Query 044173
Match_columns 455
No_of_seqs 131 out of 1281
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 12:08:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044173.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044173hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03157 spermidine hydroxycin 100.0 3.9E-75 8.5E-80 593.2 41.1 418 4-445 1-441 (447)
2 PLN02663 hydroxycinnamoyl-CoA: 100.0 3E-73 6.4E-78 577.6 40.4 415 4-446 1-427 (431)
3 PLN00140 alcohol acetyltransfe 100.0 4.5E-73 9.7E-78 576.4 37.7 421 4-454 1-436 (444)
4 PLN02481 Omega-hydroxypalmitat 100.0 1.3E-72 2.7E-77 572.7 38.9 411 4-446 12-432 (436)
5 PF02458 Transferase: Transfer 100.0 7.1E-73 1.5E-77 577.0 30.4 420 4-450 1-432 (432)
6 PRK09294 acyltransferase PapA5 99.5 6.1E-11 1.3E-15 120.5 28.2 314 25-391 6-346 (416)
7 PF07247 AATase: Alcohol acety 98.9 7.4E-07 1.6E-11 92.4 25.1 193 153-351 124-365 (480)
8 COG4908 Uncharacterized protei 98.8 3.2E-07 6.9E-12 88.3 19.2 276 32-350 18-317 (439)
9 TIGR02946 acyl_WS_DGAT acyltra 98.5 8.1E-06 1.8E-10 83.8 18.5 255 68-351 32-327 (446)
10 PF00668 Condensation: Condens 98.5 2.9E-06 6.2E-11 81.6 13.5 262 25-328 3-298 (301)
11 PRK10252 entF enterobactin syn 98.0 0.00053 1.2E-08 79.9 22.4 249 68-351 44-322 (1296)
12 PRK12316 peptide synthase; Pro 97.8 0.001 2.2E-08 86.7 21.0 256 68-351 86-367 (5163)
13 PRK12467 peptide synthase; Pro 97.8 0.0029 6.4E-08 81.0 23.8 256 68-351 2682-2956(3956)
14 PRK12467 peptide synthase; Pro 97.7 0.0034 7.4E-08 80.5 23.1 256 68-351 86-367 (3956)
15 PRK12316 peptide synthase; Pro 97.5 0.0091 2E-07 78.3 23.2 251 68-351 2639-2916(5163)
16 PRK05691 peptide synthase; Val 97.5 0.009 1.9E-07 77.4 22.9 256 68-351 1765-2046(4334)
17 PRK05691 peptide synthase; Val 97.2 0.036 7.8E-07 72.1 23.3 256 68-351 712-993 (4334)
18 PF03007 WES_acyltransf: Wax e 95.5 0.059 1.3E-06 51.1 8.4 131 41-192 19-154 (263)
19 PF07428 Tri3: 15-O-acetyltran 91.4 0.8 1.7E-05 44.1 7.5 85 241-328 269-356 (413)
20 PRK13757 chloramphenicol acety 73.5 3.6 7.8E-05 37.7 3.4 29 167-195 185-213 (219)
21 PF00302 CAT: Chloramphenicol 70.8 3.6 7.9E-05 37.3 2.8 39 152-190 164-205 (206)
22 PRK11856 branched-chain alpha- 61.2 7.8 0.00017 39.3 3.3 29 167-195 375-403 (411)
23 PRK11855 dihydrolipoamide acet 55.1 11 0.00025 39.7 3.4 29 167-195 512-540 (547)
24 PF00198 2-oxoacid_dh: 2-oxoac 50.1 19 0.0004 33.4 3.6 30 166-195 195-224 (231)
25 PRK11857 dihydrolipoamide acet 43.8 23 0.0005 34.3 3.2 29 167-195 270-298 (306)
26 PRK11854 aceF pyruvate dehydro 43.6 21 0.00046 38.4 3.3 29 167-195 598-626 (633)
27 TIGR01349 PDHac_trf_mito pyruv 42.4 24 0.00052 36.1 3.3 29 167-195 400-428 (435)
28 PLN02528 2-oxoisovalerate dehy 42.0 25 0.00055 35.7 3.4 29 167-195 378-406 (416)
29 PRK14843 dihydrolipoamide acet 41.3 26 0.00056 34.6 3.2 29 167-195 312-340 (347)
30 PTZ00144 dihydrolipoamide succ 40.3 27 0.00059 35.3 3.3 30 166-195 380-409 (418)
31 PRK05704 dihydrolipoamide succ 40.2 28 0.00061 35.2 3.4 29 167-195 370-398 (407)
32 TIGR01347 sucB 2-oxoglutarate 38.7 30 0.00065 35.0 3.3 29 167-195 366-394 (403)
33 PLN02226 2-oxoglutarate dehydr 36.4 34 0.00073 35.1 3.2 29 167-195 426-454 (463)
34 TIGR02927 SucB_Actino 2-oxoglu 35.4 35 0.00076 36.4 3.3 29 167-195 552-580 (590)
35 PF01402 RHH_1: Ribbon-helix-h 33.6 1.2E+02 0.0026 18.8 5.6 34 243-282 2-35 (39)
36 TIGR01348 PDHac_trf_long pyruv 32.7 41 0.0009 35.5 3.3 29 167-195 511-539 (546)
37 PLN02744 dihydrolipoyllysine-r 31.7 42 0.00092 35.2 3.2 30 166-195 503-532 (539)
38 COG4845 Chloramphenicol O-acet 30.7 58 0.0013 29.2 3.3 45 151-195 165-212 (219)
39 KOG1212 Amidases [Translation, 22.2 78 0.0017 33.2 3.0 36 248-289 53-88 (560)
40 PF08252 Leader_CPA1: arg-2/CP 21.6 1.2E+02 0.0025 16.9 2.2 18 268-285 6-23 (24)
No 1
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=100.00 E-value=3.9e-75 Score=593.24 Aligned_cols=418 Identities=26% Similarity=0.427 Sum_probs=336.8
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhc
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFY 83 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (455)
|.|+|+++++|+|+.|++. +.++||.||+..+. .|++.+|||+.+.. . ...+++++||+||+++|++||
T Consensus 1 ~~v~~~~~~~v~Ps~ptp~--~~~~LS~lD~~~~~-~~v~~v~fy~~~~~---~-----~~~~~~~~Lk~sLs~~L~~fy 69 (447)
T PLN03157 1 MVVILKASYTVKPAKPTWT--GRRSLSEWDQVGTI-THVPTIYFYSPPWN---T-----SSGSIIEILKDSLSRALVPFY 69 (447)
T ss_pred CeEEEeccEEECCCCCCCC--CccCCChhhhcccc-ccCCEEEEEeCCCc---c-----ccccHHHHHHHHHHHHHhhcc
Confidence 5799999999999999874 57999999998765 69999999976532 0 023568999999999999999
Q ss_pred CCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEe
Q 044173 84 PLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTEL 163 (455)
Q Consensus 84 ~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~ 163 (455)
+|||||+..++ | +++|+| +++||.|++|+++.+++|+....+. ..+++|+|..+. .....+.|++.||||.|
T Consensus 70 plAGRl~~~~~----g-~~~i~c-~~~Gv~fveA~~~~~l~~~~~~~~~-~~~~~l~P~~~~-~~~~~~~Pll~vQvT~F 141 (447)
T PLN03157 70 PLAGRLRWIGG----G-RLELEC-NAMGVLLIEAESEAKLDDFGDFSPT-PEFEYLIPSVDY-TKPIHELPLLLVQLTKF 141 (447)
T ss_pred ccCEEEEEcCC----C-cEEEEE-CCCCeEEEEEEeCCcHHHhhccCCC-HHHHhhcCCCCc-ccccccCceEEEEEEEe
Confidence 99999998765 6 899999 9999999999999999999643211 235567775321 11123579999999999
Q ss_pred -eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccC-C--CCcc--cc-cc---
Q 044173 164 -VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRWFPDGRDPIINLP-F--THRD--EF-IR--- 233 (455)
Q Consensus 164 -~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~~~~~~~~~~~~p-~--~~~~--~~-~~--- 233 (455)
|||++||+++||.++||.|+.+|+++||++|| | .+...+|++||.++..++++...+ + ..+. .. ..
T Consensus 142 ~cGG~~lg~~~~H~v~Dg~~~~~fl~aWA~~~r--g--~~~~~~P~~dR~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 217 (447)
T PLN03157 142 SCGGISLGLGISHAVADGQSALHFISEWARIAR--G--EPLGTVPFLDRKVLRAGEPPLSAPVFDHAEFSHPPLLIGEQD 217 (447)
T ss_pred cCCCEEEEEEeeccccchHhHHHHHHHHHHHhc--C--CCCCCCCccCcccccCCCCCCcCCccChhhcccCcccccccc
Confidence 89999999999999999999999999999999 7 234557999998776554442111 1 1110 00 00
Q ss_pred c--CCCCCceeEEEEeCHHHHHHHHHHHhhhcC-CCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCC
Q 044173 234 R--YEAPQLLERIFHFTGESIARLKAKANAEAG-NNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEP 310 (455)
Q Consensus 234 ~--~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~-~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p 310 (455)
. ....+.+.++|+|++++|++||+++..++. .+..++|++|+|+||+|+|++|||+..++..+.+.++||+|+|++|
T Consensus 218 ~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~~~~St~dalsA~lWr~~~rAr~~~~~~~~~l~~~vd~R~rl~P 297 (447)
T PLN03157 218 NVEERKKKTTVAMLKLSKDQVEKLKDKANESRSSDNGRPYTRYETVAGHVWRSACKARGHEPEQPTALGICVDSRSRMQP 297 (447)
T ss_pred cccccccCceEEEEEECHHHHHHHHHhCcccccccCCCCccHHHHHHHHHHHHHHHHccCCCCCceEEEEEecCCCCCCC
Confidence 0 012457789999999999999999976532 1235799999999999999999998777789999999999999999
Q ss_pred CCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCcccc------cc----cccCCC
Q 044173 311 PLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPFMYH------LD----RLFDPF 380 (455)
Q Consensus 311 ~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~------~~----~~~~~~ 380 (455)
|+|++||||++..+.+..+.+|+.+.+|+.+|..||+++++++++++++.++.+...++... ++ ...+..
T Consensus 298 plp~~Y~GN~v~~~~~~~~~~el~~~~l~~~a~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (447)
T PLN03157 298 PLPDGYFGNATLDVIAESTSGELVSKPLGYASSKIREAIEKVTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNP 377 (447)
T ss_pred CCCCCcccceeeeccchhhHHHHhhCCHHHHHHHHHHHHHHhHHHHHHHHHHHHhhCccchhhhcccccccccccccCCC
Confidence 99999999999999888889999999999999999999999999999998865543333111 11 112345
Q ss_pred eEEEecCCCCcccCCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhc
Q 044173 381 SIMMGSSPRFNKYGNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEA 445 (455)
Q Consensus 381 ~~~~ssw~~~~~~~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~ 445 (455)
++.+|||.++++|++|||||+|.++++... ..+|.++++|++.++|||+|.|+|++++|++|++
T Consensus 378 ~~~vssw~~~~~y~~DFGwGkp~~~~p~~~-~~~g~~~l~~~~~~~g~iev~v~L~~~~M~~f~~ 441 (447)
T PLN03157 378 NLGVVSWLTLPIYGLDFGWGKEIYMGPGTH-DFDGDSLLLPGQNEDGSVILALCLQVAHMEAFKK 441 (447)
T ss_pred ceEEeecccCCccccccCCCccceeccccc-CCCceEEEeecCCCCCcEEEEEEcCHHHHHHHHH
Confidence 799999999999999999999999876432 3679999999988888999999999999999985
No 2
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=100.00 E-value=3e-73 Score=577.57 Aligned_cols=415 Identities=28% Similarity=0.432 Sum_probs=335.5
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhc
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFY 83 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (455)
|.|+|+++++|+|+.|++ .+.++||.+|+.++. .|++.++||+.+.+ . ...+ .++||+||+++|++||
T Consensus 1 ~~v~~~~~~~V~Ps~ptp--~~~~~LS~lD~~~~~-~~~~~v~fY~~~~~---~----~~~~--~~~Lk~sLs~~L~~~y 68 (431)
T PLN02663 1 MIINVRESTMVRPAEETP--RRGLWNSNVDLVVPR-FHTPSVYFYRPTGA---S----NFFD--PQVMKEALSKALVPFY 68 (431)
T ss_pred CeEEEcCcEEECCCCCCC--CCcccCChhhccccc-ccccEEEEEcCCCC---C----CccC--HHHHHHHHHHHHhhcc
Confidence 579999999999999986 368999999998876 69999999986542 0 1122 5899999999999999
Q ss_pred CCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCc-ccccccCCCCCCCCCCCCCCeEEEEEEE
Q 044173 84 PLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPL-VVQSFFDHDRALNHDGHSRPLLSIQVTE 162 (455)
Q Consensus 84 ~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~~~~~~~~~p~l~vqvt~ 162 (455)
+|||||+.+++ | +++|+| +++||.|++++++.+++|+.... |. .+++++|..+.. ....+.|++.+|||+
T Consensus 69 plaGRl~~~~~----g-~~~i~c-~~~Gv~fv~A~~~~~l~~~~~~~--~~~~~~~l~P~~~~~-~~~~~~P~l~vQvt~ 139 (431)
T PLN02663 69 PMAGRLRRDED----G-RIEIDC-NAEGVLFVEADTPSVIDDFGDFA--PTLELRQLIPTVDYS-GGISSYPLLVLQVTH 139 (431)
T ss_pred ccceeeeECCC----C-CEEEEE-CCCCceEEEEecCCCHHHhhccC--CCHHHHhhcCCCCCc-cccccCceEEEEEEE
Confidence 99999998765 6 899999 99999999999999999986421 32 344566653211 112457999999999
Q ss_pred e-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc-ccCCCCcccc--cc----c
Q 044173 163 L-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRWFPDGRDPII-NLPFTHRDEF--IR----R 234 (455)
Q Consensus 163 ~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~~~~~~~~~~-~~p~~~~~~~--~~----~ 234 (455)
| |||++||+++||.++||.|+.+|+++||++|| |. +...+|+++|.++..++++. ..++..+... .. .
