Query 044173
Match_columns 455
No_of_seqs 131 out of 1281
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 21:13:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 1.5E-77 5.2E-82 609.9 44.1 417 1-445 3-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 2.5E-71 8.7E-76 561.1 35.8 406 4-454 3-416 (421)
3 2xr7_A Malonyltransferase; xen 100.0 9.1E-71 3.1E-75 562.9 36.3 418 6-445 2-444 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.7E-71 9.2E-76 566.8 31.3 419 1-445 1-444 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 2.6E-65 9E-70 522.5 37.0 410 26-454 4-448 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 3.2E-08 1.1E-12 98.8 25.2 285 24-351 5-313 (422)
7 2jgp_A Tyrocidine synthetase 3 98.7 5.8E-06 2E-10 84.9 24.9 246 68-351 133-400 (520)
8 4hvm_A Tlmii; PSI-biology, mid 98.4 4.2E-06 1.4E-10 85.4 17.0 283 24-351 11-327 (493)
9 1l5a_A Amide synthase, VIBH; n 98.4 9.5E-06 3.2E-10 81.2 18.8 240 68-351 35-304 (436)
10 2xhg_A Tyrocidine synthetase A 98.4 9.4E-05 3.2E-09 74.6 24.3 290 24-353 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.3 6.1E-05 2.1E-09 86.0 23.1 257 68-351 49-327 (1304)
12 3fot_A 15-O-acetyltransferase; 98.1 0.0011 3.6E-08 67.8 25.6 247 64-328 71-365 (519)
13 3cla_A Type III chloramphenico 74.3 2.2 7.4E-05 37.7 3.5 44 152-195 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 73.7 2.3 7.8E-05 37.7 3.5 43 152-194 171-216 (217)
15 1q23_A Chloramphenicol acetylt 72.6 2.5 8.6E-05 37.5 3.5 43 153-195 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.5 3 0.0001 37.6 3.5 29 167-195 204-232 (239)
17 3rqc_A Probable lipoamide acyl 70.1 2.6 9E-05 37.5 3.0 29 167-195 187-215 (224)
18 1scz_A E2, dihydrolipoamide su 69.5 3.2 0.00011 37.2 3.5 29 167-195 196-224 (233)
19 1dpb_A Dihydrolipoyl-transacet 69.3 3.2 0.00011 37.4 3.5 29 167-195 208-236 (243)
20 2ii3_A Lipoamide acyltransfera 67.8 3.6 0.00012 37.6 3.5 29 167-195 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 63.2 5 0.00017 36.5 3.5 29 167-195 210-238 (256)
22 3l60_A Branched-chain alpha-ke 62.0 5.8 0.0002 35.9 3.7 29 167-195 205-233 (250)
23 1x93_A Hypothetical protein HP 44.7 22 0.00076 22.8 3.1 22 241-262 2-23 (55)
24 2xl1_A Arginine attenuator pep 42.9 15 0.00052 19.4 1.8 19 268-286 6-24 (26)
25 3dva_I Dihydrolipoyllysine-res 41.8 5.4 0.00019 39.2 0.0 29 167-195 391-419 (428)
26 4hhu_A OR280; engineered prote 41.3 42 0.0014 25.9 4.9 35 68-106 94-128 (170)
27 4hhu_A OR280; engineered prote 37.7 42 0.0014 25.9 4.4 35 68-106 13-47 (170)
28 2k1o_A Putative; repressor, tr 33.0 46 0.0016 22.1 3.3 24 239-262 14-37 (66)
29 2kl8_A OR15; structural genomi 32.3 1.2E+02 0.004 20.7 5.4 35 68-106 12-46 (85)
30 3qoq_A Alginate and motility r 26.3 1.7E+02 0.0057 20.4 6.5 47 238-290 17-63 (69)
31 1p94_A Plasmid partition prote 24.7 1.7E+02 0.0057 20.8 5.5 42 237-284 31-72 (76)
32 2an7_A Protein PARD; bacterial 23.8 1.7E+02 0.0058 21.0 5.2 34 241-280 2-35 (83)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=1.5e-77 Score=609.91 Aligned_cols=417 Identities=28% Similarity=0.395 Sum_probs=340.8
Q ss_pred CCCCCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhh
Q 044173 1 MNSPAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLV 80 (455)
Q Consensus 1 ~~~~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~ 80 (455)
|.+++|+|+++++|+|+.+++ .+.++||+||+.++. .|++.++||+.+.. . ....+++||+||+++|+
T Consensus 3 m~~~~V~i~~~~~V~P~~~tp--~~~~~LS~lD~~~~~-~~~~~~~~y~~~~~---~------~~~~~~~Lk~sLs~~L~ 70 (439)
T 4g22_A 3 MGSMKIEVKESTMVRPAQETP--GRNLWNSNVDLVVPN-FHTPSVYFYRPTGS---S------NFFDAKVLKDALSRALV 70 (439)
T ss_dssp ---CCEEEEEEEEECCSSCCC--CCEECCCHHHHSCCT-TCCCEEEEECCCSC---T------TTTCHHHHHHHHHHHTT
T ss_pred CCceEEEEeeeEEEeCCCCCC--CCeecCChhHhCccc-cceeeEEEEcCCCC---c------cccHHHHHHHHHHHHHh
Confidence 889999999999999999985 478999999998765 69999999987542 1 11248999999999999
Q ss_pred hhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCc-ccccccCCCCCCCCCCCCCCeEEEE
Q 044173 81 HFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPL-VVQSFFDHDRALNHDGHSRPLLSIQ 159 (455)
Q Consensus 81 ~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~-~~~~l~p~~~~~~~~~~~~p~l~vq 159 (455)
+||+|||||+.+++ | +++|+| +++||.|+++++|.+++|+.... |. .+++|+|..+. .....+.|++.||
T Consensus 71 ~f~plAGRl~~~~~----g-~~~i~c-~~~Gv~fv~A~~d~~l~~l~~~~--p~~~~~~l~p~~~~-~~~~~~~pll~vQ 141 (439)
T 4g22_A 71 PFYPMAGRLKRDED----G-RIEIEC-NGEGVLFVEAESDGVVDDFGDFA--PTLELRRLIPAVDY-SQGISSYALLVLQ 141 (439)
T ss_dssp TTGGGGCEEEECTT----S-CEEEEC-CCCCEEEEEEEESSCGGGGTTCC--CCGGGGGGSCCCCT-TSCTTSSCSEEEE
T ss_pred hccccceeeeeCCC----C-CEEEEE-CCCCCEEEEEEcCCcHHHhcCCC--CCHHHHhcCCCCCc-ccccccCceeEEE
Confidence 99999999998765 6 899999 99999999999999999996432 32 45677764331 1112467999999
Q ss_pred EEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc-cCCCCcccccc---c
Q 044173 160 VTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKRWFPDGRDPIIN-LPFTHRDEFIR---R 234 (455)
Q Consensus 160 vt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr~~~~~~~~~~~-~p~~~~~~~~~---~ 234 (455)
||+| |||++||+++||.++||.|+.+|+++||+++| | .+.+..|.+||.++..++++.. .++.++..... .
