanobactin 100.0 5.4E-50 1.8E-54 432.4 9.8 273 128-668 9-287 (306)
21 3lxu_X Tripeptidyl-peptidase 2 100.0 8.3E-48 2.8E-52 464.0 27.0 412 146-812 214-655 (1354)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 1.2E-48 4.1E-53 429.0 14.8 274 126-669 29-329 (347)
23 1wmd_A Protease; alpha-beta hy 100.0 1.1E-47 3.7E-52 433.7 20.8 293 127-670 8-319 (434)
24 3lpc_A APRB2; protease, subtil 100.0 7.5E-48 2.6E-52 421.8 17.4 298 133-669 24-337 (340)
25 1sh7_A Extracellular subtilisi 100.0 2E-46 6.9E-51 398.0 23.1 233 133-627 21-257 (284)
26 2pwa_A Proteinase K; structure 100.0 1.5E-46 5.2E-51 397.9 16.8 223 142-626 28-259 (279)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 6.3E-46 2.2E-50 394.0 20.7 233 133-627 23-259 (276)
28 2b6n_A Proteinase K; S binding 100.0 7.4E-46 2.5E-50 393.2 20.6 234 133-626 23-260 (278)
29 1p8j_A Furin precursor; prohor 100.0 1.1E-45 3.6E-50 420.9 14.9 296 127-669 25-330 (471)
30 2qtw_B Proprotein convertase s 100.0 5.8E-45 2E-49 409.7 18.5 282 141-668 22-313 (546)
31 2oxa_A Extracellular serine pr 100.0 6.2E-45 2.1E-49 426.7 16.9 150 141-337 66-222 (600)
32 3f7m_A Alkaline serine proteas 100.0 9.2E-45 3.2E-49 385.6 16.0 224 142-627 29-261 (279)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 2.2E-44 7.4E-49 412.8 16.8 284 133-669 46-342 (503)
34 3hjr_A Extracellular serine pr 100.0 1.1E-41 3.8E-46 400.8 24.1 150 141-336 66-221 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 6.4E-25 2.2E-29 251.8 7.9 100 252-356 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 5.1E-22 1.7E-26 217.1 10.3 103 254-356 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 3.3E-09 1.1E-13 120.8 14.7 79 277-356 284-374 (544)
38 3cnq_P Subtilisin BPN'; unclea 98.6 1.4E-07 4.8E-12 79.1 9.3 74 20-121 5-78 (80)
39 2w2n_P Proprotein convertase s 98.6 1.1E-07 3.7E-12 85.3 7.5 77 21-118 35-113 (114)
40 2qtw_A Proprotein convertase s 98.4 6.9E-07 2.4E-11 81.0 7.5 44 74-118 80-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.3 3.5E-06 1.2E-10 69.6 8.8 71 23-118 2-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.9 5.3E-05 1.8E-09 73.7 9.9 87 407-500 83-177 (194)
43 2z30_B TK-subtilisin; thermoco 96.8 0.0014 4.8E-08 51.9 5.4 43 74-118 22-64 (65)
44 2ys4_A Hydrocephalus-inducing 96.5 0.0061 2.1E-07 55.0 7.9 76 725-806 40-115 (122)
45 2ek8_A Aminopeptidase; metallo 95.5 0.031 1E-06 61.9 9.0 78 413-497 105-182 (421)
46 2r39_A FIXG-related protein; s 94.3 0.23 7.7E-06 44.2 9.8 54 728-782 33-86 (118)
47 2e6j_A Hydin protein; PAPD, st 93.5 0.35 1.2E-05 42.3 9.5 92 716-809 14-109 (112)
48 3qbt_B Inositol polyphosphate 93.5 0.51 1.7E-05 43.3 10.7 86 725-810 42-138 (140)
49 3lxu_X Tripeptidyl-peptidase 2 89.6 0.26 8.9E-06 60.9 5.3 25 141-165 32-56 (1354)
50 3qis_A Inositol polyphosphate 89.2 3.4 0.00012 44.3 13.2 86 725-810 45-141 (366)
51 2qsv_A Uncharacterized protein 87.2 4.6 0.00016 39.9 11.8 81 726-809 19-105 (220)
52 3fed_A Glutamate carboxypeptid 85.6 0.54 1.9E-05 55.0 4.6 38 418-461 150-187 (707)
53 3kas_A Transferrin receptor pr 84.7 0.62 2.1E-05 53.9 4.4 39 419-463 128-166 (640)
54 3idu_A Uncharacterized protein 84.7 6 0.00021 35.3 10.0 53 725-780 32-85 (127)
55 3iib_A Peptidase M28; YP_92679 83.1 2.2 7.7E-05 47.1 8.0 82 417-499 123-216 (444)
56 1m1s_A WR4; structural genomic 80.4 4.9 0.00017 35.3 7.5 50 729-780 26-75 (116)
57 2qsv_A Uncharacterized protein 78.9 8.5 0.00029 37.9 9.8 78 717-797 124-206 (220)
58 1msp_A MSP, major sperm protei 78.7 4.2 0.00014 36.3 6.8 50 728-779 27-76 (126)
59 1z9l_A Vesicle-associated memb 77.6 5 0.00017 35.9 6.9 53 726-780 27-79 (128)
60 1row_A SSP-19, MSP-domain prot 77.6 8.1 0.00028 33.5 8.0 49 730-780 19-67 (109)
61 1y9z_A Alkaline serine proteas 74.6 1.7 5.9E-05 48.0 3.7 29 529-570 183-211 (441)
62 3isy_A Bsupi, intracellular pr 74.3 17 0.00059 32.0 9.2 72 725-796 17-106 (120)
63 1wic_A Hypothetical protein ri 72.4 8.4 0.00029 35.6 7.2 51 729-781 38-88 (152)
64 3zyz_A Beta-D-glucoside glucoh 71.2 33 0.0011 40.0 13.6 55 727-782 614-676 (713)
65 2cri_A Vesicle-associated memb 70.6 6.8 0.00023 36.0 6.1 52 727-780 32-83 (147)
66 2x41_A Beta-glucosidase; hydro 63.8 12 0.00041 43.9 7.8 69 712-781 596-678 (721)
67 3abz_A Beta-glucosidase I; gly 62.7 23 0.0008 42.2 10.1 68 710-778 714-795 (845)
68 1w8o_A Bacterial sialidase; 3D 60.3 45 0.0015 37.9 11.9 79 716-797 364-444 (601)
69 2l04_A Major tail protein V; b 57.9 13 0.00045 31.0 4.9 29 755-783 8-36 (91)
70 3hrz_B Cobra venom factor; ser 54.4 44 0.0015 33.5 9.2 66 714-781 86-156 (252)
71 3ndz_E Endoglucanase D; cellot 52.4 1E+02 0.0034 26.4 9.8 57 724-780 13-88 (107)
72 3rfr_A PMOB; membrane, oxidore 50.9 65 0.0022 34.1 9.6 75 726-805 298-405 (419)
73 2l0d_A Cell surface protein; s 50.3 44 0.0015 29.0 7.2 53 725-780 18-72 (114)
74 4ep8_B Urease subunit beta; al 49.8 31 0.0011 28.9 5.7 52 725-776 17-82 (101)
75 3cfu_A Uncharacterized lipopro 42.2 37 0.0013 31.4 5.8 56 728-783 49-116 (159)
76 4ac7_B Urease subunit beta; hy 41.8 45 0.0015 29.2 5.7 52 725-776 23-88 (126)
77 4ubp_B Protein (urease (chain 41.8 45 0.0015 29.2 5.7 52 725-776 23-88 (126)
78 3o0l_A Uncharacterized protein 41.1 73 0.0025 27.5 7.2 52 724-775 36-92 (112)
79 1ifr_A Lamin A/C; immunoglobul 40.0 39 0.0013 29.7 5.3 40 732-772 21-65 (121)
80 1yew_A Particulate methane mon 38.9 1.8E+02 0.0062 30.4 10.7 79 726-805 264-373 (382)
81 1wgl_A TOLL-interacting protei 38.5 22 0.00076 26.9 3.0 35 590-624 3-37 (59)
82 2hr0_B Complement C3 alpha' ch 38.5 1.3E+02 0.0046 36.1 11.6 56 725-780 94-155 (915)
83 4acq_A Alpha-2-macroglobulin; 37.0 1E+02 0.0036 39.1 10.6 66 713-780 772-840 (1451)
84 4fxk_B Complement C4-A alpha c 34.8 41 0.0014 39.7 6.1 57 725-781 167-226 (767)
85 1ufg_A Lamin A, nuclear lamin; 34.2 47 0.0016 30.4 5.0 40 732-772 52-96 (151)
86 2lll_A Lamin-B2; immunoglobuli 33.5 55 0.0019 29.5 5.3 54 718-773 23-81 (139)
87 3sd2_A Putative member of DUF3 32.9 1.8E+02 0.0062 24.5 7.9 66 718-793 35-100 (101)
88 2kq1_A BH0266 protein; solutio 29.3 14 0.00047 32.5 0.5 49 733-781 60-111 (119)
89 3erx_A Pseudoazurin; copper pr 28.8 69 0.0024 28.1 5.1 21 755-775 15-35 (123)
90 3q48_A Chaperone CUPB2; IG fol 28.1 3.1E+02 0.011 27.3 10.4 55 726-780 42-104 (257)
91 2aan_A Auracyanin A; cupredoxi 27.4 35 0.0012 30.5 3.0 36 740-776 15-50 (139)
92 1ni7_A ER75, hypothetical prot 26.5 48 0.0016 30.5 3.7 32 585-617 78-109 (155)
93 1vjj_A Protein-glutamine gluta 26.2 1.4E+02 0.0047 34.4 8.1 57 725-781 495-558 (692)
94 2xg5_A PAPD, chaperone protein 26.1 4.2E+02 0.014 25.5 10.8 54 726-779 14-73 (218)
95 3e9t_A Na/Ca exchange protein; 25.8 1.8E+02 0.0061 24.9 7.2 58 718-777 11-74 (114)
96 3ef4_A Pseudoazurin, blue copp 25.6 89 0.003 27.5 5.2 25 752-776 13-37 (124)
97 1una_A GA unassembled coat pro 25.5 2.8E+02 0.0097 22.9 7.6 66 717-785 4-69 (129)
98 1exg_A EXO-1,4-beta-D-glycanas 25.0 3.2E+02 0.011 23.2 10.1 56 724-779 17-90 (110)
99 3ead_A Na/Ca exchange protein; 24.8 1.3E+02 0.0045 26.8 6.3 58 718-777 13-76 (137)
100 1ex0_A Coagulation factor XIII 24.1 1.5E+02 0.0053 34.2 8.0 57 725-781 530-593 (731)
101 1paz_A Pseudoazurin precursor; 23.8 1E+02 0.0034 27.0 5.2 17 755-771 15-31 (123)
102 2q3z_A Transglutaminase 2; tra 23.1 1.5E+02 0.0052 34.1 7.7 57 725-781 486-550 (687)
103 3g0m_A Cysteine desulfuration 23.1 46 0.0016 30.1 2.8 33 584-617 70-102 (141)
104 4hci_A Cupredoxin 1; structura 23.0 56 0.0019 27.2 3.3 18 758-775 25-42 (100)
105 3tu6_A Pseudoazurin (blue copp 23.0 1.1E+02 0.0036 27.1 5.2 20 755-774 17-36 (127)
106 3prx_B Cobra venom factor; imm 22.2 2.2E+02 0.0075 36.6 9.8 66 713-780 817-887 (1642)
107 1g0d_A Protein-glutamine gamma 21.8 1.4E+02 0.0049 34.2 7.1 57 725-781 485-548 (695)
108 2kut_A Uncharacterized protein 21.8 41 0.0014 29.6 2.1 56 725-781 15-75 (122)
109 3fso_A Integrin beta-4, GP150; 21.7 1.6E+02 0.0055 25.6 6.1 25 753-777 52-77 (123)
110 1klf_A FIMC chaperone, chapero 20.6 5E+02 0.017 24.7 9.9 52 726-777 14-69 (205)
111 1b3i_A PETE protein, protein ( 20.3 1.4E+02 0.0049 24.2 5.3 19 755-773 13-31 (97)
112 1pmy_A Pseudoazurin; electron 20.3 1.1E+02 0.0036 26.8 4.6 16 755-770 15-30 (123)
113 2co7_B SAFB chaperone, putativ 20.2 4.2E+02 0.014 25.6 9.4 53 727-779 27-82 (221)
114 1msc_A Bacteriophage MS2 coat 20.1 1.9E+02 0.0063 24.0 5.5 66 715-783 3-68 (129)
115 3hn9_A Lamin-B1; structural ge 20.1 1.3E+02 0.0045 26.4 5.1 41 732-773 27-71 (123)
116 3icg_A Endoglucanase D; cellul 20.0 3.3E+02 0.011 30.1 9.8 58 724-781 393-469 (515)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=7.1e-104 Score=922.33 Aligned_cols=623 Identities=34% Similarity=0.574 Sum_probs=530.2
Q ss_pred cCCCCcccCCCC--CCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCccc-ccccccccCCCCCCCCCCCce
Q 044171 120 TMHTPEFLGIPV--GVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSIS-KFKGKCTTGNRFPSTACNSKI 196 (813)
Q Consensus 120 ~~~~~~~~~~~~--~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki 196 (813)
++++|++++++. .+|.. +.+|+||+|||||||||++||+|.+.+ +.+++ +|++.|+.+.+|....||+|+
T Consensus 1 Tt~s~~flgl~~~~~~w~~----~~~G~gViVaViDTGId~~Hp~f~d~g---~~p~p~~wkg~c~~g~~f~~~~cN~ki 73 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPA----SGLGQDVIVAVLDSGIWPESASFQDDG---MPEIPKRWKGICKPGTQFNASMCNRKL 73 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHH----HGGGTTCEEEEEESCBCTTSGGGCCTT---CCCCCTTCCCCBCCBTTBCTTSCCSSE
T ss_pred CCCChHHcCCCCchhhHhc----cCCCCCCEEEEEccCCCCCChhhccCC---CCCCccccccccccCccccccccccce
Confidence 356778888863 47776 689999999999999999999999875 44555 999999999999999999999
Q ss_pred EEEEEchhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHH
Q 044171 197 VGAQYFARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMA 276 (813)
Q Consensus 197 ~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~ 276 (813)
+++++|.++..... .+...+...++|.+||||||||||||+...+.+..|...+.+.||||+|+|+++|+++..++..+
T Consensus 74 ig~~~f~~~~~~~~-~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~ 152 (649)
T 3i6s_A 74 IGANYFNKGILAND-PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTS 152 (649)
T ss_dssp EEEEECCHHHHHHC-TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHH
T ss_pred eeeEeccCcccccc-cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHH
Confidence 99999997765433 44445557788999999999999999987777777877788899999999999999998888899
Q ss_pred HHHHHHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeeccc
Q 044171 277 DVVAAVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASIT 356 (813)
Q Consensus 277 ~i~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~ 356 (813)
++++||+||+++|+||||||||.... ..+.+.++.++.+|.++|++||+||||+|+...++++.+||+|+|||++.
T Consensus 153 ~i~~Ai~~A~~~gvdVIn~SlG~~~~----~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~ 228 (649)
T 3i6s_A 153 DLIAAMDQAVADGVDMISISYGYRFI----PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHT 228 (649)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCCCSC----CGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEeCCccCCc----ccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeec
Confidence 99999999999999999999997632 34668899999999999999999999999998889999999999999999
Q ss_pred CccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccc--cceEEEEeeccCC
Q 044171 357 DRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALV--RGKLIICTYSFDF 434 (813)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~--~Gkivl~~~~~~~ 434 (813)
++.|+..+.+++++.+.+.++.+.......+|+++... ...|.. ..+....+ +|||++|.|
T Consensus 229 dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~~------------~~~C~~-~~l~~~~vdl~GkIvlc~~---- 291 (649)
T 3i6s_A 229 DRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNKT------------LSDCSS-EELLSQVENPENTIVICDD---- 291 (649)
T ss_dssp SCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCTT------------TTTCCC-HHHHTTSSSGGGCEEEECC----
T ss_pred ccceeeEEEeCCCcEEeeeecccCcccCcceeeEeccc------------cccccc-ccccccccccCCcEEEEeC----
Confidence 99999999999999999999987765567889988651 356763 34555556 999999998
Q ss_pred CCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeee
Q 044171 435 ENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHAR 514 (813)
Q Consensus 435 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 514 (813)
|.+.+.+|..+++++|+.|+|++|+.. ......+.+|.+++ ..++++.|+.|+++.... +
T Consensus 292 --g~~~~~~k~~~~~~~Ga~g~i~~n~~~------~~~~~~~~~P~~~v-~~~~g~~i~~yi~s~~~~-----------~ 351 (649)
T 3i6s_A 292 --NGDFSDQMRIITRARLKAAIFISEDPG------VFRSATFPNPGVVV-NKKEGKQVINYVKNSVTP-----------T 351 (649)
T ss_dssp --CSCHHHHHHHHHHHTCSEEEEECCCGG------GGGCCCCCSCEEEE-CHHHHHHHHHHHHTCSSC-----------E
T ss_pred --CCccHHHHHHHHHhcCceEEEEecCcc------ccccccCcCCEEEE-cHHHHHHHHHHHhcCCCc-----------e
Confidence 678899999999999999999998752 23345678999888 578899999999987532 3
Q ss_pred EEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCC----CCCcceeeeccC
Q 044171 515 ARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNL----KGRNFALLSGTS 590 (813)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~----~~~~y~~~sGTS 590 (813)
+++....+.......+.++.||||||+.+ .++++||||+|||++|+|+++......... ....|..+||||
T Consensus 352 a~i~~~~t~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTS 426 (649)
T 3i6s_A 352 ATITFQETYLDTKPAPVVAASSARGPSRS-----YLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTS 426 (649)
T ss_dssp EEEEEEEEECCCSSCCEECTTSCCSSCTT-----CTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHH
T ss_pred EEEeecceeeccCCCCcccccCCCCCCCC-----CCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccc
Confidence 44444444445567899999999999986 468999999999999999997643211000 125899999999
Q ss_pred ChhhHHHHHHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCCC
Q 044171 591 MATPHIAGVAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDPG 670 (813)
Q Consensus 591 MAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~~ 670 (813)
||||||||++|||||+||+|+|++||++||+||.++++.+.|+.+.. ...+++++.||+|+||+.+|++|+
T Consensus 427 MAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~---------~~~~a~~~~~GaG~vn~~~A~~pG 497 (649)
T 3i6s_A 427 MAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSD---------NNKAATPLDMGAGHVDPNRALDPG 497 (649)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETT---------TSSBCCHHHHTTCBCCHHHHTCCS
T ss_pred cccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccc---------cCCcCCcCCCCeeeeCHHHhcCcc
Confidence 99999999999999999999999999999999999999998887653 456788999999999999999999
Q ss_pred eeeecchhhHHHhhccCCCCCccceeeecccC----ccCCCCCCCCCCCCCcEEEec-cCcc-----EEEEEEEEecCCC
Q 044171 671 LIFNAHFQEYVQFLCAVPGVDDDYVRRVTGYG----CPTENQGWCSDLNTPSITISN-LVGS-----RKVIRRVRNVSSA 740 (813)
Q Consensus 671 lv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~n~~s~~~~~-~~~~-----~~~~~tv~N~~~~ 740 (813)
||||...+||+.|||++++ +..+|+.+++.. |.. .+.+||||||++.. ..+. ++|+|||||+|..
T Consensus 498 Lvyd~~~~dy~~flc~~~y-~~~~i~~~~~~~~~~~C~~----~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~ 572 (649)
T 3i6s_A 498 LVYDATPQDYVNLLCSLNF-TEEQFKTIARSSASHNCSN----PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKG 572 (649)
T ss_dssp EECCCCHHHHHHHHHTTCC-CHHHHHHHHTTTSCC-CCC----CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--
T ss_pred ccccCCchhHHHhhhcCCC-CcccceeeecCCCcCCCCC----chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCC
Confidence 9999999999999999987 888888887754 864 46799999999987 5666 8999999999998
Q ss_pred CeeEEEEEeCCCCcEEEEecCeEEEe-cCcEEEEEEEEEEecC-CCCeEEEEEEEEeC-CcceEEEeEEEEEe
Q 044171 741 NETYTVTVKEPSGVKVSVSPQVFKIR-GLASRELKIVLKATNS-TRAYSFGAMVLQGN-NNHIIRIPIAVYVS 810 (813)
Q Consensus 741 ~~ty~~~~~~~~g~~v~~~~~~~~v~-~g~~~~~~vt~~~~~~-~~~~~~G~i~~~~~-~~~~l~~P~~~~~~ 810 (813)
..+|++.++.|.|++|+++|++|++. .||+++|+|||+.... ...+.+|+|+|+++ +.|.+|+|++++..
T Consensus 573 ~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 573 AATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 99999999999999999999999996 8999999999998744 45688999999974 68999999999864
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=4.6e-97 Score=868.32 Aligned_cols=613 Identities=35% Similarity=0.582 Sum_probs=485.1
Q ss_pred cCCCCcccCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCccc-ccccccccCCCCCCCCCCCceEE
Q 044171 120 TMHTPEFLGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSIS-KFKGKCTTGNRFPSTACNSKIVG 198 (813)
Q Consensus 120 ~~~~~~~~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~n~ki~g 198 (813)
++++|+++|++...|.. ..+|+||+|||||||||++||+|.+.+. .+++ +|++.|+.+.+| .||+|+++
T Consensus 1 tt~s~~flGl~~~~~~~----~~~G~gViVgViDTGId~~Hp~f~d~g~---~~~~~~w~g~~~~~~~~---~~n~k~ig 70 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRR----SQVESNIVVGVLDTGIWPESPSFDDEGF---SPPPPKWKGTCETSNNF---RCNRKIIG 70 (621)
T ss_dssp CCSHHHHTTCCTTCCCC----HHHHTTCEEEEEESCBCTTSGGGCCTTC---CCCCTTCCCCBCCSSSC---CCCSSEEE
T ss_pred CCCChhHcCCCcccccc----CCCCCCCEEEEEecCCCCCChhhcCCCC---CCcccccccccccCCCc---ccCcceee
Confidence 46788999998877776 5789999999999999999999998754 3344 999999998877 59999999
Q ss_pred EEEchhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHH
Q 044171 199 AQYFARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADV 278 (813)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i 278 (813)
+++|..+. .....+...|+|++||||||||||||+...+....|...+.++||||+|+|++||+|++.++..+++
T Consensus 71 ~~~~~~~~-----~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di 145 (621)
T 3vta_A 71 ARSYHIGR-----PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDI 145 (621)
T ss_dssp EEECCCSS-----SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHH
T ss_pred eeecccCC-----ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHH
Confidence 99997652 1223344678899999999999999998777677777777889999999999999999988889999
Q ss_pred HHHHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCc
Q 044171 279 VAAVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDR 358 (813)
Q Consensus 279 ~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~ 358 (813)
++||++|+++|+||||||||+.... ....+.++.++.+|.++||++|+||||+|+...++++.+||+++|++++.++
T Consensus 146 ~~a~~~a~~~g~dVin~SlG~~~~~---~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~ 222 (621)
T 3vta_A 146 LAAYDDAIADGVDIISLSVGGANPR---HYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDR 222 (621)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCGG---GGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSE
T ss_pred HHHHHHHHHhCCCEEEecCCCCCCC---CcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccc
Confidence 9999999999999999999976533 3456788899999999999999999999999999999999999999999999
Q ss_pred cccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCc
Q 044171 359 KYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDD 438 (813)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~ 438 (813)
.+...+.++++..+.+.++... ....++++...+....... ......|. ...+....++|||++|.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~v~gkivl~~~~------- 290 (621)
T 3vta_A 223 KFVTQVQIGNGQSFQGVSINTF--DNQYYPLVSGRDIPNTGFD--KSTSRFCT-DKSVNPNLLKGKIVVCEAS------- 290 (621)
T ss_dssp EEEEEEEETTSCEEEEBCCCCS--CCEEECEEETTTSCCTTCC--HHHHTTTC-TTCSCGGGTTTSEEECSSC-------
T ss_pred cceeeEEeccCceeeeeecccC--CCccccccccccccccccc--cccccccc-ccccccccccceEEEEecC-------
Confidence 9999999999999988876543 3556777766554432221 12234454 4567788999999999874
Q ss_pred hhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEc
Q 044171 439 ATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARIL 518 (813)
Q Consensus 439 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 518 (813)
+..+..+....|+.++|++++... ....+.+|...+ ...++..++.|+....... +.+.
T Consensus 291 --~~~~~~~~~~~Ga~gvi~~~~~~~-------~~~~~~lP~~~v-~~~~g~~i~~~~~~~~~~~-----------a~~~ 349 (621)
T 3vta_A 291 --FGPHEFFKSLDGAAGVLMTSNTRD-------YADSYPLPSSVL-DPNDLLATLRYIYSIRSPG-----------ATIF 349 (621)
T ss_dssp --CCHHHHHHHHTTCSEEEEECSCCS-------SCCCCSSSEEEE-CHHHHHHHHHHHHHHSSCC-----------EEEC
T ss_pred --CChhHHhhhhcceeEEEEEecCCC-------cccccccceEEE-CHHHHHHHHHHHhccCCcc-----------eEEe
Confidence 224566778889999999987651 123456888877 5678889999887764321 2222
Q ss_pred cCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHH
Q 044171 519 DGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAG 598 (813)
Q Consensus 519 ~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG 598 (813)
. .........+.++.||||||+.. .++++||||+|||++|+|+++..........+..|..|||||||||||||
T Consensus 350 ~-~~~~~~~~~~~va~FSSrGP~~~-----~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAG 423 (621)
T 3vta_A 350 K-STTILNASAPVVVSFSSRGPNRA-----TKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITG 423 (621)
T ss_dssp C-CEEEECTTCCCBCTTSCCCSCTT-----CTTSCSCCEEEECSSEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHH
T ss_pred c-ceEeccCCCCceeeecCCCCCCC-----CCCeeccccccCCcceEeecCccccccCcCCCCcceEecCccccchhhhh
Confidence 1 12234556789999999999875 35899999999999999999865433333345689999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCCCeeeecchh
Q 044171 599 VAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDPGLIFNAHFQ 678 (813)
Q Consensus 599 ~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~~lv~~~~~~ 678 (813)
++|||||+||+|+|++||++||+||++++..+ .++.+++||+|+||+.+|++|+||||+...
T Consensus 424 vaALl~q~~P~~spa~IksaLmtTA~~~~~~~------------------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~ 485 (621)
T 3vta_A 424 IATYVKTYNPTWSPAAIKSALMTTASPMNARF------------------NPQAEFAYGSGHVNPLKAVRPGLVYDANES 485 (621)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT------------------CTTTHHHHTTCBCCHHHHSCCSEECCCCGG
T ss_pred HHHHHHHHCCCCCHHHHHHHHHhcCCcccccC------------------CCCCchhcCCCccCHHHhcCCCeEeecccc
Confidence 99999999999999999999999999876543 355678999999999999999999999999
Q ss_pred hHHHhhccCCCCCccceeeecc--cCccCCCCCCCCCCCCCcEEEe---ccCccEEEEEEEEecCCCCeeEEEEEeCCCC
Q 044171 679 EYVQFLCAVPGVDDDYVRRVTG--YGCPTENQGWCSDLNTPSITIS---NLVGSRKVIRRVRNVSSANETYTVTVKEPSG 753 (813)
Q Consensus 679 ~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~n~~s~~~~---~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g 753 (813)
||+.|||++++ +..+++..++ ..|.........+||||||++. +...+++++|||||+|....||+++++.|.|
T Consensus 486 dy~~~lc~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~g 564 (621)
T 3vta_A 486 DYVKFLCGQGY-NTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQG 564 (621)
T ss_dssp GCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSS
T ss_pred hhhhhhcccCC-CchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCC
Confidence 99999999976 7788877775 4566555667889999999986 4456789999999999999999999999999
Q ss_pred cEEEEecCeEEEe-cCcEEEEEEEEEEecCCCCeEEEEEEEEeCCcceEEEeEEEEEe
Q 044171 754 VKVSVSPQVFKIR-GLASRELKIVLKATNSTRAYSFGAMVLQGNNNHIIRIPIAVYVS 810 (813)
Q Consensus 754 ~~v~~~~~~~~v~-~g~~~~~~vt~~~~~~~~~~~~G~i~~~~~~~~~l~~P~~~~~~ 810 (813)
++|+++|++|+++ .||+++|+|||+.. ..+.+++|+|+|+ +++|.+|+|++|++.
T Consensus 565 v~v~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~g~l~w~-d~~h~Vr~Pi~v~~~ 620 (621)
T 3vta_A 565 LTISVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVSASLVWS-DGVHYVRSPITITSL 620 (621)
T ss_dssp EEEEEESSEEEECSTTCEEEEEEEEEEC-CCSSEEEEEEEEE-CSSCCCEEEEEEECC
T ss_pred cEEEEecCEEEEcCCCcEEEEEEEEEec-CCCceEEEEEEEE-cCCEEEEeCEEEEEe
Confidence 9999999999996 68999999999864 3567999999997 578999999999863
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.5e-77 Score=727.37 Aligned_cols=544 Identities=19% Similarity=0.291 Sum_probs=405.3
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCC----------CCCCCCCCCc
Q 044171 126 FLGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGN----------RFPSTACNSK 195 (813)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~n~k 195 (813)
+++++. +|.. +++|+||+|||||||||++||+|.... .|++.|..+. .....+||+|
T Consensus 3 ~i~~~~-~w~~----~~~G~GV~VaVIDTGId~~Hp~f~~~~--------~~~~~~~~~~~~~~~~~~~g~~~g~~~n~K 69 (926)
T 1xf1_A 3 PSQVKT-LQEK----AGKGAGTVVAVIDAGFDKNHEAWRLTD--------KTKARYQSKEDLEKAKKEHGITYGEWVNDK 69 (926)
T ss_dssp TTCCHH-HHHH----HCSCTTCEEEEEESCCTTCCCCCSCCS--------CCCSSCCHHHHHHHHHHTTTCCCCBCCSSS
T ss_pred ccccHH-HHhc----cCCCCCcEEEEEecCCCCCCHhHcCCC--------CCcccccchhhhcccccccCcccccccCcc
Confidence 455554 7876 689999999999999999999999653 4555554321 1123489999
Q ss_pred eEEEEEchhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC--C
Q 044171 196 IVGAQYFARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG--G 273 (813)
Q Consensus 196 i~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g--~ 273 (813)
++++++|.++ ....|++||||||||||||+...+.. +.+.+.||||+|+|+++|++++.+ +
T Consensus 70 ii~~~~~~~~-------------~~~~D~~gHGThVAgiiAg~~~~~~~----~~~~~~GvAP~A~l~~~kv~~~~g~~~ 132 (926)
T 1xf1_A 70 VAYYHDYSKD-------------GKTAVDQEHGTHVSGILSGNAPSETK----EPYRLEGAMPEAQLLLMRVEIVNGLAD 132 (926)
T ss_dssp CCEEEESCCC-------------SCCCCSSTTTTHHHHSSCCCCCCCCS----CSCCTTTTCTTSEEEEEECCCCSCHHH
T ss_pred cceeeccccC-------------CCCCCCCCcHHHHHHHHhCCCccCcc----cCCceEEECCCCEEEEEEeecCCCCCC
Confidence 9999999753 11228899999999999998643221 124678999999999999998766 4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC---------------
Q 044171 274 YMADVVAAVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS--------------- 338 (813)
Q Consensus 274 ~~~~i~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~--------------- 338 (813)
..+++++||+||+++|+||||||||+..... ..+.+.++.++..|.++|++||+||||+|...
