Query 044174
Match_columns 332
No_of_seqs 155 out of 605
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 21:14:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 4.5E-89 1.5E-93 667.4 30.7 321 1-332 25-378 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 8.1E-90 2.8E-94 667.7 23.0 318 1-332 26-357 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 2E-87 6.8E-92 654.7 33.6 325 1-330 26-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.5 3.7E-12 1.2E-16 117.4 19.4 201 29-312 57-258 (279)
5 2p35_A Trans-aconitate 2-methy 99.4 2.3E-11 8E-16 109.9 16.6 203 28-313 32-238 (259)
6 2yqz_A Hypothetical protein TT 99.3 4.2E-11 1.5E-15 108.2 14.9 204 28-313 38-243 (263)
7 3bus_A REBM, methyltransferase 99.2 1.6E-09 5.6E-14 98.7 22.7 196 28-307 60-257 (273)
8 3dtn_A Putative methyltransfer 99.2 1.1E-09 3.9E-14 97.5 16.7 168 28-260 43-213 (234)
9 3ujc_A Phosphoethanolamine N-m 99.1 6E-09 2E-13 94.0 20.9 194 28-309 54-249 (266)
10 3f4k_A Putative methyltransfer 99.1 6.8E-09 2.3E-13 93.6 21.0 211 28-332 45-257 (257)
11 3hem_A Cyclopropane-fatty-acyl 99.1 1.2E-08 4E-13 94.9 21.1 212 28-311 71-287 (302)
12 3kkz_A Uncharacterized protein 99.1 4.7E-08 1.6E-12 89.0 23.1 170 28-283 45-216 (267)
13 3hnr_A Probable methyltransfer 99.0 2.8E-09 9.6E-14 93.9 13.5 157 29-261 45-201 (220)
14 3sm3_A SAM-dependent methyltra 99.0 7.8E-09 2.7E-13 91.3 16.3 172 28-262 29-208 (235)
15 3h2b_A SAM-dependent methyltra 99.0 3E-09 1E-13 92.7 12.3 143 30-263 42-184 (203)
16 4htf_A S-adenosylmethionine-de 99.0 9.1E-09 3.1E-13 94.7 16.2 164 28-262 67-233 (285)
17 4gek_A TRNA (CMO5U34)-methyltr 99.0 1.3E-08 4.5E-13 93.9 15.8 165 28-255 69-239 (261)
18 1kpg_A CFA synthase;, cyclopro 99.0 2.2E-07 7.5E-12 85.3 24.0 116 113-284 128-244 (287)
19 3bkx_A SAM-dependent methyltra 98.9 1.7E-07 5.9E-12 85.2 21.9 168 28-262 42-220 (275)
20 2aot_A HMT, histamine N-methyl 98.9 1.8E-08 6.1E-13 93.5 15.3 159 28-259 51-219 (292)
21 2o57_A Putative sarcosine dime 98.9 1.6E-07 5.6E-12 86.6 21.8 152 28-261 81-234 (297)
22 3dli_A Methyltransferase; PSI- 98.9 4.5E-09 1.6E-13 94.3 10.2 146 28-264 40-187 (240)
23 1vl5_A Unknown conserved prote 98.9 2E-08 6.7E-13 91.1 13.6 155 28-262 36-191 (260)
24 3ege_A Putative methyltransfer 98.9 1.2E-08 4.1E-13 93.1 11.9 193 28-310 33-232 (261)
25 1xtp_A LMAJ004091AAA; SGPP, st 98.9 5.1E-08 1.7E-12 87.5 15.7 148 28-262 92-239 (254)
26 1xxl_A YCGJ protein; structura 98.9 7.1E-08 2.4E-12 86.6 16.3 155 28-262 20-175 (239)
27 1pjz_A Thiopurine S-methyltran 98.8 6.3E-08 2.1E-12 85.3 15.0 88 103-262 89-177 (203)
28 3bgv_A MRNA CAP guanine-N7 met 98.8 1.4E-08 4.9E-13 95.0 11.3 101 111-262 111-233 (313)
29 2fk8_A Methoxy mycolic acid sy 98.8 2.9E-07 1E-11 86.0 20.2 116 113-284 154-270 (318)
30 2vdw_A Vaccinia virus capping 98.8 7.8E-08 2.7E-12 90.5 16.1 179 28-261 47-246 (302)
31 3lcc_A Putative methyl chlorid 98.8 5.2E-08 1.8E-12 86.9 14.1 140 31-262 68-208 (235)
32 1nkv_A Hypothetical protein YJ 98.8 8.8E-08 3E-12 86.2 15.5 151 28-261 35-187 (256)
33 3mgg_A Methyltransferase; NYSG 98.8 2.9E-08 1E-12 90.6 12.5 164 28-262 36-199 (276)
34 2a14_A Indolethylamine N-methy 98.8 4.9E-08 1.7E-12 89.3 13.6 86 112-262 154-239 (263)
35 1ri5_A MRNA capping enzyme; me 98.8 3.5E-07 1.2E-11 83.8 18.9 165 28-261 63-250 (298)
36 3dlc_A Putative S-adenosyl-L-m 98.8 7E-08 2.4E-12 84.0 13.1 156 31-260 45-202 (219)
37 3vc1_A Geranyl diphosphate 2-C 98.8 3.6E-07 1.2E-11 85.4 18.6 152 28-261 116-269 (312)
38 3lst_A CALO1 methyltransferase 98.8 1E-07 3.5E-12 90.8 14.5 151 28-260 183-335 (348)
39 3ou2_A SAM-dependent methyltra 98.8 1.1E-08 3.8E-13 89.4 7.1 156 30-261 47-205 (218)
40 3l8d_A Methyltransferase; stru 98.7 1.5E-07 5.2E-12 83.7 14.4 148 29-261 53-200 (242)
41 3e23_A Uncharacterized protein 98.7 1.2E-07 4.1E-12 83.0 13.4 142 28-262 42-183 (211)
42 3reo_A (ISO)eugenol O-methyltr 98.7 4.2E-07 1.4E-11 87.5 18.3 154 28-261 202-355 (368)
43 3dh0_A SAM dependent methyltra 98.7 9.2E-08 3.1E-12 84.0 12.6 146 28-262 36-182 (219)
44 3p9c_A Caffeic acid O-methyltr 98.7 5.8E-07 2E-11 86.5 18.5 154 28-261 200-353 (364)
45 2g72_A Phenylethanolamine N-me 98.7 1.2E-07 4.3E-12 87.4 12.9 88 110-262 170-257 (289)
46 4hg2_A Methyltransferase type 98.7 5.1E-08 1.7E-12 89.8 10.2 103 28-194 38-140 (257)
47 3cc8_A Putative methyltransfer 98.7 2.2E-07 7.6E-12 81.4 13.7 153 28-262 31-186 (230)
48 2p7i_A Hypothetical protein; p 98.7 1.3E-07 4.4E-12 83.9 12.2 152 30-262 43-200 (250)
49 2ex4_A Adrenal gland protein A 98.7 9.4E-08 3.2E-12 85.7 11.2 147 29-262 79-226 (241)
50 3g5t_A Trans-aconitate 3-methy 98.7 7.5E-07 2.6E-11 82.5 17.4 152 28-253 35-196 (299)
51 3g5l_A Putative S-adenosylmeth 98.7 1.9E-07 6.6E-12 84.0 13.0 172 28-263 43-218 (253)
52 3ocj_A Putative exported prote 98.7 2.7E-07 9.4E-12 85.9 14.4 167 28-260 117-290 (305)
53 1vlm_A SAM-dependent methyltra 98.7 1.4E-07 4.8E-12 83.4 11.6 97 104-261 92-188 (219)
54 2gb4_A Thiopurine S-methyltran 98.7 5E-07 1.7E-11 82.8 15.7 89 103-263 140-229 (252)
55 4a6d_A Hydroxyindole O-methylt 98.7 4.2E-07 1.4E-11 87.1 15.8 153 29-259 179-332 (353)
56 3mcz_A O-methyltransferase; ad 98.7 2E-07 6.9E-12 88.4 13.4 154 30-258 180-336 (352)
57 1y8c_A S-adenosylmethionine-de 98.7 3.6E-07 1.2E-11 81.1 14.2 107 29-191 37-144 (246)
58 3dp7_A SAM-dependent methyltra 98.7 2.5E-07 8.5E-12 88.8 13.9 158 29-259 179-340 (363)
59 3i53_A O-methyltransferase; CO 98.7 4.3E-07 1.5E-11 85.6 15.2 152 28-261 168-321 (332)
60 3gwz_A MMCR; methyltransferase 98.7 5.8E-07 2E-11 86.4 16.2 153 28-260 201-355 (369)
61 2r3s_A Uncharacterized protein 98.6 6.8E-07 2.3E-11 83.8 15.3 158 28-261 164-323 (335)
62 3jwh_A HEN1; methyltransferase 98.6 1E-06 3.6E-11 77.4 15.1 153 30-260 30-191 (217)
63 3g2m_A PCZA361.24; SAM-depende 98.6 1.4E-07 4.7E-12 87.5 9.4 121 101-262 138-275 (299)
64 1qzz_A RDMB, aclacinomycin-10- 98.6 6.4E-07 2.2E-11 85.5 14.2 156 28-262 181-340 (374)
65 3e8s_A Putative SAM dependent 98.6 1.8E-07 6.2E-12 81.8 9.3 156 30-261 53-209 (227)
66 3bkw_A MLL3908 protein, S-aden 98.6 6.7E-07 2.3E-11 79.4 13.2 169 29-263 43-216 (243)
67 3pfg_A N-methyltransferase; N, 98.6 4E-07 1.4E-11 82.5 11.8 105 28-192 49-154 (263)
68 2ip2_A Probable phenazine-spec 98.5 3.2E-06 1.1E-10 79.5 17.8 151 31-261 169-322 (334)
69 2kw5_A SLR1183 protein; struct 98.5 1.3E-06 4.3E-11 75.8 13.6 141 32-262 32-172 (202)
70 1fp1_D Isoliquiritigenin 2'-O- 98.5 1.1E-06 3.8E-11 84.3 14.1 152 28-260 208-359 (372)
71 1tw3_A COMT, carminomycin 4-O- 98.5 1.3E-06 4.6E-11 82.9 14.4 156 28-262 182-340 (360)
72 3cgg_A SAM-dependent methyltra 98.5 1.1E-06 3.6E-11 74.9 12.0 129 28-260 45-174 (195)
73 3jwg_A HEN1, methyltransferase 98.5 4.1E-06 1.4E-10 73.6 16.1 154 30-262 30-193 (219)
74 2zfu_A Nucleomethylin, cerebra 98.5 3.8E-07 1.3E-11 80.0 8.8 113 28-260 66-178 (215)
75 3i9f_A Putative type 11 methyl 98.5 3.5E-06 1.2E-10 70.9 14.2 134 28-262 16-149 (170)
76 1x19_A CRTF-related protein; m 98.5 2.4E-06 8.3E-11 81.4 14.5 158 28-261 189-348 (359)
77 2xvm_A Tellurite resistance pr 98.4 1.3E-06 4.6E-11 74.9 11.3 138 30-259 33-171 (199)
78 2ld4_A Anamorsin; methyltransf 98.4 1.5E-06 5.3E-11 73.9 11.5 117 28-256 11-130 (176)
79 3d2l_A SAM-dependent methyltra 98.4 1.9E-06 6.4E-11 76.5 12.0 52 104-191 87-139 (243)
80 2i62_A Nicotinamide N-methyltr 98.4 1.1E-06 3.8E-11 79.0 10.5 97 101-262 140-240 (265)
81 1zg3_A Isoflavanone 4'-O-methy 98.4 1.8E-06 6E-11 82.4 12.4 151 30-261 194-347 (358)
82 4e2x_A TCAB9; kijanose, tetron 98.4 1.6E-06 5.4E-11 84.2 12.1 146 28-262 106-254 (416)
83 2gs9_A Hypothetical protein TT 98.4 3.9E-06 1.3E-10 73.2 13.3 136 29-251 36-171 (211)
84 3ggd_A SAM-dependent methyltra 98.4 2.1E-06 7.2E-11 76.7 11.5 152 28-262 55-220 (245)
85 2qe6_A Uncharacterized protein 98.4 6E-06 2.1E-10 76.3 14.8 86 110-257 153-238 (274)
86 3ofk_A Nodulation protein S; N 98.4 3.6E-06 1.2E-10 73.6 12.6 106 28-191 50-156 (216)
87 1ve3_A Hypothetical protein PH 98.4 1.4E-05 4.7E-10 70.0 16.2 107 30-192 39-145 (227)
88 3m70_A Tellurite resistance pr 98.4 3.1E-06 1.1E-10 77.6 12.5 139 29-259 120-258 (286)
89 1fp2_A Isoflavone O-methyltran 98.4 3.7E-06 1.3E-10 80.0 13.1 151 28-260 187-340 (352)
90 3gu3_A Methyltransferase; alph 98.4 2.8E-05 9.6E-10 71.4 18.5 108 28-191 21-128 (284)
91 3bxo_A N,N-dimethyltransferase 98.3 8.9E-06 3E-10 71.9 14.4 106 28-193 39-145 (239)
92 4fsd_A Arsenic methyltransfera 98.3 2.9E-06 1E-10 81.9 12.0 110 29-193 83-207 (383)
93 2p8j_A S-adenosylmethionine-de 98.3 3.9E-06 1.3E-10 72.8 11.0 155 28-255 22-177 (209)
94 3g07_A 7SK snRNA methylphospha 98.3 2.2E-06 7.7E-11 79.5 9.6 48 110-189 173-220 (292)
95 1yzh_A TRNA (guanine-N(7)-)-me 98.3 3.3E-06 1.1E-10 74.3 9.6 166 29-259 41-211 (214)
96 3giw_A Protein of unknown func 98.2 1.4E-05 5E-10 74.4 14.0 61 171-256 182-242 (277)
97 2avn_A Ubiquinone/menaquinone 98.2 8.8E-06 3E-10 73.7 10.5 156 29-262 54-214 (260)
98 3thr_A Glycine N-methyltransfe 98.1 1.2E-05 4.1E-10 73.7 10.4 111 30-191 58-177 (293)
99 3opn_A Putative hemolysin; str 98.1 6.6E-06 2.2E-10 74.4 8.5 67 171-262 119-185 (232)
100 3mq2_A 16S rRNA methyltransfer 98.1 1.9E-05 6.6E-10 69.2 10.7 154 28-262 26-185 (218)
101 3grz_A L11 mtase, ribosomal pr 98.1 2.7E-05 9.3E-10 67.6 11.5 20 29-48 60-79 (205)
102 4df3_A Fibrillarin-like rRNA/T 98.1 1.1E-05 3.7E-10 73.4 9.2 123 10-192 61-185 (233)
103 3q87_B N6 adenine specific DNA 98.1 3.5E-06 1.2E-10 71.9 5.5 72 30-131 24-95 (170)
104 2plw_A Ribosomal RNA methyltra 98.0 2.8E-05 9.6E-10 67.1 10.5 55 110-191 102-156 (201)
105 3hm2_A Precorrin-6Y C5,15-meth 98.0 7.9E-05 2.7E-09 62.6 12.9 101 28-191 24-129 (178)
106 3iv6_A Putative Zn-dependent a 98.0 2.9E-05 9.9E-10 71.7 10.8 22 28-49 44-65 (261)
107 2pxx_A Uncharacterized protein 98.0 8.1E-05 2.8E-09 64.3 12.6 122 28-192 41-162 (215)
108 3dmg_A Probable ribosomal RNA 98.0 5.6E-05 1.9E-09 73.3 12.4 108 29-190 233-341 (381)
109 2fca_A TRNA (guanine-N(7)-)-me 98.0 3.2E-05 1.1E-09 68.4 9.7 21 29-49 38-58 (213)
110 3q7e_A Protein arginine N-meth 98.0 1.5E-05 5.1E-10 76.2 8.0 103 30-187 67-171 (349)
111 1wzn_A SAM-dependent methyltra 97.9 7.2E-05 2.5E-09 66.8 11.8 107 28-191 40-147 (252)
112 3p9n_A Possible methyltransfer 97.9 4.7E-05 1.6E-09 65.4 9.6 47 111-194 110-158 (189)
113 1ej0_A FTSJ; methyltransferase 97.9 2.9E-05 1E-09 64.4 7.8 111 28-192 21-139 (180)
114 3evz_A Methyltransferase; NYSG 97.9 0.00012 4.3E-09 64.4 12.2 63 110-191 119-181 (230)
115 3mti_A RRNA methylase; SAM-dep 97.9 0.0001 3.5E-09 62.7 11.2 21 28-48 21-41 (185)
116 3lbf_A Protein-L-isoaspartate 97.9 7.7E-05 2.6E-09 64.8 10.5 81 28-128 76-157 (210)
117 3r0q_C Probable protein argini 97.8 3.6E-05 1.2E-09 74.2 8.6 106 28-189 62-169 (376)
118 3e05_A Precorrin-6Y C5,15-meth 97.8 9.5E-05 3.3E-09 64.1 10.6 22 28-49 39-60 (204)
119 1zx0_A Guanidinoacetate N-meth 97.8 5.8E-05 2E-09 67.2 9.3 108 29-189 60-170 (236)
120 1dus_A MJ0882; hypothetical pr 97.8 0.00017 5.8E-09 60.9 11.3 46 110-192 115-160 (194)
121 3p2e_A 16S rRNA methylase; met 97.8 0.00015 5.2E-09 64.8 11.4 68 169-262 119-186 (225)
122 3uwp_A Histone-lysine N-methyl 97.8 0.00011 3.7E-09 72.3 11.0 22 28-49 172-193 (438)
123 3ckk_A TRNA (guanine-N(7)-)-me 97.8 0.00019 6.4E-09 64.7 11.3 21 28-48 45-65 (235)
124 3dxy_A TRNA (guanine-N(7)-)-me 97.7 2.4E-05 8.3E-10 69.8 5.1 112 29-189 34-150 (218)
125 2nxc_A L11 mtase, ribosomal pr 97.7 0.00016 5.4E-09 65.7 9.9 19 30-48 121-139 (254)
126 2fyt_A Protein arginine N-meth 97.7 0.00015 5.3E-09 68.9 9.9 103 29-186 64-168 (340)
127 2b3t_A Protein methyltransfera 97.7 0.00014 4.9E-09 66.5 9.0 124 30-189 110-238 (276)
128 3m33_A Uncharacterized protein 97.6 0.00033 1.1E-08 62.0 10.6 21 29-49 48-68 (226)
129 4dzr_A Protein-(glutamine-N5) 97.6 3.6E-05 1.2E-09 66.4 4.1 128 28-189 29-165 (215)
130 4dcm_A Ribosomal RNA large sub 97.6 6.4E-05 2.2E-09 72.7 6.2 108 30-189 223-334 (375)
131 3hp7_A Hemolysin, putative; st 97.6 0.00019 6.4E-09 67.3 9.1 158 10-261 72-232 (291)
132 1g6q_1 HnRNP arginine N-methyl 97.6 0.00018 6E-09 68.0 8.8 102 30-186 39-142 (328)
133 1u2z_A Histone-lysine N-methyl 97.6 0.00053 1.8E-08 67.7 12.2 23 28-50 241-263 (433)
134 1af7_A Chemotaxis receptor met 97.5 0.00014 4.6E-09 67.6 7.3 48 104-187 202-250 (274)
135 1nt2_A Fibrillarin-like PRE-rR 97.5 0.00034 1.2E-08 61.8 9.5 22 28-49 56-77 (210)
136 3orh_A Guanidinoacetate N-meth 97.5 0.00034 1.2E-08 62.7 9.5 23 166-188 147-169 (236)
137 1vbf_A 231AA long hypothetical 97.5 0.00043 1.5E-08 60.9 10.0 22 28-49 69-90 (231)
138 1fbn_A MJ fibrillarin homologu 97.5 0.0012 4.2E-08 58.4 12.9 23 28-50 73-95 (230)
139 1l3i_A Precorrin-6Y methyltran 97.5 0.00029 9.8E-09 59.4 7.7 21 28-48 32-52 (192)
140 2b25_A Hypothetical protein; s 97.4 0.00031 1.1E-08 66.1 8.5 77 172-264 202-284 (336)
141 3eey_A Putative rRNA methylase 97.4 0.0012 4E-08 56.6 11.5 117 29-190 22-140 (197)
142 2yxe_A Protein-L-isoaspartate 97.4 0.00062 2.1E-08 59.2 9.8 82 28-128 76-160 (215)
143 3fzg_A 16S rRNA methylase; met 97.4 7.9E-05 2.7E-09 66.0 3.9 70 28-130 48-131 (200)
144 2nyu_A Putative ribosomal RNA 97.4 0.00017 5.8E-09 61.7 5.7 118 28-191 21-147 (196)
145 2pjd_A Ribosomal RNA small sub 97.4 0.00023 7.8E-09 67.5 7.0 106 31-190 198-304 (343)
146 2ozv_A Hypothetical protein AT 97.4 0.00074 2.5E-08 61.4 10.1 25 167-191 148-172 (260)
147 3sso_A Methyltransferase; macr 97.4 0.00096 3.3E-08 65.3 11.2 126 28-217 215-357 (419)
148 2esr_A Methyltransferase; stru 97.4 0.00036 1.2E-08 58.8 7.1 20 29-48 31-50 (177)
149 3lpm_A Putative methyltransfer 97.4 0.00076 2.6E-08 61.0 9.6 126 29-190 49-177 (259)
150 1jg1_A PIMT;, protein-L-isoasp 97.3 0.00092 3.2E-08 59.4 9.8 22 29-50 91-112 (235)
151 3mb5_A SAM-dependent methyltra 97.3 0.0015 5.2E-08 58.3 11.3 76 28-121 92-169 (255)
152 1ws6_A Methyltransferase; stru 97.3 0.00061 2.1E-08 56.5 8.0 21 29-49 41-61 (171)
153 2pbf_A Protein-L-isoaspartate 97.3 0.00024 8.3E-09 62.5 5.7 87 28-127 79-175 (227)
154 2ift_A Putative methylase HI07 97.3 0.00063 2.1E-08 59.3 8.0 19 30-48 54-72 (201)
155 2fhp_A Methylase, putative; al 97.3 0.00046 1.6E-08 58.3 6.9 20 29-48 44-63 (187)
156 1p91_A Ribosomal RNA large sub 97.3 0.0013 4.6E-08 59.2 10.3 73 29-123 85-157 (269)
157 3njr_A Precorrin-6Y methylase; 97.3 0.0042 1.4E-07 54.2 13.1 22 28-49 54-75 (204)
158 1jsx_A Glucose-inhibited divis 97.3 0.00077 2.6E-08 58.1 8.1 20 30-49 66-85 (207)
159 1i1n_A Protein-L-isoaspartate 97.2 0.0012 4.2E-08 57.8 9.3 22 28-49 76-97 (226)
160 1i9g_A Hypothetical protein RV 97.2 0.0022 7.6E-08 58.1 11.0 76 29-121 99-178 (280)
161 3u81_A Catechol O-methyltransf 97.2 0.0022 7.5E-08 56.3 10.6 20 30-49 59-78 (221)
162 2fpo_A Methylase YHHF; structu 97.2 0.0012 4.2E-08 57.5 8.5 19 30-48 55-73 (202)
163 2h00_A Methyltransferase 10 do 97.2 0.0012 4.1E-08 59.1 8.6 22 29-50 65-86 (254)
164 1dl5_A Protein-L-isoaspartate 97.2 0.0017 5.9E-08 60.7 9.9 81 29-128 75-158 (317)
165 4hc4_A Protein arginine N-meth 97.1 0.00068 2.3E-08 65.7 6.9 20 167-186 167-186 (376)
166 3g89_A Ribosomal RNA small sub 97.1 0.002 6.9E-08 58.4 9.7 22 28-49 79-100 (249)
167 1r18_A Protein-L-isoaspartate( 97.1 0.00029 9.9E-09 62.3 3.8 22 29-50 84-105 (227)
168 1xdz_A Methyltransferase GIDB; 97.1 0.0008 2.7E-08 60.0 6.6 20 29-48 70-89 (240)
169 3id6_C Fibrillarin-like rRNA/T 97.1 0.0041 1.4E-07 56.1 11.4 22 28-49 75-96 (232)
170 2wa2_A Non-structural protein 97.1 0.00038 1.3E-08 64.5 4.5 23 28-50 81-103 (276)
171 1o9g_A RRNA methyltransferase; 97.1 0.0016 5.6E-08 58.3 8.6 22 29-50 51-72 (250)
172 2yxd_A Probable cobalt-precorr 97.1 0.006 2.1E-07 50.8 11.6 20 29-48 35-54 (183)
173 2oxt_A Nucleoside-2'-O-methylt 97.1 0.00044 1.5E-08 63.7 4.6 23 28-50 73-95 (265)
174 2y1w_A Histone-arginine methyl 97.0 0.0011 3.8E-08 63.0 7.5 76 29-125 50-127 (348)
175 2ipx_A RRNA 2'-O-methyltransfe 97.0 0.0041 1.4E-07 55.0 10.4 23 28-50 76-98 (233)
176 3bzb_A Uncharacterized protein 97.0 0.0019 6.4E-08 59.4 8.4 107 30-192 80-208 (281)
177 3ntv_A MW1564 protein; rossman 97.0 0.0021 7.3E-08 57.1 8.4 19 30-48 72-90 (232)
178 2pwy_A TRNA (adenine-N(1)-)-me 97.0 0.0023 7.8E-08 57.0 8.5 76 28-120 95-172 (258)
179 1uir_A Polyamine aminopropyltr 96.9 0.0029 1E-07 59.3 9.5 21 28-48 76-96 (314)
180 3bwc_A Spermidine synthase; SA 96.9 0.0012 4E-08 61.8 6.6 21 28-48 94-114 (304)
181 2p41_A Type II methyltransfera 96.9 0.00071 2.4E-08 63.5 5.1 23 28-50 81-103 (305)
182 3fpf_A Mtnas, putative unchara 96.9 0.0032 1.1E-07 59.1 9.2 21 28-48 121-141 (298)
183 3htx_A HEN1; HEN1, small RNA m 96.9 0.004 1.4E-07 66.0 10.8 110 29-192 721-837 (950)
184 1yb2_A Hypothetical protein TA 96.9 0.0024 8.2E-08 58.2 8.2 75 28-120 109-185 (275)
185 3gjy_A Spermidine synthase; AP 96.9 0.0025 8.6E-08 60.3 8.5 101 28-191 88-202 (317)
186 1o54_A SAM-dependent O-methylt 96.9 0.0039 1.3E-07 56.7 9.5 74 29-120 112-187 (277)
187 3tma_A Methyltransferase; thum 96.9 0.0071 2.4E-07 57.3 11.5 129 8-190 188-318 (354)
188 3b3j_A Histone-arginine methyl 96.8 0.0033 1.1E-07 62.6 9.2 76 29-125 158-235 (480)
189 1iy9_A Spermidine synthase; ro 96.8 0.0068 2.3E-07 55.7 10.5 21 28-48 74-94 (275)
190 3gdh_A Trimethylguanosine synt 96.8 0.0061 2.1E-07 53.8 9.9 83 29-132 78-162 (241)
191 2gpy_A O-methyltransferase; st 96.8 0.0046 1.6E-07 54.5 9.0 20 30-49 55-74 (233)
192 1inl_A Spermidine synthase; be 96.8 0.0027 9.4E-08 59.0 7.8 21 28-48 89-109 (296)
193 3dou_A Ribosomal RNA large sub 96.8 0.0013 4.4E-08 57.2 5.2 22 28-49 24-45 (191)
194 1g8a_A Fibrillarin-like PRE-rR 96.8 0.0099 3.4E-07 52.0 10.8 23 28-50 72-94 (227)
195 3lcv_B Sisomicin-gentamicin re 96.7 0.0058 2E-07 56.6 9.4 71 28-131 131-215 (281)
196 2hnk_A SAM-dependent O-methylt 96.7 0.0059 2E-07 54.2 8.8 21 30-50 61-81 (239)
197 2frn_A Hypothetical protein PH 96.7 0.016 5.3E-07 53.1 11.8 20 30-49 126-145 (278)
198 3adn_A Spermidine synthase; am 96.6 0.0098 3.3E-07 55.4 10.4 21 28-48 82-102 (294)
199 3duw_A OMT, O-methyltransferas 96.6 0.028 9.6E-07 48.8 12.6 20 30-49 59-78 (223)
200 3tfw_A Putative O-methyltransf 96.5 0.028 9.7E-07 50.3 12.5 20 30-49 64-83 (248)
201 2vdv_E TRNA (guanine-N(7)-)-me 96.5 0.016 5.3E-07 51.8 10.6 21 29-49 49-69 (246)
202 3dr5_A Putative O-methyltransf 96.5 0.0098 3.3E-07 52.7 9.2 20 30-49 57-76 (221)
203 2xyq_A Putative 2'-O-methyl tr 96.5 0.018 6E-07 53.7 10.9 110 28-191 62-173 (290)
204 2yvl_A TRMI protein, hypotheti 96.4 0.029 1E-06 49.3 11.8 21 29-49 91-111 (248)
205 2o07_A Spermidine synthase; st 96.4 0.013 4.4E-07 54.8 9.7 21 28-48 94-114 (304)
206 1sqg_A SUN protein, FMU protei 96.4 0.018 6.1E-07 56.2 10.9 126 29-191 246-376 (429)
207 1ixk_A Methyltransferase; open 96.3 0.016 5.3E-07 54.3 9.8 27 165-191 222-248 (315)
208 2pt6_A Spermidine synthase; tr 96.3 0.013 4.5E-07 55.1 9.2 21 28-48 115-135 (321)
209 2bm8_A Cephalosporin hydroxyla 96.3 0.0026 8.8E-08 57.1 4.0 36 9-50 67-102 (236)
210 1xj5_A Spermidine synthase 1; 96.2 0.039 1.4E-06 52.2 12.0 21 28-48 119-139 (334)
211 2b2c_A Spermidine synthase; be 96.2 0.011 3.7E-07 55.6 7.7 21 28-48 107-127 (314)
212 2i7c_A Spermidine synthase; tr 96.1 0.025 8.7E-07 52.0 9.8 21 28-48 77-97 (283)
213 3ajd_A Putative methyltransfer 96.1 0.0091 3.1E-07 54.5 6.7 27 166-192 188-214 (274)
214 1mjf_A Spermidine synthase; sp 96.1 0.032 1.1E-06 51.2 10.4 21 28-48 74-94 (281)
215 3tr6_A O-methyltransferase; ce 96.0 0.015 5E-07 50.7 7.4 20 30-49 65-84 (225)
216 2igt_A SAM dependent methyltra 96.0 0.035 1.2E-06 52.5 10.5 28 165-192 248-275 (332)
217 2frx_A Hypothetical protein YE 96.0 0.046 1.6E-06 54.3 11.8 21 29-49 117-137 (479)
218 1nv8_A HEMK protein; class I a 95.9 0.049 1.7E-06 50.1 10.7 20 30-49 124-143 (284)
219 3r3h_A O-methyltransferase, SA 95.8 0.011 3.6E-07 53.2 5.4 20 30-49 61-80 (242)
220 2yxl_A PH0851 protein, 450AA l 95.7 0.078 2.7E-06 52.0 12.0 20 30-49 260-279 (450)
221 1wxx_A TT1595, hypothetical pr 95.7 0.18 6E-06 48.2 14.2 30 162-191 298-327 (382)
222 4dmg_A Putative uncharacterize 95.7 0.15 5.3E-06 49.2 13.9 29 162-190 299-327 (393)
223 3frh_A 16S rRNA methylase; met 95.6 0.0041 1.4E-07 56.9 2.2 72 28-132 104-186 (253)
224 2f8l_A Hypothetical protein LM 95.4 0.16 5.6E-06 47.6 12.5 128 28-191 129-258 (344)
225 3c3p_A Methyltransferase; NP_9 95.4 0.014 4.9E-07 50.4 4.7 20 30-49 57-76 (210)
226 3c3y_A Pfomt, O-methyltransfer 95.4 0.057 1.9E-06 48.0 8.8 21 29-49 70-90 (237)
227 3cbg_A O-methyltransferase; cy 95.3 0.033 1.1E-06 49.3 7.0 20 30-49 73-92 (232)
228 1sui_A Caffeoyl-COA O-methyltr 95.3 0.022 7.5E-07 51.3 5.8 21 29-49 79-99 (247)
229 2b78_A Hypothetical protein SM 95.3 0.02 7E-07 55.1 5.9 28 164-191 306-333 (385)
230 2as0_A Hypothetical protein PH 95.3 0.23 7.8E-06 47.6 13.3 30 162-191 308-337 (396)
231 2avd_A Catechol-O-methyltransf 95.2 0.17 5.9E-06 43.8 11.3 20 30-49 70-89 (229)
232 3kr9_A SAM-dependent methyltra 95.2 0.14 4.9E-06 45.8 10.8 22 28-49 14-35 (225)
233 2ih2_A Modification methylase 95.1 0.096 3.3E-06 50.1 10.1 25 167-191 142-166 (421)
234 3m6w_A RRNA methylase; rRNA me 95.0 0.039 1.3E-06 54.7 7.1 127 29-191 101-231 (464)
235 1ne2_A Hypothetical protein TA 94.9 0.062 2.1E-06 45.9 7.3 76 28-129 50-125 (200)
236 3a27_A TYW2, uncharacterized p 94.7 0.097 3.3E-06 47.6 8.5 22 28-49 118-139 (272)
237 3v97_A Ribosomal RNA large sub 94.5 0.18 6E-06 52.5 10.9 29 164-192 632-660 (703)
238 3gnl_A Uncharacterized protein 94.5 0.032 1.1E-06 50.8 4.6 22 28-49 20-41 (244)
239 3lec_A NADB-rossmann superfami 94.3 0.038 1.3E-06 49.8 4.6 22 28-49 20-41 (230)
240 1zq9_A Probable dimethyladenos 94.3 0.12 4.1E-06 47.4 8.1 21 29-49 28-48 (285)
241 3gru_A Dimethyladenosine trans 94.2 0.14 4.8E-06 47.6 8.4 21 29-49 50-70 (295)
242 3m4x_A NOL1/NOP2/SUN family pr 94.1 0.16 5.3E-06 50.3 8.9 22 29-50 105-126 (456)
243 3tm4_A TRNA (guanine N2-)-meth 93.9 0.23 7.9E-06 47.3 9.5 35 8-49 203-237 (373)
244 3evf_A RNA-directed RNA polyme 93.9 0.53 1.8E-05 43.5 11.5 21 29-49 74-94 (277)
245 1wy7_A Hypothetical protein PH 93.8 0.27 9.4E-06 41.8 9.0 79 29-129 49-127 (207)
246 3tqs_A Ribosomal RNA small sub 93.7 0.16 5.5E-06 46.1 7.7 52 29-86 29-92 (255)
247 3c0k_A UPF0064 protein YCCW; P 93.4 0.36 1.2E-05 46.2 10.0 26 166-191 316-341 (396)
248 2qm3_A Predicted methyltransfe 93.2 0.46 1.6E-05 45.1 10.3 103 30-191 173-280 (373)
249 3khk_A Type I restriction-modi 93.1 0.75 2.6E-05 46.3 12.2 144 30-190 245-396 (544)
250 2h1r_A Dimethyladenosine trans 93.0 0.2 6.9E-06 46.3 7.2 20 29-48 42-61 (299)
251 4azs_A Methyltransferase WBDD; 92.4 0.19 6.5E-06 50.7 6.6 21 28-48 65-85 (569)
252 2okc_A Type I restriction enzy 91.9 1.5 5.2E-05 42.6 12.3 23 29-51 171-193 (445)
253 4gqb_A Protein arginine N-meth 91.9 0.43 1.5E-05 49.1 8.6 24 27-50 355-378 (637)
254 2yx1_A Hypothetical protein MJ 91.1 0.61 2.1E-05 43.7 8.2 19 29-48 195-213 (336)
255 3lkd_A Type I restriction-modi 90.8 3.7 0.00013 41.3 14.0 22 170-191 338-360 (542)
256 3fut_A Dimethyladenosine trans 89.2 0.44 1.5E-05 43.6 5.3 47 32-85 49-107 (271)
257 1qam_A ERMC' methyltransferase 89.1 0.75 2.6E-05 41.0 6.7 21 29-49 30-50 (244)
258 2zig_A TTHA0409, putative modi 88.9 0.58 2E-05 43.0 5.9 28 163-190 71-98 (297)
259 1qyr_A KSGA, high level kasuga 88.8 0.76 2.6E-05 41.5 6.6 51 30-87 22-85 (252)
260 3eld_A Methyltransferase; flav 88.1 4 0.00014 38.0 11.0 22 28-49 80-101 (300)
261 3s1s_A Restriction endonucleas 87.5 4.7 0.00016 42.8 12.3 24 168-191 444-467 (878)
262 2dul_A N(2),N(2)-dimethylguano 86.7 2.1 7.1E-05 41.0 8.6 20 30-49 48-67 (378)
263 3k0b_A Predicted N6-adenine-sp 86.5 3.2 0.00011 39.8 9.8 21 29-49 201-221 (393)
264 3ldu_A Putative methylase; str 85.7 4.3 0.00015 38.7 10.2 22 29-50 195-216 (385)
265 3ftd_A Dimethyladenosine trans 85.3 0.76 2.6E-05 41.3 4.4 22 29-50 31-52 (249)
266 3uzu_A Ribosomal RNA small sub 85.3 0.88 3E-05 41.7 4.9 50 29-86 42-107 (279)
267 1yub_A Ermam, rRNA methyltrans 84.6 0.75 2.6E-05 40.7 4.0 23 28-50 28-50 (245)
268 3ldg_A Putative uncharacterize 84.2 3.7 0.00013 39.3 9.0 21 29-49 194-214 (384)
269 2ar0_A M.ecoki, type I restric 83.4 2.1 7.1E-05 43.0 7.1 23 29-51 169-191 (541)
270 1uwv_A 23S rRNA (uracil-5-)-me 82.2 4.5 0.00015 39.1 8.8 21 29-49 286-306 (433)
271 2qy6_A UPF0209 protein YFCK; s 79.7 1.2 4E-05 40.5 3.4 24 28-51 59-82 (257)
272 2k4m_A TR8_protein, UPF0146 pr 77.4 2.2 7.7E-05 35.8 4.1 34 12-49 22-56 (153)
273 3ua3_A Protein arginine N-meth 77.3 2.9 9.9E-05 43.6 5.8 39 12-51 393-431 (745)
274 1m6y_A S-adenosyl-methyltransf 76.8 1.5 5.2E-05 40.7 3.3 21 30-50 27-47 (301)
275 4auk_A Ribosomal RNA large sub 76.2 7.6 0.00026 37.2 8.1 92 9-126 190-282 (375)
276 3k6r_A Putative transferase PH 72.3 5.5 0.00019 36.4 5.8 21 28-48 124-144 (278)
277 3ll7_A Putative methyltransfer 72.2 3.7 0.00013 39.8 4.9 46 30-79 94-153 (410)
278 3gcz_A Polyprotein; flavivirus 71.2 4.7 0.00016 37.2 5.1 21 29-49 90-110 (282)
279 2r6z_A UPF0341 protein in RSP 70.7 1.5 5E-05 39.7 1.5 20 30-49 84-103 (258)
280 3bt7_A TRNA (uracil-5-)-methyl 66.6 13 0.00046 34.8 7.4 18 31-48 215-232 (369)
281 2cmg_A Spermidine synthase; tr 64.8 3.4 0.00011 37.3 2.7 21 28-48 71-91 (262)
282 3p8z_A Mtase, non-structural p 63.1 5.2 0.00018 36.4 3.5 18 30-47 79-96 (267)
283 3lkz_A Non-structural protein 62.6 4.5 0.00015 37.8 3.1 18 30-47 95-112 (321)
284 2jjq_A Uncharacterized RNA met 60.7 4 0.00014 39.6 2.5 20 30-49 291-310 (425)
285 1g60_A Adenine-specific methyl 60.1 14 0.00047 32.9 5.9 21 169-189 54-74 (260)
286 2oyr_A UPF0341 protein YHIQ; a 57.2 5 0.00017 36.3 2.4 19 31-49 90-108 (258)
287 2b9e_A NOL1/NOP2/SUN domain fa 56.7 17 0.00059 33.4 6.1 21 30-50 103-123 (309)
288 2zig_A TTHA0409, putative modi 55.8 7.9 0.00027 35.2 3.5 19 30-48 236-254 (297)
289 3o4f_A Spermidine synthase; am 51.3 1.2E+02 0.0042 27.7 10.8 22 27-48 81-102 (294)
290 1boo_A Protein (N-4 cytosine-s 50.0 27 0.00092 32.1 6.2 30 163-192 58-87 (323)
291 2px2_A Genome polyprotein [con 47.3 7.2 0.00025 35.7 1.7 22 28-49 72-93 (269)
292 1eg2_A Modification methylase 45.7 17 0.00059 33.6 4.2 22 169-190 86-107 (319)
293 3vyw_A MNMC2; tRNA wobble urid 42.4 18 0.00061 33.7 3.6 24 28-51 95-118 (308)
294 2qfm_A Spermine synthase; sper 33.5 20 0.0007 34.1 2.5 22 27-48 186-207 (364)
295 3pvc_A TRNA 5-methylaminomethy 30.6 27 0.00091 35.6 3.0 24 28-51 57-80 (689)
296 3axs_A Probable N(2),N(2)-dime 28.7 27 0.00092 33.4 2.5 20 30-49 53-72 (392)
297 1vpq_A Hypothetical protein TM 28.3 1.8E+02 0.0062 26.1 8.0 118 98-251 52-174 (273)
298 1wg8_A Predicted S-adenosylmet 28.0 38 0.0013 31.1 3.3 21 30-50 23-43 (285)
299 1g60_A Adenine-specific methyl 27.4 46 0.0016 29.4 3.7 19 30-48 213-231 (260)
300 2lmc_A Bacterial RNA polymeras 26.6 47 0.0016 24.5 2.8 30 229-259 45-78 (84)
301 1d0q_A DNA primase; zinc-bindi 25.9 25 0.00087 26.9 1.5 19 33-51 59-77 (103)
302 3ps9_A TRNA 5-methylaminomethy 23.6 42 0.0014 33.9 3.0 25 28-52 65-89 (676)
303 3v97_A Ribosomal RNA large sub 23.1 44 0.0015 34.4 3.0 21 29-49 190-210 (703)
304 1q1h_A TFE, transcription fact 21.0 46 0.0016 25.0 2.1 42 208-249 48-93 (110)
305 3qua_A Putative uncharacterize 20.7 57 0.002 28.2 2.8 41 206-249 158-198 (199)
306 1i4w_A Mitochondrial replicati 20.2 2.9E+02 0.01 25.7 7.9 52 29-87 58-124 (353)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=4.5e-89 Score=667.36 Aligned_cols=321 Identities=32% Similarity=0.515 Sum_probs=278.4
Q ss_pred ChhhhhhHHHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCC
Q 044174 1 RLAADAVKEKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTS 80 (332)
Q Consensus 1 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~ 80 (332)
|+++..++|++++||.+++... .|...++++|||||||+|+||+.+++.||++|+++|.+.+...++|+|||||||||+
T Consensus 25 ~~~~~~~~~~~~~ai~~l~~~~-~~~~~~~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~ 103 (384)
T 2efj_A 25 NLFLIRVKPVLEQCIQELLRAN-LPNINKCFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQ 103 (384)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTT-CTTTTTEEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhcc-cCCcCCceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCc
Confidence 5788999999999999988643 211123899999999999999999999999999988652111357899999999999
Q ss_pred CchHHHHhcCccc------------ccceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCcee
Q 044174 81 NDFNTLFTSLPQQ------------REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIH 148 (332)
Q Consensus 81 NDFn~lf~~l~~~------------~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~ 148 (332)
||||+||++||.+ .+||++|||||||+||||++|+|+|||++||||||++|+.+.+..+++||||+||
T Consensus 104 NDFN~lF~~L~~~~~~~~~~~g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~ 183 (384)
T 2efj_A 104 NDFNSVFKLLPSFYRNLEKENGRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIY 183 (384)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSS
T ss_pred cchHHHHhhhhhhHhhhhhhccCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceE
Confidence 9999999999852 3699999999999999999999999999999999999999999999999999999
Q ss_pred ecCC-CHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEecccCCC--CCCCCcchhHHHHHHHHHHHHHHHhhccch
Q 044174 149 YTNA-AEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPGIPYG--MPYSHLTNGVMYDLMATIFMELANEQLITE 225 (332)
Q Consensus 149 ~~~~-~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr~~~--~~~~~~~~~~~~~~l~~al~~mv~eGli~~ 225 (332)
|+++ |++|.+||++||++||..||++|++||||||+||++++|+++. ++.++ +.+.++|++||.+|+|++
T Consensus 184 i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~-------~~l~~al~~lv~eGli~~ 256 (384)
T 2efj_A 184 SSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSM-------DLLEMSINDLVIEGHLEE 256 (384)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHH-------HHHHHHHHHHHHHTSSCH
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccH-------HHHHHHHHHHHHhCCcch
Confidence 9999 8999999999999999999999999999999999999999997 65432 399999999999999999
Q ss_pred hhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC-CCCCC---CC--------------CccHHHHHHHHHHHHhhH
Q 044174 226 AELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN-PTSWL---EG--------------PIDIKAWTMHVRAAMEAM 287 (332)
Q Consensus 226 e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~-p~~~~---~~--------------~~~~~~~a~~iRa~~epl 287 (332)
+++|+||+|||+||++||+++|+++|+|+|+++|+++ +.... ++ ...|+.+++++||++||+
T Consensus 257 ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iRa~~epl 336 (384)
T 2efj_A 257 EKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLETFNAPYDAGFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPI 336 (384)
T ss_dssp HHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEEEEEETTTTCCC---------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEEEeecccccccccccccccccccccchHhHhHHHhhhhhHHhhhhh
Confidence 9999999999999999999999999999999999886 21111 11 246789999999999999
Q ss_pred HHhhhCHHHHHHHHHHHHHHHHhchhhhhcCCcceEEEEEEEEeC
Q 044174 288 FSKHFRIEIIDEMFNRLIRRLFEFSDKVESGYKEKTQLFVILMRK 332 (332)
Q Consensus 288 l~~hfg~~i~delf~r~~~~v~~~l~~~~~~~~~~~~~~~~L~r~ 332 (332)
|.+|||++|+|+||+||++++++++.. ++.++++++++|+||
T Consensus 337 l~~hfG~~i~d~lF~ry~~~~~~~~~~---~~~~~~~~~~~L~k~ 378 (384)
T 2efj_A 337 LASHFGEAILPDLSHRIAKNAAKVLRS---GKGFYDSVIISLAKK 378 (384)
T ss_dssp HHHHHCSTTHHHHHHHHHHHHHHHHHH---TCCEEEEEEEEEEEC
T ss_pred hHHhccHHHHHHHHHHHHHHHHHHHhh---CCCceEEEEEEEEEc
Confidence 999999999999999999999999887 788899999999996
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=8.1e-90 Score=667.65 Aligned_cols=318 Identities=33% Similarity=0.525 Sum_probs=290.9
Q ss_pred ChhhhhhHHHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCC
Q 044174 1 RLAADAVKEKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTS 80 (332)
Q Consensus 1 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~ 80 (332)
|+++..+||++++||.+++.... .+++++|||||||+|+||+.+++.||++|+++|.+.+. .++|+|||||||||+
T Consensus 26 ~~~~~~~~~~l~~ai~~~~~~~~---~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~-~~~pe~~v~~nDLp~ 101 (359)
T 1m6e_X 26 RQVISITKPITEAAITALYSGDT---VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGR-ENSPEYQIFLNDLPG 101 (359)
T ss_dssp HHHHHHTHHHHHHHHHHHHSSSS---SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSC-SSCCEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHhhccC---CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCC-CCCCceEEEecCCCc
Confidence 46889999999999999876321 37789999999999999999999999999999976541 147899999999999
Q ss_pred CchHHHHhcCccc----ccceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCC-CHH
Q 044174 81 NDFNTLFTSLPQQ----REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNA-AEE 155 (332)
Q Consensus 81 NDFn~lf~~l~~~----~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~-~~~ 155 (332)
||||+||++|+.+ .+||++|||||||+||||++|+|++||++||||||++|+.+.+ |||+||++++ |++
T Consensus 102 NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~------nkg~i~~~~~~p~~ 175 (359)
T 1m6e_X 102 NDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIES------NKGNIYMANTCPQS 175 (359)
T ss_dssp SCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCC------CTTTTSSCSSSCCT
T ss_pred hHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhc------cCCceEecCCCCHH
Confidence 9999999999863 4699999999999999999999999999999999999999876 9999999999 889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCc
Q 044174 156 VVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPI 235 (332)
Q Consensus 156 v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~ 235 (332)
|.+||++||++||..||++|++||||||+||++++|+++.+++++ +.+.+|+.|.++|++||.+|+|++|++|+||+||
T Consensus 176 v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~-~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~ 254 (359)
T 1m6e_X 176 VLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRAST-ECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQ 254 (359)
T ss_dssp TSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSST-TTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCcccc-chHHHHHHHHHHHHHHHHccccchhhhhccCCCc
Confidence 999999999999999999999999999999999999999988776 5778899999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHhCCceEEeEEEEeC----CCCCC-----CCCccHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHH
Q 044174 236 YSASSEEMVKLVDKNGHFSIKTVELTN----PTSWL-----EGPIDIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIR 306 (332)
Q Consensus 236 y~ps~~E~~~~ie~~G~F~I~~le~~~----p~~~~-----~~~~~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~ 306 (332)
|+||++||+++|+++|+|+|+++|+++ |+... +....|+.+++|+||++||+|.+|||++++|++|+||++
T Consensus 255 y~ps~~E~~~~ie~~G~F~i~~~e~~~~~~~~~~~~~d~~~~~~~~g~~~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~ 334 (359)
T 1m6e_X 255 YTPSPTEVEAEILKEGSFLIDHIEASEIYWSSCTKDGDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKL 334 (359)
T ss_dssp BCCCSHHHHHHHHHTTTBCCEEEEEEEEETTCCSSCTTCCSSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCceEEEEEEEeeccCcccchhhhhhhhhHhHhHhhhhhhhhcchhhHHhccHHHHHHHHHHHHH
Confidence 999999999999999999999999886 22110 013578899999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCcceEEEEEEEEeC
Q 044174 307 RLFEFSDKVESGYKEKTQLFVILMRK 332 (332)
Q Consensus 307 ~v~~~l~~~~~~~~~~~~~~~~L~r~ 332 (332)
++++++.. ++.++++++++|+||
T Consensus 335 ~~~~~~~~---~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 335 LIIERMSK---EKTKFINVIVSLIRK 357 (359)
T ss_dssp HHHHHHHS---SCCEEEEEEEEEEBC
T ss_pred HHHHHHhh---CCCceEEEEEEEEeC
Confidence 99999887 788899999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-87 Score=654.66 Aligned_cols=325 Identities=30% Similarity=0.534 Sum_probs=293.7
Q ss_pred ChhhhhhHHHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCC
Q 044174 1 RLAADAVKEKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTS 80 (332)
Q Consensus 1 ~~~~~~~~~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~ 80 (332)
++++..+||++++||++++.... ..+++++|||||||+|+||+.+++.||++|+++|.+.+. .+|+|||||||||+
T Consensus 26 ~~~~~~~~~~~~~ai~~l~~~~~--~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~--~~pe~~v~~nDLp~ 101 (374)
T 3b5i_A 26 AMHARSMLHLLEETLENVHLNSS--ASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGI--DPPEFTAFFSDLPS 101 (374)
T ss_dssp CTTHHHHHHHHHHHHHTSCCCCS--SSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTC--CCCCEEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHhhcccc--CCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCC--CCCceeEEecCCCc
Confidence 56889999999999987754221 136789999999999999999999999999999987653 57899999999999
Q ss_pred CchHHHHhcCccc---------------ccceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCC
Q 044174 81 NDFNTLFTSLPQQ---------------REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKG 145 (332)
Q Consensus 81 NDFn~lf~~l~~~---------------~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg 145 (332)
||||+||++|+++ .+||++|||||||+||||++|+|+|||++||||||++|+.+.+..+|+||||
T Consensus 102 NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg 181 (374)
T 3b5i_A 102 NDFNTLFQLLPPLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRG 181 (374)
T ss_dssp SCHHHHHHHSCCBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTT
T ss_pred cchHHHHhhhhhhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCC
Confidence 9999999999974 2599999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHH-HHHHHHHHHHHHhhccc
Q 044174 146 RIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMY-DLMATIFMELANEQLIT 224 (332)
Q Consensus 146 ~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~-~~l~~al~~mv~eGli~ 224 (332)
+|||++++|+|.+||++||++||..||++|++||||||+||++++|+++.+++++.+.+.+| ++|.++|++|+.||+++
T Consensus 182 ~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~ 261 (374)
T 3b5i_A 182 RVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVA 261 (374)
T ss_dssp TSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSC
T ss_pred ceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcc
Confidence 99999996669999999999999999999999999999999999999998887765678889 99999999999999999
Q ss_pred hhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC-CCCCCC---C--CccHHHHHHHHHHHHhhHHHhhhCHHHHH
Q 044174 225 EAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN-PTSWLE---G--PIDIKAWTMHVRAAMEAMFSKHFRIEIID 298 (332)
Q Consensus 225 ~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~-p~~~~~---~--~~~~~~~a~~iRa~~epll~~hfg~~i~d 298 (332)
++++|+||+|+|+||++||+++|+++|+|+|+++|+++ |.+... + ...|+.+++++||++||+|.+|||++++|
T Consensus 262 ~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I~~le~~~~~~~~~~~~~~~~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d 341 (374)
T 3b5i_A 262 AEKRDGFNIPVYAPSLQDFKEVVDANGSFAIDKLVVYKGGSPLVVNEPDDASEVGRAFASSCRSVAGVLVEAHIGEELSN 341 (374)
T ss_dssp HHHHSSCCCCBCCCCHHHHHHHHHHHCSEEEEEEEEEECCCCCCCSSTTCHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred hhhcccCCccccCCCHHHHHHHHHhcCCcEEEEEEEEeecCCccccccchhHHHHHHHHHHHHHhccchhHhhccHHHHH
Confidence 99999999999999999999999987889999999987 432111 1 24788999999999999999999999999
Q ss_pred HHHHHHHHHHHhchhhhhcCCcc--eEEEEEEEE
Q 044174 299 EMFNRLIRRLFEFSDKVESGYKE--KTQLFVILM 330 (332)
Q Consensus 299 elf~r~~~~v~~~l~~~~~~~~~--~~~~~~~L~ 330 (332)
++|+||++++++++..+. ++.+ +++++++|+
T Consensus 342 ~lf~ry~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 374 (374)
T 3b5i_A 342 KLFSRVESRATSHAKDVL-VNLQFFHIVASLSFT 374 (374)
T ss_dssp HHHHHHHHHHHHTCHHHH-TTCCCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhHHHhh-hccccceEEEEEEeC
Confidence 999999999999998543 5666 789999885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=3.7e-12 Score=117.41 Aligned_cols=201 Identities=16% Similarity=0.144 Sum_probs=128.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.. . ..+|+-.|+-. +.-...+.... + +..+.+++..-
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--------~-----------~~~v~gvD~s~-~~~~~a~~~~~--~--~~~~~~d~~~~ 112 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--------S-----------GAEVLGTDNAA-TMIEKARQNYP--H--LHFDVADARNF 112 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--------T-----------TCEEEEEESCH-HHHHHHHHHCT--T--SCEEECCTTTC
T ss_pred CCCEEEEecCCCCHHHHHHHh--------C-----------CCeEEEEECCH-HHHHHHHhhCC--C--CEEEECChhhC
Confidence 457999999999999877653 0 12444444321 11111111111 1 11122333332
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+ ++++|+++|+.++||+... ..+|+.-++-|+|||++++.