T Consensus 142 vT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r--g--~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~ 217 (439)
T 4g22_A 142 VTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMAR--G--LDVTLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVS 217 (439)
T ss_dssp EEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHT--T--CCCSSCCBCCGGGGCCCSSCCCSSCCGGGSCCC-----
T ss_pred EEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhC--C--CCCCCCCccccccccCCCCCCCCcCcccccCCCCCccc
Confidence 9999 79999999999999999999999999999999 7 2345679999988766555431 11111211110 0
Q ss_pred -----CCC-CCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCC
Q 044173 235 -----YEA-PQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRL 308 (455)
Q Consensus 235 -----~~~-~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl 308 (455)
..+ .+++.++|+|++++|++||+++..+. +..++|++|+|+||+|+|++|||+.++++.+.+.++||+|+|+
T Consensus 218 ~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~--~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl 295 (439)
T 4g22_A 218 PQTAASDSVPETAVSIFKLTREQISALKAKSKEDG--NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARL 295 (439)
T ss_dssp ----------CEEEEEEEECHHHHHHHHHGGGGGG--CCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTS
T ss_pred ccccccCCcccceEEEEEECHHHHHHHHHHhhccC--CCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCC
Confidence 111 46789999999999999999998763 3467999999999999999999988778899999999999999
Q ss_pred CCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCccccccc---ccCCCeEEEe
Q 044173 309 EPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPFMYHLDR---LFDPFSIMMG 385 (455)
Q Consensus 309 ~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~s 385 (455)
+||+|++||||++..+.+.++++||.+.+|+++|.+||+++++++++++++.++.+...++...+.. .++..++++|
T Consensus 296 ~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vs 375 (439)
T 4g22_A 296 RPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGIT 375 (439)
T ss_dssp SSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEE
T ss_pred CCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEe
Confidence 9999999999999999999999999999999999999999999999999998864443433322211 1235689999
Q ss_pred cCCCCcccCCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhc
Q 044173 386 SSPRFNKYGNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEA 445 (455)
Q Consensus 386 sw~~~~~~~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~ 445 (455)
||.++++|++|||||+|+++++... ..+|.++++|.++++||++|.|+|++++|++|++
T Consensus 376 sw~r~~~y~~DFGwGkP~~~~~~~~-~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 376 SWVRLPIHDADFGWGRPIFMGPGGI-AYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp ECTTSCTTCCCCSSCCCSEEEESSC-CSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred ecCcCCccccccCCCCcceeecccc-CCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 9999999999999999999987643 4689999999987788999999999999999985
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=2.5e-71 Score=561.14 Aligned_cols=406 Identities=21% Similarity=0.294 Sum_probs=324.4
Q ss_pred CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhc
Q 044173 4 PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFY 83 (455)
Q Consensus 4 ~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 83 (455)
|.|+|+++++|+|+.+++.+.+.++||++|+..+. .|++.++||+.+.. .. ...+.++++||+||+++|++||
T Consensus 3 m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~-~~~~~~~~y~~~~~--~~----~~~~~~~~~Lk~sLs~~L~~~~ 75 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLT-CHIPFILFYPNPLD--SN----LDPAQTSQHLKQSLSKVLTHFY 75 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCS-SEEEEEEEECCCSS--CC----CCHHHHHHHHHHHHHHHTTTSG
T ss_pred ceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccc-cccceEEEEeCCCc--cc----cchhhHHHHHHHHHHHHhhhcc
Confidence 78999999999999998654578999999998654 79999999986542 00 0145679999999999999999
Q ss_pred CCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC--CCCCCCCeEEEEEE
Q 044173 84 PLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN--HDGHSRPLLSIQVT 161 (455)
Q Consensus 84 ~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~--~~~~~~p~l~vqvt 161 (455)
+|||||+. +++|+| +++||.|++++++.+++|+.+....+..++.|+|.....+ +...+.|++.+|||
T Consensus 76 plAGRl~~---------~~~i~c-~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt 145 (421)
T 2bgh_A 76 PLAGRINV---------NSSVDC-NDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKIS 145 (421)
T ss_dssp GGGSEEET---------TTEEEC-CCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEE
T ss_pred hhccccCC---------CcEEEE-cCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEE
Confidence 99999961 359999 9999999999999999999754222234567777652110 11346899999999
Q ss_pred Ee-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCCc-cCC-CC-CCCCcccCCCCcccccccCCC
Q 044173 162 EL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVKR-WFP-DG-RDPIINLPFTHRDEFIRRYEA 237 (455)
Q Consensus 162 ~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~dr-~~~-~~-~~~~~~~p~~~~~~~~~~~~~ 237 (455)
+| |||++||+++||.++||.|+.+|+++||+++| |. ... ..|.+|| ..+ +. ++.+. + . ....
T Consensus 146 ~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r--g~-~~~-~~P~~dr~~~l~p~~~~~~~--~-----~---~~~~ 211 (421)
T 2bgh_A 146 FFECGGTAIGVNLSHKIADVLSLATFLNAWTATCR--GE-TEI-VLPNFDLAARHFPPVDNTPS--P-----E---LVPD 211 (421)
T ss_dssp ECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHT--TC-SCC-CCCBCSHHHHHSCCCTTCCC--C-----C---CCCC
T ss_pred EEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhc--CC-CCC-CCCccccccccCCCcccCCC--C-----c---cCCc
Confidence 99 79999999999999999999999999999999 62 222 5788888 422 11 12111 1 1 1124
Q ss_pred CCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCC--CCCCceEEEEeecCCCCCCCCCCCC
Q 044173 238 PQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNL--PPDQTTSCRMAADNRPRLEPPLPRE 315 (455)
Q Consensus 238 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~--~~~~~~~~~~~vd~R~rl~p~lp~~ 315 (455)
.+.+.++|+|++++|++||+++.++. ...++|++|+|+||+|+|+++||+. .+++.+.+.++||+|+|++||+|++
T Consensus 212 ~~~~~~~f~f~~~~i~~LK~~a~~~~--~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~ 289 (421)
T 2bgh_A 212 ENVVMKRFVFDKEKIGALRAQASSAS--EEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHY 289 (421)
T ss_dssp SSEEEEEEEECHHHHHHHHHHTC-------CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTT
T ss_pred cceEEEEEEECHHHHHHHHHHhhccC--CCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCC
Confidence 56889999999999999999987652 2357999999999999999999864 2466899999999999999999999
Q ss_pred CcccccccccceeeccccccCcHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCcccccccccCCCeEEEecCCCCcccCC
Q 044173 316 YFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKAVREWLDAWWKSPFMYHLDRLFDPFSIMMGSSPRFNKYGN 395 (455)
Q Consensus 316 Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~~~~ 395 (455)
||||++..+.+..++++ +.+|+.+|..||++++++++++++...+ +.+. ....+ ....+++|||.++++|++
T Consensus 290 y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~-~~~~--~~~~~---~~~~~~vssw~~~~~y~~ 361 (421)
T 2bgh_A 290 AMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLK-GMTC--LYELE---PQELLSFTSWCRLGFYDL 361 (421)
T ss_dssp BCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHH-HHHH--HHTSC---GGGEEEEEEETTSCGGGC
T ss_pred ccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--hhccC---CCCeEEEeccccCCCccc
Confidence 99999999999888876 7899999999999999998888886543 3221 00111 124699999999999999
Q ss_pred CCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcCcchhhhcc
Q 044173 396 EFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEADEEFMEVTS 454 (455)
Q Consensus 396 DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d~~~~~~~~ 454 (455)
|||||+|++++++.. ..+|.++++|++++ +|++|.|+|++++|++|++ +|.+|++
T Consensus 362 DFGwGkP~~v~~~~~-~~~g~~~~~p~~~~-~gi~v~v~L~~~~m~~f~~--e~~~~~~ 416 (421)
T 2bgh_A 362 DFGWGKPLSACTTTF-PKRNAALLMDTRSG-DGVEAWLPMAEDEMAMLPV--ELLSLVD 416 (421)
T ss_dssp CSSSCCCSEEECCCC-CSTTEEEEEECTTS-SSEEEEEEEEHHHHHHSCH--HHHTTBC
T ss_pred ccCCCccCeeccccc-CcCCEEEEEecCCC-CeEEEEEEcCHHHHHHHHH--HHHHhhc
Confidence 999999999987653 36799999999876 5899999999999999999 9999986
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=9.1e-71 Score=562.88 Aligned_cols=418 Identities=23% Similarity=0.337 Sum_probs=326.7
Q ss_pred eEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCC
Q 044173 6 VQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPL 85 (455)
Q Consensus 6 v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 85 (455)
|+|+++++|+|+.++++ .+.++||++|+.+....|++.++||+.+.. . ..+.++++++||+||+++|++||+|
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~---~---~~~~~~~~~~Lk~sLs~~L~~~~pl 74 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPIS---R---PDFVQTIIPTLKDSLSLTLKYYLPL 74 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCC---S---HHHHHTHHHHHHHHHHHHHTTSGGG
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCC---C---chhHHHHHHHHHHHHHHHhhhcccc
Confidence 89999999999987533 588999999998665569999999987642 1 1224567999999999999999999
Q ss_pred CceEeecCCCCCCcceEEEEecC-CCCceEEEEecccchhhhcCCCCCC-cccccccCCCCCCCC--CCCCCCeEEEEEE
Q 044173 86 AGRLVTRQTDSPPSYVVFVDCNN-SPGAKFIHASLDMAISDILSPTYVP-LVVQSFFDHDRALNH--DGHSRPLLSIQVT 161 (455)
Q Consensus 86 aGrl~~~~~~~~~g~~l~i~~~~-~~gv~f~~~~~~~~l~~l~~~~~~p-~~~~~l~p~~~~~~~--~~~~~p~l~vqvt 161 (455)
||||+.+++.+ | +++|+| + ++||.|++++++.+++++......| ..++.|+|..+..+. ...+.|++.+|||
T Consensus 75 AGRl~~~~~~~--g-~~~i~c-~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT 150 (453)
T 2xr7_A 75 AGNVACPQDWS--G-YPELRY-VTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVT 150 (453)
T ss_dssp GSCCEEESSTT--C-CCEEEE-ETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEE
T ss_pred CeeEEccCCCC--C-CEEEEe-cCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEE
Confidence 99999876212 6 899999 6 6999999999999999996432222 245567665331110 0012799999999
Q ss_pred Ee-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCC---CCCCCCCCCccCCCCCCCCcccCCCCccc--cc-cc
Q 044173 162 EL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMD---SISRPPVVKRWFPDGRDPIINLPFTHRDE--FI-RR 234 (455)
Q Consensus 162 ~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~---~~~~~P~~dr~~~~~~~~~~~~p~~~~~~--~~-~~ 234 (455)
+| |||++||+++||.++||.|+.+|+++||+++|. |... +....|.+||..+.............+.. .. ..