T Consensus 133 ~~~~i~~Ai~~Ai~~gvdVIn~SlG~~~~~~--~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~t 210 (926)
T 1xf1_A 133 YARNYAQAIRDAINLGAKVINMSFGNAALAY--ANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGV 210 (926)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCSSCCCTT--CCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBC
T ss_pred cHHHHHHHHHHHHHhCCcEEEECCCCCCCCc--cccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcce
Confidence 5578999999999999999999999764321 22456788899999999999999999999632
Q ss_pred CCCCCCCCceEEEeecccCccccceeee-cCCcEEEeeecC--CCCCCCceeeeEEecccccCcccccccccccCCCCCC
Q 044171 339 SSILSFSPWITSIAASITDRKYNNTIKL-ANGHSFSGIGLA--PPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPEL 415 (813)
Q Consensus 339 ~~~~~~~~~vitVgA~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 415 (813)
...|+.+||+|+|||++.++.+...+.+ +++....+.++. ........+++++... .|. ...
T Consensus 211 v~~PA~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------------g~~-~~~ 275 (926)
T 1xf1_A 211 VGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------------GTK-EDD 275 (926)
T ss_dssp CCSCTTTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------------SCS-TTT
T ss_pred ecCcccCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------------CCC-ccc
Confidence 2234568999999999999988887776 444333333321 1112346788887643 243 223
Q ss_pred cCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHH
Q 044171 416 FIPALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEY 495 (813)
Q Consensus 416 ~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~ 495 (813)
+ .+++|||++|.| |.|.+.+|..+++.+|+.++|++|+..+. ..........+|...+ +.+++..|.+
T Consensus 276 ~--~~v~Gkivl~~r------g~~~~~~k~~~~~~~Ga~gvi~~n~~~~~--~~~~~~~~~~iP~~~i-~~~~g~~l~~- 343 (926)
T 1xf1_A 276 F--KDVKGKIALIER------GDIDFKDKIAKAKKAGAVGVLIYDNQDKG--FPIELPNVDQMPAAFI-SRKDGLLLKD- 343 (926)
T ss_dssp T--TTCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSTTC--CCEECCCSTTCCEEEE-CHHHHHHHHH-
T ss_pred h--hhcCCeEEEEEC------CCCCHHHHHHHHHhCCCcEEEEEecCCCC--cccccCccccccEEEE-eHHHHHHHHh-
Confidence 3 579999999988 67889999999999999999999986521 1111234456888877 5566766663
Q ss_pred HhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCC
Q 044171 496 YNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGD 575 (813)
Q Consensus 496 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~ 575 (813)
.. ...+.|.. ..........+.++.||||||+.+ +++||||+|||++|+|+++
T Consensus 344 ---~~-----~~ti~~~~------~~~~~~~~~~~~~a~FSSrGp~~~-------~~lKPDI~APG~~I~sa~~------ 396 (926)
T 1xf1_A 344 ---NP-----QKTITFNA------TPKVLPTASGTKLSRFSSWGLTAD-------GNIKPDIAAPGQDILSSVA------ 396 (926)
T ss_dssp ---CS-----SCEEEECS------SCEEEECSSCSBCCTTSCCCBCTT-------SCBSCCEEEECCCEEESSS------
T ss_pred ---CC-----ceEEEecc------cceecccCCcceeccccCCCCCCC-------CccCceEECCCCCEEeecc------
Confidence 11 12233322 222233455679999999999976 7999999999999999985
Q ss_pred CCCCCCcceeeeccCChhhHHHHHHHHHHH----hCCCCCHHH----HHHHHHccccccCCCCCcccccCCCCCcccccc
Q 044171 576 PNLKGRNFALLSGTSMATPHIAGVAALIKQ----RHPKWSPAA----ITSAMMTSAEVTDHSGSPILAQDYSDSPILEHV 647 (813)
Q Consensus 576 ~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~p~~s~~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~ 647 (813)
++.|..+||||||||||||++|||+| +||+|+|+| ||++||+||+++...+ .
T Consensus 397 ----~~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~----------------~ 456 (926)
T 1xf1_A 397 ----NNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSATALYDED----------------E 456 (926)
T ss_dssp ----CSSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG----------------G
T ss_pred ----CCcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhcCCCcccCC----------------C
Confidence 34899999999999999999999964 699999997 9999999999874321 1
Q ss_pred ccCCCCCccCccccCccCcCCCCeeeecchhhHHHhhccCCCCCccceeeecccCccCCCCCCCCCCCCCcEEEeccCcc
Q 044171 648 LVHATPFDFGAGFINPARAIDPGLIFNAHFQEYVQFLCAVPGVDDDYVRRVTGYGCPTENQGWCSDLNTPSITISNLVGS 727 (813)
Q Consensus 648 ~~~~~~~~~GaG~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~n~~s~~~~~~~~~ 727 (813)
...+++++||+|+||+.+|+++.+ |+|..++ +.++|.+.++.++
T Consensus 457 ~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~-------------------------~~~~i~l~~~~~~ 500 (926)
T 1xf1_A 457 KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDN-------------------------TSSKVHLNNVSDK 500 (926)
T ss_dssp TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSS-------------------------SCSCEEEEEECSE
T ss_pred CccCChhccCCCccCHHHhcCCCe-----------EEEcCCC-------------------------CcceeeccccCcc
Confidence 224567899999999999999855 4565432 1124566666678
Q ss_pred EEEEEEEEecCCCC--eeEEEEEeC--CCCcEEEEe--------cCeEEEecCcEEEEEEEEEEec---------CCCCe
Q 044171 728 RKVIRRVRNVSSAN--ETYTVTVKE--PSGVKVSVS--------PQVFKIRGLASRELKIVLKATN---------STRAY 786 (813)
Q Consensus 728 ~~~~~tv~N~~~~~--~ty~~~~~~--~~g~~v~~~--------~~~~~v~~g~~~~~~vt~~~~~---------~~~~~ 786 (813)
.+++|||+|+|+++ .+|++.+.. +.+..+++. +++|||+||++++|+|||+++. ..+.+
T Consensus 501 ~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~ 580 (926)
T 1xf1_A 501 FEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYF 580 (926)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEE
T ss_pred EEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcE
Confidence 88999999999865 556666554 556666654 4578999999999999999862 13458
Q ss_pred EEEEEEEEeCC-cc-eEEEeEEEEEec
Q 044171 787 SFGAMVLQGNN-NH-IIRIPIAVYVST 811 (813)
Q Consensus 787 ~~G~i~~~~~~-~~-~l~~P~~~~~~~ 811 (813)
++|+|+|++++ .+ .||+||+++.++
T Consensus 581 ~~G~i~~~~~~~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 581 LEGFVRFKQDPTKEELMSIPYIGFRGD 607 (926)
T ss_dssp EEEEEEEESSTTSCCCEEEEEEEEESC
T ss_pred EEEEEEEEeCCCCCCEEEeeeEEEecC
Confidence 99999999643 34 599999998865
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=2e-58 Score=530.72 Aligned_cols=336 Identities=33% Similarity=0.572 Sum_probs=269.7
Q ss_pred eeeEEEeccceeEEEEEeCHHHHHHHH-----------hcCcCeeEEEeCccceeccCC-----CCcccCCCCCCCCCCC
Q 044171 75 YTKLYSYTHLLSGFAIHIESEEAVSTL-----------QNAKGVRIIHEDIKMEKLTMH-----TPEFLGIPVGVWPTLG 138 (813)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~~~~~~~L-----------~~~p~V~~v~~~~~~~~~~~~-----~~~~~~~~~~~w~~~~ 138 (813)
.++.++|. .++||+++++.+++ ++| +++|+|++|+++..+++.... ....++++. +|+.
T Consensus 60 ~~v~~~~~-~~~g~~~~l~~~~~-~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 134 (539)
T 3afg_A 60 AKIKYNYH-IIPALAVKIKVKDL-LIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATN-MWNL-- 134 (539)
T ss_dssp CEEEEECS-SSSEEEEEEEHHHH-HHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSC-CBCC--
T ss_pred CeEEEEee-eeeEEEEEeCHHHH-HHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHh-HHhc--
Confidence 57788886 79999999999998 999 899999999999988764321 122334333 6765
Q ss_pred CCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCC
Q 044171 139 GAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDY 218 (813)
Q Consensus 139 ~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 218 (813)
+++|+||+|||||||||++||+|.+ ++++.++|.++ .
T Consensus 135 --g~~G~gv~VaViDtGid~~Hpdl~~-----------------------------~i~~~~d~~~~------------~ 171 (539)
T 3afg_A 135 --GYDGSGITIGIIDTGIDASHPDLQG-----------------------------KVIGWVDFVNG------------K 171 (539)
T ss_dssp --SCCCTTCEEEEEESBCCTTSGGGTT-----------------------------TEEEEEETTTC------------C
T ss_pred --CCCCCCcEEEEEecCCCCCChHHhC-----------------------------CEeeeEECCCC------------C
Confidence 7899999999999999999999975 46666777543 1
Q ss_pred CCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC----CCcEE
Q 044171 219 ASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED----GVDII 293 (813)
Q Consensus 219 ~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~~VI 293 (813)
..+.|++||||||||||+|.... ..+.+.||||+|+|+.+|++++.+ +..+++++||+||+++ |++||
T Consensus 172 ~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vi 244 (539)
T 3afg_A 172 TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVI 244 (539)
T ss_dssp SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEE
Confidence 34678899999999999987432 123468999999999999999877 7889999999999986 89999
Q ss_pred EEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCC--CCCCCCCceEEEeecccCccccceeeecCCcE
Q 044171 294 SLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSS--SILSFSPWITSIAASITDRKYNNTIKLANGHS 371 (813)
Q Consensus 294 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~ 371 (813)
|||||...... ..+.+..+++++.++|++||+||||+|.... ..|+..+++|+|||++.+
T Consensus 245 n~SlG~~~~~~----~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~-------------- 306 (539)
T 3afg_A 245 NLSLGSSQSSD----GTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY-------------- 306 (539)
T ss_dssp EECCCCCSCCC----SCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT--------------
T ss_pred EeCCCCCCCCc----cchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC--------------
Confidence 99999765321 2367888889999999999999999997543 457788999999984310
Q ss_pred EEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhc
Q 044171 372 FSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKI 451 (813)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~ 451 (813)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCe
Q 044171 452 EAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPV 531 (813)
Q Consensus 452 Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 531 (813)
+.
T Consensus 307 ------------------------------------------------------------------------------~~ 308 (539)
T 3afg_A 307 ------------------------------------------------------------------------------DV 308 (539)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------cc
Confidence 13
Q ss_pred eeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCC
Q 044171 532 VASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWS 611 (813)
Q Consensus 532 ~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s 611 (813)
++.||||||+.+ +++||||+|||++|+++++...... ......|..++|||||||||||++|||+|++|+|+
T Consensus 309 ~a~fSs~Gp~~~-------~~~kpdi~APG~~I~s~~~~~~~~~-~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s 380 (539)
T 3afg_A 309 ITDFSSRGPTAD-------NRLKPEVVAPGNWIIAARASGTSMG-QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWT 380 (539)
T ss_dssp BCSSSCCCCCTT-------CBCCCSEEEECSSEEEECCTTCCCS-EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred cccccCCCCCCC-------CCCcccEecCcCCEEeeccCCCCCC-CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCC
Confidence 789999999986 7999999999999999986532100 00123699999999999999999999999999999
Q ss_pred HHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 612 PAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 612 ~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
+++||++|++||+++...+ .+++.||+|++|+.+|++.
T Consensus 381 ~~~vk~~L~~tA~~~~~~~--------------------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 381 PDKVKTALIETADIVKPDE--------------------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp HHHHHHHHHHHSBCSSGGG--------------------CSBTTTBTCBCCHHHHHTG
T ss_pred HHHHHHHHHhhCccCCCCC--------------------CCccCccCCccCHHHHhhh
Confidence 9999999999998764211 2345899999999999985
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=7.7e-57 Score=501.61 Aligned_cols=318 Identities=27% Similarity=0.439 Sum_probs=258.2
Q ss_pred ceeeEEEeccceeEEEEEeCHHHHHHHHhcCcCeeEEEeCccceeccCCC-----------C-----cccCCCCCCCCCC
Q 044171 74 SYTKLYSYTHLLSGFAIHIESEEAVSTLQNAKGVRIIHEDIKMEKLTMHT-----------P-----EFLGIPVGVWPTL 137 (813)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~-----------~-----~~~~~~~~~w~~~ 137 (813)
+.++.++|. .+++|+++++.+++ ++|+++|+|++|+++..+++..... . +.++.+. +|..
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~-~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~-~w~~- 98 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAV-GKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPS-VWSI- 98 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGH-HHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGG-GGGT-
T ss_pred CCEEEEEec-cCCEEEEEECHHHH-HHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHH-HHhh-
Confidence 457788887 58999999999888 9999999999999999887643211 0 1223332 5665
Q ss_pred CCCCCCCCC--cEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCC
Q 044171 138 GGAEFSGEG--VVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNST 215 (813)
Q Consensus 138 ~~~~~~G~g--v~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 215 (813)
+ +|+| |+|||||||||++||+|.++ +..+++|..+.. .
T Consensus 99 ---~-~G~g~~v~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~~-----~-- 138 (395)
T 2z2z_A 99 ---T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTLRGKV-----S-- 138 (395)
T ss_dssp ---C-SSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECGGGCC-----B--
T ss_pred ---c-CCCCCcEEEEEEcCCCCCCChhHhhc-----------------------------cccCccccCCcc-----c--
Confidence 4 9999 99999999999999999963 445555554310 0
Q ss_pred CCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC------
Q 044171 216 RDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED------ 288 (813)
Q Consensus 216 ~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------ 288 (813)
.+..++.|++||||||||||+|..+. .++.||||+|+|+.+|++++.+ +..+++++||+||+++
T Consensus 139 ~~~~~~~d~~gHGT~vAgiia~~~n~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~ 209 (395)
T 2z2z_A 139 TKLRDCADQNGHGTHVIGTIAALNND---------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVAD 209 (395)
T ss_dssp CCHHHHBCSSSHHHHHHHHHHCCCSS---------SSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSS
T ss_pred CCCCCCCCCCCCHHHHHHHHHeecCC---------CceEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCcccccc
Confidence 00012457899999999999997321 2368999999999999999877 7889999999999998
Q ss_pred --------------CCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeec
Q 044171 289 --------------GVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAAS 354 (813)
Q Consensus 289 --------------g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~ 354 (813)
+++|||||||.... ...+..+++++.++|++||+||||+|.....+|+..+++|+|||+
T Consensus 210 ~~~~~~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~ 282 (395)
T 2z2z_A 210 KDGDGIIAGDPDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAI 282 (395)
T ss_dssp TTCSSCCTTCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEE
T ss_pred ccccccccccccCCCCeEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEe
Confidence 99999999997542 256778888999999999999999998877889999999999995
Q ss_pred ccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCC
Q 044171 355 ITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDF 434 (813)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~ 434 (813)
+.+
T Consensus 283 ~~~----------------------------------------------------------------------------- 285 (395)
T 2z2z_A 283 DSN----------------------------------------------------------------------------- 285 (395)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 311
Q ss_pred CCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeee
Q 044171 435 ENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHAR 514 (813)
Q Consensus 435 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 514 (813)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhh
Q 044171 515 ARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATP 594 (813)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP 594 (813)
+.++.||++|| +|+|||++|+|+++ ++.|..++|||||||
T Consensus 286 ---------------~~~a~fS~~G~---------------~v~APG~~i~s~~~----------~~~y~~~sGTS~AaP 325 (395)
T 2z2z_A 286 ---------------DNIASFSNRQP---------------EVSAPGVDILSTYP----------DDSYETLMGTAMATP 325 (395)
T ss_dssp ---------------SCBCTTSCSSC---------------SEEEECSSEEEEET----------TTEEEEEESHHHHHH
T ss_pred ---------------CCCCcccCCCC---------------CEEeCCCCeeeecC----------CCceEecCCHHHHHH
Confidence 23688999997 57999999999984 358999999999999
Q ss_pred HHHHHHHHHHHhCC-------------CCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCcccc
Q 044171 595 HIAGVAALIKQRHP-------------KWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFI 661 (813)
Q Consensus 595 ~VAG~aALl~q~~p-------------~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~v 661 (813)
||||++|||+|++| .|++.+||++|++||+++...+ .++.||||+|
T Consensus 326 ~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g---------------------~~~~~G~G~v 384 (395)
T 2z2z_A 326 HVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG---------------------WDADYGYGVV 384 (395)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS---------------------SBTTTBTCBC
T ss_pred HHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC---------------------CCCCccCcee
Confidence 99999999999999 9999999999999999874322 2358999999
Q ss_pred CccCcCCC
Q 044171 662 NPARAIDP 669 (813)
Q Consensus 662 d~~~A~~~ 669 (813)
|+.+|++.
T Consensus 385 d~~~A~~~ 392 (395)
T 2z2z_A 385 RAALAVQA 392 (395)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3.7e-54 Score=492.43 Aligned_cols=335 Identities=21% Similarity=0.292 Sum_probs=258.5
Q ss_pred ceeeEEEeccceeEEEEEeCHHHHHHHHhc-CcCeeEEEeCccceeccCCCCc---------------ccCCCCCCCCCC
Q 044171 74 SYTKLYSYTHLLSGFAIHIESEEAVSTLQN-AKGVRIIHEDIKMEKLTMHTPE---------------FLGIPVGVWPTL 137 (813)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~~~~L~~-~p~V~~v~~~~~~~~~~~~~~~---------------~~~~~~~~w~~~ 137 (813)
+.++.++|. .+++|+++++.+++ ++|++ +|+|++|+++..+++....... .+..+..+|+.
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~-~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~- 141 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHA-NALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDD- 141 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHH-HHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGG-
T ss_pred CCEEEEecC-CccEEEEEeCHHHH-HHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhc-
Confidence 456778875 58999999999998 99999 9999999999888775432211 11112235554
Q ss_pred CCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCC
Q 044171 138 GGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRD 217 (813)
Q Consensus 138 ~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 217 (813)
+++|+||+|||||||||++||+|.++...... .++....|... ..+...+
T Consensus 142 ---~~~G~gv~VaViDtGid~~Hp~~~~~~~~~~~----------------------~~~~~~~~~~~-----~~~~~~~ 191 (471)
T 3t41_A 142 ---LPKHANTKIAIIDTGVMKNHDDLKNNFSTDSK----------------------NLVPLNGFRGT-----EPEETGD 191 (471)
T ss_dssp ---CCSSCCCCEEEEESCCCTTCTTTTTTBCTTCE----------------------ECCCTTCGGGC-----CTTCCCC
T ss_pred ---cCCCCCcEEEEEeCCCCCCChhHhcCcccCCc----------------------ccccCCCccCC-----CcccCCC
Confidence 68999999999999999999999986432100 00000001100 0111122
Q ss_pred CCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHHHHHHHHHHhCCCcEEEEcc
Q 044171 218 YASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADVVAAVDQAVEDGVDIISLSV 297 (813)
Q Consensus 218 ~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~~VIn~S~ 297 (813)
...+.|++||||||||||+|+. .+.||||+|+|+.+|++++..+..+++++||+||+++|++||||||
T Consensus 192 ~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~ 259 (471)
T 3t41_A 192 VHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISV 259 (471)
T ss_dssp TTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCC
Confidence 2456789999999999999873 2579999999999999988668889999999999999999999999
Q ss_pred CCCCCC----CC-----ChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCC------------------CCCCCCceEE
Q 044171 298 GPSAVP----SG-----PAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSS------------------ILSFSPWITS 350 (813)
Q Consensus 298 G~~~~~----~~-----~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~~~vit 350 (813)
|..... .+ .....+.+..+++.+.++|++||+||||+|..... .|+..+++|+
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vit 339 (471)
T 3t41_A 260 GSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVT 339 (471)
T ss_dssp CEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEE
T ss_pred CCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEE
Confidence 973210 00 02456788999999999999999999999976432 5677888888
Q ss_pred EeecccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEee
Q 044171 351 IAASITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTY 430 (813)
Q Consensus 351 VgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~ 430 (813)
|||++.+
T Consensus 340 VgA~~~~------------------------------------------------------------------------- 346 (471)
T 3t41_A 340 VGSTDQK------------------------------------------------------------------------- 346 (471)
T ss_dssp EEEECTT-------------------------------------------------------------------------
T ss_pred EEeeCCC-------------------------------------------------------------------------
Confidence 8884311
Q ss_pred ccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceee
Q 044171 431 SFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVV 510 (813)
Q Consensus 431 ~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~ 510 (813)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCc----------------------EEecc
Q 044171 511 FHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSS----------------------IWAAW 568 (813)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~----------------------I~Sa~ 568 (813)
+.+++||++||+. |||+|||++ |++++
T Consensus 347 -------------------~~~a~fS~~G~~~------------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~ 395 (471)
T 3t41_A 347 -------------------SNLSEFSNFGMNY------------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA 395 (471)
T ss_dssp -------------------SSBCTTCCBCTTT------------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC
T ss_pred -------------------CCCCCccCCCCCC------------CeEEecCCCcccccccccccccccccccCceeEecC
Confidence 2478999999963 499999987 89887
Q ss_pred CCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCC-CCCHHHHHHHHHccccccCCCCCcccccCCCCCcccccc
Q 044171 569 SPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHP-KWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHV 647 (813)
Q Consensus 569 ~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p-~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~ 647 (813)
+ ++.|..++|||||||||||++|||+|++| .++|++||++|++||++...
T Consensus 396 ~----------~~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~------------------- 446 (471)
T 3t41_A 396 N----------NGRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN------------------- 446 (471)
T ss_dssp T----------TSSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------------
T ss_pred C----------CCCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------------
Confidence 4 45899999999999999999999999999 89999999999999987532
Q ss_pred ccCCCCCccCccccCccCcCCC
Q 044171 648 LVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 648 ~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
.++..||||++|+.+|++.
T Consensus 447 ---~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 447 ---KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp ---CCHHHHTTCBBCHHHHTTT
T ss_pred ---CCcCccccChhCHHHHHHH
Confidence 2345899999999999985
No 7
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.6e-53 Score=494.94 Aligned_cols=338 Identities=24% Similarity=0.330 Sum_probs=252.4
Q ss_pred eeeEEEeccceeEEEEEeCH---HHHHHHHhc--CcCeeEEEeCccceeccC----CCC---------------------
Q 044171 75 YTKLYSYTHLLSGFAIHIES---EEAVSTLQN--AKGVRIIHEDIKMEKLTM----HTP--------------------- 124 (813)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~~~---~~~~~~L~~--~p~V~~v~~~~~~~~~~~----~~~--------------------- 124 (813)
.++.+++. .+++++++++. ++++++|++ +|+|++|||+..+++... ...
T Consensus 53 ~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 35566664 57899999864 555577864 899999999987654310 000
Q ss_pred -------cccCCCCCC-CCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCce
Q 044171 125 -------EFLGIPVGV-WPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKI 196 (813)
Q Consensus 125 -------~~~~~~~~~-w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki 196 (813)
..++++. + |+. ++|+||+|||||||||++||+|.++...
T Consensus 132 ~~~~W~l~~I~~~~-a~w~~-----~tG~gV~VAVIDTGVd~~HpdL~~~~~~--------------------------- 178 (671)
T 1r6v_A 132 SNELWGLEAIGVTQ-QLWEE-----ASGTNIIVAVVDTGVDGTHPDLEGQVIA--------------------------- 178 (671)
T ss_dssp GGGCHHHHHTTCCH-HHHHH-----CSCTTCEEEEEESCCBTTSGGGTTTBCC---------------------------
T ss_pred cccCCchhccCCch-hhhhc-----cCCCCCEEEEEeCCCCCCCccccccEEe---------------------------
Confidence 0112222 3 544 7899999999999999999999975321
Q ss_pred EEEEEchhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeC------
Q 044171 197 VGAQYFARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYT------ 270 (813)
Q Consensus 197 ~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~------ 270 (813)
++++..+. ..+ ...+..|.+||||||||||+|..+ + .++.||||+|+|+.+|+++.
T Consensus 179 --g~~~~~~~-----~~p--~~~d~~d~~gHGThVAGiIAa~~n------g---~gv~GVAP~A~I~~vkv~~~~~~~~g 240 (671)
T 1r6v_A 179 --GYRPAFDE-----ELP--AGTDSSYGGSAGTHVAGTIAAKKD------G---KGIVGVAPGAKIMPIVIFDDPALVGG 240 (671)
T ss_dssp --EEEGGGTE-----EEC--TTCBCCTTCSHHHHHHHHHHCCCS------S---SSCCCSCTTSEEEEEESBCCHHHHCT
T ss_pred --cccccCCC-----cCC--CCCCCccCCCcchhhhhhhhccCC------C---CceEEECCCCEEEEEEeccCccccCC
Confidence 11111100 000 012234678999999999999742 1 24689999999999999986
Q ss_pred CC-CCHHHHHHHHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCce
Q 044171 271 FG-GYMADVVAAVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS-SSILSFSPWI 348 (813)
Q Consensus 271 ~g-~~~~~i~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~v 348 (813)
.+ ...+.+++||+||+++|++|||||||+.. +...+..+++.|.++|++||+||||+|... ..+|+..+++
T Consensus 241 ~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~V 313 (671)
T 1r6v_A 241 NGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-------YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGV 313 (671)
T ss_dssp TSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC-------CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTC
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-------CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCe
Confidence 12 33456899999999999999999999743 235788889999999999999999999865 5678889999
Q ss_pred EEEeecccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEE
Q 044171 349 TSIAASITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIIC 428 (813)
Q Consensus 349 itVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~ 428 (813)
|+|||++.+..
T Consensus 314 ItVgA~d~~g~--------------------------------------------------------------------- 324 (671)
T 1r6v_A 314 IQVAALDYYGG--------------------------------------------------------------------- 324 (671)
T ss_dssp EEEEEEEEETT---------------------------------------------------------------------
T ss_pred EEEEEEcCCCC---------------------------------------------------------------------
Confidence 99999542100
Q ss_pred eeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCce
Q 044171 429 TYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQA 508 (813)
Q Consensus 429 ~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~ 508 (813)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCC--------CCCCC
Q 044171 509 VVFHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGD--------PNLKG 580 (813)
Q Consensus 509 v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~--------~~~~~ 580 (813)
...++.||++||.. ||+|||++|+|+++...... ....+
T Consensus 325 --------------------~~~~a~fSn~G~~v-------------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~ 371 (671)
T 1r6v_A 325 --------------------TFRVAGFSSRSDGV-------------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNG 371 (671)
T ss_dssp --------------------EEEECSSSCCCTTE-------------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSS
T ss_pred --------------------ceeeccccCCCCCe-------------eEEecCCCEEeecCCCCccccccccccccccCC
Confidence 01378999999976 99999999999987532110 01124
Q ss_pred CcceeeeccCChhhHHHHHHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccc
Q 044171 581 RNFALLSGTSMATPHIAGVAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGF 660 (813)
Q Consensus 581 ~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~ 660 (813)
+.|..++|||||||||||++|||+|++|++++.+||++|++||+++...+ .+..||||+
T Consensus 372 ~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g---------------------~d~~~G~G~ 430 (671)
T 1r6v_A 372 GTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---------------------WDHDTGYGL 430 (671)
T ss_dssp CCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS---------------------CBTTTBTCB
T ss_pred CceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC---------------------CCCCcccce
Confidence 58999999999999999999999999999999999999999999875332 234799999
Q ss_pred cCccCcCCCCeeee
Q 044171 661 INPARAIDPGLIFN 674 (813)
Q Consensus 661 vd~~~A~~~~lv~~ 674 (813)
+|+.+|++..+..+
T Consensus 431 vna~~Al~~~l~~~ 444 (671)
T 1r6v_A 431 VKLDAALQGPLPTQ 444 (671)
T ss_dssp CCHHHHHHCCCCSS
T ss_pred eCHHHHhhhhcCCC
Confidence 99999998766544
No 8
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.4e-55 Score=506.43 Aligned_cols=344 Identities=20% Similarity=0.241 Sum_probs=40.2
Q ss_pred ceeeEEEeccceeEEEEEeCHHHHHHHHhcCcCeeEEEeCccceecc-CCCCcccCCCC---CCCCCCCCCCCCCCCcEE
Q 044171 74 SYTKLYSYTHLLSGFAIHIESEEAVSTLQNAKGVRIIHEDIKMEKLT-MHTPEFLGIPV---GVWPTLGGAEFSGEGVVI 149 (813)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~-~~~~~~~~~~~---~~w~~~~~~~~~G~gv~V 149 (813)
..++.+.|+.+|+||+++++.+++ ++|+++|+|++||++..++.+. .+....+..+. ..|.. +.+|+||+|
T Consensus 108 ~~~v~~~y~~~~~Gfsv~l~~~~l-~~L~~~P~V~~Vepd~~v~~~~~pWgL~~i~~~~~~~~~w~~----~~~G~GV~V 182 (692)
T 2p4e_P 108 LTKILHVFHGLLPGFLVKMSGDLL-ELALKLPHVDYIEEDSSVFAQSIPWNLERITPPRYRADEYQP----PDGGSLVEV 182 (692)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGH-HHHHTSTTEEEEEEEEEEEEC----------------------------------
T ss_pred ccceeeEeeccccEEEEEeCHHHH-HHHHcCCCceEEEeccccccCCCCcchhhccccccccccccc----CCCCCCcEE
Confidence 357789999999999999999988 9999999999999999876531 11111122111 13443 689999999
Q ss_pred EEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCCCCCCCCCcc
Q 044171 150 GFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYASPFDADGHGS 229 (813)
Q Consensus 150 aVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT 229 (813)
||||||||++||+|.++.. |.+ +++..+ .+.......+.|.+||||
T Consensus 183 aVIDTGId~~HpdL~gr~~--------~~~--------------------~~~~~d------~dg~~~~~~~~D~~GHGT 228 (692)
T 2p4e_P 183 YLLDTSIQSDHREIEGRVM--------VTD--------------------FENVPE------EDGTRFHRQASKCDSHGT 228 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCCCCCCChhhcCceE--------ecc--------------------cccccC------CCCCcccCCCCCCCCcHH
Confidence 9999999999999997531 100 000000 000000134568899999
Q ss_pred ccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC------CCcEEEEccCCCCC
Q 044171 230 HTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED------GVDIISLSVGPSAV 302 (813)
Q Consensus 230 hVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~~VIn~S~G~~~~ 302 (813)
||||||+|+. .||||+|+|+.+|++++.| ++.+++++||+|++++ +++|||||||+.
T Consensus 229 HVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~-- 292 (692)
T 2p4e_P 229 HLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG-- 292 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCC--
Confidence 9999999872 5999999999999999877 7888999999999986 899999999963
Q ss_pred CCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEEeecccCccccceeeecCCcEEEeeecCCCC
Q 044171 303 PSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSS-SILSFSPWITSIAASITDRKYNNTIKLANGHSFSGIGLAPPT 381 (813)
Q Consensus 303 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (813)
+.+.++.+++++.++|++||+||||+|.+.. ..|+..+++|+|||++.+...
T Consensus 293 ------~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~--------------------- 345 (692)
T 2p4e_P 293 ------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc---------------------
Confidence 2356788888999999999999999997653 347888999999996422100
Q ss_pred CCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeC
Q 044171 382 LGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMD 461 (813)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 461 (813)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCeeeecccCCCC
Q 044171 462 PDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVVASYSSRGPD 541 (813)
Q Consensus 462 ~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~ 541 (813)
...-+.||+|||.
T Consensus 346 -------------------------------------------------------------------a~~ss~fSn~G~~ 358 (692)
T 2p4e_P 346 -------------------------------------------------------------------VTLGTLGTNFGRC 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------------------------------cccccccCCCCCc
Confidence 0001238889875
Q ss_pred cCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCCHHHHHHHHHc
Q 044171 542 VNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWSPAAITSAMMT 621 (813)
Q Consensus 542 ~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~ 621 (813)
+ ||+|||++|+|+++.. ++.|..++|||||||||||++|||+|++|+|+|++||++|++
T Consensus 359 v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~ 417 (692)
T 2p4e_P 359 V-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIH 417 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred e-------------eEEecCCcEEeeccCC--------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 4 9999999999998642 247999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccccCCCCCccccccccCCCCCccCccc--cCccCcCC
Q 044171 622 SAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGF--INPARAID 668 (813)
Q Consensus 622 TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~--vd~~~A~~ 668 (813)
||.+....+.++........|+.- ...+.....+|+|+ .+++.+..