T Consensus 140 F~cGG~~lg~~~~H~v~Dg~g~~~fl~awa~~~r--g~--~~~~~p~~dr~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (431)
T PLN02663 140 FKCGGVSLGVGMQHHAADGFSGLHFINTWSDMAR--GL--DLTIPPFIDRTLLRARDPPQPAFHHVEYQPPPSMKTPLET 215 (431)
T ss_pred eccCCEEEEEEecccccchHHHHHHHHHHHHHhc--CC--CCCCCCccCccccCCCCCCCCCcccccccCCCcccccccc
Confidence 9 79999999999999999999999999999999 72 34567899998765554432 1111111100 00 0
Q ss_pred CCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCC
Q 044173 235 YEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPR 314 (455)
Q Consensus 235 ~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~ 314 (455)
..+++.+.++|+|++++|++||+++.+. .+..++|++|+|+||+|+|++|||+.+++..+.+.++||+|+|++|++|+
T Consensus 216 ~~~~~~~~~~f~fs~~~i~~LK~~~~~~--~~~~~~S~~dalsA~lW~~~~rA~~~~~~~~~~~~~~vd~R~rl~p~lp~ 293 (431)
T PLN02663 216 SKPENTTVSIFKLTRDQLNTLKAKSKED--GNTISYSSYEMLAGHVWRSACKARGLPDDQETKLYIATDGRSRLRPQLPP 293 (431)
T ss_pred CCCCCceEEEEEECHHHHHHHHhhCccc--CCCcccchHHHHHHHHHhhhhhcccCCCccceEEEEEecCCcCCCCCCCC
Confidence 1134567899999999999999998753 23357899999999999999999987778899999999999999999999
Q ss_pred CCcccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCccccc--c-cccCCCeEEEecCCCCc
Q 044173 315 EYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPFMYHL--D-RLFDPFSIMMGSSPRFN 391 (455)
Q Consensus 315 ~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ssw~~~~ 391 (455)
+||||++..+.+..+++|+.+.+|..+|..||+++++++++|+++.++.+...++...+ + ..+.+.++.+|||.+|+
T Consensus 294 ~Y~GN~~~~~~~~~~~~el~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~ 373 (431)
T PLN02663 294 GYFGNVIFTATPIAVAGELQSKPTWYAAGKIHDALVRMDDDYLRSALDYLELQPDLSALVRGAHTFRCPNLGITSWVRLP 373 (431)
T ss_pred CcccceEEecccccchhhhhhCCHHHHHHHHHHHHHHhCHHHHHHHHHHHHhCcccchhhcccCcCcCCcEEecccCCCC
Confidence 99999999999999999999999999999999999999999999988655444333222 1 11335579999999999
Q ss_pred ccCCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcC
Q 044173 392 KYGNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEAD 446 (455)
Q Consensus 392 ~~~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d 446 (455)
+|++|||||+|.++++.. ...+|.++++|++.++|||+|.|+|++++|++|++.
T Consensus 374 ~y~~DFGwGkP~~v~~~~-~~~~g~~~~~p~~~~~g~iev~v~L~~~~m~~f~~~ 427 (431)
T PLN02663 374 IYDADFGWGRPIFMGPGG-IAYEGLSFILPSPTNDGSLSVAISLQSEHMKLFEKF 427 (431)
T ss_pred ccccccCCCccccccccc-ccCCCeEEEeccCCCCCcEEEEEECCHHHHHHHHHH
Confidence 999999999999997653 235799999999887788999999999999999853
No 3
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=100.00 E-value=4.5e-73 Score=576.38 Aligned_cols=421 Identities=20% Similarity=0.246 Sum_probs=327.5
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhc
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFY 83 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (455)
|.|+++++++|+|+.|++.+-+.++||.+|+.++. .|++.++||+.+.+. . .+.++++++||+||+++|++||
T Consensus 1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~-~~~~~~~fY~~~~~~--~----~~~~~~~~~Lk~sLs~~L~~fy 73 (444)
T PLN00140 1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPT-TYIPMIFFYPTNNNQ--N----FKGLQISIQLKRSLSETLSTFY 73 (444)
T ss_pred CeeEEeccceeccCCCCccccccCCCChHHhcccc-cccceEEEeeCCCcc--c----ccchhHHHHHHHHHHHHHhhhh
Confidence 57999999999999998754568999999998765 699999999876420 0 1124678999999999999999
Q ss_pred CCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCC-CCCCCCCCeEEEEEEE
Q 044173 84 PLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRAL-NHDGHSRPLLSIQVTE 162 (455)
Q Consensus 84 ~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~-~~~~~~~p~l~vqvt~ 162 (455)
+|||||+. +++|+| |++||.|+||+++.+++|+... ..+..+++|+|..+.. .......|++.||||+
T Consensus 74 plAGRl~~---------~~~i~c-n~~Gv~fveA~~~~~l~d~l~~-~~~~~~~~l~p~~~~~~~~~~~~~Pll~vQvT~ 142 (444)
T PLN00140 74 PFSGRVKD---------NLIIDN-YEEGVPFFETRVKGSLSDFLKH-PQLELLNKFLPCQPFSYESDPEAIPQVAIQVNT 142 (444)
T ss_pred ccCccccC---------CceeEc-cCCCceEEEEEecCcHHHhcCC-CCHHHHHhhCCCCcccccCCccCCceEEEEEEE
Confidence 99999983 468999 9999999999999999998542 1223456777754321 1122347999999999
Q ss_pred e-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCcc--CCCCCCCCcccCCCCccccc-ccCCCC
Q 044173 163 L-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRW--FPDGRDPIINLPFTHRDEFI-RRYEAP 238 (455)
Q Consensus 163 ~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~--~~~~~~~~~~~p~~~~~~~~-~~~~~~ 238 (455)
| |||++||+++||.++||.|+.+|+++||++|| | .......|.++|. ..+.+++ .+........ ......
T Consensus 143 F~cGG~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~r--g-~~~~~~~P~~dr~~~~~p~~~~---~~~~~~~~~~~~~~~~~ 216 (444)
T PLN00140 143 FDCGGIALGLCFSHKIIDAATASAFLDSWAANTR--G-HYSEVINPDLFEASSFFPPLNS---FPVQFLLLMEENWFFKE 216 (444)
T ss_pred eccCcEEEEeeeceEcccHHHHHHHHHHHHHHhc--C-CCCCCCCcccccccccCCCCCc---ccccccccccccccccC
Confidence 9 89999999999999999999999999999999 7 2333457888884 1111111 1100000000 011235
Q ss_pred CceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCC--CCCCceEEEEeecCCCCCCCCCCCCC
Q 044173 239 QLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNL--PPDQTTSCRMAADNRPRLEPPLPREY 316 (455)
Q Consensus 239 ~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~--~~~~~~~~~~~vd~R~rl~p~lp~~Y 316 (455)
+++.++|+|++++|++||+++... ...++|++|+|+|++|+|++||++. +.+..+.+.++||+|+|++||+|++|
T Consensus 217 ~~v~~~f~fs~~~I~~LK~~~~~~---~~~~~S~~e~vsA~iWr~~~rA~~~~~~~~~~~~~~~~vn~R~Rl~PpLP~~y 293 (444)
T PLN00140 217 NYITKRFVFDAKAIATLRAKAKSK---RVPNPSRIETLSCFIWKCCTAASRSISAAPRPSISVHAVNIRQRTKPPMSRYS 293 (444)
T ss_pred ceEEEEEEECHHHHHHHHHhcccc---cCCCCchhHHHHHHHHHHHHHHhhhccCCCCceEEEEEEeccccCCCCCCccc
Confidence 678999999999999999998754 2347999999999999999999643 23567899999999999999999999
Q ss_pred cccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCc---cc-cc-cccc-CCCeEEEecCCCC
Q 044173 317 FGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPF---MY-HL-DRLF-DPFSIMMGSSPRF 390 (455)
Q Consensus 317 ~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~---~~-~~-~~~~-~~~~~~~ssw~~~ 390 (455)
|||++..+.+..+.+|+ ..+|.++|..||+++++++++|+++.++... ... .. .. +... .+..+.+|||++|
T Consensus 294 ~GN~i~~~~~~~~~~~~-~~~l~~~a~~Ir~~i~~~~~e~~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vssw~r~ 371 (444)
T PLN00140 294 IGNLFWWALAAADPADT-KIELNELVSLTRESIANYNSDYLKSLQGENG-LEGMSEYLNQLVGIFSEEPEIFLFSSWLNF 371 (444)
T ss_pred ccchhhhheeccccccc-ccchHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHhhcccCCCceEEecccccC
Confidence 99999999988888886 5899999999999999999999998764211 000 00 00 0001 1234589999999
Q ss_pred cccCCCCCCCceeEEeeCCC--CCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcCcchhhhcc
Q 044173 391 NKYGNEFGLGQAVALRSGYA--HKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEADEEFMEVTS 454 (455)
Q Consensus 391 ~~~~~DFG~G~P~~v~~~~~--~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d~~~~~~~~ 454 (455)
++|++|||||+|++++++.. ...+|.++++|.+++ ||+||.++|++++|++|++|+||++|++
T Consensus 372 ~~ye~DFGwGkP~~v~~~~~~~~~~~~~~~l~~~~~~-~giev~v~L~~~~M~~f~~d~e~l~~~~ 436 (444)
T PLN00140 372 GLNDVDFGWGKPIWVGLLGEVGPAFRNLTVFKETGDN-NGIEAWITLDEKIMAILERDPEFLAFAT 436 (444)
T ss_pred CccccccCCCCceeeecccccCCcccceEEEEecCCC-CeEEEEEecCHHHHHHHhhCHHHHhhcC
Confidence 99999999999999987531 134688999998754 8999999999999999999999999975
No 4
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=100.00 E-value=1.3e-72 Score=572.69 Aligned_cols=411 Identities=27% Similarity=0.399 Sum_probs=334.0
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhc
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFY 83 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (455)
..|++.++++|+|+.|++ .+.++||.+|+.++ .|++.++||+.++. . ..++++++||+||+++|++||
T Consensus 12 ~~v~~~~~~~V~Ps~ptp--~~~~~LS~lD~~~~--~~~~~~~fy~~~~~---~-----~~~~~~~~Lk~sLs~~L~~~~ 79 (436)
T PLN02481 12 LVVKQKEPELVPPAEETP--KGLYFLSNLDQNIA--VIVRTVYCFKSEER---G-----SNEDPVDVIKKALSKVLVHYY 79 (436)
T ss_pred eEEEEcCCEEeCCCCCCC--CCceecCccccCcc--eeeeEEEEECCCCc---c-----cccCHHHHHHHHHHHHhcccc
Confidence 569999999999999986 47999999999764 48999999987653 1 123468999999999999999
Q ss_pred CCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCC--cccccccCCCCCCCCCCCCCCeEEEEEE
Q 044173 84 PLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVP--LVVQSFFDHDRALNHDGHSRPLLSIQVT 161 (455)
Q Consensus 84 ~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p--~~~~~l~p~~~~~~~~~~~~p~l~vqvt 161 (455)
+|||||+.+++ | +++|+| +++||.|+++.++.+++++.... .| ..++.|+|..+. .......|++.+|||
T Consensus 80 plAGRL~~~~~----g-~~~i~c-~~~Gv~fvea~~d~~l~~l~~~~-~p~~~~~~~l~~~~~~-~~~~~~~Pll~vQvT 151 (436)
T PLN02481 80 PLAGRLTISSE----G-KLIVDC-TGEGVVFVEAEANCSIEEIGDIT-KPDPETLGKLVYDVPG-AKNILEIPPLTAQVT 151 (436)
T ss_pred CCCCeeeeCCC----C-cEEEEE-cCCCeEEEEEEecCcHHHhcccc-CCCCHHHHHhCCCCCC-cccccccceeeeccc
Confidence 99999998765 6 899999 99999999999999999985432 23 234556543321 111234799999999
Q ss_pred Ee-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc-ccCCCCcccc--cc----
Q 044173 162 EL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRWFPDGRDPII-NLPFTHRDEF--IR---- 233 (455)
Q Consensus 162 ~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~~~~~~~~~~-~~p~~~~~~~--~~---- 233 (455)
.| |||++||+++||.++||.|+.+|+++||++|| | .+...+|+++|..+..++++. ..+..++... ..