T Consensus 151 ~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~-G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~ 229 (453)
T 2xr7_A 151 LFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKF-GGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKM 229 (453)
T ss_dssp EETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHT-TTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCC
T ss_pred EccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhc-CCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCcccc
Confidence 99 799999999999999999999999999999994 3111 23346889997664211000000011100 00 00
Q ss_pred ---CCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCC-----CCCCceEEEEeecCCC
Q 044173 235 ---YEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNL-----PPDQTTSCRMAADNRP 306 (455)
Q Consensus 235 ---~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~-----~~~~~~~~~~~vd~R~ 306 (455)
..+.+.+.++|+|++++|++||+++.++. ....++|++|+|+||+|+|+++||.. ++++.+.+.++||+|+
T Consensus 230 ~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~-~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~ 308 (453)
T 2xr7_A 230 SDVVTPPDKVRGTFIITRHDIGKLKNLVLTRR-PKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRA 308 (453)
T ss_dssp SCCCCCCSCCCEEEEECHHHHHHHHHHHHHHS-CCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTS
T ss_pred ccccCCCCceEEEEEECHHHHHHHHHHHhhcC-CCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccc
Confidence 02346778999999999999999998763 12258999999999999999999964 5677899999999999
Q ss_pred CCCCCCCCCCcccccccccceeecccccc-CcHHHHHHHHHHHHHh--cChH-HHHHHHHHHhcCCcccccccccCCCeE
Q 044173 307 RLEPPLPREYFGNSINPLRGVTTVGELLG-HDLGWAAWKLHQTVVN--QTDK-AVREWLDAWWKSPFMYHLDRLFDPFSI 382 (455)
Q Consensus 307 rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~iR~ai~~--~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (455)
|++||+|++||||++..+.+.++++||.+ .+|+.+|..||+++++ ++++ ++++ .|.+.... + +....+
T Consensus 309 rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~---~~~~~~~~--~---~~~~~~ 380 (453)
T 2xr7_A 309 QFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG---SWFKEYDK--V---DAKRSL 380 (453)
T ss_dssp CSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS---CTTSCCCC--S---CGGGEE
T ss_pred cCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh---HHHHHHHh--h---ccCCcE
Confidence 99999999999999999999999999995 8999999999999999 5777 7876 44442111 1 223589
Q ss_pred EEecCCCCcccCCCCCCCceeEEeeCCCCCCCc--eEEEeccCCCCCcEEEEEEcCHHHHHHhhc
Q 044173 383 MMGSSPRFNKYGNEFGLGQAVALRSGYAHKFDG--KVSAYPGHEGGGSIDLEICLPPHSMTALEA 445 (455)
Q Consensus 383 ~~ssw~~~~~~~~DFG~G~P~~v~~~~~~~~~g--~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~ 445 (455)
.+|||+++++|++|||||+|+++++.... .+| .++++|+++++||++|.++|++++|++|++
T Consensus 381 ~vssw~~~~~y~~DFG~G~P~~v~~~~~~-~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 381 SVAGSPKLDLYAADFGWGRPEKLEFVSID-NDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp EECSCSSCCGGGCCCSSCSCSEEEEGGGS-SCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred EEeccccCCccccccCCCcceEEEeeeec-CCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 99999999999999999999999976533 578 888889888888999999999999999953
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.7e-71 Score=566.76 Aligned_cols=419 Identities=22% Similarity=0.369 Sum_probs=322.3
Q ss_pred CCC-CCeEEEEeeEeeCCCCCCCCCcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhh
Q 044173 1 MNS-PAVQYMSECFVQPEYFSEEMKQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTL 79 (455)
Q Consensus 1 ~~~-~~v~v~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L 79 (455)
|.| ..|+|+++++|+|+.++++ .+.++||++|+.+....|++.++||+.+.. ...+.++++++||+||+++|
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~------~~~~~~~~~~~Lk~sLs~~L 73 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPIT------RSQFTETVVPNIKHSLSITL 73 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCC------HHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCC------cchhhHHHHHHHHHHHHHHh
Confidence 777 8999999999999987533 689999999998655569999999987642 01224457999999999999
Q ss_pred hhhcCCCceEe-ecCCCCCCcceEEEEecC-CCCceEEEEecccchhhhcCCCCCC-cccccccCCCCCCC--CCCCCCC
Q 044173 80 VHFYPLAGRLV-TRQTDSPPSYVVFVDCNN-SPGAKFIHASLDMAISDILSPTYVP-LVVQSFFDHDRALN--HDGHSRP 154 (455)
Q Consensus 80 ~~~p~LaGrl~-~~~~~~~~g~~l~i~~~~-~~gv~f~~~~~~~~l~~l~~~~~~p-~~~~~l~p~~~~~~--~~~~~~p 154 (455)
++||+|||||+ .++.+ | +++|+| + ++||.|++++++.+++++......| ..++.|+|..+... ....+.|
T Consensus 74 ~~~~plAGRl~~~~~~~---g-~~~i~c-~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~p 148 (454)
T 2e1v_A 74 KHFYPFVGKLVVYPAPT---K-KPEICY-VEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIP 148 (454)
T ss_dssp TTCGGGGSEEEECSSSS---S-CCEEEE-CTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEE
T ss_pred hhccccceeeeeccCCC---C-CEEEEE-CCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCc
Confidence 99999999998 65322 6 899999 6 5999999999999999986432212 24556776543211 1112359
Q ss_pred eEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhcCCC-C---CCCCCCCCCccCCCCCCCCcccCCC-Cc
Q 044173 155 LLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKM-D---SISRPPVVKRWFPDGRDPIINLPFT-HR 228 (455)
Q Consensus 155 ~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~-~---~~~~~P~~dr~~~~~~~~~~~~p~~-~~ 228 (455)
++.+|||+| |||++||+++||.++||.|+.+|+++||+++|. |.. . ++...|.+|| ++. +++...++. .+
T Consensus 149 ll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~-g~~~~~~~~~~~~P~~dr-~l~--~p~~~~~~~~~~ 224 (454)
T 2e1v_A 149 LFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARS-GNNDESFLANGTRPLYDR-IIK--YPMLDEAYLKRA 224 (454)
T ss_dssp CEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHT-TSCCHHHHHHSCCCBCCC-CCC--CHHHHHHHHHHT
T ss_pred eEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhcc-CCCccccCCCCCCCcccc-cCC--CCCcchHHHHhh
Confidence 999999999 799999999999999999999999999999994 311 1 2245789999 654 222110000 00
Q ss_pred -c-cc-----cccC-CCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEE
Q 044173 229 -D-EF-----IRRY-EAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRM 300 (455)
Q Consensus 229 -~-~~-----~~~~-~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~ 300 (455)
. .. .... .+.+.+.++|+|++++|++||+++.++. ....++|++|+|+||+|+|++||| +++.+.+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~-~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~ 300 (454)
T 2e1v_A 225 KVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQL-PTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGF 300 (454)
T ss_dssp TCTTHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHC-TTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEE
T ss_pred hccccccccCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcC-CCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEE
Confidence 0 00 0000 2346779999999999999999998763 122579999999999999999999 567899999
Q ss_pred eecCCCCCCCCCCCCCcccccccccceeecccccc-CcHHHHHHHHHHHHHhcChHHHHHHH----HHHhcCCccccccc
Q 044173 301 AADNRPRLEPPLPREYFGNSINPLRGVTTVGELLG-HDLGWAAWKLHQTVVNQTDKAVREWL----DAWWKSPFMYHLDR 375 (455)
Q Consensus 301 ~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~iR~ai~~~~~~~v~~~~----~~~~~~~~~~~~~~ 375 (455)
+||+|+|++||+|++||||++..+.+.++++||.+ .+|+.+|..||+++++++.+|+.+.+ ..|.+. .+.