T Consensus 418 tA~~~~~~~~~~p~~~~~~tpN~l-~~~~~~~~~~G~~l~~~~~w~~~s 465 (692)
T 2p4e_P 418 FSAKDVINEAWFPEDQRVLTPNLV-AALPPSTHGAGWQLFCRTVWSAHS 465 (692)
T ss_dssp -------------------------------------------------
T ss_pred hccccccCCCCCccccCCCCccee-ecCCCccccCCCCccccccccccC
Confidence 997643221111000000011100 01111345688998 88887764
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3.1e-52 Score=471.14 Aligned_cols=390 Identities=23% Similarity=0.332 Sum_probs=272.2
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhh
Q 044171 126 FLGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARA 205 (813)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~ 205 (813)
.++.+. +|+. +|+||+|||||||||++||+|.++.. .++++..
T Consensus 10 ~i~~~~-~w~~------~g~gv~VaViDtGvd~~Hp~l~~~~~-----------------------------~~~~~~~- 52 (441)
T 1y9z_A 10 FVGATV-LSDS------QAGNRTICIIDSGYDRSHNDLNANNV-----------------------------TGTNNSG- 52 (441)
T ss_dssp HTTCSS-SCCT------TGGGCEEEEEESCCCTTSTTTTTSEE-----------------------------EECCCTT-
T ss_pred hcChhh-hhhc------CCCCcEEEEEcCCCCCCChhHhcCcc-----------------------------cCcccCC-
Confidence 455544 7865 47799999999999999999986421 1111111
Q ss_pred hhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCc--cEEEEEEeeCCC-CCHHHHHHHH
Q 044171 206 AIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGA--RIAVYKALYTFG-GYMADVVAAV 282 (813)
Q Consensus 206 ~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A--~l~~~kv~~~~g-~~~~~i~~ai 282 (813)
..++..+.|++||||||||||+|..+. .++.||||+| +|+.+|+++..+ +..+++++||
T Consensus 53 ---------~~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai 114 (441)
T 1y9z_A 53 ---------TGNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAI 114 (441)
T ss_dssp ---------SCCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHH
T ss_pred ---------CCCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHH
Confidence 011234568899999999999997531 2368999995 899999999877 7888999999
Q ss_pred HHHHhC-CCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCcccc
Q 044171 283 DQAVED-GVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYN 361 (813)
Q Consensus 283 ~~a~~~-g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~ 361 (813)
+||+++ |++|||||||.... ...+..++++|.++|++||+||||+|.....+|+..+++|+|||++.+....
T Consensus 115 ~~a~~~~g~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~ 187 (441)
T 1y9z_A 115 DTCVNSGGANVVTMSLGGSGS-------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHA 187 (441)
T ss_dssp HHHHHTTCCSEEEECCCBSCC-------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBC
T ss_pred HHHHHhcCCcEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCC
Confidence 999999 99999999997542 2456778889999999999999999988788899999999999999876554
Q ss_pred ceeeecCCcEEEeee--c-CCCCCCCce----------------ee--------eEEecccccCcccccccccccCCCC-
Q 044171 362 NTIKLANGHSFSGIG--L-APPTLGRVY----------------YP--------LAAAADVCHRNVSTGIFSLESCQYP- 413 (813)
Q Consensus 362 ~~~~~~~~~~~~~~~--~-~~~~~~~~~----------------~~--------~~~~~~~~~~~~~~~~~~~~~c~~~- 413 (813)
.+...+....+.... + .....++.. +| +.+..+...... ......|...
T Consensus 188 ~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~---~~~~~~C~~~~ 264 (441)
T 1y9z_A 188 AFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASA---TGALAECTVNG 264 (441)
T ss_dssp TTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEE---EEEEEEEEEET
T ss_pred ccccCCCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCcccccccccccc---ccchhcccccc
Confidence 443333222221110 0 000000000 00 111111110000 0112346532
Q ss_pred CCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCC----c-cccccCCcceEEEcccch
Q 044171 414 ELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPN----K-FKDMALDVPGIILNNMQS 488 (813)
Q Consensus 414 ~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~----~-~~~~~~~ip~~~i~~~~~ 488 (813)
..+...+++|||++|.|+... ...+.+.+|..+++++|+.++|++++... .+. . .......+|.+.+ +..+
T Consensus 265 ~~~~~~~~~gkivl~~rg~~~-~~~~~~~~~~~~~~~aGa~gvii~~~~~~--~g~~~~~~~~~~~~~~~p~~~v-~~~~ 340 (441)
T 1y9z_A 265 TSFSCGNMANKICLVERVGNQ-GSSYPEINSTKACKTAGAKGIIVYSNSAL--PGLQNPFLVDANSDITVPSVSV-DRAT 340 (441)
T ss_dssp TEEECCCCTTEEEEEECCSCS-SSSCTHHHHHHHHHHTTCSEEEEECCTTS--CSCCCCEEECTTCCCCSCEEEE-CHHH
T ss_pred ccccCCCccccEEEEeccccC-cccccHHHHHHHHHhcCCeEEEEEeCCCc--cccccccccccccCccccEEEE-eHHH
Confidence 356677899999999985321 12246678999999999999999998652 221 1 1123456888776 5567
Q ss_pred hHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEecc
Q 044171 489 SMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAW 568 (813)
Q Consensus 489 g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~ 568 (813)
++.|+.|+.+. . .+ ++.
T Consensus 341 g~~l~~~~~~~------------------------------------------~-------------t~--------~~~ 357 (441)
T 1y9z_A 341 GLALKAKLGQS------------------------------------------T-------------TV--------SNQ 357 (441)
T ss_dssp HHHHHTTTTSE------------------------------------------E-------------EE--------EEE
T ss_pred HHHHHHHhcCC------------------------------------------c-------------cc--------ccc
Confidence 77777654211 0 00 111
Q ss_pred CCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccc
Q 044171 569 SPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVL 648 (813)
Q Consensus 569 ~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (813)
.++.|..+||||||||||||++|||+|+||+|+|++||++||+||++++..+.
T Consensus 358 ----------~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g~----------------- 410 (441)
T 1y9z_A 358 ----------GNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGR----------------- 410 (441)
T ss_dssp ----------EEESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSSC-----------------
T ss_pred ----------cCCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCCC-----------------
Confidence 13489999999999999999999999999999999999999999998754332
Q ss_pred cCCCCCccCccccCccCcCCCCeeeecchhhHHHhhccCCC
Q 044171 649 VHATPFDFGAGFINPARAIDPGLIFNAHFQEYVQFLCAVPG 689 (813)
Q Consensus 649 ~~~~~~~~GaG~vd~~~A~~~~lv~~~~~~~~~~~~~~~~~ 689 (813)
+++||+|+||+.+|+ +|+.|||+.+.
T Consensus 411 ----~~~~G~G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 411 ----DNQTGYGMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp ----BTTTBTCBCCHHHHH-----------HHHHHCTTCC-
T ss_pred ----cccccccccCHHHHH-----------HHHHhhhcCCC
Confidence 347999999999995 68999999874
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2.4e-51 Score=435.57 Aligned_cols=266 Identities=31% Similarity=0.446 Sum_probs=213.0
Q ss_pred CCCcccCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEE
Q 044171 122 HTPEFLGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQY 201 (813)
Q Consensus 122 ~~~~~~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~ 201 (813)
+..+.++++. +|+. +..|+||+|||||||||++||+|.++ ++.+++
T Consensus 13 w~l~~i~~~~-aw~~----~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------------~~~~~~ 58 (280)
T 1dbi_A 13 YGPQNTYTDY-AWDV----TKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------------VIKGYD 58 (280)
T ss_dssp CTTGGGTHHH-HTTT----CCCCTTCEEEEEESCCCTTSTTTTTT-----------------------------EEEEEE
T ss_pred CChhhcCcHH-HHhh----cCCCCCCEEEEEeCCcCCCChhhccC-----------------------------ccccee
Confidence 3344455444 7876 45667999999999999999999863 455666
Q ss_pred chhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHH
Q 044171 202 FARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVA 280 (813)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ 280 (813)
|.+. ...+.|.+||||||||||+|..++. .++.||||+|+|+.+|+++..+ +..+++++
T Consensus 59 ~~~~------------~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ 118 (280)
T 1dbi_A 59 FVDN------------DYDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIAD 118 (280)
T ss_dssp TTTT------------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHH
T ss_pred ccCC------------CCCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHH
Confidence 6543 1345688999999999999975321 2468999999999999998876 78899999
Q ss_pred HHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccc
Q 044171 281 AVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKY 360 (813)
Q Consensus 281 ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~ 360 (813)
||+||+++|++|||||||.... ...++.+++++.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 119 ai~~a~~~g~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--- 188 (280)
T 1dbi_A 119 AIIYAADSGAEVINLSLGCDCH-------TTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY--- 188 (280)
T ss_dssp HHHHHHHTTCSEEEECCSSCCC-------CHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT---
T ss_pred HHHHHHHCCCCEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC---
Confidence 9999999999999999997532 256788888999999999999999998777788889999999985311
Q ss_pred cceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchh
Q 044171 361 NNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDAT 440 (813)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~ 440 (813)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccC
Q 044171 441 IATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDG 520 (813)
Q Consensus 441 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 520 (813)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHH
Q 044171 521 RRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVA 600 (813)
Q Consensus 521 ~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~a 600 (813)
+.++.||++||.. ||+|||++|+++++ ++.|..++|||||||||||++
T Consensus 189 ---------~~~~~~S~~G~~~-------------dv~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~a 236 (280)
T 1dbi_A 189 ---------DRLASFSNYGTWV-------------DVVAPGVDIVSTIT----------GNRYAYMSGTSMASPHVAGLA 236 (280)
T ss_dssp ---------SCBCTTBCCSTTC-------------CEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHH
T ss_pred ---------CCcCCCCCCCCCc-------------eEEEecCCeEeecC----------CCCEEEccCHHHHHHHHHHHH
Confidence 1368899999865 99999999999984 458999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 601 ALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 601 ALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
|||++ |.+++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 237 All~~--p~~t~~~v~~~L~~ta~~~~~~-----------------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 237 ALLAS--QGRNNIEIRQAIEQTADKISGT-----------------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp HHHHH--TTCCHHHHHHHHHHTSBCCTTB-----------------------TTTBSSEECCHHHHHT
T ss_pred HHHHC--CCCCHHHHHHHHHHhCccCCCC-----------------------CCcccCCEECHHHHhc
Confidence 99987 8999999999999999986422 1379999999999975
No 11
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=4.1e-51 Score=433.87 Aligned_cols=262 Identities=32% Similarity=0.512 Sum_probs=219.5
Q ss_pred cccCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchh
Q 044171 125 EFLGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFAR 204 (813)
Q Consensus 125 ~~~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~ 204 (813)
+.++++. +|+. .+|+||+|||||||||++||+|.++ ++.+++|.+
T Consensus 16 ~~i~~~~-aw~~-----~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~ 60 (279)
T 1thm_A 16 QKIQAPQ-AWDI-----AEGSGAKIAIVDTGVQSNHPDLAGK-----------------------------VVGGWDFVD 60 (279)
T ss_dssp HHTTHHH-HHTT-----CCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEETTT
T ss_pred hhCChHH-HHhc-----CCCCCCEEEEEccCCCCCCcchhcC-----------------------------ccccccccC
Confidence 3345444 7876 4799999999999999999999863 555666654
Q ss_pred hhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHH
Q 044171 205 AAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVD 283 (813)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~ 283 (813)
+ ...+.|.+||||||||||+|...++ .++.||||+|+|+.+|+++..+ +..+++++||+
T Consensus 61 ~------------~~~~~d~~gHGT~vAgiia~~~~n~--------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~ 120 (279)
T 1thm_A 61 N------------DSTPQNGNGHGTHCAGIAAAVTNNS--------TGIAGTAPKASILAVRVLDNSGSGTWTAVANGIT 120 (279)
T ss_dssp T------------BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHH
T ss_pred C------------CCCCCCCCCcHHHHHHHHhCccCCC--------CccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHH
Confidence 3 1345688999999999999975322 2368999999999999998876 78889999999
Q ss_pred HHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccccce
Q 044171 284 QAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYNNT 363 (813)
Q Consensus 284 ~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~ 363 (813)
||+++|++|||||||.... .+.++.+++++.++|+++|+||||+|.....+|+..+++|+|||++.+
T Consensus 121 ~a~~~g~~Vin~S~G~~~~-------~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------ 187 (279)
T 1thm_A 121 YAADQGAKVISLSLGGTVG-------NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------ 187 (279)
T ss_dssp HHHHTTCSEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT------
T ss_pred HHHHCCCCEEEEecCCCCC-------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC------
Confidence 9999999999999997542 256788888999999999999999998877888999999999985311
Q ss_pred eeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHH
Q 044171 364 IKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIAT 443 (813)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~ 443 (813)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeee
Q 044171 444 VADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRA 523 (813)
Q Consensus 444 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 523 (813)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHH
Q 044171 524 IYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALI 603 (813)
Q Consensus 524 ~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl 603 (813)
+.++.||++||.. ||+|||++|+++++ ++.|..++|||||||||||++|||
T Consensus 188 ------~~~~~fS~~G~~~-------------dv~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll 238 (279)
T 1thm_A 188 ------DNKSSFSTYGSWV-------------DVAAPGSSIYSTYP----------TSTYASLSGTSMATPHVAGVAGLL 238 (279)
T ss_dssp ------SCBCTTCCCCTTC-------------CEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHH
T ss_pred ------CCcCCcCCCCCce-------------EEEEcCCCeEEEeC----------CCCEEEcccHHHHHHHHHHHHHHH
Confidence 1367899999865 99999999999984 358999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 604 KQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 604 ~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
++|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 239 --~~p~~t~~~v~~~L~~ta~~~~~~~-----------------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 239 --ASQGRSASNIRAAIENTADKISGTG-----------------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp --HTTTCCHHHHHHHHHHTCBCCTTBT-----------------------TTBSSEECCHHHHHH
T ss_pred --HCCCcCHHHHHHHHHHhCccCCCCC-----------------------ccccCCeeCHHHHhc
Confidence 5799999999999999999875322 369999999999974
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.4e-50 Score=425.06 Aligned_cols=253 Identities=34% Similarity=0.518 Sum_probs=213.7
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||| .+||+|+. ..+++|..+
T Consensus 16 a~~~----g~~G~gv~VaViDtGi-~~h~~l~~-------------------------------~~~~~~~~~------- 52 (269)
T 1gci_A 16 AHNR----GLTGSGVKVAVLDTGI-STHPDLNI-------------------------------RGGASFVPG------- 52 (269)
T ss_dssp HHHT----TCSCTTCEEEEEESCC-CCCTTCCE-------------------------------EEEEECSTT-------
T ss_pred HHhc----CCCCCCCEEEEECCCC-CCCHhhcc-------------------------------cCCcccCCC-------
Confidence 6665 7899999999999999 89999942 233444322
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhCCCc
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVEDGVD 291 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~ 291 (813)
...+.|.+||||||||||+|..+. ..+.||||+|+|+.+|+++..+ +..+++++||+|+++++++
T Consensus 53 -----~~~~~d~~gHGT~vAgiia~~~~~---------~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~ 118 (269)
T 1gci_A 53 -----EPSTQDGNGHGTHVAGTIAALNNS---------IGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMH 118 (269)
T ss_dssp -----CCSCSCSSSHHHHHHHHHHCCCSS---------SBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCS
T ss_pred -----CCCCCCCCCChHHHHHHHhcCcCC---------CCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCe
Confidence 123567899999999999997321 2368999999999999998876 7788999999999999999
Q ss_pred EEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccccceeeecCCcE
Q 044171 292 IISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYNNTIKLANGHS 371 (813)
Q Consensus 292 VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~ 371 (813)
|||||||.... ...++.+++++.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 119 Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 177 (269)
T 1gci_A 119 VANLSLGSPSP-------SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN-------------- 177 (269)
T ss_dssp EEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------
T ss_pred EEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC--------------
Confidence 99999997542 256788888999999999999999998878888999999999985311
Q ss_pred EEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhc
Q 044171 372 FSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKI 451 (813)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~ 451 (813)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCe
Q 044171 452 EAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPV 531 (813)
Q Consensus 452 Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 531 (813)
+.
T Consensus 178 ------------------------------------------------------------------------------~~ 179 (269)
T 1gci_A 178 ------------------------------------------------------------------------------NN 179 (269)
T ss_dssp ------------------------------------------------------------------------------SC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 13
Q ss_pred eeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCC
Q 044171 532 VASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWS 611 (813)
Q Consensus 532 ~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s 611 (813)
++.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|++|+|+
T Consensus 180 ~~~~S~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t 236 (269)
T 1gci_A 180 RASFSQYGAGL-------------DIVAPGVNVQSTYP----------GSTYASLNGTSMATPHVAGAAALVKQKNPSWS 236 (269)
T ss_dssp BCTTCCCSTTE-------------EEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCCCCCCCCCc-------------ceEecCCCeEeecC----------CCCEEEcCcHHHHHHHHHHHHHHHHHhCCCCC
Confidence 67899999876 99999999999984 45899999999999999999999999999999
Q ss_pred HHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 612 PAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 612 ~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
+.+||++|++||+++. +++.||||++|+.+|++
T Consensus 237 ~~~v~~~L~~tA~~~g------------------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 237 NVQIRNHLKNTATSLG------------------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHHTSBCCS------------------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHhCccCC------------------------CCCCcccCccCHHHHcC
Confidence 9999999999998763 12379999999999985
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.8e-50 Score=427.71 Aligned_cols=254 Identities=33% Similarity=0.536 Sum_probs=212.0
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 16 ~~~~----g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~------- 53 (274)
T 1r0r_E 16 VQAQ----GFKGANVKVAVLDTGIQASHPDLNV-------------------------------VGGASFVAG------- 53 (274)
T ss_dssp HHHH----TCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECSTT-------
T ss_pred HHhc----CCCCCCCEEEEEcCCCCCCCHhHcC-------------------------------CCCccccCC-------
Confidence 5665 7899999999999999999999941 223444322
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhCCCc
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVEDGVD 291 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~ 291 (813)
...+.|.+||||||||||+|..+. ..+.||||+|+|+.+|+++..+ +..+++++||+||++++++
T Consensus 54 -----~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~ 119 (274)
T 1r0r_E 54 -----EAYNTDGNGHGTHVAGTVAALDNT---------TGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMD 119 (274)
T ss_dssp -----CCTTCCSSSHHHHHHHHHHCCSSS---------SBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCS
T ss_pred -----CCCCCCCCCCHHHHHHHHHccCCC---------CceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCC
Confidence 122457899999999999997421 2368999999999999998877 7788999999999999999
Q ss_pred EEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC----CCCCCCCCceEEEeecccCccccceeeec
Q 044171 292 IISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS----SSILSFSPWITSIAASITDRKYNNTIKLA 367 (813)
Q Consensus 292 VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~~~ 367 (813)
|||||||.... .+.+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.+
T Consensus 120 Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~---------- 182 (274)
T 1r0r_E 120 VINMSLGGASG-------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN---------- 182 (274)
T ss_dssp EEEECEEBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT----------
T ss_pred EEEeCCCCCCC-------cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC----------
Confidence 99999997542 25678888899999999999999999763 4567788999999985311
Q ss_pred CCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHH
Q 044171 368 NGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADN 447 (813)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~ 447 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecC
Q 044171 448 IKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHG 527 (813)
Q Consensus 448 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 527 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhC
Q 044171 528 QAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRH 607 (813)
Q Consensus 528 ~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~ 607 (813)
+.++.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|++
T Consensus 183 --~~~~~~S~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~ 237 (274)
T 1r0r_E 183 --SNRASFSSVGAEL-------------EVMAPGAGVYSTYP----------TNTYATLNGTSMASPHVAGAAALILSKH 237 (274)
T ss_dssp --SCBCTTCCCSTTE-------------EEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHHS
T ss_pred --CCcCccCCCCCCc-------------eEEeCCCCeEeecC----------CCCEEEeccHHHHHHHHHHHHHHHHHHC
Confidence 1367899999865 99999999999984 4589999999999999999999999999
Q ss_pred CCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 608 PKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 608 p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
|++++++||++|++||+++. +++.||||++|+.+|++
T Consensus 238 p~lt~~~v~~~L~~tA~~~g------------------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 238 PNLSASQVRNRLSSTATYLG------------------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp TTCCHHHHHHHHHHTCBCCS------------------------CHHHHTTCBCCHHHHTC
T ss_pred CCCCHHHHHHHHHHhCcccC------------------------CCCCcccCccCHHHHhC
Confidence 99999999999999998763 12479999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4.2e-50 Score=426.29 Aligned_cols=256 Identities=31% Similarity=0.515 Sum_probs=212.6
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|+. ..+++|..+
T Consensus 16 ~~~~----g~~G~gv~VaViDtGid~~h~~l~~-------------------------------~~g~~~~~~------- 53 (281)
T 1to2_E 16 LHSQ----GYTGSNVKVAVIDSGIDSSHPDLKV-------------------------------AGGASMVPS------- 53 (281)
T ss_dssp HHHH----TCSCTTCEEEEEESCCCTTCTTCCE-------------------------------EEEEECCTT-------
T ss_pred HHhc----CCCCCCCEEEEEcCCCCCCCHHHcC-------------------------------cCCccccCC-------
Confidence 5665 6899999999999999999999952 223333321
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhCCCc
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVEDGVD 291 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~ 291 (813)
+.....|..||||||||||+|..+. ..+.||||+|+|+.+|+++..+ +..++++++|+|+++++++
T Consensus 54 ----~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~ 120 (281)
T 1to2_E 54 ----ETNPFQDNNSHGTHVAGTVAALNNS---------IGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMD 120 (281)
T ss_dssp ----CCCTTCCSSSHHHHHHHHHHCCSSS---------SSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCS
T ss_pred ----CCCCCCCCCCcHHHHHHHHhccCCC---------CcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCc
Confidence 1112357889999999999997421 2368999999999999998876 7788999999999999999
Q ss_pred EEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC----CCCCCCCCceEEEeecccCccccceeeec
Q 044171 292 IISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS----SSILSFSPWITSIAASITDRKYNNTIKLA 367 (813)
Q Consensus 292 VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~~~vitVgA~~~~~~~~~~~~~~ 367 (813)
|||||||.... ...+..+++++.++|++||+||||+|... ..+|+..+++|+|||++.+
T Consensus 121 Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~---------- 183 (281)
T 1to2_E 121 VINMSLGGPSG-------SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS---------- 183 (281)
T ss_dssp EEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT----------
T ss_pred EEEECCcCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC----------
Confidence 99999997542 25778888899999999999999999763 4567788999999984311
Q ss_pred CCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHH
Q 044171 368 NGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADN 447 (813)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~ 447 (813)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecC
Q 044171 448 IKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHG 527 (813)
Q Consensus 448 ~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 527 (813)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhC
Q 044171 528 QAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRH 607 (813)
Q Consensus 528 ~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~ 607 (813)
+.++.||++||.. ||+|||++|+++++ ++.|..++|||||||||||++|||+|++
T Consensus 184 --~~~~~fS~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~ 238 (281)
T 1to2_E 184 --NQRASFSSVGPEL-------------DVMAPGVSIQSTLP----------GNKYGAYNGTSMASPHVAGAAALILSKH 238 (281)
T ss_dssp --SCBCTTCCCSTTC-------------CEEEECSSEEEEET----------TTEEEEECBHHHHHHHHHHHHHHHHHHS
T ss_pred --CCcCCcCCCCCCc-------------eEEecCCCeEeecC----------CCCEEecCcHHHHHHHHHHHHHHHHHhC
Confidence 2367899999865 99999999999984 3589999999999999999999999999
Q ss_pred CCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 608 PKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 608 p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
|+|++++||++|++||+++. +++.||||++|+.+|++.
T Consensus 239 p~lt~~~v~~~L~~tA~~~g------------------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 239 PNWTNTQVRSSLENTTTKLG------------------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp TTCCHHHHHHHHHTTCBCCS------------------------CHHHHTTCBCCHHHHTSS
T ss_pred CCCCHHHHHHHHHhhCcccC------------------------CCCCcccceecHHHHhhh
Confidence 99999999999999998763 124799999999999975
No 15
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=8.2e-51 Score=433.10 Aligned_cols=265 Identities=25% Similarity=0.295 Sum_probs=209.7
Q ss_pred CCCC-CCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCC
Q 044171 141 EFSG-EGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYA 219 (813)
Q Consensus 141 ~~~G-~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~ 219 (813)
.++| +||+|||||||||++||+|.++.. ..+++... ....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~~-----------------------------~~~~~~~~----------~~~~ 43 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGADL-----------------------------TVLPTLAP----------TAAR 43 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCEE-----------------------------EECCCSSC----------CCCC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCee-----------------------------ecCcCCCC----------CCCC
Confidence 3688 799999999999999999987531 11111100 0112
Q ss_pred CCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC--CCHHHHHHHHHHHHhCCCcEEEEcc
Q 044171 220 SPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG--GYMADVVAAVDQAVEDGVDIISLSV 297 (813)
Q Consensus 220 ~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~~VIn~S~ 297 (813)
...|.+||||||||||+|+.+ ..+.||||+|+|+.+|++.+.+ ....++++||+||++++++||||||
T Consensus 44 ~d~~~~gHGT~VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~ 113 (282)
T 3zxy_A 44 SDGFMSAHGTHVASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISG 113 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCcccceeehhhccCC----------ceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccC
Confidence 223457999999999999753 2368999999999999987643 6677899999999999999999999
Q ss_pred CCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccccceeeecCCcEEEeeec
Q 044171 298 GPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYNNTIKLANGHSFSGIGL 377 (813)
Q Consensus 298 G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~ 377 (813)
|...... .....++.+++.+.++|+++|+||||+|......|+..+++|+|||++.+
T Consensus 114 G~~~~~~---~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------- 170 (282)
T 3zxy_A 114 GELTDFG---EADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH-------------------- 170 (282)
T ss_dssp CEEESSS---CCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT--------------------
T ss_pred ccccccc---cccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC--------------------
Confidence 9643321 13456788899999999999999999998888888899999999985311
Q ss_pred CCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEE
Q 044171 378 APPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFI 457 (813)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i 457 (813)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCeeeeccc
Q 044171 458 LRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVVASYSS 537 (813)
Q Consensus 458 ~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS 537 (813)
+.++.||+
T Consensus 171 ------------------------------------------------------------------------~~~~~~S~ 178 (282)
T 3zxy_A 171 ------------------------------------------------------------------------GHPLDFSN 178 (282)
T ss_dssp ------------------------------------------------------------------------SCBCSSSC
T ss_pred ------------------------------------------------------------------------CccccccC
Confidence 23577899
Q ss_pred CCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhC----CCCCHH
Q 044171 538 RGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRH----PKWSPA 613 (813)
Q Consensus 538 ~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~----p~~s~~ 613 (813)
||+. ..||||+|||++|+|+.+ ++.|..++|||||||||||++|||+|++ |.++|+
T Consensus 179 ~~~~----------~~~~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~ 238 (282)
T 3zxy_A 179 WGST----------YEQQGILAPGEDILGAKP----------GGGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQ 238 (282)
T ss_dssp CCHH----------HHHHEEEEECSSEEEECT----------TSCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred CCCC----------ccccceeccCcceeeecC----------CCceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHH
Confidence 9875 367899999999999984 4589999999999999999999999975 789999
Q ss_pred HHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 614 AITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 614 ~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
+||++|++||++++.. .+...+.+|+|+||+.+|++
T Consensus 239 ~vk~~L~~tA~~~~~~-------------------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 239 KVRQLLLQSALPCDDD-------------------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHCBCC--------------------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHHHhhCeeCCCC-------------------CCCccCceeeeEeCHHHHHH
Confidence 9999999999876421 12334579999999999985
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=7e-52 Score=455.10 Aligned_cols=301 Identities=21% Similarity=0.222 Sum_probs=190.0
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCce----EEEEEchhhhhh
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKI----VGAQYFARAAIA 208 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki----~g~~~~~~~~~~ 208 (813)
+|+. +..|++|+|||||||||++||+|++..... ....|...++....... ..+..+ ..++.+....
T Consensus 23 ~w~~----~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 93 (357)
T 4h6x_A 23 LHNQ----TLGDPQITIVIIDGDPDYTLSCFEGAEVSK--VFPYWHEPAEPITPEDY-AAFQSIRDQGLKGKEKEEAL-- 93 (357)
T ss_dssp HHHH----CSCCTTSEEEEEESCCCTTSGGGTTCEEEE--CCCTTSCCCCCCCHHHH-HHHHHHHHHTCCSHHHHHHH--
T ss_pred HHHh----cCCCCCCEEEEEcCCCCCCChhHcCCCccc--ccccccccccccCcccc-cccccccCcccccccccccc--
Confidence 6776 567899999999999999999999764311 11245443332110000 000000 0000000000
Q ss_pred cCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC------CCHHHHHHHH
Q 044171 209 YGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG------GYMADVVAAV 282 (813)
Q Consensus 209 ~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g------~~~~~i~~ai 282 (813)
.....+..++.|.+||||||||||+|+.+ +.+.||||+|+|+.+|++.... ....++++||
T Consensus 94 ---~~~~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai 160 (357)
T 4h6x_A 94 ---EAVIPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAI 160 (357)
T ss_dssp ---HHHCTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHH
T ss_pred ---ccccCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHH
Confidence 00011123345678999999999999753 2468999999999999975421 3445789999
Q ss_pred HHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccccc
Q 044171 283 DQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYNN 362 (813)
Q Consensus 283 ~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~ 362 (813)
+||++.|++|||||||..... ....+.+..+++++.++|++||+||||+|.....+|+..+++|+|||++.+
T Consensus 161 ~~a~~~g~~Vin~S~G~~~~~---~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----- 232 (357)
T 4h6x_A 161 DLALELGANIIHCAFCRPTQT---SEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD----- 232 (357)
T ss_dssp HHHHHTTCSEEEEC--------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-----
T ss_pred HHHHHcCCCEEeeccccCCcc---ccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-----
Confidence 999999999999999975433 224567888999999999999999999998888889999999999985311
Q ss_pred eeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHH
Q 044171 363 TIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIA 442 (813)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~ 442 (813)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCee
Q 044171 443 TVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRR 522 (813)
Q Consensus 443 ~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 522 (813)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHH
Q 044171 523 AIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAAL 602 (813)
Q Consensus 523 ~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aAL 602 (813)
+.++.||+||+. ..||||+|||++|+|+++. ++.|..++|||||||||||++||
T Consensus 233 -------~~~~~fSn~G~~----------~~~~di~APG~~i~s~~~~---------~~~~~~~sGTS~AaP~vaG~~Al 286 (357)
T 4h6x_A 233 -------GTPCHFSNWGGN----------NTKEGILAPGEEILGAQPC---------TEEPVRLTGTSMAAPVMTGISAL 286 (357)
T ss_dssp -------SSBCTTCC---C----------TTTTEEEEECSSEEECCTT---------CSCCEEECSHHHHHHHHHHHHHH
T ss_pred -------CcccccccCCCC----------CCccceeecCCCeEeccCC---------CCcccccCcHHHHHHHHHHHHHH
Confidence 236889999975 4699999999999999863 34678899999999999999999
Q ss_pred HHH----hCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 603 IKQ----RHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 603 l~q----~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
|++ ++|.|+++|||++|++||++++... ...+++||+|+||+.+|++
T Consensus 287 l~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~-------------------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 287 LMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV-------------------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHC---------------------------------CTTCBCCHHHHHH
T ss_pred HHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC-------------------CCCcccceeEEecHHHHHH
Confidence 996 4668999999999999999874221 2234579999999999986
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=9.6e-50 Score=432.51 Aligned_cols=267 Identities=30% Similarity=0.426 Sum_probs=214.4
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhh
Q 044171 127 LGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAA 206 (813)
Q Consensus 127 ~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~ 206 (813)
++++. +|+. +++|+||+|||||||||++||+|.++ ++.+++|..+.