T Consensus 113 ~~-~~~fD~v~~~~~l~~~~d~--------------------------------------~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 113 RV-DKPLDAVFSNAMLHWVKEP--------------------------------------EAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp CC-SSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred Cc-CCCcCEEEEcchhhhCcCH--------------------------------------HHHHHHHHHhcCCCcEEEEE
Confidence 33 5799999999999997531 23566666789999999999
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC-CCCCC
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN-PTSWL 267 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~-p~~~~ 267 (332)
..+.++ ...+.+.+...+.. .|.- ......|+++++.++++.++++.| |++..++.+. |....
T Consensus 154 ~~~~~~--------~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~~ 217 (279)
T 3ccf_A 154 FGGKGN--------IKYILEALYNALET---LGIH----NPQALNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTLA 217 (279)
T ss_dssp EECTTT--------THHHHHHHHHHHHH---HTCC----CGGGGCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEECS
T ss_pred ecCCcc--------hHHHHHHHHHHHHh---cCCc----cccCcCceeCCCHHHHHHHHHHcC-CEEEEEEEeccccccc
Confidence 877543 12223333333332 2321 223556889999999999999999 9999888775 43221
Q ss_pred CCCccHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHHHHHhch
Q 044174 268 EGPIDIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIRRLFEFS 312 (332)
Q Consensus 268 ~~~~~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~~v~~~l 312 (332)
.+.+.+..|++++..+++. .++++..+++.+++.+.+.+..
T Consensus 218 ---~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 258 (279)
T 3ccf_A 218 ---EGEFGMANWIQMFASAFLV-GLTPDQQVQLIRKVEATLQDKL 258 (279)
T ss_dssp ---SGGGHHHHHHHHHCHHHHT-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhhHHHhc-cCCHHHHHHHHHHHHHHHHhhc
Confidence 1225788899988777776 4888888888888888887653
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.35 E-value=2.3e-11 Score=109.86 Aligned_cols=203 Identities=11% Similarity=0.098 Sum_probs=121.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.+.. |..+|+..|+-.. .-...+.... + +..+.+.+..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~-----------------~~~~v~~~D~s~~-~~~~a~~~~~--~--~~~~~~d~~~ 89 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRY-----------------GVNVITGIDSDDD-MLEKAADRLP--N--TNFGKADLAT 89 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHH-----------------CTTSEEEEESCHH-HHHHHHHHST--T--SEEEECCTTT
T ss_pred CCCCEEEEecCcCCHHHHHHHHhC-----------------CCCEEEEEECCHH-HHHHHHHhCC--C--cEEEECChhh
Confidence 345799999999999998775431 1123444443221 1111111111 1 1223345544
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-. |++++|+++|+.++||+.. ...+|+.-.+-|+|||++++
T Consensus 90 ~~-~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 90 WK-PAQKADLLYANAVFQWVPD--------------------------------------HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp CC-CSSCEEEEEEESCGGGSTT--------------------------------------HHHHHHHHGGGEEEEEEEEE
T ss_pred cC-ccCCcCEEEEeCchhhCCC--------------------------------------HHHHHHHHHHhcCCCeEEEE
Confidence 44 7889999999999999732 22456666788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhccc-CcCcccCCHHHHHHHHHhCCceEEeEEEEeC--CC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSF-NLPIYSASSEEMVKLVDKNGHFSIKTVELTN--PT 264 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f-n~P~y~ps~~E~~~~ie~~G~F~I~~le~~~--p~ 264 (332)
...+..+. .....+.++...+.... ..... ..+..+++.+++++++++.| |+|+..+... +.
T Consensus 131 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~~~ 195 (259)
T 2p35_A 131 QMPDNLQE-------------PTHIAMHETADGGPWKD-AFSGGGLRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNHPM 195 (259)
T ss_dssp EEECCTTS-------------HHHHHHHHHHHHSTTGG-GC-------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEEEE
T ss_pred EeCCCCCc-------------HHHHHHHHHhcCcchHH-HhccccccccCCCCHHHHHHHHHhcC-CceEEEEEEeeecc
Confidence 98753211 11222333332211111 11111 23567789999999999999 9877666432 22
Q ss_pred CCCCCCccHHHHHHHHHHHH-hhHHHhhhCHHHHHHHHHHHHHHHHhchh
Q 044174 265 SWLEGPIDIKAWTMHVRAAM-EAMFSKHFRIEIIDEMFNRLIRRLFEFSD 313 (332)
Q Consensus 265 ~~~~~~~~~~~~a~~iRa~~-epll~~hfg~~i~delf~r~~~~v~~~l~ 313 (332)
. +.+.+..|+++.. .+++. .++++..+++.+++.+.+++...
T Consensus 196 ~------~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (259)
T 2p35_A 196 K------DADSIVEWVKGTGLRPYLA-AAGEENREAFLADYTRRIAAAYP 238 (259)
T ss_dssp S------CHHHHHHHHTTTTTTHHHH-TTCGGGHHHHHHHHHHHHHHHSC
T ss_pred C------CchHHhhhhhcCcchHHHH-hCCHHHHHHHHHHHHHHHHHhCC
Confidence 1 2366788888653 35554 58888889999999888886543
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.29 E-value=4.2e-11 Score=108.22 Aligned_cols=204 Identities=10% Similarity=0.086 Sum_probs=123.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.+. ..+|+-.|.-. +.....+........-+..+.+++..
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~-------------------~~~v~~vD~s~-~~~~~a~~~~~~~~~~~~~~~~d~~~ 97 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR-------------------GYRYIALDADA-AMLEVFRQKIAGVDRKVQVVQADARA 97 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT-------------------TCEEEEEESCH-HHHHHHHHHTTTSCTTEEEEESCTTS
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC-------------------CCEEEEEECCH-HHHHHHHHHhhccCCceEEEEccccc
Confidence 44679999999999999877531 01233333321 11111111110000112234445555
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+++++.++||+.. ...+|+.-.+-|+|||++++
T Consensus 98 ~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 139 (263)
T 2yqz_A 98 IPLPDESVHGVIVVHLWHLVPD--------------------------------------WPKVLAEAIRVLKPGGALLE 139 (263)
T ss_dssp CCSCTTCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeeEEEECCchhhcCC--------------------------------------HHHHHHHHHHHCCCCcEEEE
Confidence 5578899999999999999753 12355566678999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHh-hccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC-CCC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANE-QLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN-PTS 265 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~e-Gli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~-p~~ 265 (332)
.+...+ . ...+ .+...|..+... |. + ...+.++++.+++++++++.| |++...+... +..
T Consensus 140 ~~~~~~-~--------~~~~-~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~~ 201 (263)
T 2yqz_A 140 GWDQAE-A--------SPEW-TLQERWRAFAAEEGF-P------VERGLHAKRLKEVEEALRRLG-LKPRTREVARWREE 201 (263)
T ss_dssp EEEEEC-C--------CHHH-HHHHHHHHHHHHHTC-C------CCCCHHHHHHHHHHHHHHHTT-CCCEEEEEEEEEEE
T ss_pred EecCCC-c--------cHHH-HHHHHHHHHHHHhCC-C------cccccccCCHHHHHHHHHHcC-CCcceEEEeeeecC
Confidence 944321 1 0101 122333332221 21 1 122456788999999999999 9987776553 221
Q ss_pred CCCCCccHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHHHHHhchh
Q 044174 266 WLEGPIDIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIRRLFEFSD 313 (332)
Q Consensus 266 ~~~~~~~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~~v~~~l~ 313 (332)
...+.+..++++.+.+.+. +++++..+++.+++.+.+.+...
T Consensus 202 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 243 (263)
T 2yqz_A 202 -----RTPREALEALSERLYSFTQ-GLPEPVHARVMERLWAWAEAELG 243 (263)
T ss_dssp -----ECHHHHHHHHHTTCSGGGS-SSCHHHHHHHHHHHHHHHHHHSS
T ss_pred -----CCHHHHHHHHHHhhccccc-CCCHHHHHHHHHHHHHHHHHhcC
Confidence 1235677777766666554 68888899999999988887654
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.24 E-value=1.6e-09 Score=98.67 Aligned_cols=196 Identities=11% Similarity=0.037 Sum_probs=112.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-ccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~~vpgSF 105 (332)
....+|+|+|||+|..+..+++.. ..+|+--|+-. ......+.. ... ..--+..+.+++
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~------------------~~~v~gvD~s~-~~~~~a~~~~~~~~~~~~~~~~~~d~ 120 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR------------------DVRVTGISISR-PQVNQANARATAAGLANRVTFSYADA 120 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS------------------CCEEEEEESCH-HHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc------------------CCEEEEEeCCH-HHHHHHHHHHHhcCCCcceEEEECcc
Confidence 345799999999999998876421 01223333211 111111110 000 001123345566
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
....+|++++|+|+|+.++||+... ..+|+.-++-|+|||++
T Consensus 121 ~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~pgG~l 162 (273)
T 3bus_A 121 MDLPFEDASFDAVWALESLHHMPDR--------------------------------------GRALREMARVLRPGGTV 162 (273)
T ss_dssp TSCCSCTTCEEEEEEESCTTTSSCH--------------------------------------HHHHHHHHTTEEEEEEE
T ss_pred ccCCCCCCCccEEEEechhhhCCCH--------------------------------------HHHHHHHHHHcCCCeEE
Confidence 6656788999999999999997431 24666777889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCCCC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNPTS 265 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~ 265 (332)
++......+... . .....+..+.. .+. ..++++.+++++++++.| |++..++.+.+..
T Consensus 163 ~i~~~~~~~~~~------~----~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~ 220 (273)
T 3bus_A 163 AIADFVLLAPVE------G----AKKEAVDAFRA----------GGG-VLSLGGIDEYESDVRQAE-LVVTSTVDISAQA 220 (273)
T ss_dssp EEEEEEESSCCC------H----HHHHHHHHHHH----------HHT-CCCCCCHHHHHHHHHHTT-CEEEEEEECHHHH
T ss_pred EEEEeeccCCCC------h----hHHHHHHHHHh----------hcC-ccCCCCHHHHHHHHHHcC-CeEEEEEECcHhH
Confidence 998776543211 1 11112222110 011 235789999999999999 9998888764211
Q ss_pred CCCCCccHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHHH
Q 044174 266 WLEGPIDIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIRR 307 (332)
Q Consensus 266 ~~~~~~~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~~ 307 (332)
.. .-..+...+++....+ ...+|++..+.+.+.+...
T Consensus 221 ~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 257 (273)
T 3bus_A 221 RP----SLVKTAEAFENARSQV-EPFMGAEGLDRMIATFRGL 257 (273)
T ss_dssp TT----HHHHHHHHHHHTHHHH-HHHHCHHHHHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHhHHHH-HhhcCHHHHHHHHHHHHHH
Confidence 10 1123333333333333 3467887777776666653
No 8
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.16 E-value=1.1e-09 Score=97.49 Aligned_cols=168 Identities=13% Similarity=0.133 Sum_probs=106.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..+..+.+.. |..+|+.-|+-..-....-+.++... -+..+.+++..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~ 103 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY-----------------PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSK 103 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-----------------CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhc
Confidence 456899999999999987765421 23455555553221111111222211 23445567766
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
..++ +++|+++++.++||++. .+...+|+.-++-|+|||++++
T Consensus 104 ~~~~-~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 104 YDFE-EKYDMVVSALSIHHLED------------------------------------EDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CCCC-SCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCC-CCceEEEEeCccccCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 6666 89999999999999732 1223456666688999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhccc---CcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSF---NLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~f---n~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
.....++. ..........|.....++-.+.+++..+ .--.+.++.+|+++++++.| |++.++..
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~~ 213 (234)
T 3dtn_A 147 ADLVHGET--------AFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCIY 213 (234)
T ss_dssp EEECBCSS--------HHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEEE
T ss_pred EEecCCCC--------hhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeeee
Confidence 87765432 2233455566766666555555544421 12235578999999999999 99877664
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.14 E-value=6e-09 Score=93.97 Aligned_cols=194 Identities=11% Similarity=0.054 Sum_probs=112.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.... . .+|+--|+-. +.....+...... .-+..+.+++..
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~-----------------~~v~~vD~s~-~~~~~a~~~~~~~-~~~~~~~~d~~~ 113 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-G-----------------AHTHGIDICS-NIVNMANERVSGN-NKIIFEANDILT 113 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-C-----------------CEEEEEESCH-HHHHHHHHTCCSC-TTEEEEECCTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-C-----------------CEEEEEeCCH-HHHHHHHHHhhcC-CCeEEEECcccc
Confidence 446799999999999998876532 0 1233333211 1111112111110 122334455555
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
..+|++++|+|+|+.++||++. .|...+|+.-.+-|+|||++++
T Consensus 114 ~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 114 KEFPENNFDLIYSRDAILALSL------------------------------------ENKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp CCCCTTCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCcEEEEeHHHHHHhcCh------------------------------------HHHHHHHHHHHHHcCCCCEEEE
Confidence 5678999999999999999631 2455677777788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCCCCCC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNPTSWL 267 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~~~ 267 (332)
.....+..... . ..+...+. .. ...+++.+++++++++.| |++...+.+.+.
T Consensus 158 ~~~~~~~~~~~-----~---~~~~~~~~---~~-------------~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~--- 209 (266)
T 3ujc_A 158 TDYCATEKENW-----D---DEFKEYVK---QR-------------KYTLITVEEYADILTACN-FKNVVSKDLSDY--- 209 (266)
T ss_dssp EEEEESCGGGC-----C---HHHHHHHH---HH-------------TCCCCCHHHHHHHHHHTT-CEEEEEEECHHH---
T ss_pred EEeccCCcccc-----h---HHHHHHHh---cC-------------CCCCCCHHHHHHHHHHcC-CeEEEEEeCCHH---
Confidence 98765441111 1 11111111 11 234678999999999999 998887755311
Q ss_pred CCCccHHHHHHHHHHHHh--hHHHhhhCHHHHHHHHHHHHHHHH
Q 044174 268 EGPIDIKAWTMHVRAAME--AMFSKHFRIEIIDEMFNRLIRRLF 309 (332)
Q Consensus 268 ~~~~~~~~~a~~iRa~~e--pll~~hfg~~i~delf~r~~~~v~ 309 (332)
+...+..|.+.+.. .-+.+.++++..+.+.+.....+.
T Consensus 210 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (266)
T 3ujc_A 210 ----WNQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIK 249 (266)
T ss_dssp ----HHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHhCHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 12334445444322 112234666666655555555544
No 10
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.14 E-value=6.8e-09 Score=93.58 Aligned_cols=211 Identities=14% Similarity=0.184 Sum_probs=115.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
+...+|+|+|||+|..++.+.+.. +. +|+-.|+-.. .-...+.. .... .--+..+.+++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~-~v~~vD~s~~-~~~~a~~~~~~~~~~~~~~~~~~d~ 105 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYV-----------------KG-QITGIDLFPD-FIEIFNENAVKANCADRVKGITGSM 105 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHC-----------------CS-EEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhC-----------------CC-eEEEEECCHH-HHHHHHHHHHHcCCCCceEEEECCh
Confidence 445699999999999998875431 11 3333333211 11111111 0000 01123344555
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..-.+|++++|+++|+.++||+ . + ..+|+.-.+-|+|||++
T Consensus 106 ~~~~~~~~~fD~v~~~~~l~~~-~-~-------------------------------------~~~l~~~~~~L~pgG~l 146 (257)
T 3f4k_A 106 DNLPFQNEELDLIWSEGAIYNI-G-F-------------------------------------ERGMNEWSKYLKKGGFI 146 (257)
T ss_dssp TSCSSCTTCEEEEEEESCSCCC-C-H-------------------------------------HHHHHHHHTTEEEEEEE
T ss_pred hhCCCCCCCEEEEEecChHhhc-C-H-------------------------------------HHHHHHHHHHcCCCcEE
Confidence 5555788999999999999996 1 1 12455556789999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCCCC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNPTS 265 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~ 265 (332)
++........... ..+...|... .| ..++.+++.+++++.| |++...+.+....
T Consensus 147 ~~~~~~~~~~~~~---------~~~~~~~~~~---------------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~ 200 (257)
T 3f4k_A 147 AVSEASWFTSERP---------AEIEDFWMDA---------------YP-EISVIPTCIDKMERAG-YTPTAHFILPENC 200 (257)
T ss_dssp EEEEEEESSSCCC---------HHHHHHHHHH---------------CT-TCCBHHHHHHHHHHTT-EEEEEEEECCGGG
T ss_pred EEEEeeccCCCCh---------HHHHHHHHHh---------------CC-CCCCHHHHHHHHHHCC-CeEEEEEECChhh
Confidence 9997653332211 1223333321 12 2578999999999999 9998876654223
Q ss_pred CCCCCccHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHHHHHhchhhhhcCCcceEEEEEEEEeC
Q 044174 266 WLEGPIDIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIRRLFEFSDKVESGYKEKTQLFVILMRK 332 (332)
Q Consensus 266 ~~~~~~~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~~v~~~l~~~~~~~~~~~~~~~~L~r~ 332 (332)
|.+. +...+. ...+.+...+-+....+++.++..+..... .. ....+-..+++++|+
T Consensus 201 w~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 201 WTEH--YFAPQD----EVRETFMKEHAGNKTAMDFMKGQQYERSLY-SK---YKDYYGYVFYIGQKR 257 (257)
T ss_dssp TCCC--CCHHHH----HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HH---HTTTEEEEEEEEEEC
T ss_pred HHHH--HHHHHH----HHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HH---hCCccceEEEEEecC
Confidence 3211 111222 222233333444455555555555554433 22 123345566777764
No 11
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.09 E-value=1.2e-08 Score=94.93 Aligned_cols=212 Identities=11% Similarity=0.076 Sum_probs=112.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
....+|+|+|||+|..++.+++.. + .+|+--|+-.+ .-...+.. .... +--+..+-+++
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~-----------------~-~~v~gvD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~ 131 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEY-----------------D-VNVIGLTLSEN-QYAHDKAMFDEVDSPRRKEVRIQGW 131 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----------------C-CEEEEEECCHH-HHHHHHHHHHHSCCSSCEEEEECCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhC-----------------C-CEEEEEECCHH-HHHHHHHHHHhcCCCCceEEEECCH
Confidence 445799999999999998876531 0 12222332111 01111110 0000 00111222333
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.. + ++++|+++|+.++|++..... . .| .+++..+|+.-.+-|+|||++
T Consensus 132 ~~-~--~~~fD~v~~~~~~~~~~d~~~-~---------~~-------------------~~~~~~~l~~~~~~LkpgG~l 179 (302)
T 3hem_A 132 EE-F--DEPVDRIVSLGAFEHFADGAG-D---------AG-------------------FERYDTFFKKFYNLTPDDGRM 179 (302)
T ss_dssp GG-C--CCCCSEEEEESCGGGTTCCSS-C---------CC-------------------TTHHHHHHHHHHHSSCTTCEE
T ss_pred HH-c--CCCccEEEEcchHHhcCcccc-c---------cc-------------------hhHHHHHHHHHHHhcCCCcEE
Confidence 22 2 679999999999999765321 0 00 135667888888999999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCc-ccCCHHHHHHHHHhCCceEEeEEEEeCCC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPI-YSASSEEMVKLVDKNGHFSIKTVELTNPT 264 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-y~ps~~E~~~~ie~~G~F~I~~le~~~p~ 264 (332)
++......+...... .+..+..-...+.+... .+.+|. +.|+.+++.+.+++.| |++..++.+.+
T Consensus 180 ~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~p~~~~~s~~~~~~~l~~aG-f~~~~~~~~~~- 245 (302)
T 3hem_A 180 LLHTITIPDKEEAQE--LGLTSPMSLLRFIKFIL----------TEIFPGGRLPRISQVDYYSSNAG-WKVERYHRIGA- 245 (302)
T ss_dssp EEEEEECCCHHHHHH--HTCCCCHHHHHHHHHHH----------HHTCTTCCCCCHHHHHHHHHHHT-CEEEEEEECGG-
T ss_pred EEEEEeccCccchhh--ccccccccccchHHHHH----------HhcCCCCCCCCHHHHHHHHHhCC-cEEEEEEeCch-
Confidence 999877543110000 00000000001111111 122443 7899999999999999 99999886532
Q ss_pred CCCCCCccHHHHHHHHHHHHhh--HHHhhhCHHHHHHHHHHHHHHHHhc
Q 044174 265 SWLEGPIDIKAWTMHVRAAMEA--MFSKHFRIEIIDEMFNRLIRRLFEF 311 (332)
Q Consensus 265 ~~~~~~~~~~~~a~~iRa~~ep--ll~~hfg~~i~delf~r~~~~v~~~ 311 (332)
.+++.+..|.+.+.+. -+.+.++++..+ .++.|-...+..
T Consensus 246 ------~y~~tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~ 287 (302)
T 3hem_A 246 ------NYVPTLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDL 287 (302)
T ss_dssp ------GHHHHHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHH
T ss_pred ------hHHHHHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHH
Confidence 2345566665554432 222346655443 344444444433
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.06 E-value=4.7e-08 Score=89.02 Aligned_cols=170 Identities=17% Similarity=0.163 Sum_probs=99.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-ccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~~vpgSF 105 (332)
+...+|+|+|||+|..++.+++. +..+|+-.|+-.. .-...+.. ... .+--+..+.+++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~------------------~~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH------------------VTGQVTGLDFLSG-FIDIFNRNARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT------------------CSSEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc------------------cCCEEEEEeCCHH-HHHHHHHHHHHcCCCcCcEEEEcCh
Confidence 45689999999999998876531 1234444443221 11111111 000 001122344555
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..-.+|++++|+|+|+.++|++ . | ..+|+.-.+-|+|||++
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~-~-~-------------------------------------~~~l~~~~~~LkpgG~l 146 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNI-G-F-------------------------------------ERGLNEWRKYLKKGGYL 146 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGT-C-H-------------------------------------HHHHHHHGGGEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceec-C-H-------------------------------------HHHHHHHHHHcCCCCEE
Confidence 5555788999999999999996 2 2 12556666789999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCCCC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNPTS 265 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~ 265 (332)
++........... ..+...|.+ . .| .+++.+++.+.+++.| |++..++.+....
T Consensus 147 ~~~~~~~~~~~~~---------~~~~~~~~~----~-----------~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~~~~ 200 (267)
T 3kkz_A 147 AVSECSWFTDERP---------AEINDFWMD----A-----------YP-EIDTIPNQVAKIHKAG-YLPVATFILPENC 200 (267)
T ss_dssp EEEEEEESSSCCC---------HHHHHHHHH----H-----------CT-TCEEHHHHHHHHHHTT-EEEEEEEECCGGG
T ss_pred EEEEeeecCCCCh---------HHHHHHHHH----h-----------CC-CCCCHHHHHHHHHHCC-CEEEEEEECCHhH
Confidence 9987654322211 122333321 1 13 4679999999999999 9998887765333
Q ss_pred CCCCCccHHHHHHHHHHH
Q 044174 266 WLEGPIDIKAWTMHVRAA 283 (332)
Q Consensus 266 ~~~~~~~~~~~a~~iRa~ 283 (332)
+. +.+...+..|++.+
T Consensus 201 w~--~~~~~~~~~~~~~~ 216 (267)
T 3kkz_A 201 WT--DHYFTPKVAAQKIF 216 (267)
T ss_dssp TT--TTTHHHHHHHHHHH
T ss_pred HH--HHHHHHHHHHHHHH
Confidence 32 12334444454444
No 13
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.03 E-value=2.8e-09 Score=93.87 Aligned_cols=157 Identities=15% Similarity=0.144 Sum_probs=97.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+. ..+|+.-|.-.. .....+.... .-+..+.+++..-
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~-------------------~~~v~~vD~s~~-~~~~a~~~~~---~~~~~~~~d~~~~ 101 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA-------------------GRTVYGIEPSRE-MRMIAKEKLP---KEFSITEGDFLSF 101 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT-------------------TCEEEEECSCHH-HHHHHHHHSC---TTCCEESCCSSSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC-------------------CCeEEEEeCCHH-HHHHHHHhCC---CceEEEeCChhhc
Confidence 3579999999999988776542 123444444221 1111211111 1123345666666
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.++ +++|+++|+.++||+... +...+|+.-.+-|+|||++++.
T Consensus 102 ~~~-~~fD~v~~~~~l~~~~~~------------------------------------~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 102 EVP-TSIDTIVSTYAFHHLTDD------------------------------------EKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp CCC-SCCSEEEEESCGGGSCHH------------------------------------HHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCC-CCeEEEEECcchhcCChH------------------------------------HHHHHHHHHHHhcCCCCEEEEE
Confidence 667 999999999999996431 1123666667889999999999
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.....+. ......+..+...|.... ..-..++++++.+++++++++.| |+|...+..
T Consensus 145 ~~~~~~~------------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 201 (220)
T 3hnr_A 145 DTIFADQ------------DAYDKTVEAAKQRGFHQL---ANDLQTEYYTRIPVMQTIFENNG-FHVTFTRLN 201 (220)
T ss_dssp EECBSSH------------HHHHHHHHHHHHTTCHHH---HHHHHHSCCCBHHHHHHHHHHTT-EEEEEEECS
T ss_pred eccccCh------------HHHHHHHHHHHhCCCccc---hhhcchhhcCCHHHHHHHHHHCC-CEEEEeecc
Confidence 7554331 122333333444443211 11123567889999999999999 999887743
No 14
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.03 E-value=7.8e-09 Score=91.32 Aligned_cols=172 Identities=14% Similarity=0.123 Sum_probs=99.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-----cceeeec
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-----EYYSAGV 101 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-----~~f~~~v 101 (332)
++..+|+|+|||+|..++.+.+. ..+|+..|.-..= -...+. +.... .-.+..+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-------------------~~~v~~vD~s~~~-~~~a~~~~~~~~~~~~~~~~~~~~ 88 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-------------------GYSVTGIDINSEA-IRLAETAARSPGLNQKTGGKAEFK 88 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-------------------TCEEEEEESCHHH-HHHHHHHTTCCSCCSSSSCEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-------------------CCeEEEEECCHHH-HHHHHHHHHhcCCccccCcceEEE
Confidence 45679999999999998877542 0123333332111 111111 11100 1123334
Q ss_pred CCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044174 102 PGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS 181 (332)
Q Consensus 102 pgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p 181 (332)
-+.+..-.+|++++|+++++.++|++... .++..+|+.-.+-|+|
T Consensus 89 ~~d~~~~~~~~~~~D~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~p 133 (235)
T 3sm3_A 89 VENASSLSFHDSSFDFAVMQAFLTSVPDP-----------------------------------KERSRIIKEVFRVLKP 133 (235)
T ss_dssp ECCTTSCCSCTTCEEEEEEESCGGGCCCH-----------------------------------HHHHHHHHHHHHHEEE
T ss_pred EecccccCCCCCceeEEEEcchhhcCCCH-----------------------------------HHHHHHHHHHHHHcCC
Confidence 45555556789999999999999996541 1233567777788999
Q ss_pred CCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcc--cCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 182 GGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDS--FNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 182 GG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~--fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
||++++...+..... ..........+......|......... .....++++.+|+++++++.| |++..++
T Consensus 134 gG~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~~~ 205 (235)
T 3sm3_A 134 GAYLYLVEFGQNWHL-------KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDYFR 205 (235)
T ss_dssp EEEEEEEEEBCCTTS-------HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEEEE
T ss_pred CeEEEEEECCcchhH-------HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEEEE
Confidence 999999987764321 111122222222221222211110010 122356789999999999999 9999988
Q ss_pred EeC
Q 044174 260 LTN 262 (332)
Q Consensus 260 ~~~ 262 (332)
...
T Consensus 206 ~~~ 208 (235)
T 3sm3_A 206 VKE 208 (235)
T ss_dssp EEE
T ss_pred ecc
Confidence 655
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=3e-09 Score=92.71 Aligned_cols=143 Identities=13% Similarity=0.042 Sum_probs=95.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~l 109 (332)
..+|+|+|||+|..+..+.+. + .+|+--|.-. +.-...+.... -+.-+-+++..-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~------------~-------~~v~gvD~s~-~~~~~a~~~~~----~~~~~~~d~~~~~ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL------------G-------HQIEGLEPAT-RLVELARQTHP----SVTFHHGTITDLS 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT------------T-------CCEEEECCCH-HHHHHHHHHCT----TSEEECCCGGGGG
T ss_pred CCeEEEecCCCCHHHHHHHhc------------C-------CeEEEEeCCH-HHHHHHHHhCC----CCeEEeCcccccc
Confidence 578999999999988776542 0 1233344311 11111111111 1223455666666
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+++++.++|++.. .|...+|+.-++-|+|||++++..
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 98 DSPKRWAGLLAWYSLIHMGP------------------------------------GELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp GSCCCEEEEEEESSSTTCCT------------------------------------TTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCCeEEEEehhhHhcCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEE
Confidence 78999999999999999752 123456777778899999999998
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCC
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNP 263 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p 263 (332)
....... .++....+.++.+.+|+++++++.| |++..++.+.+
T Consensus 142 ~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 142 FSGPSLE------------------------------PMYHPVATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp ECCSSCE------------------------------EECCSSSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred ccCCchh------------------------------hhhchhhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 7654311 1122234677889999999999999 99999998763
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.00 E-value=9.1e-09 Score=94.67 Aligned_cols=164 Identities=12% Similarity=0.160 Sum_probs=95.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
++..+|+|+|||+|..+..+... ..+|+-.|.-.. .-...+.. .... .--+..+-+++
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~-------------------~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~ 126 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER-------------------GHQVILCDLSAQ-MIDRAKQAAEAKGVSDNMQFIHCAA 126 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-------------------TCEEEEEESCHH-HHHHHHHHHHC-CCGGGEEEEESCG
T ss_pred CCCCEEEEeCCcchHHHHHHHHC-------------------CCEEEEEECCHH-HHHHHHHHHHhcCCCcceEEEEcCH
Confidence 34679999999999988877542 012333333211 11111111 0000 01122344455
Q ss_pred ccCC-cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 106 HHRL-FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 106 y~~l-fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
.... ++++++|+|+++.++||+... ..+|+.-++-|+|||+
T Consensus 127 ~~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~LkpgG~ 168 (285)
T 4htf_A 127 QDVASHLETPVDLILFHAVLEWVADP--------------------------------------RSVLQTLWSVLRPGGV 168 (285)
T ss_dssp GGTGGGCSSCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHTEEEEEE
T ss_pred HHhhhhcCCCceEEEECchhhcccCH--------------------------------------HHHHHHHHHHcCCCeE
Confidence 5544 688999999999999997431 2356666788999999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
+++........ .....+...|.. ...+..... .....+.++.+.+|+++++++.| |++...+.+.
T Consensus 169 l~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~aG-f~v~~~~~~~ 233 (285)
T 4htf_A 169 LSLMFYNAHGL---------LMHNMVAGNFDY-VQAGMPKKK--KRTLSPDYPRDPTQVYLWLEEAG-WQIMGKTGVR 233 (285)
T ss_dssp EEEEEEBHHHH---------HHHHHHTTCHHH-HHTTCCCC------CCCSCCBCHHHHHHHHHHTT-CEEEEEEEES
T ss_pred EEEEEeCCchH---------HHHHHHhcCHHH-Hhhhccccc--cccCCCCCCCCHHHHHHHHHHCC-CceeeeeeEE
Confidence 99998764320 011111111221 122222111 11224567789999999999999 9999998775
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.97 E-value=1.3e-08 Score=93.89 Aligned_cols=165 Identities=12% Similarity=0.174 Sum_probs=89.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
++.-+|+|+|||+|..++.+.+. + ..+..+|+--|+-. +.-...+.. .... ..-+.-+-|.+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~--------~-------~~~~~~v~gvD~s~-~ml~~A~~~~~~~~~~~~v~~~~~D~ 132 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRN--------I-------HHDNCKIIAIDNSP-AMIERCRRHIDAYKAPTPVDVIEGDI 132 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--------C-------CSSSCEEEEEESCH-HHHHHHHHHHHTSCCSSCEEEEESCT
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh--------c-------CCCCCEEEEEECCH-HHHHHHHHHHHhhccCceEEEeeccc
Confidence 45679999999999998776431 1 12234444444321 111222211 1100 11122233444
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.+ +|-+++|+++|+++|||+.. .|...+|+.-++-|+|||+|
T Consensus 133 ~~--~~~~~~d~v~~~~~l~~~~~------------------------------------~~~~~~l~~i~~~LkpGG~l 174 (261)
T 4gek_A 133 RD--IAIENASMVVLNFTLQFLEP------------------------------------SERQALLDKIYQGLNPGGAL 174 (261)
T ss_dssp TT--CCCCSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred cc--ccccccccceeeeeeeecCc------------------------------------hhHhHHHHHHHHHcCCCcEE
Confidence 33 34557999999999999642 13345677777889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHH-hhccchhh---hcccCcCcccCCHHHHHHHHHhCCceEE
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELAN-EQLITEAE---LDSFNLPIYSASSEEMVKLVDKNGHFSI 255 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~-eGli~~e~---~d~fn~P~y~ps~~E~~~~ie~~G~F~I 255 (332)
++.-...... ....+.+...+.+... .|+-+.+- ...........|.+|+++.+++.| |+.
T Consensus 175 ii~e~~~~~~--------~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AG-F~~ 239 (261)
T 4gek_A 175 VLSEKFSFED--------AKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAG-FEH 239 (261)
T ss_dssp EEEEEBCCSS--------HHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHT-CSE
T ss_pred EEEeccCCCC--------HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcC-CCe
Confidence 9975443321 1122333333333322 24322111 011111233468999999999999 863
No 18
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.97 E-value=2.2e-07 Score=85.30 Aligned_cols=116 Identities=12% Similarity=0.129 Sum_probs=68.2
Q ss_pred CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 113 SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 113 ~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
+++|+|+|..++|++.. .|+..+|+.-.+-|+|||++++.....
T Consensus 128 ~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFGH------------------------------------ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CCCSEEEEESCGGGTCT------------------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CCeeEEEEeCchhhcCh------------------------------------HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 78999999999999743 123346666678899999999998765
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcC-cccCCHHHHHHHHHhCCceEEeEEEEeCCCCCCCCCc
Q 044174 193 PYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLP-IYSASSEEMVKLVDKNGHFSIKTVELTNPTSWLEGPI 271 (332)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~~~~~~~ 271 (332)
.+.......+...... ...+.+.....+ .| ...||.+++.+++++.| |++..++.+.+ .
T Consensus 172 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~----------~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~~~-------~ 231 (287)
T 1kpg_A 172 LHPKEIHERGLPMSFT--FARFLKFIVTEI----------FPGGRLPSIPMVQECASANG-FTVTRVQSLQP-------H 231 (287)
T ss_dssp CCHHHHTTTTCSCHHH--HHHHHHHHHHHT----------STTCCCCCHHHHHHHHHTTT-CEEEEEEECHH-------H
T ss_pred CCcccccccccccccc--ccchhhhHHhee----------CCCCCCCCHHHHHHHHHhCC-cEEEEEEeCcH-------h
Confidence 4311000000000000 011111111111 12 25679999999999999 99988875532 1
Q ss_pred cHHHHHHHHHHHH
Q 044174 272 DIKAWTMHVRAAM 284 (332)
Q Consensus 272 ~~~~~a~~iRa~~ 284 (332)
++..+..|.+.+.
T Consensus 232 y~~~~~~w~~~~~ 244 (287)
T 1kpg_A 232 YAKTLDLWSAALQ 244 (287)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3345555655443
No 19
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.93 E-value=1.7e-07 Score=85.23 Aligned_cols=168 Identities=7% Similarity=-0.034 Sum_probs=95.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCc-----hHHHHhcC-cccc-cceeee
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSND-----FNTLFTSL-PQQR-EYYSAG 100 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~ND-----Fn~lf~~l-~~~~-~~f~~~ 100 (332)
....+|+|+|||+|..++.+.... .|..+|+--|+-... .-...+.. .... .--+..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~----------------g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~ 105 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQV----------------GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTV 105 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH----------------CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh----------------CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEE
Confidence 445799999999999988765421 123466666765541 22222221 1110 011223
Q ss_pred cCCc-cc--cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 044174 101 VPGS-FH--HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAE 177 (332)
Q Consensus 101 vpgS-Fy--~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~ 177 (332)
+.++ +. ...+|++++|+++|+.++|++.... .+++....
T Consensus 106 ~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~~~~~~~ 147 (275)
T 3bkx_A 106 HFNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN--------------------------------------ALALLFKN 147 (275)
T ss_dssp ECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH--------------------------------------HHHHHHHH
T ss_pred EECChhhhccCCCCCCCEEEEEEccchhhCCCHH--------------------------------------HHHHHHHH
Confidence 3443 33 3346789999999999999965411 13333334
Q ss_pred hhccCCeEEEEecccCCCCCCCCcchhHHHHHHHH-HHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEe
Q 044174 178 EIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMAT-IFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIK 256 (332)
Q Consensus 178 EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~-al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~ 256 (332)
-++|||++++........... ....++..+.. .+... ..+.....+.++|.+++++++++.| |++.
T Consensus 148 l~~~gG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~s~~~l~~~l~~aG-f~~~ 214 (275)
T 3bkx_A 148 MAAVCDHVDVAEWSMQPTALD---QIGHLQAAMIQGLLYAI---------APSDVANIRTLITPDTLAQIAHDNT-WTYT 214 (275)
T ss_dssp HTTTCSEEEEEEECSSCSSGG---GHHHHHHHHHHHHHHHH---------SCCTTCSCCCCCCHHHHHHHHHHHT-CEEE
T ss_pred HhCCCCEEEEEEecCCCCchh---hhhHHHHHHHHHHHhhc---------cccccccccccCCHHHHHHHHHHCC-CeeE
Confidence 455699999987765433210 11111111111 11111 0112234556899999999999999 9998
Q ss_pred EEEEeC
Q 044174 257 TVELTN 262 (332)
Q Consensus 257 ~le~~~ 262 (332)
+.+.+.
T Consensus 215 ~~~~~~ 220 (275)
T 3bkx_A 215 AGTIVE 220 (275)
T ss_dssp ECCCBC
T ss_pred EEEEec
Confidence 888664
No 20
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.93 E-value=1.8e-08 Score=93.50 Aligned_cols=159 Identities=11% Similarity=0.105 Sum_probs=88.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCc-c---cccceeeecCC
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLP-Q---QREYYSAGVPG 103 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~-~---~~~~f~~~vpg 103 (332)
....+|+|+|||+|..|+.++..+.. .+. .-.+.+...|. +-+.-...+... . ..++-+.-..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~----~~~-------~~~v~~~~vD~-S~~ml~~a~~~~~~~~~~~~v~~~~~~~ 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQA----QYP-------GVCINNEVVEP-SAEQIAKYKELVAKTSNLENVKFAWHKE 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHH----HST-------TCEEEEEEECS-CHHHHHHHHHHHHTCSSCTTEEEEEECS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHh----hCC-------CceeeEEEEeC-CHHHHHHHHHHHHhccCCCcceEEEEec
Confidence 45689999999999877665544322 110 01123355553 222222222211 0 01111111122
Q ss_pred cccc------CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 044174 104 SFHH------RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAE 177 (332)
Q Consensus 104 SFy~------~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~ 177 (332)
..-. +-|+++++|+|+|+.+|||+... ..+|+.-++
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~--------------------------------------~~~l~~~~r 160 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDI--------------------------------------PATLKFFHS 160 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHH
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecCCH--------------------------------------HHHHHHHHH
Confidence 2211 12678999999999999997542 234555667
Q ss_pred hhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeE
Q 044174 178 EIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKT 257 (332)
Q Consensus 178 EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~ 257 (332)
-|||||++++....... .| ...|..... . +. ..-...+++.+++.+++++.| |++..
T Consensus 161 ~LkpgG~l~i~~~~~~~-----------~~---~~~~~~~~~-~-~~------~~~~~~~~~~~~~~~~l~~aG-f~~~~ 217 (292)
T 2aot_A 161 LLGTNAKMLIIVVSGSS-----------GW---DKLWKKYGS-R-FP------QDDLCQYITSDDLTQMLDNLG-LKYEC 217 (292)
T ss_dssp TEEEEEEEEEEEECTTS-----------HH---HHHHHHHGG-G-SC------CCTTCCCCCHHHHHHHHHHHT-CCEEE
T ss_pred HcCCCcEEEEEEecCCc-----------cH---HHHHHHHHH-h-cc------CCCcccCCCHHHHHHHHHHCC-CceEE
Confidence 88999999998754321 11 122222211 1 10 001235688999999999999 98876
Q ss_pred EE
Q 044174 258 VE 259 (332)
Q Consensus 258 le 259 (332)
.+
T Consensus 218 ~~ 219 (292)
T 2aot_A 218 YD 219 (292)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 21
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.93 E-value=1.6e-07 Score=86.59 Aligned_cols=152 Identities=14% Similarity=0.046 Sum_probs=93.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcc--cccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQ--QREYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~~vpgSF 105 (332)
....+|+|+|||+|..+..+++.. + .+|+.-|+.. ......+.... ...--+..+.+++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~-----------~-------~~v~gvD~s~-~~~~~a~~~~~~~~~~~~~~~~~~d~ 141 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF-----------G-------VSIDCLNIAP-VQNKRNEEYNNQAGLADNITVKYGSF 141 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-----------C-------CEEEEEESCH-HHHHHHHHHHHHHTCTTTEEEEECCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh-----------C-------CEEEEEeCCH-HHHHHHHHHHHhcCCCcceEEEEcCc
Confidence 446799999999999998775431 0 1333334321 11111111100 0001133345666
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..-.+|++++|+|+|+.++||+.. | ..+|+.-.+-|+|||++
T Consensus 142 ~~~~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~LkpgG~l 183 (297)
T 2o57_A 142 LEIPCEDNSYDFIWSQDAFLHSPD-K-------------------------------------LKVFQECARVLKPRGVM 183 (297)
T ss_dssp TSCSSCTTCEEEEEEESCGGGCSC-H-------------------------------------HHHHHHHHHHEEEEEEE
T ss_pred ccCCCCCCCEeEEEecchhhhcCC-H-------------------------------------HHHHHHHHHHcCCCeEE
Confidence 666788999999999999999654 1 13566666788999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++......+.... . .+...+.. +..| .+++.+++++++++.| |++..++.+
T Consensus 184 ~~~~~~~~~~~~~-----~----~~~~~~~~--------------~~~~-~~~~~~~~~~~l~~aG-f~~~~~~~~ 234 (297)
T 2o57_A 184 AITDPMKEDGIDK-----S----SIQPILDR--------------IKLH-DMGSLGLYRSLAKECG-LVTLRTFSR 234 (297)
T ss_dssp EEEEEEECTTCCG-----G----GGHHHHHH--------------HTCS-SCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred EEEEeccCCCCch-----H----HHHHHHHH--------------hcCC-CCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 9998765442210 1 11111111 1123 3579999999999999 998887755
No 22
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.91 E-value=4.5e-09 Score=94.31 Aligned_cols=146 Identities=14% Similarity=0.149 Sum_probs=92.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+.+. + .+|+-.|+-. +.-...+.. +..+.+....