T Consensus 301 ~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~-----~~~ 375 (454)
T 2e1v_A 301 PIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDL-----VSE 375 (454)
T ss_dssp EEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHH-----HHH
T ss_pred EecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH-----HHh
Confidence 99999999999999999999999999999999995 89999999999999998755544422 122221 111
Q ss_pred ccCCCeEEEecCCCCcccCCCCCCCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhc
Q 044173 376 LFDPFSIMMGSSPRFNKYGNEFGLGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEA 445 (455)
Q Consensus 376 ~~~~~~~~~ssw~~~~~~~~DFG~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~ 445 (455)
.+....+.+|||+++++|++|||||+|+++++.... .+|.++++|+++++||++|.++|++++|++|++
T Consensus 376 ~~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~-~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 376 GMPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSID-HNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp CCCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGGG-GSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred hcCCceEEEecCCCCCcccccccCccceEEEeeeeC-CCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 123348999999999999999999999999976533 578999999988889999999999999999953
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.6e-65 Score=522.50 Aligned_cols=410 Identities=17% Similarity=0.199 Sum_probs=310.4
Q ss_pred ceeCCcccccc--ccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCC-CCcceE
Q 044173 26 PCYLTPWDLVM--LSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDS-PPSYVV 102 (455)
Q Consensus 26 ~~~Ls~lD~~~--~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~-~~g~~l 102 (455)
.++||++||.+ +. .|++.++||+.+.. ...++++++||+||+++|++||+|||||+.++..+ ..| ++
T Consensus 4 ~~~Ls~lD~~~~~~~-~y~~~~~~y~~~~~--------~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g-~~ 73 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLS-IYTQISLLYPVSDS--------SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTG-TS 73 (451)
T ss_dssp CEECCGGGGCTTGGG-CEEEEEEEEECSCG--------GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCC-EE
T ss_pred cccCChhhcCccccc-cceeEEEEEECCCC--------CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCC-cE
Confidence 47999999986 44 69999999986431 01466899999999999999999999999875310 016 89
Q ss_pred EEEecCCCCceEEEEeccc-----chhhhcCCCCCCc-ccc--cccCCCCCC-C---CCCCCCCeEEEEEEEeeCeEEEE
Q 044173 103 FVDCNNSPGAKFIHASLDM-----AISDILSPTYVPL-VVQ--SFFDHDRAL-N---HDGHSRPLLSIQVTELVDGIFIG 170 (455)
Q Consensus 103 ~i~~~~~~gv~f~~~~~~~-----~l~~l~~~~~~p~-~~~--~l~p~~~~~-~---~~~~~~p~l~vqvt~~~gG~~lg 170 (455)
+|.| ++.+..|++++++. +++++.+. ..|. .++ .+.|..... . ....+.|++.+|||+||||++||
T Consensus 74 ~i~~-~~~~~~~~va~~~~d~~~p~~~~l~~~-~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg 151 (451)
T 2rkv_A 74 FIVP-FEDVPRVVVKDLRDDPSAPTIEGMRKA-GYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILT 151 (451)
T ss_dssp EEEC-CCSSCEEEEEECTTCTTSCBHHHHHHH-TSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEE
T ss_pred EEee-cCCCCeEEEEeCCCCCCCCCHHHHHHc-CCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeee
Confidence 9998 66666688887764 67777532 2232 122 233432110 0 12235899999999889999999
Q ss_pred eecccccccchhHHHHHHHHHHHHHhcCCCCCCC----CCCCCCccCCCC-C--CCCc-ccCCCCcccccc----cCCCC
Q 044173 171 CSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSIS----RPPVVKRWFPDG-R--DPII-NLPFTHRDEFIR----RYEAP 238 (455)
Q Consensus 171 ~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~----~~P~~dr~~~~~-~--~~~~-~~p~~~~~~~~~----~~~~~ 238 (455)
+++||.++||.|+.+|+++||++|| |. +.. ..|.+||..+.. . .+|. ..+...+..... .....
T Consensus 152 ~~~~H~v~Dg~g~~~Fl~awa~~~r--g~--~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (451)
T 2rkv_A 152 VNGQHGAMDMVGQDAVIRLLSKACR--ND--PFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPV 227 (451)
T ss_dssp EEEETTTCCHHHHHHHHHHHHHHHH--TC--CCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------C
T ss_pred eeehhccccHHHHHHHHHHHHHHhc--CC--CCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCC
Confidence 9999999999999999999999999 72 221 147778763221 1 1111 111111211110 01234
Q ss_pred CceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhc-C-CCCCCceEEEEeecCCCCCCCCCCCCC
Q 044173 239 QLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTR-N-LPPDQTTSCRMAADNRPRLEPPLPREY 316 (455)
Q Consensus 239 ~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar-~-~~~~~~~~~~~~vd~R~rl~p~lp~~Y 316 (455)
+++.++|+|++++|++||+++.+++.....++|++|+|+||+|+|++||| . .++++.+.+.++||+|+|++ +|.+|
T Consensus 228 ~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y 305 (451)
T 2rkv_A 228 SASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNY 305 (451)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTC
T ss_pred CceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCC
Confidence 57899999999999999999987642224679999999999999999998 3 45678899999999999997 89999
Q ss_pred cccccccccceeeccccccCcHHHHHHHHHHHHHhcChHH-HHHHHHHHhcCCccccc--cc-ccCCCeEEEecCCCCcc
Q 044173 317 FGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQTDKA-VREWLDAWWKSPFMYHL--DR-LFDPFSIMMGSSPRFNK 392 (455)
Q Consensus 317 ~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~~~~-v~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ssw~~~~~ 392 (455)
|||++..+.+..+++||.+.+|+.+|.+||+++.+++.++ +++.++.+....+...+ +. ...+.++++|||+++++
T Consensus 306 ~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~ 385 (451)
T 2rkv_A 306 PGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGL 385 (451)
T ss_dssp CSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCG
T ss_pred cccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCc
Confidence 9999999999999999999999999999999999998777 88887655543332222 11 11345799999999999
Q ss_pred cCCCCC--CCceeEEeeCCCCCCCceEEEeccCCCCCcEEEEEEcCHHHHHHhhcCcchhhhcc
Q 044173 393 YGNEFG--LGQAVALRSGYAHKFDGKVSAYPGHEGGGSIDLEICLPPHSMTALEADEEFMEVTS 454 (455)
Q Consensus 393 ~~~DFG--~G~P~~v~~~~~~~~~g~~~i~p~~~~~g~~~v~v~L~~~~m~~l~~d~~~~~~~~ 454 (455)
|++||| ||+|++++.+...+.+|.++++|.. ++||++|.++|++++|++|++|++|++|++
T Consensus 386 y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~ 448 (451)
T 2rkv_A 386 WDYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKYAQ 448 (451)
T ss_dssp GGCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTTCE
T ss_pred cccccCCCCCCceEEEcCCccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhhhe
Confidence 999998 7999999866433467999999864 468999999999999999999999999985
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.08 E-value=3.2e-08 Score=98.84 Aligned_cols=285 Identities=14% Similarity=0.072 Sum_probs=160.8
Q ss_pred CcceeCCccccccccccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEE
Q 044173 24 KQPCYLTPWDLVMLSVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVF 103 (455)
Q Consensus 24 ~~~~~Ls~lD~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~ 103 (455)
...+|||++++.+.... ....+.|..... .+ .++|++||..++..+|.|-.++....+ + .++
T Consensus 5 ~~~~pls~~Q~~~~~~~-y~~~~~~~l~g~----------ld--~~~l~~A~~~lv~rh~~LRt~f~~~~~----~-~~q 66 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYE-VFTSMTIQLRGV----------ID--VDALSDAFDALLETHPVLASHLEQSSD----G-GWN 66 (422)
T ss_dssp SEEEECCHHHHHHHHTT-CEEEEEEEEESC----------CC--HHHHHHHHHHHHHHCGGGSEEEEECTT----S-SEE
T ss_pred ceeecCCHHHHHHHhcC-ceEEEEEEEecC----------CC--HHHHHHHHHHHHHhCccceEEEEecCC----c-cee
Confidence 46799999988654222 223444444431 22 789999999999999999999986543 3 344
Q ss_pred EEecCCCCce-EEEEecccchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEee-CeEEEEeecccccccch
Q 044173 104 VDCNNSPGAK-FIHASLDMAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELV-DGIFIGCSMNHVLGDGT 181 (455)
Q Consensus 104 i~~~~~~gv~-f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~-gG~~lg~~~~H~v~Dg~ 181 (455)
+.. ...... +.+.. +.+... ...+.+ .. .+.+ ...|++++.+.. . ++..|.+.+||.++||.