T Consensus 28 i~~~~-aw~~----~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~~~~ 73 (327)
T 2x8j_A 28 VEAPA-VWRA----SAKGAGQIIGVIDTGCQVDHPDLAER-----------------------------IIGGVNLTTDY 73 (327)
T ss_dssp TTHHH-HHHH----HGGGTTCEEEEEESCCCTTCTTTGGG-----------------------------EEEEEECSSGG
T ss_pred cChHH-HHhc----CCCCCCCEEEEEcCCCCCCChhHhhc-----------------------------ccCCccccCCC
Confidence 44443 6766 68999999999999999999999863 55566665441
Q ss_pred hhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHH
Q 044171 207 IAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQA 285 (813)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a 285 (813)
. .+.....|+.||||||||||+|..+. ..+.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 74 ~--------~~~~~~~d~~gHGT~VAgiia~~~~~---------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 136 (327)
T 2x8j_A 74 G--------GDETNFSDNNGHGTHVAGTVAAAETG---------SGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYA 136 (327)
T ss_dssp G--------GCTTCCCCSSSHHHHHHHHHHCCCCS---------SBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHH
T ss_pred C--------CCCCCCCCCCCchHHHHHHHhccCCC---------CCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHH
Confidence 1 01123568899999999999997421 2368999999999999998877 7788999999999
Q ss_pred Hh------CCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC-----CCCCCCCCceEEEeec
Q 044171 286 VE------DGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS-----SSILSFSPWITSIAAS 354 (813)
Q Consensus 286 ~~------~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~~~vitVgA~ 354 (813)
++ .+++|||||||.... .+.+..+++++.++|++||+||||+|... ..+|+..+++|+|||+
T Consensus 137 ~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~ 209 (327)
T 2x8j_A 137 VDWRGPKGEQMRIITMSLGGPTD-------SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAV 209 (327)
T ss_dssp HHCCCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEE
T ss_pred HhhcccccCCceEEEECCCcCCC-------CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEE
Confidence 99 899999999997542 25678888899999999999999999752 4567888999999985
Q ss_pred ccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCC
Q 044171 355 ITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDF 434 (813)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~ 434 (813)
+.+
T Consensus 210 ~~~----------------------------------------------------------------------------- 212 (327)
T 2x8j_A 210 DFD----------------------------------------------------------------------------- 212 (327)
T ss_dssp CTT-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 311
Q ss_pred CCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeee
Q 044171 435 ENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHAR 514 (813)
Q Consensus 435 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 514 (813)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhh
Q 044171 515 ARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATP 594 (813)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP 594 (813)
+.++.||++||.+ ||+|||++|+++++ ++.|..++|||||||
T Consensus 213 ---------------~~~~~fS~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP 254 (327)
T 2x8j_A 213 ---------------LRLSDFTNTNEEI-------------DIVAPGVGIKSTYL----------DSGYAELSGTAMAAP 254 (327)
T ss_dssp ---------------CCBSCC---CCCC-------------SEEEECSSEEEECS----------TTCEEEEESGGGTHH
T ss_pred ---------------CCCCCccCCCCCc-------------eEecCcCceEeecC----------CCCEEeecCHHHHHH
Confidence 1368899999865 99999999999984 458999999999999
Q ss_pred HHHHHHHHHHHh-----CCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 595 HIAGVAALIKQR-----HPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 595 ~VAG~aALl~q~-----~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
||||++|||+|+ +|.+++.+||++|++||+++.. +++.||+|++|+.+|++.
T Consensus 255 ~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-----------------------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 255 HVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-----------------------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS-----------------------CHHHHTTCEECTTHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC-----------------------CCCceeeeEECHHHHHHh
Confidence 999999999999 9999999999999999987631 234799999999999863
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=5.2e-49 Score=425.22 Aligned_cols=289 Identities=32% Similarity=0.439 Sum_probs=222.6
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhh
Q 044171 127 LGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAA 206 (813)
Q Consensus 127 ~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~ 206 (813)
++++. +|.. +++|+||+|||||||||++||+|.++ +...++|....
T Consensus 13 i~~~~-~w~~----~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------------~~~~~~~~~~~ 58 (310)
T 2ixt_A 13 IYNND-TLTS----TTGGSGINIAVLDTGVNTSHPDLVNN-----------------------------VEQCKDFTGAT 58 (310)
T ss_dssp HHTCT-TCCC----CCCCTTCEEEEEESCCCTTCTTTTTT-----------------------------EEEEEESSSSS
T ss_pred cCchh-hhhc----cCCCCCcEEEEEecCCCCCCHHHhhc-----------------------------ccccccccCCC
Confidence 44444 7765 68999999999999999999999864 34445554320
Q ss_pred hhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHH
Q 044171 207 IAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQA 285 (813)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a 285 (813)
........|..||||||||||+|.... +...+.||||+|+|+.+|++++.+ +..+++++||+|+
T Consensus 59 --------~~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 123 (310)
T 2ixt_A 59 --------TPINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHA 123 (310)
T ss_dssp --------SCEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHH
Confidence 001123467899999999999987421 123468999999999999998876 7888999999999
Q ss_pred HhCCC-----cEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCC--CCCCCCCCCceEEEeecccCc
Q 044171 286 VEDGV-----DIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPS--SSSILSFSPWITSIAASITDR 358 (813)
Q Consensus 286 ~~~g~-----~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~~~vitVgA~~~~~ 358 (813)
+++++ +|||||||.... ...+..+++++.++|++||+||||+|.. ...+|+..+++|+|||++...
T Consensus 124 ~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~ 196 (310)
T 2ixt_A 124 ADQATATGTKTIISMSLGSSAN-------NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ 196 (310)
T ss_dssp HHHHHHHTCCEEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE
T ss_pred HHhhhccCCCeEEEEcCCCCCC-------CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc
Confidence 99887 999999997542 3567888889999999999999999975 345678889999999854100
Q ss_pred cccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCc
Q 044171 359 KYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDD 438 (813)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~ 438 (813)
.
T Consensus 197 ~------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 197 Q------------------------------------------------------------------------------- 197 (310)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEc
Q 044171 439 ATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARIL 518 (813)
Q Consensus 439 ~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 518 (813)
.
T Consensus 198 ------------------------~------------------------------------------------------- 198 (310)
T 2ixt_A 198 ------------------------N------------------------------------------------------- 198 (310)
T ss_dssp ------------------------T-------------------------------------------------------
T ss_pred ------------------------C-------------------------------------------------------
Confidence 0
Q ss_pred cCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHH
Q 044171 519 DGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAG 598 (813)
Q Consensus 519 ~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG 598 (813)
....++.||++||....- ....++.||||+|||++|+++++ ++.|..++|||||||||||
T Consensus 199 ---------g~~~~~~~S~~G~~~~~g-~~~~~~~~~di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG 258 (310)
T 2ixt_A 199 ---------GTYRVADYSSRGYISTAG-DYVIQEGDIEISAPGSSVYSTWY----------NGGYNTISGTSMATPHVSG 258 (310)
T ss_dssp ---------TEEEECTTSCCCCTTTTT-SSSCCTTCCCEEEECSSEEEECT----------TSSEEEECSHHHHHHHHHH
T ss_pred ---------CCeeeccccCCCCccCCc-cccccCCCeeEECCCCCEeeecC----------CCCEEeeccHHHHHHHHHH
Confidence 000368899999853210 00012459999999999999984 4589999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCc
Q 044171 599 VAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINP 663 (813)
Q Consensus 599 ~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~ 663 (813)
++|||+|++|+|++++||++|++||++++..+.. ...+..+..+|||++|+
T Consensus 259 ~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~--------------~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 259 LAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGY--------------GAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBST--------------TCCSSSBTTTBTCBCCC
T ss_pred HHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCc--------------ccccCCccccccceeec
Confidence 9999999999999999999999999987533210 12345667899999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=3.2e-49 Score=427.97 Aligned_cols=268 Identities=29% Similarity=0.470 Sum_probs=218.6
Q ss_pred ccCCCCCCCCCCCCCCCCCC--CcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEch
Q 044171 126 FLGIPVGVWPTLGGAEFSGE--GVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFA 203 (813)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~G~--gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~ 203 (813)
.++++. +|+. + +|+ ||+|||||||||++||+|.++ +..+++|.
T Consensus 14 ~i~~~~-aw~~----~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------------~~~~~~~~ 58 (320)
T 2z30_A 14 RVKAPS-VWSI----T-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------------IAWCVSTL 58 (320)
T ss_dssp HTTCGG-GTTT----C-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------------EEEEEECG
T ss_pred hcChHH-HHHh----c-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------------cccCcccc
Confidence 455554 7876 3 899 999999999999999999863 44455555
Q ss_pred hhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHH
Q 044171 204 RAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAV 282 (813)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai 282 (813)
.+.. ........|.+||||||||||+|..+. ..+.||||+|+|+.+|+++..+ +..+++++||
T Consensus 59 ~~~~-------~~~~~~~~d~~gHGT~vAgiia~~~n~---------~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai 122 (320)
T 2z30_A 59 RGKV-------STKLRDCADQNGHGTHVIGTIAALNND---------IGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGI 122 (320)
T ss_dssp GGCC-------BCCHHHHBCSSSHHHHHHHHHHCCSSS---------BSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHH
T ss_pred CCcc-------CCCCCCCCCCCCCHHHHHHHHHcccCC---------CceEeeCCCCEEEEEEeeCCCCCccHHHHHHHH
Confidence 4310 000012357889999999999997321 2468999999999999998877 7788999999
Q ss_pred HHHHhC--------------------CCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCC
Q 044171 283 DQAVED--------------------GVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSIL 342 (813)
Q Consensus 283 ~~a~~~--------------------g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~ 342 (813)
+||++. +++|||||||.... ...+..+++++.++|++||+||||+|.....+|
T Consensus 123 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~P 195 (320)
T 2z30_A 123 EQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYP 195 (320)
T ss_dssp HHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBT
T ss_pred HHHHhCcccccccccccccccccccCCceEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCc
Confidence 999987 99999999997542 256778888899999999999999998878889
Q ss_pred CCCCceEEEeecccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCccccc
Q 044171 343 SFSPWITSIAASITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVR 422 (813)
Q Consensus 343 ~~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 422 (813)
+..+++|+|||++.+
T Consensus 196 a~~~~vi~Vga~~~~----------------------------------------------------------------- 210 (320)
T 2z30_A 196 AAYPEVIAVGAIDSN----------------------------------------------------------------- 210 (320)
T ss_dssp TTSTTEEEEEEECTT-----------------------------------------------------------------
T ss_pred ccCCCeEEEEeeCCC-----------------------------------------------------------------
Confidence 999999999985311
Q ss_pred ceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCcc
Q 044171 423 GKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIK 502 (813)
Q Consensus 423 Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~ 502 (813)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCceeeeeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCc
Q 044171 503 SRAGQAVVFHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRN 582 (813)
Q Consensus 503 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~ 582 (813)
+.++.||++|| +|+|||++|+|+++ ++.
T Consensus 211 ---------------------------~~~~~~S~~g~---------------~v~APG~~i~s~~~----------~~~ 238 (320)
T 2z30_A 211 ---------------------------DNIASFSNRQP---------------EVSAPGVDILSTYP----------DDS 238 (320)
T ss_dssp ---------------------------SCBCTTSCSSC---------------SEEEECSSEEEEET----------TTE
T ss_pred ---------------------------CCcCcccCCCC---------------CEEeCCCCeEEecc----------CCC
Confidence 13678999987 67999999999984 358
Q ss_pred ceeeeccCChhhHHHHHHHHHHHhC-------------CCCCHHHHHHHHHccccccCCCCCcccccCCCCCcccccccc
Q 044171 583 FALLSGTSMATPHIAGVAALIKQRH-------------PKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLV 649 (813)
Q Consensus 583 y~~~sGTSMAaP~VAG~aALl~q~~-------------p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (813)
|..++|||||||||||++|||+|++ |.+++.+||++|++||+++...+
T Consensus 239 ~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~g------------------- 299 (320)
T 2z30_A 239 YETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG------------------- 299 (320)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSSS-------------------
T ss_pred eEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCCC-------------------
Confidence 9999999999999999999999999 99999999999999999764322
Q ss_pred CCCCCccCccccCccCcCCC
Q 044171 650 HATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 650 ~~~~~~~GaG~vd~~~A~~~ 669 (813)
.+..||||++|+.+|++.
T Consensus 300 --~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 300 --WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp --SBTTTBTCBCCHHHHHHH
T ss_pred --CCCCcCCceeCHHHHHHH
Confidence 234799999999999863
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.4e-50 Score=432.43 Aligned_cols=273 Identities=25% Similarity=0.352 Sum_probs=215.3
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhh
Q 044171 128 GIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAI 207 (813)
Q Consensus 128 ~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~ 207 (813)
++++ +|+. ...++||+|||||||||++||+|.++.. ....++..+
T Consensus 9 G~~~-aW~~----~~G~~gV~VaViDtGid~~Hpdl~g~~~----------------------------~~~~~~~~~-- 53 (306)
T 4h6w_A 9 GLKK-LWSE----TRGDPKICVAVLDGIVDQNHPCFIGADL----------------------------TRLPSLVSG-- 53 (306)
T ss_dssp THHH-HHHH----CSCCTTCEEEEESSCCCTTSGGGTTCEE----------------------------EECC-------
T ss_pred CHHH-HHhh----hCCCCCCEEEEEcCCCCCCChhHcCCcc----------------------------cCCCcccCC--
Confidence 4444 8887 3345899999999999999999987531 111112111
Q ss_pred hcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC--CCHHHHHHHHHHH
Q 044171 208 AYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG--GYMADVVAAVDQA 285 (813)
Q Consensus 208 ~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g--~~~~~i~~ai~~a 285 (813)
+.....|.+||||||||||+|+.+ +.+.||||+|+|+.+|++.+.+ ....++++||+||
T Consensus 54 ---------~~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a 114 (306)
T 4h6w_A 54 ---------EANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQA 114 (306)
T ss_dssp --------------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHh
Confidence 112234678999999999999743 2468999999999999997643 6777899999999
Q ss_pred HhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCCCceEEEeecccCccccceee
Q 044171 286 VEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSSILSFSPWITSIAASITDRKYNNTIK 365 (813)
Q Consensus 286 ~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~vitVgA~~~~~~~~~~~~ 365 (813)
++++++|||||||...... .....++.+++.+.++|+++|+||||+|.....+|+..+++|+|||++..
T Consensus 115 ~~~g~~vi~~s~g~~~~~~---~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~-------- 183 (306)
T 4h6w_A 115 VNNGANIINVSAGQLTDAG---EADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ-------- 183 (306)
T ss_dssp HHTTCSEEEECCCEEESSS---CCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT--------
T ss_pred hcccceeeeccccccccCC---CccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC--------
Confidence 9999999999999643221 13466888899999999999999999998887888889999999985311
Q ss_pred ecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHH
Q 044171 366 LANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVA 445 (813)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~ 445 (813)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeee
Q 044171 446 DNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIY 525 (813)
Q Consensus 446 ~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 525 (813)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHH
Q 044171 526 HGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQ 605 (813)
Q Consensus 526 ~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q 605 (813)
+.+++||++|+. ..||||+|||++|+|+.+ ++.|..++|||||||||||++|||++
T Consensus 184 ----~~~~~~s~~g~~----------~~~~di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~~All~s 239 (306)
T 4h6w_A 184 ----GKPVDFSNWGDA----------YQKQGILAPGKDILGAKP----------NGGTIRLSGTSFATPIVSGVAALLLS 239 (306)
T ss_dssp ----SCBCSSSCBCHH----------HHHHEEEEECSSEEEECT----------TSCEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ----CCccccccccCC----------cCcceeecCCcCcccccC----------CCceeccCCCcchhHHHHHHHHHHHH
Confidence 135678888875 367899999999999984 45899999999999999999999986
Q ss_pred ----hCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCC
Q 044171 606 ----RHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAID 668 (813)
Q Consensus 606 ----~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~ 668 (813)
++|.++|++||++|++||+++...+. .....||+|+||+.+|++
T Consensus 240 ~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~-------------------~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 240 LQIKRGEKPDPQKVKNALLASATPCNPKDT-------------------DDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp HHHHTTCCCCHHHHHHHHHHTCBCCCTTTC-------------------SCGGGGTTCBCCHHHHHH
T ss_pred HHHhhCCCCCHHHHHHHHHhhCccCCCCCC-------------------CCCCCcceeecCHHHHHH
Confidence 46999999999999999998754332 123479999999999986
No 21
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=8.3e-48 Score=464.04 Aligned_cols=412 Identities=20% Similarity=0.231 Sum_probs=273.3
Q ss_pred CcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCCCCCCC
Q 044171 146 GVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYASPFDAD 225 (813)
Q Consensus 146 gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~d~~ 225 (813)
+|+|||||||+|.+|++.... ..|+...+.+. | .+.+.+..++.++. +......|++
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l--------~~Y~~~~dyg~-F-----~D~v~~~~n~~Ddg---------d~~~~v~D~~ 270 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI--------GEYSRTHETRN-V-----DDFLSISVNVHDEG---------NVLEVVGMSS 270 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE--------ECTTTTCCCCE-E-----SSSCEEEEEEEGGG---------TEEEEEECCC
T ss_pred CEEEEEEeCCCCCCccccccc--------ccccccccccc-c-----ccccCCCCccCCCC---------CccccCCCCC
Confidence 699999999998766654321 01111111110 0 12344444444320 0001124789
Q ss_pred CCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCC---CHHHHHHHHHHHHh-----CCCcEEEEcc
Q 044171 226 GHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGG---YMADVVAAVDQAVE-----DGVDIISLSV 297 (813)
Q Consensus 226 gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~---~~~~i~~ai~~a~~-----~g~~VIn~S~ 297 (813)
||||||||||+|.. + ...+.||||+|+|+.+|+++..++ ..++++.+|.+|++ .|++||||||
T Consensus 271 GHGThVAGIIAa~~-N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~ 341 (1354)
T 3lxu_X 271 PHGTHVSSIASGNH-S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSY 341 (1354)
T ss_dssp HHHHHHHHHHCCCC-S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred CcHHHHHHHHhcCC-C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCC
Confidence 99999999999985 2 134689999999999999987542 45677777777777 7999999999
Q ss_pred CCCCCCCCChhhhhHHHHHHHHHH-hCCcEEEEecCCCCCCCCC--CCCC--CCceEEEeecccCccccceeeecCCcEE
Q 044171 298 GPSAVPSGPAAFLNALEMELLFAT-KAGVLVVQAAGNSGPSSSS--ILSF--SPWITSIAASITDRKYNNTIKLANGHSF 372 (813)
Q Consensus 298 G~~~~~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~~--~~~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (813)
|....... .+.+..++.++. ++|++||+||||+|..... .|+. ++++|+|||++........+..
T Consensus 342 G~~~~~~~----~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 342 GEHANWSN----SGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp CCCCSCSS----CCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred ccCCCCCc----cHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 98754322 245666777775 8999999999999976433 4664 8999999997643211000000
Q ss_pred EeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcC
Q 044171 373 SGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIE 452 (813)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 452 (813)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCee
Q 044171 453 AAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVV 532 (813)
Q Consensus 453 a~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 532 (813)
.....+.+
T Consensus 412 ------------------------------------------------------------------------~~~~~g~~ 419 (1354)
T 3lxu_X 412 ------------------------------------------------------------------------REKLPGNV 419 (1354)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------ccCCCCcc
Confidence 00001357
Q ss_pred eecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHH----hCC
Q 044171 533 ASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQ----RHP 608 (813)
Q Consensus 533 s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~p 608 (813)
+.|||+||+.+ +++||||+|||++|+++... .++.|..++|||||||||||++|||++ ++|
T Consensus 420 asFSS~GPt~d-------g~~KpDIaAPG~~I~St~~~--------~~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P 484 (1354)
T 3lxu_X 420 YTWTSRDPCID-------GGQGVTVCAPGGAIASVPQF--------TMSKSQLMNGTSMAAPHVAGAVALLISGLKQQNI 484 (1354)
T ss_dssp CCCCCCSCCSS-------SSCCEEEEEEC-----------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCCCCcc-------CCCcceEEecCceEEEeecC--------CCCceecCCCCCHHHHHHHHHHHHHHHhhHhhCC
Confidence 99999999986 79999999999999998543 235899999999999999999999986 899
Q ss_pred CCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCCCeeeecchhhHHHhhccCC
Q 044171 609 KWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDPGLIFNAHFQEYVQFLCAVP 688 (813)
Q Consensus 609 ~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~~lv~~~~~~~~~~~~~~~~ 688 (813)
++++.+||++|++||+++.. .+++.||||+||+.+|++....++....+++.|+|.++
T Consensus 485 ~LTp~qVk~lL~~TA~~~~~----------------------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~ 542 (1354)
T 3lxu_X 485 EYSPYSIKRAISVTATKLGY----------------------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVG 542 (1354)
T ss_dssp CCCHHHHHHHHHTTSBCCTT----------------------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEET
T ss_pred CCCHHHHHHHHHHhCccCCC----------------------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEec
Confidence 99999999999999987642 23458999999999999988888888888999999887
Q ss_pred CCCccceeeecccCccCCCCCCCCCCCCCcEEEeccCccEEEEEEEEecC-------C-CCeeEEEEEeCCCC-cEEEEe
Q 044171 689 GVDDDYVRRVTGYGCPTENQGWCSDLNTPSITISNLVGSRKVIRRVRNVS-------S-ANETYTVTVKEPSG-VKVSVS 759 (813)
Q Consensus 689 ~~~~~~i~~~~~~~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~~tv~N~~-------~-~~~ty~~~~~~~~g-~~v~~~ 759 (813)
..+...|...... .....+++++|+-.- + ....|.+.+..... --|+.
T Consensus 543 ~~~~rgIylR~~~----------------------~~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~wv~~- 599 (1354)
T 3lxu_X 543 NNADKGIHLRQGV----------------------QRNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQPWVQC- 599 (1354)
T ss_dssp TTTBSSEEECSSC----------------------CCSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESSTTEEE-
T ss_pred CCCCCceEEeccc----------------------cCCceEEEEEEeeeecCcccCChhhccceEEEEEEecCCCceec-
Confidence 5444444332210 012334444443221 1 12222222221111 12333
Q ss_pred cCeEEEecCcEEEEEEEEEEecCCCCeEEEEEEEEe----CCcceEEEeEEEEEecc
Q 044171 760 PQVFKIRGLASRELKIVLKATNSTRAYSFGAMVLQG----NNNHIIRIPIAVYVSTS 812 (813)
Q Consensus 760 ~~~~~v~~g~~~~~~vt~~~~~~~~~~~~G~i~~~~----~~~~~l~~P~~~~~~~~ 812 (813)
|+.+.| .++.++|.|++++.....+.+++.|..-. .-++.+|||+.+..+..
T Consensus 600 p~~l~l-~~~~r~~~v~vDp~~L~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P~~ 655 (1354)
T 3lxu_X 600 GAFLDL-SYGTRSIAVRVDPTGLQPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQPHV 655 (1354)
T ss_dssp CSCEEC-TTSCEEEEEEECGGGCCSEEEEEEEEEEESSCTTSCCSEEEEEEEEECBC
T ss_pred ccceee-cCCCceEEEEECCCCCCCcceeEEEEEEEcCCcccCceEEeeEEEEeeee
Confidence 777777 78999999999999888888999998764 24689999999987654
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.2e-48 Score=428.97 Aligned_cols=274 Identities=19% Similarity=0.149 Sum_probs=217.0
Q ss_pred ccCCCCCCCCCCCCCCCCCC--CcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEch
Q 044171 126 FLGIPVGVWPTLGGAEFSGE--GVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFA 203 (813)
Q Consensus 126 ~~~~~~~~w~~~~~~~~~G~--gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~ 203 (813)
.++++. +|+. ++|+ ||+||||||||| +||+|.++ ++.+++|.
T Consensus 29 ~i~~~~-aw~~-----~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------------~~~~~~~~ 72 (347)
T 2iy9_A 29 AIGLTE-TTMS-----LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------------EFAKFSFT 72 (347)
T ss_dssp HHTCCH-HHHH-----TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------------EEEEEECB
T ss_pred hCChHH-HHHH-----hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------------cccCCccc
Confidence 345544 7776 6899 999999999999 99999864 44455554
Q ss_pred hhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHHHHHHH
Q 044171 204 RAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADVVAAVD 283 (813)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~ 283 (813)
.+. ...+...+.|..||||||||||+|.. ++.||||+|+|+.+|++++.+.. ++++||+
T Consensus 73 ~~~-------~~~~~~~~~d~~gHGT~vAgiia~~~------------g~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~ 131 (347)
T 2iy9_A 73 QDG-------SPFPVKKSEALYIHGTAMASLIASRY------------GIYGVYPHALISSRRVIPDGVQD--SWIRAIE 131 (347)
T ss_dssp TTC-------CSSCCSSSHHHHHHHHHHHHHHHCSS------------SSCCSSTTCEEEEEECCSSBCTT--HHHHHHH
T ss_pred CCC-------CCCCCCCCCCCCCcHHHHHHHHhccc------------CCcccCCCCEEEEEEEecCCCHH--HHHHHHH
Confidence 320 00111244578899999999999971 25799999999999999875533 9999999
Q ss_pred HHHhC------CCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCC-------CCCCCCCCC----
Q 044171 284 QAVED------GVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPS-------SSSILSFSP---- 346 (813)
Q Consensus 284 ~a~~~------g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~~---- 346 (813)
||+++ |++|||||||..... ...+.+..+++.+.++|++||+||||+|.. ...+|+..+
T Consensus 132 ~a~~~~~~~~~~~~Vin~S~G~~~~~----~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~ 207 (347)
T 2iy9_A 132 SIMSNVFLAPGEEKIINISGGQKGVA----SASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSS 207 (347)
T ss_dssp HHHTCTTSCTTEEEEEEESSCBCCC-----CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSH
T ss_pred HHHhhhhcccCCceEEEeccccCCCC----CcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccc
Confidence 99999 999999999975422 235678889999999999999999999975 346777788
Q ss_pred ------ceEEEeeccc--CccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCc
Q 044171 347 ------WITSIAASIT--DRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIP 418 (813)
Q Consensus 347 ------~vitVgA~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 418 (813)
++|+|||++. +....
T Consensus 208 ~~~~~~~vi~Vga~~~~~~g~~~--------------------------------------------------------- 230 (347)
T 2iy9_A 208 VNKKQDPVIRVAALAQYRKGETP--------------------------------------------------------- 230 (347)
T ss_dssp HHHHTCCEEEEEEECCCCTTSCC---------------------------------------------------------
T ss_pred cccccCCEEEEEEcccCCCCcee---------------------------------------------------------
Confidence 9999999653 11000
Q ss_pred ccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhh
Q 044171 419 ALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNS 498 (813)
Q Consensus 419 ~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~ 498 (813)
T Consensus 231 -------------------------------------------------------------------------------- 230 (347)
T 2iy9_A 231 -------------------------------------------------------------------------------- 230 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccCCCCceeeeeeeEEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCC
Q 044171 499 HTIKSRAGQAVVFHARARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNL 578 (813)
Q Consensus 499 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~ 578 (813)
...+.++.||++||+ ||||+|||++|+++++
T Consensus 231 ----------------------------~~~~~~~~fS~~G~~------------~~di~APG~~i~s~~~--------- 261 (347)
T 2iy9_A 231 ----------------------------VLHGGGITGSRFGNN------------WVDIAAPGQNITFLRP--------- 261 (347)
T ss_dssp ----------------------------CBCCCSSSCBCBCTT------------TCSEEEECSSEEEECT---------
T ss_pred ----------------------------cccCCCCCCCCCCCC------------CCEEEeCCCCeEeecC---------
Confidence 000135799999983 4599999999999984
Q ss_pred CCCcceeeeccCChhhHHHHHHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCc
Q 044171 579 KGRNFALLSGTSMATPHIAGVAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGA 658 (813)
Q Consensus 579 ~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga 658 (813)
++.|..++|||||||||||++|||+|++|++++.+||++|++||+++...+ ...+|+
T Consensus 262 -~~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~----------------------~~~~G~ 318 (347)
T 2iy9_A 262 -DAKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV----------------------DKVTEG 318 (347)
T ss_dssp -TSCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT----------------------TTSGGG
T ss_pred -CCCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC----------------------CccccC
Confidence 458999999999999999999999999999999999999999999864321 248999
Q ss_pred cccCccCcCCC
Q 044171 659 GFINPARAIDP 669 (813)
Q Consensus 659 G~vd~~~A~~~ 669 (813)
|++|+.+|++.
T Consensus 319 G~ld~~~A~~~ 329 (347)
T 2iy9_A 319 RVLNAEKAISM 329 (347)
T ss_dssp EECCHHHHHHH
T ss_pred CEecHHHHHHH
Confidence 99999999964
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.1e-47 Score=433.72 Aligned_cols=293 Identities=26% Similarity=0.363 Sum_probs=222.3
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEEeeccCC------CCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEE
Q 044171 127 LGIPVGVWPTLGGAEFSGEGVVIGFIDTGINP------EHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQ 200 (813)
Q Consensus 127 ~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~------~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~ 200 (813)
++++. +|.. .+++|+||+|||||||||. .||+|.++ +...+
T Consensus 8 i~~~~-~~~~---~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------------i~~~~ 54 (434)
T 1wmd_A 8 VKADV-AQSS---YGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------------ITALY 54 (434)
T ss_dssp TTHHH-HHHH---HCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------------EEEEE
T ss_pred hCchh-hhhc---cCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------------Eeeec
Confidence 44443 6652 2689999999999999999 79999853 44455
Q ss_pred EchhhhhhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCC---CHHH
Q 044171 201 YFARAAIAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGG---YMAD 277 (813)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~---~~~~ 277 (813)
+|.+. ..+.|.+||||||||||+|+.. .+.||||+|+|+.+|+++..+. ..++
T Consensus 55 ~~~~~-------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~ 110 (434)
T 1wmd_A 55 ALGRT-------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSN 110 (434)
T ss_dssp ETTTT-------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSS
T ss_pred cccCC-------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHH
Confidence 55432 3456889999999999999632 2579999999999999987652 4568
Q ss_pred HHHHHHHHHhCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHH-HhCCcEEEEecCCCCCCC--CCCCCCCCceEEEeec
Q 044171 278 VVAAVDQAVEDGVDIISLSVGPSAVPSGPAAFLNALEMELLFA-TKAGVLVVQAAGNSGPSS--SSILSFSPWITSIAAS 354 (813)
Q Consensus 278 i~~ai~~a~~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~~~vitVgA~ 354 (813)
+.++|++|+++|++|||||||..... .+ .....+++++ .++|++||+||||+|... ...|+.++++|+|||+
T Consensus 111 ~~~ai~~a~~~g~~Vin~S~G~~~~~-~~----~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~ 185 (434)
T 1wmd_A 111 LQTLFSQAYSAGARIHTNSWGAAVNG-AY----TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGAT 185 (434)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBCCTT-CC----CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEE
T ss_pred HHHHHHHHHhcCCeEEEecCCCCcCC-cC----CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecc
Confidence 99999999999999999999976421 11 2233444444 589999999999999764 3567889999999997
Q ss_pred ccCccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCC
Q 044171 355 ITDRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDF 434 (813)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~ 434 (813)
+..+...
T Consensus 186 ~~~~~~~------------------------------------------------------------------------- 192 (434)
T 1wmd_A 186 ENLRPSF------------------------------------------------------------------------- 192 (434)
T ss_dssp CCSCGGG-------------------------------------------------------------------------
T ss_pred cccCccc-------------------------------------------------------------------------
Confidence 5321100
Q ss_pred CCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeee
Q 044171 435 ENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHAR 514 (813)
Q Consensus 435 ~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~ 514 (813)
+.