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~------------~-------~~v~gvD~s~-~~~~~a~~~-------~~~~~~d~~~ 92 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE------------G-------IESIGVDINE-DMIKFCEGK-------FNVVKSDAIE 92 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH------------T-------CCEEEECSCH-HHHHHHHTT-------SEEECSCHHH
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC------------C-------CcEEEEECCH-HHHHHHHhh-------cceeeccHHH
Confidence 44679999999999988765432 0 1233334311 111111111 2233444443
Q ss_pred C--CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 108 R--LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 108 ~--lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
- .+|++++|+|+|+.++||+.. .|+..+|+.-.+-|+|||++
T Consensus 93 ~~~~~~~~~fD~i~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l 136 (240)
T 3dli_A 93 YLKSLPDKYLDGVMISHFVEHLDP------------------------------------ERLFELLSLCYSKMKYSSYI 136 (240)
T ss_dssp HHHTSCTTCBSEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHHBCTTCCE
T ss_pred HhhhcCCCCeeEEEECCchhhCCc------------------------------------HHHHHHHHHHHHHcCCCcEE
Confidence 2 578999999999999999752 13445777777899999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCCC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNPT 264 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p~ 264 (332)
++...+..+ ... +.+. .+ ..--.++++.++++.++++.| |++..++.+.|.
T Consensus 137 ~~~~~~~~~-----------~~~-----~~~~----~~-------~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 187 (240)
T 3dli_A 137 VIESPNPTS-----------LYS-----LINF----YI-------DPTHKKPVHPETLKFILEYLG-FRDVKIEFFEEC 187 (240)
T ss_dssp EEEEECTTS-----------HHH-----HHHH----TT-------STTCCSCCCHHHHHHHHHHHT-CEEEEEEEECCC
T ss_pred EEEeCCcch-----------hHH-----HHHH----hc-------CccccccCCHHHHHHHHHHCC-CeEEEEEEeccC
Confidence 998876322 111 1110 11 111235678899999999999 999999988754
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.89 E-value=2e-08 Score=91.08 Aligned_cols=155 Identities=14% Similarity=0.205 Sum_probs=89.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccccc-ceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQRE-YYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~-~f~~~vpgSFy 106 (332)
....+|+|+|||+|..+..+.+. .+ +|+..|+-. +.-...+....... --+..+.+++.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~-----------------~~--~v~gvD~s~-~~l~~a~~~~~~~~~~~v~~~~~d~~ 95 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPF-----------------VK--KVVAFDLTE-DILKVARAFIEGNGHQQVEYVQGDAE 95 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGG-----------------SS--EEEEEESCH-HHHHHHHHHHHHTTCCSEEEEECCC-
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh-----------------CC--EEEEEeCCH-HHHHHHHHHHHhcCCCceEEEEecHH
Confidence 34579999999999988766421 01 344444321 11111111100000 01223445556
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
...||++++|+++|+.++||+...+ .+|+.-.+-|+|||+++
T Consensus 96 ~l~~~~~~fD~V~~~~~l~~~~d~~--------------------------------------~~l~~~~r~LkpgG~l~ 137 (260)
T 1vl5_A 96 QMPFTDERFHIVTCRIAAHHFPNPA--------------------------------------SFVSEAYRVLKKGGQLL 137 (260)
T ss_dssp CCCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHEEEEEEEE
T ss_pred hCCCCCCCEEEEEEhhhhHhcCCHH--------------------------------------HHHHHHHHHcCCCCEEE
Confidence 6568899999999999999974311 34555567889999999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
+.....++. .........+..+. +. ....+.+.+++.+++++.| |++..++.+.
T Consensus 138 ~~~~~~~~~---------~~~~~~~~~~~~~~----------~~--~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~ 191 (260)
T 1vl5_A 138 LVDNSAPEN---------DAFDVFYNYVEKER----------DY--SHHRAWKKSDWLKMLEEAG-FELEELHCFH 191 (260)
T ss_dssp EEEEEBCSS---------HHHHHHHHHHHHHH----------CT--TCCCCCBHHHHHHHHHHHT-CEEEEEEEEE
T ss_pred EEEcCCCCC---------HHHHHHHHHHHHhc----------Cc--cccCCCCHHHHHHHHHHCC-CeEEEEEEee
Confidence 986554321 11111111111110 11 1224568999999999999 9998888664
No 24
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.88 E-value=1.2e-08 Score=93.05 Aligned_cols=193 Identities=14% Similarity=0.147 Sum_probs=111.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..+..+.+ +..+|+-.|+-. -.-...... .-+..+-+++..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~-------------------~~~~v~gvD~s~-----~~~~~a~~~-~~~~~~~~d~~~ 87 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN-------------------QGLFVYAVEPSI-----VMRQQAVVH-PQVEWFTGYAEN 87 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT-------------------TTCEEEEECSCH-----HHHHSSCCC-TTEEEECCCTTS
T ss_pred CCCCEEEEEcCcccHHHHHHHh-------------------CCCEEEEEeCCH-----HHHHHHHhc-cCCEEEECchhh
Confidence 4467999999999998877642 124566666532 111111111 023345566666
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+|+|+.++||+.. +..+|+.-.+-|+ ||++++
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHFSH--------------------------------------LEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHBC-SSCEEE
T ss_pred CCCCCCCEeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHhC-CcEEEE
Confidence 6688999999999999999632 3346666678999 998888
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC-CCCC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN-PTSW 266 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~-p~~~ 266 (332)
...+....... ... ..+..... . ...++++.+++. .+++.| |++...+.+. |...
T Consensus 129 ~~~~~~~~~~~---~~~---~~~~~~~~----~------------~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~~p~~~ 184 (261)
T 3ege_A 129 LTFDIRLAQRI---WLY---DYFPFLWE----D------------ALRFLPLDEQIN-LLQENT-KRRVEAIPFLLPHDL 184 (261)
T ss_dssp EEECGGGCCCC---GGG---GTCHHHHH----H------------HHTSCCHHHHHH-HHHHHH-CSEEEEEECCEETTC
T ss_pred EEcCCchhHHH---HHH---HHHHHHhh----h------------hhhhCCCHHHHH-HHHHcC-CCceeEEEecCCCcC
Confidence 87654332110 111 11111111 0 113567889999 999999 9988888775 4322
Q ss_pred CC--CCc----cHHHHHHHHHHHHhhHHHhhhCHHHHHHHHHHHHHHHHh
Q 044174 267 LE--GPI----DIKAWTMHVRAAMEAMFSKHFRIEIIDEMFNRLIRRLFE 310 (332)
Q Consensus 267 ~~--~~~----~~~~~a~~iRa~~epll~~hfg~~i~delf~r~~~~v~~ 310 (332)
.+ .+. -+.-.....+...+. +. .+.++.++.+.+++.+.+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~e~~~~~~~~~~~l~~ 232 (261)
T 3ege_A 185 SDLFAAAAWRRPELYLKAEVRAGISS-FA-LANQDLVEKGLELLTADLNN 232 (261)
T ss_dssp SBCCTTTTTTCGGGGGSHHHHHTSHH-HH-HSCHHHHHHHHHHHHHHHHT
T ss_pred cchhhHHhccCchhhcCcchhccccc-ee-ecCHHHHHHHHHHHHHHHhc
Confidence 11 010 111111122222222 22 35677777777777777665
No 25
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.87 E-value=5.1e-08 Score=87.48 Aligned_cols=148 Identities=11% Similarity=0.099 Sum_probs=91.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+++... -+|+..|.-. ..-...+...... .-+..+.+++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~------------------~~v~~vD~s~-~~~~~a~~~~~~~-~~~~~~~~d~~~ 151 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY------------------ATTDLLEPVK-HMLEEAKRELAGM-PVGKFILASMET 151 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC------------------SEEEEEESCH-HHHHHHHHHTTTS-SEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc------------------CEEEEEeCCH-HHHHHHHHHhccC-CceEEEEccHHH
Confidence 4467999999999999987765320 0122222111 1111111111000 112234455555
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+++++.++|+++. .|+..+|+.-.+-|+|||++++
T Consensus 152 ~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 152 ATLPPNTYDLIVIQWTAIYLTD------------------------------------ADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp CCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 5578899999999999999642 2445677777788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
.......... . .....+.+.++.+++++++++.| |++.+++...
T Consensus 196 ~~~~~~~~~~------------------------~------~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~ 239 (254)
T 1xtp_A 196 KENCSTGDRF------------------------L------VDKEDSSLTRSDIHYKRLFNESG-VRVVKEAFQE 239 (254)
T ss_dssp EEEBC--CCE------------------------E------EETTTTEEEBCHHHHHHHHHHHT-CCEEEEEECT
T ss_pred EecCCCcccc------------------------e------ecccCCcccCCHHHHHHHHHHCC-CEEEEeeecC
Confidence 8753221110 0 00123446789999999999999 9998887664
No 26
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.86 E-value=7.1e-08 Score=86.58 Aligned_cols=155 Identities=18% Similarity=0.236 Sum_probs=89.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccccceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQREYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~~~f~~~vpgSFy 106 (332)
....+|+|+|||+|..+..+.+.. + +|+..|.-. +.-...+.. .....--+..+.+.+.
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~-----------------~--~v~~vD~s~-~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV-----------------Q--ECIGVDATK-EMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS-----------------S--EEEEEESCH-HHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC-----------------C--EEEEEECCH-HHHHHHHHHHHHcCCCCeEEEecccc
Confidence 446799999999999887764210 1 333333311 111111111 0000001222344555
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
...+|++++|+++|+.++||+... ..+|+.-++-|+|||+++
T Consensus 80 ~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~LkpgG~l~ 121 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRYAAHHFSDV--------------------------------------RKAVREVARVLKQDGRFL 121 (239)
T ss_dssp BCCSCTTCEEEEEEESCGGGCSCH--------------------------------------HHHHHHHHHHEEEEEEEE
T ss_pred cCCCCCCcEEEEEECCchhhccCH--------------------------------------HHHHHHHHHHcCCCcEEE
Confidence 555788999999999999996431 235566667889999999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
+.....++. ...+.+...+..+ . +. ......+.+++.+++++.| |++..++.+.
T Consensus 122 ~~~~~~~~~---------~~~~~~~~~~~~~-~---------~~--~~~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 175 (239)
T 1xxl_A 122 LVDHYAPED---------PVLDEFVNHLNRL-R---------DP--SHVRESSLSEWQAMFSANQ-LAYQDIQKWN 175 (239)
T ss_dssp EEEECBCSS---------HHHHHHHHHHHHH-H---------CT--TCCCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EEEcCCCCC---------hhHHHHHHHHHHh-c---------cc--cccCCCCHHHHHHHHHHCC-CcEEEEEeec
Confidence 986554321 1111222222111 0 11 1123458999999999999 9988888664
No 27
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.85 E-value=6.3e-08 Score=85.32 Aligned_cols=88 Identities=10% Similarity=0.056 Sum_probs=59.0
Q ss_pred CccccCCcCC-CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044174 103 GSFHHRLFPQ-SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS 181 (332)
Q Consensus 103 gSFy~~lfP~-~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p 181 (332)
|++..-.+++ +++|+|++..++|++.. .|...+|+.-++-|+|
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~------------------------------------~~~~~~l~~~~r~Lkp 132 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPA------------------------------------DMRERYVQHLEALMPQ 132 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCS
T ss_pred CccccCCcccCCCEEEEEECcchhhCCH------------------------------------HHHHHHHHHHHHHcCC
Confidence 3444434444 79999999999999642 1233466677788999
Q ss_pred CCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 182 GGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 182 GG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
||++++.....+.. ...-|.|..+.+|+++.+++ | |++..++..
T Consensus 133 gG~~~l~~~~~~~~----------------------------------~~~~~~~~~~~~el~~~~~~-g-f~i~~~~~~ 176 (203)
T 1pjz_A 133 ACSGLLITLEYDQA----------------------------------LLEGPPFSVPQTWLHRVMSG-N-WEVTKVGGQ 176 (203)
T ss_dssp EEEEEEEEESSCSS----------------------------------SSSSCCCCCCHHHHHHTSCS-S-EEEEEEEES
T ss_pred CcEEEEEEEecCcc----------------------------------ccCCCCCCCCHHHHHHHhcC-C-cEEEEeccc
Confidence 99966555332100 01123455789999999998 8 999988876
Q ss_pred C
Q 044174 262 N 262 (332)
Q Consensus 262 ~ 262 (332)
+
T Consensus 177 ~ 177 (203)
T 1pjz_A 177 D 177 (203)
T ss_dssp S
T ss_pred c
Confidence 5
No 28
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.84 E-value=1.4e-08 Score=94.97 Aligned_cols=101 Identities=11% Similarity=0.205 Sum_probs=65.2
Q ss_pred CCCceeEEEecCccccc-cCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 111 PQSSIHFAHCSYALHWL-SKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 111 P~~svd~~~S~~alHWL-s~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
|++++|+|+|+.++||+ ... .|...+|+.-++-|+|||++++..
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 111 PQMCFDICSCQFVCHYSFESY-----------------------------------EQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp TTCCEEEEEEETCGGGGGGSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCCEEEEEEecchhhccCCH-----------------------------------HHHHHHHHHHHHHhCCCcEEEEec
Confidence 35699999999999997 221 244567777788999999999998
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHH--hh-------ccchhhh------------cccCcCcccCCHHHHHHHHH
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELAN--EQ-------LITEAEL------------DSFNLPIYSASSEEMVKLVD 248 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~--eG-------li~~e~~------------d~fn~P~y~ps~~E~~~~ie 248 (332)
++.. .+...|...-. -| ..+.+.+ .....|.|..+.+++.++++
T Consensus 156 ~~~~---------------~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~ 220 (313)
T 3bgv_A 156 PNSF---------------ELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAK 220 (313)
T ss_dssp ECHH---------------HHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGG
T ss_pred CChH---------------HHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHH
Confidence 7631 11222221100 00 0010010 22356778889999999999
Q ss_pred hCCceEEeEEEEeC
Q 044174 249 KNGHFSIKTVELTN 262 (332)
Q Consensus 249 ~~G~F~I~~le~~~ 262 (332)
+.| |++...+.|.
T Consensus 221 ~~G-~~~v~~~~f~ 233 (313)
T 3bgv_A 221 KYN-MKLVYKKTFL 233 (313)
T ss_dssp GGT-EEEEEEEEHH
T ss_pred HcC-cEEEEecCHH
Confidence 999 9998877664
No 29
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.84 E-value=2.9e-07 Score=85.96 Aligned_cols=116 Identities=15% Similarity=0.141 Sum_probs=68.1
Q ss_pred CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 113 SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 113 ~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
+++|+++|+.++|++.. .|...+|+.-.+-|+|||++++.....
T Consensus 154 ~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGH------------------------------------ENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CCCSEEEEESCGGGTCG------------------------------------GGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCcCEEEEeChHHhcCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 78999999999999642 133456666678899999999998775
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcC-cccCCHHHHHHHHHhCCceEEeEEEEeCCCCCCCCCc
Q 044174 193 PYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLP-IYSASSEEMVKLVDKNGHFSIKTVELTNPTSWLEGPI 271 (332)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P-~y~ps~~E~~~~ie~~G~F~I~~le~~~p~~~~~~~~ 271 (332)
.+...... .+.....-...+.+...+ ...| .+.|+.+++.+++++.| |++..++.+.+ .
T Consensus 198 ~~~~~~~~--~~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~~~-------~ 257 (318)
T 2fk8_A 198 YHPYEMAA--RGKKLSFETARFIKFIVT----------EIFPGGRLPSTEMMVEHGEKAG-FTVPEPLSLRP-------H 257 (318)
T ss_dssp CCHHHHHT--TCHHHHHHHHHHHHHHHH----------HTSTTCCCCCHHHHHHHHHHTT-CBCCCCEECHH-------H
T ss_pred CCchhhhh--ccccccccccchhhHHHH----------hcCCCCcCCCHHHHHHHHHhCC-CEEEEEEecch-------h
Confidence 43110000 000000000111111111 1123 46789999999999999 99877665421 1
Q ss_pred cHHHHHHHHHHHH
Q 044174 272 DIKAWTMHVRAAM 284 (332)
Q Consensus 272 ~~~~~a~~iRa~~ 284 (332)
++..+..|.+.+.
T Consensus 258 y~~~~~~w~~~~~ 270 (318)
T 2fk8_A 258 YIKTLRIWGDTLQ 270 (318)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3345555655443
No 30
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.83 E-value=7.8e-08 Score=90.50 Aligned_cols=179 Identities=14% Similarity=0.176 Sum_probs=96.3
Q ss_pred CCceEEEeecCCCCcchHHHH-------------HHHHHHHHHhhhhcCCCC--CCCceEEEecCCCCCchHHHHhcCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAM-------------QDVLEVIKNKCHSQCPSS--KLPEFQVFFNDKTSNDFNTLFTSLPQ 92 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~-------------~~ii~~i~~~~~~~~~~~--~~~~~~v~~nDlp~NDFn~lf~~l~~ 92 (332)
+...+|+|+|||+|..+..++ ...|+..++++...+... ....+++...|.-++.|..- |
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~---l-- 121 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSS---V-- 121 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHH---H--
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhh---h--
Confidence 346799999999998876554 334555555543321000 00123444455544433220 0
Q ss_pred cccceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHH
Q 044174 93 QREYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFL 172 (332)
Q Consensus 93 ~~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL 172 (332)
...+|++++|+|.|..++||+-..+ +...+|
T Consensus 122 --------------~~~~~~~~FD~V~~~~~lhy~~~~~-----------------------------------~~~~~l 152 (302)
T 2vdw_A 122 --------------REVFYFGKFNIIDWQFAIHYSFHPR-----------------------------------HYATVM 152 (302)
T ss_dssp --------------HTTCCSSCEEEEEEESCGGGTCSTT-----------------------------------THHHHH
T ss_pred --------------hccccCCCeeEEEECchHHHhCCHH-----------------------------------HHHHHH
Confidence 1125778999999999999964422 113578
Q ss_pred HHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHH-HH-HHHHHHHH--Hhhcc--chhhhcccCcCcccCCHHHHHHH
Q 044174 173 NARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYD-LM-ATIFMELA--NEQLI--TEAELDSFNLPIYSASSEEMVKL 246 (332)
Q Consensus 173 ~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~-~l-~~al~~mv--~eGli--~~e~~d~fn~P~y~ps~~E~~~~ 246 (332)
+.-++-|||||+|++..+.+..-........-.++. .. ...|.... .+..+ ...+-.....|.|+-+.+|++++
T Consensus 153 ~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l 232 (302)
T 2vdw_A 153 NNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRV 232 (302)
T ss_dssp HHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHH
T ss_pred HHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccccceeeccccCCCceeeeeEHHHHHHH
Confidence 888899999999999987542211000000000000 00 00000000 00000 00000123467788899999999
Q ss_pred HHhCCceEEeEEEEe
Q 044174 247 VDKNGHFSIKTVELT 261 (332)
Q Consensus 247 ie~~G~F~I~~le~~ 261 (332)
+++.| |++.....+
T Consensus 233 ~~~~G-l~lv~~~~f 246 (302)
T 2vdw_A 233 FNEYG-FVLVDNVDF 246 (302)
T ss_dssp HHHTT-EEEEEEEEH
T ss_pred HHHCC-CEEEEecCh
Confidence 99999 998887765
No 31
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.83 E-value=5.2e-08 Score=86.92 Aligned_cols=140 Identities=15% Similarity=0.130 Sum_probs=90.3
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc-ccceeeecCCccccCC
Q 044174 31 IRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ-REYYSAGVPGSFHHRL 109 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~-~~~f~~~vpgSFy~~l 109 (332)
.+|+|+|||+|..+..+.+ +..+|+..|.-..=-...-+.++.. ..--+..+.+.+.. +
T Consensus 68 ~~vLDiGcG~G~~~~~l~~-------------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~ 127 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS-------------------PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-W 127 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB-------------------TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-C
T ss_pred CCEEEeCCCCCHHHHHHHh-------------------CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-C
Confidence 5999999999999876631 1234555554322111111111111 01123344555555 3
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
.|++++|+++++.++||+.. .|...+|+.-++-|+|||++++..
T Consensus 128 ~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 128 RPTELFDLIFDYVFFCAIEP------------------------------------EMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp CCSSCEEEEEEESSTTTSCG------------------------------------GGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCeeEEEEChhhhcCCH------------------------------------HHHHHHHHHHHHHCCCCcEEEEEE
Confidence 47779999999999999742 123356677778899999999876
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
...... ...|.|..+.+++++++++.| |++..++...
T Consensus 172 ~~~~~~-----------------------------------~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 208 (235)
T 3lcc_A 172 YPITDH-----------------------------------VGGPPYKVDVSTFEEVLVPIG-FKAVSVEENP 208 (235)
T ss_dssp CCCSCC-----------------------------------CSCSSCCCCHHHHHHHHGGGT-EEEEEEEECT
T ss_pred eccccc-----------------------------------CCCCCccCCHHHHHHHHHHcC-CeEEEEEecC
Confidence 543311 112445679999999999999 9999998775
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.82 E-value=8.8e-08 Score=86.16 Aligned_cols=151 Identities=15% Similarity=0.047 Sum_probs=86.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSF 105 (332)
+...+|+|+|||+|..++.+.... ..+|+--|+-. ++....+...... .--+..+.+++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~------------------~~~v~gvD~s~-~~l~~a~~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH------------------GITGTGIDMSS-LFTAQAKRRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT------------------CCEEEEEESCH-HHHHHHHHHHHHTTCTTTEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc------------------CCeEEEEeCCH-HHHHHHHHHHHhcCCCcceEEEECCh
Confidence 345799999999999988775431 01223333211 1112221111000 01123344566
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..-.+ ++++|+|+|..++|++...+ .+|+.-++-|+|||++
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~~~~--------------------------------------~~l~~~~r~LkpgG~l 136 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAGGFA--------------------------------------GAEELLAQSLKPGGIM 136 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTSSSH--------------------------------------HHHHHHTTSEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcCCHH--------------------------------------HHHHHHHHHcCCCeEE
Confidence 55444 78999999999999965422 2455555788999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++..+....... . ..+... .. . .....+++.+++.+++++.| |++..++..
T Consensus 137 ~~~~~~~~~~~~------~---~~~~~~--------~~------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 187 (256)
T 1nkv_A 137 LIGEPYWRQLPA------T---EEIAQA--------CG------V-SSTSDFLTLPGLVGAFDDLG-YDVVEMVLA 187 (256)
T ss_dssp EEEEEEETTCCS------S---HHHHHT--------TT------C-SCGGGSCCHHHHHHHHHTTT-BCCCEEEEC
T ss_pred EEecCcccCCCC------h---HHHHHH--------Hh------c-ccccccCCHHHHHHHHHHCC-CeeEEEEeC
Confidence 998754332211 0 011111 10 0 11225689999999999999 987766543
No 33
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.82 E-value=2.9e-08 Score=90.56 Aligned_cols=164 Identities=13% Similarity=0.158 Sum_probs=92.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+...+|+|+|||+|..+..+.+. .|..+|+-.|.-.+-....-+.+.....--+..+.+....
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~-----------------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 98 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKN-----------------NPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS 98 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHH-----------------CTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHh-----------------CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc
Confidence 45689999999999988776432 1234455555422211111111111000012334455666
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
..+|++++|+|+++.++||+...+ .+|+.-.+-|+|||++++
T Consensus 99 ~~~~~~~fD~v~~~~~l~~~~~~~--------------------------------------~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 99 LPFEDSSFDHIFVCFVLEHLQSPE--------------------------------------EALKSLKKVLKPGGTITV 140 (276)
T ss_dssp CCSCTTCEEEEEEESCGGGCSCHH--------------------------------------HHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeeEEEEechhhhcCCHH--------------------------------------HHHHHHHHHcCCCcEEEE
Confidence 678899999999999999975421 345555678899999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
.....+....... .....+.. ..+..+... . .....+.+++..++++.| |++..++...
T Consensus 141 ~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~----------~--~~~~~~~~~l~~~l~~aG-f~~v~~~~~~ 199 (276)
T 3mgg_A 141 IEGDHGSCYFHPE--GKKAIEAW-NCLIRVQAY----------M--KGNSLVGRQIYPLLQESG-FEKIRVEPRM 199 (276)
T ss_dssp EEECGGGCEEESC--CHHHHHHH-HHHHHHHHH----------T--TCCTTGGGGHHHHHHHTT-CEEEEEEEEE
T ss_pred EEcCCCCceECCC--cHHHHHHH-HHHHHHHHh----------c--CCCcchHHHHHHHHHHCC-CCeEEEeeEE
Confidence 8765433211000 11111111 111111110 0 011235578999999999 9998888654
No 34
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.81 E-value=4.9e-08 Score=89.32 Aligned_cols=86 Identities=13% Similarity=0.022 Sum_probs=62.6
Q ss_pred CCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 112 QSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 112 ~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
.+++|+|+|+.+|||+...+ .|+...|+.-++-|||||+|++....
T Consensus 154 ~~~fD~V~~~~~l~~i~~~~----------------------------------~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCSL----------------------------------DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp CCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred cCCCCEeeehHHHHHhcCCH----------------------------------HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 56999999999999975422 25566788888999999999998643
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 192 IPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 192 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
..+ ... .| ....+.+..+.+|++..++++| |++..++...
T Consensus 200 ~~~-------~~~---------------~g--------~~~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 200 RLP-------SYM---------------VG--------KREFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp SCC-------EEE---------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred cCc-------cce---------------eC--------CeEeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 211 000 11 0113445669999999999999 9999988764
No 35
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.80 E-value=3.5e-07 Score=83.75 Aligned_cols=165 Identities=13% Similarity=0.109 Sum_probs=91.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-~~f~~~vpgSF 105 (332)
+...+|+|+|||+|..+..+...- ..+|+..|.-.. .-...+. +.... ..-+..+.+++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~------------------~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~v~~~~~d~ 123 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG------------------IGEYYGVDIAEV-SINDARVRARNMKRRFKVFFRAQDS 123 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT------------------CSEEEEEESCHH-HHHHHHHHHHTSCCSSEEEEEESCT
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC------------------CCEEEEEECCHH-HHHHHHHHHHhcCCCccEEEEECCc
Confidence 345799999999999987754310 012333332211 1111111 11100 01122234444
Q ss_pred ccCCc-CCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 106 HHRLF-PQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 106 y~~lf-P~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
....+ +++++|+|+++.++||+-.. ..|...+|+.-++-|+|||+
T Consensus 124 ~~~~~~~~~~fD~v~~~~~l~~~~~~----------------------------------~~~~~~~l~~~~~~LkpgG~ 169 (298)
T 1ri5_A 124 YGRHMDLGKEFDVISSQFSFHYAFST----------------------------------SESLDIAQRNIARHLRPGGY 169 (298)
T ss_dssp TTSCCCCSSCEEEEEEESCGGGGGSS----------------------------------HHHHHHHHHHHHHTEEEEEE
T ss_pred cccccCCCCCcCEEEECchhhhhcCC----------------------------------HHHHHHHHHHHHHhcCCCCE
Confidence 44445 68899999999999995211 12455678878889999999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHH-Hhh----------ccch---hhh-----cc-cCcCcccCCHHHHH
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELA-NEQ----------LITE---AEL-----DS-FNLPIYSASSEEMV 244 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv-~eG----------li~~---e~~-----d~-fn~P~y~ps~~E~~ 244 (332)
+++....... +... +.... ... .++. .+. +. -..|.++.+.+|++
T Consensus 170 l~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~ 234 (298)
T 1ri5_A 170 FIMTVPSRDV-----------ILER----YKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMV 234 (298)
T ss_dssp EEEEEECHHH-----------HHHH----HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHH
T ss_pred EEEEECCHHH-----------HHHH----HccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHH
Confidence 9999865321 1111 11000 000 0000 000 00 02345778999999
Q ss_pred HHHHhCCceEEeEEEEe
Q 044174 245 KLVDKNGHFSIKTVELT 261 (332)
Q Consensus 245 ~~ie~~G~F~I~~le~~ 261 (332)
.++++.| |++...+.+
T Consensus 235 ~ll~~aG-f~~v~~~~~ 250 (298)
T 1ri5_A 235 DGFKRLG-LSLVERKGF 250 (298)
T ss_dssp HHHHTTT-EEEEEEEEH
T ss_pred HHHHHcC-CEEEEecCH
Confidence 9999999 999888765
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.78 E-value=7e-08 Score=84.04 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=86.9
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCccccC
Q 044174 31 IRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSFHHR 108 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSFy~~ 108 (332)
-+|+|+|||+|..+..+... +..+|+.-|.-.. .....+.. .... ..-+..+-+++...
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~------------------~~~~v~~~D~s~~-~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 105 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ------------------SDFSIRALDFSKH-MNEIALKNIADANLNDRIQIVQGDVHNI 105 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH------------------SEEEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEECBTTBC
T ss_pred CEEEEECCCCCHHHHHHHHc------------------CCCeEEEEECCHH-HHHHHHHHHHhccccCceEEEEcCHHHC
Confidence 39999999999988776542 1234444443211 11111111 1000 01123344555555
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+|++++|+++++.++||+.. ...+|+.-.+-|+|||++++.
T Consensus 106 ~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 106 PIEDNYADLIVSRGSVFFWED--------------------------------------VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp SSCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccccEEEECchHhhccC--------------------------------------HHHHHHHHHHhCCCCCEEEEE
Confidence 688999999999999999722 123566666788999999997
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
..-.. ....+.+...+.... .+.. ..+.......+.+++++++++.| |++.++..
T Consensus 148 ~~~~~----------~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~ 202 (219)
T 3dlc_A 148 GGFGN----------KELRDSISAEMIRKN-PDWK-----EFNRKNISQENVERFQNVLDEIG-ISSYEIIL 202 (219)
T ss_dssp ECCSS----------HHHHHHHHHHHHHHC-TTHH-----HHHHHHSSHHHHHHHHHHHHHHT-CSSEEEEE
T ss_pred eccCc----------HHHHHHHHHHHHHhH-HHHH-----hhhhhccccCCHHHHHHHHHHcC-CCeEEEEe
Confidence 53211 112233333332220 0000 00101122338899999999999 87766553
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.78 E-value=3.6e-07 Score=85.43 Aligned_cols=152 Identities=11% Similarity=0.053 Sum_probs=90.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSF 105 (332)
....+|+|+|||+|..++.+.+.. . .+|+--|+-. +.-...+...... .--+..+-+++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~-----------------~~v~gvD~s~-~~~~~a~~~~~~~~~~~~v~~~~~d~ 176 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-G-----------------SRVEGVTLSA-AQADFGNRRARELRIDDHVRSRVCNM 176 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-C-----------------CEEEEEESCH-HHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-C-----------------CEEEEEeCCH-HHHHHHHHHHHHcCCCCceEEEECCh
Confidence 456799999999999998876531 0 1122222211 1111111100000 00122344455
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..-.+|++++|+|+|+.++||+. +. .+|+.-.+-|+|||++
T Consensus 177 ~~~~~~~~~fD~V~~~~~l~~~~--~~-------------------------------------~~l~~~~~~LkpgG~l 217 (312)
T 3vc1_A 177 LDTPFDKGAVTASWNNESTMYVD--LH-------------------------------------DLFSEHSRFLKVGGRY 217 (312)
T ss_dssp TSCCCCTTCEEEEEEESCGGGSC--HH-------------------------------------HHHHHHHHHEEEEEEE
T ss_pred hcCCCCCCCEeEEEECCchhhCC--HH-------------------------------------HHHHHHHHHcCCCcEE
Confidence 55557889999999999999973 21 3556666789999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++......+.... ....+.. + .... .| .+++.+++++++++.| |++..++.+
T Consensus 218 ~~~~~~~~~~~~~----~~~~~~~-------~-~~~~----------~~-~~~s~~~~~~~l~~aG-f~~~~~~~~ 269 (312)
T 3vc1_A 218 VTITGCWNPRYGQ----PSKWVSQ-------I-NAHF----------EC-NIHSRREYLRAMADNR-LVPHTIVDL 269 (312)
T ss_dssp EEEEEEECTTTCS----CCHHHHH-------H-HHHH----------TC-CCCBHHHHHHHHHTTT-EEEEEEEEC
T ss_pred EEEEccccccccc----hhHHHHH-------H-Hhhh----------cC-CCCCHHHHHHHHHHCC-CEEEEEEeC
Confidence 9987765542211 1111111 1 1111 12 4788999999999999 999888866
No 38
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.76 E-value=1e-07 Score=90.83 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=97.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc--ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ--REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~~vpgSF 105 (332)
++..+|+|+|||+|..+..+++. .|..+++.-|+|.. +-+..... ..-.+.-+.|+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~~~----~~~~~~~~~~~~~~v~~~~~d~ 241 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLRE-----------------HPGLQGVLLDRAEV----VARHRLDAPDVAGRWKVVEGDF 241 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHH-----------------CTTEEEEEEECHHH----HTTCCCCCGGGTTSEEEEECCT
T ss_pred cCCceEEEECCccCHHHHHHHHH-----------------CCCCEEEEecCHHH----hhcccccccCCCCCeEEEecCC
Confidence 45689999999999988776442 24577888888531 11211111 122356678899
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
+ ..+| ++|+++++.++|..+. .+...+|+.-++-|+|||++
T Consensus 242 ~-~~~p--~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~LkpgG~l 282 (348)
T 3lst_A 242 L-REVP--HADVHVLKRILHNWGD------------------------------------EDSVRILTNCRRVMPAHGRV 282 (348)
T ss_dssp T-TCCC--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTCCTTCEE
T ss_pred C-CCCC--CCcEEEEehhccCCCH------------------------------------HHHHHHHHHHHHhcCCCCEE
Confidence 8 5677 9999999999996432 13345777788899999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
++.-.-.++.... ... .+.++..-.. ..-..+|.+|+++++++.| |++.++..
T Consensus 283 ~i~e~~~~~~~~~---~~~--------~~~d~~~~~~----------~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 283 LVIDAVVPEGNDA---HQS--------KEMDFMMLAA----------RTGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp EEEECCBCSSSSC---CHH--------HHHHHHHHHT----------TSCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred EEEEeccCCCCCc---chh--------hhcChhhhhc----------CCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 9876544332110 111 1111111000 1224578999999999999 99888765
No 39
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.76 E-value=1.1e-08 Score=89.44 Aligned_cols=156 Identities=12% Similarity=0.027 Sum_probs=89.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~l 109 (332)
..+|+|+|||+|..+..+... + .+|+.-|.-. +.-...+.. ...+ +..+.+++..-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~------------~-------~~v~~~D~s~-~~~~~a~~~-~~~~--~~~~~~d~~~~- 102 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL------------A-------DRVTALDGSA-EMIAEAGRH-GLDN--VEFRQQDLFDW- 102 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH------------S-------SEEEEEESCH-HHHHHHGGG-CCTT--EEEEECCTTSC-
T ss_pred CCeEEEECCCCCHHHHHHHhc------------C-------CeEEEEeCCH-HHHHHHHhc-CCCC--eEEEecccccC-
Confidence 459999999999988877543 0 1233333211 111112220 0011 23344555544
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+++++.++||+.. .++..+|+.-.+-|+|||++++..
T Consensus 103 ~~~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 103 TPDRQWDAVFFAHWLAHVPD------------------------------------DRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp CCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCceeEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 89999999999999999643 123456777778899999999998
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHhh---ccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELANEQ---LITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eG---li~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.++.... +...+....... .+. .-..+.....+++.+|+++++++.| |+|+..+..
T Consensus 147 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~ 205 (218)
T 3ou2_A 147 VTDHERR-------------LEQQDDSEPEVAVRRTLQ--DGRSFRIVKVFRSPAELTERLTALG-WSCSVDEVH 205 (218)
T ss_dssp ECCCC-------------------------CEEEEECT--TSCEEEEECCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCCCccc-------------cchhhhcccccceeeecC--CcchhhHhhcCCCHHHHHHHHHHCC-CEEEeeecc
Confidence 8763211 111111100000 010 0001111233689999999999999 998877754
No 40
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.75 E-value=1.5e-07 Score=83.75 Aligned_cols=148 Identities=15% Similarity=0.118 Sum_probs=92.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+. + .+|+..|.-. +.-...+..... .-+..+-+.+...
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~------------~-------~~v~~vD~s~-~~~~~a~~~~~~--~~~~~~~~d~~~~ 110 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT------------G-------YKAVGVDISE-VMIQKGKERGEG--PDLSFIKGDLSSL 110 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------T-------CEEEEEESCH-HHHHHHHTTTCB--TTEEEEECBTTBC
T ss_pred CCCeEEEEcCCCCHHHHHHHHc------------C-------CeEEEEECCH-HHHHHHHhhccc--CCceEEEcchhcC
Confidence 4579999999999988776542 0 1344444321 222222222111 1123344555566
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+|++++|+++++.++||+... ..+|+.-++-|+|||++++.
T Consensus 111 ~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 111 PFENEQFEAIMAINSLEWTEEP--------------------------------------LRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp SSCTTCEEEEEEESCTTSSSCH--------------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCccEEEEcChHhhccCH--------------------------------------HHHHHHHHHHhCCCeEEEEE
Confidence 6889999999999999996321 13566666788999999999
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
..+...... . ..+. ............+.++++.++++.| |++...+.+
T Consensus 153 ~~~~~~~~~------~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 153 ILGPTAKPR------E-------NSYP-----------RLYGKDVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp EECTTCGGG------G-------GGGG-----------GGGTCCCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EcCCcchhh------h-------hhhh-----------hhccccccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 876543110 0 0000 1111223556678999999999999 999888844
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.74 E-value=1.2e-07 Score=83.01 Aligned_cols=142 Identities=13% Similarity=0.113 Sum_probs=91.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+...+|+|+|||+|..+..+.+. + .+|+.-|.-. +.....+... -+..+-+++..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~------------~-------~~v~~vD~s~-~~~~~a~~~~-----~~~~~~~d~~~ 96 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAA------------G-------FDVDATDGSP-ELAAEASRRL-----GRPVRTMLFHQ 96 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHT------------T-------CEEEEEESCH-HHHHHHHHHH-----TSCCEECCGGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHc------------C-------CeEEEECCCH-HHHHHHHHhc-----CCceEEeeecc
Confidence 34579999999999998777542 0 2344444321 1111111111 11123345554
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.. +++++|+++++.++|++.. .|+..+|+.-++-|+|||++++
T Consensus 97 ~~-~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 97 LD-AIDAYDAVWAHACLLHVPR------------------------------------DELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp CC-CCSCEEEEEECSCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC-CCCcEEEEEecCchhhcCH------------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 44 8899999999999999642 2445677777788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
.+....... .+.+...+.+.+.+++++++++.|.|++..++...
T Consensus 140 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 140 SYKSGEGEG-------------------------------RDKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp EEECCSSCE-------------------------------ECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred EEcCCCccc-------------------------------ccccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 975433211 01222345678999999999999977887777543
No 42
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.74 E-value=4.2e-07 Score=87.50 Aligned_cols=154 Identities=13% Similarity=0.118 Sum_probs=96.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+++. .|..++..-|+|. ......... -+.-+.|+|++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~~-----~~~~a~~~~--~v~~~~~d~~~ 257 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAK-----------------YPSINAINFDLPH-----VIQDAPAFS--GVEHLGGDMFD 257 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECHH-----HHTTCCCCT--TEEEEECCTTT
T ss_pred cCCCEEEEeCCCcCHHHHHHHHh-----------------CCCCEEEEEehHH-----HHHhhhhcC--CCEEEecCCCC
Confidence 44689999999999988776442 2456778888742 222221111 24567899987
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+|++ |+++++++||+++. .+...+|+.=++-|+|||++++
T Consensus 258 -~~p~~--D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 258 -GVPKG--DAIFIKWICHDWSD------------------------------------EHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp -CCCCC--SEEEEESCGGGBCH------------------------------------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCCCC--CEEEEechhhcCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEE
Confidence 68876 99999999995432 1334577777789999999998
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.-.-.++.... ... .-...+.++..-.. ...-..++.+|+++++++.| |++.++...
T Consensus 299 ~e~~~~~~~~~-----~~~--~~~~~~~d~~~~~~---------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 355 (368)
T 3reo_A 299 AEYILPPSPDP-----SIA--TKVVIHTDALMLAY---------NPGGKERTEKEFQALAMASG-FRGFKVASC 355 (368)
T ss_dssp EECCCCSSCCC-----CHH--HHHHHHHHHHHHHH---------SSBCCCCCHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEeccCCCCCC-----chh--hhHHHhhhHHHHhh---------cCCCccCCHHHHHHHHHHCC-CeeeEEEEe
Confidence 75544332110 000 00111222211110 01224578999999999999 998777644
No 43
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.74 E-value=9.2e-08 Score=84.00 Aligned_cols=146 Identities=14% Similarity=0.050 Sum_probs=92.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy 106 (332)
....+|+|+|||+|..+..+.... .|..+|+.-|.-.. .....+. +....---+..+.+++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~----------------~~~~~v~~vD~s~~-~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMV----------------GEKGKVYAIDVQEE-MVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHH----------------TTTCEEEEEESCHH-HHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred CCCCEEEEEecCCCHHHHHHHHHh----------------CCCcEEEEEECCHH-HHHHHHHHHHHcCCCcEEEEecccc
Confidence 345799999999999998775431 12345555554221 1111111 11100001333445556
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
...+|++++|+++++.++||+.. ...+|+.-.+-|+|||+++
T Consensus 99 ~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~ 140 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFTFHELSE--------------------------------------PLKFLEELKRVAKPFAYLA 140 (219)
T ss_dssp BCSSCSSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHHEEEEEEEE
T ss_pred cCCCCCCCeeEEEeehhhhhcCC--------------------------------------HHHHHHHHHHHhCCCeEEE
Confidence 66688999999999999999743 1235566667889999999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
+........... .....+.+.++++..+++.| |++.+.+.+.
T Consensus 141 i~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 182 (219)
T 3dh0_A 141 IIDWKKEERDKG---------------------------------PPPEEVYSEWEVGLILEDAG-IRVGRVVEVG 182 (219)
T ss_dssp EEEECSSCCSSS---------------------------------CCGGGSCCHHHHHHHHHHTT-CEEEEEEEET
T ss_pred EEEecccccccC---------------------------------CchhcccCHHHHHHHHHHCC-CEEEEEEeeC
Confidence 987654432100 01123458999999999999 9988877664
No 44
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.72 E-value=5.8e-07 Score=86.46 Aligned_cols=154 Identities=16% Similarity=0.160 Sum_probs=97.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..+..+++. .|..++..-|+|. ........ --+.-+.|+|+.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~~-----~~~~a~~~--~~v~~~~~D~~~ 255 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAH-----------------YPTIKGVNFDLPH-----VISEAPQF--PGVTHVGGDMFK 255 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECHH-----HHTTCCCC--TTEEEEECCTTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHHH-----------------CCCCeEEEecCHH-----HHHhhhhc--CCeEEEeCCcCC
Confidence 44689999999999988776442 2456778888852 22222211 235668899998
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+|.+ |+++++++||..+. .+...+|+.-++-|+|||++++
T Consensus 256 -~~p~~--D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 256 -EVPSG--DTILMKWILHDWSD------------------------------------QHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp -CCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCCCC--CEEEehHHhccCCH------------------------------------HHHHHHHHHHHHHcCCCCEEEE
Confidence 78876 99999999985322 2344577777889999999998
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.-.-.++... ...... ...+.++.--.. ...-..+|.+|+++++++.| |++.++...
T Consensus 297 ~e~~~~~~~~-----~~~~~~--~~~~~d~~m~~~---------~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 297 VQCILPVNPE-----ANPSSQ--GVFHVDMIMLAH---------NPGGRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp EECCBCSSCC-----SSHHHH--HHHHHHHHHHHH---------CSSCCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEeccCCCCC-----cchhhh--hHHHhHHHHHhc---------ccCCccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 7554433211 011111 111222211000 11223468999999999999 998877644
No 45
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.71 E-value=1.2e-07 Score=87.40 Aligned_cols=88 Identities=13% Similarity=0.110 Sum_probs=63.8
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+|+|+.+|||+.... .|+..+|+.-++-|||||+|++..
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPDL----------------------------------ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCCCCCCEEEehhhhhhhcCCH----------------------------------HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6778899999999999976421 245567788888999999999974
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
.-..+ ... .| .-..+.++.+.+|+++++++.| |++..++.+.
T Consensus 216 ~~~~~-------~~~---------------~~--------~~~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 257 (289)
T 2g72_A 216 ALEES-------WYL---------------AG--------EARLTVVPVSEEEVREALVRSG-YKVRDLRTYI 257 (289)
T ss_dssp EESCC-------EEE---------------ET--------TEEEECCCCCHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred ecCcc-------eEE---------------cC--------CeeeeeccCCHHHHHHHHHHcC-CeEEEeeEee
Confidence 22110 000 00 1123567789999999999999 9999988665
No 46
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.71 E-value=5.1e-08 Score=89.80 Aligned_cols=103 Identities=15% Similarity=0.209 Sum_probs=65.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+..-+|+|+|||+|..|..+.+. + -+|+-.|.-. . ..+...+..+ +..+-+++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~------------~-------~~v~gvD~s~---~-ml~~a~~~~~--v~~~~~~~e~ 92 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEF------------F-------ERVHAVDPGE---A-QIRQALRHPR--VTYAVAPAED 92 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTT------------C-------SEEEEEESCH---H-HHHTCCCCTT--EEEEECCTTC
T ss_pred CCCCCEEEEcCCCCHHHHHHHHh------------C-------CEEEEEeCcH---H-hhhhhhhcCC--ceeehhhhhh
Confidence 33468999999999998776431 0 1233334311 1 1111111111 2334566677
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++|+|+|+|+.++||+. | ..+|+.-++-|||||+|++
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~~--~-------------------------------------~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWFD--L-------------------------------------DRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTCC--H-------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred hcccCCcccEEEEeeehhHhh--H-------------------------------------HHHHHHHHHHcCCCCEEEE
Confidence 779999999999999999963 1 1244555567899999999
Q ss_pred EecccCC
Q 044174 188 IMPGIPY 194 (332)
Q Consensus 188 ~~~gr~~ 194 (332)
...+...
T Consensus 134 ~~~~~~~ 140 (257)
T 4hg2_A 134 VTYGLTR 140 (257)
T ss_dssp EEECCCB
T ss_pred EECCCCC
Confidence 8877654
No 47
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.70 E-value=2.2e-07 Score=81.43 Aligned_cols=153 Identities=15% Similarity=0.154 Sum_probs=89.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.+. + .+++..|.-..- -...+... ...+.+++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~------------------~-~~~~~~D~~~~~-~~~~~~~~------~~~~~~d~~~ 84 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN------------------G-TRVSGIEAFPEA-AEQAKEKL------DHVVLGDIET 84 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT------------------T-CEEEEEESSHHH-HHHHHTTS------SEEEESCTTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc------------------C-CeEEEEeCCHHH-HHHHHHhC------CcEEEcchhh
Confidence 34579999999999988766431 1 234444432211 11111110 1123334433
Q ss_pred --CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 108 --RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 108 --~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
..+|++++|+++++.++|++... ..+|+.-.+-|+|||++
T Consensus 85 ~~~~~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~L~~gG~l 126 (230)
T 3cc8_A 85 MDMPYEEEQFDCVIFGDVLEHLFDP--------------------------------------WAVIEKVKPYIKQNGVI 126 (230)
T ss_dssp CCCCSCTTCEEEEEEESCGGGSSCH--------------------------------------HHHHHHTGGGEEEEEEE
T ss_pred cCCCCCCCccCEEEECChhhhcCCH--------------------------------------HHHHHHHHHHcCCCCEE
Confidence 45778999999999999997531 13556666889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhc-ccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELD-SFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d-~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
++....... +..+.. +....... .... .-.....+.+.+|+++++++.| |++..++.+.
T Consensus 127 ~~~~~~~~~------------~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 186 (230)
T 3cc8_A 127 LASIPNVSH------------ISVLAP----LLAGNWTY-TEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVY 186 (230)
T ss_dssp EEEEECTTS------------HHHHHH----HHTTCCCC-BSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EEEeCCcch------------HHHHHH----HhcCCcee-ccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEecc
Confidence 998865432 111111 11111110 0000 0012235679999999999999 9999988775
No 48
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.70 E-value=1.3e-07 Score=83.91 Aligned_cols=152 Identities=10% Similarity=0.065 Sum_probs=87.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccccC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy~~ 108 (332)
..+|+|+|||+|..+..+.+. + + +|+-.|+-.. .-...+. .+. -+..+-+++..-
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~------------~-----~--~v~gvD~s~~-~~~~a~~~~~~----~v~~~~~d~~~~ 98 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH------------F-----N--DITCVEASEE-AISHAQGRLKD----GITYIHSRFEDA 98 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT------------C-----S--CEEEEESCHH-HHHHHHHHSCS----CEEEEESCGGGC
T ss_pred CCcEEEECCCCCHHHHHHHHh------------C-----C--cEEEEeCCHH-HHHHHHHhhhC----CeEEEEccHHHc
Confidence 458999999999988765321 1 1 2344443211 1111111 111 122334444443
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHH-HhhccCCeEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARA-EEIVSGGMMVI 187 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra-~EL~pGG~mvl 187 (332)
+|++++|+|+|+.++|++... ..+|+.-+ +-|+|||++++
T Consensus 99 -~~~~~fD~v~~~~~l~~~~~~--------------------------------------~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 99 -QLPRRYDNIVLTHVLEHIDDP--------------------------------------VALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -CCSSCEEEEEEESCGGGCSSH--------------------------------------HHHHHHHHHTTEEEEEEEEE
T ss_pred -CcCCcccEEEEhhHHHhhcCH--------------------------------------HHHHHHHHHHhcCCCCEEEE
Confidence 688999999999999997431 23566666 78899999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhh----hcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAE----LDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~----~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
..+.... ...... .+ .|...... .+....-..+.+.+++++++++.| |++.+.+.+.