T Consensus 67 ~v~-~~~~~~~~~~~d----~~~~~~----~~~~~~---~~--~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~ 130 (422)
T 1q9j_A 67 LVA-DDLLHSGICVID----GTAATN----GSPSGN---AE--LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGH 130 (422)
T ss_dssp EEE-CCSSSCCCEEEC-----------------------CC--CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHH
T ss_pred eec-cCCCCCceEEEE----CCCCCc----chhhhc---cc--CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchh
Confidence 444 222222 22211 111100 000100 00 1233 457898888877 5 56999999999999999
Q ss_pred hHHHHHHHHHHHHHhc---CCCCCCCCCCCCC--cc------CCCC-CCC-Cc-ccCCCC--cc-c--cc---ccCCCCC
Q 044173 182 SFWNFFNAFSEIFQAQ---GKMDSISRPPVVK--RW------FPDG-RDP-II-NLPFTH--RD-E--FI---RRYEAPQ 239 (455)
Q Consensus 182 g~~~fl~~wa~~~r~~---G~~~~~~~~P~~d--r~------~~~~-~~~-~~-~~p~~~--~~-~--~~---~~~~~~~ 239 (455)
++..|++.|.+.++.. |...+....++.+ .+ .... ... .. ...+.. .. . .+ +......
T Consensus 131 S~~~l~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~ 210 (422)
T 1q9j_A 131 HGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQA 210 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCC
T ss_pred hHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCC
Confidence 9999999999998742 2111111112111 01 0000 000 00 000100 00 0 00 0011122
Q ss_pred ceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCccc
Q 044173 240 LLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGN 319 (455)
Q Consensus 240 ~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN 319 (455)
.....+.++.+..++|++.|... .+|.++++.|.+...+.|-+. .......+.++++.|....|+++..=+.|
T Consensus 211 ~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~~~~~~~ 283 (422)
T 1q9j_A 211 VPVTRLWLSKQQTSDLMAFGREH------RLSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVAPTEATN 283 (422)
T ss_dssp CCEEEECCCHHHHHHHHHHHTTT------TCCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCCTTTBSC
T ss_pred ccceEEEeCHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCChhhhhh
Confidence 35678889999999999998765 689999999987777665421 23456788999999998765543122334
Q ss_pred ccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 320 SINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 320 ~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
.+++....+++. .+.++.+++..+++.+.+
T Consensus 284 ~vG~f~n~lp~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 284 LLGAASYLAEIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp CEEEEEEEECCC--SSCCHHHHHHHHHHHHHH
T ss_pred hheeeeeeeecc--CCCCHHHHHHHHHHHHHH
Confidence 333333333332 134677777777777654
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.65 E-value=5.8e-06 Score=84.95 Aligned_cols=246 Identities=13% Similarity=0.096 Sum_probs=146.6
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecccchhhhcCCCCCCcccccccCCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLDMAISDILSPTYVPLVVQSFFDHDRALN 147 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~~~l~~l~~~~~~p~~~~~l~p~~~~~~ 147 (455)
.++|++++..++..+|.|--++....+ + -.++.. ....+.+..... +-+++.. +.+... . +
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~~----~-~~q~v~-~~~~~~~~~~~~--~~~~~~~-------~~~~~~--~--~ 193 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVNG----E-PVQNIH-EDVPFALAYSEV--TEEEARE-------LVSSLV--Q--P 193 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEETT----E-EEEEEC-SCCCCCCEEEEC--CHHHHHH-------HHHHTC--C--C
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeCC----E-EEEEEC-CCCCCceEEEeC--CHHHHHH-------HHHHhc--C--C
Confidence 789999999999999999999986432 2 233333 222233322211 1111110 000000 0 1
Q ss_pred CCCCCCCeEEEEEEEee-CeEEEEeecccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCC-----ccCCC------
Q 044173 148 HDGHSRPLLSIQVTELV-DGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVK-----RWFPD------ 215 (455)
Q Consensus 148 ~~~~~~p~l~vqvt~~~-gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~d-----r~~~~------ 215 (455)
++-...|++++.+.... +...|.+.+||.++||.++..|++.+.+.++ |...+....++.+ +....
T Consensus 194 fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~--~~~l~~~~~~~~d~~~~~~~~~~~~~~~~ 271 (520)
T 2jgp_A 194 FDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQ--GDVLPELRIQYKDFAVWQQEFSQSAAFHK 271 (520)
T ss_dssp CCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHT--TCCCCCCSCCHHHHHHHHHHHTTSHHHHH
T ss_pred CCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHc--cCCCCCCCCCHHHHHHHHHHhhcChhhHH
Confidence 12234689888887774 6789999999999999999999999999998 5211111111101 00000
Q ss_pred ----------CCCCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHH
Q 044173 216 ----------GRDPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSIT 285 (455)
Q Consensus 216 ----------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~ 285 (455)
...+...+|..... +...........+.++.+..++|++.+... .+|.+.++.|.+-..+.
T Consensus 272 ~~~yW~~~l~~~~~~~~lp~~~~~---~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~T~~~~l~aa~a~~L~ 342 (520)
T 2jgp_A 272 QEAYWLQTFADDIPVLNLPTDFTR---PSTQSFAGDQCTIGAGKALTEGLHQLAQAT------GTTLYMVLLAAYNVLLA 342 (520)
T ss_dssp HHHHHHHHTSSCCCCCCCCCSSCC---CSSCCCBEEEEEEECCHHHHHHHHHHHHHH------TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcCCCCCCCCC---CCCCCCCccEEEEeCCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHH
Confidence 00000111110000 000112234677889999999999999876 58999999998766665
Q ss_pred hhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 286 RTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 286 ~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
+--+ .....+.+++++|..-+ -++-+|+.+......+.+. .+.++.+++..+++.+.+
T Consensus 343 ~~~~---~~dv~~g~~~~gR~~~~---~~~~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 343 KYAG---QEDIIVGTPITGRSHAD---LEPIVGMFVNTLAMRNKPQ--REKTFSEFLQEVKQNALD 400 (520)
T ss_dssp HHHT---CSCEEEEEEECCCCSGG---GTTCCSCCCEEEEEEECCC--TTSBHHHHHHHHHHHHHH
T ss_pred HhcC---CCCeEEEeccCCCCchh---hhccEEeeeeeeeEEecCC--CCCCHHHHHHHHHHHHHH
Confidence 5543 34678999999997522 2466777776655555443 245677777777776644
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.45 E-value=4.2e-06 Score=85.43 Aligned_cols=283 Identities=10% Similarity=-0.014 Sum_probs=157.2
Q ss_pred CcceeCCccccccc-------cccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCC
Q 044173 24 KQPCYLTPWDLVML-------SVQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDS 96 (455)
Q Consensus 24 ~~~~~Ls~lD~~~~-------~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~ 96 (455)
...+|||+.-+-+. ... ....+.|..... .+ .++|++|+..++..+|.|--++....
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g~----------ld--~~~L~~A~~~lv~rh~~LRt~f~~~~--- 74 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSGR----------ID--DDRLAAAADEVLDAFPLLRVNFVDDD--- 74 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEESS----------CC--HHHHHHHHHHHHHHCGGGGEEEEESS---
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeCC----------CC--HHHHHHHHHHHHHhchhceeEEEccC---
Confidence 47799998876321 111 223445554432 23 78999999999999999999998643
Q ss_pred CCcceEEEEecCCCCceEEEEeccc-ch--hhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEee-CeEEEEee
Q 044173 97 PPSYVVFVDCNNSPGAKFIHASLDM-AI--SDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELV-DGIFIGCS 172 (455)
Q Consensus 97 ~~g~~l~i~~~~~~gv~f~~~~~~~-~l--~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~-gG~~lg~~ 172 (455)
| ...+.. ... +.+.+..... .- +++. ..+.+... ..++-...|++++.+.... +...|.+.
T Consensus 75 --~-~~~~v~-~~~-~~~~~~d~~~~~~~~~~~~------~~~~~~~~----~~fdl~~~pl~r~~l~~~~~~~~~l~l~ 139 (493)
T 4hvm_A 75 --G-LWMRTR-ENA-DALVRSDLRGHPDPQARCV------ELLRADRD----RPTDPERDPLVRLHLVRLSETDVVLGVV 139 (493)
T ss_dssp --S-EEEEEC-SCC-CCEEEEECTTSSSHHHHHH------HHHHHHHS----SCCCTTTSCSEEEEEEECSSSEEEEEEE
T ss_pred --C-EEEEec-CCC-CCceEEECCCCCchHHHHH------HHHHHHhc----CCCCCCCCCeEEEEEEEECCCcEEEEEe
Confidence 3 333222 333 5554432210 00 0110 00111110 0112234699988888874 56899999
Q ss_pred cccccccchhHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccCCC--CCCCCc---ccCCC-----Ccccccc-cCCCCC
Q 044173 173 MNHVLGDGTSFWNFFNAFSEIFQAQGKMDSISRPPVVK--RWFPD--GRDPII---NLPFT-----HRDEFIR-RYEAPQ 239 (455)
Q Consensus 173 ~~H~v~Dg~g~~~fl~~wa~~~r~~G~~~~~~~~P~~d--r~~~~--~~~~~~---~~p~~-----~~~~~~~-~~~~~~ 239 (455)
+||.++||.++..|++.+.+.+. |. .++ .++.+ .+... ...... ...+. ....... +.....