T Consensus 193 --~~---------------------------------------------------------------------------- 194 (434)
T 1wmd_A 193 --GS---------------------------------------------------------------------------- 194 (434)
T ss_dssp --CG----------------------------------------------------------------------------
T ss_pred --Cc----------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCC--CCCCCcceeeeccCCh
Q 044171 515 ARILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDP--NLKGRNFALLSGTSMA 592 (813)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~--~~~~~~y~~~sGTSMA 592 (813)
+....+.+++||++||+.+ +++||||+|||++|+++.+....... ...++.|..++|||||
T Consensus 195 ----------~~~~~~~~a~fS~~G~~~~-------g~~kpdi~ApG~~i~s~~~~~~~~~~~~~~~~~~~~~~sGTS~A 257 (434)
T 1wmd_A 195 ----------YADNINHVAQFSSRGPTKD-------GRIKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMGGTSMA 257 (434)
T ss_dssp ----------GGSCTTSBCTTSCCCCCTT-------SCCCCCEEEECSSEEEECCTTCCGGGSSEEEETTEEEECSHHHH
T ss_pred ----------ccCCCCccccccCCCCCCC-------CCCCceEEcCCCCeEecCCCCCCCcccccCCCCceEeecchhHH
Confidence 0001235899999999986 89999999999999999864221000 0014589999999999
Q ss_pred hhHHHHHHHHHHHhCCCC-----CHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcC
Q 044171 593 TPHIAGVAALIKQRHPKW-----SPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAI 667 (813)
Q Consensus 593 aP~VAG~aALl~q~~p~~-----s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~ 667 (813)
||||||++|||+|++|++ ++++||++|++||+++.. ..+++.||||++|+.+|+
T Consensus 258 aP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~---------------------~~~~~~~G~G~vd~~~a~ 316 (434)
T 1wmd_A 258 TPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL---------------------GYPNGNQGWGRVTLDKSL 316 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS---------------------CSSCTTTTTCBCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC---------------------CCCCccCCcCeEeHHHhc
Confidence 999999999999999875 899999999999987531 234568999999999999
Q ss_pred CCC
Q 044171 668 DPG 670 (813)
Q Consensus 668 ~~~ 670 (813)
+..
T Consensus 317 ~~~ 319 (434)
T 1wmd_A 317 NVA 319 (434)
T ss_dssp TCE
T ss_pred ccc
Confidence 754
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=7.5e-48 Score=421.81 Aligned_cols=298 Identities=26% Similarity=0.389 Sum_probs=217.9
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccc-cCCCCCCCCCCCceEEEEEchhhhhhcCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCT-TGNRFPSTACNSKIVGAQYFARAAIAYGD 211 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~ki~g~~~~~~~~~~~~~ 211 (813)
+|+. +++|+||+||||||||+ +||+|.++....++.... .... .+.... ...... .++.+.. ..
T Consensus 24 aw~~----g~~G~gV~VaViDtGi~-~hp~l~~~~~~~~~~~~~--~~~~~d~~~~~----~~~~~~-~~~~~~~---~~ 88 (340)
T 3lpc_A 24 VWDM----GFTGQNVVVAVVDTGIL-HHRDLNANVLPGYDFISN--SQISLDGDGRD----ADPFDE-GDWFDNW---AC 88 (340)
T ss_dssp HHHH----TCSCTTCEEEEEESCBC-CCTTTGGGBCCCEECCCC--HHHHCSSSSSB----SCCBCC-CCCBCTT---TT
T ss_pred HHHh----cCCCCCeEEEEEcCCCC-CChhhhcccccCccccCC--ccccccCCCcc----CCcccc-ccccccc---cc
Confidence 6766 78999999999999998 999999764332211110 0000 000000 000000 0000000 00
Q ss_pred CCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHHHHHHHHHHh----
Q 044171 212 FNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADVVAAVDQAVE---- 287 (813)
Q Consensus 212 ~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---- 287 (813)
.....+.....|.+||||||||||+|...+. .++.||||+|+|+.+|+++..++..++++++|+|+++
T Consensus 89 ~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~ 160 (340)
T 3lpc_A 89 GGRPDPRKERSDSSWHGSHVAGTIAAVTNNR--------IGVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIA 160 (340)
T ss_dssp SCTTCGGGSCBCCCCHHHHHHHHHHCCCSSS--------SSCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCT
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHccCCCC--------CcceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccc
Confidence 0011112335688999999999999975422 2468999999999999999887888999999999998
Q ss_pred ------CCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEEeecccCccc
Q 044171 288 ------DGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSS-SILSFSPWITSIAASITDRKY 360 (813)
Q Consensus 288 ------~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~ 360 (813)
.+++|||||||.... ....++.+++++.++|++||+||||+|.... .+|+..+++|+|||++.+
T Consensus 161 ~~~~~~~~~~Vin~S~G~~~~------~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--- 231 (340)
T 3lpc_A 161 GIPENRNPAKVINMSLGSDGQ------CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR--- 231 (340)
T ss_dssp TSCCCSSCCSEEEECCCEESC------CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT---
T ss_pred ccccccCCCeEEEeCcCCCCC------cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC---
Confidence 899999999997432 2356778888999999999999999987643 467888999999985311
Q ss_pred cceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchh
Q 044171 361 NNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDAT 440 (813)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~ 440 (813)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccC
Q 044171 441 IATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDG 520 (813)
Q Consensus 441 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 520 (813)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHH
Q 044171 521 RRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVA 600 (813)
Q Consensus 521 ~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~a 600 (813)
+.++.||++||.+ ||+|||++|+++++..... ...+.|..++|||||||||||++
T Consensus 232 ---------~~~~~~S~~g~~~-------------di~ApG~~i~s~~~~~~~~---~~~~~~~~~sGTS~AaP~vaG~a 286 (340)
T 3lpc_A 232 ---------GIRASFSNYGVDV-------------DLAAPGQDILSTVDSGTRR---PVSDAYSFMAGTSMATPHVSGVA 286 (340)
T ss_dssp ---------SSBCTTCCBSTTC-------------CEEEECSSEEEEEESCSSS---CCSEEEEEECSHHHHHHHHHHHH
T ss_pred ---------CCcCCCCCCCCCc-------------eEEecCCCeecccCCCCcC---CCCCcceecccHhHHHHHHHHHH
Confidence 2368899999754 9999999999998654321 12346999999999999999999
Q ss_pred HHHHHh-C---CCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 601 ALIKQR-H---PKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 601 ALl~q~-~---p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
|||+|+ + |.+++++||++|++||+++.. .++..||||+||+.+|++.
T Consensus 287 All~~~~~~~~p~lt~~~v~~~L~~tA~~~~~----------------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 287 ALVISAANSVNKNLTPAELKDVLVSTTSPFNG----------------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS----------------------CCSSCCCSSBCCHHHHHHH
T ss_pred HHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC----------------------CCCCCcccceecHHHHHHH
Confidence 999998 5 999999999999999987631 1234899999999999864
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2e-46 Score=398.02 Aligned_cols=233 Identities=32% Similarity=0.488 Sum_probs=199.0
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|.++ +..+++|.+.
T Consensus 21 aw~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~------- 60 (284)
T 1sh7_A 21 NYNA----NFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------------SVSGYDFVDN------- 60 (284)
T ss_dssp BCCC----SCCCTTCEEEEEESCCCTTCTTTTTC-----------------------------EEEEEETTTT-------
T ss_pred hhhc----CCCCCCCEEEEEcCCCCCCChhHcCC-----------------------------ccccccccCC-------
Confidence 6665 68999999999999999999999863 4455666543
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC--C
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED--G 289 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g 289 (813)
...+.|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|++++ +
T Consensus 61 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~ 121 (284)
T 1sh7_A 61 -----DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASG 121 (284)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCS
T ss_pred -----CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCC
Confidence 1245688999999999999872 5999999999999998876 7888999999999984 7
Q ss_pred CcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceEEEeecccCccccceeeecC
Q 044171 290 VDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS-SSILSFSPWITSIAASITDRKYNNTIKLAN 368 (813)
Q Consensus 290 ~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVgA~~~~~~~~~~~~~~~ 368 (813)
++|||||||... .+.++.+++++.++|++||+||||+|... ...|+..+++|+|||++.+
T Consensus 122 ~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 182 (284)
T 1sh7_A 122 PSVANMSLGGGQ--------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS----------- 182 (284)
T ss_dssp SEEEEECCCBSC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-----------
T ss_pred CcEEEeCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-----------
Confidence 999999999752 25788888999999999999999999754 3467888999999985311
Q ss_pred CcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHH
Q 044171 369 GHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNI 448 (813)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 448 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCC
Q 044171 449 KKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQ 528 (813)
Q Consensus 449 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 528 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCC
Q 044171 529 APVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHP 608 (813)
Q Consensus 529 ~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p 608 (813)
+.++.||++||.. ||+|||++|+++++ ++.|..++|||||||||||++|||+|++|
T Consensus 183 -~~~~~~S~~G~~~-------------di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 238 (284)
T 1sh7_A 183 -DSRSSFSNWGSCV-------------DLFAPGSQIKSAWY----------DGGYKTISGTSMATPHVAGVAALYLQENN 238 (284)
T ss_dssp -SBBCTTCCBSTTC-------------CEEEECSSEEEECT----------TSSEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCcCcccCCCCcc-------------EEEeccCCeEEecC----------CCCEEEccChHHHHHHHHHHHHHHHHHCC
Confidence 2368899999875 99999999999974 34899999999999999999999999999
Q ss_pred CCCHHHHHHHHHccccccC
Q 044171 609 KWSPAAITSAMMTSAEVTD 627 (813)
Q Consensus 609 ~~s~~~ik~~L~~TA~~~~ 627 (813)
++++++||++|++||++..
T Consensus 239 ~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 239 GLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp TCCHHHHHHHHHHHSEESC
T ss_pred CCCHHHHHHHHHhhCccCC
Confidence 9999999999999998753
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.5e-46 Score=397.95 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=192.6
Q ss_pred CCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCCC
Q 044171 142 FSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYASP 221 (813)
Q Consensus 142 ~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (813)
.+|+||+|||||||||++||+|.++ +..+++|. ..+
T Consensus 28 ~~G~gv~VaViDsGvd~~H~~l~~~-----------------------------~~~~~~~~---------------~~~ 63 (279)
T 2pwa_A 28 SAGQGSCVYVIDTGIEASHPEFEGR-----------------------------AQMVKTYY---------------YSS 63 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEESS---------------SCS
T ss_pred CCCCCCEEEEEeCCCCCCChhHhCc-----------------------------cccccCCC---------------CCC
Confidence 7999999999999999999999863 33445543 124
Q ss_pred CCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhCCC-------cEE
Q 044171 222 FDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVEDGV-------DII 293 (813)
Q Consensus 222 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-------~VI 293 (813)
.|.+||||||||||+|. ..||||+|+|+.+|++++.+ +..+++++||+|++++++ +||
T Consensus 64 ~d~~gHGT~vAgiia~~--------------~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vi 129 (279)
T 2pwa_A 64 RDGNGHGTHCAGTVGSR--------------TYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVA 129 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCCHHHHHHHHHhc--------------ccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEE
Confidence 57899999999999986 26999999999999999877 788999999999999887 999
Q ss_pred EEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEEeecccCccccceeeecCCcEE
Q 044171 294 SLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSS-SILSFSPWITSIAASITDRKYNNTIKLANGHSF 372 (813)
Q Consensus 294 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (813)
|||||.. ..+.++.+++++.++|++||+||||+|.... .+|+..+++|+|||++.+
T Consensus 130 n~S~G~~--------~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------- 186 (279)
T 2pwa_A 130 SLSLGGG--------YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------------- 186 (279)
T ss_dssp EECCCEE--------CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------
T ss_pred EecCCCC--------CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------------
Confidence 9999964 2367888899999999999999999997643 457888999999985311
Q ss_pred EeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcC
Q 044171 373 SGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIE 452 (813)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 452 (813)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCee
Q 044171 453 AAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVV 532 (813)
Q Consensus 453 a~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 532 (813)
+.+
T Consensus 187 -----------------------------------------------------------------------------~~~ 189 (279)
T 2pwa_A 187 -----------------------------------------------------------------------------DRR 189 (279)
T ss_dssp -----------------------------------------------------------------------------SBB
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 236
Q ss_pred eecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCCH
Q 044171 533 ASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWSP 612 (813)
Q Consensus 533 s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~ 612 (813)
+.||++||.+ ||+|||++|+++++ ++.|..++|||||||||||++|||+|+ |++++
T Consensus 190 ~~~S~~G~~~-------------di~APG~~i~s~~~----------~~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~ 245 (279)
T 2pwa_A 190 SSFSNYGSVL-------------DIFGPGTDILSTWI----------GGSTRSISGTSMATPHVAGLAAYLMTL-GKTTA 245 (279)
T ss_dssp CTTCCBSTTC-------------CEEEECSSEEEEET----------TTEEEEECSHHHHHHHHHHHHHHHHHT-TSCCT
T ss_pred CCcCCCCCcc-------------eEEEecCCeEEeec----------CCCEEEcCChHHHHHHHHHHHHHHHhC-CCCCH
Confidence 8899999865 99999999999984 348999999999999999999999999 99999
Q ss_pred HHHHHHHHcccccc
Q 044171 613 AAITSAMMTSAEVT 626 (813)
Q Consensus 613 ~~ik~~L~~TA~~~ 626 (813)
.+||++|++||++.
T Consensus 246 ~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 246 ASACRYIADTANKG 259 (279)
T ss_dssp TTHHHHHHHHSEES
T ss_pred HHHHHHHHHhCccc
Confidence 99999999999875
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=6.3e-46 Score=393.97 Aligned_cols=233 Identities=31% Similarity=0.443 Sum_probs=199.0
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|.++ +...++|..
T Consensus 23 a~~~----~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~-------- 61 (276)
T 4dzt_A 23 SYTY----TATGRGVNVYVIDTGIRTTHREFGGR-----------------------------ARVGYDALG-------- 61 (276)
T ss_dssp CEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTS--------
T ss_pred ceec----CCCCCCcEEEEEccCCCCCChhHccC-----------------------------eeccccCCC--------
Confidence 6665 78999999999999999999999863 344445432
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC--C
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED--G 289 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g 289 (813)
..+.|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..++++++++|+++. +
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~ 121 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRR 121 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCS
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCC
Confidence 234578899999999999872 5999999999999999877 7888999999999997 8
Q ss_pred CcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CCCCCCceEEEeecccCccccceeeecC
Q 044171 290 VDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSS-ILSFSPWITSIAASITDRKYNNTIKLAN 368 (813)
Q Consensus 290 ~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~~~ 368 (813)
++|||||||... .+.++.+++++.++|+++|+||||+|..... .|+..+++|+|||++.+
T Consensus 122 ~~vin~S~g~~~--------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 182 (276)
T 4dzt_A 122 PAVANMSLGGGV--------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS----------- 182 (276)
T ss_dssp SEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------
T ss_pred CeEEEECCCCCC--------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-----------
Confidence 999999999642 3678889999999999999999999976543 37888999999984311
Q ss_pred CcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHH
Q 044171 369 GHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNI 448 (813)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 448 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCC
Q 044171 449 KKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQ 528 (813)
Q Consensus 449 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 528 (813)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCC
Q 044171 529 APVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHP 608 (813)
Q Consensus 529 ~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p 608 (813)
+.++.||++||.. ||+|||++|++++... +..|..++|||||||||||++|||+|++|
T Consensus 183 -~~~~~~S~~g~~~-------------dv~ApG~~i~s~~~~~--------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 240 (276)
T 4dzt_A 183 -DARASFSNYGSCV-------------DLFAPGASIPSAWYTS--------DTATQTLNGTSMATPHVAGVAALYLEQNP 240 (276)
T ss_dssp -SBBCTTCCBSTTC-------------CEEEECSSEEEECTTS--------SSCEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCcCCcCCCCCCc-------------eEEeCCCCeEccccCC--------CCceEEeeEHHHHHHHHHHHHHHHHHHCC
Confidence 2368899999976 8999999999998642 34799999999999999999999999999
Q ss_pred CCCHHHHHHHHHccccccC
Q 044171 609 KWSPAAITSAMMTSAEVTD 627 (813)
Q Consensus 609 ~~s~~~ik~~L~~TA~~~~ 627 (813)
++++++||++|++||++..
T Consensus 241 ~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 241 SATPASVASAILNGATTGR 259 (276)
T ss_dssp TCCHHHHHHHHHHHSEESC
T ss_pred CCCHHHHHHHHHhhCcCCc
Confidence 9999999999999999864
No 28
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=7.4e-46 Score=393.24 Aligned_cols=234 Identities=31% Similarity=0.456 Sum_probs=198.4
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|.++ +..+++|.++
T Consensus 23 ~~~~----~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------------~~~~~d~~~~------- 62 (278)
T 2b6n_A 23 NYHT----DYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------------ASSGYDFIDN------- 62 (278)
T ss_dssp EEEC----SCCCTTCEEEEEESCCCTTCGGGTTC-----------------------------EEEEEETTTT-------
T ss_pred hccc----CCCCCCCEEEEEeCCCCCCChhHhcc-----------------------------cccCeecCCC-------
Confidence 5665 68999999999999999999999863 3445566542
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHh--CC
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVE--DG 289 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~--~g 289 (813)
...+.|.+||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++ .+
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g 123 (278)
T 2b6n_A 63 -----DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASG 123 (278)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCS
T ss_pred -----CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCC
Confidence 1345688999999999999862 5999999999999999876 788899999999998 59
Q ss_pred CcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCCCceEEEeecccCccccceeeecC
Q 044171 290 VDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSS-SILSFSPWITSIAASITDRKYNNTIKLAN 368 (813)
Q Consensus 290 ~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~~~vitVgA~~~~~~~~~~~~~~~ 368 (813)
++|||||||... .+.++.+++++.++|++||+||||+|.... ..|+..+++|+|||++.+
T Consensus 124 ~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------- 184 (278)
T 2b6n_A 124 PAVANMSLGGGA--------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN----------- 184 (278)
T ss_dssp SEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------
T ss_pred CeEEEECCCCCc--------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-----------
Confidence 999999999743 256788888999999999999999997643 357788999999985311
Q ss_pred CcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHH
Q 044171 369 GHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNI 448 (813)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~ 448 (813)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCC
Q 044171 449 KKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQ 528 (813)
Q Consensus 449 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 528 (813)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCC
Q 044171 529 APVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHP 608 (813)
Q Consensus 529 ~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p 608 (813)
+.++.||++||.. ||+|||++|++++... ++.|..++|||||||||||++|||+|++|
T Consensus 185 -~~~~~~S~~G~~~-------------di~ApG~~i~s~~~~~--------~~~~~~~sGTS~AaP~vaG~aAll~~~~p 242 (278)
T 2b6n_A 185 -DSRSSFSNYGTCL-------------DIYAPGSSITSSWYTS--------NSATNTISGTSMASPHVAGVAALYLDENP 242 (278)
T ss_dssp -SBBCTTCCBSTTC-------------CEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCcCCcCCCCCCC-------------eEEeCCCCeECcccCC--------CCCEEEeCcHHHHHHHHHHHHHHHHHhCC
Confidence 2367899999865 9999999999998542 34899999999999999999999999999
Q ss_pred CCCHHHHHHHHHcccccc
Q 044171 609 KWSPAAITSAMMTSAEVT 626 (813)
Q Consensus 609 ~~s~~~ik~~L~~TA~~~ 626 (813)
++++++||++|++||++.
T Consensus 243 ~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 243 NLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp TCCHHHHHHHHHHHSEES
T ss_pred CCCHHHHHHHHHHhCccC
Confidence 999999999999999864
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.1e-45 Score=420.90 Aligned_cols=296 Identities=19% Similarity=0.224 Sum_probs=212.2
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhh
Q 044171 127 LGIPVGVWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAA 206 (813)
Q Consensus 127 ~~~~~~~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~ 206 (813)
++++. +|.. +++|+||+|||||||||++||+|.++... ...++|.+.
T Consensus 25 i~~~~-aw~~----g~~G~gv~VaViDtGvd~~Hpdl~~~~~~---------------------------~~~~d~~~~- 71 (471)
T 1p8j_A 25 LNVKE-AWAQ----GFTGHGIVVSILDDGIEKNHPDLAGNYDP---------------------------GASFDVNDQ- 71 (471)
T ss_dssp CCCHH-HHHT----TCSCTTCEEEEEEBCCCTTCTTTGGGBCG---------------------------GGCEETTTT-
T ss_pred CChHH-HHhc----CCCCCCCEEEEEeCCcCCCChhHhhccCc---------------------------cCcccccCC-
Confidence 34333 6665 78999999999999999999999975311 012333322
Q ss_pred hhcCCCCCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHHHHHHHHHH
Q 044171 207 IAYGDFNSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADVVAAVDQAV 286 (813)
Q Consensus 207 ~~~~~~~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~ 286 (813)
.+...+...+.|.++|||||||||+|..+++ ..+.||||+|+|+.+|+++ +..+++++|+++++
T Consensus 72 -----~~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~--------~g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~ 135 (471)
T 1p8j_A 72 -----DPDPQPRYTQMNDNRHGTRCAGEVAAVANNG--------VCGVGVAYNARIGGVRMLD---GEVTDAVEARSLGL 135 (471)
T ss_dssp -----BSCCCCCCCTTCTTCHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTS
T ss_pred -----CCCCCCccCCCCCCCcHHHHHHHHHeeccCC--------CCCEEECCCCeEEEEEccC---CchhHHHHHHHhhh
Confidence 0011111235688999999999999975322 2358999999999999986 45678999999999
Q ss_pred h-CCCcEEEEccCCCCCCC---C-ChhhhhHHHHHHHHHH-hCCcEEEEecCCCCCCCCC----CCCCCCceEEEeeccc
Q 044171 287 E-DGVDIISLSVGPSAVPS---G-PAAFLNALEMELLFAT-KAGVLVVQAAGNSGPSSSS----ILSFSPWITSIAASIT 356 (813)
Q Consensus 287 ~-~g~~VIn~S~G~~~~~~---~-~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~----~~~~~~~vitVgA~~~ 356 (813)
+ ++++|||||||...... + .....+.+..++.+++ .+|++||+||||+|..... ....++++|+|||++.
T Consensus 136 ~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~ 215 (471)
T 1p8j_A 136 NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ 215 (471)
T ss_dssp CTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT
T ss_pred ccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC
Confidence 9 99999999999754211 1 1222333444443332 4799999999999975321 1234588999998531
Q ss_pred CccccceeeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCC
Q 044171 357 DRKYNNTIKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFEN 436 (813)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~ 436 (813)
+
T Consensus 216 ~------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 216 F------------------------------------------------------------------------------- 216 (471)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEE
Q 044171 437 DDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARAR 516 (813)
Q Consensus 437 g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~ 516 (813)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EccCeeeeecCCCCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHH
Q 044171 517 ILDGRRAIYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHI 596 (813)
Q Consensus 517 ~~~~~~~~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~V 596 (813)
+.++.||++||... ...+|...+||.+|+++... ++.|..++|||||||||
T Consensus 217 -------------g~~a~~S~~g~~~~-------~~~~~~~~~~g~~i~st~~~---------~~~~~~~sGTS~AaP~V 267 (471)
T 1p8j_A 217 -------------GNVPWYSEACSSTL-------ATTYSSGNQNEKQIVTTDLR---------QKCTESHTGTSASAPLA 267 (471)
T ss_dssp -------------SCCCTTCCBCTTCC-------EEEECCCSTTSCCEEEEETT---------TEEEEEECSHHHHHHHH
T ss_pred -------------CCcccccCCCCcce-------EEeCCCCCCCCCCEEEeeCC---------CCccccCCCcccccchh
Confidence 23678999999875 24566667778899999742 34799999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 597 AGVAALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 597 AG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
||++|||+|++|+|++++||++|++||++++......... ......+..||||+||+.+|++.
T Consensus 268 AG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n----------~~g~~~~~~~G~G~vda~~Av~~ 330 (471)
T 1p8j_A 268 AGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATN----------GVGRKVSHSYGYGLLDAGAMVAL 330 (471)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEEC----------TTSCEEBTTTBTCBCCHHHHHHH
T ss_pred hhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceec----------CCCcccCCCCCCEEEcHhHHHHH
Confidence 9999999999999999999999999999875432111000 00112345899999999999964
No 30
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=5.8e-45 Score=409.67 Aligned_cols=282 Identities=21% Similarity=0.253 Sum_probs=203.2
Q ss_pred CCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCC
Q 044171 141 EFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYAS 220 (813)
Q Consensus 141 ~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~ 220 (813)
+++|+||+|||||||||++||+|.++.. ...+++..+ .+.......
T Consensus 22 ~~tG~GV~VaVIDTGId~~HpdL~gr~~----------------------------~~~~~~v~~------~dg~~f~~~ 67 (546)
T 2qtw_B 22 PDGGSLVEVYLLDTSIQSDHREIEGRVM----------------------------VTDFENVPE------EDGTRFHRQ 67 (546)
T ss_dssp --CCTTSEEEEEESCCCTTSTTTTTTEE----------------------------EEEEECCCC------CC-------
T ss_pred CCCCCCcEEEEECCCCCCCChHHccccc----------------------------ccCcccccC------CCCccccCC
Confidence 6899999999999999999999997521 111111100 000000123
Q ss_pred CCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhC------CCcEE
Q 044171 221 PFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVED------GVDII 293 (813)
Q Consensus 221 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~~VI 293 (813)
+.|.+||||||||||+|.. .||||+|+|+.+|++++.+ ++.+++++||+|+++. +++||
T Consensus 68 ~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VI 133 (546)
T 2qtw_B 68 ASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVV 133 (546)
T ss_dssp CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEE
T ss_pred CCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEE
Confidence 4678999999999999873 5999999999999999877 7888999999999984 89999
Q ss_pred EEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC-CCCCCCCCceEEEeecccCccccceeeecCCcEE
Q 044171 294 SLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS-SSILSFSPWITSIAASITDRKYNNTIKLANGHSF 372 (813)
Q Consensus 294 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (813)
|||||+. +.+.++.+++++.++|++||+||||+|.+. ..+|+..+++|+|||++.+....
T Consensus 134 NmSlGg~--------~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~a----------- 194 (546)
T 2qtw_B 134 LLPLAGG--------YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV----------- 194 (546)
T ss_dssp EECEEEE--------CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCBC-----------
T ss_pred EecCCCC--------CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCcc-----------
Confidence 9999963 236788899999999999999999999764 34578899999999964221000
Q ss_pred EeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcC
Q 044171 373 SGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIE 452 (813)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 452 (813)
T Consensus 195 -------------------------------------------------------------------------------- 194 (546)
T 2qtw_B 195 -------------------------------------------------------------------------------- 194 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCee
Q 044171 453 AAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVV 532 (813)
Q Consensus 453 a~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 532 (813)
..-
T Consensus 195 -----------------------------------------------------------------------------~~s 197 (546)
T 2qtw_B 195 -----------------------------------------------------------------------------TLG 197 (546)
T ss_dssp -----------------------------------------------------------------------------EET
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred eecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCCH
Q 044171 533 ASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWSP 612 (813)
Q Consensus 533 s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~ 612 (813)
+.||++|+.+ ||+|||++|+|+++.. +..|..++|||||||||||++|||+|++|++++
T Consensus 198 ~~fSn~G~~v-------------DI~APG~~I~St~~~~--------~~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp 256 (546)
T 2qtw_B 198 TLGTNFGRCV-------------DLFAPGEDIIGASSDC--------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTL 256 (546)
T ss_dssp TEECCBSTTC-------------CEEEECSSEEEECTTS--------TTCEEEECSHHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred CCcCCCCCcc-------------eEEecCccEEeeccCC--------CCcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCH
Confidence 1278888754 9999999999998642 247999999999999999999999999999999
Q ss_pred HHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccc--cCccCcCC
Q 044171 613 AAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGF--INPARAID 668 (813)
Q Consensus 613 ~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~--vd~~~A~~ 668 (813)
++||++|++||.+.......+........|+.- ...+.....+|+|+ .+++.+..
T Consensus 257 ~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l-~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 257 AELRQRLIHFSAKDVINEAWFPEDQRVLTPNLV-AALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp HHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEE-CCCCCTTCC--CCCEEEEEECCCC
T ss_pred HHHHHHHHHhccccccCCccCccccCCCCccch-hccCCcccccCCCcchhchhccCC
Confidence 999999999997643211100000000011100 01122456789999 88888875
No 31
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=6.2e-45 Score=426.69 Aligned_cols=150 Identities=21% Similarity=0.248 Sum_probs=103.9
Q ss_pred CCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCC
Q 044171 141 EFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYAS 220 (813)
Q Consensus 141 ~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~ 220 (813)
+++|+||+|||||||||++||+|.++... +.++|..+ ..+..
T Consensus 66 g~~G~gV~VaViDtGid~~Hpdl~~~~~~----------------------------~~~~~~~~----------~~d~~ 107 (600)
T 2oxa_A 66 GVLGHGVNVAVVDDGLAIAHPDLADNVRP----------------------------GSKNVVTG----------SDDPT 107 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGBCS----------------------------CCBCTTTC----------SSCCC
T ss_pred CCCCCCcEEEEecCCcCCCCcchhhcccc----------------------------CceeccCC----------CCCCC
Confidence 79999999999999999999999975321 11222221 01123
Q ss_pred CCC-CCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCC--HHHHHHHHHHHHhCCCcEEEEcc
Q 044171 221 PFD-ADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGY--MADVVAAVDQAVEDGVDIISLSV 297 (813)
Q Consensus 221 ~~d-~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~--~~~i~~ai~~a~~~g~~VIn~S~ 297 (813)
|.| ++||||||||||+|. .++ ..+.||||+|+|+.+|+++..+.. ...+++....+..++++||||||
T Consensus 108 p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~ 178 (600)
T 2oxa_A 108 PTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSY 178 (600)
T ss_dssp CCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECC
T ss_pred CCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEec
Confidence 444 789999999999998 321 236899999999999999886632 23344444447778999999999
Q ss_pred CCCCCC-CCChhhhhHH-HHHHHH--HHhCCcEEEEecCCCCCC
Q 044171 298 GPSAVP-SGPAAFLNAL-EMELLF--ATKAGVLVVQAAGNSGPS 337 (813)
Q Consensus 298 G~~~~~-~~~~~~~~~~-~~a~~~--a~~~Gi~vV~AAGN~g~~ 337 (813)
|..... .....+...+ +.+++. +.++|++||+||||+|..
T Consensus 179 G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~ 222 (600)
T 2oxa_A 179 RMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK 222 (600)
T ss_dssp CCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred cCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCcc
Confidence 986432 1212222233 333333 557899999999999864
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=9.2e-45 Score=385.63 Aligned_cols=224 Identities=31% Similarity=0.465 Sum_probs=191.7
Q ss_pred CCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCCC
Q 044171 142 FSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYASP 221 (813)
Q Consensus 142 ~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~ 221 (813)
.+|+||+|||||||||++||+|.++ +...++|..+ .