T Consensus 140 ~~~~~~~-----------~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 200 (250)
T 2p7i_A 140 VCPNANA-----------VSRQIA-VK-----MGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAG-LQVTYRSGIF 200 (250)
T ss_dssp EEECTTC-----------HHHHHH-HH-----TTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTT-CEEEEEEEEE
T ss_pred EcCChHH-----------HHHHHH-HH-----cCccccchhcccccccccccccCCHHHHHHHHHHCC-CeEEEEeeeE
Confidence 9865432 111111 11 12221110 000111123568999999999999 9999888543
No 49
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.69 E-value=9.4e-08 Score=85.67 Aligned_cols=147 Identities=14% Similarity=0.107 Sum_probs=90.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHh-cCcccccceeeecCCcccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFT-SLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~-~l~~~~~~f~~~vpgSFy~ 107 (332)
...+|+|+|||+|..+..+++.. ..+|+..|.-..- -...+ .+......-+..+-+++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~------------------~~~v~~vD~s~~~-~~~a~~~~~~~~~~~~~~~~~d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL------------------FREVDMVDITEDF-LVQAKTYLGEEGKRVRNYFCCGLQD 139 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT------------------CSEEEEEESCHHH-HHHHHHHTGGGGGGEEEEEECCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc------------------CCEEEEEeCCHHH-HHHHHHHhhhcCCceEEEEEcChhh
Confidence 46799999999999887764311 1133333332111 11111 1111101112233445555
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.++++++|+++++.++|++.. .++..+|+.-.+-|+|||++++
T Consensus 140 ~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 140 FTPEPDSYDVIWIQWVIGHLTD------------------------------------QHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp CCCCSSCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCCCCEEEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEE
Confidence 5677889999999999998643 1234566767788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
......+.. .. +. ....+.++.+++++++++.| |++...+...
T Consensus 184 ~~~~~~~~~-------------------------~~-----~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~ 226 (241)
T 2ex4_A 184 KDNMAQEGV-------------------------IL-----DD-VDSSVCRDLDVVRRIICSAG-LSLLAEERQE 226 (241)
T ss_dssp EEEEBSSSE-------------------------EE-----ET-TTTEEEEBHHHHHHHHHHTT-CCEEEEEECC
T ss_pred EEccCCCcc-------------------------ee-----cc-cCCcccCCHHHHHHHHHHcC-CeEEEeeecC
Confidence 765433200 00 00 12345669999999999999 9998888664
No 50
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.68 E-value=7.5e-07 Score=82.53 Aligned_cols=152 Identities=15% Similarity=0.181 Sum_probs=81.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc---ccceeeecCCc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ---REYYSAGVPGS 104 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~---~~~f~~~vpgS 104 (332)
....+|+|+|||+|..+..+++.. .+..+|+..|+-. .+-...+..... ...-+.-+.++
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~----------------~~~~~v~gvD~s~-~~~~~a~~~~~~~~~~~~~v~~~~~d 97 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQEL----------------KPFEQIIGSDLSA-TMIKTAEVIKEGSPDTYKNVSFKISS 97 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHS----------------SCCSEEEEEESCH-HHHHHHHHHHHHCC-CCTTEEEEECC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC----------------CCCCEEEEEeCCH-HHHHHHHHHHHhccCCCCceEEEEcC
Confidence 346899999999999998886421 0112333333311 111111111000 00011112233
Q ss_pred cccCCcCC------CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044174 105 FHHRLFPQ------SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEE 178 (332)
Q Consensus 105 Fy~~lfP~------~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~E 178 (332)
+.+-.++. +++|+|+|+.++||+ . | ..+|+.-.+-
T Consensus 98 ~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-~-------------------------------------~~~l~~~~~~ 138 (299)
T 3g5t_A 98 SDDFKFLGADSVDKQKIDMITAVECAHWF-D-F-------------------------------------EKFQRSAYAN 138 (299)
T ss_dssp TTCCGGGCTTTTTSSCEEEEEEESCGGGS-C-H-------------------------------------HHHHHHHHHH
T ss_pred HHhCCccccccccCCCeeEEeHhhHHHHh-C-H-------------------------------------HHHHHHHHHh
Confidence 33333444 899999999999997 2 2 1355566678
Q ss_pred hccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCccc-CCHHHHHHHHHhCCce
Q 044174 179 IVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYS-ASSEEMVKLVDKNGHF 253 (332)
Q Consensus 179 L~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~-ps~~E~~~~ie~~G~F 253 (332)
|+|||++++...+.+..... . .+...+.++... +....|++. |..+.++..+++.| |
T Consensus 139 LkpgG~l~i~~~~~~~~~~~-----~----~~~~~~~~~~~~--------~~~~~~~w~~p~~~~~~~~l~~~g-f 196 (299)
T 3g5t_A 139 LRKDGTIAIWGYADPIFPDY-----P----EFDDLMIEVPYG--------KQGLGPYWEQPGRSRLRNMLKDSH-L 196 (299)
T ss_dssp EEEEEEEEEEEEEEEECTTC-----G----GGTTHHHHHHHC--------TTTTGGGSCTTHHHHHHTTTTTCC-C
T ss_pred cCCCcEEEEEecCCccccCc-----H----HHHHHHHHhccC--------cccccchhhchhhHHHHHhhhccC-C
Confidence 99999999865553321110 0 112233322111 002235444 88999999999999 6
No 51
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.68 E-value=1.9e-07 Score=84.00 Aligned_cols=172 Identities=17% Similarity=0.173 Sum_probs=94.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.+. + +. +|+.-|+-. +.-...+..... .-+..+.+++..
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~------------~-----~~-~v~~vD~s~-~~~~~a~~~~~~--~~~~~~~~d~~~ 101 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEH------------G-----AK-KVLGIDLSE-RMLTEAKRKTTS--PVVCYEQKAIED 101 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT------------T-----CS-EEEEEESCH-HHHHHHHHHCCC--TTEEEEECCGGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHc------------C-----CC-EEEEEECCH-HHHHHHHHhhcc--CCeEEEEcchhh
Confidence 35689999999999888776432 1 11 455555422 122222221111 112334556666
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+|+|+.++||+.. ...+|+.-++-|+|||++++
T Consensus 102 ~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 102 IAIEPDAYNVVLSSLALHYIAS--------------------------------------FDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp CCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCeEEEEEchhhhhhhh--------------------------------------HHHHHHHHHHHcCCCcEEEE
Confidence 6688999999999999999732 22456666788999999999
Q ss_pred EecccCCCCCCCCc----chhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCC
Q 044174 188 IMPGIPYGMPYSHL----TNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNP 263 (332)
Q Consensus 188 ~~~gr~~~~~~~~~----~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p 263 (332)
.............. ..+. .+...+.....++..... ...-....|.+|.+|++++++++| |++..++...|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~e~~~ 218 (253)
T 3g5l_A 144 SVEHPVFTADGRQDWYTDETGN---KLHWPVDRYFNESMRTSH-FLGEDVQKYHRTVTTYIQTLLKNG-FQINSVIEPEP 218 (253)
T ss_dssp EEECHHHHSSSSCSCEECSSCC---EEEEEECCTTCCCEEEEE-ETTEEEEEECCCHHHHHHHHHHTT-EEEEEEECCCC
T ss_pred EeCCCccccCccccceeccCCc---eEEEEeccccccceEEEe-eccccCccEecCHHHHHHHHHHcC-CeeeeeecCCC
Confidence 86532100000000 0000 000000000011110000 001134567789999999999999 99988886554
No 52
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.68 E-value=2.7e-07 Score=85.94 Aligned_cols=167 Identities=9% Similarity=-0.021 Sum_probs=95.1
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc-cceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR-EYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~-~~f~~~vpgSFy 106 (332)
+...+|+|+|||+|..++.++.. ..|..+|+--|.-..--...-+...... .--+..+.+++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~----------------~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 180 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYS----------------ACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAW 180 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCT----------------TCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHh----------------cCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchh
Confidence 44679999999999988765210 1234555555552211111111111110 111334556677
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
.-.+| +++|+++|+.++|++... .....+|+.-.+-|+|||+++
T Consensus 181 ~~~~~-~~fD~v~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~LkpgG~l~ 224 (305)
T 3ocj_A 181 KLDTR-EGYDLLTSNGLNIYEPDD-----------------------------------ARVTELYRRFWQALKPGGALV 224 (305)
T ss_dssp GCCCC-SCEEEEECCSSGGGCCCH-----------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred cCCcc-CCeEEEEECChhhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEE
Confidence 76677 999999999999985431 112246666678899999999
Q ss_pred EEecccCCCCCCCCcc-----hhHHHHHHHHHHHHHHHhhccchhhhcccCcCc-ccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 187 IIMPGIPYGMPYSHLT-----NGVMYDLMATIFMELANEQLITEAELDSFNLPI-YSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~-----~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~-y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
+...+++......... ...........+.+ + ....+ .+++.+|+++++++.| |++.+++.
T Consensus 225 i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~---------~~~~~~~~~~~~~~~~~l~~aG-F~~v~~~~ 290 (305)
T 3ocj_A 225 TSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTR----L---------IQPRWNALRTHAQTRAQLEEAG-FTDLRFED 290 (305)
T ss_dssp EECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHH----T---------TCCSCCCCCCHHHHHHHHHHTT-CEEEEEEC
T ss_pred EEecCCCCcccccccceeeccccchhhhhhhHHHH----H---------HhhhhhccCCHHHHHHHHHHCC-CEEEEEEc
Confidence 9987765432211100 00000111111111 1 11112 4579999999999999 99988775
No 53
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.67 E-value=1.4e-07 Score=83.43 Aligned_cols=97 Identities=19% Similarity=0.230 Sum_probs=64.0
Q ss_pred ccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044174 104 SFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGG 183 (332)
Q Consensus 104 SFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG 183 (332)
++....+|++++|+++++.++||+.. ...+|+.-.+-|+|||
T Consensus 92 d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG 133 (219)
T 1vlm_A 92 TAENLPLKDESFDFALMVTTICFVDD--------------------------------------PERALKEAYRILKKGG 133 (219)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGSSC--------------------------------------HHHHHHHHHHHEEEEE
T ss_pred ccccCCCCCCCeeEEEEcchHhhccC--------------------------------------HHHHHHHHHHHcCCCc
Confidence 33444467889999999999999632 1135555567789999
Q ss_pred eEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 184 MMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 184 ~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++++......+ .....+..+ ..+ ..+.....+.+.+++++++++.| |++..+...
T Consensus 134 ~l~i~~~~~~~--------------~~~~~~~~~-~~~-------~~~~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 134 YLIVGIVDRES--------------FLGREYEKN-KEK-------SVFYKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp EEEEEEECSSS--------------HHHHHHHHT-TTC--------CCSTTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred EEEEEEeCCcc--------------HHHHHHHHH-hcC-------cchhcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 99999865432 111111111 111 12333456679999999999999 999887754
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.67 E-value=5e-07 Score=82.77 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=60.0
Q ss_pred CccccCCcCC-CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044174 103 GSFHHRLFPQ-SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS 181 (332)
Q Consensus 103 gSFy~~lfP~-~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p 181 (332)
|++.+-.+++ +++|+|++..+||+|.. . +...+++.-++-|+|
T Consensus 140 ~D~~~l~~~~~~~FD~V~~~~~l~~l~~---~---------------------------------~~~~~l~~~~~~Lkp 183 (252)
T 2gb4_A 140 CSIFDLPRANIGKFDRIWDRGALVAINP---G---------------------------------DHDRYADIILSLLRK 183 (252)
T ss_dssp SCTTTGGGGCCCCEEEEEESSSTTTSCG---G---------------------------------GHHHHHHHHHHTEEE
T ss_pred CccccCCcccCCCEEEEEEhhhhhhCCH---H---------------------------------HHHHHHHHHHHHcCC
Confidence 4444444443 79999999999999741 1 123466667788999
Q ss_pred CCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 182 GGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 182 GG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
||++++.....+. + ...-|.|..+.+|++++++. + |+|..++.+
T Consensus 184 GG~l~l~~~~~~~--------------------------~--------~~~g~~~~~~~~el~~~l~~-~-f~v~~~~~~ 227 (252)
T 2gb4_A 184 EFQYLVAVLSYDP--------------------------T--------KHAGPPFYVPSAELKRLFGT-K-CSMQCLEEV 227 (252)
T ss_dssp EEEEEEEEEECCT--------------------------T--------SCCCSSCCCCHHHHHHHHTT-T-EEEEEEEEE
T ss_pred CeEEEEEEEecCC--------------------------c--------cCCCCCCCCCHHHHHHHhhC-C-eEEEEEecc
Confidence 9999755333110 0 01124456789999999986 6 999999977
Q ss_pred CC
Q 044174 262 NP 263 (332)
Q Consensus 262 ~p 263 (332)
++
T Consensus 228 ~~ 229 (252)
T 2gb4_A 228 DA 229 (252)
T ss_dssp EC
T ss_pred cc
Confidence 63
No 55
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.67 E-value=4.2e-07 Score=87.08 Aligned_cols=153 Identities=15% Similarity=0.126 Sum_probs=96.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccccceeeecCCcccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQREYYSAGVPGSFHH 107 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~~~f~~~vpgSFy~ 107 (332)
..-+|+|+|||+|..++.+++ + .|.+.+..-|+|. -....+.. +....-.+..++|+|+.
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~--------~---------~p~~~~~~~dlp~--v~~~a~~~~~~~~~~rv~~~~gD~~~ 239 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMS--------L---------YPGCKITVFDIPE--VVWTAKQHFSFQEEEQIDFQEGDFFK 239 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHH--------H---------CSSCEEEEEECHH--HHHHHHHHSCC--CCSEEEEESCTTT
T ss_pred cCCeEEeeCCCCCHHHHHHHH--------h---------CCCceeEeccCHH--HHHHHHHhhhhcccCceeeecCcccc
Confidence 345899999999988766643 2 3567888889985 23333322 21112346778999998
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
..+|. .|+++....||-.+. .+-..+|+.-++-|+|||++++
T Consensus 240 ~~~~~--~D~~~~~~vlh~~~d------------------------------------~~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 240 DPLPE--ADLYILARVLHDWAD------------------------------------GKCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp SCCCC--CSEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCC--ceEEEeeeecccCCH------------------------------------HHHHHHHHHHHhhCCCCCEEEE
Confidence 76664 599999999993221 1233578888889999999998
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
.=.-.++... ......+-. +.=|+. ..--.+|.+|+++++++.| |++.++.
T Consensus 282 ~e~~~~~~~~------~~~~~~~~d-l~ml~~-------------~~g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 282 IESLLDEDRR------GPLLTQLYS-LNMLVQ-------------TEGQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp EECCCCTTSC------CCHHHHHHH-HHHHHS-------------SSCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred EEeeeCCCCC------CCHHHHHHH-HHHHHh-------------CCCcCCCHHHHHHHHHHCC-CceEEEE
Confidence 7544332211 111111111 111111 1223479999999999999 9987765
No 56
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.67 E-value=2e-07 Score=88.40 Aligned_cols=154 Identities=10% Similarity=0.094 Sum_probs=97.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc--ccceeeecCCcccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ--REYYSAGVPGSFHH 107 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~--~~~f~~~vpgSFy~ 107 (332)
..+|+|+|||+|..+..+++ . .|..++..-|+|. .-...+..... ..-.+..+.|+|..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~--------~---------~p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~v~~~~~d~~~ 240 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLR--------R---------HPQLTGQIWDLPT--TRDAARKTIHAHDLGGRVEFFEKNLLD 240 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHH--------H---------CTTCEEEEEECGG--GHHHHHHHHHHTTCGGGEEEEECCTTC
T ss_pred CCEEEEeCCCcCHHHHHHHH--------h---------CCCCeEEEEECHH--HHHHHHHHHHhcCCCCceEEEeCCccc
Confidence 68999999999998877643 1 2456777789853 33333322111 11235567888886
Q ss_pred CC-cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RL-FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~l-fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
.. ++++++|+++++..+|+++. .+...+|+.-++-|+|||+++
T Consensus 241 ~~~~~~~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l~ 284 (352)
T 3mcz_A 241 ARNFEGGAADVVMLNDCLHYFDA------------------------------------REAREVIGHAAGLVKPGGALL 284 (352)
T ss_dssp GGGGTTCCEEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEEEEEEE
T ss_pred CcccCCCCccEEEEecccccCCH------------------------------------HHHHHHHHHHHHHcCCCCEEE
Confidence 54 35567999999999997532 134457777788999999999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEE
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTV 258 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~l 258 (332)
+.-...++... ...+..+..... |+. ..-...++.+|+++++++.| |++.+.
T Consensus 285 i~e~~~~~~~~------~~~~~~~~~~~~-~~~------------~~~~~~~t~~e~~~ll~~aG-f~~~~~ 336 (352)
T 3mcz_A 285 ILTMTMNDDRV------TPALSADFSLHM-MVN------------TNHGELHPTPWIAGVVRDAG-LAVGER 336 (352)
T ss_dssp EEEECCCTTSS------SSHHHHHHHHHH-HHH------------STTCCCCCHHHHHHHHHHTT-CEEEEE
T ss_pred EEEeccCCCCC------CCchHHHhhHHH-Hhh------------CCCCCcCCHHHHHHHHHHCC-Cceeee
Confidence 88655443321 111111111111 110 00123468999999999999 998773
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.67 E-value=3.6e-07 Score=81.09 Aligned_cols=107 Identities=12% Similarity=0.211 Sum_probs=65.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+. + .+++..|.-.+-....-+..+.. ..-+..+.+.+..-
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~------------~-------~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK------------F-------KNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDISNL 96 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG------------S-------SEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCGGGC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC------------C-------CcEEEEECCHHHHHHHHHHHhhc-CCCeEEEecccccC
Confidence 4579999999999999876431 0 12333343211111111111110 01223344555554
Q ss_pred CcCCCceeEEEecC-ccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 109 LFPQSSIHFAHCSY-ALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 109 lfP~~svd~~~S~~-alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+| +++|+++++. ++||+... .|...+|+.-++-|+|||++++
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDS-----------------------------------DDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHTTEEEEEEEEE
T ss_pred Ccc-CCceEEEEcCccccccCCH-----------------------------------HHHHHHHHHHHHhcCCCcEEEE
Confidence 556 8999999998 99996321 2455678888889999999999
Q ss_pred Eecc
Q 044174 188 IMPG 191 (332)
Q Consensus 188 ~~~g 191 (332)
.+..
T Consensus 141 ~~~~ 144 (246)
T 1y8c_A 141 DINS 144 (246)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8765
No 58
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.66 E-value=2.5e-07 Score=88.76 Aligned_cols=158 Identities=16% Similarity=0.171 Sum_probs=97.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy 106 (332)
+.-+|+|+|||+|..+..+++. .|..++..-|+|. .-...+...... .--+.-+.|+|+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~v~~~~~d~~ 239 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQY-----------------NKEVEVTIVDLPQ--QLEMMRKQTAGLSGSERIHGHGANLL 239 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHH-----------------STTCEEEEEECHH--HHHHHHHHHTTCTTGGGEEEEECCCC
T ss_pred CCCEEEEeCCCcCHHHHHHHHh-----------------CCCCEEEEEeCHH--HHHHHHHHHHhcCcccceEEEEcccc
Confidence 3579999999999988776532 2456788888853 333333321111 124566888998
Q ss_pred cC--CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 107 HR--LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 107 ~~--lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
.. .+| +++|+++++..||.++. .+...+|+.-++-|+|||+
T Consensus 240 ~~~~~~p-~~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~ 282 (363)
T 3dp7_A 240 DRDVPFP-TGFDAVWMSQFLDCFSE------------------------------------EEVISILTRVAQSIGKDSK 282 (363)
T ss_dssp SSSCCCC-CCCSEEEEESCSTTSCH------------------------------------HHHHHHHHHHHHHCCTTCE
T ss_pred ccCCCCC-CCcCEEEEechhhhCCH------------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 75 477 89999999999985321 2344577777788999999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
+++.-...++... ....+.. .....+|.. ........+|.+|+++++++.| |++.++.
T Consensus 283 l~i~e~~~~~~~~-----~~~~~~~-~~~~~~~~~----------~~~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 283 VYIMETLWDRQRY-----ETASYCL-TQISLYFTA----------MANGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp EEEEECCTTSCSS-----HHHHHHH-HHHHHHHHH----------SSCSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred EEEEeeccCCccc-----cchhhHH-HHhhhhHHh----------hhCCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 9887544433211 1111111 111111100 0112234569999999999999 9887654
No 59
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.66 E-value=4.3e-07 Score=85.60 Aligned_cols=152 Identities=18% Similarity=0.115 Sum_probs=94.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-ccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~~vpgSF 105 (332)
++..+|+|+|||+|..+..+++ . .|..++..-|+| ..-...+.. ... -.--+..+.|+|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~--------~---------~p~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~ 228 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLT--------A---------HEDLSGTVLDLQ--GPASAAHRRFLDTGLSGRAQVVVGSF 228 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHH--------H---------CTTCEEEEEECH--HHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEeCCChhHHHHHHHH--------H---------CCCCeEEEecCH--HHHHHHHHhhhhcCcCcCeEEecCCC
Confidence 4468999999999987766543 1 134556666874 233333221 111 012355577888
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
+ ..+|. ++|++++..+||..+. .+...+|+.-++-|+|||++
T Consensus 229 ~-~~~p~-~~D~v~~~~vlh~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l 270 (332)
T 3i53_A 229 F-DPLPA-GAGGYVLSAVLHDWDD------------------------------------LSAVAILRRCAEAAGSGGVV 270 (332)
T ss_dssp T-SCCCC-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHTTTCEE
T ss_pred C-CCCCC-CCcEEEEehhhccCCH------------------------------------HHHHHHHHHHHHhcCCCCEE
Confidence 8 45777 8999999999996332 12345677777889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++.-.-.++..+ ...++..- |+. .....+|.+|+++++++.| |++.++...
T Consensus 271 ~i~e~~~~~~~~------~~~~d~~~-----~~~-------------~~~~~~t~~e~~~ll~~aG-f~~~~~~~~ 321 (332)
T 3i53_A 271 LVIEAVAGDEHA------GTGMDLRM-----LTY-------------FGGKERSLAELGELAAQAG-LAVRAAHPI 321 (332)
T ss_dssp EEEECCCC---C------CHHHHHHH-----HHH-------------HSCCCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred EEEeecCCCCCc------cHHHHHHH-----Hhh-------------CCCCCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 997654433211 11112111 111 1224578999999999999 998877643
No 60
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.65 E-value=5.8e-07 Score=86.38 Aligned_cols=153 Identities=18% Similarity=0.200 Sum_probs=97.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
++..+|+|+|||+|..+..+++. .|..+++.-|+| +.-...+.. .... .--+..+.|+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~--~~~~~a~~~~~~~~l~~~v~~~~~d~ 261 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDA-----------------FPGLRGTLLERP--PVAEEARELLTGRGLADRCEILPGDF 261 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECH--HHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred ccCcEEEEeCCCccHHHHHHHHH-----------------CCCCeEEEEcCH--HHHHHHHHhhhhcCcCCceEEeccCC
Confidence 45689999999999877665431 245677777884 333333321 1110 12355677888
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
+ ..+|. ++|++++..+||+.+. .+...+|+.-++-|+|||++
T Consensus 262 ~-~~~p~-~~D~v~~~~vlh~~~d------------------------------------~~~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 262 F-ETIPD-GADVYLIKHVLHDWDD------------------------------------DDVVRILRRIATAMKPDSRL 303 (369)
T ss_dssp T-TCCCS-SCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCCTTCEE
T ss_pred C-CCCCC-CceEEEhhhhhccCCH------------------------------------HHHHHHHHHHHHHcCCCCEE
Confidence 8 56777 8999999999997433 12235677777899999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
++.-.-.++... . . ..+.++.--.. . .-..+|.+|+++++++.| |++.++..
T Consensus 304 ~i~e~~~~~~~~------~--~----~~~~d~~~~~~--------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 304 LVIDNLIDERPA------A--S----TLFVDLLLLVL--------V--GGAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp EEEEEBCCSSCC------H--H----HHHHHHHHHHH--------H--SCCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred EEEEeccCCCCC------C--c----hhHhhHHHHhh--------c--CCccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 997655443221 1 1 11222211000 0 123578999999999999 99988864
No 61
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.62 E-value=6.8e-07 Score=83.82 Aligned_cols=158 Identities=13% Similarity=0.080 Sum_probs=97.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSF 105 (332)
.+..+|+|+|||+|..+..+.+. .|..+++..|++ +.-...+...... .--+..+.+++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~ 224 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQH-----------------NPNAEIFGVDWA--SVLEVAKENARIQGVASRYHTIAGSA 224 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHH-----------------CTTCEEEEEECH--HHHHHHHHHHHHHTCGGGEEEEESCT
T ss_pred CCCCEEEEECCCcCHHHHHHHHH-----------------CCCCeEEEEecH--HHHHHHHHHHHhcCCCcceEEEeccc
Confidence 44579999999999877665431 134678888887 5544444321110 11244567788
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
....+|.+ +|+++++..+|.++. .+...+|+.-++-|+|||++
T Consensus 225 ~~~~~~~~-~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l 267 (335)
T 2r3s_A 225 FEVDYGND-YDLVLLPNFLHHFDV------------------------------------ATCEQLLRKIKTALAVEGKV 267 (335)
T ss_dssp TTSCCCSC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred ccCCCCCC-CcEEEEcchhccCCH------------------------------------HHHHHHHHHHHHhCCCCcEE
Confidence 77656665 999999999997422 23445677777889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++.-...++... ...+..+...+. +.. .-....++.+|+++++++.| |++.++..+
T Consensus 268 ~i~e~~~~~~~~------~~~~~~~~~~~~-~~~------------~~~~~~~t~~~~~~ll~~aG-f~~~~~~~~ 323 (335)
T 2r3s_A 268 IVFDFIPNSDRI------TPPDAAAFSLVM-LAT------------TPNGDAYTFAEYESMFSNAG-FSHSQLHSL 323 (335)
T ss_dssp EEEECCCCTTSS------CSHHHHHHHHHH-HHH------------SSSCCCCCHHHHHHHHHHTT-CSEEEEECC
T ss_pred EEEeecCCCCcC------CchHHHHHHHHH-Hee------------CCCCCcCCHHHHHHHHHHCC-CCeeeEEEC
Confidence 888665543211 011111111111 110 00124569999999999999 988776543
No 62
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.60 E-value=1e-06 Score=77.41 Aligned_cols=153 Identities=13% Similarity=0.057 Sum_probs=83.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc-----cceeeecCCc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR-----EYYSAGVPGS 104 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~-----~~f~~~vpgS 104 (332)
..+|+|+|||+|..+..+.+. .+..+|+--|.-..--...-+.+.... ..-+..+-++
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 92 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKD-----------------SFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGA 92 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHC-----------------TTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECC
T ss_pred CCEEEEeCCCCCHHHHHHHhh-----------------CCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCC
Confidence 469999999999998876531 112344444442211111111111100 0012223334
Q ss_pred cccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 105 FHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 105 Fy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
+....++.+++|+++|+.++||+.. .++..+|+.-++-|+|||.
T Consensus 93 ~~~~~~~~~~fD~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~ 136 (217)
T 3jwh_A 93 LTYQDKRFHGYDAATVIEVIEHLDL------------------------------------SRLGAFERVLFEFAQPKIV 136 (217)
T ss_dssp TTSCCGGGCSCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHTTTCCSEE
T ss_pred cccccccCCCcCEEeeHHHHHcCCH------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 4344456689999999999999732 1345677777788999997
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHH----HHHHhCCceEEeEEEE
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMV----KLVDKNGHFSIKTVEL 260 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~----~~ie~~G~F~I~~le~ 260 (332)
++++.... .. ..+..+.. +.. ...-..++.+.+|++ .++++.| |+|+....
T Consensus 137 li~~~~~~----------~~-------~~~~~~~~-~~~------~~~~~~~~~~~~~l~~~~~~~~~~~G-f~v~~~~~ 191 (217)
T 3jwh_A 137 IVTTPNIE----------YN-------VKFANLPA-GKL------RHKDHRFEWTRSQFQNWANKITERFA-YNVQFQPI 191 (217)
T ss_dssp EEEEEBHH----------HH-------HHTC------------------CCSCBCHHHHHHHHHHHHHHSS-EEEEECCC
T ss_pred EEEccCcc----------cc-------hhhccccc-ccc------cccccccccCHHHHHHHHHHHHHHcC-ceEEEEec
Confidence 76654210 01 11111100 100 111234567899999 8888999 98865543
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.59 E-value=1.4e-07 Score=87.54 Aligned_cols=121 Identities=9% Similarity=0.079 Sum_probs=67.5
Q ss_pred cCCccccCCcCCCceeEEE-ecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044174 101 VPGSFHHRLFPQSSIHFAH-CSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEI 179 (332)
Q Consensus 101 vpgSFy~~lfP~~svd~~~-S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL 179 (332)
+.+++..-.+ ++++|+|+ ++.++||++. .|...+|+.-++-|
T Consensus 138 ~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L 180 (299)
T 3g2m_A 138 VQGDMSAFAL-DKRFGTVVISSGSINELDE------------------------------------ADRRGLYASVREHL 180 (299)
T ss_dssp EECBTTBCCC-SCCEEEEEECHHHHTTSCH------------------------------------HHHHHHHHHHHHHE
T ss_pred EeCchhcCCc-CCCcCEEEECCcccccCCH------------------------------------HHHHHHHHHHHHHc
Confidence 3344444333 67999877 5678888532 24456777778889
Q ss_pred ccCCeEEEEecccCCCCCCCCcchhHHHHH-HHHHHHHHHHhhccc---------------hhhhcccCcCcccCCHHHH
Q 044174 180 VSGGMMVIIMPGIPYGMPYSHLTNGVMYDL-MATIFMELANEQLIT---------------EAELDSFNLPIYSASSEEM 243 (332)
Q Consensus 180 ~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~-l~~al~~mv~eGli~---------------~e~~d~fn~P~y~ps~~E~ 243 (332)
+|||++++............. .....+.. -...+. ....... ......+...+++.+.+|+
T Consensus 181 ~pgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el 257 (299)
T 3g2m_A 181 EPGGKFLLSLAMSEAAESEPL-ERKQELPGRSGRRYV--LHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQV 257 (299)
T ss_dssp EEEEEEEEEEECCHHHHSCCC-CC---------------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHH
T ss_pred CCCcEEEEEeecCccccccch-hccceeecCCCcEEE--EEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHH
Confidence 999999999887643210000 00000000 000000 0000000 0011123345567899999
Q ss_pred HHHHHhCCceEEeEEEEeC
Q 044174 244 VKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 244 ~~~ie~~G~F~I~~le~~~ 262 (332)
++++++.| |++..++.+.
T Consensus 258 ~~ll~~aG-F~v~~~~~~~ 275 (299)
T 3g2m_A 258 VRELVRSG-FDVIAQTPFA 275 (299)
T ss_dssp HHHHHHTT-CEEEEEEEEC
T ss_pred HHHHHHCC-CEEEEEEecC
Confidence 99999999 9999999776
No 64
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.58 E-value=6.4e-07 Score=85.51 Aligned_cols=156 Identities=14% Similarity=0.165 Sum_probs=93.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
.+..+|+|+|||+|..++.+.+. .|..+++.-|+| +.-...+.. .... .--+..+.++|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~-----------------~~~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~ 241 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALR-----------------APHLRGTLVELA--GPAERARRRFADAGLADRVTVAEGDF 241 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECH--HHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEECCCcCHHHHHHHHH-----------------CCCCEEEEEeCH--HHHHHHHHHHHhcCCCCceEEEeCCC
Confidence 44679999999999877766432 134677778872 333333321 1110 11244566777
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.+ .+|.+ +|+++++..+|+++. .+...+|+.-.+-|+|||++
T Consensus 242 ~~-~~~~~-~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l 283 (374)
T 1qzz_A 242 FK-PLPVT-ADVVLLSFVLLNWSD------------------------------------EDALTILRGCVRALEPGGRL 283 (374)
T ss_dssp TS-CCSCC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred CC-cCCCC-CCEEEEeccccCCCH------------------------------------HHHHHHHHHHHHhcCCCcEE
Confidence 76 45664 999999999986432 12235666667889999999
Q ss_pred EEEec--ccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 186 VIIMP--GIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 186 vl~~~--gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
++.-. ..++.. ...+..+...+. ++..| ...++.+|+++++++.| |++.++....
T Consensus 284 ~i~e~~~~~~~~~-------~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 340 (374)
T 1qzz_A 284 LVLDRADVEGDGA-------DRFFSTLLDLRM-LTFMG-------------GRVRTRDEVVDLAGSAG-LALASERTSG 340 (374)
T ss_dssp EEEECCH--------------HHHHHHHHHHH-HHHHS-------------CCCCCHHHHHHHHHTTT-EEEEEEEEEC
T ss_pred EEEechhhcCCCC-------CcchhhhcchHH-HHhCC-------------CcCCCHHHHHHHHHHCC-CceEEEEECC
Confidence 98765 322211 111111111111 11111 24579999999999999 9998887664
No 65
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.57 E-value=1.8e-07 Score=81.83 Aligned_cols=156 Identities=14% Similarity=0.081 Sum_probs=86.2
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc-C
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH-R 108 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~-~ 108 (332)
..+|+|+|||+|..+..+.+. ..+|+.-|.-. ......+... ...+..+-...+-. .
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-------------------~~~v~~vD~s~-~~~~~a~~~~--~~~~~~~~~~~~~~~~ 110 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-------------------GIEAVGVDGDR-TLVDAARAAG--AGEVHLASYAQLAEAK 110 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-------------------TCEEEEEESCH-HHHHHHHHTC--SSCEEECCHHHHHTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHC-------------------CCEEEEEcCCH-HHHHHHHHhc--ccccchhhHHhhcccc
Confidence 489999999999988766432 12344444321 1112222221 11111111111111 1
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
..+.+++|+++|+.++| ... | ..+|+.-++-|+|||++++.
T Consensus 111 ~~~~~~fD~v~~~~~l~-~~~-~-------------------------------------~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 111 VPVGKDYDLICANFALL-HQD-I-------------------------------------IELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp SCCCCCEEEEEEESCCC-SSC-C-------------------------------------HHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCccEEEECchhh-hhh-H-------------------------------------HHHHHHHHHHhCCCeEEEEE
Confidence 23455699999999999 211 1 13566666889999999999
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.......... . +...|....-.|.. -.-...+++++|.+|++.++++.| |++..++..
T Consensus 152 ~~~~~~~~~~-~---------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 209 (227)
T 3e8s_A 152 TLHPWSVADG-D---------YQDGWREESFAGFA----GDWQPMPWYFRTLASWLNALDMAG-LRLVSLQEP 209 (227)
T ss_dssp ECCTTTTCTT-C---------CSCEEEEECCTTSS----SCCCCEEEEECCHHHHHHHHHHTT-EEEEEEECC
T ss_pred ecCccccCcc-c---------cccccchhhhhccc----cCcccceEEEecHHHHHHHHHHcC-CeEEEEecC
Confidence 8765432110 0 00000000000000 001246788999999999999999 999988864
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.57 E-value=6.7e-07 Score=79.44 Aligned_cols=169 Identities=18% Similarity=0.169 Sum_probs=91.9
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+. + . -+|+..|.-. +.-...+...... -+..+.+++...
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~------------~-----~-~~v~~vD~s~-~~~~~a~~~~~~~--~~~~~~~d~~~~ 101 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH------------G-----A-SYVLGLDLSE-KMLARARAAGPDT--GITYERADLDKL 101 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------T-----C-SEEEEEESCH-HHHHHHHHTSCSS--SEEEEECCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHC------------C-----C-CeEEEEcCCH-HHHHHHHHhcccC--CceEEEcChhhc
Confidence 4579999999999988766432 1 0 1444444321 1222222211111 123344566666
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+|++++|+++++.++||+.. ...+|+.-++-|+|||++++.
T Consensus 102 ~~~~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 102 HLPQDSFDLAYSSLALHYVED--------------------------------------VARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp CCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCCceEEEEeccccccch--------------------------------------HHHHHHHHHHhcCcCcEEEEE
Confidence 678999999999999999642 113556666789999999998
Q ss_pred ecccCCCCCCCCcc----hhH-HHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeCC
Q 044174 189 MPGIPYGMPYSHLT----NGV-MYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTNP 263 (332)
Q Consensus 189 ~~gr~~~~~~~~~~----~~~-~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~p 263 (332)
.............. .+. .+ .+.....++.....-+ .-....|.+|.+|+++++++.| |++..++...|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~~~ 216 (243)
T 3bkw_A 144 TEHPIYMAPARPGWAIDAEGRRTW-----PIDRYLVEGPRKTDWL-AKGVVKHHRTVGTTLNALIRSG-FAIEHVEEFCP 216 (243)
T ss_dssp EECHHHHCCSSCSCEECTTSCEEE-----EECCTTCCEEECTTHH-HHSCCEEECCHHHHHHHHHHTT-CEEEEEEECCC
T ss_pred eCCcccccCcCcceeecCCCceEE-----eecccccccceeeeec-cCceEEEeccHHHHHHHHHHcC-CEeeeeccCCC
Confidence 75321000000000 000 00 0000000000000000 0034567789999999999999 99988876543
No 67
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.57 E-value=4e-07 Score=82.52 Aligned_cols=105 Identities=12% Similarity=0.167 Sum_probs=65.2
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+... + .+|+..|+-. +.....+.... + +..+-+.+..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~------------~-------~~v~gvD~s~-~~~~~a~~~~~--~--~~~~~~d~~~ 104 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS------------F-------GTVEGLELSA-DMLAIARRRNP--D--AVLHHGDMRD 104 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT------------S-------SEEEEEESCH-HHHHHHHHHCT--T--SEEEECCTTT
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc------------C-------CeEEEEECCH-HHHHHHHhhCC--C--CEEEECChHH
Confidence 44579999999999988776321 0 1344444321 12222222111 1 2223445544
Q ss_pred CCcCCCceeEEEecC-ccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RLFPQSSIHFAHCSY-ALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~lfP~~svd~~~S~~-alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
-.+ ++++|+|+|+. ++||+.. ..|+..+|+.-++-|+|||+++
T Consensus 105 ~~~-~~~fD~v~~~~~~l~~~~~-----------------------------------~~~~~~~l~~~~~~L~pgG~l~ 148 (263)
T 3pfg_A 105 FSL-GRRFSAVTCMFSSIGHLAG-----------------------------------QAELDAALERFAAHVLPDGVVV 148 (263)
T ss_dssp CCC-SCCEEEEEECTTGGGGSCH-----------------------------------HHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCc-cCCcCEEEEcCchhhhcCC-----------------------------------HHHHHHHHHHHHHhcCCCcEEE
Confidence 333 78999999998 9999643 1255567888889999999999
Q ss_pred EEeccc
Q 044174 187 IIMPGI 192 (332)
Q Consensus 187 l~~~gr 192 (332)
+.....
T Consensus 149 i~~~~~ 154 (263)
T 3pfg_A 149 VEPWWF 154 (263)
T ss_dssp ECCCCC
T ss_pred EEeccC
Confidence 975443
No 68
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.55 E-value=3.2e-06 Score=79.51 Aligned_cols=151 Identities=19% Similarity=0.201 Sum_probs=93.8
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-cceeeecCCccccC
Q 044174 31 IRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-EYYSAGVPGSFHHR 108 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-~~f~~~vpgSFy~~ 108 (332)
.+|+|+|||+|..+..+++ . .|..+++.-|+|. .-...+. +.... .--+..+.|+|.+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~--------~---------~p~~~~~~~D~~~--~~~~a~~~~~~~~~~~~v~~~~~d~~~- 228 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQ--------A---------EPSARGVMLDREG--SLGVARDNLSSLLAGERVSLVGGDMLQ- 228 (334)
T ss_dssp CEEEEETCTTCHHHHHHHH--------H---------CTTCEEEEEECTT--CTHHHHHHTHHHHHTTSEEEEESCTTT-
T ss_pred CEEEEeCCCchHHHHHHHH--------H---------CCCCEEEEeCcHH--HHHHHHHHHhhcCCCCcEEEecCCCCC-
Confidence 8999999999987776643 1 2356788889843 2332222 21110 1125557788887
Q ss_pred CcCCCceeEEEecCccc-cccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 109 LFPQSSIHFAHCSYALH-WLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 109 lfP~~svd~~~S~~alH-WLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+| +++|+++++..+| | +. .+...+|+.-++-|+|||++++
T Consensus 229 ~~~-~~~D~v~~~~vl~~~-~~------------------------------------~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 229 EVP-SNGDIYLLSRIIGDL-DE------------------------------------AASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp CCC-SSCSEEEEESCGGGC-CH------------------------------------HHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCC-CCCCEEEEchhccCC-CH------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 467 6899999999998 6 11 1223567777788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
.-...++... . .....++ . .-|... .-..++.+|+++++++.| |++.++...
T Consensus 271 ~e~~~~~~~~--~-~~~~~~~----~-~~~~~~-------------~~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 271 IERTISASEP--S-PMSVLWD----V-HLFMAC-------------AGRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp EECCBCSSSC--C-HHHHHHH----H-HHHHHH-------------SCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEeccCCCCC--c-chhHHhh----h-HhHhhC-------------CCcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 8655443221 0 0111111 1 111110 123458999999999999 998877644
No 69
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.54 E-value=1.3e-06 Score=75.80 Aligned_cols=141 Identities=11% Similarity=0.009 Sum_probs=85.8
Q ss_pred EEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCCcC
Q 044174 32 RLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRLFP 111 (332)
Q Consensus 32 ~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~lfP 111 (332)
+|+|+|||+|..+..+.+. ..+|+..|.-.. .-...+........-+..+.+++..-.+|
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-------------------~~~v~~vD~s~~-~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 91 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-------------------GYEVTAVDQSSV-GLAKAKQLAQEKGVKITTVQSNLADFDIV 91 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-------------------TCEEEEECSSHH-HHHHHHHHHHHHTCCEEEECCBTTTBSCC
T ss_pred CEEEECCCCCHhHHHHHhC-------------------CCeEEEEECCHH-HHHHHHHHHHhcCCceEEEEcChhhcCCC
Confidence 9999999999998776431 013444443211 11111111000001223344555555578
Q ss_pred CCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 112 QSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 112 ~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
++++|+++++. .|| +. .|...+|+.-.+-|+|||++++....
T Consensus 92 ~~~fD~v~~~~-~~~----~~---------------------------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 92 ADAWEGIVSIF-CHL----PS---------------------------------SLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp TTTCSEEEEEC-CCC----CH---------------------------------HHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred cCCccEEEEEh-hcC----CH---------------------------------HHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 89999999954 454 10 23455677777889999999999877
Q ss_pred cCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 192 IPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 192 r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
..+.. + ..| ....+.++.+.+|++++++ | |+|..++...
T Consensus 134 ~~~~~----------~-----------~~~--------~~~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~ 172 (202)
T 2kw5_A 134 PEQLQ----------Y-----------NTG--------GPKDLDLLPKLETLQSELP--S-LNWLIANNLE 172 (202)
T ss_dssp TTTGG----------G-----------TSC--------CSSSGGGCCCHHHHHHHCS--S-SCEEEEEEEE
T ss_pred ccccc----------C-----------CCC--------CCCcceeecCHHHHHHHhc--C-ceEEEEEEEE
Confidence 54310 0 001 1124578999999999999 8 9999988765
No 70
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.52 E-value=1.1e-06 Score=84.32 Aligned_cols=152 Identities=17% Similarity=0.094 Sum_probs=93.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+.+. .|.++++.-|+| +.....+.+ .. +..+.|+|+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~-----------------~~~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d~~~ 263 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISK-----------------YPLIKGINFDLP--QVIENAPPL---SG--IEHVGGDMFA 263 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECH--HHHTTCCCC---TT--EEEEECCTTT
T ss_pred CCCCEEEEeCCCCcHHHHHHHHH-----------------CCCCeEEEeChH--HHHHhhhhc---CC--CEEEeCCccc
Confidence 44679999999999988776431 235677777773 222222222 12 5567788888
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+|. +|+++++.+||+++. .+...+|+.-++-|+|||++++
T Consensus 264 -~~~~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 264 -SVPQ--GDAMILKAVCHNWSD------------------------------------EKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp -CCCC--EEEEEEESSGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCC--CCEEEEecccccCCH------------------------------------HHHHHHHHHHHHhcCCCCEEEE
Confidence 5776 899999999997433 1223567777788999999998
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
.-...++... .. ..+.. ..+.++.--.. . -...++.+|+++++++.| |++.++..
T Consensus 305 ~e~~~~~~~~-----~~-~~~~~-~~~~d~~~~~~------~----~~~~~t~~e~~~ll~~aG-f~~~~~~~ 359 (372)
T 1fp1_D 305 VEFILPEEPN-----TS-EESKL-VSTLDNLMFIT------V----GGRERTEKQYEKLSKLSG-FSKFQVAC 359 (372)
T ss_dssp EEEEECSSCC-----SS-HHHHH-HHHHHHHHHHH------H----SCCCEEHHHHHHHHHHTT-CSEEEEEE
T ss_pred EEeccCCCCc-----cc-hHHHH-HHHhhHHHHhc------c----CCccCCHHHHHHHHHHCC-CceEEEEE
Confidence 8544333211 00 11101 11112110000 0 012359999999999999 98877764
No 71
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.52 E-value=1.3e-06 Score=82.94 Aligned_cols=156 Identities=15% Similarity=0.100 Sum_probs=95.0
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-ccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~~vpgSF 105 (332)
.+..+|+|+|||+|..+..+.+. .|.++++.-|+| +.-...+.. ... ..--+.-+.+++
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~-----------------~~~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~ 242 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARR-----------------APHVSATVLEMA--GTVDTARSYLKDEGLSDRVDVVEGDF 242 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHH-----------------CTTCEEEEEECT--THHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred ccCcEEEEeCCcCcHHHHHHHHh-----------------CCCCEEEEecCH--HHHHHHHHHHHhcCCCCceEEEeCCC
Confidence 34579999999999988776431 135677788883 344433322 111 011244566777
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.+ .+|.+ +|+++++..+|.++. .+...+|+.-++-|+|||++
T Consensus 243 ~~-~~~~~-~D~v~~~~vl~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~l 284 (360)
T 1tw3_A 243 FE-PLPRK-ADAIILSFVLLNWPD------------------------------------HDAVRILTRCAEALEPGGRI 284 (360)
T ss_dssp TS-CCSSC-EEEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTEEEEEEE
T ss_pred CC-CCCCC-ccEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhcCCCcEE
Confidence 76 45654 999999999986321 12235666667889999999
Q ss_pred EEEecc-cCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 186 VIIMPG-IPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 186 vl~~~g-r~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
++.-.. .++... . .+..+.... -|+..| ...++.+|+++++++.| |++.++....
T Consensus 285 ~i~e~~~~~~~~~------~-~~~~~~~~~-~~~~~~-------------~~~~t~~e~~~ll~~aG-f~~~~~~~~~ 340 (360)
T 1tw3_A 285 LIHERDDLHENSF------N-EQFTELDLR-MLVFLG-------------GALRTREKWDGLAASAG-LVVEEVRQLP 340 (360)
T ss_dssp EEEECCBCGGGCC------S-HHHHHHHHH-HHHHHS-------------CCCCBHHHHHHHHHHTT-EEEEEEEEEE
T ss_pred EEEEEeccCCCCC------c-chhhhccHH-HhhhcC-------------CcCCCHHHHHHHHHHCC-CeEEEEEeCC
Confidence 987554 332210 0 111111111 111111 24579999999999999 9998877654
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.50 E-value=1.1e-06 Score=74.93 Aligned_cols=129 Identities=12% Similarity=0.111 Sum_probs=80.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+...+|+|+|||+|..+..+... + .+++..|.-. +.-...+.... + +..+.+++..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~------------~-------~~v~~~D~~~-~~~~~a~~~~~--~--~~~~~~d~~~ 100 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ------------G-------HDVLGTDLDP-ILIDYAKQDFP--E--ARWVVGDLSV 100 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT------------T-------CEEEEEESCH-HHHHHHHHHCT--T--SEEEECCTTT
T ss_pred cCCCeEEEECCCCCHHHHHHHHC------------C-------CcEEEEcCCH-HHHHHHHHhCC--C--CcEEEccccc
Confidence 34579999999999988876532 0 1233333221 11111111101 1 1223344444
Q ss_pred CCcCCCceeEEEec-CccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RLFPQSSIHFAHCS-YALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~lfP~~svd~~~S~-~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
..+|++++|+++++ ..+|+++. .+...+|+.-.+-|+|||+++
T Consensus 101 ~~~~~~~~D~i~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~l~~~G~l~ 144 (195)
T 3cgg_A 101 DQISETDFDLIVSAGNVMGFLAE------------------------------------DGREPALANIHRALGADGRAV 144 (195)
T ss_dssp SCCCCCCEEEEEECCCCGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCCCCceeEEEECCcHHhhcCh------------------------------------HHHHHHHHHHHHHhCCCCEEE
Confidence 45678899999998 67877532 133456777778899999999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
+.+.... ..+.+++...+++.| |++..+..