T Consensus 140 ~HH~i~Dg~S~~~l~~~l~~~Y~--g~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~ 214 (493)
T 4hvm_A 140 AHQMLLDARSRYMVLGAVWQAYY--GR-FRP--AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGP 214 (493)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHT--TC-CCG--GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------C
T ss_pred cchhhccHHHHHHHHHHHHHHhC--CC-CCC--cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCC
Confidence 99999999999999999999996 72 221 22111 11000 000000 00000 0000000 001112
Q ss_pred ceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcC--HHHHHHHHHHHHHHhhcCC--------CCCCceEEEEeecCCCCCC
Q 044173 240 LLERIFHFTGESIARLKAKANAEAGNNTNKIS--SFQALSALVWRSITRTRNL--------PPDQTTSCRMAADNRPRLE 309 (455)
Q Consensus 240 ~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~S--t~d~l~A~lW~~i~~ar~~--------~~~~~~~~~~~vd~R~rl~ 309 (455)
.....+.++.+..++|++.|... .+| .+.++.|.+-..+.+-+.. .......+.+++++|..-
T Consensus 215 ~~~~~~~l~~~~~~~l~~~a~~~------~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~- 287 (493)
T 4hvm_A 215 PETSRLRVPGSRWQALTEPGGPL------GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL- 287 (493)
T ss_dssp CEEEEEEEEHHHHHHHHCC------------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT-
T ss_pred CeeEEEEcCHHHHHHHHHHHHHc------CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc-
Confidence 56678899999999999887765 588 9999999876665554110 223567889999999662
Q ss_pred CCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 310 PPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 310 p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
--++.+|+++......+..+...+.++.+++..+++.+.+
T Consensus 288 --~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 288 --QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp --TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred --chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 2356678877766666655432246777777777766643
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.43 E-value=9.5e-06 Score=81.21 Aligned_cols=240 Identities=16% Similarity=0.087 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecc-c-----chhhhcCCCCCCcccccccC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLD-M-----AISDILSPTYVPLVVQSFFD 141 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~-~-----~l~~l~~~~~~p~~~~~l~p 141 (455)
.++|++++..++..+|.|--++... + | .|.. ...+.+.+.... . .+.++ +.+...
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~-~----~---~v~~--~~~~~~~~~d~~~~~~~~~~~~~~---------~~~~~~ 95 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ-G----E---LYWH--PFSPPIDYQDLSIHLEAEPLAWRQ---------IEQDLQ 95 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT-C----C---EEEC--SSCCCCEEEECTTCTTHHHHHHHH---------HHHHHT
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec-C----C---eECC--CcCCCccEEeCCCCCCHHHHHHHH---------HHHHhc
Confidence 7899999999999999999888742 1 3 3332 222222221111 0 01111 111100
Q ss_pred CCCCCCCCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCCCCCC-----ccC
Q 044173 142 HDRALNHDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPPVVK-----RWF 213 (455)
Q Consensus 142 ~~~~~~~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P~~d-----r~~ 213 (455)
.+++-...|++++.+... .+...|.+.+||.++||.++..|++.+.+.+... |...+....++.+ +..
T Consensus 96 ----~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~ 171 (436)
T 1l5a_A 96 ----RSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAY 171 (436)
T ss_dssp ----SCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHH
T ss_pred ----CCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHh
Confidence 011223468888888777 4679999999999999999999999999998742 4111111111100 000
Q ss_pred CCC----------------CCCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHH
Q 044173 214 PDG----------------RDPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALS 277 (455)
Q Consensus 214 ~~~----------------~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~ 277 (455)
... ..++..+|.. ............+.++.+..++|++.+... .+|.+.++.
T Consensus 172 ~~~~~~~~~~~~W~~~l~~~~~~~~lp~~------~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~------~~t~~~~l~ 239 (436)
T 1l5a_A 172 LTSHRYWQDKQFWQGYLREAPDLTLTSAT------YDPQLSHAVSLSYTLNSQLNHLLLKLANAN------QIGWPDALV 239 (436)
T ss_dssp HTSHHHHHHHHHHHHHHHTSCCCCBCCTT------CCGGGCCEEEEEEECCHHHHHHHHHHHHHT------TCCHHHHHH
T ss_pred hccHhHHHHHHHHHHHhcCCCCcccCCCC------CCCCcccceeeEEecCHHHHHHHHHHHHHh------CCCHHHHHH
Confidence 000 0000011100 000112234677899999999999999876 689999999
Q ss_pred HHHHHHHHhhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 278 ALVWRSITRTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 278 A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
|.+-..+.+-- . ....+.+++++|..- --++-+|+.+......+... .+.++.+++..+++.+.+
T Consensus 240 aa~~~~L~~~~---g-~dv~ig~~~~~R~~~---~~~~~vG~f~n~lplr~~~~--~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 240 ALCALYLESAE---P-DAPWLWLPFMNRWGS---VAANVPGLMVNSLPLLRLSA--QQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHHHHHHHS---T-TCCEEEEEECCCTTS---GGGGSCSCCCEEEEEECCCC--TTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh---C-CceEEeeecccCCCh---HHhcCcceEEEEEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 98766555543 2 467899999999652 12455677666555554433 245677777777776654
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.35 E-value=9.4e-05 Score=74.57 Aligned_cols=290 Identities=11% Similarity=0.109 Sum_probs=164.2
Q ss_pred CcceeCCcccccccc-----ccccceEEEecCCCCCCCCCcchhhHHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCC
Q 044173 24 KQPCYLTPWDLVMLS-----VQYIQKGLLFRKPAIPPASVDQVDFIKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPP 98 (455)
Q Consensus 24 ~~~~~Ls~lD~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~ 98 (455)
...+|||+..+.+.. .......+.|..... .+ .+.|+++|..++..+|.|--++.....
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~----------ld--~~~L~~Al~~lv~rh~~LRt~f~~~~~---- 78 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG----------FD--PKVIQSVMDKIIEHHDALRMVYQHENG---- 78 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC----------CC--HHHHHHHHHHHHHHSGGGGEEEECGGG----
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC----------CC--HHHHHHHHHHHHHhChHhheEEecCCC----
Confidence 577999988763211 011223445554432 23 789999999999999999999985432
Q ss_pred cceEEEEecC-CCCceEEEEecc--cchhhhcCCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEeeCeEEEEeeccc
Q 044173 99 SYVVFVDCNN-SPGAKFIHASLD--MAISDILSPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELVDGIFIGCSMNH 175 (455)
Q Consensus 99 g~~l~i~~~~-~~gv~f~~~~~~--~~l~~l~~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~gG~~lg~~~~H 175 (455)
+ -.++.... ...+.+.+.... ...++... .+.+.. .. .++-...|++++.+....++-.|-+.+||
T Consensus 79 ~-~~q~v~~~~~~~~~~~~~d~~~~~~~~~~~~------~~~~~~--~~--~fdl~~~pl~r~~l~~~~~~~~l~l~~HH 147 (466)
T 2xhg_A 79 N-VVQHNRGLGGQLYDFFSYNLTAQPDVQQAIE------AETQRL--HS--SMNLQEGPLVKVALFQTLHGDHLFLAIHH 147 (466)
T ss_dssp C-CEEEECCSSSCCCEEEEEECTTCSCHHHHHH------HHHHHH--HT--TCCTTTCCCEEEEEEEETTEEEEEEEEEG
T ss_pred c-eeeeccccccccceeEEEecCCcccHHHHHH------HHHHHH--Hh--ccCCCCCCeEEEEEEEcCCCCEEEEEeee
Confidence 2 23333311 223344332211 00111000 000000 00 12223569999888887655457799999
Q ss_pred ccccchhHHHHHHHHHHHHHhc--CCCCCCCCCC-CCCc---c---CCCC----C----------C-CCcccCCCCcccc
Q 044173 176 VLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRPP-VVKR---W---FPDG----R----------D-PIINLPFTHRDEF 231 (455)
Q Consensus 176 ~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~P-~~dr---~---~~~~----~----------~-~~~~~p~~~~~~~ 231 (455)
.++||.++..|++.+.+.++.. |........+ .+.. + .... . + ++..+|....