T Consensus 29 ~~G~gv~VaViDtGvd~~h~~l~~~-----------------------------~~~~~~~~~~---------------~ 64 (279)
T 3f7m_A 29 SAGAGACVYVIDTGVEDTHPDFEGR-----------------------------AKQIKSYAST---------------A 64 (279)
T ss_dssp TTTTTEEEEEEESCCCTTCGGGTTC-----------------------------EEEEEECSSS---------------S
T ss_pred CCCCCCEEEEEcCCCCCCChhhccc-----------------------------cccccCCCCC---------------C
Confidence 5999999999999999999999864 3344444321 2
Q ss_pred CCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHHHHHHhCC-------CcEE
Q 044171 222 FDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAVDQAVEDG-------VDII 293 (813)
Q Consensus 222 ~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g-------~~VI 293 (813)
.|.+||||||||||+|+ ..||||+|+|+.+|+++..+ +..++++++|+|+++++ ++||
T Consensus 65 ~d~~gHGT~vAgii~~~--------------~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vi 130 (279)
T 3f7m_A 65 RDGHGHGTHCAGTIGSK--------------TWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVA 130 (279)
T ss_dssp SCSSSHHHHHHHHHHCT--------------TTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEE
T ss_pred CCCCCcHHHHHHHHhcC--------------ccccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEE
Confidence 27889999999999986 26999999999999998876 78899999999999976 8999
Q ss_pred EEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCCCC-CCCCCCceEEEeecccCccccceeeecCCcEE
Q 044171 294 SLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSSSS-ILSFSPWITSIAASITDRKYNNTIKLANGHSF 372 (813)
Q Consensus 294 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~~~vitVgA~~~~~~~~~~~~~~~~~~~ 372 (813)
|||||.. +.+.++.+++.+.++|++||+||||+|..... .|+..+++|+|||++.+
T Consensus 131 n~S~g~~--------~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------- 187 (279)
T 3f7m_A 131 SMSLGGG--------YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN--------------- 187 (279)
T ss_dssp EECCCEE--------CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------
T ss_pred EeCCCcC--------ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC---------------
Confidence 9999964 33678889999999999999999999976543 47788999999985311
Q ss_pred EeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcC
Q 044171 373 SGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIE 452 (813)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~G 452 (813)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeeeeecCCCCee
Q 044171 453 AAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRAIYHGQAPVV 532 (813)
Q Consensus 453 a~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 532 (813)
+.+
T Consensus 188 -----------------------------------------------------------------------------~~~ 190 (279)
T 3f7m_A 188 -----------------------------------------------------------------------------DVR 190 (279)
T ss_dssp -----------------------------------------------------------------------------SBB
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 236
Q ss_pred eecccCCCCcCcccccCCCCCCCceecCCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHHHHHHHHhCCCCCH
Q 044171 533 ASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGVAALIKQRHPKWSP 612 (813)
Q Consensus 533 s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~s~ 612 (813)
+.||++||.. ||+|||++|+++++ ++.|..++|||||||||||++|||+|++|+ ++
T Consensus 191 ~~~S~~g~~~-------------di~ApG~~i~s~~~----------~~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~ 246 (279)
T 3f7m_A 191 STFSNYGRVV-------------DIFAPGTSITSTWI----------GGRTNTISGTSMATPHIAGLAAYLFGLEGG-SA 246 (279)
T ss_dssp CTTCCBSTTC-------------CEEEECSSEEEECG----------GGCEEEECSHHHHHHHHHHHHHHHHHHTCC-CT
T ss_pred CCCCCCCCCC-------------eEEECCCCeEeecC----------CCCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CH
Confidence 8899999865 99999999999984 457999999999999999999999999999 99
Q ss_pred HHHHHHHHccccccC
Q 044171 613 AAITSAMMTSAEVTD 627 (813)
Q Consensus 613 ~~ik~~L~~TA~~~~ 627 (813)
++||++|++||++..
T Consensus 247 ~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 247 GAMCGRIQTLSTKNV 261 (279)
T ss_dssp TTHHHHHHHHSEESC
T ss_pred HHHHHHHHHhccccc
Confidence 999999999998753
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=2.2e-44 Score=412.75 Aligned_cols=284 Identities=23% Similarity=0.261 Sum_probs=207.7
Q ss_pred CCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCC
Q 044171 133 VWPTLGGAEFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDF 212 (813)
Q Consensus 133 ~w~~~~~~~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~ 212 (813)
+|.. +++|+||+|||||||||++||+|.++... .+.++|.++
T Consensus 46 aw~~----g~tG~gv~VaViDtGvd~~Hpdl~~~~~~---------------------------~~~~d~~~~------- 87 (503)
T 2id4_A 46 LWYN----NITGAGVVAAIVDDGLDYENEDLKDNFCA---------------------------EGSWDFNDN------- 87 (503)
T ss_dssp HHHT----TCSCTTCEEEEEESCCCTTSTTTTTTBCG---------------------------GGCEETTTT-------
T ss_pred HHhc----CCCCCCeEEEEEeCCCCCCChhHhhcccc---------------------------cCcccCCCC-------
Confidence 5655 78999999999999999999999976321 012344332
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCCCCHHHHHHHHHHHHhCCCcE
Q 044171 213 NSTRDYASPFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFGGYMADVVAAVDQAVEDGVDI 292 (813)
Q Consensus 213 ~~~~~~~~~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~~V 292 (813)
..+.....|.+||||||||||+|..+++ ..+.||||+|+|+.+|+++.. +...++++||+|+++++ +|
T Consensus 88 --~~~~~p~~d~~gHGT~vAGiiaa~~~n~--------~~~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~I 155 (503)
T 2id4_A 88 --TNLPKPRLSDDYHGTRCAGEIAAKKGNN--------FCGVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DI 155 (503)
T ss_dssp --BSCCCCCSTTTTHHHHHHHHHHCCSSSS--------SSCCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SE
T ss_pred --CCCCCCCCCCCChHHHHHHHHHhccCCC--------CCcEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CE
Confidence 0111223578899999999999975322 235799999999999999743 67788999999999988 99
Q ss_pred EEEccCCCCCCCCChhhhhHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--CCC--CCCCceEEEeecccCccccce
Q 044171 293 ISLSVGPSAVPSGPAAFLNALEMELLFAT-----KAGVLVVQAAGNSGPSSS--SIL--SFSPWITSIAASITDRKYNNT 363 (813)
Q Consensus 293 In~S~G~~~~~~~~~~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~~~vitVgA~~~~~~~~~~ 363 (813)
||||||..............+..++.++. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 156 in~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~------ 229 (503)
T 2id4_A 156 YSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK------ 229 (503)
T ss_dssp EEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT------
T ss_pred EEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC------
Confidence 99999975421111112234555555554 489999999999997532 222 246789999985311
Q ss_pred eeecCCcEEEeeecCCCCCCCceeeeEEecccccCcccccccccccCCCCCCcCcccccceEEEEeeccCCCCCchhHHH
Q 044171 364 IKLANGHSFSGIGLAPPTLGRVYYPLAAAADVCHRNVSTGIFSLESCQYPELFIPALVRGKLIICTYSFDFENDDATIAT 443 (813)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~ 443 (813)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHHHHHHhhcCccCCCCceeeeeeeEEEccCeee
Q 044171 444 VADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDLLEYYNSHTIKSRAGQAVVFHARARILDGRRA 523 (813)
Q Consensus 444 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 523 (813)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCCCCeeeecccCCCCcCcccccCCCCCCCceec----CCCcEEeccCCCCCCCCCCCCCcceeeeccCChhhHHHHH
Q 044171 524 IYHGQAPVVASYSSRGPDVNNALLQTADVLKPNIMA----PGSSIWAAWSPSSEGDPNLKGRNFALLSGTSMATPHIAGV 599 (813)
Q Consensus 524 ~~~~~~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~A----PG~~I~Sa~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~ 599 (813)
+.++.||++||.. |++| ||..|+++.. .++.|..++|||||||||||+
T Consensus 230 ------~~~a~~S~~g~~~-------------~~~a~~~gpG~~I~st~~---------~~~~~~~~sGTS~AaP~VAG~ 281 (503)
T 2id4_A 230 ------DLHPPYSEGCSAV-------------MAVTYSSGSGEYIHSSDI---------NGRCSNSHGGTSAAAPLAAGV 281 (503)
T ss_dssp ------SCCCTTCCCCTTE-------------EEEEECSBTTBCEEEECS---------TTCEEEEECSHHHHHHHHHHH
T ss_pred ------CCcCCcCCCCCcc-------------eEeecCCCCCCceEeecC---------CCCceecCCCccccchhhhHH
Confidence 2367899999987 6766 8999999953 245899999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHccccccCCCCCcccccCCCCCccccccccCCCCCccCccccCccCcCCC
Q 044171 600 AALIKQRHPKWSPAAITSAMMTSAEVTDHSGSPILAQDYSDSPILEHVLVHATPFDFGAGFINPARAIDP 669 (813)
Q Consensus 600 aALl~q~~p~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaG~vd~~~A~~~ 669 (813)
+|||+|++|+|++++||++|++||+++.....+ .+..+ .........||||+||+.+|++.
T Consensus 282 aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~----~~~~~-----~~g~~~~~~~G~G~vda~~Av~~ 342 (503)
T 2id4_A 282 YTLLLEANPNLTWRDVQYLSILSAVGLEKNADG----DWRDS-----AMGKKYSHRYGFGKIDAHKLIEM 342 (503)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGG----CCEEC-----SSSSEEBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHhccccCCCCcCC----Cceec-----CCCCccCcccCCcEecHHHHHHH
Confidence 999999999999999999999999987543000 00000 01112345799999999999964
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.1e-41 Score=400.84 Aligned_cols=150 Identities=21% Similarity=0.261 Sum_probs=106.4
Q ss_pred CCCCCCcEEEEEeeccCCCCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCceEEEEEchhhhhhcCCCCCCCCCCC
Q 044171 141 EFSGEGVVIGFIDTGINPEHPSFASHSFRGNQSISKFKGKCTTGNRFPSTACNSKIVGAQYFARAAIAYGDFNSTRDYAS 220 (813)
Q Consensus 141 ~~~G~gv~VaVIDtGid~~Hp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~ 220 (813)
+++|+||+|||||||||++||||.++.... .++|..+ ..+..+
T Consensus 66 g~tG~GV~VaViDtGid~~HpDL~~n~~~~----------------------------~~~~~~~---------~~dp~p 108 (600)
T 3hjr_A 66 GVLGQGVNVAVVDDGLAIAHPDLADNVRPG----------------------------SKNVVTG---------SDDPTP 108 (600)
T ss_dssp TCSCTTCEEEEESSCCCTTCTTTGGGBCSC----------------------------CBCTTTS---------SSCCCC
T ss_pred CCCCCCeEEEEEcCCCCCCChhHhhccccC----------------------------cceeecC---------CCCCCC
Confidence 799999999999999999999999753210 1111111 111122
Q ss_pred CCCCCCCccccccccccCCCccceecccccccccccccCccEEEEEEeeCCC-CCHHHHHHHH-HHHHhCCCcEEEEccC
Q 044171 221 PFDADGHGSHTASTAAGNHRVPVIVSGFNYGYASGMAPGARIAVYKALYTFG-GYMADVVAAV-DQAVEDGVDIISLSVG 298 (813)
Q Consensus 221 ~~d~~gHGThVAGiiag~~~~~~~~~g~~~~~~~GvAp~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~~VIn~S~G 298 (813)
..|++||||||||||||..+ + ..+.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||||||
T Consensus 109 ~~~~~gHGThVAGiIAa~~n------~---~g~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G 179 (600)
T 3hjr_A 109 TDPDTAHGTSVSGIIAAVDN------A---IGTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYG 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCCSS------S---SSCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCC
T ss_pred CCCCCChHHHHHHHHhEeCC------C---CCcEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccC
Confidence 34578999999999998642 1 2357999999999999998876 6777887776 6778889999999999
Q ss_pred CCCCCC--CChhhhhHHHHHHHHH--HhCCcEEEEecCCCCC
Q 044171 299 PSAVPS--GPAAFLNALEMELLFA--TKAGVLVVQAAGNSGP 336 (813)
Q Consensus 299 ~~~~~~--~~~~~~~~~~~a~~~a--~~~Gi~vV~AAGN~g~ 336 (813)
...... ........++.++..+ ..+|+++|+||||.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~ 221 (600)
T 3hjr_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFN 221 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSS
T ss_pred ccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccc
Confidence 654321 1122233344444333 3689999999999864
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=6.4e-25 Score=251.83 Aligned_cols=100 Identities=32% Similarity=0.407 Sum_probs=80.9
Q ss_pred cccccccCccEEEEEEeeCCCCCHHHHHHHHHHHHh---CCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEE
Q 044171 252 YASGMAPGARIAVYKALYTFGGYMADVVAAVDQAVE---DGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVV 328 (813)
Q Consensus 252 ~~~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV 328 (813)
.+.||||+|+|+.+++. ...++++++|+||++ ++++|||||||...... ...+.+.++.++..|..+||+||
T Consensus 273 ~~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~-~~~~~~~~~~~~~~a~~~Gi~vv 347 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSW-APASIAAMNRAFLDAAALGVTVL 347 (552)
T ss_dssp HHHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGS-CHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccC-CHHHHHHHHHHHHHHHhCCeEEE
Confidence 46799999999999973 245789999999998 79999999999754211 12345678888899999999999
Q ss_pred EecCCCCCCC--------CCCCCCCCceEEEeeccc
Q 044171 329 QAAGNSGPSS--------SSILSFSPWITSIAASIT 356 (813)
Q Consensus 329 ~AAGN~g~~~--------~~~~~~~~~vitVgA~~~ 356 (813)
+||||+|... ..+|+.+|+|++|||++.
T Consensus 348 ~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 348 AAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999643 346788999999999764
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=5.1e-22 Score=217.11 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=81.9
Q ss_pred cccccCccEEEEEEeeCCCCCHHHHHHHHHHHHh-CCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecC
Q 044171 254 SGMAPGARIAVYKALYTFGGYMADVVAAVDQAVE-DGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAG 332 (813)
Q Consensus 254 ~GvAp~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAG 332 (813)
..+||+++++.+++.+..+...++++.+|+||++ ++++|||||||..........+.+.++.+++.|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4578999999999987655667889999999998 899999999997431100012346788899999999999999999
Q ss_pred CCCCCC-------------CCCCCCCCceEEEeeccc
Q 044171 333 NSGPSS-------------SSILSFSPWITSIAASIT 356 (813)
Q Consensus 333 N~g~~~-------------~~~~~~~~~vitVgA~~~ 356 (813)
|+|... ..+|+.+|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 999653 245688999999999764
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.98 E-value=3.3e-09 Score=120.78 Aligned_cols=79 Identities=18% Similarity=0.289 Sum_probs=58.1
Q ss_pred HHHHHHHHHH--hCCCcEEEEccCCCCCCCCChhhhhHHHHHHHHHHhCCcEEEEecCCCCCCC----------CCCCCC
Q 044171 277 DVVAAVDQAV--EDGVDIISLSVGPSAVPSGPAAFLNALEMELLFATKAGVLVVQAAGNSGPSS----------SSILSF 344 (813)
Q Consensus 277 ~i~~ai~~a~--~~g~~VIn~S~G~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----------~~~~~~ 344 (813)
.++..+++.. .+-++|||+|||....... ..+.+.++.++..+..+||.|++|+||+|... ...|+.
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~-~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas 362 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLS-SAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPAS 362 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSC-HHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTT
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccC-HHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCC
Confidence 4454444433 2468999999997643211 33556778888899999999999999999743 246788
Q ss_pred CCceEEEeeccc
Q 044171 345 SPWITSIAASIT 356 (813)
Q Consensus 345 ~~~vitVgA~~~ 356 (813)
+|+|++||+++.
T Consensus 363 ~P~VtaVGgT~l 374 (544)
T 3edy_A 363 SPYVTTVGGTSF 374 (544)
T ss_dssp CTTSEEEEEEEE
T ss_pred CCcEEEEeeeec
Confidence 999999999763
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.61 E-value=1.4e-07 Score=79.06 Aligned_cols=74 Identities=11% Similarity=0.142 Sum_probs=55.8
Q ss_pred CCCCcEEEEEeCCCCcchhhhcccccCCchhhhHhhhhhhhhHHHHHHHHhcCCceeeEEEeccceeEEEEEeCHHHHHH
Q 044171 20 PLNAKVFIVLMDEEPVTSLKLERSYDRNETDAIVYKERISGGHDRFLESLLHGHSYTKLYSYTHLLSGFAIHIESEEAVS 99 (813)
Q Consensus 20 ~~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 99 (813)
...+++|||.|++....+ . .+..+++ ..+.++.++|.. |+||+++++.+++ +
T Consensus 5 ~~i~~~YIV~~k~~~~~~---------------~-------~~~~~~~----~~g~~i~~~y~~-~~Gfaa~l~~~~~-~ 56 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSC---------------A-------KKEDVIS----EKGGKLQKCFKY-VDAASATLNEKAV-E 56 (80)
T ss_dssp ---CCEEEEEECTTCCSH---------------H-------HHHHHHH----TTTCEEEEECSS-SSEEEEECCHHHH-H
T ss_pred ccCCCCEEEEECCCCChH---------------H-------HHHHHHH----HcCCcceEEEcc-cEEEEEEcCHHHH-H
Confidence 345799999999875421 0 0112222 234678999998 9999999999998 9
Q ss_pred HHhcCcCeeEEEeCccceeccC
Q 044171 100 TLQNAKGVRIIHEDIKMEKLTM 121 (813)
Q Consensus 100 ~L~~~p~V~~v~~~~~~~~~~~ 121 (813)
+|+++|+|.+||+|..++++.+
T Consensus 57 ~L~~~p~V~~Ve~D~~v~~~tt 78 (80)
T 3cnq_P 57 ELKKDPSVAYVEEDKLYRALSA 78 (80)
T ss_dssp HHHTCTTEEEEEECCEEEECCC
T ss_pred HHHhCCCccEEEeCcEEEEeee
Confidence 9999999999999999988654
No 39
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.56 E-value=1.1e-07 Score=85.30 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=57.3
Q ss_pred CCCcEEEEEeCCCCcchhhhcccccCCchhhhHhhhhhhhhHHHHHHHHhcC--CceeeEEEeccceeEEEEEeCHHHHH
Q 044171 21 LNAKVFIVLMDEEPVTSLKLERSYDRNETDAIVYKERISGGHDRFLESLLHG--HSYTKLYSYTHLLSGFAIHIESEEAV 98 (813)
Q Consensus 21 ~~~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~ 98 (813)
..+++|||+|++..... .+. .|.+++..+... ....+.++|.+.|+||+++++.+++
T Consensus 35 ~ip~~YIV~lk~~~~~~------------~~~--------~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~- 93 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHLS------------QSE--------RTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLL- 93 (114)
T ss_dssp EEEEEEEEEECTTCCHH------------HHH--------HHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGH-
T ss_pred CCCCcEEEEECCCCCHH------------HHH--------HHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHH-
Confidence 35789999999875311 111 233333333221 3467899999999999999999998
Q ss_pred HHHhcCcCeeEEEeCcccee
Q 044171 99 STLQNAKGVRIIHEDIKMEK 118 (813)
Q Consensus 99 ~~L~~~p~V~~v~~~~~~~~ 118 (813)
++|+++|+|.+||+|+.++.
T Consensus 94 ~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 94 ELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHcCCCccEEEeCceEec
Confidence 99999999999999988764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.36 E-value=6.9e-07 Score=81.00 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=40.3
Q ss_pred ceeeEEEeccceeEEEEEeCHHHHHHHHhcCcCeeEEEeCcccee
Q 044171 74 SYTKLYSYTHLLSGFAIHIESEEAVSTLQNAKGVRIIHEDIKMEK 118 (813)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 118 (813)
+..+.++|.+.|+||+++++.+++ +.|+++|+|.+|+++..++.
T Consensus 80 g~~i~~~Y~~~~~GFaa~l~~~~~-~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 80 LTKILHVFHGLLPGFLVKMSGDLL-ELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp CCEEEEEECSSSCEEEEECCGGGH-HHHHTSTTEEEEEEEEEEEE
T ss_pred CCceEEEecccceEEEEEcCHHHH-HHHHcCCCCcEEEeCceEec
Confidence 457889999999999999999998 99999999999999988764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.25 E-value=3.5e-06 Score=69.56 Aligned_cols=71 Identities=18% Similarity=0.168 Sum_probs=51.9
Q ss_pred CcEEEEEeCCCCcchhhhcccccCCchhhhHhhhhhhhhHHHHHHHHhcCCceeeEEEe-ccceeEEEEEeCHHHHHHHH
Q 044171 23 AKVFIVLMDEEPVTSLKLERSYDRNETDAIVYKERISGGHDRFLESLLHGHSYTKLYSY-THLLSGFAIHIESEEAVSTL 101 (813)
Q Consensus 23 ~~~yiV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~L 101 (813)
.+.|||.||++...+ .++ .+.+++.+. +..+.+.| ..+|+||+++++.+.+ ++|
T Consensus 2 ~~sYIV~lk~~~~~~------------~~~--------~~~~~~~~~----gg~i~~~y~~~~~~Gfa~~~~~~~l-~~l 56 (76)
T 1v5i_B 2 AGKFIVIFKNDVSED------------KIR--------ETKDEVIAE----GGTITNEYNMPGMKGFAGELTPQSL-TKF 56 (76)
T ss_dssp CEEEEEEECTTCCHH------------HHH--------HHHHHHHHH----TCCCCEEEEETTEEEEEEEECHHHH-HHH
T ss_pred CceEEEEECCCCCHH------------HHH--------HHHHHHHhh----CCceEEEEEcCceeEEEEEcCHHHH-HHH
Confidence 378999999875411 111 233333333 23567788 4799999999999988 999
Q ss_pred hcC--cCeeEEEeCcccee
Q 044171 102 QNA--KGVRIIHEDIKMEK 118 (813)
Q Consensus 102 ~~~--p~V~~v~~~~~~~~ 118 (813)
+++ |.|.+||+|..++.
T Consensus 57 ~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 57 QGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp HHTBTTTEEEEEECCEEEC
T ss_pred HhcCCCCCcEEcCCcEEeC
Confidence 999 88999999988764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.85 E-value=5.3e-05 Score=73.69 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=62.0
Q ss_pred cccCCCCCCcCcc------cccceEEEEeeccCCCCCc-hhHHHHHHHHHhcCceEEEEEeCCC-CCCCCCccccccCCc
Q 044171 407 LESCQYPELFIPA------LVRGKLIICTYSFDFENDD-ATIATVADNIKKIEAAGFILRMDPD-QDFSPNKFKDMALDV 478 (813)
Q Consensus 407 ~~~c~~~~~~~~~------~~~Gkivl~~~~~~~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~-~~~~~~~~~~~~~~i 478 (813)
...|.....+... ..+|||+|++| |. |+|.+|+.+|+++||.++|+||+.. +.............|
T Consensus 83 ~~GC~~~~~~~~~~~~~~~~~~gkIaLV~R------G~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~I 156 (194)
T 3icu_A 83 LNACNPHTNFTVPTVWGSTVQVSWLALIQR------GGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDI 156 (194)
T ss_dssp TTCCSTTCCBCCCBCTTSSCBCCEEEEEES------CTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSS
T ss_pred cCCCCCCccccCCcccccccCCCeEEEEEC------CCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCce
Confidence 4678754433211 25799999998 77 9999999999999999999999852 111111112233569
Q ss_pred ceEEEcccchhHHHHHHHhhcC
Q 044171 479 PGIILNNMQSSMDLLEYYNSHT 500 (813)
Q Consensus 479 p~~~i~~~~~g~~~~~~~~~~~ 500 (813)
|.++| +..+|+.|++++..+.
T Consensus 157 Psv~I-s~~~G~~L~~~L~~G~ 177 (194)
T 3icu_A 157 VAIMI-GNLKGTKILQSIQRGI 177 (194)
T ss_dssp EEEEE-CHHHHHHHHHHHHTTC
T ss_pred eEEEE-CHHHHHHHHHHHHCCC
Confidence 98888 6778999999987653
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.85 E-value=0.0014 Score=51.93 Aligned_cols=43 Identities=14% Similarity=0.295 Sum_probs=37.5
Q ss_pred ceeeEEEeccceeEEEEEeCHHHHHHHHhcCcCeeEEEeCcccee
Q 044171 74 SYTKLYSYTHLLSGFAIHIESEEAVSTLQNAKGVRIIHEDIKMEK 118 (813)
Q Consensus 74 ~~~~~~~~~~~~~g~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 118 (813)
+.++.++|. .+++++++++.+.+ +.|+++|+|++||+|..++.
T Consensus 22 gG~i~~~~~-~I~a~~~~lp~~~~-~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 22 GGHIVYQFK-LIPAVVVDVPANAV-GKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp TCEEEEECS-SSSEEEEEECGGGH-HHHHTSTTEEEEEECCEEEE
T ss_pred CCEEEEEec-CCcEEEEEeCHHHH-HHHhcCCCceEEecCcEEEc
Confidence 467888885 68999999999887 99999999999999987653
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.51 E-value=0.0061 Score=54.96 Aligned_cols=76 Identities=14% Similarity=0.202 Sum_probs=59.6
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCCCCeEEEEEEEEeCCcceEEEe
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNSTRAYSFGAMVLQGNNNHIIRIP 804 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~~~~~G~i~~~~~~~~~l~~P 804 (813)
+.+.+.++.|+|+|+.+..|++... . -++++|.+.+|+||++..++|+|.+... ..+++.+.+.-+++..+.++
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~--~--~F~i~P~~g~L~pg~~~~i~V~F~P~~~--g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTC--R--PFSIEPAIGTLNVGESMQLEVEFEPQSV--GDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECC--T--TEEEESSEEEECTTCEEEEEEEECCSSS--BCCCCBCEEEESSSCEECCE
T ss_pred CCeEEEEEEEEECCCCCEEEEEecC--C--CeEEECCcCEECCCCEEEEEEEEEcCCC--ccEEEEEEEEECCCCEEEEE
Confidence 4667778899999999999987753 2 4778899999999999999999999864 44667777776566666665
Q ss_pred EE
Q 044171 805 IA 806 (813)
Q Consensus 805 ~~ 806 (813)
..
T Consensus 114 L~ 115 (122)
T 2ys4_A 114 LY 115 (122)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=95.48 E-value=0.031 Score=61.91 Aligned_cols=78 Identities=15% Similarity=0.070 Sum_probs=57.7
Q ss_pred CCCcCcccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCCCCCCCCccccccCCcceEEEcccchhHHH
Q 044171 413 PELFIPALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPDQDFSPNKFKDMALDVPGIILNNMQSSMDL 492 (813)
Q Consensus 413 ~~~~~~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~~~ip~~~i~~~~~g~~~ 492 (813)
..++...+++||||++.+ |.|.+.+|+.+|+++||.|+|++++..+...+.........||.+.+ +.++++.|
T Consensus 105 ~~D~~~~dv~GkIvlv~~------g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~I-s~~~a~~L 177 (421)
T 2ek8_A 105 TADVAGKDLNGKIALIQR------GNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGI-TKQEGDAL 177 (421)
T ss_dssp TTTTTTSCCTTSEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEE-CHHHHHHH
T ss_pred hhhcCCCCcCceEEEEeC------CCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEe-CHHHHHHH
Confidence 345555589999999988 66789999999999999999999986533333221223456888886 56678888
Q ss_pred HHHHh
Q 044171 493 LEYYN 497 (813)
Q Consensus 493 ~~~~~ 497 (813)
+..+.
T Consensus 178 ~~~l~ 182 (421)
T 2ek8_A 178 AANLR 182 (421)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 88773
No 46
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=94.34 E-value=0.23 Score=44.22 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=45.6
Q ss_pred EEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecC
Q 044171 728 RKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNS 782 (813)
Q Consensus 728 ~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~ 782 (813)
-.+++.|.|...++.+|++++...+++++.- +..++|+||+.+++.|.+.++..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-~~~i~v~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-KQTIQVEPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-CCEEEECTTCEEEEEEEEEECGG
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-CCcEEECCCCEEEEEEEEEEChH
Confidence 3567799999999999999998876766543 45799999999999999999775
No 47
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.53 E-value=0.35 Score=42.26 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=61.7
Q ss_pred CCcEEEecc--CccEEEEEEEEecCCCCeeEEEEEeC-CCCcEEEEecCeEEEecCcEEEEEEEEEEecCCCCeEEEEEE
Q 044171 716 TPSITISNL--VGSRKVIRRVRNVSSANETYTVTVKE-PSGVKVSVSPQVFKIRGLASRELKIVLKATNSTRAYSFGAMV 792 (813)
Q Consensus 716 ~~s~~~~~~--~~~~~~~~tv~N~~~~~~ty~~~~~~-~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~~~~~G~i~ 792 (813)
...+.++.+ +..++.+++|+|+|+.+..|++.... +.+..++++|.+=+|+||++.+|.|+|.+... +.+.=.|+
T Consensus 14 ~~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~--g~f~~~i~ 91 (112)
T 2e6j_A 14 FELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL--GNFEEEFL 91 (112)
T ss_dssp CSEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCC--EEEEEEEC
T ss_pred cccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECCCc--ceEEEEEE
Confidence 344555554 45566778999999999999984211 11235778899999999999999999999753 34445677
Q ss_pred EEeCCc-ceEEEeEEEEE
Q 044171 793 LQGNNN-HIIRIPIAVYV 809 (813)
Q Consensus 793 ~~~~~~-~~l~~P~~~~~ 809 (813)
+.-.+. ..+++-+-..+
T Consensus 92 v~~~g~~~~~~L~i~G~v 109 (112)
T 2e6j_A 92 VNVNGSPEPVKLTIRGCV 109 (112)
T ss_dssp EEESSCSSCCCEEEEEEE
T ss_pred EEECCCCceEEEEEEEEE
Confidence 665432 33444444433
No 48
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=93.50 E-value=0.51 Score=43.31 Aligned_cols=86 Identities=8% Similarity=-0.037 Sum_probs=63.8
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCC----CCcEEEEecCeEEEecCcEEEEEEEEEEecC-------CCCeEEEEEEE
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEP----SGVKVSVSPQVFKIRGLASRELKIVLKATNS-------TRAYSFGAMVL 793 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~----~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~-------~~~~~~G~i~~ 793 (813)
...++.+++|+|+|.-+.+|++..... ..--++++|..-+|+||++.++.|++.+... ....++--+++
T Consensus 42 ~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 42 RQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 355667789999999999999985321 1123667899999999999999999997542 01344567777
Q ss_pred EeCCcceEEEeEEEEEe
Q 044171 794 QGNNNHIIRIPIAVYVS 810 (813)
Q Consensus 794 ~~~~~~~l~~P~~~~~~ 810 (813)
.=.+|.+..+|+.....
T Consensus 122 ~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EeecCCcEEEEEecccc
Confidence 77788889999877653
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=89.62 E-value=0.26 Score=60.90 Aligned_cols=25 Identities=28% Similarity=0.740 Sum_probs=23.4
Q ss_pred CCCCCCcEEEEEeeccCCCCCCCCC
Q 044171 141 EFSGEGVVIGFIDTGINPEHPSFAS 165 (813)
Q Consensus 141 ~~~G~gv~VaVIDtGid~~Hp~l~~ 165 (813)
.+.|+||+|||+|||||+.+|-|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 4899999999999999999999984
No 50
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=89.17 E-value=3.4 Score=44.30 Aligned_cols=86 Identities=8% Similarity=-0.013 Sum_probs=62.9
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCCCCcE----EEEecCeEEEecCcEEEEEEEEEEecCC-------CCeEEEEEEE
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEPSGVK----VSVSPQVFKIRGLASRELKIVLKATNST-------RAYSFGAMVL 793 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~----v~~~~~~~~v~~g~~~~~~vt~~~~~~~-------~~~~~G~i~~ 793 (813)
....+-++||+|+|.-+.+|++......... ++++|..-+|+||++.++.|++.+.... ....+--+++
T Consensus 45 ~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 45 RQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 4566777899999999999999755322221 6678999999999999999999987731 2234456666
Q ss_pred EeCCcceEEEeEEEEEe
Q 044171 794 QGNNNHIIRIPIAVYVS 810 (813)
Q Consensus 794 ~~~~~~~l~~P~~~~~~ 810 (813)
.-.++.+.-+|.-....
T Consensus 125 ~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 125 HLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EEeCCCcEEEEeccccC
Confidence 66677777777766543
No 51
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=87.18 E-value=4.6 Score=39.86 Aligned_cols=81 Identities=19% Similarity=0.235 Sum_probs=57.2
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCC-CCeEEEEEEEEeC----Cc-c
Q 044171 726 GSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNST-RAYSFGAMVLQGN----NN-H 799 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~-~~~~~G~i~~~~~----~~-~ 799 (813)
...+.+++++|.|+.+.+++..+. |.. +++++..-+++||++.+++|+++..... .+...+.|++... +. .