T Consensus 145 ~~~~~~~-------------------------------------------~~~~~~~~~~l~~~G-f~~~~~~~ 174 (195)
T 3cgg_A 145 IGFGAGR-------------------------------------------GWVFGDFLEVAERVG-LELENAFE 174 (195)
T ss_dssp EEEETTS-------------------------------------------SCCHHHHHHHHHHHT-EEEEEEES
T ss_pred EEeCCCC-------------------------------------------CcCHHHHHHHHHHcC-CEEeeeec
Confidence 9874311 047889999999999 88877763
No 73
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.50 E-value=4.1e-06 Score=73.56 Aligned_cols=154 Identities=16% Similarity=0.106 Sum_probs=86.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-----cceeeecCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-----EYYSAGVPG 103 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-----~~f~~~vpg 103 (332)
..+|+|+|||+|..+..+.+. .+..+|+--|.-.. .-...+. +.... ..-+.-+-+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKD-----------------KSFEQITGVDVSYS-VLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTS-----------------TTCCEEEEEESCHH-HHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHhc-----------------CCCCEEEEEECCHH-HHHHHHHHHHhhccccccCcceEEEeC
Confidence 469999999999988776421 12245555554321 1111111 11100 001222334
Q ss_pred ccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044174 104 SFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGG 183 (332)
Q Consensus 104 SFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG 183 (332)
++....++.+++|+|+++.++||+.. .++..+|+.-++-|+|||
T Consensus 92 d~~~~~~~~~~fD~V~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~LkpgG 135 (219)
T 3jwg_A 92 SLVYRDKRFSGYDAATVIEVIEHLDE------------------------------------NRLQAFEKVLFEFTRPQT 135 (219)
T ss_dssp CSSSCCGGGTTCSEEEEESCGGGCCH------------------------------------HHHHHHHHHHHTTTCCSE
T ss_pred cccccccccCCCCEEEEHHHHHhCCH------------------------------------HHHHHHHHHHHHhhCCCE
Confidence 44455567789999999999999732 134567777788999999
Q ss_pred eEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHH----HHHHhCCceEEeEEE
Q 044174 184 MMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMV----KLVDKNGHFSIKTVE 259 (332)
Q Consensus 184 ~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~----~~ie~~G~F~I~~le 259 (332)
.++.+....-+.. ... +. .+.. ...-..++.+.+|++ .++++.| |+|+...
T Consensus 136 ~~i~~~~~~~~~~-~~~---------~~--------~~~~------~~~~~~~~~~~~~l~~~~~~l~~~~G-f~v~~~~ 190 (219)
T 3jwg_A 136 VIVSTPNKEYNFH-YGN---------LF--------EGNL------RHRDHRFEWTRKEFQTWAVKVAEKYG-YSVRFLQ 190 (219)
T ss_dssp EEEEEEBGGGGGC-CCC---------T-------------------GGGCCTTSBCHHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred EEEEccchhhhhh-hcc---------cC--------cccc------cccCceeeecHHHHHHHHHHHHHHCC-cEEEEEe
Confidence 6665543221110 000 00 0000 011234556889999 7788899 9987776
Q ss_pred EeC
Q 044174 260 LTN 262 (332)
Q Consensus 260 ~~~ 262 (332)
.-+
T Consensus 191 ~g~ 193 (219)
T 3jwg_A 191 IGE 193 (219)
T ss_dssp ESC
T ss_pred cCC
Confidence 544
No 74
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.48 E-value=3.8e-07 Score=80.00 Aligned_cols=113 Identities=18% Similarity=0.206 Sum_probs=74.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+. .+|+..|.... . +..+.+.+..
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----------------------~~v~~~D~s~~------------~---~~~~~~d~~~ 108 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----------------------NPVHCFDLASL------------D---PRVTVCDMAQ 108 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----------------------SCEEEEESSCS------------S---TTEEESCTTS
T ss_pred CCCCeEEEECCcCCHHHHHhh----------------------ccEEEEeCCCC------------C---ceEEEecccc
Confidence 345789999999999876551 12233333332 0 1112334444
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
..+|++++|+++++.++|| .. ...+|+.-++-|+|||++++
T Consensus 109 ~~~~~~~fD~v~~~~~l~~--~~-------------------------------------~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 109 VPLEDESVDVAVFCLSLMG--TN-------------------------------------IRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp CSCCTTCEEEEEEESCCCS--SC-------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCEeEEEEehhccc--cC-------------------------------------HHHHHHHHHHhCCCCeEEEE
Confidence 4578899999999999996 11 12345555677899999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
..... .+++.+++.+.+++.| |++.....
T Consensus 150 ~~~~~-------------------------------------------~~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 150 AEVSS-------------------------------------------RFEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp EECGG-------------------------------------------GCSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred EEcCC-------------------------------------------CCCCHHHHHHHHHHCC-CEEEEEec
Confidence 75321 0128999999999999 98877653
No 75
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.47 E-value=3.5e-06 Score=70.90 Aligned_cols=134 Identities=10% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..+..+.+.. . +|+.-|.-. +.....+.. ..++ ..+-++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~------------------~-~v~~vD~s~-~~~~~a~~~--~~~v--~~~~~d--- 68 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA------------------T-KLYCIDINV-IALKEVKEK--FDSV--ITLSDP--- 68 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE------------------E-EEEEECSCH-HHHHHHHHH--CTTS--EEESSG---
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc------------------C-eEEEEeCCH-HHHHHHHHh--CCCc--EEEeCC---
Confidence 446899999999999997764321 1 334444321 111111111 0111 112222
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.-+|++++|+++++.++||+.. ...+|+.-.+-|+|||++++
T Consensus 69 ~~~~~~~~D~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 69 KEIPDNSVDFILFANSFHDMDD--------------------------------------KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp GGSCTTCEEEEEEESCSTTCSC--------------------------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCceEEEEEccchhcccC--------------------------------------HHHHHHHHHHhcCCCCEEEE
Confidence 4468899999999999999732 12355556678899999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
......+..... ......+.+|++.+++ | |++.+...+.
T Consensus 111 ~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~l~--G-f~~~~~~~~~ 149 (170)
T 3i9f_A 111 IDWRKENTGIGP---------------------------------PLSIRMDEKDYMGWFS--N-FVVEKRFNPT 149 (170)
T ss_dssp EEECSSCCSSSS---------------------------------CGGGCCCHHHHHHHTT--T-EEEEEEECSS
T ss_pred EEcCccccccCc---------------------------------hHhhhcCHHHHHHHHh--C-cEEEEccCCC
Confidence 976654321100 0123358999999999 8 9988877554
No 76
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.46 E-value=2.4e-06 Score=81.37 Aligned_cols=158 Identities=11% Similarity=0.112 Sum_probs=97.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-ccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~-~~~f~~~vpgSF 105 (332)
++..+|+|+|||+|..+..+.+. .|..+++.-|+| ......+.. ... .+--+..+.|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~--~~~~~a~~~~~~~~~~~~v~~~~~d~ 249 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKH-----------------FPELDSTILNLP--GAIDLVNENAAEKGVADRMRGIAVDI 249 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHH-----------------CTTCEEEEEECG--GGHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred CCCCEEEEECCcccHHHHHHHHH-----------------CCCCeEEEEecH--HHHHHHHHHHHhcCCCCCEEEEeCcc
Confidence 44679999999999988776442 135677788883 333333321 111 011245577888
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
....+|+. |+++++..+|.++. .+...+|+.-++-|+|||++
T Consensus 250 ~~~~~~~~--D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~pgG~l 291 (359)
T 1x19_A 250 YKESYPEA--DAVLFCRILYSANE------------------------------------QLSTIMCKKAFDAMRSGGRL 291 (359)
T ss_dssp TTSCCCCC--SEEEEESCGGGSCH------------------------------------HHHHHHHHHHHTTCCTTCEE
T ss_pred ccCCCCCC--CEEEEechhccCCH------------------------------------HHHHHHHHHHHHhcCCCCEE
Confidence 87777766 99999999984321 23456777778899999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++.-...++.. .. . +..+ + .|... ...-.....+++.+|+++++++.| |++.++..+
T Consensus 292 ~i~e~~~~~~~--~~-~----~~~~---~-~~~~~-------~~~g~~~~~~~t~~e~~~ll~~aG-f~~v~~~~~ 348 (359)
T 1x19_A 292 LILDMVIDDPE--NP-N----FDYL---S-HYILG-------AGMPFSVLGFKEQARYKEILESLG-YKDVTMVRK 348 (359)
T ss_dssp EEEEECCCCTT--SC-C----HHHH---H-HHGGG-------GGSSCCCCCCCCGGGHHHHHHHHT-CEEEEEEEE
T ss_pred EEEecccCCCC--Cc-h----HHHH---H-HHHHh-------cCCCCcccCCCCHHHHHHHHHHCC-CceEEEEec
Confidence 77655443321 00 1 1111 1 22110 000111234589999999999999 998777654
No 77
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.45 E-value=1.3e-06 Score=74.93 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=77.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccc-eeeecCCccccC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREY-YSAGVPGSFHHR 108 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~-f~~~vpgSFy~~ 108 (332)
.-+|+|+|||+|..+..+.+. ..+|+..|.-.. .-...+........ -+..+.+.+...
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-------------------~~~v~~vD~s~~-~~~~a~~~~~~~~~~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-------------------GYDVDAWDKNAM-SIANVERIKSIENLDNLHTRVVDLNNL 92 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-------------------TCEEEEEESCHH-HHHHHHHHHHHHTCTTEEEEECCGGGC
T ss_pred CCeEEEEcCCCCHHHHHHHHC-------------------CCeEEEEECCHH-HHHHHHHHHHhCCCCCcEEEEcchhhC
Confidence 459999999999998877532 012233332111 01111110000000 022233344443
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+ ++++|+++++.++||+.. .|+..+|+.-.+-|+|||++++.
T Consensus 93 ~~-~~~~D~v~~~~~l~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 93 TF-DRQYDFILSTVVLMFLEA------------------------------------KTIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp CC-CCCEEEEEEESCGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CC-CCCceEEEEcchhhhCCH------------------------------------HHHHHHHHHHHHhcCCCeEEEEE
Confidence 34 789999999999999742 12334667777889999998776
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
........+ . + ....+..+.+|+++.++. |++...+
T Consensus 136 ~~~~~~~~~------~----------------~----------~~~~~~~~~~~l~~~~~~---f~~~~~~ 171 (199)
T 2xvm_A 136 AAMDTADYP------C----------------T----------VGFPFAFKEGELRRYYEG---WERVKYN 171 (199)
T ss_dssp EEBCCSSSC------C----------------C----------SCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred EeeccCCcC------C----------------C----------CCCCCccCHHHHHHHhcC---CeEEEec
Confidence 443221110 0 0 012245688999999875 8887776
No 78
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.44 E-value=1.5e-06 Score=73.91 Aligned_cols=117 Identities=12% Similarity=0.088 Sum_probs=75.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
...-+|+|+||+... +-+-...++..+++... .+.+...|. .+
T Consensus 11 ~~g~~vL~~~~g~v~--vD~s~~ml~~a~~~~~~--------~~~~~~~d~---------------------------~~ 53 (176)
T 2ld4_A 11 SAGQFVAVVWDKSSP--VEALKGLVDKLQALTGN--------EGRVSVENI---------------------------KQ 53 (176)
T ss_dssp CTTSEEEEEECTTSC--HHHHHHHHHHHHHHTTT--------TSEEEEEEG---------------------------GG
T ss_pred CCCCEEEEecCCcee--eeCCHHHHHHHHHhccc--------CcEEEEech---------------------------hc
Confidence 445799999998743 55556666666554211 133333322 11
Q ss_pred CC---cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 108 RL---FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 108 ~l---fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
-. +|++++|+++|+.++||+...+ ..+|+.-++-|||||+
T Consensus 54 ~~~~~~~~~~fD~V~~~~~l~~~~~~~-------------------------------------~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 54 LLQSAHKESSFDIILSGLVPGSTTLHS-------------------------------------AEILAEIARILRPGGC 96 (176)
T ss_dssp GGGGCCCSSCEEEEEECCSTTCCCCCC-------------------------------------HHHHHHHHHHEEEEEE
T ss_pred CccccCCCCCEeEEEECChhhhcccCH-------------------------------------HHHHHHHHHHCCCCEE
Confidence 12 3789999999999999972211 1356666788999999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEe
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIK 256 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~ 256 (332)
+++.-..... .+ .+.|.++.+|+.+.+++.| | |+
T Consensus 97 l~~~~~~~~~--------~~----------------------------~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 97 LFLKEPVETA--------VD----------------------------NNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp EEEEEEEESS--------SC----------------------------SSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred EEEEcccccc--------cc----------------------------cccccCCHHHHHHHHHHCC-C-cE
Confidence 9995322110 00 0566778999999999999 8 76
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.42 E-value=1.9e-06 Score=76.48 Aligned_cols=52 Identities=13% Similarity=0.294 Sum_probs=37.1
Q ss_pred ccccCCcCCCceeEEEecC-ccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044174 104 SFHHRLFPQSSIHFAHCSY-ALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSG 182 (332)
Q Consensus 104 SFy~~lfP~~svd~~~S~~-alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pG 182 (332)
.+..-.+| +++|+++++. ++||+... .|...+|+.-++-|+||
T Consensus 87 d~~~~~~~-~~fD~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pg 130 (243)
T 3d2l_A 87 DMRELELP-EPVDAITILCDSLNYLQTE-----------------------------------ADVKQTFDSAARLLTDG 130 (243)
T ss_dssp CGGGCCCS-SCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHHEEEE
T ss_pred ChhhcCCC-CCcCEEEEeCCchhhcCCH-----------------------------------HHHHHHHHHHHHhcCCC
Confidence 33333344 7899999987 99996421 24456677777889999
Q ss_pred CeEEEEecc
Q 044174 183 GMMVIIMPG 191 (332)
Q Consensus 183 G~mvl~~~g 191 (332)
|++++.+..
T Consensus 131 G~l~~~~~~ 139 (243)
T 3d2l_A 131 GKLLFDVHS 139 (243)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEcCC
Confidence 999998754
No 80
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.42 E-value=1.1e-06 Score=79.01 Aligned_cols=97 Identities=11% Similarity=0.113 Sum_probs=65.4
Q ss_pred cCCccccC-CcCC---CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 044174 101 VPGSFHHR-LFPQ---SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARA 176 (332)
Q Consensus 101 vpgSFy~~-lfP~---~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra 176 (332)
+.+.+.+. .+|+ +++|+|+|+.++|++.... .|...+|+.-+
T Consensus 140 ~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~----------------------------------~~~~~~l~~~~ 185 (265)
T 2i62_A 140 LKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDL----------------------------------PAYRTALRNLG 185 (265)
T ss_dssp EECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSH----------------------------------HHHHHHHHHHH
T ss_pred EEeeeccCCCCCccccCCccEEEEhhhhhhhcCCh----------------------------------HHHHHHHHHHH
Confidence 34444443 2355 8999999999999754311 24556777777
Q ss_pred HhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEe
Q 044174 177 EEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIK 256 (332)
Q Consensus 177 ~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~ 256 (332)
+-|+|||++++......+ .+ ..| ....+.+..+.+++.+++++.| |++.
T Consensus 186 ~~LkpgG~li~~~~~~~~--~~--------------------~~~--------~~~~~~~~~~~~~~~~~l~~aG-f~~~ 234 (265)
T 2i62_A 186 SLLKPGGFLVMVDALKSS--YY--------------------MIG--------EQKFSSLPLGWETVRDAVEEAG-YTIE 234 (265)
T ss_dssp TTEEEEEEEEEEEESSCC--EE--------------------EET--------TEEEECCCCCHHHHHHHHHHTT-CEEE
T ss_pred hhCCCCcEEEEEecCCCc--eE--------------------EcC--------CccccccccCHHHHHHHHHHCC-CEEE
Confidence 899999999998743211 00 001 1112345668999999999999 9999
Q ss_pred EEEEeC
Q 044174 257 TVELTN 262 (332)
Q Consensus 257 ~le~~~ 262 (332)
.++...
T Consensus 235 ~~~~~~ 240 (265)
T 2i62_A 235 QFEVIS 240 (265)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 988764
No 81
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.41 E-value=1.8e-06 Score=82.42 Aligned_cols=151 Identities=19% Similarity=0.172 Sum_probs=92.3
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~l 109 (332)
..+|+|+|||+|..+..+++. .|...++.-|+| ..-...+.+ .+ +..+.|+|+. -
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~-----------------~p~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d~~~-~ 248 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEI-----------------FPHLKCTVFDQP--QVVGNLTGN---EN--LNFVGGDMFK-S 248 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHH-----------------CTTSEEEEEECH--HHHSSCCCC---SS--EEEEECCTTT-C
T ss_pred CCEEEEECCCcCHHHHHHHHH-----------------CCCCeEEEeccH--HHHhhcccC---CC--cEEEeCccCC-C
Confidence 469999999999988776431 134566666874 333222221 22 5567889988 5
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCeEE
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS---GGMMV 186 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p---GG~mv 186 (332)
+| ++|+++++..||+++. .+...+|+.-.+-|+| ||+++
T Consensus 249 ~~--~~D~v~~~~vlh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~gG~l~ 290 (358)
T 1zg3_A 249 IP--SADAVLLKWVLHDWND------------------------------------EQSLKILKNSKEAISHKGKDGKVI 290 (358)
T ss_dssp CC--CCSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHTGGGGGGCEEE
T ss_pred CC--CceEEEEcccccCCCH------------------------------------HHHHHHHHHHHHhCCCCCCCcEEE
Confidence 67 4999999999997432 1223567777788999 99999
Q ss_pred EEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEe
Q 044174 187 IIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 187 l~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~ 261 (332)
+.-...++... ...+.. ...+.++.--.. . ....++.+|+++++++.| |++.++...
T Consensus 291 i~e~~~~~~~~------~~~~~~-~~~~~d~~~~~~--------~--~g~~~t~~e~~~ll~~aG-f~~~~~~~~ 347 (358)
T 1zg3_A 291 IIDISIDETSD------DRGLTE-LQLDYDLVMLTM--------F--LGKERTKQEWEKLIYDAG-FSSYKITPI 347 (358)
T ss_dssp EEECEECTTCS------CHHHHH-HHHHHHHHHHHH--------H--SCCCEEHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEEeccCCCCc------cchhhh-HHHhhCHHHhcc--------C--CCCCCCHHHHHHHHHHcC-CCeeEEEec
Confidence 87544333211 000000 111122110000 0 013469999999999999 988776643
No 82
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.41 E-value=1.6e-06 Score=84.24 Aligned_cols=146 Identities=10% Similarity=0.165 Sum_probs=88.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC--cccccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL--PQQREYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~~vpgSF 105 (332)
....+|+|+|||+|..+..+.+. + .+|+--|.-.+ .-...+.. +.....|.. +..
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~------------g-------~~v~gvD~s~~-~~~~a~~~~~~~~~~~~~~---~~~ 162 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA------------G-------VRHLGFEPSSG-VAAKAREKGIRVRTDFFEK---ATA 162 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT------------T-------CEEEEECCCHH-HHHHHHTTTCCEECSCCSH---HHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHc------------C-------CcEEEECCCHH-HHHHHHHcCCCcceeeech---hhH
Confidence 44679999999999987766431 1 24555554321 22222221 000011111 111
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
....+|++++|+++|+.++||+.. ...||+.-++-|+|||+|
T Consensus 163 ~~l~~~~~~fD~I~~~~vl~h~~d--------------------------------------~~~~l~~~~r~LkpgG~l 204 (416)
T 4e2x_A 163 DDVRRTEGPANVIYAANTLCHIPY--------------------------------------VQSVLEGVDALLAPDGVF 204 (416)
T ss_dssp HHHHHHHCCEEEEEEESCGGGCTT--------------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred hhcccCCCCEEEEEECChHHhcCC--------------------------------------HHHHHHHHHHHcCCCeEE
Confidence 112356899999999999999742 234677777889999999
Q ss_pred EEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcc-cCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 186 VIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDS-FNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 186 vl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~-fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
++......+ . +. . ...+. +.-.+++.|.++++.++++.| |++..++.+.
T Consensus 205 ~i~~~~~~~--------------~----~~----~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 205 VFEDPYLGD--------------I----VA----K-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp EEEEECHHH--------------H----HH----H-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred EEEeCChHH--------------h----hh----h-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 998654211 1 11 0 11121 123456789999999999999 9999988764
No 83
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.40 E-value=3.9e-06 Score=73.16 Aligned_cols=136 Identities=14% Similarity=0.081 Sum_probs=78.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+ .+ . +++..|.-.. .-...+... .+ +..+-+.+..-
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----------~~---------~--~v~~vD~s~~-~~~~a~~~~--~~--~~~~~~d~~~~ 89 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----------PY---------P--QKVGVEPSEA-MLAVGRRRA--PE--ATWVRAWGEAL 89 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----------CC---------S--EEEEECCCHH-HHHHHHHHC--TT--SEEECCCTTSC
T ss_pred CCCeEEEECCCCCHhHHhC----------CC---------C--eEEEEeCCHH-HHHHHHHhC--CC--cEEEEcccccC
Confidence 4579999999999877654 00 0 3333443211 111111111 01 11233444455
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+|++++|+++++.++||+.. | ..+|+.-.+-|+|||++++.
T Consensus 90 ~~~~~~fD~v~~~~~l~~~~~-~-------------------------------------~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 90 PFPGESFDVVLLFTTLEFVED-V-------------------------------------ERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp CSCSSCEEEEEEESCTTTCSC-H-------------------------------------HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCcEEEEEEcChhhhcCC-H-------------------------------------HHHHHHHHHHcCCCCEEEEE
Confidence 578899999999999999752 1 13555666788999999999
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCC
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNG 251 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G 251 (332)
.....+ .|... +..+...|. .......+.|.+|++++++ |
T Consensus 132 ~~~~~~-----------~~~~~---~~~~~~~~~-------~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 132 VLEALS-----------PWAAL---YRRLGEKGV-------LPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EECTTS-----------HHHHH---HHHHHHTTC-------TTGGGCCCCCHHHHHHHHC--S
T ss_pred ecCCcC-----------cHHHH---HHHHhhccC-------ccccccccCCHHHHHHHhc--C
Confidence 876432 12111 111111221 1111235679999999999 7
No 84
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.39 E-value=2.1e-06 Score=76.73 Aligned_cols=152 Identities=14% Similarity=0.069 Sum_probs=84.5
Q ss_pred CCceEEEeecCCCCcchHHHHHH------------HHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD------------VLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQRE 95 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~------------ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~ 95 (332)
....+|+|+|||+|.++..+.+. .++..+++. ....+.+...|+-.-++..-|.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~~~d~~~~~~~~~~~------- 120 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN-------TAANISYRLLDGLVPEQAAQIH------- 120 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS-------CCTTEEEEECCTTCHHHHHHHH-------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC-------cccCceEEECcccccccccccc-------
Confidence 44578999999999999988743 222222221 1123555555554433222110
Q ss_pred ceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044174 96 YYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNAR 175 (332)
Q Consensus 96 ~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~R 175 (332)
...++|+++++.++||+.. .|...+|+.-
T Consensus 121 ---------------~~~~~d~v~~~~~~~~~~~------------------------------------~~~~~~l~~~ 149 (245)
T 3ggd_A 121 ---------------SEIGDANIYMRTGFHHIPV------------------------------------EKRELLGQSL 149 (245)
T ss_dssp ---------------HHHCSCEEEEESSSTTSCG------------------------------------GGHHHHHHHH
T ss_pred ---------------cccCccEEEEcchhhcCCH------------------------------------HHHHHHHHHH
Confidence 1124899999999999743 1233466666
Q ss_pred HHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccc--hhhhcccCcCcccCCHHHHHHHHHhCCce
Q 044174 176 AEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLIT--EAELDSFNLPIYSASSEEMVKLVDKNGHF 253 (332)
Q Consensus 176 a~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~--~e~~d~fn~P~y~ps~~E~~~~ie~~G~F 253 (332)
.+-|+|||++++.-.+..+ +..+..+.... .|.-. ...+.....|. ..+.+|+++.+ .| |
T Consensus 150 ~~~LkpgG~l~i~~~~~~~---------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--aG-f 211 (245)
T 3ggd_A 150 RILLGKQGAMYLIELGTGC---------IDFFNSLLEKY-----GQLPYELLLVMEHGIRPG-IFTAEDIELYF--PD-F 211 (245)
T ss_dssp HHHHTTTCEEEEEEECTTH---------HHHHHHHHHHH-----SSCCHHHHHHHTTTCCCC-CCCHHHHHHHC--TT-E
T ss_pred HHHcCCCCEEEEEeCCccc---------cHHHHHHHhCC-----CCCchhhhhccccCCCCC-ccCHHHHHHHh--CC-C
Confidence 6788899998887665432 11111111110 01100 00111122343 35899999999 89 9
Q ss_pred EEeEEEEeC
Q 044174 254 SIKTVELTN 262 (332)
Q Consensus 254 ~I~~le~~~ 262 (332)
++..-....
T Consensus 212 ~~~~~~~~~ 220 (245)
T 3ggd_A 212 EILSQGEGL 220 (245)
T ss_dssp EEEEEECCB
T ss_pred EEEeccccc
Confidence 987766543
No 85
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.38 E-value=6e-06 Score=76.33 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=57.2
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|-+++|+++++.+|||++.. +...+|+.=++-|+|||+|++..
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~------------------------------------~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPD------------------------------------VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTT------------------------------------THHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEEechhhhCCcH------------------------------------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 555689999999999998652 12235666667899999999998
Q ss_pred cccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeE
Q 044174 190 PGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKT 257 (332)
Q Consensus 190 ~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~ 257 (332)
...+. + . .++.+...+. ..| .|+++++.+|+++.+ .| |++..
T Consensus 197 ~~~~~--~--~-----~~~~~~~~~~---~~~-----------~~~~~~s~~ei~~~l--~G-~~l~~ 238 (274)
T 2qe6_A 197 LVDTG--L--P-----AQQKLARITR---ENL-----------GEGWARTPEEIERQF--GD-FELVE 238 (274)
T ss_dssp EBCSS--C--H-----HHHHHHHHHH---HHH-----------SCCCCBCHHHHHHTT--TT-CEECT
T ss_pred ecCcc--h--H-----HHHHHHHHHH---hcC-----------CCCccCCHHHHHHHh--CC-CeEcc
Confidence 76532 1 0 0111111111 111 377889999999999 48 87755
No 86
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.38 E-value=3.6e-06 Score=73.62 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=63.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy 106 (332)
....+|+|+|||+|..+..+.+.. .+|+--|.-.. .-...+. +.... -+..+-+++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~~vD~s~~-~~~~a~~~~~~~~--~~~~~~~d~~ 107 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC-------------------KRLTVIDVMPR-AIGRACQRTKRWS--HISWAATDIL 107 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE-------------------EEEEEEESCHH-HHHHHHHHTTTCS--SEEEEECCTT
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC-------------------CEEEEEECCHH-HHHHHHHhcccCC--CeEEEEcchh
Confidence 456899999999999988774320 12233332111 1111111 11110 1122233333
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
.-. |++++|+++++.++||+... .++..+|+.-++-|+|||+++
T Consensus 108 ~~~-~~~~fD~v~~~~~l~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 108 QFS-TAELFDLIVVAEVLYYLEDM-----------------------------------TQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp TCC-CSCCEEEEEEESCGGGSSSH-----------------------------------HHHHHHHHHHHHTEEEEEEEE
T ss_pred hCC-CCCCccEEEEccHHHhCCCH-----------------------------------HHHHHHHHHHHHHcCCCCEEE
Confidence 333 78899999999999997641 134456777778999999999
Q ss_pred EEecc
Q 044174 187 IIMPG 191 (332)
Q Consensus 187 l~~~g 191 (332)
+....
T Consensus 152 ~~~~~ 156 (216)
T 3ofk_A 152 FGSAR 156 (216)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 97754
No 87
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.37 E-value=1.4e-05 Score=70.04 Aligned_cols=107 Identities=12% Similarity=0.153 Sum_probs=61.9
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~l 109 (332)
..+|+|+|||+|..+..+... .+ +++..|.-. +.....+........-+..+.+++....
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~-----------------~~--~v~~vD~s~-~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY-----------------GF--EVVGVDISE-DMIRKAREYAKSRESNVEFIVGDARKLS 98 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT-----------------TC--EEEEEESCH-HHHHHHHHHHHHTTCCCEEEECCTTSCC
T ss_pred CCeEEEEeccCCHHHHHHHHc-----------------CC--EEEEEECCH-HHHHHHHHHHHhcCCCceEEECchhcCC
Confidence 679999999999888766431 01 333344321 1111111110000011222344555545
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+++|+.++|+... .|...+|+.-++-|+|||++++..
T Consensus 99 ~~~~~~D~v~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSIVHFEP------------------------------------LELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp SCTTCEEEEEEESCGGGCCH------------------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcEEEEEEcCchHhCCH------------------------------------HHHHHHHHHHHHHcCCCcEEEEEe
Confidence 67889999999988554211 234456777778899999999987
Q ss_pred ccc
Q 044174 190 PGI 192 (332)
Q Consensus 190 ~gr 192 (332)
...
T Consensus 143 ~~~ 145 (227)
T 1ve3_A 143 TDL 145 (227)
T ss_dssp ECH
T ss_pred cCh
Confidence 653
No 88
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.37 E-value=3.1e-06 Score=77.58 Aligned_cols=139 Identities=13% Similarity=0.192 Sum_probs=81.1
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..++.+... + .+|...|.-..- -...+........-+..+.+++..-
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~------------g-------~~v~~vD~s~~~-~~~a~~~~~~~~~~~~~~~~d~~~~ 179 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL------------G-------YDVTSWDHNENS-IAFLNETKEKENLNISTALYDINAA 179 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT------------T-------CEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHC------------C-------CeEEEEECCHHH-HHHHHHHHHHcCCceEEEEeccccc
Confidence 3579999999999999887532 0 123333332111 1111111000011223344455443
Q ss_pred CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEE
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.+ ++++|+++|+.++||++. .++..+|+.-.+-|+|||++++.
T Consensus 180 ~~-~~~fD~i~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 180 NI-QENYDFIVSTVVFMFLNR------------------------------------ERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp CC-CSCEEEEEECSSGGGSCG------------------------------------GGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cc-cCCccEEEEccchhhCCH------------------------------------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 33 789999999999999743 12334677777889999998887
Q ss_pred ecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 189 MPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 189 ~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
........+ . -..+.+..+.+|+++.++. |++...+
T Consensus 223 ~~~~~~~~~------~--------------------------~~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 223 AAMSTDDVP------C--------------------------PLPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp EEBCCSSSC------C--------------------------SSCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred EecCCCCCC------C--------------------------CCCccccCCHHHHHHHhcC---CEEEEEE
Confidence 654322110 0 0123466778888888754 8877765
No 89
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.36 E-value=3.7e-06 Score=79.99 Aligned_cols=151 Identities=17% Similarity=0.213 Sum_probs=92.5
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+.+ . .|..++..-|+| +.-...+.. .. +..+.|+|+.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~--------~---------~p~~~~~~~D~~--~~~~~a~~~---~~--v~~~~~d~~~ 242 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICE--------T---------FPKLKCIVFDRP--QVVENLSGS---NN--LTYVGGDMFT 242 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHH--------H---------CTTCEEEEEECH--HHHTTCCCB---TT--EEEEECCTTT
T ss_pred ccCceEEEeCCCccHHHHHHHH--------H---------CCCCeEEEeeCH--HHHhhcccC---CC--cEEEeccccC
Confidence 3457999999999988766543 1 234677888874 222222221 12 5567788887
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc---CCe
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS---GGM 184 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p---GG~ 184 (332)
-+|+ +|+++++.+||.++. .+...+|+.-++-|+| ||+
T Consensus 243 -~~p~--~D~v~~~~~lh~~~d------------------------------------~~~~~~l~~~~~~L~p~~~gG~ 283 (352)
T 1fp2_A 243 -SIPN--ADAVLLKYILHNWTD------------------------------------KDCLRILKKCKEAVTNDGKRGK 283 (352)
T ss_dssp -CCCC--CSEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHHHSGGGCCCE
T ss_pred -CCCC--ccEEEeehhhccCCH------------------------------------HHHHHHHHHHHHhCCCCCCCcE
Confidence 5674 999999999995322 1223466667788999 999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEE
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVEL 260 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~ 260 (332)
+++.-...++... ..... . ...+.++.- . . + .-..++.+|+++++++.| |++.++..
T Consensus 284 l~i~e~~~~~~~~-----~~~~~-~-~~~~~d~~~---~-----~-~--~g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 284 VTIIDMVIDKKKD-----ENQVT-Q-IKLLMDVNM---A-----C-L--NGKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp EEEEECEECTTTS-----CHHHH-H-HHHHHHHHG---G-----G-G--TCCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred EEEEEeecCCCCC-----ccchh-h-hHhhccHHH---H-----h-c--cCCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 9988655443211 00000 1 112222210 0 0 1 123468999999999999 98777654
No 90
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.35 E-value=2.8e-05 Score=71.44 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=65.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..++.+.+. + ++..+|+-.|+-.. .-...+......+.-+..+-+.+.+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~--------~--------~~~~~v~gvD~s~~-~~~~a~~~~~~~~~~v~~~~~d~~~ 83 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPL--------L--------PEGSKYTGIDSGET-LLAEARELFRLLPYDSEFLEGDATE 83 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTT--------S--------CTTCEEEEEESCHH-HHHHHHHHHHSSSSEEEEEESCTTT
T ss_pred CCCCeEEEecCCCCHHHHHHHHh--------C--------CCCCEEEEEECCHH-HHHHHHHHHHhcCCceEEEEcchhh
Confidence 45689999999999888765321 0 11256666665321 1111111111111123334455555
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+ ++++|+++++.++|++.. +..+|+.-.+-|+|||++++
T Consensus 84 ~~~-~~~fD~v~~~~~l~~~~~--------------------------------------~~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 84 IEL-NDKYDIAICHAFLLHMTT--------------------------------------PETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp CCC-SSCEEEEEEESCGGGCSS--------------------------------------HHHHHHHHHHTEEEEEEEEE
T ss_pred cCc-CCCeeEEEECChhhcCCC--------------------------------------HHHHHHHHHHHcCCCCEEEE
Confidence 445 469999999999999643 22355666678999999998
Q ss_pred Eecc
Q 044174 188 IMPG 191 (332)
Q Consensus 188 ~~~g 191 (332)
..+.
T Consensus 125 ~~~~ 128 (284)
T 3gu3_A 125 FEPH 128 (284)
T ss_dssp EECC
T ss_pred Eecc
Confidence 8765
No 91
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.34 E-value=8.9e-06 Score=71.87 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=61.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..+..+.+..- +|+..|.-. +.-...+...+ + +..+.+.+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-------------------~v~~~D~s~-~~~~~a~~~~~--~--~~~~~~d~~~ 94 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-------------------DTAGLELSE-DMLTHARKRLP--D--ATLHQGDMRD 94 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-------------------EEEEEESCH-HHHHHHHHHCT--T--CEEEECCTTT
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-------------------cEEEEeCCH-HHHHHHHHhCC--C--CEEEECCHHH
Confidence 3457999999999999987764311 122222211 11111111100 1 1122334433
Q ss_pred CCcCCCceeEEEe-cCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RLFPQSSIHFAHC-SYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~lfP~~svd~~~S-~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
..+ ++++|+++| ..++||+... .|+..+|+.-++-|+|||+++
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~~~~~-----------------------------------~~~~~~l~~~~~~L~pgG~l~ 138 (239)
T 3bxo_A 95 FRL-GRKFSAVVSMFSSVGYLKTT-----------------------------------EELGAAVASFAEHLEPGGVVV 138 (239)
T ss_dssp CCC-SSCEEEEEECTTGGGGCCSH-----------------------------------HHHHHHHHHHHHTEEEEEEEE
T ss_pred ccc-CCCCcEEEEcCchHhhcCCH-----------------------------------HHHHHHHHHHHHhcCCCeEEE
Confidence 333 678999995 4499996431 245567888888999999999
Q ss_pred EEecccC
Q 044174 187 IIMPGIP 193 (332)
Q Consensus 187 l~~~gr~ 193 (332)
+......
T Consensus 139 ~~~~~~~ 145 (239)
T 3bxo_A 139 VEPWWFP 145 (239)
T ss_dssp ECCCCCT
T ss_pred EEeccCc
Confidence 9865443
No 92
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.34 E-value=2.9e-06 Score=81.92 Aligned_cols=110 Identities=14% Similarity=0.069 Sum_probs=66.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcc---------cccceee
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQ---------QREYYSA 99 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~---------~~~~f~~ 99 (332)
+..+|+|+|||+|..++.+.+.. .|..+|+..|+-. +.-...+.... ...--+.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~----------------~~~~~v~gvD~s~-~~l~~a~~~~~~~~~~~~g~~~~~~v~ 145 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV----------------GEHGKVIGVDMLD-NQLEVARKYVEYHAEKFFGSPSRSNVR 145 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH----------------TTTCEEEEEECCH-HHHHHHHHTHHHHHHHHHSSTTCCCEE
T ss_pred CCCEEEEecCccCHHHHHHHHHh----------------CCCCEEEEEECCH-HHHHHHHHHHHHhhhhcccccCCCceE
Confidence 45799999999999988775431 1223455555422 12222221100 0001122
Q ss_pred ecCCccccC------CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHH
Q 044174 100 GVPGSFHHR------LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLN 173 (332)
Q Consensus 100 ~vpgSFy~~------lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~ 173 (332)
.+.+.+..- .+|++++|+|+|+.++||+.. +..+|+
T Consensus 146 ~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------------------------------------~~~~l~ 187 (383)
T 4fsd_A 146 FLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--------------------------------------KLALFK 187 (383)
T ss_dssp EEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------------------------------------HHHHHH
T ss_pred EEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--------------------------------------HHHHHH
Confidence 233444433 688999999999999999643 124566
Q ss_pred HHHHhhccCCeEEEEecccC
Q 044174 174 ARAEEIVSGGMMVIIMPGIP 193 (332)
Q Consensus 174 ~Ra~EL~pGG~mvl~~~gr~ 193 (332)
.-++-|+|||+|++......
T Consensus 188 ~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 188 EIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp HHHHHEEEEEEEEEEEEEES
T ss_pred HHHHHcCCCCEEEEEEeccc
Confidence 66678999999999866544
No 93
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.31 E-value=3.9e-06 Score=72.76 Aligned_cols=155 Identities=10% Similarity=0.058 Sum_probs=83.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+...+|+|+|||+|..++.++.. +..+|+--|.-.. .-...+........-+..+-+++..
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~------------------~~~~v~~vD~s~~-~~~~a~~~~~~~~~~~~~~~~d~~~ 82 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE------------------DGYKTYGIEISDL-QLKKAENFSRENNFKLNISKGDIRK 82 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH------------------TTCEEEEEECCHH-HHHHHHHHHHHHTCCCCEEECCTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHh------------------CCCEEEEEECCHH-HHHHHHHHHHhcCCceEEEECchhh
Confidence 34579999999999987654321 0123444443211 1111111100000011123334444
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+++++.++|+++ + .|...+|+.-++-|+|||++++
T Consensus 83 ~~~~~~~fD~v~~~~~l~~~~--~----------------------------------~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 83 LPFKDESMSFVYSYGTIFHMR--K----------------------------------NDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp CCSCTTCEEEEEECSCGGGSC--H----------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCceeEEEEcChHHhCC--H----------------------------------HHHHHHHHHHHHHcCCCcEEEE
Confidence 457889999999999999863 1 2344567777788999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhc-ccCcCcccCCHHHHHHHHHhCCceEE
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELD-SFNLPIYSASSEEMVKLVDKNGHFSI 255 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d-~fn~P~y~ps~~E~~~~ie~~G~F~I 255 (332)
......+......... .+.... ..+ .......+.+.+|++..+++.| |..
T Consensus 127 ~~~~~~~~~~~~~~~~---------------~~~~~~--~~~~~~~~~~~~~~~~e~~~~~~~~g-~~~ 177 (209)
T 2p8j_A 127 NFLTTKDERYNKGEKI---------------GEGEFL--QLERGEKVIHSYVSLEEADKYFKDMK-VLF 177 (209)
T ss_dssp EEEETTSTTTTCSEEE---------------ETTEEE--ECC-CCCEEEEEECHHHHHHTTTTSE-EEE
T ss_pred EEecccchhccchhhh---------------ccccce--eccCCCceeEEecCHHHHHHHHhhcC-cee
Confidence 9887654321100000 000000 001 1112225778999999999988 443
No 94
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.29 E-value=2.2e-06 Score=79.54 Aligned_cols=48 Identities=10% Similarity=0.238 Sum_probs=37.4
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
++.+++|+|+|...+||+.- .....+...+|+.-++-|+|||+|+++.
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl--------------------------------~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL--------------------------------NWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH--------------------------------HHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCcCEEEEChHHHHhhh--------------------------------cCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 57899999999999999420 1123466678888889999999999974
No 95
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.26 E-value=3.3e-06 Score=74.33 Aligned_cols=166 Identities=13% Similarity=0.095 Sum_probs=85.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcc--cccceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQ--QREYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~~vpgSFy 106 (332)
+..+|+|+|||+|..++.+... .|..+|+-.|.-..=-...-+.... ..+ +..+.++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~-----------------~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~--v~~~~~d~~ 101 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQ-----------------NPDINYIGIDIQKSVLSYALDKVLEVGVPN--IKLLWVDGS 101 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHH-----------------CTTSEEEEEESCHHHHHHHHHHHHHHCCSS--EEEEECCSS
T ss_pred CCCeEEEEccCcCHHHHHHHHH-----------------CCCCCEEEEEcCHHHHHHHHHHHHHcCCCC--EEEEeCCHH
Confidence 3568999999999999877532 1223444444321111111111100 011 111222332
Q ss_pred c--CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 107 H--RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 107 ~--~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
. ..+|++++|+++++...+|..+..... + -+...||+.-++-|+|||.
T Consensus 102 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~-----------~-------------------~~~~~~l~~~~~~LkpgG~ 151 (214)
T 1yzh_A 102 DLTDYFEDGEIDRLYLNFSDPWPKKRHEKR-----------R-------------------LTYKTFLDTFKRILPENGE 151 (214)
T ss_dssp CGGGTSCTTCCSEEEEESCCCCCSGGGGGG-----------S-------------------TTSHHHHHHHHHHSCTTCE
T ss_pred HHHhhcCCCCCCEEEEECCCCccccchhhh-----------c-------------------cCCHHHHHHHHHHcCCCcE
Confidence 2 347888999999998877754211000 0 0123466666678899999
Q ss_pred EEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhh-hcccCcCcccCCHHHHHHHHHhCCceEEeEEE
Q 044174 185 MVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAE-LDSFNLPIYSASSEEMVKLVDKNGHFSIKTVE 259 (332)
Q Consensus 185 mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~-~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le 259 (332)
+++..... +....++..+.+.|.-..+. .|-+..++......+|+....+.| +.|-++.
T Consensus 152 l~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~d~~~~~~~~~~~t~~e~~~~~~g-~~i~~~~ 211 (214)
T 1yzh_A 152 IHFKTDNR---------------GLFEYSLVSFSQYGMKLNGVWLDLHASDFEGNVMTEYEQKFSNKG-QVIYRVE 211 (214)
T ss_dssp EEEEESCH---------------HHHHHHHHHHHHHTCEEEEEESSGGGSCCCCCCCCHHHHHTGGGC-CCCEEEE
T ss_pred EEEEeCCH---------------HHHHHHHHHHHHCCCeeeeccccccccCCCCCCCcHHHHHHHHCC-CCeEEEE
Confidence 99865221 12233444444556422111 122222333334457888888888 6766654
No 96
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.25 E-value=1.4e-05 Score=74.39 Aligned_cols=61 Identities=13% Similarity=0.249 Sum_probs=39.1
Q ss_pred HHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhC
Q 044174 171 FLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKN 250 (332)
Q Consensus 171 fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~ 250 (332)
.|+.-.+-|+|||+|++.....+.. -. -.+.+...++ . ...|+.++|.+|+.+.++
T Consensus 182 ~l~~l~~~L~PGG~Lvls~~~~d~~-------p~-~~~~~~~~~~---~-----------~g~p~~~rs~~ei~~~f~-- 237 (277)
T 3giw_A 182 IVRRLLEPLPSGSYLAMSIGTAEFA-------PQ-EVGRVAREYA---A-----------RNMPMRLRTHAEAEEFFE-- 237 (277)
T ss_dssp HHHHHHTTSCTTCEEEEEEECCTTS-------HH-HHHHHHHHHH---H-----------TTCCCCCCCHHHHHHTTT--
T ss_pred HHHHHHHhCCCCcEEEEEeccCCCC-------HH-HHHHHHHHHH---h-----------cCCCCccCCHHHHHHHhC--
Confidence 4555557899999999998775421 01 1122222221 1 224889999999999995
Q ss_pred CceEEe
Q 044174 251 GHFSIK 256 (332)
Q Consensus 251 G~F~I~ 256 (332)
| |++.
T Consensus 238 G-lelv 242 (277)
T 3giw_A 238 G-LELV 242 (277)
T ss_dssp T-SEEC
T ss_pred C-Cccc
Confidence 8 7753
No 97
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.17 E-value=8.8e-06 Score=73.69 Aligned_cols=156 Identities=14% Similarity=0.235 Sum_probs=86.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+. ..+|+..|.-. +.-...+.... ..+ +-+++..-
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~-------------------~~~v~gvD~s~-~~l~~a~~~~~--~~~---~~~d~~~~ 108 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER-------------------GFEVVLVDPSK-EMLEVAREKGV--KNV---VEAKAEDL 108 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT-------------------TCEEEEEESCH-HHHHHHHHHTC--SCE---EECCTTSC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc-------------------CCeEEEEeCCH-HHHHHHHhhcC--CCE---EECcHHHC
Confidence 4579999999999998776431 02344444321 11111111111 112 33445555
Q ss_pred CcCCCceeEEEecC-ccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 109 LFPQSSIHFAHCSY-ALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 109 lfP~~svd~~~S~~-alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+|++++|+++++. .+||... | ..+|+.-++-|+|||++++
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~~-~-------------------------------------~~~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVEN-K-------------------------------------DKAFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCSC-H-------------------------------------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCEEEEEEcchhhhcccc-H-------------------------------------HHHHHHHHHHcCCCeEEEE
Confidence 57899999999976 5667433 1 2356666678999999999
Q ss_pred EecccCCCCCCCCcchhHHHHHHH----HHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhCCceEEeEEEEeC
Q 044174 188 IMPGIPYGMPYSHLTNGVMYDLMA----TIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKNGHFSIKTVELTN 262 (332)
Q Consensus 188 ~~~gr~~~~~~~~~~~~~~~~~l~----~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~G~F~I~~le~~~ 262 (332)
...+... ...+.+. ..+......|...... ....++.++.+.+|++++ .| |++.+++...
T Consensus 151 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l---aG-f~~~~~~~~~ 214 (260)
T 2avn_A 151 TVDNFYT----------FLQQMIEKDAWDQITRFLKTQTTSVGT-TLFSFNSYAFKPEDLDSL---EG-FETVDIRGIG 214 (260)
T ss_dssp EEEBHHH----------HHHHHHHTTCHHHHHHHHHHCEEEEEC-SSEEEEEECBCGGGGSSC---TT-EEEEEEEEEC
T ss_pred EeCChHH----------HHHHhhcchhHHHHHHHHhccccccCC-CceeEEEeccCHHHHHHh---cC-ceEEEEECCC
Confidence 9876421 0111110 1112223334332100 001112236788998888 89 9998888665
No 98
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.12 E-value=1.2e-05 Score=73.72 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=67.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-C----cccccceeeecCCc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-L----PQQREYYSAGVPGS 104 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l----~~~~~~f~~~vpgS 104 (332)
..+|+|+|||+|..++.+.+. + .+|+-.|+-.. .-...+. . ......-+..+.+.