T Consensus 152 ~F~~GG~~lg~~~~H~v~Dg~g~~~fl~~WA~~~r--g--~~~~~~p~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~ 227 (436)
T PLN02481 152 RFKCGGFVLGLCMNHCMFDGIGAMEFVNSWGETAR--G--LPLSVPPFLDRSILRARNPPKIEFPHQEFAEIEDVSGTSK 227 (436)
T ss_pred eEecCcEEEEEEeccccccHHHHHHHHHHHHHHhc--C--CCCCCCCCcCcccCCCCCCCCCCcCccccccccCCccccc
Confidence 99 89999999999999999999999999999999 7 234567889987665554432 2222111110 00
Q ss_pred cCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCC
Q 044173 234 RYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLP 313 (455)
Q Consensus 234 ~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp 313 (455)
.....+++.++|+|++++|++||+++..+ ....++|++|+|+||+|+|++||++..++..+.+.++||+|+|++||+|
T Consensus 228 ~~~~~~~~~~~f~fs~~~i~~LK~~a~~~--~~~~~~S~~dal~A~iW~~~~rA~~~~~~~~~~l~~~vd~R~rl~Pplp 305 (436)
T PLN02481 228 LYDDEELVYKSFCFDPEKLEKLKSMALED--GVIKKCSTFEALTAFVWRARTKALKMLPDQQTKLLFAVDGRSRFNPPLP 305 (436)
T ss_pred cccccCceEEEEEECHHHHHHHHHhcccc--cCCCCcChHHHHHHHHHHHHHhccCCCCCCeEEEEEEEcCccCCCCCCC
Confidence 01235678999999999999999998754 2235799999999999999999998777888999999999999999999
Q ss_pred CCCcccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCcccccccccCCCeEEEecCCCCccc
Q 044173 314 REYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPFMYHLDRLFDPFSIMMGSSPRFNKY 393 (455)
Q Consensus 314 ~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~ 393 (455)
.+||||++..+.+.++++++.+.+|+++|..||+++++++++++++.++.+...++... .+.++.+|||.++++|
T Consensus 306 ~~Y~GN~v~~~~~~~~~~~l~~~~l~~~A~~Ir~~i~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~vssw~~~~~y 380 (436)
T PLN02481 306 KGYFGNGIVLTNALTTAGELLENPLSHAVGLVQDAIKMVNDGYMRSAIDYFEVTRARPS-----LASTLLITTWSRLSFH 380 (436)
T ss_pred CCceeeeeeeccccccHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC-----CCCcEEEEecCCCCcc
Confidence 99999999999999999999999999999999999999999999998865543333221 2457999999999999
Q ss_pred CCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcC
Q 044173 394 GNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEAD 446 (455)
Q Consensus 394 ~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d 446 (455)
++|||||+|+++.+.. ...+|.++++|...++|||+|.++|++++|++|+++
T Consensus 381 ~~DFG~G~P~~~~p~~-~~~~~~~~~~~~~~~~~gi~v~v~L~~~~M~~f~~~ 432 (436)
T PLN02481 381 TTDFGWGEPVLSGPVG-LPEKEVILFLSHGKERKSINVLLGLPASAMKTFQEL 432 (436)
T ss_pred cccccCCccccccccc-cCCCceEEEeccCCCCCcEEEEEECCHHHHHHHHHH
Confidence 9999999999986543 224789999998766789999999999999999874
No 5
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=100.00 E-value=7.1e-73 Score=577.05 Aligned_cols=420 Identities=32% Similarity=0.517 Sum_probs=306.5
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccc-cccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhh
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWD-LVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHF 82 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD-~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~ 82 (455)
|+|+|.++++|+|+.+++. ..++||++| +.++. .|++.+|||+.+.+ . ....+++.||+||+++|++|
T Consensus 1 m~v~v~~~~~V~Ps~~tp~--~~~~LS~lD~~~~~~-~~~~~~~~y~~~~~---~-----~~~~~~~~Lk~sLs~~L~~~ 69 (432)
T PF02458_consen 1 MKVTVLSRSLVKPSSPTPP--HTLPLSNLDLQLMPP-YYVPVLLFYRPPSS---S-----DDSDIVDNLKESLSKTLVHY 69 (432)
T ss_dssp ---EEEEECEEE-STTS-T--CEEE--HHHHHCCGC-SEEEEEEEEE--SS---C-----HHHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEecCEEEECCCCCCC--CcccCchhhcCcccc-cEEEEEEEecCccc---c-----ccchHHHHHHHHHHHhHhhC
Confidence 6899999999999999874 499999999 66654 58888999998764 1 23346999999999999999
Q ss_pred cCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCc-ccccccCCCCCCCCCCCCCCeEEEEEE
Q 044173 83 YPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPL-VVQSFFDHDRALNHDGHSRPLLSIQVT 161 (455)
Q Consensus 83 p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~~~~~~~~~p~l~vqvt 161 (455)
|+||||| .+++ | +++|+| +++||.|++++++.+++|+.... .+. ....|.|..+. .....+.|++.||||
T Consensus 70 ~~lAGrl-~~~~----~-~~~i~c-~d~Gv~f~~a~~~~~l~~~~~~~-~~~~~~~~l~p~~~~-~~~~~~~Pll~vQvt 140 (432)
T PF02458_consen 70 YPLAGRL-RDPD----G-RLEIDC-NDDGVEFVEAEADGTLDDLLDLE-PPSEFLRDLVPQLPV-SSEGEDAPLLAVQVT 140 (432)
T ss_dssp GGGGSEE-ESSC----T-TTEEEE-CTTTEEEEEEEESS-HHHHCSSS-CCGGGGGGGSSS-SS-SEEETTEBSEEEEEE
T ss_pred cccCcEE-cccc----c-ceEEEE-ecCCCEEEEEecccceeeccccc-cchHHHHHHhhhccc-CCcccccceeEeeee
Confidence 9999999 6653 5 789999 99999999999999999998654 232 33556664332 122245899999999
Q ss_pred Ee-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc-ccCCCCcccccc--cCCC
Q 044173 162 EL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRWFPDGRDPII-NLPFTHRDEFIR--RYEA 237 (455)
Q Consensus 162 ~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~~~~~~~~~~-~~p~~~~~~~~~--~~~~ 237 (455)
+| |||++||+++||.++||.|+..|+++||++|| | .......|.++|..+...++|. ......+..... ....
T Consensus 141 ~f~~GG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r--g-~~~~~~~p~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 217 (432)
T PF02458_consen 141 RFKCGGLALGVSFHHAVADGTGFSQFLKAWAEICR--G-GSPPSPPPVFDRSLLLPPNPPSVSFPPSEFEPFPPEPAPPS 217 (432)
T ss_dssp EETTTEEEEEEEEETTT--HHHHHHHHHHHHHHHH--T-TCHHHHHHCHSSTTSS-STTHHHGCTCSCHTTC--TTS---
T ss_pred eecccceeeeeeceeccCcccchhHHHHHHHhhhc--C-CcccccccccchHHhhhccCccccccccccccccccccccc
Confidence 99 79999999999999999999999999999999 6 2233345777776554433222 111111111111 1134
Q ss_pred CCceeEEEEeC---HHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCC
Q 044173 238 PQLLERIFHFT---GESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPR 314 (455)
Q Consensus 238 ~~~~~~~f~~~---~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~ 314 (455)
.+...+.|.|+ .++|++||.++.... .....|++|+|+||+|+|+++||....+..+.+.++||+|+|++|++|+
T Consensus 218 ~~~~~~~~~f~~~~~~~l~~lk~~~~~~~--~~~~~St~d~l~A~lWr~~~rar~~~~~~~~~l~~~vd~R~rl~pplp~ 295 (432)
T PF02458_consen 218 SKCVSKTFVFSKLSIEKLKKLKSEALSSS--SGKPVSTFDALTALLWRCITRARGLPSDETSRLSFAVDCRKRLNPPLPE 295 (432)
T ss_dssp SSEEEEEEEEEHHHHHHHHHHHHHHSTTT--STT-S-HHHHHHHHHHHHHHHHHCHTTTTCEEEEEEEETHHHSSS---T
T ss_pred cccccceeeecccHHHHHHHHhhcccccc--CCCCCCeeEEEEEehhhhhccccccccccccccccccccCCCcCCCcce
Confidence 56678888888 666666666665541 2222399999999999999999987666779999999999999999999
Q ss_pred CCcccccccccceeeccccccCcHHHHHHHHHHHHHh-cChHHHHHHHHHHhcCCc--ccccccccCCCeEEEecCCCCc
Q 044173 315 EYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN-QTDKAVREWLDAWWKSPF--MYHLDRLFDPFSIMMGSSPRFN 391 (455)
Q Consensus 315 ~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~-~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~ssw~~~~ 391 (455)
+||||++..+.+..+++|+.+.+|+.+|..||+++++ ++++++++.++....... ...... ..+.++.+|||.+++
T Consensus 296 ~Y~GN~~~~~~~~~~~~el~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ssw~~~~ 374 (432)
T PF02458_consen 296 GYFGNAVFFAFASATAGELLSEPLSDIARLIREAIAKMVTEEYVRSAIDWVESQSSRKLIPSFF-PGGPDVVVSSWRRFP 374 (432)
T ss_dssp TB-S--EEEEEEEEEHHHHHHSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC-CCCHTCCTST-CG-CEEEEEEETTSS
T ss_pred eecCceEeecccccchhhhhhhhhhHHHHhhhhhhhccchHHHhhhhhcccccccccccccccc-CcCCceeccccccCC
Confidence 9999999999999999999999999999999999998 789999998755444222 111111 122689999999999
Q ss_pred ccCCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcCcchh
Q 044173 392 KYGNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEADEEFM 450 (455)
Q Consensus 392 ~~~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d~~~~ 450 (455)
+|++|||||+|++++.+... ..+.++++|.+.++||+||.|+|++++|++|++|++|+
T Consensus 375 ~y~~DFG~G~P~~~~~~~~~-~~~~~~~~p~~~~~ggvev~v~L~~~~M~~f~~d~e~~ 432 (432)
T PF02458_consen 375 FYEVDFGWGKPVAVRPPSPP-RGGGVFLLPSRGGDGGVEVWVCLPEEAMERFEKDFEFL 432 (432)
T ss_dssp GGG--TSSSS-SEEEECGCC-STTEEEEEE-SSTTSSEEEEEEEEHHHHHHHHHHHH--
T ss_pred CcccccCCCCceEEEccccc-CCCEEEEEccCCCcCcEEEEEECCHHHHhChhhcccCC
Confidence 99999999999999987543 56778999999777999999999999999999999986
No 6
>PRK09294 acyltransferase PapA5; Provisional
Probab=99.46 E-value=6.1e-11 Score=120.48 Aligned_cols=314 Identities=14% Similarity=0.129 Sum_probs=184.5
Q ss_pred cceeCCccccccccc-cccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEE
Q 044173 25 QPCYLTPWDLVMLSV-QYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVF 103 (455)
Q Consensus 25 ~~~~Ls~lD~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~ 103 (455)
-..+|++....++.. .|+. +.+..... ++ .+.|++||.+++..+|.|..++....+ | .++
T Consensus 6 ~~~~L~~~~~~f~~~~~~~~--~~~~l~g~----------lD--~~~L~~Al~~l~~rhp~Lr~~~~~~~~----~-~~~ 66 (416)
T PRK09294 6 VIRKLAPSEEVFARYEAFTG--YTAHLRGV----------LD--IDALSDAFDALLRAHPVLAAHLEQDSD----G-GWE 66 (416)
T ss_pred cccCCchHHhhhhccCceEE--EEEEEcCC----------CC--HHHHHHHHHHHHHhCHHhhEEEEECCC----C-ceE
Confidence 345666666665442 2333 34444432 23 889999999999999999999965433 3 333
Q ss_pred EEecCC--CCceEEEEecccchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEeeCeEEEEeecccccccch
Q 044173 104 VDCNNS--PGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELVDGIFIGCSMNHVLGDGT 181 (455)
Q Consensus 104 i~~~~~--~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~gG~~lg~~~~H~v~Dg~ 181 (455)
+...+. ..+.+... +.. . + .-+. +.. .+.+++.+.+..-+++..|.+.+||.++||.