T Consensus 148 ~i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~--- 224 (466)
T 2xhg_A 148 LVVDGISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYE--- 224 (466)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSC---
T ss_pred eeechhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCcccc---
Confidence 9999999999999999998742 4111111111 1100 0 0000 0 0 0001111000
Q ss_pred cccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCCCCCCceEEEEeecCCCCCCC-
Q 044173 232 IRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNLPPDQTTSCRMAADNRPRLEP- 310 (455)
Q Consensus 232 ~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~~~~~~~~~~~~vd~R~rl~p- 310 (455)
.+...........+.++.+..++|++.+... ..+|.++++.|.+-..+.+--+ .....+.+++++|....+
T Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-----~~~t~~~~llaa~~~~l~~~~~---~~dv~ig~~~~gR~~~~~~ 296 (466)
T 2xhg_A 225 VTDCKQKSVRNMRIRLHPEETEQLLKHANQA-----YQTEINDLLLAALGLAFAEWSK---LAQIVIHLEGHGREDIIEQ 296 (466)
T ss_dssp CSSCBGGGEEEEEEECCHHHHHHHHHTGGGT-----TTCCHHHHHHHHHHHHHHHHHC---CSEEEEEEEECCCCSCSTT
T ss_pred ccccccccceEEEEEcCHHHHHHHHHHhHHh-----hCCCHHHHHHHHHHHHHHHHhC---CCceEEEecCCCCCccccC
Confidence 0000112234677899999999999877543 2589999999987666665543 345788899999976521
Q ss_pred CCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHhcC
Q 044173 311 PLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVNQT 353 (455)
Q Consensus 311 ~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~~~ 353 (455)
+--.+-+|+.+......+.+. .+.++.+++..|++.+.++.
T Consensus 297 ~~~~~~vG~f~n~lplr~~~~--~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 297 ANVARTVGWFTSQYPVLLDLK--QTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CCCTTCCSCCCEEEEEEEECS--CCCSHHHHHHHHHHHHHHSG
T ss_pred CCccccccceeeeccEEEecC--CCCCHHHHHHHHHHHHHhCc
Confidence 112456677766655555443 24678889999998887763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.28 E-value=6.1e-05 Score=86.04 Aligned_cols=257 Identities=13% Similarity=0.144 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCCCceEEEEecc-cchhhhcCCCCCCcccccccCCCCCC
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSPGAKFIHASLD-MAISDILSPTYVPLVVQSFFDHDRAL 146 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~gv~f~~~~~~-~~l~~l~~~~~~p~~~~~l~p~~~~~ 146 (455)
+++|++|+..++..++.|--++...... + -.++.. ....+.+.+.... .+-.+- ...+.++.-.....
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~---~-p~Q~v~-~~~~~~~~~~d~~~~~~~~~------~~~~~~~~~~~~~~ 117 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVK---R-PVQVVL-KKRQFHIEEIDLTHLTGSEQ------TAKINEYKEQDKIR 117 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCS---S-CEEEEE-SCCCCCEEEEECTTSCHHHH------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCC---e-EEEEEC-CCCCCceEEEECCCCCchhH------HHHHHHHHHHHhcC
Confidence 7899999999999999999999865431 1 344444 3333344332211 000000 00000000000000
Q ss_pred CCCCCCCCeEEEEEEEe-eCeEEEEeecccccccchhHHHHHHHHHHHHHhc--CCCCCCCCC-CCCC--ccCCC-----
Q 044173 147 NHDGHSRPLLSIQVTEL-VDGIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ--GKMDSISRP-PVVK--RWFPD----- 215 (455)
Q Consensus 147 ~~~~~~~p~l~vqvt~~-~gG~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~--G~~~~~~~~-P~~d--r~~~~----- 215 (455)
.++-...|++++.+... .+...|.+.+||.++||.++..|++.+.+++++. |........ ++-| .++..
T Consensus 118 ~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~ 197 (1304)
T 2vsq_A 118 GFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQA 197 (1304)
T ss_dssp CCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHH
T ss_pred CCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhH
Confidence 12223569999998888 4679999999999999999999999999998742 311111111 1111 01000
Q ss_pred ----------CCCCCcccCCCCcccccccCCCCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHH
Q 044173 216 ----------GRDPIINLPFTHRDEFIRRYEAPQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSIT 285 (455)
Q Consensus 216 ----------~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~ 285 (455)
....+..+|... .+...........+.++++..++||+.+++. .+|.+.++.|.+-..+.
T Consensus 198 ~~~yW~~~L~~~~~~~~lp~~~----~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~------~~T~~~vllaa~a~~L~ 267 (1304)
T 2vsq_A 198 SLRYWREYLEGFEGQTTFAEQR----KKQKDGYEPKELLFSPSEAETKAFTELAKSQ------HTTLSTALQAVWSVLIS 267 (1304)
T ss_dssp HHHHHHHHHTTCCCCCTTTTTC----CCSSCCCCEEEEEECCCHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCccccCCCCC----CccccccCcceEEEecCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHHH
Confidence 000011111100 0000112234567889999999999999876 58999999997765555
Q ss_pred hhcCCCCCCceEEEEeecCCCCCCCCCCCCCcccccccccceeeccccccCcHHHHHHHHHHHHHh
Q 044173 286 RTRNLPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVTTVGELLGHDLGWAAWKLHQTVVN 351 (455)
Q Consensus 286 ~ar~~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~iR~ai~~ 351 (455)
|--+ .....+..+++.|....+.+ ++-+|+.+......+.++ .+.++.++...+++...+
T Consensus 268 r~tg---~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 268 RYQQ---SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp HHHT---CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred HhcC---CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence 5433 34578999999997643222 455677666655555443 246788888888777654
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.11 E-value=0.0011 Score=67.75 Aligned_cols=247 Identities=12% Similarity=0.114 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEecCCC-------CceEEEEecccchhhhc---------
Q 044173 64 IKTLLDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDCNNSP-------GAKFIHASLDMAISDIL--------- 127 (455)
Q Consensus 64 ~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~~~~~-------gv~f~~~~~~~~l~~l~--------- 127 (455)
..++.++||.|+-.+--.+|-+|+++..+.. .. . .+......++ .-.|.+...+.+-+|+.
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~-~~-~-~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~ 147 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDE-VP-A-IITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAA 147 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSS-SS-C-EEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCC-Cc-c-cEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhcc
Confidence 4678999999999999999999999997732 11 1 2222221111 01244433333333331
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCeEEEEEEEeeC--eEEEEeecccccccchhHHHHHHHHHHHHHhc-CCCCCCC
Q 044173 128 SPTYVPLVVQSFFDHDRALNHDGHSRPLLSIQVTELVD--GIFIGCSMNHVLGDGTSFWNFFNAFSEIFQAQ-GKMDSIS 204 (455)
Q Consensus 128 ~~~~~p~~~~~l~p~~~~~~~~~~~~p~l~vqvt~~~g--G~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r~~-G~~~~~~ 204 (455)
.....|...-.++-..+ ....+.| +.+ -.-|.+.+||.++||.|...|++.+-+..... +.... .
T Consensus 148 ~~~~~p~~~~~l~~v~~---~~~~~~~--------~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~-~ 215 (519)
T 3fot_A 148 ANDNTPSKSIELFLLSD---VSTDSTP--------IPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDS-R 215 (519)
T ss_dssp TC-CCCCCSCEEEEEES---SSSTTSC--------CCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CG-G
T ss_pred cccCCCccceEEEEEec---ccccccc--------CCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCc-c
Confidence 00011111101110000 0000111 323 46788999999999999999999988887631 10000 1
Q ss_pred CCCCCC-----ccCCCCCCCCcccCCC----Ccc----cc----------cc-cC--CCCCceeEEEEeCHHHHHHHHHH
Q 044173 205 RPPVVK-----RWFPDGRDPIINLPFT----HRD----EF----------IR-RY--EAPQLLERIFHFTGESIARLKAK 258 (455)
Q Consensus 205 ~~P~~d-----r~~~~~~~~~~~~p~~----~~~----~~----------~~-~~--~~~~~~~~~f~~~~~~l~~Lk~~ 258 (455)
..|.++ ..+.+....-..+|.. +.+ ++ .. +. .+..-....+.|++++.++|++.