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~~-p~~--~~~~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~ 95 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVSL-PSF--VSLDDRAFRLQAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKA 95 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEEC-CTT--EECSCCEEEECSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEE
T ss_pred CcceEEEEEEeCCCCceEEEeccC-CCc--eEeeeCcceeCCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccc
Confidence 345567799999999999887643 554 4445667889999999999999887753 3455677888752 22 2
Q ss_pred eEEEeEEEEE
Q 044171 800 IIRIPIAVYV 809 (813)
Q Consensus 800 ~l~~P~~~~~ 809 (813)
..++|+....
T Consensus 96 ~~~i~v~g~v 105 (220)
T 2qsv_A 96 VDSVMVSLPL 105 (220)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEEEEEE
Confidence 4467766643
No 52
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=85.65 E-value=0.54 Score=55.01 Aligned_cols=38 Identities=26% Similarity=0.299 Sum_probs=34.6
Q ss_pred cccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeC
Q 044171 418 PALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMD 461 (813)
Q Consensus 418 ~~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~ 461 (813)
..+++|||+|+.+ |.|.+.+|+.+|+++||.|+|+|++
T Consensus 150 ~~~v~GkIvlv~~------G~~~~~~Kv~~A~~~GA~gviiy~d 187 (707)
T 3fed_A 150 GINCTGKIVIARY------GKIFRGNKVKNAMLAGAIGIILYSD 187 (707)
T ss_dssp CCCCTTCEEEEEC------CSSCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCeEEEEEC------CCCCHhHHHHHHHHCCCEEEEEEcC
Confidence 4579999999998 6688999999999999999999986
No 53
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=84.71 E-value=0.62 Score=53.92 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=35.3
Q ss_pred ccccceEEEEeeccCCCCCchhHHHHHHHHHhcCceEEEEEeCCC
Q 044171 419 ALVRGKLIICTYSFDFENDDATIATVADNIKKIEAAGFILRMDPD 463 (813)
Q Consensus 419 ~~~~Gkivl~~~~~~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 463 (813)
.+++|||||+.+ |.|.+..|+.+|+.+||.|+|+|++..
T Consensus 128 vdv~GkIvlv~~------g~~~~~~K~~~A~~~GA~gvii~~~~~ 166 (640)
T 3kas_A 128 TPVNGSIVIVRA------GKITFAEKVANAESLNAIGVLIYMDQT 166 (640)
T ss_dssp SCCTTSEEEEES------CSSCHHHHHHHHHTTTCSEEEEECCTT
T ss_pred cccCCcEEEEec------CCCCHHHHHHHHHHCCCeEEEEEeccc
Confidence 479999999998 678899999999999999999999764
No 54
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=84.70 E-value=6 Score=35.34 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=39.6
Q ss_pred CccEEEEEEEEecCCCC-eeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 725 VGSRKVIRRVRNVSSAN-ETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~-~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
+...+++.+|+|.|..+ ..|++.+.. .|-.+. ...+.|++|++++|++++.+.
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~--t~~v~La~G~s~tv~f~~~~~ 85 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYK--NWTVSLGPKEEKVLTFNWTPT 85 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEE--EEEEEECTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEe--eEEeccCCCCeEEEEEEEEcC
Confidence 45688899999999865 678887765 343333 335689999999999998743
No 55
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=83.14 E-value=2.2 Score=47.10 Aligned_cols=82 Identities=10% Similarity=0.066 Sum_probs=51.1
Q ss_pred CcccccceEEEEeeccCCCC-C--chhHHHH----HHHHHhcCceEEEEEeCCCCC----CCCCc-cccccCCcceEEEc
Q 044171 417 IPALVRGKLIICTYSFDFEN-D--DATIATV----ADNIKKIEAAGFILRMDPDQD----FSPNK-FKDMALDVPGIILN 484 (813)
Q Consensus 417 ~~~~~~Gkivl~~~~~~~~~-g--~~~~~~~----~~~~~~~Ga~g~i~~n~~~~~----~~~~~-~~~~~~~ip~~~i~ 484 (813)
...+++|||||+.++.+... + .+.+..| ..+|.++||.++|++++.... ..+.. .......||.+.+
T Consensus 123 ~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~I- 201 (444)
T 3iib_A 123 EAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAI- 201 (444)
T ss_dssp CTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEE-
T ss_pred cccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEe-
Confidence 35689999999987432111 1 1123333 457999999999999975311 11111 1122456899888
Q ss_pred ccchhHHHHHHHhhc
Q 044171 485 NMQSSMDLLEYYNSH 499 (813)
Q Consensus 485 ~~~~g~~~~~~~~~~ 499 (813)
+.++++.|...+...
T Consensus 202 s~~da~~L~~~l~~g 216 (444)
T 3iib_A 202 SNPDADLINAMLKRD 216 (444)
T ss_dssp CHHHHHHHHHHHTTT
T ss_pred cHHHHHHHHHHHhCC
Confidence 677888888877643
No 56
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=80.40 E-value=4.9 Score=35.29 Aligned_cols=50 Identities=12% Similarity=0.102 Sum_probs=42.6
Q ss_pred EEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 729 KVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 729 ~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
+.+++|+|.+++...|++....|. ...+.|..=.|.||++.+|.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~--~YrVrP~~G~I~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNE--HYRVRPVYGFVDAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTT--TEEEECSEEEECTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCC--ceEEcCCceEECCCCeEEEEEEeCCC
Confidence 445699999999999999988765 56677888889999999999999874
No 57
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=78.90 E-value=8.5 Score=37.89 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=51.0
Q ss_pred CcEEEeccC-ccEEEEEEEEecCCCCeeEEEEEeCCCC-cEEEEecCeEEEecCcEEEEEEEEEEecCCCC-e--EEEEE
Q 044171 717 PSITISNLV-GSRKVIRRVRNVSSANETYTVTVKEPSG-VKVSVSPQVFKIRGLASRELKIVLKATNSTRA-Y--SFGAM 791 (813)
Q Consensus 717 ~s~~~~~~~-~~~~~~~tv~N~~~~~~ty~~~~~~~~g-~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~~-~--~~G~i 791 (813)
..+.++.+. ...+.+++++|+|+.+...+-.. ..-| ..++ .+.-.++||++.+|.|++++....+. | ....|
T Consensus 124 ~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~-~scgct~~~--~~~~~i~PGe~~~i~v~~~~~~~~g~~~~~~~~~i 200 (220)
T 2qsv_A 124 TYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVT-TRNPALTAV--PDRTEIKPGGSTLLRIAVDPQVMKAEGWQSIAADI 200 (220)
T ss_dssp CEEEEEECTTSCEEEEEEEEECSSSCEEEEEEE-ECSTTEEEE--ESCSEECTTCEEEEEEEECHHHHHHTTCSEEEEEE
T ss_pred eEEeeeccCCCeEEEEEEEEECCCCCEEEEEEE-eCCCCEeee--cCCccCCCCCEEEEEEEEecCCCCCcccceeccEE
Confidence 445555554 44566779999999887765322 2233 3333 34557999999999999987654223 1 56788
Q ss_pred EEEeCC
Q 044171 792 VLQGNN 797 (813)
Q Consensus 792 ~~~~~~ 797 (813)
++..++
T Consensus 201 ~v~~N~ 206 (220)
T 2qsv_A 201 SIICND 206 (220)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 887653
No 58
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=78.74 E-value=4.2 Score=36.30 Aligned_cols=50 Identities=8% Similarity=0.114 Sum_probs=42.7
Q ss_pred EEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEE
Q 044171 728 RKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKA 779 (813)
Q Consensus 728 ~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~ 779 (813)
.+-.++|+|.++....|.+....|. ...+.|..=.|.||++..|.|++.+
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT~p~--~y~VrP~~Gii~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTTNMR--RLSVDPPCGVLDPKEKVLMAVSCDT 76 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEESCTT--TEEEESCEEEECTTCEEEEEEEECC
T ss_pred eEEEEEEECCCCCeEEEEEEcCCCC--cEEEECCCeEECCCCEEEEEEEecC
Confidence 3445699999999999999988876 4667788888999999999999877
No 59
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=77.58 E-value=5 Score=35.88 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=44.6
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 726 GSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
...+-.++|+|.++....|++....|. ...+.|..=.|.||++.+|.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~--~y~VrP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGG--GEEEESCEEEECTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCC--ceEEeCCCcEECCCCeEEEEEEECcC
Confidence 445566799999999999999988775 56677888889999999999999864
No 60
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=77.56 E-value=8.1 Score=33.48 Aligned_cols=49 Identities=10% Similarity=0.154 Sum_probs=42.3
Q ss_pred EEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 730 VIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 730 ~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
-+++|+|.+++...|++....|. ...+.|..=.+.||++.+|.|+..+.
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~--~y~VrP~~G~I~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNN--EYRIAPVFGFVDPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSS--SEEEECSEEEECTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCC--ceEEcCCceEECCCCeEEEEEEeCCC
Confidence 45699999999999999988775 56777888889999999999999874
No 61
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=74.65 E-value=1.7 Score=47.97 Aligned_cols=29 Identities=24% Similarity=0.298 Sum_probs=25.3
Q ss_pred CCeeeecccCCCCcCcccccCCCCCCCceecCCCcEEeccCC
Q 044171 529 APVVASYSSRGPDVNNALLQTADVLKPNIMAPGSSIWAAWSP 570 (813)
Q Consensus 529 ~~~~s~FSS~Gp~~~~~~~~~~g~~KPDI~APG~~I~Sa~~~ 570 (813)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 183 ~~~~~~~S~~g~~v-------------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV-------------EISGPGEAILSTVTV 211 (441)
T ss_dssp TCCBCTTSCCCTTE-------------EEEEECSSEEEECST
T ss_pred CCCCCccccCCCce-------------EEEeccCCeeccccC
Confidence 45789999999876 999999999999863
No 62
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=74.27 E-value=17 Score=31.95 Aligned_cols=72 Identities=11% Similarity=-0.010 Sum_probs=44.9
Q ss_pred CccEEEEEEEEecCCCCeeEE--------EEEeCCCCcEEE-Ee--------cCeEEEecCcEEEEEEEEEE-ecCCCCe
Q 044171 725 VGSRKVIRRVRNVSSANETYT--------VTVKEPSGVKVS-VS--------PQVFKIRGLASRELKIVLKA-TNSTRAY 786 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~--------~~~~~~~g~~v~-~~--------~~~~~v~~g~~~~~~vt~~~-~~~~~~~ 786 (813)
++...++++|+|.++.+.+++ +.+....|-.|- .| -.+.+|+||+++++.+++.. +..-...
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Yt 96 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYE 96 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEE
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEE
Confidence 456788899999998766544 444444453332 11 23689999999999999982 1111223
Q ss_pred EEEEEEEEeC
Q 044171 787 SFGAMVLQGN 796 (813)
Q Consensus 787 ~~G~i~~~~~ 796 (813)
+.++++-+..
T Consensus 97 l~a~l~~~~~ 106 (120)
T 3isy_A 97 VKVTFKGRAE 106 (120)
T ss_dssp EEEEECCEET
T ss_pred EEEEEEeeec
Confidence 4455555543
No 63
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=72.40 E-value=8.4 Score=35.58 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=43.5
Q ss_pred EEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEec
Q 044171 729 KVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 729 ~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+-.++|+|.++....|++....|. ...+.|..=.|.||++.+|.|++....
T Consensus 38 ~~~l~L~N~s~~~VaFKVKTT~p~--~y~VrP~~GiI~P~~s~~V~V~lq~~~ 88 (152)
T 1wic_A 38 KTLIVLTNVTKNIVAFKVRTTAPE--KYRVKPSNSSCDPGASIDIIVSPHGGL 88 (152)
T ss_dssp CEEEEEEBCSSSCEEEEEEESCTT--TEEEESSEEEECTTCEEEEEEEECSSS
T ss_pred EEEEEEEcCCCCeEEEEEECCCCC--ceeecCCCcEECCCCeEEEEEEecCcc
Confidence 445699999999999999988876 566778888899999999999997753
No 64
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=71.24 E-value=33 Score=40.02 Aligned_cols=55 Identities=9% Similarity=0.054 Sum_probs=36.9
Q ss_pred cEEEEEEEEecCCCCeeEEE--EEeCCCCc------EEEEecCeEEEecCcEEEEEEEEEEecC
Q 044171 727 SRKVIRRVRNVSSANETYTV--TVKEPSGV------KVSVSPQVFKIRGLASRELKIVLKATNS 782 (813)
Q Consensus 727 ~~~~~~tv~N~~~~~~ty~~--~~~~~~g~------~v~~~~~~~~v~~g~~~~~~vt~~~~~~ 782 (813)
..+++++|+|+|+.+..-.+ -+..|.+. .+.- =.++.|+|||+++++++|+....
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~~~l 676 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNLTPGQSGTATFNIRRRDL 676 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEECTTCEEEEEEEEEGGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-cccceeCCCCeEEEEEEEcHHHe
Confidence 45778899999997655443 34444321 1221 23678999999999999987543
No 65
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=70.65 E-value=6.8 Score=35.97 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=43.6
Q ss_pred cEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 727 SRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 727 ~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
..+-.++|+|.++....|++....|. ...+.|..=.|.||++.+|.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~--~y~VrP~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPR--RYCVRPNSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTT--SEEEESSEEECCTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCc--cEEEcCCCcEECCCCeEEEEEEECCC
Confidence 34445699999999999999988876 56677888889999999999999874
No 66
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=63.81 E-value=12 Score=43.93 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=43.5
Q ss_pred CCCCCCcEEEecc-----CccEEEEEEEEecCCCCe--eEEEEEeCCCC-c-----EEEEecCeE-EEecCcEEEEEEEE
Q 044171 712 SDLNTPSITISNL-----VGSRKVIRRVRNVSSANE--TYTVTVKEPSG-V-----KVSVSPQVF-KIRGLASRELKIVL 777 (813)
Q Consensus 712 ~~~n~~s~~~~~~-----~~~~~~~~tv~N~~~~~~--ty~~~~~~~~g-~-----~v~~~~~~~-~v~~g~~~~~~vt~ 777 (813)
+-|.|.+|...++ .++.+++++|+|+|+.+. +-++-+..|.+ + .+.- =.++ .|+|||+++++++|
T Consensus 596 ~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~~L~pGes~~V~~~l 674 (721)
T 2x41_A 596 YGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKA-FHKTRLLNPGESEEVVLEI 674 (721)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEE-EEECCCBCTTCEEEEEEEE
T ss_pred CCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhc-ccccccCCCCCeEEEEEEE
Confidence 3455555554443 245678889999999654 44444554432 1 1111 1356 78999999999999
Q ss_pred EEec
Q 044171 778 KATN 781 (813)
Q Consensus 778 ~~~~ 781 (813)
+...
T Consensus 675 ~~~~ 678 (721)
T 2x41_A 675 PVRD 678 (721)
T ss_dssp EGGG
T ss_pred CHHH
Confidence 8754
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=62.73 E-value=23 Score=42.17 Aligned_cols=68 Identities=10% Similarity=0.109 Sum_probs=44.6
Q ss_pred CCCCCCCCcEEEe--cc---CccEEEEEEEEecC-CCCeeEE--EEEeCCCC-----c-EEEEecCeEEEecCcEEEEEE
Q 044171 710 WCSDLNTPSITIS--NL---VGSRKVIRRVRNVS-SANETYT--VTVKEPSG-----V-KVSVSPQVFKIRGLASRELKI 775 (813)
Q Consensus 710 ~~~~~n~~s~~~~--~~---~~~~~~~~tv~N~~-~~~~ty~--~~~~~~~g-----~-~v~~~~~~~~v~~g~~~~~~v 775 (813)
+-+-|.|.+|... ++ .+..+++++|+|+| +.+..-. +-+..|.+ + .+.- =.++.|+|||++++++
T Consensus 714 FG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~g-F~kv~L~pGes~~V~~ 792 (845)
T 3abz_A 714 FGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKG-FEKVHLEPGEKKTVNI 792 (845)
T ss_dssp TTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEE-EEEEEECTTCEEEEEE
T ss_pred ccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheecc-ceeEEECCCCEEEEEE
Confidence 4455677777766 43 35678889999999 7654433 33443321 1 1221 2367899999999999
Q ss_pred EEE
Q 044171 776 VLK 778 (813)
Q Consensus 776 t~~ 778 (813)
+|+
T Consensus 793 ~l~ 795 (845)
T 3abz_A 793 DLE 795 (845)
T ss_dssp EEE
T ss_pred EeC
Confidence 999
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=60.28 E-value=45 Score=37.93 Aligned_cols=79 Identities=11% Similarity=0.042 Sum_probs=52.7
Q ss_pred CCcEEEeccCccEEEEEEEEecCCCCeeE-EEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCCC-CeEEEEEEE
Q 044171 716 TPSITISNLVGSRKVIRRVRNVSSANETY-TVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNSTR-AYSFGAMVL 793 (813)
Q Consensus 716 ~~s~~~~~~~~~~~~~~tv~N~~~~~~ty-~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~-~~~~G~i~~ 793 (813)
.|.+++.. +++.+++++|+|.+..+..- ++++..+.+.+++. ....+++|++++++|+|+++.... +.|.=-+.+
T Consensus 364 ~~~~~~~~-g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~~~~ 440 (601)
T 1w8o_A 364 IPDVALEP-GQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMPGRQAKGQVTITVPAGTTPGRYRVGATL 440 (601)
T ss_dssp CCCEEECT-TCEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCTTCEEEEEEEEECCTTCCCEEEEEEEEE
T ss_pred CccceecC-CceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCCCCceEEEEEEecCCCCCCCcEEeeEEE
Confidence 45566543 46788888999987644322 33355678887776 356788999999999999987543 344444555
Q ss_pred EeCC
Q 044171 794 QGNN 797 (813)
Q Consensus 794 ~~~~ 797 (813)
...+
T Consensus 441 ~~~~ 444 (601)
T 1w8o_A 441 RTSA 444 (601)
T ss_dssp EETT
T ss_pred EecC
Confidence 5543
No 69
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=57.86 E-value=13 Score=31.00 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=24.5
Q ss_pred EEEEecCeEEEecCcEEEEEEEEEEecCC
Q 044171 755 KVSVSPQVFKIRGLASRELKIVLKATNST 783 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~~~~~vt~~~~~~~ 783 (813)
.|++++.+++|..|++.++++++.+....
T Consensus 8 ~i~l~~~~~~l~vG~t~~L~atv~P~~At 36 (91)
T 2l04_A 8 GMTVTPASTSVVKGQSTTLTVAFQPEGVT 36 (91)
T ss_dssp CEEEECCCEEEETTCEEEEEEEECCSSCC
T ss_pred EEEEeCCceEEEcCCEEEEEEEEeccccC
Confidence 46788899999999999999999886654
No 70
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=54.45 E-value=44 Score=33.50 Aligned_cols=66 Identities=17% Similarity=0.173 Sum_probs=44.7
Q ss_pred CCCCcEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEE-----ecCeEEEecCcEEEEEEEEEEec
Q 044171 714 LNTPSITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSV-----SPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 714 ~n~~s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~-----~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
++.|..... ++...+..+|.|..++..+.++.+....+..... ...+++|++++++++.+.+.+..
T Consensus 86 ~~LP~sv~r--GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~ 156 (252)
T 3hrz_B 86 LQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLE 156 (252)
T ss_dssp ECCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECS
T ss_pred cCCCcEEee--CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEECCCCeEEEEEEEEecc
Confidence 455543332 4567788899999988888777776654433221 13468899999999999988643
No 71
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=52.38 E-value=1e+02 Score=26.39 Aligned_cols=57 Identities=11% Similarity=0.116 Sum_probs=38.0
Q ss_pred cCccEEEEEEEEecCCCCe-eEEEEEeCCCCcEE--------EEecCeE---------EEec-CcEEEEEEEEEEe
Q 044171 724 LVGSRKVIRRVRNVSSANE-TYTVTVKEPSGVKV--------SVSPQVF---------KIRG-LASRELKIVLKAT 780 (813)
Q Consensus 724 ~~~~~~~~~tv~N~~~~~~-ty~~~~~~~~g~~v--------~~~~~~~---------~v~~-g~~~~~~vt~~~~ 780 (813)
..+..+.+++|+|.|..+. .|+++...|.|.+| +-+...+ +|+| |++.+|-+..+-.
T Consensus 13 W~~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it~~Wna~~s~sG~~vt~~n~~wN~~la~~G~s~~fGf~g~~~ 88 (107)
T 3ndz_E 13 WGSGASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGTQSFGFNINYS 88 (107)
T ss_dssp CSSEEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEeCCCCcccCcEEEEEcCCCCEEecccceEEEecCCEEEEEECCcccccCCCCccEEEEEEEeCC
Confidence 4455677889999997664 48898888765433 2233333 3556 8888877777653
No 72
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=50.86 E-value=65 Score=34.06 Aligned_cols=75 Identities=16% Similarity=0.172 Sum_probs=47.3
Q ss_pred ccEEEEEEEEecCCCCeeEE------EEEeC----------C------CCcEEEEecCeEEEecCcEEEEEEEEEEec--
Q 044171 726 GSRKVIRRVRNVSSANETYT------VTVKE----------P------SGVKVSVSPQVFKIRGLASRELKIVLKATN-- 781 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~~~ty~------~~~~~----------~------~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~-- 781 (813)
.+-+++++|||.|+++.... +.... | .| ++ +++ .+.|||+++++|+++-..
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI~PGETrt~~V~a~da~We 372 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VIAPGESKEIVVKIQDARWD 372 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CBCTTCEEEEEEEEECHHHH
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--CcCCCcceEEEEEeehHHHH
Confidence 55678889999999876432 11111 1 13 44 665 899999999999887533
Q ss_pred ---C------CCCeEEEEEEEEeCCcceEEEeE
Q 044171 782 ---S------TRAYSFGAMVLQGNNNHIIRIPI 805 (813)
Q Consensus 782 ---~------~~~~~~G~i~~~~~~~~~l~~P~ 805 (813)
. .+.-..|-|.|....++..-+.+
T Consensus 373 veRL~~l~~D~dSrfgGLLfF~d~~G~r~i~~I 405 (419)
T 3rfr_A 373 IERLSDLAYDTDSQVGGLLFFFTPDGKRFAAEI 405 (419)
T ss_dssp HTTGGGGGGSSSCEEEEEEEEECSSSCEEEEEE
T ss_pred HHHHhhhhcCchhheeEEEEEEcCCCCEEEEec
Confidence 1 12335577777765565544443
No 73
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=50.30 E-value=44 Score=29.01 Aligned_cols=53 Identities=11% Similarity=0.194 Sum_probs=34.6
Q ss_pred CccEEEEEEEEecCCC-CeeEEEEEeCCCCcEEEEecCeE-EEecCcEEEEEEEEEEe
Q 044171 725 VGSRKVIRRVRNVSSA-NETYTVTVKEPSGVKVSVSPQVF-KIRGLASRELKIVLKAT 780 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~-~~ty~~~~~~~~g~~v~~~~~~~-~v~~g~~~~~~vt~~~~ 780 (813)
+...+++.+|+|.|.. ...+++.+... |-.|.- .++ .|.+|+++++.++.++.
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly~~-g~~v~t--~~v~~LaaG~s~tv~~~w~~~ 72 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLLVD-GIVVDT--QTVTSLESENSTNVDFHWTLD 72 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEEET-TEEEEE--EEESCBCBTCEEEEEEEEECC
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEEEC-CEEEcc--eecccccCCCEEEEEEEEeec
Confidence 4567889999999984 35577666542 333222 233 46688888887777655
No 74
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=49.77 E-value=31 Score=28.93 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=31.4
Q ss_pred CccEEEEEEEEecCCCCeeEEEEE---eC----------CCCcEEEE-ecCeEEEecCcEEEEEEE
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTV---KE----------PSGVKVSV-SPQVFKIRGLASRELKIV 776 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~---~~----------~~g~~v~~-~~~~~~v~~g~~~~~~vt 776 (813)
.+..+++++|+|+|+++.-.--++ +. .-|-.+.+ +-..+.+.||+++++++.
T Consensus 17 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 17 TGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp TTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 456677889999999875432111 00 11333333 123678889999988764
No 75
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=42.19 E-value=37 Score=31.42 Aligned_cols=56 Identities=7% Similarity=0.055 Sum_probs=38.1
Q ss_pred EEEEEEEEecCCCCeeEE---EEEeCCCCcEE--EEe----cCe---EEEecCcEEEEEEEEEEecCC
Q 044171 728 RKVIRRVRNVSSANETYT---VTVKEPSGVKV--SVS----PQV---FKIRGLASRELKIVLKATNST 783 (813)
Q Consensus 728 ~~~~~tv~N~~~~~~ty~---~~~~~~~g~~v--~~~----~~~---~~v~~g~~~~~~vt~~~~~~~ 783 (813)
..+.+||+|.|+++.+|+ +.+....|-+. .++ ... =+|.||++++-.|.|++|...
T Consensus 49 viV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~~~~~~~~~~~l~~g~L~pG~kvtG~ivFeVP~~~ 116 (159)
T 3cfu_A 49 LIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRPVFSIEEKGRILMGGTLVSGKKVTGVLSYVIPKGE 116 (159)
T ss_dssp EEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCCEECSTTTTTBCCEEEECTTCEEEEEEEEEESTTC
T ss_pred EEEEEEEEECCCCceeeCcccEEEEeCCCCEEeceeeecccCCcccccccCCCCEEEEEEEEEECCCC
Confidence 456789999999888875 34433333221 111 112 389999999999999999875
No 76
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=41.85 E-value=45 Score=29.18 Aligned_cols=52 Identities=15% Similarity=0.189 Sum_probs=31.2
Q ss_pred CccEEEEEEEEecCCCCeeEEEEE---eCC----------CCcEEEE-ecCeEEEecCcEEEEEEE
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTV---KEP----------SGVKVSV-SPQVFKIRGLASRELKIV 776 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~---~~~----------~g~~v~~-~~~~~~v~~g~~~~~~vt 776 (813)
.+..+++++|+|+|+++.-.--++ +.. -|-.+.+ +-..+.+.||+++++++.
T Consensus 23 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 23 AGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp TTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 355677889999999875432111 011 1323333 123677889999988764
No 77
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=41.85 E-value=45 Score=29.18 Aligned_cols=52 Identities=15% Similarity=0.189 Sum_probs=31.2
Q ss_pred CccEEEEEEEEecCCCCeeEEEEE---eCC----------CCcEEEE-ecCeEEEecCcEEEEEEE
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTV---KEP----------SGVKVSV-SPQVFKIRGLASRELKIV 776 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~---~~~----------~g~~v~~-~~~~~~v~~g~~~~~~vt 776 (813)
.+..+++++|+|+|+++.-.--++ +.. -|-.+.+ +-..+.+.||+++++++.
T Consensus 23 ~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 23 AGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp TTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 355677889999999875432111 011 1323333 123677889999988764
No 78
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=41.08 E-value=73 Score=27.50 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=38.5
Q ss_pred cCccEEEEEEEEecCCCC--eeEEEEEeCCCCcEEEE--ec-CeEEEecCcEEEEEE
Q 044171 724 LVGSRKVIRRVRNVSSAN--ETYTVTVKEPSGVKVSV--SP-QVFKIRGLASRELKI 775 (813)
Q Consensus 724 ~~~~~~~~~tv~N~~~~~--~ty~~~~~~~~g~~v~~--~~-~~~~v~~g~~~~~~v 775 (813)
..+-.+.+.+|+|..+.+ ..|.+..--..|+.|.- +| .+++|+++++.+|.-
T Consensus 36 ~~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~~~~W~~l~l~~~~~~~l~~ 92 (112)
T 3o0l_A 36 EAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEGVSWKSLKLHGKQQMQVTA 92 (112)
T ss_dssp GGGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCTTCCCEEEEECTTCEEEEEE
T ss_pred cCCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCCCCCcEEEEECCCCeEEEEE
Confidence 345677778999999987 56777777778887763 24 579999999665543
No 79
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=39.98 E-value=39 Score=29.74 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=27.2
Q ss_pred EEEEecCCCCee---EEEEEeCC--CCcEEEEecCeEEEecCcEEE
Q 044171 732 RRVRNVSSANET---YTVTVKEP--SGVKVSVSPQVFKIRGLASRE 772 (813)
Q Consensus 732 ~tv~N~~~~~~t---y~~~~~~~--~g~~v~~~~~~~~v~~g~~~~ 772 (813)
++|+|.+.+++. |++..... .....+| |..++|+||++.+
T Consensus 21 V~l~N~s~~~~~L~gW~l~r~v~~~~~~~y~F-p~~~~L~pg~~vt 65 (121)
T 1ifr_A 21 VRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRF-PPKFTLKAGQVVT 65 (121)
T ss_dssp EEEEECSSSCEECTTCEEEEEETTSCCEEEEC-CSSCEECTTCEEE
T ss_pred EEEEeCCCCccccCCCEEEEEcCCCccEEEEe-CCCcEECCCCEEE
Confidence 478898876543 56655533 2367777 7789999999644
No 80
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=38.89 E-value=1.8e+02 Score=30.38 Aligned_cols=79 Identities=10% Similarity=0.085 Sum_probs=46.9
Q ss_pred ccEEEEEEEEecCCCCeeEEE------EEeC----------CC----CcEEEEecCeEEEecCcEEEEEEEEEEec----
Q 044171 726 GSRKVIRRVRNVSSANETYTV------TVKE----------PS----GVKVSVSPQVFKIRGLASRELKIVLKATN---- 781 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~~~ty~~------~~~~----------~~----g~~v~~~~~~~~v~~g~~~~~~vt~~~~~---- 781 (813)
.+-+++++|||.|+++...-= .... |. +--++++++ -.++|||++++.|+++-..
T Consensus 264 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~-~pI~PGETr~~~v~a~da~Weve 342 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDN-SPLAPGETRTVDVTASDAAWEVY 342 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCC-SCBCTTCEEEEEEEEECHHHHHT
T ss_pred cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCC-CCcCCCceeEEEEEeehHHHHHH
Confidence 456788899999997755321 1111 11 001345443 3478999999999887532
Q ss_pred ---C----CCCeEEEEEEEEeCCcceEEEeE
Q 044171 782 ---S----TRAYSFGAMVLQGNNNHIIRIPI 805 (813)
Q Consensus 782 ---~----~~~~~~G~i~~~~~~~~~l~~P~ 805 (813)
. .+.-..|-+.|.+..++..-+.+
T Consensus 343 RL~~l~~D~dSrfgGLLfF~d~~G~r~~~~I 373 (382)
T 1yew_A 343 RLSDIIYDPDSRFAGLLFFFDATGNRQVVQI 373 (382)
T ss_dssp CGGGGGGSSCCEEEEEEEEEETTSCEEEEEE
T ss_pred HhhhhhcCcccceeEEEEEEcCCCCEEEEec
Confidence 0 12335577888776566554444
No 81
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.49 E-value=22 Score=26.94 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=26.8
Q ss_pred CChhhHHHHHHHHHHHhCCCCCHHHHHHHHHcccc
Q 044171 590 SMATPHIAGVAALIKQRHPKWSPAAITSAMMTSAE 624 (813)
Q Consensus 590 SMAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~ 624 (813)
|-..|..--....|++.||+++...|+.+|...-.
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 43444455667889999999999999999976543
No 82
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=38.49 E-value=1.3e+02 Score=36.08 Aligned_cols=56 Identities=11% Similarity=-0.005 Sum_probs=44.2
Q ss_pred CccEEEEEEEEecCC-CCeeEEEEEeCCCCcEEEE-----ecCeEEEecCcEEEEEEEEEEe
Q 044171 725 VGSRKVIRRVRNVSS-ANETYTVTVKEPSGVKVSV-----SPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~-~~~ty~~~~~~~~g~~v~~-----~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
++...+..+|.|..+ +..+.++.+....++.+.- ...+++|++|+++++.+.|.+.