T Consensus 67 ~~~~~~~~~~v~~~d~------~~~---~--~-----~~~~----~l~-~~~~l~~~~~~~~~~~~~l~l~~hH~i~DG~ 125 (416)
T PRK09294 67 LVADDLLHPGIVVVDG------DAA---R--P-----LPEL----QLD-QGVSLLALDVVPDDGGARVTLYIHHSIADAH 125 (416)
T ss_pred EeeCCcCCCCeEEEec------ccc---c--c-----cCCC----CCC-CCCceEEEEEEEcCCCEEEEEEeccEeEccc
Confidence 333111 12222111 000 0 0 0000 111 1234666665433578899999999999999
Q ss_pred hHHHHHHHHHHHHHhc---CCCCCCCCCCC---CC-----ccCCCC-CCC-Cc--------ccCCCCccccc-ccCCCCC
Q 044173 182 SFWNFFNAFSEIFQAQ---GKMDSISRPPV---VK-----RWFPDG-RDP-II--------NLPFTHRDEFI-RRYEAPQ 239 (455)
Q Consensus 182 g~~~fl~~wa~~~r~~---G~~~~~~~~P~---~d-----r~~~~~-~~~-~~--------~~p~~~~~~~~-~~~~~~~ 239 (455)
|+..|++.+.+.+... |...+....|. ++ +..... .+. .. .+|........ ....+..
T Consensus 126 S~~~ll~el~~~Y~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ 205 (416)
T PRK09294 126 HSASLLDELWSRYTDVVTTGDPGPIRPQPAPQSLEAVLAQRGIRRQALSGAERFMPAMYAYELPPTPTAAVLAKPGLPQA 205 (416)
T ss_pred cHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCHHHHHHhcCCCcccccchhhhhhhhccccCCCCCcCcCCCCCCCCCC
Confidence 9999999999998742 21111111111 11 000000 000 00 00100000000 0001122
Q ss_pred ceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCccc
Q 044173 240 LLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGN 319 (455)
Q Consensus 240 ~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN 319 (455)
.....+.|+++..++|++.|.+. .+|.+++|.|.+|.++.+..+.+ +....+.++||.|++++|+++..+++|
T Consensus 206 ~~~~~~~l~~~~~~~L~~~a~~~------~~t~~~~l~Aa~~~~l~r~~~~~-~~~i~~~~pv~~R~~l~p~~~~~~~~n 278 (416)
T PRK09294 206 VPVTRCRLSKAQTSSLAAFGRRH------RLTVNALVSAAILLAEWQLRRTP-HVPLPYVYPVDLRFRLTPPVAATEGTN 278 (416)
T ss_pred CceeEEEeCHHHHHHHHHHHHHc------CCcHHHHHHHHHHHHHHHhcCCC-CCceeeecchhhHhhcCCCCCccccee
Confidence 34566899999999999999876 58999999999999998886643 445667899999999998898889999
Q ss_pred ccccccceeeccccccCcHHHHHHHHHHHHHh-cChHHHHHHHHHHhcCCccccccccc-CCCeEEEecCCCCc
Q 044173 320 SINPLRGVTTVGELLGHDLGWAAWKLHQTVVN-QTDKAVREWLDAWWKSPFMYHLDRLF-DPFSIMMGSSPRFN 391 (455)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~-~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~ssw~~~~ 391 (455)
++........++ .+.++.++|+.+++.+++ ++.+++...+.... ... .+... .+..+.+|||.+++
T Consensus 279 ~~g~~~~~~~~~--~~~sf~ela~~v~~~~~~~l~~~~v~~~~~~~~---~~~-~~~~~~~~~~v~~Snlg~~~ 346 (416)
T PRK09294 279 LLGAATYLAEIG--PDTDIVDLARAIAATLRADLADGVIQQSFLHFG---TAF-EGTPPGLPPVVFITNLGVAP 346 (416)
T ss_pred eEeeeeeecccc--CCCCHHHHHHHHHHHHhhhhhcceeeehhhccc---ccc-cCCCCCCCCeEEEecCCcCC
Confidence 998766555443 246899999999999974 45555432221110 000 01100 13468999999994
No 7
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=98.88 E-value=7.4e-07 Score=92.38 Aligned_cols=193 Identities=13% Similarity=0.088 Sum_probs=115.0
Q ss_pred CCeEEEEEEEee---CeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCC---CCCC--CCCCc----cCCCCCCC-
Q 044173 153 RPLLSIQVTELV---DGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDS---ISRP--PVVKR----WFPDGRDP- 219 (455)
Q Consensus 153 ~p~l~vqvt~~~---gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~---~~~~--P~~dr----~~~~~~~~- 219 (455)
.|+-++-|-.-. +..-|.+.+||+++||.+...|.+.+-+.+........ .... +..+. .++...+.
T Consensus 124 ~P~Wrl~vl~~~~~~~~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~~~~~~~~~~~~~i~~~~~~~~~~~~LP~p~~~~ 203 (480)
T PF07247_consen 124 KPLWRLIVLPNEDDESFQFIVFVFHHAIFDGMSGKIFHEDLLEALNSLSSDPEPDDNDVIFDPSSDVEHLPSLPPPIEEL 203 (480)
T ss_pred CCCeEEEEECCCCCCcceEEEEEecccccccHHHHHHHHHHHHHHhhccccccccccCceecCCcccccccCCCcCHHHh
Confidence 477664443332 24688999999999999999999999988874200001 0000 00000 11111000
Q ss_pred ----Cc--c-------------cCCCCc--cccc-c--cC-CCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHH
Q 044173 220 ----II--N-------------LPFTHR--DEFI-R--RY-EAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQ 274 (455)
Q Consensus 220 ----~~--~-------------~p~~~~--~~~~-~--~~-~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d 274 (455)
+. . .....+ .... . +. .+.+...+.++|+++++++|++.|+++ .+|-.-
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~i~~~~~~~ll~~CR~~------~~TlT~ 277 (480)
T PF07247_consen 204 IKSSPSLYFLPKSLWSSFIFPSLFFSKWSDKPIFATIPPIPKPFKTRYRSLSISPEELKKLLKACRKH------GTTLTA 277 (480)
T ss_pred hhccccHHHHHHHHHHHhhhhhccccccccCCccCCCCccccCCcceEEEEEECHHHHHHHHHHHHHc------CCCHHH
Confidence 00 0 000000 0000 0 00 122345789999999999999999987 578888
Q ss_pred HHHHHHHHHHHhhcC---CCCCCceEEEEeecCCCCCCCCCC---CCCcccccccccc-----eeeccccccCcHHHHHH
Q 044173 275 ALSALVWRSITRTRN---LPPDQTTSCRMAADNRPRLEPPLP---REYFGNSINPLRG-----VTTVGELLGHDLGWAAW 343 (455)
Q Consensus 275 ~l~A~lW~~i~~ar~---~~~~~~~~~~~~vd~R~rl~p~lp---~~Y~GN~~~~~~~-----~~~~~~l~~~~L~~~A~ 343 (455)
.|.|++-.++.+... ........+.+++|+|+.+..... ..-+|+.+..... ......-....+.++|+
T Consensus 278 ~L~al~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~~p~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~fW~~a~ 357 (480)
T PF07247_consen 278 LLHALIALALSKVQLPKPKSEKSSFKISTPVNLRRFLPEDSELRDEYSYGNFVGGIDFSYSISPVSASRGSSENFWELAR 357 (480)
T ss_pred HHHHHHHHHHHhhhcccccccCceEEEEeeeeCCCCCCccccccccccceeEEEccceeeecccccccccchHHHHHHHH
Confidence 999999888887421 122345688899999999954444 4567887765322 11111111346899999
Q ss_pred HHHHHHHh
Q 044173 344 KLHQTVVN 351 (455)
Q Consensus 344 ~iR~ai~~ 351 (455)
.+++.+.+
T Consensus 358 ~~~~~i~~ 365 (480)
T PF07247_consen 358 QIQKEIKE 365 (480)
T ss_pred HHHHHHHH
Confidence 99998876
No 8
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=98.85 E-value=3.2e-07 Score=88.31 Aligned_cols=276 Identities=15% Similarity=0.158 Sum_probs=166.3
Q ss_pred cccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEE--EEecC-
Q 044173 32 WDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVF--VDCNN- 108 (455)
Q Consensus 32 lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~--i~~~~- 108 (455)
.|..+.. +..+.++.|... ++ ++.|++||..+.+..|.|+-+.......+ .|+ .+. +
T Consensus 18 ~d~~i~~-htl~~vi~f~~~------------fn--i~~lkkAl~~svka~piL~c~f~eg~~~~----~Wq~i~d~-~v 77 (439)
T COG4908 18 DDYKIND-HTLHYVITFGDK------------FN--IDRLKKALRYSVKAVPILSCKFSEGEKRP----FWQRILDF-EV 77 (439)
T ss_pred hhcCcCC-ceEEEEEEeCCc------------cC--HHHHHHHHHHHHHhhhhhhhhhhhcccch----hHHHHhcc-cc
Confidence 4544433 445556666544 33 88999999999999999999987543321 121 111 1
Q ss_pred CC-CceEEEEecccchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEeeCeEEEEeecccccccchhHHHHH
Q 044173 109 SP-GAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELVDGIFIGCSMNHVLGDGTSFWNFF 187 (455)
Q Consensus 109 ~~-gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~gG~~lg~~~~H~v~Dg~g~~~fl 187 (455)
++ -..+.+...|.++.+.. +.+|.-... +. ....|++.+-+++-+-|=.|.+.+||+++||.|+-+.+
T Consensus 78 ~~~~i~l~~t~~~~~~~E~~--------fs~Fi~~k~--~~-t~~~PqI~v~~~r~~~~d~L~i~lhH~~~DgrG~leyL 146 (439)
T COG4908 78 DQIAIHLEETKTDEPFGEVA--------FSRFIVRKL--NI-TKESPQIKVFVVRQTVGDTLVINLHHAVCDGRGFLEYL 146 (439)
T ss_pred cceeEEEeeecccccchhHH--------HHHHHhccc--cc-ccCCCeEEEeeehhccCcEEEEEechhhhcchhHHHHH
Confidence 11 22233333333333321 112221111 11 23479988888888888889999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCC----ccCCCCCCC------------CcccC--CCCcccccccCCCCCceeEEEEeCH
Q 044173 188 NAFSEIFQAQGKMDSISRPPVVK----RWFPDGRDP------------IINLP--FTHRDEFIRRYEAPQLLERIFHFTG 249 (455)
Q Consensus 188 ~~wa~~~r~~G~~~~~~~~P~~d----r~~~~~~~~------------~~~~p--~~~~~~~~~~~~~~~~~~~~f~~~~ 249 (455)
...++++... ...+...|... |.....++. +...+ .....++..+...+.+.-..+.|+.
T Consensus 147 ~ll~~~Ys~L--~~~~~~~p~~~~~g~k~i~~v~d~f~~~~~~r~~ik~~~e~n~i~~~fP~~~s~d~~~m~~~~~~I~~ 224 (439)
T COG4908 147 YLLARLYSKL--LDNPNYQPNEESKGSKDIFGVRDLFDVLERKRGLIKNLIERNRITRVFPLGGSPDGPNMSFEKTTIPS 224 (439)
T ss_pred HHHHHHHHhc--ccCCCCCcchhhccccchhhhhhhhhHHHHHHHhhhhhhccCCCCccCCCcCCCCCCcceEEEEecCH
Confidence 9999999732 11222223211 000000000 00000 0000111112234566778899999
Q ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHH--HhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccce
Q 044173 250 ESIARLKAKANAEAGNNTNKISSFQALSALVWRSI--TRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGV 327 (455)
Q Consensus 250 ~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i--~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~ 327 (455)
++++.+|.-+..+ ..|.||++-|.+.+-. ..--...........++||+|+.+. --+..+||........
T Consensus 225 ~ef~~ikay~k~~------gaTiNDiilaa~~~fr~~y~~~~~k~~~~lsi~~~VDlRkyl~--sk~~sI~Nls~~~~i~ 296 (439)
T COG4908 225 DEFKKIKAYAKVH------GATINDIILAALLKFRLLYNTTHEKANNYLSIDMPVDLRKYLP--SKEESISNLSSYLTIV 296 (439)
T ss_pred HHHHHHHHhhhhc------CCcHHHHHHHHHHHHHHHHhhhchhhcCeeeeceeeehhhhcc--ccccceeccceeEEEE
Confidence 9999999888765 5799999999873322 2111112235678899999999984 2247889999888888
Q ss_pred eeccccccCcHHHHHHHHHHHHH
Q 044173 328 TTVGELLGHDLGWAAWKLHQTVV 350 (455)
Q Consensus 328 ~~~~~l~~~~L~~~A~~iR~ai~ 350 (455)
...+|+ .++.++...+....+
T Consensus 297 I~~dd~--~~fe~t~~~vk~~~~ 317 (439)
T COG4908 297 INVDDV--TDFEKTLEKVKGIMN 317 (439)
T ss_pred Eecccc--ccHHHHHHHHHhhcC
Confidence 877766 557777777777666
No 9
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=98.48 E-value=8.1e-06 Score=83.79 Aligned_cols=255 Identities=17% Similarity=0.155 Sum_probs=134.2
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
.+.|++++..++..+|.|.-++....... |...++.. ....+.+.+.. .++..... ...+.++.-.....+
T Consensus 32 ~~~l~~al~~~~~rh~~LR~~~~~~~~~~--~~~~~~~~-~~~~~~~~v~~-----~~~~~~~~-~~~~~~~~~~~~~~p 102 (446)
T TIGR02946 32 FEALRALLESRLPLAPRFRQRLREVPLGL--GHPYWVED-PDFDLDYHVRR-----VALPAPGT-RRELLELVGRLMSTP 102 (446)
T ss_pred HHHHHHHHHHhhccCChhhcccccCCCCC--CCcEEeeC-CCCChHHhhcc-----ccCCCCCC-HHHHHHHHHHHhcCC
Confidence 78999999999999999999998543211 21233332 11111110000 01110000 011111110000011
Q ss_pred CCCCCCCeEEEEEEE-e-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCC---CCC-CccCC-CCC---
Q 044173 148 HDGHSRPLLSIQVTE-L-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRP---PVV-KRWFP-DGR--- 217 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~-~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~---P~~-dr~~~-~~~--- 217 (455)
++.. .|++.+.+.. . .|...+-+.+||.++||.++..+++.+.+... + ..+...+ +-. .+... ...