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~------------~-------~~v~gvD~s~~-~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE------------G-------FSVTSVDASDK-MLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT------------T-------CEEEEEESCHH-HHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHC------------C-------CeEEEEECCHH-HHHHHHHhhhhcccccccceeeEeecC
Confidence 579999999999998877532 0 13444443221 1111111 0 00000011223344
Q ss_pred cccCC---cCCCceeEEEec-CccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 044174 105 FHHRL---FPQSSIHFAHCS-YALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIV 180 (332)
Q Consensus 105 Fy~~l---fP~~svd~~~S~-~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~ 180 (332)
+.... +|++++|+|+|+ .++|++...... ..++..+|+.-++-|+
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~-------------------------------~~~~~~~l~~~~~~Lk 166 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGD-------------------------------QSEHRLALKNIASMVR 166 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSS-------------------------------SHHHHHHHHHHHHTEE
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccC-------------------------------HHHHHHHHHHHHHHcC
Confidence 44433 789999999998 899997653311 1356678888889999
Q ss_pred cCCeEEEEecc
Q 044174 181 SGGMMVIIMPG 191 (332)
Q Consensus 181 pGG~mvl~~~g 191 (332)
|||++++....
T Consensus 167 pgG~l~~~~~~ 177 (293)
T 3thr_A 167 PGGLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEEEC
T ss_pred CCeEEEEEeCC
Confidence 99999998764
No 99
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.11 E-value=6.6e-06 Score=74.40 Aligned_cols=67 Identities=16% Similarity=0.312 Sum_probs=40.8
Q ss_pred HHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHhC
Q 044174 171 FLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDKN 250 (332)
Q Consensus 171 fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~~ 250 (332)
+|+.-++-|+|||++++.+ . + .+ ...+..+-..|.+... ..+..+.+++.+.+++.
T Consensus 119 ~l~~i~rvLkpgG~lv~~~-~-p------------~~---e~~~~~~~~~G~~~d~-------~~~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI-K-P------------QF---EAGREQVGKNGIIRDP-------KVHQMTIEKVLKTATQL 174 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE-C-H------------HH---HSCHHHHC-CCCCCCH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCEEEEEE-C-c------------cc---ccCHHHhCcCCeecCc-------chhHHHHHHHHHHHHHC
Confidence 3455557788999999965 1 1 11 1222222223443211 12334889999999999
Q ss_pred CceEEeEEEEeC
Q 044174 251 GHFSIKTVELTN 262 (332)
Q Consensus 251 G~F~I~~le~~~ 262 (332)
| |++..++...
T Consensus 175 G-f~v~~~~~~p 185 (232)
T 3opn_A 175 G-FSVKGLTFSP 185 (232)
T ss_dssp T-EEEEEEEECS
T ss_pred C-CEEEEEEEcc
Confidence 9 9998887543
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.09 E-value=1.9e-05 Score=69.24 Aligned_cols=154 Identities=11% Similarity=0.077 Sum_probs=83.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc---Cccccc-ceeeecCC
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS---LPQQRE-YYSAGVPG 103 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~---l~~~~~-~f~~~vpg 103 (332)
....+|+|+|||+|..+..+.+. .|..+|+--|+-..=...+.+. ...... --+.-+-+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~-----------------~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~ 88 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQ-----------------NPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWA 88 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHH-----------------CTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEEC
T ss_pred cCCCEEEEecCCCCHHHHHHHHH-----------------CCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEec
Confidence 44689999999999999877542 1345666666544322222211 100000 01233445
Q ss_pred ccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044174 104 SFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGG 183 (332)
Q Consensus 104 SFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG 183 (332)
++.+-.+++++ |.++. .+.|...... ...|...+|+.-++-|||||
T Consensus 89 d~~~l~~~~~~-d~v~~--~~~~~~~~~~-------------------------------~~~~~~~~l~~~~~~LkpgG 134 (218)
T 3mq2_A 89 TAERLPPLSGV-GELHV--LMPWGSLLRG-------------------------------VLGSSPEMLRGMAAVCRPGA 134 (218)
T ss_dssp CSTTCCSCCCE-EEEEE--ESCCHHHHHH-------------------------------HHTSSSHHHHHHHHTEEEEE
T ss_pred chhhCCCCCCC-CEEEE--Eccchhhhhh-------------------------------hhccHHHHHHHHHHHcCCCc
Confidence 56665667777 77763 2223211000 01112346666778899999
Q ss_pred eEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccC--CHHHHHHHHHhCCceEEeEEEEe
Q 044174 184 MMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSA--SSEEMVKLVDKNGHFSIKTVELT 261 (332)
Q Consensus 184 ~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~p--s~~E~~~~ie~~G~F~I~~le~~ 261 (332)
++++.+......... . ++. ..|.+.+ ..++++..+++.| |+|..++.+
T Consensus 135 ~l~~~~~~~~~~~~~-------------------------~--~~~--~~~~~~~~~~~~~l~~~l~~aG-f~i~~~~~~ 184 (218)
T 3mq2_A 135 SFLVALNLHAWRPSV-------------------------P--EVG--EHPEPTPDSADEWLAPRYAEAG-WKLADCRYL 184 (218)
T ss_dssp EEEEEEEGGGBTTBC-------------------------G--GGT--TCCCCCHHHHHHHHHHHHHHTT-EEEEEEEEE
T ss_pred EEEEEeccccccccc-------------------------c--ccc--cCCccchHHHHHHHHHHHHHcC-CCceeeecc
Confidence 999977542211100 0 001 1222111 2456888999999 999999987
Q ss_pred C
Q 044174 262 N 262 (332)
Q Consensus 262 ~ 262 (332)
.
T Consensus 185 ~ 185 (218)
T 3mq2_A 185 E 185 (218)
T ss_dssp C
T ss_pred c
Confidence 5
No 101
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.08 E-value=2.7e-05 Score=67.58 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=16.6
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
...+|+|+|||+|..++.+.
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~ 79 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAH 79 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHH
Confidence 35799999999998887754
No 102
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.08 E-value=1.1e-05 Score=73.40 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=68.8
Q ss_pred HHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc
Q 044174 10 KIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS 89 (332)
Q Consensus 10 ~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~ 89 (332)
.|-.||..-++. ++ .....+|+|+|||+|..|..+.+.+ . |+=.||--|.-. +.....+.
T Consensus 61 klaa~i~~gl~~--l~-ikpG~~VldlG~G~G~~~~~la~~V-G---------------~~G~V~avD~s~-~~~~~l~~ 120 (233)
T 4df3_A 61 KLAAALLKGLIE--LP-VKEGDRILYLGIASGTTASHMSDII-G---------------PRGRIYGVEFAP-RVMRDLLT 120 (233)
T ss_dssp HHHHHHHTTCSC--CC-CCTTCEEEEETCTTSHHHHHHHHHH-C---------------TTCEEEEEECCH-HHHHHHHH
T ss_pred HHHHHHHhchhh--cC-CCCCCEEEEecCcCCHHHHHHHHHh-C---------------CCceEEEEeCCH-HHHHHHHH
Confidence 455666443332 21 3446899999999999998876432 0 111222222211 11111111
Q ss_pred Cc-cccc-ceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHH
Q 044174 90 LP-QQRE-YYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKD 167 (332)
Q Consensus 90 l~-~~~~-~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d 167 (332)
.. ...+ ..+.+..+....-.++.+++|++|+..+.|| |
T Consensus 121 ~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~----------------------------------------~ 160 (233)
T 4df3_A 121 VVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPE----------------------------------------Q 160 (233)
T ss_dssp HSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCTT----------------------------------------H
T ss_pred hhHhhcCeeEEEEeccCccccccccceEEEEEEeccCCh----------------------------------------h
Confidence 11 1111 3455555555555677889999998766665 1
Q ss_pred HHHHHHHHHHhhccCCeEEEEeccc
Q 044174 168 MENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 168 ~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
-..+++.-.+-|||||++++..-.+
T Consensus 161 ~~~~l~~~~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 161 AAIVVRNARFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhccCCCEEEEEEecc
Confidence 1134555556788999999987543
No 103
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.08 E-value=3.5e-06 Score=71.90 Aligned_cols=72 Identities=17% Similarity=0.042 Sum_probs=44.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccCC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~l 109 (332)
.-+|+|+|||+|..++.+.+.. +|+--|. +.-.-.... + +..+-|++.. .
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~--------------------~v~gvD~-----s~~~~~~~~--~--~~~~~~d~~~-~ 73 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN--------------------TVVSTDL-----NIRALESHR--G--GNLVRADLLC-S 73 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS--------------------EEEEEES-----CHHHHHTCS--S--SCEEECSTTT-T
T ss_pred CCeEEEeccCccHHHHHHHhcC--------------------cEEEEEC-----CHHHHhccc--C--CeEEECChhh-h
Confidence 3499999999999998875432 2333332 111111111 1 1223455555 5
Q ss_pred cCCCceeEEEecCccccccCCc
Q 044174 110 FPQSSIHFAHCSYALHWLSKVP 131 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P 131 (332)
+|++++|+++|+..+||.+..+
T Consensus 74 ~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 74 INQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp BCGGGCSEEEECCCCBTTCCCT
T ss_pred cccCCCCEEEECCCCccCCccc
Confidence 6779999999999999987654
No 104
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.03 E-value=2.8e-05 Score=67.08 Aligned_cols=55 Identities=13% Similarity=0.031 Sum_probs=35.5
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+++|+.++||..... .+ . ....+.....|+.=.+-|+|||+|++.+
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~~~---~d-------------------~-----~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGNKI---DD-------------------H-----LNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSCHH---HH-------------------H-----HHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcccEEEeCCCcCCCCCcc---cC-------------------H-----HHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 6888999999999999942200 00 0 0111223345666667889999999976
Q ss_pred cc
Q 044174 190 PG 191 (332)
Q Consensus 190 ~g 191 (332)
..
T Consensus 155 ~~ 156 (201)
T 2plw_A 155 YL 156 (201)
T ss_dssp EC
T ss_pred eC
Confidence 54
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.02 E-value=7.9e-05 Score=62.60 Aligned_cols=101 Identities=14% Similarity=0.124 Sum_probs=58.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc--c-cceeeecCCc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ--R-EYYSAGVPGS 104 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~--~-~~f~~~vpgS 104 (332)
....+|+|+|||+|..++.+... .|..+|+..|.-..-....=+.+... . ++++. +.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~-----------------~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---~d 83 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRS-----------------TPQTTAVCFEISEERRERILSNAINLGVSDRIAVQ---QG 83 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTT-----------------SSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEE---CC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHH-----------------CCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEe---cc
Confidence 44579999999999988776431 12355555555332111111111110 0 22211 33
Q ss_pred cccCCcCC--CceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044174 105 FHHRLFPQ--SSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSG 182 (332)
Q Consensus 105 Fy~~lfP~--~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pG 182 (332)
... .+|. +++|+++++.++|| + .+|+.-.+-|+||
T Consensus 84 ~~~-~~~~~~~~~D~i~~~~~~~~----~--------------------------------------~~l~~~~~~L~~g 120 (178)
T 3hm2_A 84 APR-AFDDVPDNPDVIFIGGGLTA----P--------------------------------------GVFAAAWKRLPVG 120 (178)
T ss_dssp TTG-GGGGCCSCCSEEEECC-TTC----T--------------------------------------THHHHHHHTCCTT
T ss_pred hHh-hhhccCCCCCEEEECCcccH----H--------------------------------------HHHHHHHHhcCCC
Confidence 322 3444 89999999999988 1 1344455788999
Q ss_pred CeEEEEecc
Q 044174 183 GMMVIIMPG 191 (332)
Q Consensus 183 G~mvl~~~g 191 (332)
|++++....
T Consensus 121 G~l~~~~~~ 129 (178)
T 3hm2_A 121 GRLVANAVT 129 (178)
T ss_dssp CEEEEEECS
T ss_pred CEEEEEeec
Confidence 999988754
No 106
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.01 E-value=2.9e-05 Score=71.69 Aligned_cols=22 Identities=14% Similarity=0.025 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..|+.+++
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~ 65 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALE 65 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHH
T ss_pred CCcCEEEEEeCcchHHHHHHHh
Confidence 4457999999999999988763
No 107
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.98 E-value=8.1e-05 Score=64.28 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=69.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
+...+|+|+|||+|..++.+... + +. +|+-.|.-..-....-+......+ +..+.+++..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~------------~-----~~-~v~~~D~s~~~~~~a~~~~~~~~~--i~~~~~d~~~ 100 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG------------G-----FP-NVTSVDYSSVVVAAMQACYAHVPQ--LRWETMDVRK 100 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT------------T-----CC-CEEEEESCHHHHHHHHHHTTTCTT--CEEEECCTTS
T ss_pred CCCCeEEEECCCCcHHHHHHHHc------------C-----CC-cEEEEeCCHHHHHHHHHhcccCCC--cEEEEcchhc
Confidence 34579999999999999876532 0 01 233333321111111111111011 1122334444
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+|+++.++|.+..... ..|... .....+...+|+.-.+-|+|||++++
T Consensus 101 ~~~~~~~fD~v~~~~~~~~~~~~~~-------~~~~~~----------------~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 101 LDFPSASFDVVLEKGTLDALLAGER-------DPWTVS----------------SEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp CCSCSSCEEEEEEESHHHHHTTTCS-------CTTSCC----------------HHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCcccEEEECcchhhhccccc-------cccccc----------------cchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 4578899999999999987643211 111111 12345667788888889999999999
Q ss_pred Eeccc
Q 044174 188 IMPGI 192 (332)
Q Consensus 188 ~~~gr 192 (332)
...+.
T Consensus 158 ~~~~~ 162 (215)
T 2pxx_A 158 MTSAA 162 (215)
T ss_dssp EESCC
T ss_pred EeCCC
Confidence 98764
No 108
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.97 E-value=5.6e-05 Score=73.33 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=65.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHh-cCcccccceeeecCCcccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFT-SLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~-~l~~~~~~f~~~vpgSFy~ 107 (332)
...+|+|+|||+|..++.+... ..+|+..|.-.. .-...+ ++... ..-+..+-+++..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~-------------------g~~V~gvDis~~-al~~A~~n~~~~-~~~v~~~~~D~~~ 291 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM-------------------GAEVVGVEDDLA-SVLSLQKGLEAN-ALKAQALHSDVDE 291 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT-------------------TCEEEEEESBHH-HHHHHHHHHHHT-TCCCEEEECSTTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc-------------------CCEEEEEECCHH-HHHHHHHHHHHc-CCCeEEEEcchhh
Confidence 4579999999999999887642 013333332110 000111 01100 0112234455566
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
.+.+++++|+|+|+..+||...... .+...|++.-.+-|+|||++++
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~---------------------------------~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVIL---------------------------------DVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCC---------------------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCCCeEEEEECCchhhcccccH---------------------------------HHHHHHHHHHHHhcCcCcEEEE
Confidence 5666789999999999998443221 2445677777788999999999
Q ss_pred Eec
Q 044174 188 IMP 190 (332)
Q Consensus 188 ~~~ 190 (332)
+..
T Consensus 339 v~n 341 (381)
T 3dmg_A 339 VSN 341 (381)
T ss_dssp EEC
T ss_pred EEc
Confidence 863
No 109
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.96 E-value=3.2e-05 Score=68.39 Aligned_cols=21 Identities=10% Similarity=0.049 Sum_probs=17.7
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|+|||+|..++.+..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~ 58 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAK 58 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHH
Confidence 356899999999999988754
No 110
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.96 E-value=1.5e-05 Score=76.16 Aligned_cols=103 Identities=12% Similarity=0.113 Sum_probs=68.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFHH 107 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy~ 107 (332)
..+|+|+|||+|..++.+++. +.-+|+--|.. . .-...+...... .--+.-+-|++.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~------------------g~~~v~gvD~s-~-~l~~a~~~~~~~~~~~~v~~~~~d~~~ 126 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA------------------GARKVIGIECS-S-ISDYAVKIVKANKLDHVVTIIKGKVEE 126 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT------------------TCSEEEEEECS-T-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCEEEEEeccchHHHHHHHHC------------------CCCEEEEECcH-H-HHHHHHHHHHHcCCCCcEEEEECcHHH
Confidence 478999999999988776532 12356677765 2 444444322111 1123445566666
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVI 187 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl 187 (332)
-.+|++++|+++|....|++...+ ++..+|+.+.+-|+|||+|+.
T Consensus 127 ~~~~~~~fD~Iis~~~~~~l~~~~-----------------------------------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 127 VELPVEKVDIIISEWMGYCLFYES-----------------------------------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCCSSSCEEEEEECCCBBTBTBTC-----------------------------------CHHHHHHHHHHHEEEEEEEES
T ss_pred ccCCCCceEEEEEccccccccCch-----------------------------------hHHHHHHHHHHhCCCCCEEcc
Confidence 678899999999987666543321 344678889999999999973
No 111
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.94 E-value=7.2e-05 Score=66.78 Aligned_cols=107 Identities=16% Similarity=0.319 Sum_probs=59.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
++..+|+|+|||+|..++.+++. + .+|+..|+-. +.-...+........-+..+.+.+..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~------------~-------~~v~gvD~s~-~~l~~a~~~~~~~~~~v~~~~~d~~~ 99 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER------------G-------YEVVGLDLHE-EMLRVARRKAKERNLKIEFLQGDVLE 99 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT------------T-------CEEEEEESCH-HHHHHHHHHHHHTTCCCEEEESCGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC------------C-------CeEEEEECCH-HHHHHHHHHHHhcCCceEEEECChhh
Confidence 34579999999999998877531 0 1233333211 11111111100000112223344444
Q ss_pred CCcCCCceeEEEecC-ccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RLFPQSSIHFAHCSY-ALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~lfP~~svd~~~S~~-alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
-.+| +++|++++.. ++|+++. .|...+|+.-++-|+|||+++
T Consensus 100 ~~~~-~~fD~v~~~~~~~~~~~~------------------------------------~~~~~~l~~~~~~L~pgG~li 142 (252)
T 1wzn_A 100 IAFK-NEFDAVTMFFSTIMYFDE------------------------------------EDLRKLFSKVAEALKPGGVFI 142 (252)
T ss_dssp CCCC-SCEEEEEECSSGGGGSCH------------------------------------HHHHHHHHHHHHHEEEEEEEE
T ss_pred cccC-CCccEEEEcCCchhcCCH------------------------------------HHHHHHHHHHHHHcCCCeEEE
Confidence 3333 6899999864 4444311 245567777778899999999
Q ss_pred EEecc
Q 044174 187 IIMPG 191 (332)
Q Consensus 187 l~~~g 191 (332)
+.+..
T Consensus 143 ~~~~~ 147 (252)
T 1wzn_A 143 TDFPC 147 (252)
T ss_dssp EEEEC
T ss_pred Eeccc
Confidence 98764
No 112
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.91 E-value=4.7e-05 Score=65.41 Aligned_cols=47 Identities=15% Similarity=0.074 Sum_probs=33.7
Q ss_pred CCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCeEEEE
Q 044174 111 PQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAE--EIVSGGMMVII 188 (332)
Q Consensus 111 P~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~--EL~pGG~mvl~ 188 (332)
+++++|+++++..+||.. .++..+|+.-.+ -|+|||++++.
T Consensus 110 ~~~~fD~i~~~~p~~~~~-------------------------------------~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNVDS-------------------------------------ADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp CSSCCSEEEECCCTTSCH-------------------------------------HHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred cCCCccEEEECCCCCcch-------------------------------------hhHHHHHHHHHhcCccCCCeEEEEE
Confidence 568999999987777621 234445555555 89999999999
Q ss_pred ecccCC
Q 044174 189 MPGIPY 194 (332)
Q Consensus 189 ~~gr~~ 194 (332)
...+..
T Consensus 153 ~~~~~~ 158 (189)
T 3p9n_A 153 RATTCA 158 (189)
T ss_dssp EETTSC
T ss_pred ecCCCC
Confidence 876543
No 113
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.89 E-value=2.9e-05 Score=64.40 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=65.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..+..+.+.. + +..+++..|... .. .++ + +..+.+.+..
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~-----------~-----~~~~v~~~D~~~--~~----~~~---~--~~~~~~d~~~ 73 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQI-----------G-----GKGRIIACDLLP--MD----PIV---G--VDFLQGDFRD 73 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHH-----------C-----TTCEEEEEESSC--CC----CCT---T--EEEEESCTTS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHh-----------C-----CCCeEEEEECcc--cc----ccC---c--EEEEEccccc
Confidence 334699999999999888765432 0 123444444432 10 111 1 1112333333
Q ss_pred CC--------cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044174 108 RL--------FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEI 179 (332)
Q Consensus 108 ~l--------fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL 179 (332)
-. +|++++|+++++..+||........ .........+|+.-.+-|
T Consensus 74 ~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~l~~~~~~L 126 (180)
T 1ej0_A 74 ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDI---------------------------PRAMYLVELALEMCRDVL 126 (180)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHH---------------------------HHHHHHHHHHHHHHHHHE
T ss_pred chhhhhhhccCCCCceeEEEECCCccccCCCccch---------------------------HHHHHHHHHHHHHHHHHc
Confidence 22 6788999999999999965421100 011122356677777889
Q ss_pred ccCCeEEEEeccc
Q 044174 180 VSGGMMVIIMPGI 192 (332)
Q Consensus 180 ~pGG~mvl~~~gr 192 (332)
+|||++++.....
T Consensus 127 ~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 127 APGGSFVVKVFQG 139 (180)
T ss_dssp EEEEEEEEEEESS
T ss_pred CCCcEEEEEEecC
Confidence 9999999987653
No 114
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.89 E-value=0.00012 Score=64.40 Aligned_cols=63 Identities=11% Similarity=0.100 Sum_probs=33.6
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
+|++++|+++++-..||...... .. ....+..|. ....+...+|+.-.+-|+|||++++.+
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~~--~~-~~~~~~~~~----------------~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGRV--LT-EREAIGGGK----------------YGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp TCCSCEEEEEECCCCC------------------CCS----------------SSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCccccc--cC-hhhhhccCc----------------cchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 45689999999988888655211 00 000010100 011233567777778899999999986
Q ss_pred cc
Q 044174 190 PG 191 (332)
Q Consensus 190 ~g 191 (332)
..
T Consensus 180 ~~ 181 (230)
T 3evz_A 180 PD 181 (230)
T ss_dssp ES
T ss_pred cc
Confidence 43
No 115
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.88 E-value=0.0001 Score=62.70 Aligned_cols=21 Identities=14% Similarity=0.064 Sum_probs=18.1
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
++.-+|+|+|||+|..|+.+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la 41 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLA 41 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHH
Confidence 345799999999999999886
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.87 E-value=7.7e-05 Score=64.82 Aligned_cols=81 Identities=11% Similarity=-0.003 Sum_probs=43.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy 106 (332)
.+..+|+|+|||+|..+..+.... .+|+-.|.-. +.-...+. +....---+..+-+...
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~-------------------~~v~~vD~~~-~~~~~a~~~~~~~~~~~v~~~~~d~~ 135 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV-------------------QHVCSVERIK-GLQWQARRRLKNLDLHNVSTRHGDGW 135 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS-------------------SEEEEEESCH-HHHHHHHHHHHHTTCCSEEEEESCGG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-------------------CEEEEEecCH-HHHHHHHHHHHHcCCCceEEEECCcc
Confidence 445799999999999998876430 0112222110 11111111 00000001223344555
Q ss_pred cCCcCCCceeEEEecCcccccc
Q 044174 107 HRLFPQSSIHFAHCSYALHWLS 128 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs 128 (332)
..+.+.+++|+++++.++||+.
T Consensus 136 ~~~~~~~~~D~i~~~~~~~~~~ 157 (210)
T 3lbf_A 136 QGWQARAPFDAIIVTAAPPEIP 157 (210)
T ss_dssp GCCGGGCCEEEEEESSBCSSCC
T ss_pred cCCccCCCccEEEEccchhhhh
Confidence 5555678999999999998854
No 117
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.84 E-value=3.6e-05 Score=74.23 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=69.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSF 105 (332)
.+..+|+|+|||+|..++.+++. + .-+|+.-|.. +.....+...... .--+.-+-|+.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~------------g------~~~V~gvD~s--~~~~~a~~~~~~~~~~~~v~~~~~d~ 121 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA------------G------ARKVYAVEAT--KMADHARALVKANNLDHIVEVIEGSV 121 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT------------T------CSEEEEEESS--TTHHHHHHHHHHTTCTTTEEEEESCG
T ss_pred CCCCEEEEeccCcCHHHHHHHhc------------C------CCEEEEEccH--HHHHHHHHHHHHcCCCCeEEEEECch
Confidence 44579999999999988776431 1 1267777764 4444444432211 11134455666
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.+-.+| +++|+++|....|++...+ ++..+|+.+.+-|+|||+|
T Consensus 122 ~~~~~~-~~~D~Iv~~~~~~~l~~e~-----------------------------------~~~~~l~~~~~~LkpgG~l 165 (376)
T 3r0q_C 122 EDISLP-EKVDVIISEWMGYFLLRES-----------------------------------MFDSVISARDRWLKPTGVM 165 (376)
T ss_dssp GGCCCS-SCEEEEEECCCBTTBTTTC-----------------------------------THHHHHHHHHHHEEEEEEE
T ss_pred hhcCcC-CcceEEEEcChhhcccchH-----------------------------------HHHHHHHHHHhhCCCCeEE
Confidence 665666 8999999977777765321 3456888889999999999
Q ss_pred EEEe
Q 044174 186 VIIM 189 (332)
Q Consensus 186 vl~~ 189 (332)
++.-
T Consensus 166 i~~~ 169 (376)
T 3r0q_C 166 YPSH 169 (376)
T ss_dssp ESSE
T ss_pred EEec
Confidence 7653
No 118
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.84 E-value=9.5e-05 Score=64.13 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=18.3
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..++.+..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~ 60 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASN 60 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHH
Confidence 3457999999999999988754
No 119
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.84 E-value=5.8e-05 Score=67.24 Aligned_cols=108 Identities=8% Similarity=0.071 Sum_probs=60.5
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+... .+ -+|+.-|.-. +.-...+........-+.-+-|++.+.
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~-----------------~~-~~v~gvD~s~-~~l~~a~~~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEA-----------------PI-DEHWIIECND-GVFQRLRDWAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTS-----------------CE-EEEEEEECCH-HHHHHHHHHGGGCSSEEEEEESCHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHhc-----------------CC-CeEEEEcCCH-HHHHHHHHHHHhcCCCeEEEecCHHHh
Confidence 4579999999999988776320 01 1344444322 122222221111111233344555544
Q ss_pred --CcCCCceeEEEe-cCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 109 --LFPQSSIHFAHC-SYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 109 --lfP~~svd~~~S-~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
-+|++++|+|++ .+++++ .... ..++..+|+.-++-|||||+|
T Consensus 121 ~~~~~~~~fD~V~~d~~~~~~-~~~~---------------------------------~~~~~~~l~~~~r~LkpgG~l 166 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYPLSE-ETWH---------------------------------THQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBG-GGTT---------------------------------THHHHHHHHTHHHHEEEEEEE
T ss_pred hcccCCCceEEEEECCcccch-hhhh---------------------------------hhhHHHHHHHHHHhcCCCeEE
Confidence 578899999999 666532 1100 123445677777889999999
Q ss_pred EEEe
Q 044174 186 VIIM 189 (332)
Q Consensus 186 vl~~ 189 (332)
++.-
T Consensus 167 ~~~~ 170 (236)
T 1zx0_A 167 TYCN 170 (236)
T ss_dssp EECC
T ss_pred EEEe
Confidence 8764
No 120
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.81 E-value=0.00017 Score=60.91 Aligned_cols=46 Identities=4% Similarity=0.037 Sum_probs=35.2
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
++++++|+++++..+||- ..++..+|+.-.+-|+|||++++..
T Consensus 115 ~~~~~~D~v~~~~~~~~~-------------------------------------~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 115 VKDRKYNKIITNPPIRAG-------------------------------------KEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp CTTSCEEEEEECCCSTTC-------------------------------------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCceEEEECCCcccc-------------------------------------hhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 457789999998888871 1244567777778899999999998
Q ss_pred ccc
Q 044174 190 PGI 192 (332)
Q Consensus 190 ~gr 192 (332)
...
T Consensus 158 ~~~ 160 (194)
T 1dus_A 158 QTK 160 (194)
T ss_dssp EST
T ss_pred CCC
Confidence 664
No 121
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.80 E-value=0.00015 Score=64.80 Aligned_cols=68 Identities=16% Similarity=0.136 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHH
Q 044174 169 ENFLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVD 248 (332)
Q Consensus 169 ~~fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie 248 (332)
..+|+.-++-|||||++++....... ++.+...+. +. . ...|.|++. +|+++.++
T Consensus 119 ~~~l~~~~r~LkpGG~l~i~~~~~~~------------~~~~~~~~~-----~~------~-~~~~~~~~~-~el~~~l~ 173 (225)
T 3p2e_A 119 RDILSNVADLAKKEAHFEFVTTYSDS------------YEEAEIKKR-----GL------P-LLSKAYFLS-EQYKAELS 173 (225)
T ss_dssp HHHHHHHHTTEEEEEEEEEEECCCC--------------------------------------CCHHHHHS-HHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccc------------chhchhhhc-----CC------C-CCChhhcch-HHHHHHHH
Confidence 34677777889999999995432111 011110011 10 0 112444443 47999999
Q ss_pred hCCceEEeEEEEeC
Q 044174 249 KNGHFSIKTVELTN 262 (332)
Q Consensus 249 ~~G~F~I~~le~~~ 262 (332)
+.| |+|..++.+.
T Consensus 174 ~aG-f~v~~~~~~~ 186 (225)
T 3p2e_A 174 NSG-FRIDDVKELD 186 (225)
T ss_dssp HHT-CEEEEEEEEC
T ss_pred HcC-CCeeeeeecC
Confidence 999 9999999886
No 122
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.79 E-value=0.00011 Score=72.31 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=18.4
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...-+|+|+|||+|..++.++.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~ 193 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAA 193 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHH
Confidence 4457899999999999988763
No 123
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.75 E-value=0.00019 Score=64.70 Aligned_cols=21 Identities=24% Similarity=0.556 Sum_probs=17.6
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
.+..+|+|+|||+|..++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la 65 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELS 65 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHG
T ss_pred CCCCeEEEEccCCcHHHHHHH
Confidence 456899999999999998875
No 124
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.74 E-value=2.4e-05 Score=69.75 Aligned_cols=112 Identities=15% Similarity=0.229 Sum_probs=62.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcc--cccceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQ--QREYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~--~~~~f~~~vpgSFy 106 (332)
...+|+|+|||+|..++.+... .|...|+--|.-.+=-...-+.... ..+ +.-+-++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~-----------------~p~~~v~giD~s~~~l~~a~~~~~~~~l~n--v~~~~~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKD-----------------RPEQDFLGIEVHSPGVGACLASAHEEGLSN--LRVMCHDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHH-----------------CTTSEEEEECSCHHHHHHHHHHHHHTTCSS--EEEECSCHH
T ss_pred CCCeEEEEeeeChHHHHHHHHH-----------------CCCCeEEEEEecHHHHHHHHHHHHHhCCCc--EEEEECCHH
Confidence 4579999999999999887532 1233344444322111111111100 001 112233322
Q ss_pred ---cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044174 107 ---HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGG 183 (332)
Q Consensus 107 ---~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG 183 (332)
...+|++++|.+++++...|-..... +.++. . ..||+.-++-|+|||
T Consensus 95 ~~l~~~~~~~~~d~v~~~~~~p~~~~~~~-----------~rr~~----~---------------~~~l~~~~r~LkpGG 144 (218)
T 3dxy_A 95 EVLHKMIPDNSLRMVQLFFPDPWHKARHN-----------KRRIV----Q---------------VPFAELVKSKLQLGG 144 (218)
T ss_dssp HHHHHHSCTTCEEEEEEESCCCCCSGGGG-----------GGSSC----S---------------HHHHHHHHHHEEEEE
T ss_pred HHHHHHcCCCChheEEEeCCCCccchhhh-----------hhhhh----h---------------HHHHHHHHHHcCCCc
Confidence 23478999999999999888433110 11110 0 136677778899999
Q ss_pred eEEEEe
Q 044174 184 MMVIIM 189 (332)
Q Consensus 184 ~mvl~~ 189 (332)
++++..
T Consensus 145 ~l~i~t 150 (218)
T 3dxy_A 145 VFHMAT 150 (218)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999876
No 125
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.70 E-value=0.00016 Score=65.74 Aligned_cols=19 Identities=32% Similarity=0.293 Sum_probs=15.9
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
..+|+|+|||+|..++.+.
T Consensus 121 ~~~VLDiGcG~G~l~~~la 139 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAE 139 (254)
T ss_dssp TCEEEEETCTTSHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHH
Confidence 4699999999999887653
No 126
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.68 E-value=0.00015 Score=68.86 Aligned_cols=103 Identities=15% Similarity=0.181 Sum_probs=62.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy 106 (332)
+.-+|+|+|||+|..++.+++. ...+|+--|.. +.-...+...... .--+..+-|.+.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~------------------g~~~v~gvD~s--~~~~~a~~~~~~~~~~~~i~~~~~d~~ 123 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA------------------GAKKVLGVDQS--EILYQAMDIIRLNKLEDTITLIKGKIE 123 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------TCSEEEEEESS--THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCCEEEEeeccCcHHHHHHHHc------------------CCCEEEEEChH--HHHHHHHHHHHHcCCCCcEEEEEeeHH
Confidence 3469999999999988765431 11356666764 2333333221110 011233455555
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
+..+|++++|+++|....+-+.. ..++..+|+.+.+-|+|||+++
T Consensus 124 ~~~~~~~~~D~Ivs~~~~~~l~~-----------------------------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 124 EVHLPVEKVDVIISEWMGYFLLF-----------------------------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TSCCSCSCEEEEEECCCBTTBTT-----------------------------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred HhcCCCCcEEEEEEcCchhhccC-----------------------------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 65678899999999652111110 1245568888999999999998
No 127
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.65 E-value=0.00014 Score=66.48 Aligned_cols=124 Identities=13% Similarity=0.142 Sum_probs=67.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccccceeeecCCccccC
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~~~f~~~vpgSFy~~ 108 (332)
..+|+|+|||+|..++.+... .|..+|+..|.-. +.-.+.+.. ....---+..+-+++..
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~-----------------~~~~~v~~vD~s~-~~l~~a~~n~~~~~~~~v~~~~~d~~~- 170 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASE-----------------RPDCEIIAVDRMP-DAVSLAQRNAQHLAIKNIHILQSDWFS- 170 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHH-----------------CTTSEEEEECSSH-HHHHHHHHHHHHHTCCSEEEECCSTTG-
T ss_pred CCEEEEecCCccHHHHHHHHh-----------------CCCCEEEEEECCH-HHHHHHHHHHHHcCCCceEEEEcchhh-
Confidence 469999999999999877532 0123444444321 111111110 00000012233444444
Q ss_pred CcCCCceeEEEecCccccccCCcc---ccccC-CCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 109 LFPQSSIHFAHCSYALHWLSKVPE---ELLDE-NSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~~P~---~~~~~-~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
.+|++++|+++|+...+|... +. .+... ...++..| .....++..+++.=.+-|+|||+
T Consensus 171 ~~~~~~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~----------------~~g~~~~~~~l~~~~~~LkpgG~ 233 (276)
T 2b3t_A 171 ALAGQQFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAA----------------DSGMADIVHIIEQSRNALVSGGF 233 (276)
T ss_dssp GGTTCCEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCH----------------HHHTHHHHHHHHHHGGGEEEEEE
T ss_pred hcccCCccEEEECCCCCCccc-cccChhhhhcCcHHHHcCC----------------CcHHHHHHHHHHHHHHhcCCCCE
Confidence 345778999999988887654 21 11110 00011111 23345667788888889999999
Q ss_pred EEEEe
Q 044174 185 MVIIM 189 (332)
Q Consensus 185 mvl~~ 189 (332)
++++.
T Consensus 234 l~~~~ 238 (276)
T 2b3t_A 234 LLLEH 238 (276)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99985
No 128
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.62 E-value=0.00033 Score=61.95 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|+|||+|..+..+.+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~ 68 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGP 68 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGG
T ss_pred CCCeEEEeCCCCCHHHHHHHH
Confidence 357999999999998877653
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.61 E-value=3.6e-05 Score=66.38 Aligned_cols=128 Identities=9% Similarity=0.039 Sum_probs=60.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
.+..+|+|+|||+|..++.+.... +..+++..|.-..= -...+........-+..+-+++..
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~~~~~-~~~a~~~~~~~~~~~~~~~~d~~~ 90 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-----------------PGVSVTAVDLSMDA-LAVARRNAERFGAVVDWAAADGIE 90 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-----------------TTEEEEEEECC--------------------CCHHHHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-----------------CCCeEEEEECCHHH-HHHHHHHHHHhCCceEEEEcchHh
Confidence 456899999999999888775431 23445555542211 111111100000122234444444
Q ss_pred CCcCC-----CceeEEEecCccccccCCc---cccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044174 108 RLFPQ-----SSIHFAHCSYALHWLSKVP---EELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEI 179 (332)
Q Consensus 108 ~lfP~-----~svd~~~S~~alHWLs~~P---~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL 179 (332)
.+++ +++|+++++-.+|+..... ..+.... + .....+ .......+..||+.-.+-|
T Consensus 91 -~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~-~-----~~~~~~---------~~~~~~~~~~~l~~~~~~L 154 (215)
T 4dzr_A 91 -WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYE-P-----RLALDG---------GEDGLQFYRRMAALPPYVL 154 (215)
T ss_dssp -HHHHHHHTTCCBSEEEECCCCCC---------------------------------------CTTHHHHHHHTCCGGGB
T ss_pred -hhhhhhhccCcccEEEECCCCCCCccccccChhhhccC-c-----cccccC---------CCcHHHHHHHHHHHHHHHh
Confidence 4555 8999999987776644321 1111000 0 000000 0112234467888888899
Q ss_pred ccCCe-EEEEe
Q 044174 180 VSGGM-MVIIM 189 (332)
Q Consensus 180 ~pGG~-mvl~~ 189 (332)
+|||+ +++.+
T Consensus 155 kpgG~l~~~~~ 165 (215)
T 4dzr_A 155 ARGRAGVFLEV 165 (215)
T ss_dssp CSSSEEEEEEC
T ss_pred cCCCeEEEEEE
Confidence 99999 55544
No 130
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.60 E-value=6.4e-05 Score=72.71 Aligned_cols=108 Identities=12% Similarity=0.126 Sum_probs=60.0
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Cccc---ccceeeecCCcc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQ---REYYSAGVPGSF 105 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~---~~~f~~~vpgSF 105 (332)
..+|+|+|||+|..++.++.. .|..+|+..|.-. ......+. +... ...-+..+-+++
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~-----------------~p~~~V~gvD~s~-~al~~Ar~n~~~ngl~~~~~v~~~~~D~ 284 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDK-----------------NPQAKVVFVDESP-MAVASSRLNVETNMPEALDRCEFMINNA 284 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHH-----------------CTTCEEEEEESCH-HHHHHHHHHHHHHCGGGGGGEEEEECST
T ss_pred CCeEEEEeCcchHHHHHHHHH-----------------CCCCEEEEEECcH-HHHHHHHHHHHHcCCCcCceEEEEechh
Confidence 379999999999999887542 1234455555421 11111111 1100 011123344555
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
+. .+|++++|+|+|+-.+|+...++... ...+|+.-.+-|+|||++
T Consensus 285 ~~-~~~~~~fD~Ii~nppfh~~~~~~~~~---------------------------------~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 285 LS-GVEPFRFNAVLCNPPFHQQHALTDNV---------------------------------AWEMFHHARRCLKINGEL 330 (375)
T ss_dssp TT-TCCTTCEEEEEECCCC-------CCH---------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred hc-cCCCCCeeEEEECCCcccCcccCHHH---------------------------------HHHHHHHHHHhCCCCcEE
Confidence 55 46888999999999999854433211 113566666778999999
Q ss_pred EEEe
Q 044174 186 VIIM 189 (332)
Q Consensus 186 vl~~ 189 (332)
+++.
T Consensus 331 ~iv~ 334 (375)
T 4dcm_A 331 YIVA 334 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 131
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.60 E-value=0.00019 Score=67.33 Aligned_cols=158 Identities=20% Similarity=0.194 Sum_probs=84.4
Q ss_pred HHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc
Q 044174 10 KIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS 89 (332)
Q Consensus 10 ~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~ 89 (332)
.|++++...- . .....+|+|+|||+|..|..+++. ..-+|+--|+-.+=-..-.+.
T Consensus 72 Kl~~~l~~~~-~-----~~~g~~vLDiGcGTG~~t~~L~~~------------------ga~~V~aVDvs~~mL~~a~r~ 127 (291)
T 3hp7_A 72 KLEKALAVFN-L-----SVEDMITIDIGASTGGFTDVMLQN------------------GAKLVYAVDVGTNQLVWKLRQ 127 (291)
T ss_dssp HHHHHHHHTT-C-----CCTTCEEEEETCTTSHHHHHHHHT------------------TCSEEEEECSSSSCSCHHHHT
T ss_pred HHHHHHHhcC-C-----CccccEEEecCCCccHHHHHHHhC------------------CCCEEEEEECCHHHHHHHHHh
Confidence 4566665432 1 234579999999999999776542 012445555533211110111
Q ss_pred CcccccceeeecCCcc---ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHH
Q 044174 90 LPQQREYYSAGVPGSF---HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAK 166 (332)
Q Consensus 90 l~~~~~~f~~~vpgSF---y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~ 166 (332)
-+. +-.. -...+ -..-+|..++|++.+..++|||.+
T Consensus 128 ~~r---v~~~-~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~~------------------------------------- 166 (291)
T 3hp7_A 128 DDR---VRSM-EQYNFRYAEPVDFTEGLPSFASIDVSFISLNL------------------------------------- 166 (291)
T ss_dssp CTT---EEEE-CSCCGGGCCGGGCTTCCCSEEEECCSSSCGGG-------------------------------------
T ss_pred Ccc---ccee-cccCceecchhhCCCCCCCEEEEEeeHhhHHH-------------------------------------
Confidence 111 0000 00000 011256678999999999998733
Q ss_pred HHHHHHHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHH
Q 044174 167 DMENFLNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKL 246 (332)
Q Consensus 167 d~~~fL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ 246 (332)
.|..-++-|+|||++++.+--.-+... . ..+ ..|.+... -.+..+.+++.+.
T Consensus 167 ----vL~e~~rvLkpGG~lv~lvkPqfe~~~-~--~~~--------------~~G~vrd~-------~~~~~~~~~v~~~ 218 (291)
T 3hp7_A 167 ----ILPALAKILVDGGQVVALVKPQFEAGR-E--QIG--------------KNGIVRES-------SIHEKVLETVTAF 218 (291)
T ss_dssp ----THHHHHHHSCTTCEEEEEECGGGTSCG-G--GCC---------------CCCCCCH-------HHHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCcCCEEEEEECcccccCh-h--hcC--------------CCCccCCH-------HHHHHHHHHHHHH
Confidence 233334678899999997411000000 0 000 12433211 1244578999999
Q ss_pred HHhCCceEEeEEEEe
Q 044174 247 VDKNGHFSIKTVELT 261 (332)
Q Consensus 247 ie~~G~F~I~~le~~ 261 (332)
++..| |.+..+..-
T Consensus 219 ~~~~G-f~v~~~~~s 232 (291)
T 3hp7_A 219 AVDYG-FSVKGLDFS 232 (291)
T ss_dssp HHHTT-EEEEEEEEC
T ss_pred HHHCC-CEEEEEEEC
Confidence 99999 998887654
No 132
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.58 E-value=0.00018 Score=68.01 Aligned_cols=102 Identities=18% Similarity=0.212 Sum_probs=62.6
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCcccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFHH 107 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy~ 107 (332)
..+|+|+|||+|..++.+++. +.-+|+--|.. +.....+...... .--+.-+.|.+.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~------------------g~~~v~~vD~s--~~~~~a~~~~~~~~~~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH------------------GAKHVIGVDMS--SIIEMAKELVELNGFSDKITLLRGKLED 98 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT------------------CCSEEEEEESS--THHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCEEEEecCccHHHHHHHHHC------------------CCCEEEEEChH--HHHHHHHHHHHHcCCCCCEEEEECchhh
Confidence 469999999999988765421 11356777764 3444333321111 1112334555655
Q ss_pred CCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
-.+|.+++|+++|....+.+... .++..+|+.+.+-|+|||+++
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~-----------------------------------~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYE-----------------------------------SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTT-----------------------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred ccCCCCcccEEEEeCchhhcccH-----------------------------------HHHHHHHHHHHhhcCCCeEEE
Confidence 56788999999997544432211 123457888889999999997
No 133
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.56 E-value=0.00053 Score=67.69 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=19.3
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|..++.++..
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~ 263 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALE 263 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHH
Confidence 44579999999999999988753
No 134
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.54 E-value=0.00014 Score=67.57 Aligned_cols=48 Identities=10% Similarity=0.293 Sum_probs=33.6
Q ss_pred ccccCCcC-CCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 044174 104 SFHHRLFP-QSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSG 182 (332)
Q Consensus 104 SFy~~lfP-~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pG 182 (332)
...+..|| .+++|+|+|.+.|||+.. + +....|+.=++-|+||
T Consensus 202 dl~~~~~~~~~~fDlI~crnvliyf~~--~----------------------------------~~~~vl~~~~~~L~pg 245 (274)
T 1af7_A 202 NLLEKQYNVPGPFDAIFCRNVMIYFDK--T----------------------------------TQEDILRRFVPLLKPD 245 (274)
T ss_dssp CTTCSSCCCCCCEEEEEECSSGGGSCH--H----------------------------------HHHHHHHHHGGGEEEE
T ss_pred ccCCCCCCcCCCeeEEEECCchHhCCH--H----------------------------------HHHHHHHHHHHHhCCC
Confidence 33443355 578999999999999743 1 1234556666889999
Q ss_pred CeEEE
Q 044174 183 GMMVI 187 (332)
Q Consensus 183 G~mvl 187 (332)
|.|++
T Consensus 246 G~L~l 250 (274)
T 1af7_A 246 GLLFA 250 (274)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99987
No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.54 E-value=0.00034 Score=61.79 Aligned_cols=22 Identities=23% Similarity=0.240 Sum_probs=17.8
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
.+..+|+|+|||+|..+..+.+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~ 77 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLAD 77 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHH
T ss_pred CCCCEEEEECCcCCHHHHHHHH
Confidence 3457999999999998877654
No 136
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.53 E-value=0.00034 Score=62.73 Aligned_cols=23 Identities=13% Similarity=0.216 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhhccCCeEEEE
Q 044174 166 KDMENFLNARAEEIVSGGMMVII 188 (332)
Q Consensus 166 ~d~~~fL~~Ra~EL~pGG~mvl~ 188 (332)
.|...||+.-++-|||||+|++.
T Consensus 147 ~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 147 HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cchhhhhhhhhheeCCCCEEEEE
Confidence 35667777778899999999764
No 137
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.52 E-value=0.00043 Score=60.94 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=18.2
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..+..+..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~ 90 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAE 90 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHH
Confidence 3356999999999999988764
No 138
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.51 E-value=0.0012 Score=58.40 Aligned_cols=23 Identities=13% Similarity=0.193 Sum_probs=18.8
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
.+..+|+|+|||+|..++.+.+.
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~ 95 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADI 95 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHH
T ss_pred CCCCEEEEEcccCCHHHHHHHHH
Confidence 34579999999999999887654
No 139
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.46 E-value=0.00029 Score=59.39 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=17.6
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
....+|+|+|||+|..++.+.
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~ 52 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELA 52 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHH
Confidence 345799999999999988775
No 140
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.45 E-value=0.00031 Score=66.11 Aligned_cols=77 Identities=9% Similarity=0.057 Sum_probs=22.8
Q ss_pred HHHHHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHhh--ccchhhhcccCcCccc----CCHHHHHH
Q 044174 172 LNARAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANEQ--LITEAELDSFNLPIYS----ASSEEMVK 245 (332)
Q Consensus 172 L~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~eG--li~~e~~d~fn~P~y~----ps~~E~~~ 245 (332)
|..-.+-|+|||++++..... +.+...+..|...+ +..+.......-.|.. +...+|.+
T Consensus 202 l~~~~~~LkpgG~lv~~~~~~---------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~ 266 (336)
T 2b25_A 202 LPVFYPHLKHGGVCAVYVVNI---------------TQVIELLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQ 266 (336)
T ss_dssp HHHHGGGEEEEEEEEEEESSH---------------HHHHHHHHHHHHHTCCEEEEEEECCCCCCEEECC----------
T ss_pred HHHHHHhcCCCcEEEEEeCCH---------------HHHHHHHHHHHhcCCCcccceEEEecccceEEEeecccccchhh
Confidence 344457889999999877431 13333444443322 1111111112223332 23349999
Q ss_pred HHHhCCceEEeEEEEeCCC
Q 044174 246 LVDKNGHFSIKTVELTNPT 264 (332)
Q Consensus 246 ~ie~~G~F~I~~le~~~p~ 264 (332)
.++++| |++.+++...+.