T Consensus 94 GD~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~i~~~ 155 (915)
T 2hr0_B 94 NEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPL 155 (915)
T ss_dssp TCCEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSSSCEEEEEEECTTEEEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCCCcceeEEEECCCCeEEEEEEEEEC
Confidence 466778889999999 9999998887766554321 1357999999999999999964
No 83
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=36.98 E-value=1e+02 Score=39.13 Aligned_cols=66 Identities=11% Similarity=0.028 Sum_probs=49.7
Q ss_pred CCCCCcEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEe---cCeEEEecCcEEEEEEEEEEe
Q 044171 713 DLNTPSITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVS---PQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 713 ~~n~~s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~---~~~~~v~~g~~~~~~vt~~~~ 780 (813)
+++.|-+... ++...+..+|.|..+...+.++.+...+++.+.-. ..+++|++|+++++.+.+.+.
T Consensus 772 ~~~LP~sv~r--GE~~~l~~~V~N~~~~~~~v~V~l~~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~ 840 (1451)
T 4acq_A 772 ELTMPYSVIR--GEAFTLKATVLNYLPKCIRVSVQLEASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPK 840 (1451)
T ss_dssp EEECCSEEES--SSCEEEEEEEEECSSSCEEEEEEECCCTTEEEEESCSCCCCEEECTTEEEEEEEEEEEC
T ss_pred EccCCceEec--CCEEEEEEEEEeccCccEEEEEEEEcCCCeEeecCCCCceEEEECCCCeEEEEEEEEEC
Confidence 3455543332 45677888999999999999998887766665432 468999999999999999965
No 84
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=34.79 E-value=41 Score=39.74 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=42.5
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEe---cCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVS---PQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~---~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
++...+..+|.|..++..+.++.....+++.+... ..+++|++|+++.+.+.|.+..
T Consensus 167 GD~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~v~a~~~~~v~f~i~~~~ 226 (767)
T 4fxk_B 167 FEQLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGLAQQVLVPAGSARPVAFSVVPTA 226 (767)
T ss_dssp TCEEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCCCEEEEECSSCEEECCEEEEECS
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCceeEEEEEcCCCeEEEEEEEEECc
Confidence 45667778999999999998888877665543221 3478899999998888887643
No 85
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=34.21 E-value=47 Score=30.45 Aligned_cols=40 Identities=15% Similarity=0.278 Sum_probs=27.4
Q ss_pred EEEEecCCCCee---EEEEEeCC--CCcEEEEecCeEEEecCcEEE
Q 044171 732 RRVRNVSSANET---YTVTVKEP--SGVKVSVSPQVFKIRGLASRE 772 (813)
Q Consensus 732 ~tv~N~~~~~~t---y~~~~~~~--~g~~v~~~~~~~~v~~g~~~~ 772 (813)
++|+|.+.+++. |++..... .....+| |..++|+||++.+
T Consensus 52 V~L~N~s~~~~~L~GW~L~r~vdg~~~~~y~F-p~~~~L~pg~tVt 96 (151)
T 1ufg_A 52 VRLRNKSNEDQSMGNWQIRRQNGDDPLMTYRF-PPKFTLKAGQVVT 96 (151)
T ss_dssp EEEEECSSSCEECSSCEEEEEETTSCCEEEEC-CTTCEECTTCEEE
T ss_pred EEEEECCCCccccCCCEEEEecCCCccEEEEE-CCCcEECCCCEEE
Confidence 478999886543 56655433 2366777 7789999999644
No 86
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=33.47 E-value=55 Score=29.51 Aligned_cols=54 Identities=11% Similarity=0.185 Sum_probs=32.5
Q ss_pred cEEEeccCccEEEEEEEEecCCCCee---EEEEEeCCC--CcEEEEecCeEEEecCcEEEE
Q 044171 718 SITISNLVGSRKVIRRVRNVSSANET---YTVTVKEPS--GVKVSVSPQVFKIRGLASREL 773 (813)
Q Consensus 718 s~~~~~~~~~~~~~~tv~N~~~~~~t---y~~~~~~~~--g~~v~~~~~~~~v~~g~~~~~ 773 (813)
.+.|..+.-.-.| ++|+|.|.+++. |++.-.... ....+| |..++|+||++.+|
T Consensus 23 ~V~I~E~d~~Gef-V~L~N~s~~~~~L~GW~L~r~v~g~~~~~y~F-p~~~~L~pg~~VtI 81 (139)
T 2lll_A 23 SVSIEEIDLEGKF-VQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKF-TPKYILRAGQMVTV 81 (139)
T ss_dssp SEEEEEECSSCSE-EEEEECSSSCEECSSCEEEEEETTSCEEEEEC-CTTCEECTTCEEEE
T ss_pred CEEEEEECCCCCE-EEEEECCCCccccCCCEEEEecCCCccEEEEE-CCCcEECCCCEEEE
Confidence 3555554322122 479999876543 556554432 356677 77899999996443
No 87
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=32.85 E-value=1.8e+02 Score=24.49 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=43.0
Q ss_pred cEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCCCCeEEEEEEE
Q 044171 718 SITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNSTRAYSFGAMVL 793 (813)
Q Consensus 718 s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~~~~~G~i~~ 793 (813)
.+.+........++++|+|.......|+=.+..|. .+ ++.|..-++.++.+.+.... .++.|+..+
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~--~i-----~IdLnge~sG~Y~IeI~~~~---~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS--IV-----MIDMSSCEKGEYTIHIILND---CLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS--EE-----EEECTTSCSEEEEEEEEETT---EEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc--EE-----EEEcCCCcCceEEEEEEeCC---cEEEEEEEe
Confidence 34443334456677899998877888886555432 22 23344557888888888764 477788765
No 88
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=29.29 E-value=14 Score=32.47 Aligned_cols=49 Identities=14% Similarity=0.316 Sum_probs=31.0
Q ss_pred EEEecCCCCeeEEEEEe-CCCCcEEEEecCeEEEe--cCcEEEEEEEEEEec
Q 044171 733 RVRNVSSANETYTVTVK-EPSGVKVSVSPQVFKIR--GLASRELKIVLKATN 781 (813)
Q Consensus 733 tv~N~~~~~~ty~~~~~-~~~g~~v~~~~~~~~v~--~g~~~~~~vt~~~~~ 781 (813)
-++|.+.+..+..+.+. .|.|++++++|++++|. .-.+++|.|+++...
T Consensus 60 DLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 60 DLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp ECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred ECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 34454433333334455 68899999999977664 667777777766543
No 89
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=28.81 E-value=69 Score=28.11 Aligned_cols=21 Identities=5% Similarity=-0.009 Sum_probs=13.4
Q ss_pred EEEEecCeEEEecCcEEEEEE
Q 044171 755 KVSVSPQVFKIRGLASRELKI 775 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~~~~~v 775 (813)
...|+|+.|+|++|++.++.+
T Consensus 15 ~~~F~P~~i~V~~GdtV~f~~ 35 (123)
T 3erx_A 15 AMVFEPAFVRAEPGDVINFVP 35 (123)
T ss_dssp EEEEESSEEEECTTEEEEEEE
T ss_pred cEeEeCCEEEECCCCEEEEEE
Confidence 566677777777777554444
No 90
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=28.14 E-value=3.1e+02 Score=27.27 Aligned_cols=55 Identities=24% Similarity=0.267 Sum_probs=37.6
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEeCC------C--CcEEEEecCeEEEecCcEEEEEEEEEEe
Q 044171 726 GSRKVIRRVRNVSSANETYTVTVKEP------S--GVKVSVSPQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~~~ty~~~~~~~------~--g~~v~~~~~~~~v~~g~~~~~~vt~~~~ 780 (813)
+.+..+++|+|.++.+.-.+.-++.. + ..-+.++|.-+.|.||+++.+.|..+..
T Consensus 42 ~~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYLKA 104 (257)
T ss_dssp TCSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEECCC
T ss_pred CCcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEECCC
Confidence 34556779999987543333323321 1 2348889999999999999999976543
No 91
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=27.40 E-value=35 Score=30.50 Aligned_cols=36 Identities=3% Similarity=0.128 Sum_probs=21.3
Q ss_pred CCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEE
Q 044171 740 ANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIV 776 (813)
Q Consensus 740 ~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt 776 (813)
...++++.+..... ...++|+.|+|++|++.+|.++
T Consensus 15 ~~~~~~V~v~~~~~-~~~F~p~~i~v~~G~~V~~~~~ 50 (139)
T 2aan_A 15 GSGPVTIEIGSKGE-ELAFDKTELTVSAGQTVTIRFK 50 (139)
T ss_dssp --CCEEEEEEBCTT-SSSBSCSEEEECTTCEEEEEEE
T ss_pred CCcCEEEEEEecCC-ccEEcCCeEEECCCCEEEEEEE
Confidence 44455555421111 3557789999999987666554
No 92
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=26.54 E-value=48 Score=30.53 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=26.9
Q ss_pred eeeccCChhhHHHHHHHHHHHhCCCCCHHHHHH
Q 044171 585 LLSGTSMATPHIAGVAALIKQRHPKWSPAAITS 617 (813)
Q Consensus 585 ~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~ 617 (813)
.+.|-| =|+.|-|++|||++.+-..+|++|.+
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 344555 47999999999999999999999865
No 93
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=26.23 E-value=1.4e+02 Score=34.36 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=41.7
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCC----CC---cEEEEecCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEP----SG---VKVSVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~----~g---~~v~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+....+.++++|.+++..+-++..... .| ..+.-...+++|+|++++++.+++....
T Consensus 495 G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y~~ 558 (692)
T 1vjj_A 495 GKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISYAQ 558 (692)
T ss_dssp TSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECHHH
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECHHH
Confidence 456778889999999877766654421 23 3455555689999999999999998753
No 94
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=26.12 E-value=4.2e+02 Score=25.51 Aligned_cols=54 Identities=9% Similarity=0.086 Sum_probs=36.6
Q ss_pred ccEEEEEEEEecCCC-CeeEEEEEeCCC-----CcEEEEecCeEEEecCcEEEEEEEEEE
Q 044171 726 GSRKVIRRVRNVSSA-NETYTVTVKEPS-----GVKVSVSPQVFKIRGLASRELKIVLKA 779 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~-~~ty~~~~~~~~-----g~~v~~~~~~~~v~~g~~~~~~vt~~~ 779 (813)
+.+..+++|+|.++. +.--..-++... ..-+-++|.-+.|.||++..+.|..+.
T Consensus 14 ~~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 14 SEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTP 73 (218)
T ss_dssp TSSEEEEEEEECCSSSCEEEEEEEECTTSCEECSSSEEEECSEEEECTTCEEEEEEEECG
T ss_pred CCCEEEEEEEcCCCCCcEEEEEEEecCCCCccccCCEEEcCCeEEECCCCceEEEEEecC
Confidence 345567799998864 433333333221 123678899999999999999997765
No 95
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=25.79 E-value=1.8e+02 Score=24.90 Aligned_cols=58 Identities=12% Similarity=0.112 Sum_probs=27.9
Q ss_pred cEEEeccCccEEEEEEEEecCCCCeeEEEEEe-----CCCCcEEEEecCeEEEecCcE-EEEEEEE
Q 044171 718 SITISNLVGSRKVIRRVRNVSSANETYTVTVK-----EPSGVKVSVSPQVFKIRGLAS-RELKIVL 777 (813)
Q Consensus 718 s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~-----~~~g~~v~~~~~~~~v~~g~~-~~~~vt~ 777 (813)
++.+.+-.+..+++++.+. ....+.++.+. +.+|........+|+++||++ ++|+|.+
T Consensus 11 ~y~V~E~~g~~~v~V~R~g--~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I 74 (114)
T 3e9t_A 11 HYTVMENCGEFEVRVVRRG--DISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEV 74 (114)
T ss_dssp EEEEETTCCEEEEEEEEEE--CCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEB
T ss_pred EEEEEcCCeEEEEEEEEEC--CCCeeEEEEEEeECCccCCCCCceEcceEEEEeCCcEEEEEEEEE
Confidence 3444443445555444443 33333344333 123333333346899999975 4444444
No 96
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=25.61 E-value=89 Score=27.48 Aligned_cols=25 Identities=12% Similarity=0.191 Sum_probs=16.3
Q ss_pred CCcEEEEecCeEEEecCcEEEEEEE
Q 044171 752 SGVKVSVSPQVFKIRGLASRELKIV 776 (813)
Q Consensus 752 ~g~~v~~~~~~~~v~~g~~~~~~vt 776 (813)
.|-.+.|+|..|+|++|.+.++..+
T Consensus 13 ~G~~~~F~P~~i~V~~GDTV~f~n~ 37 (124)
T 3ef4_A 13 AGNTMVFQPGFVKVEAGDTVKFVPT 37 (124)
T ss_dssp TSCEEEEESSEEEECTTCEEEEECS
T ss_pred CCceeEEeCCEEEECCCCEEEEEEC
Confidence 3435667777888888876655543
No 97
>1una_A GA unassembled coat protein dimer; unassembled virus coat protein dimer, bacteriophage, RNA- binding dimer, translational repressor; 2.80A {Enterobacteria phage GA} SCOP: d.85.1.1 PDB: 1gav_A
Probab=25.48 E-value=2.8e+02 Score=22.90 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=35.0
Q ss_pred CcEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCCCC
Q 044171 717 PSITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNSTRA 785 (813)
Q Consensus 717 ~s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~~~ 785 (813)
.+|.+..-+++-.+++.-.|..+.-..|--+-+....-+|+- ++.-..-+.++.++++++|+...+
T Consensus 4 ~~fvlvdnggtg~vtv~p~~~angvaewis~nsrsqaykvt~---s~r~s~a~~rkytik~evpkv~tq 69 (129)
T 1una_A 4 HSFVLVDNGGTGNVTVVPVSNANGVAEWLSNNSRSQAYRVTA---SYRASGADKRKYTIKLEVPKIVTQ 69 (129)
T ss_dssp CCEEEECSSSSSCEEEEEEECGGGCEEEEESSCGGGCCEEEE---EEEEETTTEEEEEEEEEEECCC--
T ss_pred eEEEEEecCCccceEEeeccccchHHHHhhcCcccceeEEEE---EeeecccccceeEEEEecchhhee
Confidence 345555555565555555555554444432222122223333 234445689999999999987543
No 98
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=25.02 E-value=3.2e+02 Score=23.21 Aligned_cols=56 Identities=23% Similarity=0.185 Sum_probs=36.3
Q ss_pred cCccEEEEEEEEecCCCC-eeEEEEEeCCCCcEEE--------EecCeE---------EEecCcEEEEEEEEEE
Q 044171 724 LVGSRKVIRRVRNVSSAN-ETYTVTVKEPSGVKVS--------VSPQVF---------KIRGLASRELKIVLKA 779 (813)
Q Consensus 724 ~~~~~~~~~tv~N~~~~~-~ty~~~~~~~~g~~v~--------~~~~~~---------~v~~g~~~~~~vt~~~ 779 (813)
..+..+..++|+|.+..+ ..|+++...|.|.+|+ -+-..+ +|+||++.+|-++.+-
T Consensus 17 W~~Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG~~vt~~n~~wN~~la~G~s~~fGf~~~~ 90 (110)
T 1exg_A 17 WNTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSGSAVTVRNAPWNGSIPAGGTAQFGFNGSH 90 (110)
T ss_dssp SSSEEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEETTEEEEEECSGGGEECSSEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccCCEEEEecccccceeCCCcEEEEEEEEeC
Confidence 455567788999998865 4688888877654432 222222 4567887777666653
No 99
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=24.76 E-value=1.3e+02 Score=26.75 Aligned_cols=58 Identities=14% Similarity=0.158 Sum_probs=27.4
Q ss_pred cEEEeccCccEEEEEEEEecCCCCeeEEEEEeC-----CCCcEEEEecCeEEEecCcE-EEEEEEE
Q 044171 718 SITISNLVGSRKVIRRVRNVSSANETYTVTVKE-----PSGVKVSVSPQVFKIRGLAS-RELKIVL 777 (813)
Q Consensus 718 s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~-----~~g~~v~~~~~~~~v~~g~~-~~~~vt~ 777 (813)
++.+.+-.+..++ +|+-.|....+.++.+.. ..|........+|+++||++ ++|+|.+
T Consensus 13 ~y~V~E~~g~~~v--~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I 76 (137)
T 3ead_A 13 HYTVMENCGEFEV--RVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEV 76 (137)
T ss_dssp EEEEEGGGCEEEE--EEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEB
T ss_pred EEEEECCCeEEEE--EEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceEEEEEEEE
Confidence 4444443444444 444444444444444331 22333332345788889865 4444443
No 100
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=24.10 E-value=1.5e+02 Score=34.17 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=41.8
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCC----CC---cEEEEecCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEP----SG---VKVSVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~----~g---~~v~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+....+.++++|.+++..+-++..... .| ..+.-..-+++|+|++++++.+++....
T Consensus 530 G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y~~ 593 (731)
T 1ex0_A 530 GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQAGE 593 (731)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECHHH
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECHHH
Confidence 456778889999999877766654321 23 3455556689999999999999998754
No 101
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=23.75 E-value=1e+02 Score=27.00 Aligned_cols=17 Identities=12% Similarity=0.075 Sum_probs=9.6
Q ss_pred EEEEecCeEEEecCcEE
Q 044171 755 KVSVSPQVFKIRGLASR 771 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~~ 771 (813)
...|+|..|+|++|++.
T Consensus 15 ~~~F~P~~i~V~~GdtV 31 (123)
T 1paz_A 15 AMVFEPAYIKANPGDTV 31 (123)
T ss_dssp EEEEESSEEEECTTCEE
T ss_pred CceEeCCEEEECCCCEE
Confidence 45555666666666543
No 102
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=23.06 E-value=1.5e+02 Score=34.06 Aligned_cols=57 Identities=5% Similarity=0.114 Sum_probs=41.5
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCC----CCc---EE-EEecCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEP----SGV---KV-SVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~----~g~---~v-~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+....+.++++|.+++..+-++..... .|+ .+ .-..-+++|+|++++++.+++....
T Consensus 486 G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y~~ 550 (687)
T 2q3z_A 486 GSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILYEK 550 (687)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECHHH
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECHHH
Confidence 456778889999999887766654431 233 44 3355689999999999999998754
No 103
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.06 E-value=46 Score=30.11 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=27.8
Q ss_pred eeeeccCChhhHHHHHHHHHHHhCCCCCHHHHHH
Q 044171 584 ALLSGTSMATPHIAGVAALIKQRHPKWSPAAITS 617 (813)
Q Consensus 584 ~~~sGTSMAaP~VAG~aALl~q~~p~~s~~~ik~ 617 (813)
..+.|-| =|+.|-|++|||++.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4556666 47999999999999999999999864
No 104
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=23.04 E-value=56 Score=27.17 Aligned_cols=18 Identities=28% Similarity=0.298 Sum_probs=11.8
Q ss_pred EecCeEEEecCcEEEEEE
Q 044171 758 VSPQVFKIRGLASRELKI 775 (813)
Q Consensus 758 ~~~~~~~v~~g~~~~~~v 775 (813)
++|+.|+|++|++.++.+
T Consensus 25 F~P~~i~v~~G~tV~~~~ 42 (100)
T 4hci_A 25 FNPNVITIPINESTTLLL 42 (100)
T ss_dssp EESSEEEECTTSCEEEEE
T ss_pred EeCCEEEECCCCEEEEEE
Confidence 567777777777655544
No 105
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=23.00 E-value=1.1e+02 Score=27.09 Aligned_cols=20 Identities=10% Similarity=0.167 Sum_probs=12.2
Q ss_pred EEEEecCeEEEecCcEEEEE
Q 044171 755 KVSVSPQVFKIRGLASRELK 774 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~~~~~ 774 (813)
...|+|..|+|++|.+.+|.
T Consensus 17 ~~~F~P~~i~V~~GDtVtf~ 36 (127)
T 3tu6_A 17 VMAFEPAVIRAQPGDTVTFV 36 (127)
T ss_dssp EEEEESSEEEECTTCEEEEE
T ss_pred ccEEeCCEEEECCCCEEEEE
Confidence 45666667777777654443
No 106
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=22.21 E-value=2.2e+02 Score=36.64 Aligned_cols=66 Identities=18% Similarity=0.209 Sum_probs=46.8
Q ss_pred CCCCCcEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEe-----cCeEEEecCcEEEEEEEEEEe
Q 044171 713 DLNTPSITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVS-----PQVFKIRGLASRELKIVLKAT 780 (813)
Q Consensus 713 ~~n~~s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~-----~~~~~v~~g~~~~~~vt~~~~ 780 (813)
+++.|-.... ++...+..+|.|..++..+.++.+...+++...-. ..+++|++|+++++.+.+.+.
T Consensus 817 ~l~LPysv~r--GEq~~l~v~VfNy~~~~~~V~V~L~~s~~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~ 887 (1642)
T 3prx_B 817 DLQMPYSVVK--NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPL 887 (1642)
T ss_dssp ECCCCSCEET--TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSSCCEEEEEECSSEEEEEEEEEEEC
T ss_pred EccCCCEEec--CCEEEEEEEEEcCCCCcEEEEEEEEcCCCeEeeccCCCcceeEEEECCCCeEEEEEEEEEe
Confidence 4566643332 45677888999999988888888776555443211 247899999999999988864
No 107
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=21.81 E-value=1.4e+02 Score=34.19 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=40.6
Q ss_pred CccEEEEEEEEecCCCCeeEEEEEeCC----CC---cEEEEecCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSANETYTVTVKEP----SG---VKVSVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~~ty~~~~~~~----~g---~~v~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+....+.++++|.+++..+-++..... .| ..+....-+++|+|++++++.+++....
T Consensus 485 G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y~~ 548 (695)
T 1g0d_A 485 GTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHYDD 548 (695)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECHHH
T ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECHHH
Confidence 456677889999999887766654321 12 2344445689999999999999998754
No 108
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=21.80 E-value=41 Score=29.63 Aligned_cols=56 Identities=25% Similarity=0.246 Sum_probs=32.8
Q ss_pred CccEEEEEEEEecCCCC-eeEEEEEeC--CC--CcEEEEecCeEEEecCcEEEEEEEEEEec
Q 044171 725 VGSRKVIRRVRNVSSAN-ETYTVTVKE--PS--GVKVSVSPQVFKIRGLASRELKIVLKATN 781 (813)
Q Consensus 725 ~~~~~~~~tv~N~~~~~-~ty~~~~~~--~~--g~~v~~~~~~~~v~~g~~~~~~vt~~~~~ 781 (813)
+...+|+.||+|.|... ..+++.+.. |. |..+.-. ..=.|++|++.+++|+++++.
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~vgt~-tv~~LaaG~s~t~~v~~~~~~ 75 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVEIGRD-TISRIPVGGTGLARVQWKATR 75 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCCCBCC-CCSCBCTTCEEECCEEEECCC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeEEeeE-EccccCCCCeEEEEEEEecCC
Confidence 45678888999999853 233344332 21 1222110 011478999999888887763
No 109
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=21.74 E-value=1.6e+02 Score=25.63 Aligned_cols=25 Identities=12% Similarity=0.062 Sum_probs=14.6
Q ss_pred CcEEEEecCeEEEecCcE-EEEEEEE
Q 044171 753 GVKVSVSPQVFKIRGLAS-RELKIVL 777 (813)
Q Consensus 753 g~~v~~~~~~~~v~~g~~-~~~~vt~ 777 (813)
|........+|+++||++ ++|+|.+
T Consensus 52 g~Dy~~~~g~l~F~~Get~k~i~V~I 77 (123)
T 3fso_A 52 NRDYIPVEGELLFQPGEAWKELQVKL 77 (123)
T ss_dssp TTTBCCCEEEEEECTTCCEEEEEEEB
T ss_pred CccccccceEEEECCCCeEEEEEEEE
Confidence 433333456899999976 4444443
No 110
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=20.57 E-value=5e+02 Score=24.69 Aligned_cols=52 Identities=21% Similarity=0.314 Sum_probs=35.6
Q ss_pred ccEEEEEEEEecCCC-CeeEEEEEeCC---CCcEEEEecCeEEEecCcEEEEEEEE
Q 044171 726 GSRKVIRRVRNVSSA-NETYTVTVKEP---SGVKVSVSPQVFKIRGLASRELKIVL 777 (813)
Q Consensus 726 ~~~~~~~tv~N~~~~-~~ty~~~~~~~---~g~~v~~~~~~~~v~~g~~~~~~vt~ 777 (813)
+.+..+++|+|.++. +.--..-++.. ...-+-++|.-+.|.||++..+.|..
T Consensus 14 ~~k~~sl~l~N~~~~~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~ 69 (205)
T 1klf_A 14 GQKQVQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILD 69 (205)
T ss_dssp TCSEEEEEEEECCSSCCEEEEEEEEETTSCCCSSEEEESSEEEECSSEEEEEEEEE
T ss_pred CCcEEEEEEEcCCCCCcEEEEEEEecCCCCccCCEEEcCCeEEECCCCceEEEEEe
Confidence 345567799998864 43333222221 12457788999999999999999987
No 111
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=20.31 E-value=1.4e+02 Score=24.18 Aligned_cols=19 Identities=16% Similarity=0.191 Sum_probs=14.3
Q ss_pred EEEEecCeEEEecCcEEEE
Q 044171 755 KVSVSPQVFKIRGLASREL 773 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~~~~ 773 (813)
...++|..|+|++|++.+|
T Consensus 13 ~~~F~P~~i~v~~G~~V~~ 31 (97)
T 1b3i_A 13 APLYEPKALSISAGDTVEF 31 (97)
T ss_dssp EEEEESSEEEECTTCEEEE
T ss_pred ccEEeCCEEEECCCCEEEE
Confidence 5778888888888886433
No 112
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=20.29 E-value=1.1e+02 Score=26.83 Aligned_cols=16 Identities=13% Similarity=0.277 Sum_probs=8.1
Q ss_pred EEEEecCeEEEecCcE
Q 044171 755 KVSVSPQVFKIRGLAS 770 (813)
Q Consensus 755 ~v~~~~~~~~v~~g~~ 770 (813)
...|+|..|+|++|.+
T Consensus 15 ~~~F~P~~i~V~~Gdt 30 (123)
T 1pmy_A 15 MMVFDPALVRLKPGDS 30 (123)
T ss_dssp EEEEESSEEEECTTCE
T ss_pred CceEeCCEEEECCCCE
Confidence 3445555555555554
No 113
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=20.18 E-value=4.2e+02 Score=25.58 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=35.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEEeCC---CCcEEEEecCeEEEecCcEEEEEEEEEE
Q 044171 727 SRKVIRRVRNVSSANETYTVTVKEP---SGVKVSVSPQVFKIRGLASRELKIVLKA 779 (813)
Q Consensus 727 ~~~~~~tv~N~~~~~~ty~~~~~~~---~g~~v~~~~~~~~v~~g~~~~~~vt~~~ 779 (813)
.+..+++|+|.++.+.--..-++.. ...-+-++|.-+.|.||++..+.|..+.
T Consensus 27 ~k~~sl~l~N~~~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 27 TAGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp SSCEEEEEECCSSSCEEEEEEEEETTSSSBCSEEEESSEEEECTTCEEEEEEEECC
T ss_pred CCEEEEEEEcCCCCcEEEEEEEecCCCCccCCEEEeCCEEEECCCCceEEEEEECC
Confidence 3445668999886543222222221 1235778899999999999999998764
No 114
>1msc_A Bacteriophage MS2 coat protein; translation repressor, viral protein; 2.00A {Enterobacterio phage MS2} SCOP: d.85.1.1 PDB: 2bu1_A* 1u1y_A 1zdi_A 1zdj_A 1zdk_A 1zdh_A* 2c4q_A* 2c4y_A* 2c4z_A* 2c50_A 2c51_A 2iz8_A 2iz9_A* 2izm_A 2izn_A 2ms2_A 5msf_A 6msf_A 7msf_A 1aq3_A ...
Probab=20.13 E-value=1.9e+02 Score=24.00 Aligned_cols=66 Identities=12% Similarity=0.166 Sum_probs=35.2
Q ss_pred CCCcEEEeccCccEEEEEEEEecCCCCeeEEEEEeCCCCcEEEEecCeEEEecCcEEEEEEEEEEecCC
Q 044171 715 NTPSITISNLVGSRKVIRRVRNVSSANETYTVTVKEPSGVKVSVSPQVFKIRGLASRELKIVLKATNST 783 (813)
Q Consensus 715 n~~s~~~~~~~~~~~~~~tv~N~~~~~~ty~~~~~~~~g~~v~~~~~~~~v~~g~~~~~~vt~~~~~~~ 783 (813)
|+.+|.+..-+++-.+++.-.|..+.-..|--+-+....-+|+- ++.-..-+.++.++++++|+..
T Consensus 3 n~~~fvlvdnggtg~vtv~p~~~angvaewis~nsrsqaykvt~---s~r~s~a~~rkytik~evpkv~ 68 (129)
T 1msc_A 3 NFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTC---SVRQSSAQNRKYTIKVEVPKVA 68 (129)
T ss_dssp CCCCEEEECCSSTTCEEEEEEEEETTEEEEECSTTSSCCCEEEE---EEEESSTTEEEEEEEEEECCSC
T ss_pred cceEEEEEecCCccceEEeeccccchHHHHhhcCcccceeEEEE---EeeecccccceeEEEEecchhh
Confidence 44566665556665555554555443333322111112223332 2333455899999999999864
No 115
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=20.09 E-value=1.3e+02 Score=26.38 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=27.1
Q ss_pred EEEEecCCCCee---EEEEEeCCCC-cEEEEecCeEEEecCcEEEE
Q 044171 732 RRVRNVSSANET---YTVTVKEPSG-VKVSVSPQVFKIRGLASREL 773 (813)
Q Consensus 732 ~tv~N~~~~~~t---y~~~~~~~~g-~~v~~~~~~~~v~~g~~~~~ 773 (813)
++|+|.+.+++. |++....... ...+| |..++|+||++.+|
T Consensus 27 V~L~N~s~~~~~L~gW~l~r~v~~~~~~y~F-p~~~~L~pg~~vtV 71 (123)
T 3hn9_A 27 IRLKNTSEQDQPMGGWEMIRKIGDTSVSYKY-TSRYVLKAGQTVTI 71 (123)
T ss_dssp EEEEECSSSCEECTTCEEEEEETTEEEEEEC-CTTCEECTTCEEEE
T ss_pred EEEEECCCCceecCCcEEEEEeCCCceEEEc-CCCcEECCCCEEEE
Confidence 478999886654 6666554321 23555 77889999997544
No 116
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=20.02 E-value=3.3e+02 Score=30.08 Aligned_cols=58 Identities=10% Similarity=0.116 Sum_probs=39.5
Q ss_pred cCccEEEEEEEEecCCCCe-eEEEEEeCCCCcEE--------EEecCeE---------EEec-CcEEEEEEEEEEec
Q 044171 724 LVGSRKVIRRVRNVSSANE-TYTVTVKEPSGVKV--------SVSPQVF---------KIRG-LASRELKIVLKATN 781 (813)
Q Consensus 724 ~~~~~~~~~tv~N~~~~~~-ty~~~~~~~~g~~v--------~~~~~~~---------~v~~-g~~~~~~vt~~~~~ 781 (813)
..+..+.++||+|.|..+. .|+++...|.|.+| +-+...+ +|+| |++.+|-++.+-..
T Consensus 393 W~~g~~~~v~v~n~~~~~~~~W~~~~~~~~~~~i~~~wn~~~~~~g~~~~~~~~~~n~~~~~~g~s~~~gf~~~~~g 469 (515)
T 3icg_A 393 WGSGASVNVTIKNNGTTPINGWTLKWTMPINQTITNMWSASFVASGTTLSVTNAGYNGTIAANGGTQSFGFNINYSG 469 (515)
T ss_dssp CSSEEEEEEEEEECSSSCEESCEEEEECCTTEEEEEEESEEEEEETTEEEEEECSTTCEECTTTEEEEEEEEEEECS
T ss_pred CCCccEEEEEEEeCCCCCcCCeEEEEEeCCCCEeeccccceEEecCCeEEEecCccccccCCCCceEEEEEEEeCCC
Confidence 4455677889999998664 48888887765433 3333334 5667 89988888887543
Done!