T Consensus 103 ~dl~-~Pl~r~~li~~~~~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (446)
T TIGR02946 103 LDRS-RPLWEMHLIEGLAGGRFAVLTKVHHALADGVAGLRLLARLLDDDP--D-PPPLPAPPPPPQPSTRGLLSGALSGL 178 (446)
T ss_pred CCCC-CCCeEEEEEeccCCCeEEEEEEeehhhhchHHHHHHHHHHcCCCC--C-CCCCCCCCCCCCCchhhhhhhhhhhh
Confidence 2222 3888888887 6 47799999999999999999999987766543 1 0110000 000 00000 000
Q ss_pred ----------------------------CCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCC
Q 044173 218 ----------------------------DPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNK 269 (455)
Q Consensus 218 ----------------------------~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~ 269 (455)
..+...+.. ... ..........+.+.+....+++||+.+... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~r~~~~~~~~~~~l~~~a~~~------g 249 (446)
T TIGR02946 179 PSALLRRVASTAPGVVRAAGRAVEGVARSARPALPFT--APP-TPLNGPISRKRRFAAQSLPLADVKAVAKAF------G 249 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCC--CCC-CcCCCCCCccceEEeeccCHHHHHHHHHHh------C
Confidence 000000000 000 000111223456777778888888777654 5
Q ss_pred cCHHHHHHHHHHHHHHhh---cCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHH
Q 044173 270 ISSFQALSALVWRSITRT---RNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLH 346 (455)
Q Consensus 270 ~St~d~l~A~lW~~i~~a---r~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR 346 (455)
+|.||++.|.+-..+.+- ++..+....++.++||+|.... ..-.||.+......++.++ ..++..+ ..|+
T Consensus 250 ~T~ndvllaa~~~al~~~~~~~~~~~~~~i~~~~pv~~R~~~~----~~~~~N~~~~~~~~l~~~~--~~~~~~l-~~v~ 322 (446)
T TIGR02946 250 VTINDVVLAAVAGALRRYLEERGELPDDPLVAMVPVSLRPMED----DSEGGNQVSAVLVPLPTGI--ADPVERL-SAIH 322 (446)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEEeeecccccc----CCCCCCEEEEEEecCCCCC--CCHHHHH-HHHH
Confidence 899999999888777653 3323445689999999997642 3456777777666666542 2233232 4555
Q ss_pred HHHHh
Q 044173 347 QTVVN 351 (455)
Q Consensus 347 ~ai~~ 351 (455)
+....
T Consensus 323 ~~~~~ 327 (446)
T TIGR02946 323 ASMTR 327 (446)
T ss_pred HHHHH
Confidence 54443
No 10
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=98.45 E-value=2.9e-06 Score=81.55 Aligned_cols=262 Identities=20% Similarity=0.224 Sum_probs=133.9
Q ss_pred cceeCCcccc-------ccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCC
Q 044173 25 QPCYLTPWDL-------VMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSP 97 (455)
Q Consensus 25 ~~~~Ls~lD~-------~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~ 97 (455)
+.+|||+.-+ ..+........++|..... .+ .++|++|+..++..+|.|-.++...++..
T Consensus 3 ~~~plt~~Q~~~~~~~~~~~~~~~~~~~~~~~l~~~----------~d--~~~l~~A~~~~~~~h~~Lr~~~~~~~~~~- 69 (301)
T PF00668_consen 3 DVYPLTPAQQGIWLLQQLSPDSSSYNIAFVFELDGP----------ID--IERLRQALERLIARHPILRTRFEEDDGFE- 69 (301)
T ss_dssp SCEE--HHHHHHHHHHHHSTTSTTTEEEEEEEEEES--------------HHHHHHHHHHHHHH-GGGGEEEEECTTCS-
T ss_pred CccCCHHHHHHHHHHhccCCCCCcEEEEEEEEecCc----------cc--hHHHhhhhHhhhhhhhhhhheeeeecccc-
Confidence 4567777655 1211122334566666542 34 88999999999999999999999877511
Q ss_pred CcceEEEEecCCCCceEEEEecc-cchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEee-CeEEEEeeccc
Q 044173 98 PSYVVFVDCNNSPGAKFIHASLD-MAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELV-DGIFIGCSMNH 175 (455)
Q Consensus 98 ~g~~l~i~~~~~~gv~f~~~~~~-~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~-gG~~lg~~~~H 175 (455)
- ...+.......+........ ....+..+ .+.+.. .. ..+-...|++.+.+.... ++..|.+.+||
T Consensus 70 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~--~~~l~~~pl~~~~l~~~~~~~~~l~~~~hH 137 (301)
T PF00668_consen 70 -P-YQRVLESSSIEIEYIDVSSDSDSEEEILE------LIEQEL--NR--PFDLSEGPLFRFTLIRTSDDEYFLLISFHH 137 (301)
T ss_dssp -S-EEEEESEEETTCEEEECCTS-HHHHHHHH------HHHHHH--CC-----TCTSBSEEEEEEEEETTEEEEEEEEEG
T ss_pred -c-ceeeeeccccccccccccccccchhhhhh------hhhhhh--hh--cccccccchhhccccccccccchhcccccc
Confidence 1 22222211122222221110 00111110 000000 00 111134589998888775 58999999999
Q ss_pred ccccchhHHHHHHHHHHHHHhcCCCCC-CCCCCCCCc------cCCCC----------------CCCCcccCCCCccccc
Q 044173 176 VLGDGTSFWNFFNAFSEIFQAQGKMDS-ISRPPVVKR------WFPDG----------------RDPIINLPFTHRDEFI 232 (455)
Q Consensus 176 ~v~Dg~g~~~fl~~wa~~~r~~G~~~~-~~~~P~~dr------~~~~~----------------~~~~~~~p~~~~~~~~ 232 (455)
.++||.++..|++.+.+.+. |.... ....+.+.. ..... ..+....|.. .
T Consensus 138 ~i~Dg~S~~~l~~~l~~~y~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~~~~~~-----~ 210 (301)
T PF00668_consen 138 IICDGWSLNILLRELLQAYA--GLSNPLPAPSPSYKDFVEFQREYRNSDRLQEARAFWREYLRGVPPAPSLPPD-----F 210 (301)
T ss_dssp GG--HHHHHHHHHHHHHHHH--HHHTT----S-BHHHHHHHHHHHHTSHHHHHHHHHHHHHCCTS-----CTTT-----T
T ss_pred cccccccchhhhhhhHHhhh--cccccccccccccccccccccccccccccccccccccccccccccccccccc-----c
Confidence 99999999999999999998 41101 111111100 00000 0000000000 0
Q ss_pred ccCCC--CCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCC
Q 044173 233 RRYEA--PQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEP 310 (455)
Q Consensus 233 ~~~~~--~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p 310 (455)
..... .......+.++.+..++|++.+... .+|.++++.|.+-..+.+--+ .....+.+++++|.+-.
T Consensus 211 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~l~aa~~~~l~~~~~---~~~~~i~~~~~~R~~~~- 280 (301)
T PF00668_consen 211 PRPSIPSYSPSRISFSLSSELSKRLKEFAKQY------GVTPFAVLLAAFALALSRLTG---QDDVVIGTPVSGRPRSG- 280 (301)
T ss_dssp --CSSBEEBEEEEEEE--HHHHHHHHHHHHHT------TS-HHHHHHHHHHHHHHHHHT---TSEEEEEEEE---TTTS-
T ss_pred ccccccccccccccccccchhhhhhhhhhhhh------cccchhhhhhhhhhhhhhccc---cceeeecccccCCCCCC-
Confidence 00011 1123677889999999999988775 689999999987766665533 35689999999999922
Q ss_pred CCCCCCccccccccccee
Q 044173 311 PLPREYFGNSINPLRGVT 328 (455)
Q Consensus 311 ~lp~~Y~GN~~~~~~~~~ 328 (455)
+--.+-+|+.+.......
T Consensus 281 ~~~~~~vG~~~~~~P~~i 298 (301)
T PF00668_consen 281 PGFSNTVGPFVNTLPVRI 298 (301)
T ss_dssp CGGGGS-SS--EEEEEEE
T ss_pred cChhhCeeeEeEEEEEEE
Confidence 122455676666554443
No 11
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.03 E-value=0.00053 Score=79.88 Aligned_cols=249 Identities=18% Similarity=0.128 Sum_probs=137.1
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCce-EEEEecccchhhhcCCCCCCc-ccccccCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAK-FIHASLDMAISDILSPTYVPL-VVQSFFDHDRA 145 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~-f~~~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~ 145 (455)
.++|++||..++..++.|--++..... + ..++.. ....+. +... |+....+ +. ...++.-....
T Consensus 44 ~~~l~~Al~~lv~rh~~LRt~f~~~~g----~-~~q~v~-~~~~~~~~~~~-------d~~~~~~-~~~~~~~~~~~~~~ 109 (1296)
T PRK10252 44 APLLARAVVAGLAEADTLRMRFTEDNG----E-VWQWVD-PALTFPLPEII-------DLRTQPD-PHAAAQALMQADLQ 109 (1296)
T ss_pred HHHHHHHHHHHHHhccceEEEEEcCCC----e-EEEEEC-CCCCCCcCcee-------ecCCCCC-HHHHHHHHHHHHhc
Confidence 889999999999999999999876422 1 333333 222111 1111 1111000 00 00011100000
Q ss_pred CCCCCCC-CCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCCC--C-C------cc
Q 044173 146 LNHDGHS-RPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPPV--V-K------RW 212 (455)
Q Consensus 146 ~~~~~~~-~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P~--~-d------r~ 212 (455)
.+++-.. .|++++.+... .+...|.+.+||.++||.++..|++.+++++++. | .+....|. + + ++
T Consensus 110 ~~fdl~~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g--~~~~~~~~~~~~~~~~~~~~~ 187 (1296)
T PRK10252 110 QDLRVDSGKPLVFHQLIQLGDNRWYWYQRYHHLLVDGFSFPAITRRIAAIYCAWLRG--EPTPASPFTPFADVVEEYQRY 187 (1296)
T ss_pred CCcCCCCCCCCeEEEEEEEcCCEEEEEEecCceeEccccHHHHHHHHHHHHHHHhcC--CCCCCCCCccHHHHHHHHHHH
Confidence 0122223 49999999998 5789999999999999999999999999998742 3 12111121 1 0 00
Q ss_pred CCCCC-------------C--CCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHH
Q 044173 213 FPDGR-------------D--PIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALS 277 (455)
Q Consensus 213 ~~~~~-------------~--~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~ 277 (455)
..... + ++..+|.. ...............+.++.+..++|+..+. .+|.+.++.