T Consensus 267 ~l~~aG-F~~v~~~~~~~~ 284 (336)
T 2b25_A 267 KVESKI-NTDVQLDSQEKI 284 (336)
T ss_dssp -------------------
T ss_pred hhcccc-cccccccccccc
Confidence 999999 998877755443
No 141
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.44 E-value=0.0012 Score=56.62 Aligned_cols=117 Identities=15% Similarity=0.164 Sum_probs=60.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc-cceeeecCCcccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR-EYYSAGVPGSFHH 107 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~-~~f~~~vpgSFy~ 107 (332)
...+|+|+|||+|..++.+++.. . |.-+|+..|.-..=....=+.+.... .--+.-+-+++..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~--------~--------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 85 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLV--------G--------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQN 85 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHH--------C--------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGG
T ss_pred CCCEEEEcCCCCCHHHHHHHHHh--------C--------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHH
Confidence 34699999999999988776531 0 11244444432211111111111100 0112233444433
Q ss_pred CC-cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEE
Q 044174 108 RL-FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 108 ~l-fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mv 186 (332)
-. ++++++|+++++..+ .|.. + +.+. . . ..+...+|+.-.+-|+|||+++
T Consensus 86 ~~~~~~~~fD~v~~~~~~-----~~~~--~--------~~~~-~--~-----------~~~~~~~l~~~~~~Lk~gG~l~ 136 (197)
T 3eey_A 86 MDKYIDCPVKAVMFNLGY-----LPSG--D--------HSIS-T--R-----------PETTIQALSKAMELLVTGGIIT 136 (197)
T ss_dssp GGGTCCSCEEEEEEEESB-----CTTS--C--------TTCB-C--C-----------HHHHHHHHHHHHHHEEEEEEEE
T ss_pred HhhhccCCceEEEEcCCc-----ccCc--c--------cccc-c--C-----------cccHHHHHHHHHHhCcCCCEEE
Confidence 32 566899999997655 1211 0 0010 0 0 0133446777778899999999
Q ss_pred EEec
Q 044174 187 IIMP 190 (332)
Q Consensus 187 l~~~ 190 (332)
+...
T Consensus 137 ~~~~ 140 (197)
T 3eey_A 137 VVIY 140 (197)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8864
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.44 E-value=0.00062 Score=59.21 Aligned_cols=82 Identities=10% Similarity=0.010 Sum_probs=43.6
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccc--cccceeeecCCc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQ--QREYYSAGVPGS 104 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~--~~~~f~~~vpgS 104 (332)
....+|+|+|||+|..+..+.... .|..+|+..|.-. +.-...+. +.. ..+ +.-+.+.
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~----------------~~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~--v~~~~~d 136 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIV----------------GEDGLVVSIERIP-ELAEKAERTLRKLGYDN--VIVIVGD 136 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH----------------CTTSEEEEEESCH-HHHHHHHHHHHHHTCTT--EEEEESC
T ss_pred CCCCEEEEECCCccHHHHHHHHHh----------------CCCCEEEEEeCCH-HHHHHHHHHHHHcCCCC--eEEEECC
Confidence 345699999999999998775432 0112344444321 11111111 100 011 2223344
Q ss_pred cccCCcCCCceeEEEecCcccccc
Q 044174 105 FHHRLFPQSSIHFAHCSYALHWLS 128 (332)
Q Consensus 105 Fy~~lfP~~svd~~~S~~alHWLs 128 (332)
+...+.+.+++|+++++.++|++.
T Consensus 137 ~~~~~~~~~~fD~v~~~~~~~~~~ 160 (215)
T 2yxe_A 137 GTLGYEPLAPYDRIYTTAAGPKIP 160 (215)
T ss_dssp GGGCCGGGCCEEEEEESSBBSSCC
T ss_pred cccCCCCCCCeeEEEECCchHHHH
Confidence 433333367899999999999853
No 143
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.43 E-value=7.9e-05 Score=66.00 Aligned_cols=70 Identities=9% Similarity=0.126 Sum_probs=46.1
Q ss_pred CCceEEEeecCCCCcchHHHH--------------HHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAM--------------QDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ 93 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~--------------~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~ 93 (332)
+.+-+|+|+|||+|+.++.++ ...++..++.....+. .-.+.+ .|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~---~~~v~~--~d~--------------- 107 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKT---TIKYRF--LNK--------------- 107 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCC---SSEEEE--ECC---------------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCC---CccEEE--ecc---------------
Confidence 446799999999999999985 3456655555443321 001221 222
Q ss_pred ccceeeecCCccccCCcCCCceeEEEecCccccccCC
Q 044174 94 REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKV 130 (332)
Q Consensus 94 ~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~ 130 (332)
-. ..|..++|++.++..+|-|.+.
T Consensus 108 ------------~~-~~~~~~~DvVLa~k~LHlL~~~ 131 (200)
T 3fzg_A 108 ------------ES-DVYKGTYDVVFLLKMLPVLKQQ 131 (200)
T ss_dssp ------------HH-HHTTSEEEEEEEETCHHHHHHT
T ss_pred ------------cc-cCCCCCcChhhHhhHHHhhhhh
Confidence 11 1477899999999999999443
No 144
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.42 E-value=0.00017 Score=61.73 Aligned_cols=118 Identities=17% Similarity=0.116 Sum_probs=65.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeec-CCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGV-PGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~v-pgSFy 106 (332)
....+|+|+|||+|..++.+.+.. ...+.....+.-+|+-.|+-..- .++ . +..+ .+.+.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~--------~~~~~~~~~~~~~v~~vD~s~~~------~~~---~--~~~~~~~d~~ 81 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKV--------NAAGTDPSSPVGFVLGVDLLHIF------PLE---G--ATFLCPADVT 81 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHT--------TTTCCCTTSCCCEEEEECSSCCC------CCT---T--CEEECSCCTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--------ccccccccCCCceEEEEechhcc------cCC---C--CeEEEeccCC
Confidence 345799999999999998775431 10000011233567777765420 011 1 1112 33333
Q ss_pred cC--------CcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044174 107 HR--------LFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEE 178 (332)
Q Consensus 107 ~~--------lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~E 178 (332)
.. .+|++++|+++|+.++||.-.. ..+ + .........+|+.-.+-
T Consensus 82 ~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~---~~~-----------------~-------~~~~~~~~~~l~~~~~~ 134 (196)
T 2nyu_A 82 DPRTSQRILEVLPGRRADVILSDMAPNATGFR---DLD-----------------H-------DRLISLCLTLLSVTPDI 134 (196)
T ss_dssp SHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH---HHH-----------------H-------HHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc---ccC-----------------H-------HHHHHHHHHHHHHHHHH
Confidence 22 2567899999998777763210 000 0 01112234566666788
Q ss_pred hccCCeEEEEecc
Q 044174 179 IVSGGMMVIIMPG 191 (332)
Q Consensus 179 L~pGG~mvl~~~g 191 (332)
|+|||+|++....
T Consensus 135 LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 135 LQPGGTFLCKTWA 147 (196)
T ss_dssp EEEEEEEEEEECC
T ss_pred hcCCCEEEEEecC
Confidence 9999999998653
No 145
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.40 E-value=0.00023 Score=67.50 Aligned_cols=106 Identities=11% Similarity=0.163 Sum_probs=62.7
Q ss_pred eEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccccCC
Q 044174 31 IRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFHHRL 109 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy~~l 109 (332)
-+|+|+|||+|..++.+... .|..+|+..|.... .-...+. +... ..-...+.+.+..
T Consensus 198 ~~VLDlGcG~G~~~~~la~~-----------------~~~~~v~~vD~s~~-~l~~a~~~~~~~-~~~~~~~~~d~~~-- 256 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARH-----------------SPKIRLTLCDVSAP-AVEASRATLAAN-GVEGEVFASNVFS-- 256 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHH-----------------CTTCBCEEEESBHH-HHHHHHHHHHHT-TCCCEEEECSTTT--
T ss_pred CeEEEecCccCHHHHHHHHH-----------------CCCCEEEEEECCHH-HHHHHHHHHHHh-CCCCEEEEccccc--
Confidence 48999999999999877532 12234444443211 0111111 1100 0001113445544
Q ss_pred cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEe
Q 044174 110 FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 110 fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
++++++|+++|+..+||... ....+...+|+.-.+-|+|||++++..
T Consensus 257 ~~~~~fD~Iv~~~~~~~g~~---------------------------------~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 257 EVKGRFDMIISNPPFHDGMQ---------------------------------TSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp TCCSCEEEEEECCCCCSSSH---------------------------------HHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccCCeeEEEECCCcccCcc---------------------------------CCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 34789999999999998321 112356678888889999999999976
Q ss_pred c
Q 044174 190 P 190 (332)
Q Consensus 190 ~ 190 (332)
.
T Consensus 304 ~ 304 (343)
T 2pjd_A 304 N 304 (343)
T ss_dssp E
T ss_pred c
Confidence 3
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.40 E-value=0.00074 Score=61.44 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhccCCeEEEEecc
Q 044174 167 DMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 167 d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
++..||+.=++-|+|||+|+++...
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 4677888888999999999998743
No 147
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.38 E-value=0.00096 Score=65.33 Aligned_cols=126 Identities=13% Similarity=0.191 Sum_probs=72.5
Q ss_pred CCceEEEeecCC------CCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeec
Q 044174 28 SNIIRLADLGCA------VGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGV 101 (332)
Q Consensus 28 ~~~~~iaD~GCs------~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~v 101 (332)
.++.+|+|+||| +|..|+.++.. . .|..+|+--|+-.+- .+ ...+ +.-+
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~-------~---------fP~a~V~GVDiSp~m---~~----~~~r--I~fv 269 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKS-------F---------FPRGQIYGLDIMDKS---HV----DELR--IRTI 269 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHH-------H---------CTTCEEEEEESSCCG---GG----CBTT--EEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHH-------h---------CCCCEEEEEECCHHH---hh----cCCC--cEEE
Confidence 446899999999 78888776442 1 123466666664441 11 1111 2223
Q ss_pred CCccccCCcC------CCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHH
Q 044174 102 PGSFHHRLFP------QSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNAR 175 (332)
Q Consensus 102 pgSFy~~lfP------~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~R 175 (332)
-|+..+.-|+ ++++|+|+|..+ ||. .|+..+|+.=
T Consensus 270 ~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~--------------------------------------~d~~~aL~el 310 (419)
T 3sso_A 270 QGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN--------------------------------------AHVRTSFAAL 310 (419)
T ss_dssp ECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH--------------------------------------HHHHHHHHHH
T ss_pred EecccccchhhhhhcccCCccEEEECCc-ccc--------------------------------------hhHHHHHHHH
Confidence 3455444455 689999999765 541 1334466666
Q ss_pred HHhhccCCeEEEEecccCCCCCCC-----CcchhHHHHHHHHHHHHH
Q 044174 176 AEEIVSGGMMVIIMPGIPYGMPYS-----HLTNGVMYDLMATIFMEL 217 (332)
Q Consensus 176 a~EL~pGG~mvl~~~gr~~~~~~~-----~~~~~~~~~~l~~al~~m 217 (332)
.+-|||||++++.-.-........ ......+.+.++..+.++
T Consensus 311 ~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l 357 (419)
T 3sso_A 311 FPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAI 357 (419)
T ss_dssp GGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHh
Confidence 688999999999754321110000 002244566777777766
No 148
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.36 E-value=0.00036 Score=58.80 Aligned_cols=20 Identities=35% Similarity=0.287 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
..-+|+|+|||+|..++.++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHH
Confidence 35699999999999998765
No 149
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.35 E-value=0.00076 Score=60.98 Aligned_cols=126 Identities=10% Similarity=0.069 Sum_probs=61.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc-cceeeecCCcccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR-EYYSAGVPGSFHH 107 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~-~~f~~~vpgSFy~ 107 (332)
...+|+|+|||+|..++.+.+. .+. +|+..|.-..=....-+++.... .--+..+-+++.+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~-----------------~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTR-----------------TKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKK 110 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTT-----------------CCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred CCCEEEEcCCchhHHHHHHHHh-----------------cCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHH
Confidence 4679999999999988876421 011 44444442211111111111000 0012223344433
Q ss_pred CC--cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 108 RL--FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 108 ~l--fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
-. +|++++|+|+|+-.++.....- ..+ +......-......++..+|+.=++-|+|||++
T Consensus 111 ~~~~~~~~~fD~Ii~npPy~~~~~~~--~~~----------------~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 172 (259)
T 3lpm_A 111 ITDLIPKERADIVTCNPPYFATPDTS--LKN----------------TNEHFRIARHEVMCTLEDTIRVAASLLKQGGKA 172 (259)
T ss_dssp GGGTSCTTCEEEEEECCCC-----------------------------------------HHHHHHHHHHHHHEEEEEEE
T ss_pred hhhhhccCCccEEEECCCCCCCcccc--CCC----------------CchHHHhhhccccCCHHHHHHHHHHHccCCcEE
Confidence 22 5789999999975554431100 000 000000001112356778888888999999999
Q ss_pred EEEec
Q 044174 186 VIIMP 190 (332)
Q Consensus 186 vl~~~ 190 (332)
++...
T Consensus 173 ~~~~~ 177 (259)
T 3lpm_A 173 NFVHR 177 (259)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99763
No 150
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.34 E-value=0.00092 Score=59.35 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=18.0
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...+|+|+|||+|..++.+...
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~ 112 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEI 112 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHH
Confidence 3468999999999999887653
No 151
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.34 E-value=0.0015 Score=58.29 Aligned_cols=76 Identities=14% Similarity=-0.006 Sum_probs=42.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cccc-cceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQQR-EYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~~~-~~f~~~vpgSF 105 (332)
....+|+|+|||+|..++.++..+ .|..+|+..|.-. +.-...+.. .... .-.+..+-+++
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~----------------~~~~~v~~~D~~~-~~~~~a~~~~~~~~~~~~v~~~~~d~ 154 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIV----------------GPEGRVVSYEIRE-DFAKLAWENIKWAGFDDRVTIKLKDI 154 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH----------------CTTSEEEEECSCH-HHHHHHHHHHHHHTCTTTEEEECSCG
T ss_pred CCCCEEEEecCCchHHHHHHHHHh----------------CCCeEEEEEecCH-HHHHHHHHHHHHcCCCCceEEEECch
Confidence 345799999999999998875432 1223455555422 122222211 1000 11234455666
Q ss_pred ccCCcCCCceeEEEec
Q 044174 106 HHRLFPQSSIHFAHCS 121 (332)
Q Consensus 106 y~~lfP~~svd~~~S~ 121 (332)
.+ .+|++++|+++++
T Consensus 155 ~~-~~~~~~~D~v~~~ 169 (255)
T 3mb5_A 155 YE-GIEEENVDHVILD 169 (255)
T ss_dssp GG-CCCCCSEEEEEEC
T ss_pred hh-ccCCCCcCEEEEC
Confidence 63 4888999999983
No 152
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.33 E-value=0.00061 Score=56.54 Aligned_cols=21 Identities=19% Similarity=0.099 Sum_probs=17.5
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
+.-+|+|+|||+|..++.+.+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~ 61 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAAS 61 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHH
Confidence 356899999999999987753
No 153
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.32 E-value=0.00024 Score=62.47 Aligned_cols=87 Identities=10% Similarity=-0.021 Sum_probs=45.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-----cceeeec
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-----EYYSAGV 101 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-----~~f~~~v 101 (332)
....+|+|+|||+|..++.+.... .. ...|..+|+-.|.-. +.-...+. +.... .--+..+
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~--------~~----~~~~~~~v~~vD~~~-~~~~~a~~~~~~~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKM--------NV----LENKNSYVIGLERVK-DLVNFSLENIKRDKPELLKIDNFKII 145 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHT--------TT----TTCTTCEEEEEESCH-HHHHHHHHHHHHHCGGGGSSTTEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHh--------cc----cCCCCCEEEEEeCCH-HHHHHHHHHHHHcCccccccCCEEEE
Confidence 335799999999999887765421 00 001334555555422 11111111 11000 0012223
Q ss_pred CCccccCC----cCCCceeEEEecCccccc
Q 044174 102 PGSFHHRL----FPQSSIHFAHCSYALHWL 127 (332)
Q Consensus 102 pgSFy~~l----fP~~svd~~~S~~alHWL 127 (332)
-+....-+ ++.+++|++++..++|++
T Consensus 146 ~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 146 HKNIYQVNEEEKKELGLFDAIHVGASASEL 175 (227)
T ss_dssp ECCGGGCCHHHHHHHCCEEEEEECSBBSSC
T ss_pred ECChHhcccccCccCCCcCEEEECCchHHH
Confidence 44554444 556789999999998863
No 154
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.29 E-value=0.00063 Score=59.30 Aligned_cols=19 Identities=21% Similarity=0.018 Sum_probs=16.5
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
..+|+|+|||+|..++.++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~ 72 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEAL 72 (201)
T ss_dssp TCEEEETTCTTCHHHHHHH
T ss_pred CCeEEEcCCccCHHHHHHH
Confidence 4689999999999998765
No 155
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.28 E-value=0.00046 Score=58.28 Aligned_cols=20 Identities=25% Similarity=0.117 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
...+|+|+|||+|..++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~ 63 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAV 63 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHH
T ss_pred CCCCEEEeCCccCHHHHHHH
Confidence 35699999999999998765
No 156
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.27 E-value=0.0013 Score=59.17 Aligned_cols=73 Identities=21% Similarity=0.178 Sum_probs=40.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..+..+.+.. +..+|+--|.-.+ .-...+.... + +..+.+++..-
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~s~~-~~~~a~~~~~--~--~~~~~~d~~~~ 142 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-----------------PEITTFGLDVSKV-AIKAAAKRYP--Q--VTFCVASSHRL 142 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-----------------TTSEEEEEESCHH-HHHHHHHHCT--T--SEEEECCTTSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-----------------CCCeEEEEeCCHH-HHHHHHHhCC--C--cEEEEcchhhC
Confidence 45799999999999997764421 1124444443221 1111111111 1 11233444444
Q ss_pred CcCCCceeEEEecCc
Q 044174 109 LFPQSSIHFAHCSYA 123 (332)
Q Consensus 109 lfP~~svd~~~S~~a 123 (332)
.++++++|+++|+.+
T Consensus 143 ~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 143 PFSDTSMDAIIRIYA 157 (269)
T ss_dssp SBCTTCEEEEEEESC
T ss_pred CCCCCceeEEEEeCC
Confidence 578899999998644
No 157
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.26 E-value=0.0042 Score=54.19 Aligned_cols=22 Identities=23% Similarity=0.134 Sum_probs=18.3
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..++.+..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~ 75 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCL 75 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHH
Confidence 3457999999999999988764
No 158
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.26 E-value=0.00077 Score=58.14 Aligned_cols=20 Identities=25% Similarity=0.187 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..++.+..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~ 85 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSI 85 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHH
Confidence 46999999999999988754
No 159
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.23 E-value=0.0012 Score=57.85 Aligned_cols=22 Identities=18% Similarity=0.132 Sum_probs=18.1
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..+..+..
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~ 97 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFAR 97 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHH
Confidence 3457999999999999987754
No 160
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.20 E-value=0.0022 Score=58.06 Aligned_cols=76 Identities=17% Similarity=0.128 Sum_probs=42.6
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Cccc-c--cceeeecCCc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQ-R--EYYSAGVPGS 104 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~-~--~~f~~~vpgS 104 (332)
...+|+|+|||+|..++.++..+ .|..+|+--|.-. +.-...+. +... . .--+..+.++
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~----------------~~~~~v~~vD~~~-~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAV----------------GPAGQVISYEQRA-DHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHH----------------CTTSEEEEECSCH-HHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred CCCEEEEEcccccHHHHHHHHHh----------------CCCCEEEEEeCCH-HHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 34689999999999988775431 0123455555421 11111111 1110 0 0113345566
Q ss_pred cccCCcCCCceeEEEec
Q 044174 105 FHHRLFPQSSIHFAHCS 121 (332)
Q Consensus 105 Fy~~lfP~~svd~~~S~ 121 (332)
+....+|++++|++++.
T Consensus 162 ~~~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 162 LADSELPDGSVDRAVLD 178 (280)
T ss_dssp GGGCCCCTTCEEEEEEE
T ss_pred hHhcCCCCCceeEEEEC
Confidence 66666788999999983
No 161
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.20 E-value=0.0022 Score=56.33 Aligned_cols=20 Identities=15% Similarity=0.257 Sum_probs=17.3
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.++.
T Consensus 59 ~~~vLdiG~G~G~~~~~la~ 78 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMAR 78 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEECCCCCHHHHHHHH
Confidence 46999999999999988753
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.17 E-value=0.0012 Score=57.48 Aligned_cols=19 Identities=16% Similarity=0.085 Sum_probs=16.6
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
..+|+|+|||+|..++.++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEAL 73 (202)
T ss_dssp TCEEEETTCTTCHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHH
Confidence 4689999999999998765
No 163
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.16 E-value=0.0012 Score=59.15 Aligned_cols=22 Identities=14% Similarity=0.001 Sum_probs=18.3
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
+..+|+|+|||+|..++.++..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~ 86 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGAT 86 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHh
Confidence 4579999999999999887643
No 164
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.15 E-value=0.0017 Score=60.66 Aligned_cols=81 Identities=11% Similarity=-0.017 Sum_probs=44.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC-cc--cccceeeecCCcc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL-PQ--QREYYSAGVPGSF 105 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l-~~--~~~~f~~~vpgSF 105 (332)
...+|+|+|||+|..++.+....- ...+|+-.|+-. +.-...+.. .. ..+ +..+-+.+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~----------------~~~~v~gvD~s~-~~~~~a~~~~~~~g~~~--v~~~~~d~ 135 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVG----------------EKGLVVSVEYSR-KICEIAKRNVERLGIEN--VIFVCGDG 135 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC----------------TTCEEEEEESCH-HHHHHHHHHHHHTTCCS--EEEEESCG
T ss_pred CcCEEEEecCCchHHHHHHHHhcC----------------CCCEEEEEECCH-HHHHHHHHHHHHcCCCC--eEEEECCh
Confidence 357999999999998887754311 012233333211 111111111 00 011 22334455
Q ss_pred ccCCcCCCceeEEEecCcccccc
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLS 128 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs 128 (332)
...+.+.+++|+++|...+|++.
T Consensus 136 ~~~~~~~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 136 YYGVPEFSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp GGCCGGGCCEEEEEECSBBSCCC
T ss_pred hhccccCCCeEEEEEcCCHHHHH
Confidence 54455568999999999998743
No 165
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.12 E-value=0.00068 Score=65.69 Aligned_cols=20 Identities=25% Similarity=0.546 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhccCCeEE
Q 044174 167 DMENFLNARAEEIVSGGMMV 186 (332)
Q Consensus 167 d~~~fL~~Ra~EL~pGG~mv 186 (332)
.+..+|.+|.+=|+|||+|+
T Consensus 167 ~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 167 MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhHHHHHHhhCCCCceEC
Confidence 34568889999999999987
No 166
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.11 E-value=0.002 Score=58.35 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=18.5
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..++.+..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~ 100 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKI 100 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHH
Confidence 4567999999999999988753
No 167
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.10 E-value=0.00029 Score=62.25 Aligned_cols=22 Identities=23% Similarity=0.163 Sum_probs=18.2
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...+|+|+|||+|..+..+...
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~ 105 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRY 105 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHh
Confidence 3569999999999999877653
No 168
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.09 E-value=0.0008 Score=60.05 Aligned_cols=20 Identities=15% Similarity=0.375 Sum_probs=17.4
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
+..+|+|+|||+|..++.+.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la 89 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIK 89 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHH
Confidence 45799999999999998875
No 169
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.08 E-value=0.0041 Score=56.15 Aligned_cols=22 Identities=18% Similarity=0.237 Sum_probs=18.2
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|+|||+|..|..+.+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~ 96 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSD 96 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHHHHHHH
Confidence 4458999999999998877654
No 170
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.07 E-value=0.00038 Score=64.50 Aligned_cols=23 Identities=30% Similarity=0.364 Sum_probs=18.9
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|.-|..+++.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~ 103 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ 103 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc
Confidence 34579999999999998877654
No 171
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.07 E-value=0.0016 Score=58.28 Aligned_cols=22 Identities=18% Similarity=-0.000 Sum_probs=18.2
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...+|+|+|||+|..++.+...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~ 72 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLL 72 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHH
Confidence 4689999999999888777553
No 172
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.07 E-value=0.006 Score=50.76 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=17.2
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
+..+|+|+|||+|..++.+.
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~ 54 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIA 54 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHH
Confidence 45699999999999988875
No 173
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.05 E-value=0.00044 Score=63.68 Aligned_cols=23 Identities=30% Similarity=0.413 Sum_probs=18.8
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|.-|..+.+.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~ 95 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR 95 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc
Confidence 34579999999999998877654
No 174
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.04 E-value=0.0011 Score=62.98 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=41.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy 106 (332)
+..+|+|+|||+|..++.+++. +..+|+--|.. ..-...+...... .--+..+.+.+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~------------------g~~~V~~vD~s--~~~~~a~~~~~~~~l~~~v~~~~~d~~ 109 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA------------------GARKIYAVEAS--TMAQHAEVLVKSNNLTDRIVVIPGKVE 109 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT------------------TCSEEEEEECS--THHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CcCEEEEcCCCccHHHHHHHhC------------------CCCEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEEcchh
Confidence 3469999999999988766431 11356666653 2223322221100 011223444444
Q ss_pred cCCcCCCceeEEEecCccc
Q 044174 107 HRLFPQSSIHFAHCSYALH 125 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alH 125 (332)
+-.+| +++|+++|...+|
T Consensus 110 ~~~~~-~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 110 EVSLP-EQVDIIISEPMGY 127 (348)
T ss_dssp TCCCS-SCEEEEEECCCBT
T ss_pred hCCCC-CceeEEEEeCchh
Confidence 43344 6899999986654
No 175
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.00 E-value=0.0041 Score=54.96 Aligned_cols=23 Identities=17% Similarity=0.157 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|..++.+.+.
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~ 98 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDI 98 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEEcccCCHHHHHHHHH
Confidence 34579999999999999887553
No 176
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.99 E-value=0.0019 Score=59.42 Aligned_cols=107 Identities=12% Similarity=0.036 Sum_probs=61.4
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCc-----cc--------ccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLP-----QQ--------REY 96 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~-----~~--------~~~ 96 (332)
..+|+|+|||+|..++.+... + .-+|+..|.++.+.-...+... .. .++
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~------------~------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLA------------G------ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHT------------T------CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred CCeEEEecccccHHHHHHHHc------------C------CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 469999999999988765321 1 1256777765444443333221 10 011
Q ss_pred -eeeecCCccccCCc---CCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHH
Q 044174 97 -YSAGVPGSFHHRLF---PQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFL 172 (332)
Q Consensus 97 -f~~~vpgSFy~~lf---P~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL 172 (332)
+....-|.....+. +++++|+|+++.++|+... ...+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~--------------------------------------~~~ll 183 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA--------------------------------------HDALL 183 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG--------------------------------------HHHHH
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHH--------------------------------------HHHHH
Confidence 11111222222232 5789999999888887322 22345
Q ss_pred HHHHHhhc---c--CCeEEEEeccc
Q 044174 173 NARAEEIV---S--GGMMVIIMPGI 192 (332)
Q Consensus 173 ~~Ra~EL~---p--GG~mvl~~~gr 192 (332)
+.-.+-|+ | ||++++.+..+
T Consensus 184 ~~l~~~Lk~~~p~~gG~l~v~~~~~ 208 (281)
T 3bzb_A 184 RSVKMLLALPANDPTAVALVTFTHH 208 (281)
T ss_dssp HHHHHHBCCTTTCTTCEEEEEECC-
T ss_pred HHHHHHhcccCCCCCCEEEEEEEee
Confidence 55556788 9 99998887654
No 177
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.98 E-value=0.0021 Score=57.07 Aligned_cols=19 Identities=16% Similarity=0.480 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
..+|+|+|||+|..++.++
T Consensus 72 ~~~vLDiG~G~G~~~~~la 90 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFA 90 (232)
T ss_dssp CCEEEEECCSSSHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHH
Confidence 4699999999999998775
No 178
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.97 E-value=0.0023 Score=56.97 Aligned_cols=76 Identities=9% Similarity=-0.045 Sum_probs=40.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Cccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~-~~~f~~~vpgSF 105 (332)
....+|+|+|||+|..++.+++.+ + |..+|+..|.-. +.-...+. +... ..--+..+.+++
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~-----------~-----~~~~v~~~D~~~-~~~~~a~~~~~~~~g~~~v~~~~~d~ 157 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAV-----------G-----EKGLVESYEARP-HHLAQAERNVRAFWQVENVRFHLGKL 157 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH-----------C-----TTSEEEEEESCH-HHHHHHHHHHHHHCCCCCEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHh-----------C-----CCCEEEEEeCCH-HHHHHHHHHHHHhcCCCCEEEEECch
Confidence 345699999999999998775532 0 122444444321 11111111 1110 001123344555
Q ss_pred ccCCcCCCceeEEEe
Q 044174 106 HHRLFPQSSIHFAHC 120 (332)
Q Consensus 106 y~~lfP~~svd~~~S 120 (332)
.+..+|++++|++++
T Consensus 158 ~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 158 EEAELEEAAYDGVAL 172 (258)
T ss_dssp GGCCCCTTCEEEEEE
T ss_pred hhcCCCCCCcCEEEE
Confidence 554478889999998
No 179
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.95 E-value=0.0029 Score=59.30 Aligned_cols=21 Identities=14% Similarity=0.183 Sum_probs=17.8
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~ 96 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVL 96 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHH
Confidence 456799999999999988775
No 180
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.94 E-value=0.0012 Score=61.75 Aligned_cols=21 Identities=14% Similarity=0.118 Sum_probs=17.8
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+++.+|+|+|||+|..+..++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~ 114 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVL 114 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHH
Confidence 456799999999999988765
No 181
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.94 E-value=0.00071 Score=63.52 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.9
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|.-|..+++.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~ 103 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL 103 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc
Confidence 33579999999999999887654
No 182
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.90 E-value=0.0032 Score=59.13 Aligned_cols=21 Identities=14% Similarity=-0.189 Sum_probs=16.9
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
....+|+|+|||+|+-|..++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~l 141 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILL 141 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHH
T ss_pred CCcCEEEEECCCccHHHHHHH
Confidence 556899999999998775544
No 183
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.90 E-value=0.004 Score=66.02 Aligned_cols=110 Identities=12% Similarity=0.081 Sum_probs=64.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Cc----c--cccceeeec
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LP----Q--QREYYSAGV 101 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~----~--~~~~f~~~v 101 (332)
...+|+|+|||+|..++.+... + .+..+|+--|+-.. .-...+. +. . ...--+..+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~------------g----~p~a~VtGVDIS~e-mLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDY------------P----TSLQTIIGVDISPK-GLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSS------------C----CCCCEEEEEESCHH-HHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh------------C----CCCCeEEEEECCHH-HHHHHHHHhhhccchhhcCCCceEEE
Confidence 3579999999999998776421 0 12234444444221 1111111 00 0 000112334
Q ss_pred CCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044174 102 PGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS 181 (332)
Q Consensus 102 pgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p 181 (332)
-|+.....++.+++|+|+++.++||+.. .+...||+.-.+-|+|
T Consensus 784 qGDa~dLp~~d~sFDlVV~~eVLeHL~d------------------------------------p~l~~~L~eI~RvLKP 827 (950)
T 3htx_A 784 DGSILEFDSRLHDVDIGTCLEVIEHMEE------------------------------------DQACEFGEKVLSLFHP 827 (950)
T ss_dssp ESCTTSCCTTSCSCCEEEEESCGGGSCH------------------------------------HHHHHHHHHHHHTTCC
T ss_pred ECchHhCCcccCCeeEEEEeCchhhCCh------------------------------------HHHHHHHHHHHHHcCC
Confidence 4555566667899999999999999654 1223466666788899
Q ss_pred CCeEEEEeccc
Q 044174 182 GGMMVIIMPGI 192 (332)
Q Consensus 182 GG~mvl~~~gr 192 (332)
| .+++..+.+
T Consensus 828 G-~LIISTPN~ 837 (950)
T 3htx_A 828 K-LLIVSTPNY 837 (950)
T ss_dssp S-EEEEEECBG
T ss_pred C-EEEEEecCc
Confidence 9 777776543
No 184
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.90 E-value=0.0024 Score=58.24 Aligned_cols=75 Identities=5% Similarity=-0.025 Sum_probs=40.7
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Cccc-ccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQ-REYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~-~~~f~~~vpgSF 105 (332)
....+|+|+|||+|..++.+...+ .|..+|+.-|.-. +.-...+. +... ..--+..+-+.+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~----------------~~~~~v~~vD~s~-~~~~~a~~~~~~~~g~~~v~~~~~d~ 171 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYAL----------------NGKGTLTVVERDE-DNLKKAMDNLSEFYDIGNVRTSRSDI 171 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHH----------------TTSSEEEEECSCH-HHHHHHHHHHHTTSCCTTEEEECSCT
T ss_pred CCcCEEEEecCCCCHHHHHHHHHc----------------CCCCEEEEEECCH-HHHHHHHHHHHhcCCCCcEEEEECch
Confidence 445799999999999988775432 0123455555422 11111111 1111 000122344555
Q ss_pred ccCCcCCCceeEEEe
Q 044174 106 HHRLFPQSSIHFAHC 120 (332)
Q Consensus 106 y~~lfP~~svd~~~S 120 (332)
.. .+|++++|++++
T Consensus 172 ~~-~~~~~~fD~Vi~ 185 (275)
T 1yb2_A 172 AD-FISDQMYDAVIA 185 (275)
T ss_dssp TT-CCCSCCEEEEEE
T ss_pred hc-cCcCCCccEEEE
Confidence 54 567889999998
No 185
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.89 E-value=0.0025 Score=60.33 Aligned_cols=101 Identities=12% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCceEEEeecCCCCcchHHHHHH--------------HHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD--------------VLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ 93 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~--------------ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~ 93 (332)
+++.+|+|+|||+|..+..+... +++..++.... ...+.++++..|.-
T Consensus 88 p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~----~~~~rv~v~~~Da~-------------- 149 (317)
T 3gjy_A 88 ASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI----PRAPRVKIRVDDAR-------------- 149 (317)
T ss_dssp GGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC----CCTTTEEEEESCHH--------------
T ss_pred CCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc----cCCCceEEEECcHH--------------
Confidence 45679999999999988877641 22322322111 01233444444321
Q ss_pred ccceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHH
Q 044174 94 REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLN 173 (332)
Q Consensus 94 ~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~ 173 (332)
.|- +-++++++|+|++....|| ..|..+.. ..|++
T Consensus 150 ----------~~l-~~~~~~~fDvIi~D~~~~~--~~~~~L~t--------------------------------~efl~ 184 (317)
T 3gjy_A 150 ----------MVA-ESFTPASRDVIIRDVFAGA--ITPQNFTT--------------------------------VEFFE 184 (317)
T ss_dssp ----------HHH-HTCCTTCEEEEEECCSTTS--CCCGGGSB--------------------------------HHHHH
T ss_pred ----------HHH-hhccCCCCCEEEECCCCcc--ccchhhhH--------------------------------HHHHH
Confidence 111 1135679999999877776 22322211 23666
Q ss_pred HHHHhhccCCeEEEEecc
Q 044174 174 ARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 174 ~Ra~EL~pGG~mvl~~~g 191 (332)
.-.+-|+|||+|++....
T Consensus 185 ~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 185 HCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp HHHHHEEEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEecC
Confidence 667889999999999864
No 186
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.88 E-value=0.0039 Score=56.70 Aligned_cols=74 Identities=18% Similarity=0.114 Sum_probs=41.8
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-~~f~~~vpgSFy 106 (332)
...+|+|+|||+|..++.+++.+ .|..+|+..|.-. +.-...+. +.... .--+..+.+++.
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~----------------~~~~~v~~vD~s~-~~~~~a~~~~~~~~~~~~v~~~~~d~~ 174 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAV----------------GSSGKVFAYEKRE-EFAKLAESNLTKWGLIERVTIKVRDIS 174 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHT----------------TTTCEEEEECCCH-HHHHHHHHHHHHTTCGGGEEEECCCGG
T ss_pred CCCEEEEECCcCCHHHHHHHHHh----------------CCCcEEEEEECCH-HHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 34699999999999988775421 1234566666422 22222221 11100 012334555665
Q ss_pred cCCcCCCceeEEEe
Q 044174 107 HRLFPQSSIHFAHC 120 (332)
Q Consensus 107 ~~lfP~~svd~~~S 120 (332)
.. +|++++|++++
T Consensus 175 ~~-~~~~~~D~V~~ 187 (277)
T 1o54_A 175 EG-FDEKDVDALFL 187 (277)
T ss_dssp GC-CSCCSEEEEEE
T ss_pred Hc-ccCCccCEEEE
Confidence 54 78889999998
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=96.87 E-value=0.0071 Score=57.26 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHH
Q 044174 8 KEKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLF 87 (332)
Q Consensus 8 ~~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf 87 (332)
++.+..++..+.. .....+|+|+|||+|..++.++...- |...|+-.|.-.. .-...
T Consensus 188 ~~~la~~l~~~~~------~~~~~~vLD~gcGsG~~~ie~a~~~~----------------~~~~v~g~Di~~~-~i~~a 244 (354)
T 3tma_A 188 TPVLAQALLRLAD------ARPGMRVLDPFTGSGTIALEAASTLG----------------PTSPVYAGDLDEK-RLGLA 244 (354)
T ss_dssp CHHHHHHHHHHTT------CCTTCCEEESSCTTSHHHHHHHHHHC----------------TTSCEEEEESCHH-HHHHH
T ss_pred CHHHHHHHHHHhC------CCCCCEEEeCCCCcCHHHHHHHHhhC----------------CCceEEEEECCHH-HHHHH
Confidence 4445555544332 23456899999999999988765320 1122222222110 00000
Q ss_pred h-cCcccc-cceeeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHH
Q 044174 88 T-SLPQQR-EYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFA 165 (332)
Q Consensus 88 ~-~l~~~~-~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~ 165 (332)
+ ++.... . .+.-+-+++.+-..|.+++|+++++-..+|.... . .+..
T Consensus 245 ~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~----------------------~--------~~~~ 293 (354)
T 3tma_A 245 REAALASGLS-WIRFLRADARHLPRFFPEVDRILANPPHGLRLGR----------------------K--------EGLF 293 (354)
T ss_dssp HHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEECCCSCC--------------------------C--------HHHH
T ss_pred HHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEECCCCcCccCC----------------------c--------ccHH
Confidence 0 000000 1 2233344555545566778999996555441100 0 1223
Q ss_pred HHHHHHHHHHHHhhccCCeEEEEec
Q 044174 166 KDMENFLNARAEEIVSGGMMVIIMP 190 (332)
Q Consensus 166 ~d~~~fL~~Ra~EL~pGG~mvl~~~ 190 (332)
.....+++.=.+-|+|||++++...
T Consensus 294 ~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 294 HLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp HHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3445677777788999999999864
No 188
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.83 E-value=0.0033 Score=62.63 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=40.0
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccc--cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQR--EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~--~~f~~~vpgSFy 106 (332)
+..+|+|+|||+|..++.++.. +..+|+--|+.. --...+...... .--+..+.|.+.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~------------------~~~~V~gvD~s~--~l~~A~~~~~~~gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA------------------GARKIYAVEAST--MAQHAEVLVKSNNLTDRIVVIPGKVE 217 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT------------------TCSEEEEEECHH--HHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCCEEEEecCcccHHHHHHHHc------------------CCCEEEEEEcHH--HHHHHHHHHHHcCCCCcEEEEECchh
Confidence 3469999999999977655321 123555566532 212222111000 011333445554
Q ss_pred cCCcCCCceeEEEecCccc
Q 044174 107 HRLFPQSSIHFAHCSYALH 125 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alH 125 (332)
+-.+| +++|+++|+..+|
T Consensus 218 ~~~~~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 218 EVSLP-EQVDIIISEPMGY 235 (480)
T ss_dssp TCCCS-SCEEEEECCCCHH
T ss_pred hCccC-CCeEEEEEeCchH
Confidence 43344 5899999976533
No 189
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.80 E-value=0.0068 Score=55.70 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=18.0
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+++.+|+|+|||+|..+..++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~ 94 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREIL 94 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHT
T ss_pred CCCCEEEEECCchHHHHHHHH
Confidence 456899999999999988775
No 190
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.80 E-value=0.0061 Score=53.83 Aligned_cols=83 Identities=16% Similarity=-0.013 Sum_probs=44.3
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccc-cceeeecCCccc
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQR-EYYSAGVPGSFH 106 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~-~~f~~~vpgSFy 106 (332)
...+|+|+|||+|..++.+.+.- .+|+-.|+-..= -...+. +.... .--+..+-+++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-------------------~~v~~vD~s~~~-~~~a~~~~~~~~~~~~~~~~~~d~~ 137 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-------------------MRVIAIDIDPVK-IALARNNAEVYGIADKIEFICGDFL 137 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-------------------CEEEEEESCHHH-HHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CCCEEEECccccCHHHHHHHHcC-------------------CEEEEEECCHHH-HHHHHHHHHHcCCCcCeEEEECChH
Confidence 35799999999999999886420 122222221100 000000 00000 001222333443
Q ss_pred cCCcCCCceeEEEecCccccccCCcc
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPE 132 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~ 132 (332)
.-. |++++|+++++..+||......
T Consensus 138 ~~~-~~~~~D~v~~~~~~~~~~~~~~ 162 (241)
T 3gdh_A 138 LLA-SFLKADVVFLSPPWGGPDYATA 162 (241)
T ss_dssp HHG-GGCCCSEEEECCCCSSGGGGGS
T ss_pred Hhc-ccCCCCEEEECCCcCCcchhhh
Confidence 332 6679999999999999776544
No 191
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.80 E-value=0.0046 Score=54.49 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=17.1
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..++.++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~ 74 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQ 74 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHH
T ss_pred CCEEEEecCCCcHHHHHHHH
Confidence 45999999999999987754
No 192
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.79 E-value=0.0027 Score=59.01 Aligned_cols=21 Identities=14% Similarity=0.186 Sum_probs=17.7
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~ 109 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVL 109 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEcCCcCHHHHHHH
Confidence 445799999999999998775
No 193
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=96.79 E-value=0.0013 Score=57.17 Aligned_cols=22 Identities=14% Similarity=0.045 Sum_probs=18.4
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
.+..+|+|+|||+|.-|..+.+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~ 45 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNS 45 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTT
T ss_pred CCCCEEEEEeecCCHHHHHHHH
Confidence 4468999999999999987754
No 194
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.76 E-value=0.0099 Score=52.02 Aligned_cols=23 Identities=17% Similarity=0.082 Sum_probs=18.7
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
....+|+|+|||+|..++.+.+.
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~ 94 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDI 94 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHH
T ss_pred CCCCEEEEEeccCCHHHHHHHHH
Confidence 34569999999999999887654
No 195
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.74 E-value=0.0058 Score=56.60 Aligned_cols=71 Identities=11% Similarity=0.078 Sum_probs=51.5
Q ss_pred CCceEEEeecCCCCcchHHHH--------------HHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAM--------------QDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQ 93 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~--------------~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~ 93 (332)
+.+-+|+|+|||.|+-|+.++ ...++.+++.....+ ..+.+-+.|++..+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g-----~~~~~~v~D~~~~~----------- 194 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN-----VPHRTNVADLLEDR----------- 194 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT-----CCEEEEECCTTTSC-----------
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC-----CCceEEEeeecccC-----------
Confidence 457799999999999998885 446666666554432 23666666665543
Q ss_pred ccceeeecCCccccCCcCCCceeEEEecCccccccCCc
Q 044174 94 REYYSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVP 131 (332)
Q Consensus 94 ~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P 131 (332)
|....|++.++=++|-|.+..
T Consensus 195 -----------------p~~~~DvaL~lkti~~Le~q~ 215 (281)
T 3lcv_B 195 -----------------LDEPADVTLLLKTLPCLETQQ 215 (281)
T ss_dssp -----------------CCSCCSEEEETTCHHHHHHHS
T ss_pred -----------------CCCCcchHHHHHHHHHhhhhh
Confidence 566899999999999886633
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.67 E-value=0.0059 Score=54.19 Aligned_cols=21 Identities=14% Similarity=0.289 Sum_probs=18.0
Q ss_pred ceEEEeecCCCCcchHHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ 50 (332)
..+|+|+|||+|..++.++..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~ 81 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASA 81 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHH
T ss_pred cCEEEEEeCCCCHHHHHHHHh
Confidence 469999999999999988654
No 197
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=96.66 E-value=0.016 Score=53.13 Aligned_cols=20 Identities=10% Similarity=0.059 Sum_probs=17.5
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
.-+|+|+|||+|..|+.++.
T Consensus 126 ~~~VLDlgcG~G~~~~~la~ 145 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAV 145 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHH
T ss_pred CCEEEEecccCCHHHHHHHH
Confidence 57999999999999988754
No 198
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.64 E-value=0.0098 Score=55.38 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=17.7
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+++-+|+|+|||+|..+..++
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~ 102 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVT 102 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHH
T ss_pred CCCCEEEEEeCChhHHHHHHH
Confidence 556899999999999887764
No 199
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=96.61 E-value=0.028 Score=48.84 Aligned_cols=20 Identities=20% Similarity=0.234 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.+++
T Consensus 59 ~~~vLdiG~G~G~~~~~la~ 78 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLAR 78 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEecCCccHHHHHHHH
Confidence 57999999999999987753
No 200
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=96.54 E-value=0.028 Score=50.30 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~ 83 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMAR 83 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEecCCchHHHHHHHH
Confidence 57999999999999987753
No 201
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=96.53 E-value=0.016 Score=51.78 Aligned_cols=21 Identities=29% Similarity=0.632 Sum_probs=18.2
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
+..+|+|+|||+|..++.++.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~ 69 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSP 69 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHHHH
Confidence 457999999999999988764
No 202
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.53 E-value=0.0098 Score=52.73 Aligned_cols=20 Identities=10% Similarity=0.014 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~ 76 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILN 76 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHH
Confidence 45899999999999988764
No 203
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.47 E-value=0.018 Score=53.74 Aligned_cols=110 Identities=8% Similarity=0.046 Sum_probs=57.9
Q ss_pred CCceEEEeecCCCCcch--HHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcc
Q 044174 28 SNIIRLADLGCAVGSNT--INAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSF 105 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns--~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSF 105 (332)
+...+|+|+|||+|.+. =. .+ +.+.. ++.-+|+-.|+-.. ++ ++-+. +-|++
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs---~~---~a~~~--------~~~~~V~gvDis~~--------v~---~v~~~-i~gD~ 115 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT---AV---LRQWL--------PTGTLLVDSDLNDF--------VS---DADST-LIGDC 115 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH---HH---HHHHS--------CTTCEEEEEESSCC--------BC---SSSEE-EESCG
T ss_pred CCCCEEEEeCCCCCCCCCcHH---HH---HHHHc--------CCCCEEEEEECCCC--------CC---CCEEE-EECcc
Confidence 44679999999774443 11 11 11111 12345666666543 11 11110 44555
Q ss_pred ccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 106 HHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 106 y~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
....++ +++|+|+|+.+.+|.-... .+.. .+ ...+...|+.-.+-|+|||+|
T Consensus 116 ~~~~~~-~~fD~Vvsn~~~~~~g~~~---~d~~-----~~-------------------~~l~~~~l~~a~r~LkpGG~~ 167 (290)
T 2xyq_A 116 ATVHTA-NKWDLIISDMYDPRTKHVT---KEND-----SK-------------------EGFFTYLCGFIKQKLALGGSI 167 (290)
T ss_dssp GGCCCS-SCEEEEEECCCCCC---CC---SCCC-----CC-------------------CTHHHHHHHHHHHHEEEEEEE
T ss_pred ccCCcc-CcccEEEEcCCcccccccc---cccc-----ch-------------------HHHHHHHHHHHHHhcCCCcEE
Confidence 554343 7899999987655521110 0000 00 123345666667889999999
Q ss_pred EEEecc
Q 044174 186 VIIMPG 191 (332)
Q Consensus 186 vl~~~g 191 (332)
++....
T Consensus 168 v~~~~~ 173 (290)
T 2xyq_A 168 AVKITE 173 (290)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 997543
No 204
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.45 E-value=0.029 Score=49.32 Aligned_cols=21 Identities=14% Similarity=0.178 Sum_probs=17.8
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|+|||+|..++.+++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~ 111 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSE 111 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCccHHHHHHHH
Confidence 456999999999999988765
No 205
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.42 E-value=0.013 Score=54.76 Aligned_cols=21 Identities=14% Similarity=0.120 Sum_probs=17.9
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+++-+|+|+|||+|..+..++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~ 114 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVV 114 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHT
T ss_pred CCCCEEEEECCCchHHHHHHH
Confidence 456799999999999998774
No 206
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.39 E-value=0.018 Score=56.20 Aligned_cols=126 Identities=17% Similarity=0.159 Sum_probs=69.2
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|..|+.+++.. +..+|+-.|.-..=...+-+++.... .-+..+.+++..-
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~-----------------~~~~v~a~D~~~~~l~~~~~~~~~~g-~~~~~~~~D~~~~ 307 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVA-----------------PEAQVVAVDIDEQRLSRVYDNLKRLG-MKATVKQGDGRYP 307 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHC-----------------TTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEEECCTTCT
T ss_pred CcCeEEEECCCchHHHHHHHHHc-----------------CCCEEEEECCCHHHHHHHHHHHHHcC-CCeEEEeCchhhc
Confidence 34699999999999998876531 11456666655443333333322111 0012223333322
Q ss_pred C--cCCCceeEEEe---cCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 044174 109 L--FPQSSIHFAHC---SYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGG 183 (332)
Q Consensus 109 l--fP~~svd~~~S---~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG 183 (332)
. ++.+++|.|++ .+.+..+.+.|..... .++..+ ....+....+|+.=.+-|+|||
T Consensus 308 ~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~--------------~~~~~~-----~~l~~~q~~~L~~a~~~LkpGG 368 (429)
T 1sqg_A 308 SQWCGEQQFDRILLDAPCSATGVIRRHPDIKWL--------------RRDRDI-----PELAQLQSEILDAIWPHLKTGG 368 (429)
T ss_dssp HHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHH--------------CCTTHH-----HHHHHHHHHHHHHHGGGEEEEE
T ss_pred hhhcccCCCCEEEEeCCCCcccccCCCcchhhc--------------CCHHHH-----HHHHHHHHHHHHHHHHhcCCCC
Confidence 2 56789999997 3345555555543211 001111 1222333567777778899999
Q ss_pred eEEEEecc
Q 044174 184 MMVIIMPG 191 (332)
Q Consensus 184 ~mvl~~~g 191 (332)
+||.....