T Consensus 216 ~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ 295 (519)
T 3fot_A 216 EMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKA 295 (519)
T ss_dssp GSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHH
T ss_pred CCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHH
Confidence 122221 1111111000111100 000 00 00 11 11223456788999999999999
Q ss_pred HhhhcCCCCCCcCHHHHHHHHHHHHHHhhcC---CCCCCceEEEEeecCCCCCCCCCCCCCccccccccccee
Q 044173 259 ANAEAGNNTNKISSFQALSALVWRSITRTRN---LPPDQTTSCRMAADNRPRLEPPLPREYFGNSINPLRGVT 328 (455)
Q Consensus 259 ~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~---~~~~~~~~~~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~ 328 (455)
|++. -+..+|-+.+|.|.+-.++.+... ........+.++||+|+++.++.-.+|||.+.......+
T Consensus 296 ck~~---~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 296 VKTR---LGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp HHHH---TCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred HHhc---CCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 9986 245689999998887766665422 112235788999999999976655688888877654433
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=74.32 E-value=2.2 Score=37.74 Aligned_cols=44 Identities=16% Similarity=0.341 Sum_probs=33.1
Q ss_pred CCCeEEEEEEEeeCe---EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 152 SRPLLSIQVTELVDG---IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 152 ~~p~l~vqvt~~~gG---~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
..|++.+--..-++| +-|++++||.++||.-+.+|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 358876421111233 78999999999999999999999988764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=73.73 E-value=2.3 Score=37.71 Aligned_cols=43 Identities=21% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCeEEEEEEEeeCe---EEEEeecccccccchhHHHHHHHHHHHH
Q 044173 152 SRPLLSIQVTELVDG---IFIGCSMNHVLGDGTSFWNFFNAFSEIF 194 (455)
Q Consensus 152 ~~p~l~vqvt~~~gG---~~lg~~~~H~v~Dg~g~~~fl~~wa~~~ 194 (455)
..|++.+=-..-++| +-|++++||.++||.-+..|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 357775321111233 7899999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=72.63 E-value=2.5 Score=37.50 Aligned_cols=43 Identities=12% Similarity=0.240 Sum_probs=33.5
Q ss_pred CCeEEEEEEEeeCe---EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 153 RPLLSIQVTELVDG---IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 153 ~p~l~vqvt~~~gG---~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
.|.+.+--..-++| +-|++++||.++||.-+.+|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 57775432222333 78999999999999999999999998886
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.47 E-value=3 Score=37.58 Aligned_cols=29 Identities=17% Similarity=0.292 Sum_probs=27.5
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999886
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=70.06 E-value=2.6 Score=37.52 Aligned_cols=29 Identities=21% Similarity=0.418 Sum_probs=27.2
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999986
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=69.55 E-value=3.2 Score=37.20 Aligned_cols=29 Identities=24% Similarity=0.484 Sum_probs=27.4
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 66999999999999999999999999887
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=69.29 E-value=3.2 Score=37.42 Aligned_cols=29 Identities=10% Similarity=0.214 Sum_probs=27.4
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999999887
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=67.76 E-value=3.6 Score=37.57 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=27.3
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999999886
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=63.22 E-value=5 Score=36.46 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=27.5
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 238 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVE 238 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHh
Confidence 55999999999999999999999999998
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=61.99 E-value=5.8 Score=35.90 Aligned_cols=29 Identities=17% Similarity=0.517 Sum_probs=27.4
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999997
No 23
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=44.65 E-value=22 Score=22.77 Aligned_cols=22 Identities=27% Similarity=0.323 Sum_probs=19.6
Q ss_pred eeEEEEeCHHHHHHHHHHHhhh
Q 044173 241 LERIFHFTGESIARLKAKANAE 262 (455)
Q Consensus 241 ~~~~f~~~~~~l~~Lk~~~~~~ 262 (455)
....|+|+.++-+.|++.|.++
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3568999999999999999887
No 24
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=42.92 E-value=15 Score=19.39 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=15.6
Q ss_pred CCcCHHHHHHHHHHHHHHh
Q 044173 268 NKISSFQALSALVWRSITR 286 (455)
Q Consensus 268 ~~~St~d~l~A~lW~~i~~ 286 (455)
+-++..|-|+-++|+.+..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3578899999999998753
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=41.82 E-value=5.4 Score=39.21 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=0.0
Q ss_pred EEEEeecccccccchhHHHHHHHHHHHHH
Q 044173 167 IFIGCSMNHVLGDGTSFWNFFNAFSEIFQ 195 (455)
Q Consensus 167 ~~lg~~~~H~v~Dg~g~~~fl~~wa~~~r 195 (455)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 45999999999999999999999998886
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=41.30 E-value=42 Score=25.93 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEe
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDC 106 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~ 106 (455)
++.|.++|...+.+-..+||.+...-+ |.+++|..
T Consensus 94 lea~ekalkemirqarkfagtvtytl~----gn~l~i~i 128 (170)
T 4hhu_A 94 LEALEKALKEMIRQARKFAGTVTYTLS----GNRLVIVI 128 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEC----SSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEe----CCEEEEEE
Confidence 779999999999999999999997765 43888887
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=37.65 E-value=42 Score=25.93 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEe
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDC 106 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~ 106 (455)
++.|.++|...+.+-..+||.+...-+ |.+++|..
T Consensus 13 lea~ekalkemirqarkfagtvtytl~----gn~l~i~i 47 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLS----GNRLVIVI 47 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEE----TTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEe----CCEEEEEE
Confidence 778999999999999999999997655 33888887
No 28
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=33.01 E-value=46 Score=22.13 Aligned_cols=24 Identities=21% Similarity=0.235 Sum_probs=21.0
Q ss_pred CceeEEEEeCHHHHHHHHHHHhhh
Q 044173 239 QLLERIFHFTGESIARLKAKANAE 262 (455)
Q Consensus 239 ~~~~~~f~~~~~~l~~Lk~~~~~~ 262 (455)
+.-...|+|+.++-+.|++.|.++
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE 37 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE 37 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT
T ss_pred cceEEEEEecHHHHHHHHHHHHHH
Confidence 345788999999999999999887
No 29
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=32.30 E-value=1.2e+02 Score=20.66 Aligned_cols=35 Identities=11% Similarity=0.132 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhhhhhcCCCceEeecCCCCCCcceEEEEe
Q 044173 68 LDRLKHSLSLTLVHFYPLAGRLVTRQTDSPPSYVVFVDC 106 (455)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~~~~~g~~l~i~~ 106 (455)
++.+.++|...+.+-..+||.+...-+ |..++|+.
T Consensus 12 leafekalkemirqarkfagtvtytld----gndleiri 46 (85)
T 2kl8_A 12 LEAFEKALKEMIRQARKFAGTVTYTLD----GNDLEIRI 46 (85)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEEC----SSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEec----CCeeEEEE
Confidence 778899999999999999999997655 33788887
No 30
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=26.27 E-value=1.7e+02 Score=20.42 Aligned_cols=47 Identities=11% Similarity=0.023 Sum_probs=38.4
Q ss_pred CCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHHHhhcCC
Q 044173 238 PQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSITRTRNL 290 (455)
Q Consensus 238 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i~~ar~~ 290 (455)
.......++++.+--++|+..|..+ ..|.|.-|.+.|-+.+.+-..+
T Consensus 17 r~~~kf~LRlP~eL~~~L~~~A~~~------grSlNaeIv~~Le~sl~~e~~l 63 (69)
T 3qoq_A 17 RTADKFVVRLPEGMREQIAEVARSH------HRSMNSEIIARLEQSLLQEGAL 63 (69)
T ss_dssp TTSEEEEEECCTTHHHHHHHHHHHT------TCCHHHHHHHHHHHHHHHHTC-
T ss_pred ccCCceEEECCHHHHHHHHHHHHHh------CCCHHHHHHHHHHHHHHHcCCc
Confidence 3445678999999999999999887 6899999999999888765544
No 31
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=24.72 E-value=1.7e+02 Score=20.80 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=34.4
Q ss_pred CCCceeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHH
Q 044173 237 APQLLERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALVWRSI 284 (455)
Q Consensus 237 ~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~lW~~i 284 (455)
+......+|+|+.+.-++||..|... .+|..|+|-.++=..+
T Consensus 31 ~~~~~Rlti~i~~~lh~rlK~~Aa~~------g~Smsdvvreli~~~L 72 (76)
T 1p94_A 31 SGKIKRVNVNFDEEKHTRFKAACARK------GTSITDVVNQLVDNWL 72 (76)
T ss_dssp TTCEEECCEEEEHHHHHHHHHHHHHH------TCCHHHHHHHHHHHHH
T ss_pred ccCceeEEEEcCHHHHHHHHHHHHHc------CCCHHHHHHHHHHHHH
Confidence 34556678999999999999999877 5899999988875544
No 32
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=23.78 E-value=1.7e+02 Score=21.00 Aligned_cols=34 Identities=18% Similarity=0.007 Sum_probs=28.1
Q ss_pred eeEEEEeCHHHHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q 044173 241 LERIFHFTGESIARLKAKANAEAGNNTNKISSFQALSALV 280 (455)
Q Consensus 241 ~~~~f~~~~~~l~~Lk~~~~~~~~~~~~~~St~d~l~A~l 280 (455)
..-+|.++.++=++||..|... .+|.++.+.-++
T Consensus 2 SrLTIrLpd~qH~rLKalAa~q------G~SInqli~E~l 35 (83)
T 2an7_A 2 SRLTIDMTDQQHQSLKALAALQ------GKTIKQYALERL 35 (83)
T ss_dssp EEEEEEECHHHHHHHHHHHHHH------TSCHHHHHHHHT
T ss_pred ceeeEeCCHHHHHHHHHHHHHc------CCcHHHHHHHHc
Confidence 4568999999999999999876 478888877754
Done!