T Consensus 188 ~~~~~~~~~~~yW~~~L~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~l~ 256 (1296)
T PRK10252 188 RASEAWQRDAAFWAEQRRQLPPPASLSPA---PLPGRSASADILRLKLEFTDGAFRQLAAQAS--------GVQRPDLAL 256 (1296)
T ss_pred hhCchhhHHHHHHHHHhcCCCCcccCCCC---CCCCccCCCcceeeeeecCHHHHHHHHHHHh--------cCCHHHHHH
Confidence 00000 0 00000000 0000001122334557789988888887543 257788888
Q ss_pred HHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 278 ALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 278 A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
|.+...+.+--+ .....+..++..|..-+ + .+..|..+......+... .+.++.+++..+++.+.+
T Consensus 257 aa~~~lL~r~sg---~~dv~ig~p~sgR~~~~--~-~~~vG~fvntlplr~~~~--~~~tf~~~l~~~~~~~~~ 322 (1296)
T PRK10252 257 ALVALWLGRLCG---RMDYAAGFIFMRRLGSA--A-LTATGPVLNVLPLRVHIA--AQETLPELATRLAAQLKK 322 (1296)
T ss_pred HHHHHHHHHHhC---CCceEEEEEecCCCchh--h-hcCCCcccceEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 877655554433 34678888998885432 2 344555555444444332 245777888887777755
No 12
>PRK12316 peptide synthase; Provisional
Probab=97.80 E-value=0.001 Score=86.72 Aligned_cols=256 Identities=14% Similarity=0.134 Sum_probs=146.1
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
++.|+++|..++..++.|-.++....+ + ..++.. ....+.+.+.... +.... .....+.+........+
T Consensus 86 ~~~l~~A~~~vv~rHe~LRt~f~~~~~----~-~~q~v~-~~~~~~~~~~d~~----~~~~~-~~~~~~~~~~~~~~~~p 154 (5163)
T PRK12316 86 RQALERAFASLVQRHETLRTVFPRGAD----D-SLAQVP-LDRPLEVEFEDCS----GLPEA-EQEARLRDEAQRESLQP 154 (5163)
T ss_pred HHHHHHHHHHHHHHhhhceEEEEeeCC----e-EEEEEC-CCCCCCccEEECC----CCChh-hHHHHHHHHHHHhhcCC
Confidence 789999999999999999999985433 2 223222 2333333221111 10000 00000111110000011
Q ss_pred CCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCC--CC-----CccCCCCC
Q 044173 148 HDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPP--VV-----KRWFPDGR 217 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P--~~-----dr~~~~~~ 217 (455)
++-...|++++.+... .+...+.+.+||.++||.++..|++.+++++++. |........| +. .+..+...
T Consensus 155 fdl~~~pl~r~~l~~~~~~~~~l~l~~HHii~Dg~S~~~l~~el~~~Y~~~~~~~~~~l~~~~~~y~dy~~~q~~~~~~~ 234 (5163)
T PRK12316 155 FDLCEGPLLRVRLLRLGEEEHVLLLTLHHIVSDGWSMNVLIEEFSRFYSAYATGAEPGLPALPIQYADYALWQRSWLEAG 234 (5163)
T ss_pred CCCCCCCceEEEEEEECCCcEEEEEcccceeechhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcCh
Confidence 2224578999988888 4778999999999999999999999999999842 3111111111 10 11111110
Q ss_pred ----------------CCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHH
Q 044173 218 ----------------DPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVW 281 (455)
Q Consensus 218 ----------------~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW 281 (455)
.+...+|..... +...........+.++.+..++|++.|+.. .+|.+.++.|.+.
T Consensus 235 ~~~~~~~yW~~~l~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~T~~~~llaa~a 305 (5163)
T PRK12316 235 EQERQLEYWRAQLGEEHPVLELPTDHPR---PAVPSYRGSRYEFSIDPALAEALRGTARRQ------GLTLFMLLLGAFN 305 (5163)
T ss_pred hHHHHHHHHHHHhCCCCccccCCCCCCC---CCCCCcCCeeEEEecCHHHHHHHHHHHHHc------CCCHHHHHHHHHH
Confidence 000111111000 001122345678999999999999999876 6899999999876
Q ss_pred HHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 282 RSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 282 ~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
..+.+--+ .....+.+++..|..-+ + .+-+|..+......+.++ .+.++.++...+++.+.+
T Consensus 306 ~lL~~~tg---~~dv~ig~pvs~R~~~~--~-~~~vG~f~n~lplr~~~~--~~~tf~~~l~~v~~~~~~ 367 (5163)
T PRK12316 306 VLLHRYSG---QTDIRVGVPIANRNRAE--V-EGLIGFFVNTQVLRSVFD--GRTRVATLLAGVKDTVLG 367 (5163)
T ss_pred HHHHHhcC---CCCeEEEeeeCCCCchh--h-hcceeeeeeeEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 66655432 45688999999996532 2 233444444443344332 235678888888877654
No 13
>PRK12467 peptide synthase; Provisional
Probab=97.76 E-value=0.0029 Score=81.02 Aligned_cols=256 Identities=12% Similarity=0.088 Sum_probs=145.1
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
+++|++|+..++..++.|--++....+.. + -+++.. ....+.+.+.... ........+..+........
T Consensus 2682 ~~~l~~A~~~vv~rH~~LRT~f~~~~~~~--~-~~Qvv~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 2750 (3956)
T PRK12467 2682 VERFRTAWQAVIDRHEILRSGFLWDGELE--E-PLQVVY-KQARLPFSRLDWR-------DRADLEQALDALAAADRQQG 2750 (3956)
T ss_pred HHHHHHHHHHHHHHhhhhheEEEecCCCC--C-ceEEEc-ccccCceeEeecc-------cchhHHHHHHHHHHhhhhcC
Confidence 88999999999999999999998654311 1 234444 2222333221110 00000000111110000001
Q ss_pred CCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccCCC---------
Q 044173 148 HDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVK--RWFPD--------- 215 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~d--r~~~~--------- 215 (455)
++-...|++++.+... .+...+-+.+||.++||.++..+++.+.+.+. |...+....++-| .++..
T Consensus 2751 fdl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DGwS~~~l~~el~~~Y~--~~~~~~~~~~y~dy~~~~~~~~~~~~~~y 2828 (3956)
T PRK12467 2751 FDLLSAPLLRLTLVRTGEDRHHLIYTNHHILMDGWSGSQLLGEVLQRYF--GQPPPAREGRYRDYIAWLQAQDAEASEAF 2828 (3956)
T ss_pred CCCCCCcceEEEEEEEcCcEEEEEEecCceeEcCccHHHHHHHHHHHhc--CCCCCCCCCCHHHHHHHHhcccHHHHHHH
Confidence 2223569998888887 46788999999999999999999999999998 5211111112111 11110
Q ss_pred ------CCCCCcccCCCCcccccccC-CCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhc
Q 044173 216 ------GRDPIINLPFTHRDEFIRRY-EAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTR 288 (455)
Q Consensus 216 ------~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar 288 (455)
...++..++.... .... .........+.++.+..++|++.+.+. .+|.+.++.|.+-..+.+--
T Consensus 2829 W~~~L~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------~vT~~~v~~aAwa~~L~~~t 2899 (3956)
T PRK12467 2829 WKEQLAALEEPTRLARALY---PAPAEAVAGHGAHYLHLDATQTRQLIEFARRH------RVTLNTLVQGAWLLLLQRFT 2899 (3956)
T ss_pred HHHHhcCCCcccccccccC---CCccccccCcceEEEEcCHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHHhc
Confidence 0001111110000 0000 111223567789999999999998876 58999999987433333222
Q ss_pred CCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 289 NLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 289 ~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
......|..++.+|..--+.+ ++-.|-.+......+.+. .+.++.++...+++...+
T Consensus 2900 ---g~~dv~fG~~vsGR~~~~~~~-e~~vG~fintlp~r~~~~--~~~~~~~~l~~v~~~~~~ 2956 (3956)
T PRK12467 2900 ---GQDTVCFGATVAGRPAQLRGA-EQQLGLFINTLPVIASPR--AEQTVSDWLQQVQAQNLA 2956 (3956)
T ss_pred ---CCCCEEEEeeeCCCCCCccCh-hhheeeeeeceeEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 245678999999996532122 455666666555555433 246788888888776544
No 14
>PRK12467 peptide synthase; Provisional
Probab=97.70 E-value=0.0034 Score=80.46 Aligned_cols=256 Identities=17% Similarity=0.188 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
.+.|++++.+++..++.|--++....+ + -.++.. ....+.+.....+ ..... .....+..+........
T Consensus 86 ~~~L~~A~~~vv~rH~~LRt~f~~~~~----~-~~q~v~-~~~~~~i~~~d~~----~~~~~-~~~~~~~~~~~~~~~~~ 154 (3956)
T PRK12467 86 VSALRRAFDALVARHESLRTRFVQDEE----G-FRQVID-ASLSLTIPLDDLA----NEQGR-ARESQIEAYINEEVARP 154 (3956)
T ss_pred HHHHHHHHHHHHHHhhhheEEEEecCC----e-EEEEEc-CCCCCceeEEecc----cCChh-hHHHHHHHHHHHHhcCC
Confidence 889999999999999999999985432 2 233333 2222222211110 00000 00000111110000011
Q ss_pred CCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCC--CCC-----ccCCCCC
Q 044173 148 HDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPP--VVK-----RWFPDGR 217 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P--~~d-----r~~~~~~ 217 (455)
++-...|++++.+... .+...+-+.+||.++||.++..+++.+++.+... |...+....| +.| +..+...
T Consensus 155 fdL~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~~~~~~~~y~dy~~~~~~~l~~~ 234 (3956)
T PRK12467 155 FDLANGPLLRVRLLRLADDEHVLVVTLHHIISDGWSMRVLVEELVQLYSAYSQGREPSLPALPIQYADYAIWQRSWLEAG 234 (3956)
T ss_pred CCCCCCCceEEEEEEECCCcEEEEEecCeeeEccchHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcCh
Confidence 2224578999888887 4778999999999999999999999999998632 3111111111 111 1111110
Q ss_pred ----------------CCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHH
Q 044173 218 ----------------DPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVW 281 (455)
Q Consensus 218 ----------------~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW 281 (455)
.++..+|..... +...........+.++.+..++|++.|+.. .+|.+.++.|.+.
T Consensus 235 ~~~~~~~yW~~~L~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------g~T~~~vl~aA~a 305 (3956)
T PRK12467 235 ERERQLAYWQEQLGGEHTVLELPTDRPR---PAVPSYRGARLRVDLPQALSAGLKALAQRE------GVTLFMVLLASFQ 305 (3956)
T ss_pred hhHHHHHHHHHHhccCCCcCCCCCCCCC---CCCCCcCceeEEEeCCHHHHHHHHHHHHHh------CCCHHHHHHHHHH
Confidence 000111110000 000112234667889999999999999876 6899999999876
Q ss_pred HHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 282 RSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 282 ~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
..+.|--+ .....+..++..|..-+ + ++-+|-.+......+.++ .+.++.++...+++.+.+
T Consensus 306 ~lL~r~tg---~~dv~iG~pvsgR~~~~--~-~~~iG~fiNtlplrv~~~--~~~t~~~ll~~v~~~~~~ 367 (3956)
T PRK12467 306 TLLHRYSG---QSDIRIGVPNANRNRVE--T-ERLIGFFVNTQVLKAEVD--PQASFLELLQQVKRTALG 367 (3956)
T ss_pred HHHHHhcC---CCCEEEEeccCCCCchh--h-hcceeeeeeeeeeEeecC--CCCCHHHHHHHHHHHHHH
Confidence 55554433 45689999999997532 2 334444444444444332 245688888888877654
No 15
>PRK12316 peptide synthase; Provisional
Probab=97.50 E-value=0.0091 Score=78.28 Aligned_cols=251 Identities=16% Similarity=0.155 Sum_probs=142.7
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEe-cccchhhhcCCCCCCcccccccCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHAS-LDMAISDILSPTYVPLVVQSFFDHDRAL 146 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~-~~~~l~~l~~~~~~p~~~~~l~p~~~~~ 146 (455)
.++|++|+..++..++.|--++..... + ..++.. ......+.... .+..-+++. ..+.+... .
T Consensus 2639 ~~~L~~A~~~lv~rH~~LRt~f~~~~~----~-~~q~v~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~----~ 2702 (5163)
T PRK12316 2639 QAALEQAFDALVLRHETLRTRFVEVGE----Q-TRQVIL-PNMSLRIVLEDCAGVADAAIR------QRVAEEIQ----R 2702 (5163)
T ss_pred HHHHHHHHHHHHHHhhHhhcceeeeCC----e-EEEEEC-CCCCccceeeccccCCHHHHH------HHHHHHhh----C
Confidence 789999999999999999999986543 2 333333 22222111110 000000110 00000000 0
Q ss_pred CCCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCCC-C-C-----ccCCCC
Q 044173 147 NHDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPPV-V-K-----RWFPDG 216 (455)
Q Consensus 147 ~~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P~-~-d-----r~~~~~ 216 (455)
.++-...|++++.+... .+...+.+.+||.++||.++..|++.+.+.+++. |........|. + | +.....
T Consensus 2703 ~fdl~~~pl~r~~l~~~~~~~~~l~l~~HHii~DG~S~~~l~~eL~~~Y~~~~~g~~~~l~~~~~~y~dy~~~~~~~~~~ 2782 (5163)
T PRK12316 2703 PFDLARGPLLRVRLLALDGQEHVLVITQHHIVSDGWSMQVMVDELVQAYAGARRGEQPTLPPLPLQYADYAAWQRAWMDS 2782 (5163)
T ss_pred CCCCCCCCcEEEEEEEECCCeEEEEEecCcCcccHhHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcC
Confidence 11223468988888777 4568889999999999999999999999999842 31111111111 0 0 000100
Q ss_pred C----------------CCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q 044173 217 R----------------DPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALV 280 (455)
Q Consensus 217 ~----------------~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~l 280 (455)
. .+...+|..... +...........+.++.+..++|++.+.+. .+|.+.++.|.+
T Consensus 2783 ~~~~~~~~yW~~~L~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------~vT~~~~l~aA~ 2853 (5163)
T PRK12316 2783 GEGARQLDYWRERLGGEQPVLELPLDRPR---PALQSHRGARLDVALDVALSRELLALARRE------GVTLFMLLLASF 2853 (5163)
T ss_pred chHHHHHHHHHHHhcCCCCcccCCccCCC---CccCCCCCceEEEECCHHHHHHHHHHHHHh------CCCHHHHHHHHH
Confidence 0 000011110000 000122334567889999999999998876 589999999977
Q ss_pred HHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 281 WRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 281 W~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
...+.+--+ .....+..+++.|..-+ + ++-+|-.+......+... .+.++.+++..+++...+
T Consensus 2854 a~~L~r~tg---~~dv~iG~pvsgR~~~~--~-~~~iG~fvntlPlrv~l~--~~~t~~~ll~~v~~~~~~ 2916 (5163)
T PRK12316 2854 QVLLHRYSG---QSDIRVGVPIANRNRAE--T-ERLIGFFVNTQVLRAQVD--AQLAFRDLLGQVKEQALG 2916 (5163)
T ss_pred HHHHHHhcC---CCceEEEeeecCCCchh--H-HhhhhheecceeEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 555544432 45688999999994321 2 334455555444444332 246777888888777654
No 16
>PRK05691 peptide synthase; Validated
Probab=97.50 E-value=0.009 Score=77.42 Aligned_cols=256 Identities=15% Similarity=0.177 Sum_probs=142.5
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
+++|++|+..++..++.|--++....+ + .+++.. ....+.+...... ++... .....+..+.......+
T Consensus 1765 ~~~L~~A~~~lv~rH~~LRT~f~~~~~----~-~~q~v~-~~~~~~~~~~d~~----~~~~~-~~~~~~~~~~~~~~~~~ 1833 (4334)
T PRK05691 1765 VDRFEAALQALILRHETLRTTFPSVDG----V-PVQQVA-EDSGLRMDWQDFS----ALPAD-ARQQRLQQLADSEAHQP 1833 (4334)
T ss_pred HHHHHHHHHHHHHhCCcceEEEEccCC----e-EEEEEC-CCCCCCeeEeecc----CCChH-hHHHHHHHHHHHHHhcC
Confidence 889999999999999999999885432 2 333333 3333333221111 00000 00000011100000001
Q ss_pred CCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCCC--CC-----ccCCCCC
Q 044173 148 HDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPPV--VK-----RWFPDGR 217 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P~--~d-----r~~~~~~ 217 (455)
++-...|++++.+... .+...+-+.+||.++||.++..+++.+++++++. |...+....|. .| +..+...
T Consensus 1834 fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~ll~~el~~~Y~~~~~~~~~~~~~~~~~y~dy~~~~~~~l~~~ 1913 (4334)
T PRK05691 1834 FDLERGPLLRACLVKAAEREHYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRESPLEPLPVQYLDYSVWQRQWLESG 1913 (4334)
T ss_pred CCCCCCceeEEEEEEeCCCcEEEEEecchhhhhhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcCh
Confidence 2223468888888777 4568899999999999999999999999999742 31111111111 11 1011110
Q ss_pred ----------------CCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHH
Q 044173 218 ----------------DPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVW 281 (455)
Q Consensus 218 ----------------~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW 281 (455)
.+...+|..... +...........+.++.+..++|++.+... .+|.+.++.|.+.
T Consensus 1914 ~~~~~~~yW~~~L~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~vT~~~~l~aA~a 1984 (4334)
T PRK05691 1914 ERQRQLDYWKAQLGNEHPLLELPADRPR---PPVQSHRGELYRFDLSPELAARVRAFNAQR------GLTLFMTMTATLA 1984 (4334)
T ss_pred hhHHHHHHHHHHhcCCCCcccCCCCCCC---CcccCcCceEEEEECCHHHHHHHHHHHHHh------CCCHHHHHHHHHH
Confidence 000011110000 000112234567789999999999988775 5899999888765
Q ss_pred HHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 282 RSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 282 ~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
..+.+-- ......+..++..|..- .+ ++-+|-++......+.++ .+.++.+..+.+++.+.+
T Consensus 1985 ~lL~r~s---g~~dvv~G~~vsgR~~~--~~-~~~vG~fvntlPlrv~~~--~~~t~~~ll~~v~~~~~~ 2046 (4334)
T PRK05691 1985 ALLYRYS---GQRDLRIGAPVANRIRP--ES-EGLIGAFLNTQVLRCQLD--GQMSVSELLEQVRQTVIE 2046 (4334)
T ss_pred HHHHHhc---CCCCeEEEecccCCCch--hh-hcceeeeeeeeeEEeecC--CCCCHHHHHHHHHHHHHH
Confidence 5554432 24568889999999642 22 445566665555555443 245677777777776644
No 17
>PRK05691 peptide synthase; Validated
Probab=97.19 E-value=0.036 Score=72.08 Aligned_cols=256 Identities=17% Similarity=0.186 Sum_probs=139.7
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
+++|++++..++..+|.|--++....+ + .+++.. ....+.+.+.. +.++... .....+..+.-......
T Consensus 712 ~~~l~~A~~~lv~rh~~LRt~f~~~~~----~-~~q~v~-~~~~~~~~~~d----~~~~~~~-~~~~~~~~~~~~~~~~~ 780 (4334)
T PRK05691 712 EAALRASFQRLVERHESLRTRFYERDG----V-ALQRID-AQGEFALQRID----LSDLPEA-EREARAAQIREEEARQP 780 (4334)
T ss_pred HHHHHHHHHHHHHHhhhhcEEEEccCC----e-EEEEEC-CCCCCcceEEe----CCCCChH-HHHHHHHHHHHHHhcCC
Confidence 889999999999999999999874322 2 333333 22222222211 1111000 00000000000000001
Q ss_pred CCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCCC-C-C-----ccCCCCC
Q 044173 148 HDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPPV-V-K-----RWFPDGR 217 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P~-~-d-----r~~~~~~ 217 (455)
++-...|++++.+... .+...+.+.+||.++||.++..+++.+++.++.. |........+. + + +..+...
T Consensus 781 fdl~~~pl~R~~l~~~~~~~~~l~l~~HHii~DG~S~~ll~~el~~~Y~~~~~g~~~~l~~~~~~y~dy~~~~~~~l~~~ 860 (4334)
T PRK05691 781 FDLEKGPLLRVTLVRLDDEEHQLLVTLHHIVADGWSLNILLDEFSRLYAAACQGQTAELAPLPLGYADYGAWQRQWLAQG 860 (4334)
T ss_pred CCCCCCCceEEEEEEEcCCeEEEEEeeCceeeccchHHHHHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhcCh
Confidence 2224569999988887 4678999999999999999999999999998742 31111111110 1 1 0000000
Q ss_pred --------------C--CCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHH
Q 044173 218 --------------D--PIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVW 281 (455)
Q Consensus 218 --------------~--~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW 281 (455)
+ +...+|.... .............+.++.+..++|++.|+.. .+|.+.++.|.+.
T Consensus 861 ~~~~~~~yW~~~L~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------gvT~~~vl~aa~a 931 (4334)
T PRK05691 861 EAARQLAYWKAQLGDEQPVLELATDHP---RSARQAHSAARYSLRVDASLSEALRGLAQAH------QATLFMVLLAAFQ 931 (4334)
T ss_pred hHHHHHHHHHHHhCCCCCccCCCCCCC---CCccCCcCceEEEEeCCHHHHHHHHHHHHHc------CCCHHHHHHHHHH
Confidence 0 0000010000 0000112234567889999999999998876 5899999998865
Q ss_pred HHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 282 RSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 282 ~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
..+.+--+ .....+.+++..|..-+ + ++-.|-.+......+.++ .+.++.++...+++.+.+
T Consensus 932 llL~rytg---~~dv~~G~~~sgR~~~~--~-~~~vG~fintlplr~~~~--~~~t~~~ll~~v~~~~~~ 993 (4334)
T PRK05691 932 ALLHRYSG---QGDIRIGVPNANRPRLE--T-QGLVGFFINTQVLRAQLD--GRLPFTALLAQVRQATLG 993 (4334)
T ss_pred HHHHHHhC---CCCEEEEecccCCCchh--h-hcceeeeeeeeeEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 55544432 45678888888884321 2 233344444333333332 235677788777776654
No 18
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins. O-acyltransferase WSD1 is a bifunctional wax ester synthase/diacylglycerol acyltransferase, which is involved in cuticular wax biosynthesis [].; GO: 0004144 diacylglycerol O-acyltransferase activity
Probab=95.54 E-value=0.059 Score=51.12 Aligned_cols=131 Identities=18% Similarity=0.244 Sum_probs=72.7
Q ss_pred ccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecC-CCCceEEEEec
Q 044173 41 YIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNN-SPGAKFIHASL 119 (455)
Q Consensus 41 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~-~~gv~f~~~~~ 119 (455)
++..+++|..+... . .....+.|++.+..-+..+|.|.-|++..+... |.-.|+.-.+ +-...+.+...
T Consensus 19 hv~~~~~~~~~~~~--~------~~~~~~~l~~~~~~r~~~~p~fr~rv~~~~~~~--~~p~W~~d~~fDl~~Hv~~~~l 88 (263)
T PF03007_consen 19 HVGALAIFDPPTDG--A------PPLDVERLRARLEARLARHPRFRQRVVRVPFGL--GRPRWVEDPDFDLDYHVRRVAL 88 (263)
T ss_pred eEEEEEEEEcCCCC--C------CcchHHHHHHHHHHhhccCCccccceecCCCCC--CCEEEEECCCCChHHceEEecC
Confidence 45567788776320 0 111277899999999999999999999765432 3234444411 11111111111
Q ss_pred --ccchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEE-ee-CeEEEEeecccccccchhHHHHHHHHHH
Q 044173 120 --DMAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTE-LV-DGIFIGCSMNHVLGDGTSFWNFFNAFSE 192 (455)
Q Consensus 120 --~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~-~~-gG~~lg~~~~H~v~Dg~g~~~fl~~wa~ 192 (455)
..+.+++.+ .+.++... + ++ ...|+=.+.+-. +. |+++|.+.+||+++||.+...++..+.+
T Consensus 89 ~~pg~~~~l~~------~v~~l~~~-p-Ld---~~rPlWe~~li~g~~~g~~Al~~k~HHal~DG~~~~~l~~~l~~ 154 (263)
T PF03007_consen 89 PAPGDRAELQA------LVSRLAST-P-LD---RSRPLWEVHLIEGLEGGRFALVLKVHHALADGVSLMRLLAALLD 154 (263)
T ss_pred CCCCCHHHHHH------HHHHHhcC-C-CC---CCCCCcEEEEEecCCCCcEEEEEeehhhhhhhHhHHHHHHHHhC
Confidence 112222210 11122211 1 11 245666665544 33 5689999999999999999998866543
No 19
>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi. In Fusarium sporotrichioides, this is required for acetylation of the C-15 hydroxyl group of trichothecenes in the biosynthesis of T-2 toxin [].; PDB: 3FP0_A 3FOT_A.
Probab=91.39 E-value=0.8 Score=44.07 Aligned_cols=85 Identities=19% Similarity=0.188 Sum_probs=49.3
Q ss_pred eeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCC--CC-CceEEEEeecCCCCCCCCCCCCCc
Q 044173 241 LERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLP--PD-QTTSCRMAADNRPRLEPPLPREYF 317 (455)
Q Consensus 241 ~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~--~~-~~~~~~~~vd~R~rl~p~lp~~Y~ 317 (455)
.+....|+.++-.+|++.+...+ ++..|..-...|-+--++-+-...+ ++ .....-++||+|++|.+.+..+|+
T Consensus 269 r~~i~~fs~~eS~Ai~k~vKt~~---gP~~TisHL~qAAvllALL~~~~P~d~~D~~~~isp~~v~GRR~Lr~~~a~~~Y 345 (413)
T PF07428_consen 269 RCIIHSFSAEESIAIKKAVKTRL---GPKYTISHLGQAAVLLALLRDLKPTDLPDSQAFISPMPVNGRRWLRPKIAKNYY 345 (413)
T ss_dssp EEEEEE--HHHHHHHHHHHHHHT----TT--HHHHHHHHHHHHHHHH-------TT--EEEEEEEE-GGGB-HHHHTS--
T ss_pred ceecccCChhhhHHHHHHHhccc---CCCcCHHHHHHHHHHHHHHhccCCCCCCCcceEecccccCcchhcccchhhhhh
Confidence 45667799999999999998763 4567777777776655554443221 12 335666789999999877889999
Q ss_pred cccccccccee
Q 044173 318 GNSINPLRGVT 328 (455)
Q Consensus 318 GN~~~~~~~~~ 328 (455)
+-|-..+.+..
T Consensus 346 ~~cqt~a~V~~ 356 (413)
T PF07428_consen 346 AICQTAAVVRF 356 (413)
T ss_dssp S--EEEEEEEE
T ss_pred hhhhccceEEE
Confidence 98887766654
No 20
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=73.46 E-value=3.6 Score=37.71 Aligned_cols=29 Identities=14% Similarity=0.298 Sum_probs=26.2
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++.+||+++||.-++.|++.+-+.+.
T Consensus 185 mPvSvqvHHa~~DG~Hv~~F~~~lQ~~~~ 213 (219)
T PRK13757 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_pred EEEEEEEehhccchHHHHHHHHHHHHHHH
Confidence 88899999999999999999999887764
No 21
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=70.78 E-value=3.6 Score=37.32 Aligned_cols=39 Identities=23% Similarity=0.318 Sum_probs=25.8
Q ss_pred CCCeEEEEEEEeeCe---EEEEeecccccccchhHHHHHHHH
Q 044173 152 SRPLLSIQVTELVDG---IFIGCSMNHVLGDGTSFWNFFNAF 190 (455)
Q Consensus 152 ~~p~l~vqvt~~~gG---~~lg~~~~H~v~Dg~g~~~fl~~w 190 (455)
..|.+..==-.-+|| +-|++.+||+++||.-+++|++.+
T Consensus 164 ~~P~it~GK~~~~~gr~~mPvsiqvhHa~~DG~Hv~~F~~~l 205 (206)
T PF00302_consen 164 SIPRITWGKYFEENGRLLMPVSIQVHHALVDGYHVGQFFEEL 205 (206)
T ss_dssp SS-EEEEE--EEETTEEEEEEEEEEETTT--HHHHHHHHHHH
T ss_pred cccEEEeeeeEeECCEEEEEEEEEEecccccHHHHHHHHHHh
Confidence 467665421111566 889999999999999999999764
No 22
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=61.22 E-value=7.8 Score=39.30 Aligned_cols=29 Identities=24% Similarity=0.448 Sum_probs=27.1
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++||.++||.-+..|++.+.+...
T Consensus 375 m~lslt~DHRviDG~~aa~Fl~~l~~~le 403 (411)
T PRK11856 375 MPLSLSFDHRVIDGADAARFLKALKELLE 403 (411)
T ss_pred EEEeEEeehhhcCcHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 23
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=55.13 E-value=11 Score=39.68 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=26.9
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++||.++||.-...||+.|.+.+.
T Consensus 512 m~lslt~DHRviDG~~aa~Fl~~l~~~le 540 (547)
T PRK11855 512 LPLSLSYDHRVIDGATAARFTNYLKQLLA 540 (547)
T ss_pred EEEeEEccchhcCcHHHHHHHHHHHHHHh
Confidence 66999999999999999999999998875
No 24
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=50.09 E-value=19 Score=33.39 Aligned_cols=30 Identities=17% Similarity=0.364 Sum_probs=26.8
Q ss_pred eEEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 166 GIFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 166 G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
-+-|++++.|-+.||.-+..|++.+.+...
T Consensus 195 ~~~lslt~DHRvidG~~aa~Fl~~l~~~le 224 (231)
T PF00198_consen 195 VMNLSLTFDHRVIDGAEAARFLKDLKELLE 224 (231)
T ss_dssp EEEEEEEEETTTS-HHHHHHHHHHHHHHHH
T ss_pred EEEeEEeccceEEcHHHHHHHHHHHHHHHh
Confidence 477899999999999999999999999886
No 25
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=43.76 E-value=23 Score=34.32 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=26.8
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-...|++.|.+...
T Consensus 270 m~lslt~DHRviDGa~aa~Fl~~lk~~LE 298 (306)
T PRK11857 270 MHLTVAADHRWIDGATIGRFASRVKELLE 298 (306)
T ss_pred eEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45899999999999999999999999886
No 26
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=43.57 E-value=21 Score=38.38 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=26.8
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-...|++.|.+...
T Consensus 598 m~lslt~DHRviDGa~aa~Fl~~lk~~LE 626 (633)
T PRK11854 598 LPLSLSYDHRVIDGADGARFITIINDRLS 626 (633)
T ss_pred EEEeEEccchhcchHHHHHHHHHHHHHHh
Confidence 44899999999999999999999999886
No 27
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=42.41 E-value=24 Score=36.07 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=27.0
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-+..|++.|.+...
T Consensus 400 m~lsls~DHRviDGa~aa~Fl~~lk~~lE 428 (435)
T TIGR01349 400 MSVTLSCDHRVIDGAVGAEFLKSFKKYLE 428 (435)
T ss_pred EEEeEeecchhhCcHHHHHHHHHHHHHHh
Confidence 56999999999999999999999999886
No 28
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=41.98 E-value=25 Score=35.66 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=27.0
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-...||+.|.+...
T Consensus 378 m~lslt~DHRviDGa~aa~Fl~~lk~~le 406 (416)
T PLN02528 378 MTVTIGADHRVLDGATVARFCNEWKSYVE 406 (416)
T ss_pred EEEeEeccchhcCcHHHHHHHHHHHHHHh
Confidence 45999999999999999999999999886
No 29
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=41.25 E-value=26 Score=34.62 Aligned_cols=29 Identities=21% Similarity=0.465 Sum_probs=26.6
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.....|++.|.+...
T Consensus 312 m~lsls~DHRviDGa~aa~Fl~~lk~~lE 340 (347)
T PRK14843 312 MSLGLTIDHRVVDGMAGAKFMKDLKELIE 340 (347)
T ss_pred EEEEEecchhhhCcHHHHHHHHHHHHHhc
Confidence 45899999999999999999999998875
No 30
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=40.30 E-value=27 Score=35.34 Aligned_cols=30 Identities=17% Similarity=0.421 Sum_probs=27.4
Q ss_pred eEEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 166 GIFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 166 G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
.+-|++++.|-+.||.-+..|++.|.+...
T Consensus 380 ~m~lsLs~DHRviDGa~AA~FL~~lk~~LE 409 (418)
T PTZ00144 380 IMYLALTYDHRLIDGRDAVTFLKKIKDLIE 409 (418)
T ss_pred EEEEEEecchhhhChHHHHHHHHHHHHHhc
Confidence 366999999999999999999999998875
No 31
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=40.25 E-value=28 Score=35.22 Aligned_cols=29 Identities=21% Similarity=0.479 Sum_probs=26.8
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.....|++.|.+...
T Consensus 370 ~~lsls~DHRviDGa~aa~Fl~~l~~~le 398 (407)
T PRK05704 370 MYLALSYDHRIIDGKEAVGFLVTIKELLE 398 (407)
T ss_pred EEEEEEechhhhCcHHHHHHHHHHHHHhh
Confidence 34899999999999999999999999886
No 32
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=38.71 E-value=30 Score=34.96 Aligned_cols=29 Identities=24% Similarity=0.494 Sum_probs=26.8
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-...|++.+.+...
T Consensus 366 m~lsLt~DHRviDGa~aa~Fl~~l~~~le 394 (403)
T TIGR01347 366 MYLALSYDHRLIDGKEAVTFLVTIKELLE 394 (403)
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHhc
Confidence 45999999999999999999999999886
No 33
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=36.36 E-value=34 Score=35.14 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=27.2
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-...|++.|.+...
T Consensus 426 m~lsLs~DHRVIDGa~aA~FL~~lk~~LE 454 (463)
T PLN02226 426 MYVALTYDHRLIDGREAVYFLRRVKDVVE 454 (463)
T ss_pred EEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 66999999999999999999999999885
No 34
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=35.36 E-value=35 Score=36.41 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=27.0
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.....|++.|.+...
T Consensus 552 m~lsls~DHRviDGa~aa~Fl~~lk~~LE 580 (590)
T TIGR02927 552 CHLPLTYDHQLIDGADAGRFLTTIKDRLE 580 (590)
T ss_pred EEEeeeccchhcCcHHHHHHHHHHHHHHh
Confidence 44999999999999999999999999987
No 35
>PF01402 RHH_1: Ribbon-helix-helix protein, copG family; InterPro: IPR002145 CopG, also known as RepA, is responsible for the regulation of plasmid copy number. It binds to the repAB promoter and controls synthesis of the plasmid replication initiator protein RepB. Many bacterial transcription regulation proteins bind DNA through a 'helix-turn-helix' motif, nevertheless CopG displays a fully defined HTH-motif structure that is involved not in DNA-binding, but in the maintenance of the intrinsic dimeric functional structure and cooperativity [, ].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2BJ3_B 2BJ8_A 2BJ1_A 2BJ9_A 2BJ7_B 1EA4_L 2CPG_C 1B01_B 2BA3_A 2K9I_B ....
Probab=33.58 E-value=1.2e+02 Score=18.78 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=27.8
Q ss_pred EEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHH
Q 044173 243 RIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWR 282 (455)
Q Consensus 243 ~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~ 282 (455)
-+++++.+..++|.+.|... ..|..+++...+=.
T Consensus 2 iti~l~~~~~~~l~~~a~~~------g~s~s~~ir~ai~~ 35 (39)
T PF01402_consen 2 ITIRLPDELYERLDELAKEL------GRSRSELIREAIRE 35 (39)
T ss_dssp EEEEEEHHHHHHHHHHHHHH------TSSHHHHHHHHHHH
T ss_pred eEEEeCHHHHHHHHHHHHHH------CcCHHHHHHHHHHH
Confidence 46899999999999999887 47888888776643
No 36
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=32.68 E-value=41 Score=35.48 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=26.7
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++.|-+.||.-...|++.|.+...
T Consensus 511 m~ltls~DHRviDGa~aa~Fl~~~~~~le 539 (546)
T TIGR01348 511 LPLSLSYDHRVIDGADAARFTTYICESLA 539 (546)
T ss_pred EEEeEeccchhcChHHHHHHHHHHHHHHh
Confidence 44899999999999999999999999886
No 37
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=31.72 E-value=42 Score=35.19 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=27.3
Q ss_pred eEEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 166 GIFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 166 G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
-+-|++++.|-+.||.....||+.|.+...
T Consensus 503 ~m~lsLs~DHRvIDGa~AA~FL~~lk~~LE 532 (539)
T PLN02744 503 FMSVTLSCDHRVIDGAIGAEWLKAFKGYIE 532 (539)
T ss_pred eeEEeEecchhhhCcHHHHHHHHHHHHHhc
Confidence 356899999999999999999999998875
No 38
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=30.73 E-value=58 Score=29.24 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCCCeEEEEEEEeeCe---EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 151 HSRPLLSIQVTELVDG---IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 151 ~~~p~l~vqvt~~~gG---~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
...|.+..==-.-++| +-+++-.||+.+||.-+.+|++.+-....
T Consensus 165 ~~~PiF~~Grf~~~~Gkl~lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~ 212 (219)
T COG4845 165 YGQPIFYAGRFYEEDGKLTLPLAVQAHHANVDGFHIGQLFDQLQTLFS 212 (219)
T ss_pred ccceeEeecceeccCCeEEEeEEEEecccccchhhHHHHHHHHHHHhc
Confidence 3567765532222566 66788899999999999999988766664
No 39
>KOG1212 consensus Amidases [Translation, ribosomal structure and biogenesis; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=22.23 E-value=78 Score=33.22 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcC
Q 044173 248 TGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRN 289 (455)
Q Consensus 248 ~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~ 289 (455)
-...+.+|++++++. .+|..++|+|++||++.-.+.
T Consensus 53 l~~~~~~L~~~L~~~------e~~~~~vl~Ay~~Ra~~vn~~ 88 (560)
T KOG1212|consen 53 LKLDATELAQALQSG------ELTSVEVLCAYCHRAIEVNQK 88 (560)
T ss_pred hhcCHHHHHHHHHhC------cCcHHHHHHHHHHHHHHhccC
Confidence 344567788887765 599999999999998865543
No 40
>PF08252 Leader_CPA1: arg-2/CPA1 leader peptide ; InterPro: IPR013203 In this family there are leaders peptides involved in the regulation of the glutaminase subunit (small subunit) of arginine-specific carbamoyl phosphate synthetase. In Neurospora crassa it is a small upstream ORF of 24 codons above the arg-2 locus []. In yeast it is the leader peptide of the CPA1 gene. The 5' region of CPA1 mRNA contains a 25 codon upstream open reading frame. The leader peptide, the product of the upstream open reading frame, plays an essential, negative role in the specific repression of CPA1 by arginine [].; PDB: 2XL1_A.
Probab=21.60 E-value=1.2e+02 Score=16.90 Aligned_cols=18 Identities=17% Similarity=0.438 Sum_probs=11.4
Q ss_pred CCcCHHHHHHHHHHHHHH
Q 044173 268 NKISSFQALSALVWRSIT 285 (455)
Q Consensus 268 ~~~St~d~l~A~lW~~i~ 285 (455)
+..+..|-|+-++|+...
T Consensus 6 S~~t~qDYiSDhiWk~~s 23 (24)
T PF08252_consen 6 SVFTSQDYISDHIWKASS 23 (24)
T ss_dssp -----HHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHhhc
Confidence 357889999999999753
Done!