T Consensus 369 ~lvystcs 376 (429)
T 1sqg_A 369 TLVYATCS 376 (429)
T ss_dssp EEEEEESC
T ss_pred EEEEEECC
Confidence 99997654
No 207
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.34 E-value=0.016 Score=54.27 Aligned_cols=27 Identities=19% Similarity=0.194 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 165 AKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 165 ~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
.+.-..+|+.=++-|+|||+||+....
T Consensus 222 ~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 222 QGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 344467788878889999999997543
No 208
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.32 E-value=0.013 Score=55.11 Aligned_cols=21 Identities=10% Similarity=-0.024 Sum_probs=17.7
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~ 135 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELC 135 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHT
T ss_pred CCCCEEEEEcCCccHHHHHHH
Confidence 445799999999999998775
No 209
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=96.30 E-value=0.0026 Score=57.07 Aligned_cols=36 Identities=11% Similarity=-0.060 Sum_probs=25.4
Q ss_pred HHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHH
Q 044174 9 EKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 9 ~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
|.....+.+++... +.-+|+|+|||+|..|+.+.+.
T Consensus 67 p~~~~~l~~~l~~~------~~~~VLDiG~GtG~~t~~la~~ 102 (236)
T 2bm8_A 67 PDTQAVYHDMLWEL------RPRTIVELGVYNGGSLAWFRDL 102 (236)
T ss_dssp HHHHHHHHHHHHHH------CCSEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc------CCCEEEEEeCCCCHHHHHHHHh
Confidence 55556666555432 1359999999999999887653
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.21 E-value=0.039 Score=52.22 Aligned_cols=21 Identities=14% Similarity=0.102 Sum_probs=17.7
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la 139 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVA 139 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHT
T ss_pred CCCCEEEEECCCccHHHHHHH
Confidence 456799999999999988764
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.16 E-value=0.011 Score=55.63 Aligned_cols=21 Identities=14% Similarity=0.140 Sum_probs=17.6
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~ 127 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVL 127 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHT
T ss_pred CCCCEEEEEcCCcCHHHHHHH
Confidence 445799999999999988774
No 212
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.11 E-value=0.025 Score=51.99 Aligned_cols=21 Identities=10% Similarity=-0.024 Sum_probs=17.8
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+++.+|+|+|||+|..+..++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~ 97 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELC 97 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHT
T ss_pred CCCCeEEEEeCCcCHHHHHHH
Confidence 456799999999999988774
No 213
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=96.11 E-value=0.0091 Score=54.53 Aligned_cols=27 Identities=7% Similarity=0.148 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 166 KDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 166 ~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
.+...+|+.=++-|+|||+||......
T Consensus 188 ~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 188 LRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp TCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 455677887788899999999986543
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.09 E-value=0.032 Score=51.22 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=17.8
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+.+|+|+|||+|..+..++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~ 94 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVL 94 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHT
T ss_pred CCCCeEEEEcCCcCHHHHHHH
Confidence 445799999999999998775
No 215
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.02 E-value=0.015 Score=50.68 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.++.
T Consensus 65 ~~~vLdiG~G~G~~~~~la~ 84 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGL 84 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEeCCcchHHHHHHHH
Confidence 45999999999999988753
No 216
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.02 E-value=0.035 Score=52.49 Aligned_cols=28 Identities=7% Similarity=0.068 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 165 AKDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 165 ~~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
.+|...+|+.-.+-|+|||.++++....
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 4567778888889999999988887653
No 217
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.01 E-value=0.046 Score=54.33 Aligned_cols=21 Identities=29% Similarity=0.302 Sum_probs=18.3
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|+|||+|.-|+.+++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~ 137 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISA 137 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 457999999999999998765
No 218
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=95.89 E-value=0.049 Score=50.08 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.2
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..++.+..
T Consensus 124 ~~~vLDlG~GsG~~~~~la~ 143 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAK 143 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHH
Confidence 35899999999999988764
No 219
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=95.75 E-value=0.011 Score=53.19 Aligned_cols=20 Identities=15% Similarity=0.267 Sum_probs=17.3
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
.-+|+|+|||+|..|+.++.
T Consensus 61 ~~~VLDiG~G~G~~t~~la~ 80 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSL 80 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHH
T ss_pred cCEEEEeeCCcCHHHHHHHH
Confidence 46999999999999988754
No 220
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=95.73 E-value=0.078 Score=52.00 Aligned_cols=20 Identities=25% Similarity=0.260 Sum_probs=17.5
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|.-|+.+.+
T Consensus 260 g~~VLDlgaG~G~~t~~la~ 279 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAE 279 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHH
T ss_pred cCEEEEeCCCccHHHHHHHH
Confidence 46999999999999988765
No 221
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.71 E-value=0.18 Score=48.22 Aligned_cols=30 Identities=7% Similarity=0.073 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 162 SQFAKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 162 ~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
....+++..++..-.+-|+|||.+++....
T Consensus 298 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 298 ERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 345678888999999999999999988743
No 222
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.71 E-value=0.15 Score=49.22 Aligned_cols=29 Identities=3% Similarity=0.171 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCeEEEEec
Q 044174 162 SQFAKDMENFLNARAEEIVSGGMMVIIMP 190 (332)
Q Consensus 162 ~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~ 190 (332)
....+++..+++.=.+-|+|||++++...
T Consensus 299 ~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 299 PAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 45667888899988899999999995543
No 223
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=95.65 E-value=0.0041 Score=56.91 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=52.1
Q ss_pred CCceEEEeecCCCCcchHHHH-----------HHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccc
Q 044174 28 SNIIRLADLGCAVGSNTINAM-----------QDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREY 96 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~-----------~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~ 96 (332)
+.+-+|+|+|||.|+-++..+ ...++.+++..... .+++.+...|++.-+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~~-------------- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCAP-------------- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTSC--------------
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccCC--------------
Confidence 446799999999999998866 45667666664432 245666666665443
Q ss_pred eeeecCCccccCCcCCCceeEEEecCccccccCCcc
Q 044174 97 YSAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPE 132 (332)
Q Consensus 97 f~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~ 132 (332)
|..+.|++.++=++|-|.+...
T Consensus 165 --------------~~~~~DvvLllk~lh~LE~q~~ 186 (253)
T 3frh_A 165 --------------PAEAGDLALIFKLLPLLEREQA 186 (253)
T ss_dssp --------------CCCBCSEEEEESCHHHHHHHST
T ss_pred --------------CCCCcchHHHHHHHHHhhhhch
Confidence 4449999999999999876543
No 224
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=95.41 E-value=0.16 Score=47.59 Aligned_cols=128 Identities=9% Similarity=0.023 Sum_probs=65.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-CcccccceeeecCCccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREYYSAGVPGSFH 106 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~f~~~vpgSFy 106 (332)
....+|+|.|||+|.-++.+.+.+- +.. ....+++-.|+-..=. .+.+. +... ..-+.-+-|.+.
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~----~~~--------~~~~~v~GiDi~~~~~-~~a~~n~~~~-g~~~~i~~~D~l 194 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLE----LKG--------DVDVHASGVDVDDLLI-SLALVGADLQ-RQKMTLLHQDGL 194 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHH----TTS--------SCEEEEEEEESCHHHH-HHHHHHHHHH-TCCCEEEESCTT
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHH----Hhc--------CCCceEEEEECCHHHH-HHHHHHHHhC-CCCceEEECCCC
Confidence 3568999999999999887765431 110 1235555555421111 11111 0000 001122333433
Q ss_pred cCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHH-HHHHHHHHHhhccCCeE
Q 044174 107 HRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDM-ENFLNARAEEIVSGGMM 185 (332)
Q Consensus 107 ~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~-~~fL~~Ra~EL~pGG~m 185 (332)
.. .+..++|+++++-.+++..... ....-.+...+|.- |. ..|+..=.+-|+|||++
T Consensus 195 ~~-~~~~~fD~Ii~NPPfg~~~~~~--~~~~~~~~~~~g~~-------------------~~~~~~l~~~~~~Lk~gG~~ 252 (344)
T 2f8l_A 195 AN-LLVDPVDVVISDLPVGYYPDDE--NAKTFELCREEGHS-------------------FAHFLFIEQGMRYTKPGGYL 252 (344)
T ss_dssp SC-CCCCCEEEEEEECCCSEESCHH--HHTTSTTCCSSSCE-------------------EHHHHHHHHHHHTEEEEEEE
T ss_pred Cc-cccCCccEEEECCCCCCcCchh--hhhhccccCCCCcc-------------------hHHHHHHHHHHHHhCCCCEE
Confidence 32 3567899999998887754211 11111111112211 11 23666666789999999
Q ss_pred EEEecc
Q 044174 186 VIIMPG 191 (332)
Q Consensus 186 vl~~~g 191 (332)
+++.+.
T Consensus 253 ~~v~p~ 258 (344)
T 2f8l_A 253 FFLVPD 258 (344)
T ss_dssp EEEEEG
T ss_pred EEEECc
Confidence 999854
No 225
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=95.39 E-value=0.014 Score=50.45 Aligned_cols=20 Identities=10% Similarity=-0.052 Sum_probs=16.8
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.++.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~ 76 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFAR 76 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHT
T ss_pred CCEEEEEcCCccHHHHHHHH
Confidence 46899999999999987643
No 226
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=95.37 E-value=0.057 Score=47.99 Aligned_cols=21 Identities=14% Similarity=0.203 Sum_probs=18.0
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
++-+|+|+|||+|..|+.++.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~ 90 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTAL 90 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 356999999999999988865
No 227
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=95.34 E-value=0.033 Score=49.30 Aligned_cols=20 Identities=10% Similarity=0.213 Sum_probs=17.0
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
.-+|+|+|||+|..++.++.
T Consensus 73 ~~~vLdiG~G~G~~~~~la~ 92 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMAL 92 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEecCCCCHHHHHHHH
Confidence 45999999999999988753
No 228
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=95.30 E-value=0.022 Score=51.25 Aligned_cols=21 Identities=14% Similarity=0.227 Sum_probs=17.8
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
+.-+|+|+|||+|..++.++.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~ 99 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATAL 99 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHH
T ss_pred CcCEEEEeCCCcCHHHHHHHH
Confidence 346999999999999988765
No 229
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.30 E-value=0.02 Score=55.07 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 164 FAKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 164 ~~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
..+++..+++.-.+-|+|||.+++....
T Consensus 306 ~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 306 VSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 4567777888888999999999988744
No 230
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.27 E-value=0.23 Score=47.56 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 162 SQFAKDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 162 ~q~~~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
.+..+++..+|..-.+-|+|||.+++....
T Consensus 308 ~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 308 KAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 345678888999999999999999888643
No 231
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=95.21 E-value=0.17 Score=43.81 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=17.1
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..++.++.
T Consensus 70 ~~~vLdiG~G~G~~~~~la~ 89 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALAL 89 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHT
T ss_pred CCEEEEEcCCccHHHHHHHH
Confidence 46999999999999988753
No 232
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.21 E-value=0.14 Score=45.82 Aligned_cols=22 Identities=23% Similarity=0.178 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
++..+|+|+|||+|.-++.++.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~ 35 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVE 35 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHH
Confidence 3457999999999999998863
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.11 E-value=0.096 Score=50.06 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHhhccCCeEEEEecc
Q 044174 167 DMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 167 d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
.+..|+..=.+-|+|||++++..+.
T Consensus 142 ~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 142 LYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3457788778889999999999864
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.01 E-value=0.039 Score=54.72 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=62.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
...+|+|+|||+|.-|+.+++.+- ..-.|+-+|.-..=-..+=+++....-- +..+-++...-
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~----------------~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l 163 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMG----------------GKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRAL 163 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTT----------------TCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHh
Confidence 357999999999999988864310 1123444443222211111111110000 22222332221
Q ss_pred C-cCCCceeEEEec---CccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCe
Q 044174 109 L-FPQSSIHFAHCS---YALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGM 184 (332)
Q Consensus 109 l-fP~~svd~~~S~---~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~ 184 (332)
. +.++++|.|++. ....-+.+.|..... .++..+ ....+.-..+|+.=++-|+|||+
T Consensus 164 ~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~--------------~~~~~~-----~~l~~~Q~~iL~~a~~~LkpGG~ 224 (464)
T 3m6w_A 164 AEAFGTYFHRVLLDAPCSGEGMFRKDREAARH--------------WGPSAP-----KRMAEVQKALLAQASRLLGPGGV 224 (464)
T ss_dssp HHHHCSCEEEEEEECCCCCGGGTTTCTTSGGG--------------CCTTHH-----HHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhccccCCEEEECCCcCCccccccChHHhhh--------------cCHHHH-----HHHHHHHHHHHHHHHHhcCCCcE
Confidence 1 235689999862 223333333432211 011111 22223335678877788999999
Q ss_pred EEEEecc
Q 044174 185 MVIIMPG 191 (332)
Q Consensus 185 mvl~~~g 191 (332)
||.....
T Consensus 225 LvysTCs 231 (464)
T 3m6w_A 225 LVYSTCT 231 (464)
T ss_dssp EEEEESC
T ss_pred EEEEecc
Confidence 9987543
No 235
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=94.89 E-value=0.062 Score=45.85 Aligned_cols=76 Identities=9% Similarity=-0.162 Sum_probs=38.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCcccc
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHH 107 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~ 107 (332)
....+|+|+|||+|..++.+... +.-+|+-.|.-. +.-...+.... -+..+-+++..
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~------------------~~~~v~~vD~~~-~~~~~a~~~~~----~~~~~~~d~~~ 106 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL------------------GAESVTAFDIDP-DAIETAKRNCG----GVNFMVADVSE 106 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT------------------TBSEEEEEESCH-HHHHHHHHHCT----TSEEEECCGGG
T ss_pred CCCCEEEEEeCCccHHHHHHHHc------------------CCCEEEEEECCH-HHHHHHHHhcC----CCEEEECcHHH
Confidence 34579999999999988776432 011233333211 11111111111 12223344443
Q ss_pred CCcCCCceeEEEecCccccccC
Q 044174 108 RLFPQSSIHFAHCSYALHWLSK 129 (332)
Q Consensus 108 ~lfP~~svd~~~S~~alHWLs~ 129 (332)
+| +++|+++++-.+||++.
T Consensus 107 --~~-~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 107 --IS-GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp --CC-CCEEEEEECCCC-----
T ss_pred --CC-CCeeEEEECCCchhccC
Confidence 24 68999999999999754
No 236
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=94.74 E-value=0.097 Score=47.64 Aligned_cols=22 Identities=18% Similarity=0.144 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
.+.-+|+|+|||+|..|+.++.
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~ 139 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAK 139 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHH
T ss_pred CCCCEEEEecCcCCHHHHHHHH
Confidence 3457999999999999998864
No 237
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=94.54 E-value=0.18 Score=52.52 Aligned_cols=29 Identities=10% Similarity=0.167 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 164 FAKDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 164 ~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
..+|...+++.=.+-|+|||++++....+
T Consensus 632 ~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 632 VQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 45677788888889999999999887553
No 238
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=94.51 E-value=0.032 Score=50.75 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
++.-+|+|+|||+|.-++.++.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~ 41 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVK 41 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHH
Confidence 4458999999999999998863
No 239
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=94.31 E-value=0.038 Score=49.84 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=18.6
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
++.-+|+|+|||+|.-++.++.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~ 41 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQ 41 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHH
T ss_pred CCCCEEEEECCchHHHHHHHHH
Confidence 3458999999999999998863
No 240
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=94.26 E-value=0.12 Score=47.42 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=18.2
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
..-+|+|+|||+|..|..+.+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHH
T ss_pred CCCEEEEEcCcccHHHHHHHh
Confidence 456899999999999998874
No 241
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=94.16 E-value=0.14 Score=47.63 Aligned_cols=21 Identities=14% Similarity=0.055 Sum_probs=18.3
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
..-+|+|+|||+|..|..+++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAK 70 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHh
Confidence 356899999999999999875
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=94.08 E-value=0.16 Score=50.30 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=18.5
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...+|+|+|||+|.-|+.+++.
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~ 126 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQ 126 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHH
Confidence 3579999999999999887653
No 243
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=93.88 E-value=0.23 Score=47.33 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHH
Q 044174 8 KEKIVDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 8 ~~~l~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
++.+..++..+. . ....+|+|+|||+|..++.++.
T Consensus 203 ~~~la~~l~~~~-~------~~~~~vLD~gCGsG~~~i~~a~ 237 (373)
T 3tm4_A 203 KASIANAMIELA-E------LDGGSVLDPMCGSGTILIELAL 237 (373)
T ss_dssp CHHHHHHHHHHH-T------CCSCCEEETTCTTCHHHHHHHH
T ss_pred cHHHHHHHHHhh-c------CCCCEEEEccCcCcHHHHHHHH
Confidence 445555554443 1 3346899999999999887753
No 244
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.87 E-value=0.53 Score=43.45 Aligned_cols=21 Identities=33% Similarity=0.368 Sum_probs=17.0
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|||||.|.-|..++.
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~ 94 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAA 94 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHT
T ss_pred CCCEEEEecCCCCHHHHHHHH
Confidence 345899999999999976543
No 245
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=93.82 E-value=0.27 Score=41.79 Aligned_cols=79 Identities=14% Similarity=0.034 Sum_probs=41.7
Q ss_pred CceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcCcccccceeeecCCccccC
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSLPQQREYYSAGVPGSFHHR 108 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l~~~~~~f~~~vpgSFy~~ 108 (332)
+.-+|+|+|||+|..++.+... + . -+|+-.|.-. +.-...+........-+..+-+++..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~------------~----~--~~v~~vD~~~-~~~~~a~~~~~~~~~~~~~~~~d~~~- 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL------------G----A--KEVICVEVDK-EAVDVLIENLGEFKGKFKVFIGDVSE- 108 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT------------T----C--SEEEEEESCH-HHHHHHHHHTGGGTTSEEEEESCGGG-
T ss_pred CcCEEEEeeCCCCHHHHHHHHc------------C----C--CEEEEEECCH-HHHHHHHHHHHHcCCCEEEEECchHH-
Confidence 4569999999999988876432 0 0 1334444311 11111111111001112333444444
Q ss_pred CcCCCceeEEEecCccccccC
Q 044174 109 LFPQSSIHFAHCSYALHWLSK 129 (332)
Q Consensus 109 lfP~~svd~~~S~~alHWLs~ 129 (332)
+| +++|+++++-.+|+.++
T Consensus 109 -~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 109 -FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp -CC-CCCSEEEECCCCSSSST
T ss_pred -cC-CCCCEEEEcCCCccccC
Confidence 23 48999999988888653
No 246
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.71 E-value=0.16 Score=46.11 Aligned_cols=52 Identities=19% Similarity=0.358 Sum_probs=39.7
Q ss_pred CceEEEeecCCCCcchHHHH------------HHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM------------QDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTL 86 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~------------~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~l 86 (332)
..-+|+|+|||+|..|..++ ...++.+++.+.. .+.++++..|...-||..+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~ 92 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSV 92 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGS
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHh
Confidence 35689999999999999987 4456666665432 3469999999998887663
No 247
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=93.42 E-value=0.36 Score=46.24 Aligned_cols=26 Identities=8% Similarity=0.201 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhccCCeEEEEecc
Q 044174 166 KDMENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 166 ~d~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
+++..++..-.+-|+|||.+++....
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 46667788788899999999988743
No 248
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=93.20 E-value=0.46 Score=45.10 Aligned_cols=103 Identities=8% Similarity=-0.023 Sum_probs=56.7
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhc-Ccccccc-eeeecCCcccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTS-LPQQREY-YSAGVPGSFHH 107 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~-l~~~~~~-f~~~vpgSFy~ 107 (332)
..+|+|+| |+|..++.+... .+.-+|+.-|+-. +.-.+.+. +... .. -+..+.|.+..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~-----------------~~~~~v~~vDi~~-~~l~~a~~~~~~~-g~~~v~~~~~D~~~ 232 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLS-----------------GLPKRIAVLDIDE-RLTKFIEKAANEI-GYEDIEIFTFDLRK 232 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHH-----------------TCCSEEEEECSCH-HHHHHHHHHHHHH-TCCCEEEECCCTTS
T ss_pred CCEEEEEC-CCCHHHHHHHHh-----------------CCCCEEEEEECCH-HHHHHHHHHHHHc-CCCCEEEEEChhhh
Confidence 47999999 999999876421 0123455555421 11111111 1100 00 23445555554
Q ss_pred CC--cCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeE
Q 044174 108 RL--FPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVSGGMM 185 (332)
Q Consensus 108 ~l--fP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~pGG~m 185 (332)
.+ .+++++|+|+++..+|+. +...||+.=.+-|+|||++
T Consensus 233 ~l~~~~~~~fD~Vi~~~p~~~~---------------------------------------~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 233 PLPDYALHKFDTFITDPPETLE---------------------------------------AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CCCTTTSSCBSEEEECCCSSHH---------------------------------------HHHHHHHHHHHTBCSTTCE
T ss_pred hchhhccCCccEEEECCCCchH---------------------------------------HHHHHHHHHHHHcccCCeE
Confidence 22 124689999996544431 1256777778899999965
Q ss_pred -EEEecc
Q 044174 186 -VIIMPG 191 (332)
Q Consensus 186 -vl~~~g 191 (332)
++.+..
T Consensus 274 ~~~~~~~ 280 (373)
T 2qm3_A 274 GYFGITR 280 (373)
T ss_dssp EEEEECT
T ss_pred EEEEEec
Confidence 665543
No 249
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=93.10 E-value=0.75 Score=46.31 Aligned_cols=144 Identities=11% Similarity=0.179 Sum_probs=66.8
Q ss_pred ceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHHhcC--cccccceeeecCCcccc
Q 044174 30 IIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLFTSL--PQQREYYSAGVPGSFHH 107 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf~~l--~~~~~~f~~~vpgSFy~ 107 (332)
..+|+|.+||+|.-.+.++..+.+.-........ ......+++-.|+-..=....-.++ .....-+-...+-++..
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~--~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~ 322 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNAS--EQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD 322 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHH--HHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchH--HHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC
Confidence 3599999999998777766554432211100000 0011456666665322111110111 01000111123344556
Q ss_pred CCcCCCceeEEEecCcc---ccccCCccccccCCCCCCCCCc---eeecCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044174 108 RLFPQSSIHFAHCSYAL---HWLSKVPEELLDENSPAWNKGR---IHYTNAAEEVVNAYASQFAKDMENFLNARAEEIVS 181 (332)
Q Consensus 108 ~lfP~~svd~~~S~~al---HWLs~~P~~~~~~~~~~~nkg~---i~~~~~~~~v~~ay~~q~~~d~~~fL~~Ra~EL~p 181 (332)
..++...+|+|.+|=-+ .|-.. .+.. .+.+.-|. .... .++. ...|+ .|+..-.+-|+|
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~---~~~~--d~r~~~g~~~~~~~~-~~~~--------~~~~~-~Fl~~~l~~Lk~ 387 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHE---KLAD--DPRWTINTNGEKRIL-TPPT--------GNANF-AWMLHMLYHLAP 387 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCG---GGTT--CGGGEECCC--CEEC-CCCT--------TCTHH-HHHHHHHHTEEE
T ss_pred cccccccccEEEECCCcCCccccch---hhhh--hhhhhcCcccccccc-cCCC--------cchhH-HHHHHHHHHhcc
Confidence 66788999999996322 25321 1110 00000000 0000 0000 01122 478877888999
Q ss_pred CCeEEEEec
Q 044174 182 GGMMVIIMP 190 (332)
Q Consensus 182 GG~mvl~~~ 190 (332)
||+++++++
T Consensus 388 gGr~aiVlP 396 (544)
T 3khk_A 388 TGSMALLLA 396 (544)
T ss_dssp EEEEEEEEE
T ss_pred CceEEEEec
Confidence 999999985
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=92.97 E-value=0.2 Score=46.29 Aligned_cols=20 Identities=20% Similarity=0.503 Sum_probs=17.4
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
..-+|+|+|||+|..|..+.
T Consensus 42 ~~~~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHT
T ss_pred CcCEEEEEcCcCcHHHHHHH
Confidence 35699999999999998875
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=92.37 E-value=0.19 Score=50.75 Aligned_cols=21 Identities=29% Similarity=0.533 Sum_probs=18.2
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
..+.+|+|+|||.|-.|..+.
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la 85 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLA 85 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHH
Confidence 456899999999999888776
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=91.89 E-value=1.5 Score=42.56 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=18.6
Q ss_pred CceEEEeecCCCCcchHHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
...+|+|.|||+|.-.+.+.+.+
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l 193 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYM 193 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHH
T ss_pred CCCEEeccCCCcchHHHHHHHHH
Confidence 35799999999999887776654
No 253
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=91.86 E-value=0.43 Score=49.11 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=19.0
Q ss_pred CCCceEEEeecCCCCcchHHHHHH
Q 044174 27 ASNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 27 ~~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
..+..+|+|+|||+|+-+...+++
T Consensus 355 ~~~~~vVldVGaGrGpLv~~al~A 378 (637)
T 4gqb_A 355 DTNVQVLMVLGAGRGPLVNASLRA 378 (637)
T ss_dssp TTCEEEEEEESCTTSHHHHHHHHH
T ss_pred cCCCcEEEEECCCCcHHHHHHHHH
Confidence 355689999999999997666554
No 254
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=91.10 E-value=0.61 Score=43.70 Aligned_cols=19 Identities=21% Similarity=0.093 Sum_probs=16.3
Q ss_pred CceEEEeecCCCCcchHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~ 48 (332)
..-+|+|+|||+|..++. +
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a 213 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-C 213 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-T
T ss_pred CCCEEEEccCccCHHHHh-c
Confidence 356999999999999987 5
No 255
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=90.76 E-value=3.7 Score=41.27 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=18.5
Q ss_pred HHHHHHHHhhc-cCCeEEEEecc
Q 044174 170 NFLNARAEEIV-SGGMMVIIMPG 191 (332)
Q Consensus 170 ~fL~~Ra~EL~-pGG~mvl~~~g 191 (332)
.|+..-.+-|+ +||+++++++.
T Consensus 338 ~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 338 AFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp HHHHHHHHTBCTTTCEEEEEEET
T ss_pred HHHHHHHHHhCCCceeEEEEecc
Confidence 47777778899 99999999864
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=89.19 E-value=0.44 Score=43.64 Aligned_cols=47 Identities=13% Similarity=0.210 Sum_probs=30.9
Q ss_pred EEEeecCCCCcchHHHHHH------------HHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHH
Q 044174 32 RLADLGCAVGSNTINAMQD------------VLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNT 85 (332)
Q Consensus 32 ~iaD~GCs~G~ns~~~~~~------------ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~ 85 (332)
+|+|+|||+|..|..+++. .++.+++++. ...++++..|.-.-||..
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEE 107 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGG
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhh
Confidence 9999999999999988753 3333333321 134677777766555543
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=89.06 E-value=0.75 Score=40.97 Aligned_cols=21 Identities=19% Similarity=0.308 Sum_probs=18.2
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
..-+|+|+|||+|..|..+++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEeCCchHHHHHHHH
Confidence 456899999999999998875
No 258
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=88.86 E-value=0.58 Score=43.01 Aligned_cols=28 Identities=21% Similarity=0.465 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCeEEEEec
Q 044174 163 QFAKDMENFLNARAEEIVSGGMMVIIMP 190 (332)
Q Consensus 163 q~~~d~~~fL~~Ra~EL~pGG~mvl~~~ 190 (332)
.+..++..+++.=.+-|+|||.+++...
T Consensus 71 ~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 71 AFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3445566677776788999999999985
No 259
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=88.78 E-value=0.76 Score=41.46 Aligned_cols=51 Identities=14% Similarity=0.219 Sum_probs=32.4
Q ss_pred ceEEEeecCCCCcchHHHHH-------------HHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ-------------DVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLF 87 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~-------------~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf 87 (332)
.-+|+|+|||+|..|. +.. ..++.++++. ...+.++++..|.-.-||..+|
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~------~~~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHP------FLGPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCT------TTGGGEEEECSCGGGCCHHHHH
T ss_pred cCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHh------ccCCceEEEECchhhCCHHHhh
Confidence 4689999999999999 421 1111111111 0124688888888888887655
No 260
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=88.06 E-value=4 Score=37.98 Aligned_cols=22 Identities=32% Similarity=0.407 Sum_probs=18.7
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
.+..+|+|||||.|+-|-.+++
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~ 101 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAA 101 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHT
T ss_pred CCCCEEEEcCCCCCHHHHHHHH
Confidence 4568999999999999977754
No 261
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=87.54 E-value=4.7 Score=42.75 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhhccCCeEEEEecc
Q 044174 168 MENFLNARAEEIVSGGMMVIIMPG 191 (332)
Q Consensus 168 ~~~fL~~Ra~EL~pGG~mvl~~~g 191 (332)
...|+..=.+-|++||++++.++.
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEET
T ss_pred HHHHHHHHHHhcCCCcEEEEEECh
Confidence 456888888889999999999964
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=86.72 E-value=2.1 Score=40.96 Aligned_cols=20 Identities=20% Similarity=-0.017 Sum_probs=17.6
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|.-++.++.
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~ 67 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFAL 67 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHH
Confidence 46899999999999998864
No 263
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=86.53 E-value=3.2 Score=39.84 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|.|||+|.-.+.++.
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHH
Confidence 357899999999998877754
No 264
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=85.68 E-value=4.3 Score=38.74 Aligned_cols=22 Identities=27% Similarity=0.163 Sum_probs=18.0
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...+|+|.|||+|.-.+.++..
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHH
Confidence 3578999999999988887643
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=85.28 E-value=0.76 Score=41.32 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=18.4
Q ss_pred CceEEEeecCCCCcchHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
..-+|+|+|||+|..|..+++.
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~ 52 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH 52 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS
T ss_pred CcCEEEEEcCchHHHHHHHHHc
Confidence 3568999999999999888643
No 266
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=85.27 E-value=0.88 Score=41.73 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=33.4
Q ss_pred CceEEEeecCCCCcchHHHHHHHH----------------HHHHHhhhhcCCCCCCCceEEEecCCCCCchHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQDVL----------------EVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTL 86 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~ii----------------~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~l 86 (332)
..-+|+|+|||+|..|..+++..- +.+++.. .+.++++..|.-.-||..+
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~i~~D~~~~~~~~~ 107 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLELHAGDALTFDFGSI 107 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEEEESCGGGCCGGGG
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEEEECChhcCChhHh
Confidence 356999999999999999876431 2222221 1357777777777776654
No 267
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=84.58 E-value=0.75 Score=40.73 Aligned_cols=23 Identities=13% Similarity=0.123 Sum_probs=19.3
Q ss_pred CCceEEEeecCCCCcchHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ 50 (332)
...-+|+|+|||+|..|..+.+.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~ 50 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKI 50 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHH
T ss_pred CCCCEEEEEeCCCCHHHHHHHHh
Confidence 34579999999999999988654
No 268
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=84.19 E-value=3.7 Score=39.33 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=17.4
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
..-.|+|.+||+|.-.+.++.
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHH
Confidence 347899999999998887764
No 269
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=83.44 E-value=2.1 Score=42.96 Aligned_cols=23 Identities=17% Similarity=0.008 Sum_probs=18.8
Q ss_pred CceEEEeecCCCCcchHHHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
...+|+|.+||+|.-.+.+...+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l 191 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYV 191 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHH
T ss_pred CCCeEecCCcccchHHHHHHHHH
Confidence 35799999999999887776654
No 270
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=82.17 E-value=4.5 Score=39.06 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=18.0
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
+.-+|+|+|||+|..++.+..
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~ 306 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLAT 306 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHT
T ss_pred CCCEEEECCCCCCHHHHHHHh
Confidence 346899999999999998873
No 271
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=79.75 E-value=1.2 Score=40.46 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=20.9
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
.+.++|+|+|||+|-|++.+++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~ 82 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAF 82 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHH
Confidence 457999999999999999987754
No 272
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=77.36 E-value=2.2 Score=35.78 Aligned_cols=34 Identities=9% Similarity=0.069 Sum_probs=23.7
Q ss_pred HHHHHHhhhhcccCCCCCceEEEeecCCCCc-chHHHHH
Q 044174 12 VDAITRNLNVCELSSASNIIRLADLGCAVGS-NTINAMQ 49 (332)
Q Consensus 12 ~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~-ns~~~~~ 49 (332)
.+.|.+.+... ....-+|+|+|||.|. |+..+.+
T Consensus 22 ~e~LaeYI~~~----~~~~~rVlEVG~G~g~~vA~~La~ 56 (153)
T 2k4m_A 22 WNDLAVYIIRC----SGPGTRVVEVGAGRFLYVSDYIRK 56 (153)
T ss_dssp HHHHHHHHHHH----SCSSSEEEEETCTTCCHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCCCcEEEEccCCChHHHHHHHH
Confidence 66666665432 2335799999999995 8877643
No 273
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=77.27 E-value=2.9 Score=43.57 Aligned_cols=39 Identities=13% Similarity=0.104 Sum_probs=24.2
Q ss_pred HHHHHHhhhhcccCCCCCceEEEeecCCCCcchHHHHHHH
Q 044174 12 VDAITRNLNVCELSSASNIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 12 ~~ai~~~~~~~~~~~~~~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
++||...+... +....+..+|+|+|||+|+-+...+.+.
T Consensus 393 ~~AI~~al~d~-~~~~~~~~VVldVGaGtGpLs~~al~A~ 431 (745)
T 3ua3_A 393 GEAVVGALKDL-GADGRKTVVIYLLGGGRGPIGTKILKSE 431 (745)
T ss_dssp HHHHHHHHHHH-HTTCCSEEEEEEESCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHh-hcccCCCcEEEEECCCCCHHHHHHHHHH
Confidence 45565554321 1111346899999999999987655443
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=76.77 E-value=1.5 Score=40.66 Aligned_cols=21 Identities=10% Similarity=0.101 Sum_probs=18.3
Q ss_pred ceEEEeecCCCCcchHHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ 50 (332)
.-+|+|+|||+|..|+.+++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~ 47 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEH 47 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHH
T ss_pred CCEEEEEeCCcCHHHHHHHHH
Confidence 469999999999999988754
No 275
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=76.23 E-value=7.6 Score=37.24 Aligned_cols=92 Identities=15% Similarity=0.074 Sum_probs=54.0
Q ss_pred HHHHHHHHHhhhhcccC-CCCCceEEEeecCCCCcchHHHHHHHHHHHHHhhhhcCCCCCCCceEEEecCCCCCchHHHH
Q 044174 9 EKIVDAITRNLNVCELS-SASNIIRLADLGCAVGSNTINAMQDVLEVIKNKCHSQCPSSKLPEFQVFFNDKTSNDFNTLF 87 (332)
Q Consensus 9 ~~l~~ai~~~~~~~~~~-~~~~~~~iaD~GCs~G~ns~~~~~~ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~NDFn~lf 87 (332)
=.|+||+.......... ......+++|||||.|+=|-.+++. + ..|+=-|.-.-|-. .
T Consensus 190 lKL~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r------------g-------~~V~aVD~~~l~~~--l 248 (375)
T 4auk_A 190 LKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR------------N-------MWVYSVDNGPMAQS--L 248 (375)
T ss_dssp HHHHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT------------T-------CEEEEECSSCCCHH--H
T ss_pred HHHHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC------------C-------CEEEEEEhhhcChh--h
Confidence 34888886653211000 0244689999999999999776542 1 24666664222211 1
Q ss_pred hcCcccccceeeecCCccccCCcCCCceeEEEecCcccc
Q 044174 88 TSLPQQREYYSAGVPGSFHHRLFPQSSIHFAHCSYALHW 126 (332)
Q Consensus 88 ~~l~~~~~~f~~~vpgSFy~~lfP~~svd~~~S~~alHW 126 (332)
...+ -+.-+-++.+....+.+.+|.++|=.+.+|
T Consensus 249 ~~~~-----~V~~~~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 249 MDTG-----QVTWLREDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp HTTT-----CEEEECSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred ccCC-----CeEEEeCccccccCCCCCcCEEEEcCCCCh
Confidence 1111 233456677777777789999999665544
No 276
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=72.29 E-value=5.5 Score=36.44 Aligned_cols=21 Identities=10% Similarity=0.067 Sum_probs=17.9
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
.+.-+|+|+|||+|+.|+.++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a 144 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIA 144 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHH
T ss_pred CCCCEEEEecCcCcHHHHHHH
Confidence 345799999999999998875
No 277
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=72.21 E-value=3.7 Score=39.80 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=31.5
Q ss_pred ceEEEeecCCCCcchHHHH------------HHHHHHHHHhhhhc--CCCCCCCceEEEecCCC
Q 044174 30 IIRLADLGCAVGSNTINAM------------QDVLEVIKNKCHSQ--CPSSKLPEFQVFFNDKT 79 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~------------~~ii~~i~~~~~~~--~~~~~~~~~~v~~nDlp 79 (332)
.-+|+|+|||+|..++.+. ...++..++..... + ...++++..|..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~g----l~~i~~i~~Da~ 153 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNE----GKDVNILTGDFK 153 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCT----TCEEEEEESCGG
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccC----CCcEEEEECcHH
Confidence 4789999999999998876 33556555554432 2 135777777764
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=71.20 E-value=4.7 Score=37.18 Aligned_cols=21 Identities=29% Similarity=0.374 Sum_probs=17.1
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|||||.|.-|..++.
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~ 110 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAAS 110 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHH
Confidence 346999999999999976653
No 279
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=70.67 E-value=1.5 Score=39.67 Aligned_cols=20 Identities=10% Similarity=0.096 Sum_probs=17.4
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|+|||+|..|+.+..
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~ 103 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLAS 103 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHH
Confidence 46899999999999998864
No 280
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=66.56 E-value=13 Score=34.79 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=16.2
Q ss_pred eEEEeecCCCCcchHHHH
Q 044174 31 IRLADLGCAVGSNTINAM 48 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~ 48 (332)
-+|+|+|||+|..|+.+.
T Consensus 215 ~~vLDl~cG~G~~~l~la 232 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALA 232 (369)
T ss_dssp SEEEEESCTTSHHHHHHG
T ss_pred CEEEEccCCCCHHHHHHH
Confidence 579999999999999776
No 281
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=64.82 E-value=3.4 Score=37.28 Aligned_cols=21 Identities=0% Similarity=-0.220 Sum_probs=16.8
Q ss_pred CCceEEEeecCCCCcchHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~ 48 (332)
+.+-+|+|+|||+|..+..++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll 91 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLF 91 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHT
T ss_pred CCCCEEEEEeCCcCHHHHHHH
Confidence 445799999999998876654
No 282
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=63.06 E-value=5.2 Score=36.36 Aligned_cols=18 Identities=33% Similarity=0.503 Sum_probs=15.3
Q ss_pred ceEEEeecCCCCcchHHH
Q 044174 30 IIRLADLGCAVGSNTINA 47 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~ 47 (332)
..+|+|||||.|..|..+
T Consensus 79 g~~VvDLGaapGGWSq~~ 96 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYC 96 (267)
T ss_dssp CEEEEEESCTTSHHHHHH
T ss_pred CCEEEEcCCCCCcHHHHH
Confidence 459999999999999644
No 283
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=62.64 E-value=4.5 Score=37.85 Aligned_cols=18 Identities=28% Similarity=0.514 Sum_probs=15.1
Q ss_pred ceEEEeecCCCCcchHHH
Q 044174 30 IIRLADLGCAVGSNTINA 47 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~ 47 (332)
..+|+|||||.|..|..+
T Consensus 95 ~~~VlDLGaapGGwsq~~ 112 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYM 112 (321)
T ss_dssp CEEEEEETCTTCHHHHHH
T ss_pred CCEEEEeCCCCCcHHHHH
Confidence 359999999999999643
No 284
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=60.67 E-value=4 Score=39.59 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=17.3
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
.-+|+|+|||+|..++.+..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~ 310 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAK 310 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHH
T ss_pred CCEEEEeeccchHHHHHHHH
Confidence 46899999999999998763
No 285
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=60.11 E-value=14 Score=32.85 Aligned_cols=21 Identities=10% Similarity=0.260 Sum_probs=14.7
Q ss_pred HHHHHHHHHhhccCCeEEEEe
Q 044174 169 ENFLNARAEEIVSGGMMVIIM 189 (332)
Q Consensus 169 ~~fL~~Ra~EL~pGG~mvl~~ 189 (332)
...|+.=.+-|+|||.+++..
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCeEEEEEc
Confidence 344444456799999999876
No 286
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=57.21 E-value=5 Score=36.29 Aligned_cols=19 Identities=11% Similarity=0.186 Sum_probs=17.5
Q ss_pred eEEEeecCCCCcchHHHHH
Q 044174 31 IRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 31 ~~iaD~GCs~G~ns~~~~~ 49 (332)
.+|+|+|||.|..|+.+++
T Consensus 90 ~~VLDl~~G~G~dal~lA~ 108 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS 108 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHH
Confidence 7899999999999999875
No 287
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=56.74 E-value=17 Score=33.42 Aligned_cols=21 Identities=19% Similarity=0.034 Sum_probs=18.2
Q ss_pred ceEEEeecCCCCcchHHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ 50 (332)
.-+|+|+|||+|.-|+.+++.
T Consensus 103 g~~VLDlcaG~G~kt~~la~~ 123 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAAL 123 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHH
Confidence 469999999999999987653
No 288
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=55.80 E-value=7.9 Score=35.21 Aligned_cols=19 Identities=21% Similarity=0.024 Sum_probs=16.4
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
.-+|+|++||+|..++.++
T Consensus 236 ~~~vlD~f~GsGt~~~~a~ 254 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAA 254 (297)
T ss_dssp TCEEEETTCTTTHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4589999999999888776
No 289
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=51.35 E-value=1.2e+02 Score=27.71 Aligned_cols=22 Identities=9% Similarity=0.040 Sum_probs=18.5
Q ss_pred CCCceEEEeecCCCCcchHHHH
Q 044174 27 ASNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 27 ~~~~~~iaD~GCs~G~ns~~~~ 48 (332)
.+++-+|+=+|-|.|..+-.++
T Consensus 81 ~p~pk~VLIiGgGdG~~~revl 102 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVT 102 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHH
T ss_pred CCCCCeEEEECCCchHHHHHHH
Confidence 4667899999999999887776
No 290
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=49.96 E-value=27 Score=32.14 Aligned_cols=30 Identities=13% Similarity=0.286 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHhhccCCeEEEEeccc
Q 044174 163 QFAKDMENFLNARAEEIVSGGMMVIIMPGI 192 (332)
Q Consensus 163 q~~~d~~~fL~~Ra~EL~pGG~mvl~~~gr 192 (332)
.+...+...|+.=.+-|+|||.+++...-+
T Consensus 58 ~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 58 EYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 334455556665567799999999998643
No 291
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=47.30 E-value=7.2 Score=35.66 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=17.9
Q ss_pred CCceEEEeecCCCCcchHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~ 49 (332)
....+|+|||||.|.=|..+++
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~ 93 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAAT 93 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTT
T ss_pred CCCCEEEEcCCCCCHHHHHHhh
Confidence 4479999999999998866543
No 292
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=45.66 E-value=17 Score=33.60 Aligned_cols=22 Identities=14% Similarity=0.237 Sum_probs=15.4
Q ss_pred HHHHHHHHHhhccCCeEEEEec
Q 044174 169 ENFLNARAEEIVSGGMMVIIMP 190 (332)
Q Consensus 169 ~~fL~~Ra~EL~pGG~mvl~~~ 190 (332)
...|..-.+-|+|||.+++...
T Consensus 86 ~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 86 KRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEcC
Confidence 3344444566999999999864
No 293
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=42.39 E-value=18 Score=33.70 Aligned_cols=24 Identities=29% Similarity=0.580 Sum_probs=20.4
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
...++|+|+|=|+|-|++..+...
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~ 118 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHL 118 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCccHHHHHHHHHH
Confidence 557999999999999998876654
No 294
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=33.51 E-value=20 Score=34.07 Aligned_cols=22 Identities=14% Similarity=-0.029 Sum_probs=18.8
Q ss_pred CCCceEEEeecCCCCcchHHHH
Q 044174 27 ASNIIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 27 ~~~~~~iaD~GCs~G~ns~~~~ 48 (332)
.+++-+|+|+|||+|..+..++
T Consensus 186 ~p~pkrVL~IGgG~G~~arell 207 (364)
T 2qfm_A 186 DYTGKDVLILGGGDGGILCEIV 207 (364)
T ss_dssp CCTTCEEEEEECTTCHHHHHHH
T ss_pred CCCCCEEEEEECChhHHHHHHH
Confidence 4678899999999999888765
No 295
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=30.58 E-value=27 Score=35.56 Aligned_cols=24 Identities=21% Similarity=0.296 Sum_probs=21.3
Q ss_pred CCceEEEeecCCCCcchHHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~i 51 (332)
.+.++|+|+|.|+|-|.+..++..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~ 80 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDF 80 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHH
T ss_pred CCceEEEEecCchHHHHHHHHHHH
Confidence 467999999999999999998763
No 296
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=28.70 E-value=27 Score=33.43 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=18.0
Q ss_pred ceEEEeecCCCCcchHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~ 49 (332)
..+|+|++||+|.-++.+++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~ 72 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLL 72 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHH
Confidence 47999999999999998875
No 297
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=28.28 E-value=1.8e+02 Score=26.08 Aligned_cols=118 Identities=14% Similarity=0.197 Sum_probs=60.8
Q ss_pred eeecCCccccCCcCCCceeEEEecCccccccCCccccccCCCCCCCCCceeecCCCHHHHHHHHHHH---HHHHHHHHHH
Q 044174 98 SAGVPGSFHHRLFPQSSIHFAHCSYALHWLSKVPEELLDENSPAWNKGRIHYTNAAEEVVNAYASQF---AKDMENFLNA 174 (332)
Q Consensus 98 ~~~vpgSFy~~lfP~~svd~~~S~~alHWLs~~P~~~~~~~~~~~nkg~i~~~~~~~~v~~ay~~q~---~~d~~~fL~~ 174 (332)
+.-+-+|||...-|. +.-.|..++|+.. .++-+.+..+...-.... ...|..|++
T Consensus 52 tVEiNsTFY~~p~~~---------t~~~W~~~tP~~F------------~F~vKa~r~iTh~~~~~~~~~~~~~~~F~~- 109 (273)
T 1vpq_A 52 IVELNFTYYTQPSWR---------SFVQMLRKTPPDF------------YFTVKTPGSVTHVLWKEGKDPKEDMENFTR- 109 (273)
T ss_dssp EEEECCCSSSSSCHH---------HHHHHHTTSCTTC------------EEEEECCHHHHHTHHHHTCCSHHHHHHHHH-
T ss_pred eEEECccccCCCCHH---------HHHHHHHhCCCCe------------EEEEEeChhhcccccccccchHHHHHHHHH-
Confidence 344567777643333 3346999998764 233333332222111222 456899997
Q ss_pred HHHhhccCCeEEEEecccCCCCCCCCcchhHHHHHHHHHHHHHHHh-hccchhhhcccCcC-cccCCHHHHHHHHHhCC
Q 044174 175 RAEEIVSGGMMVIIMPGIPYGMPYSHLTNGVMYDLMATIFMELANE-QLITEAELDSFNLP-IYSASSEEMVKLVDKNG 251 (332)
Q Consensus 175 Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~l~~al~~mv~e-Gli~~e~~d~fn~P-~y~ps~~E~~~~ie~~G 251 (332)
..+.|+.||++=..+.--+-.-..+ . +.+.. |..+... |+ .-.-.|..| ||.+ ++.+++++.|
T Consensus 110 ~~~pL~~~~kLG~vL~Q~Ppsf~~~---~----~~~~~-L~~l~~~l~~---~~AvE~Rh~sW~~~---~~~~lL~~~~ 174 (273)
T 1vpq_A 110 QIEPLIEEQRLKMTLAQFPFSFKFS---R----KNVEY-LEKLRESYPY---ELAVEFRHYSWDRE---ETYEFLRNHG 174 (273)
T ss_dssp HHHHHHHTTCEEEEEEECCTTCCCC---H----HHHHH-HHHHHHHCCS---CEEEECCBGGGCSH---HHHHHHHHHT
T ss_pred HHHhhccCCCEEEEEEEcCCCCCCC---H----HHHHH-HHHHHHHcCC---CEEEEccCchhccH---HHHHHHHHcC
Confidence 5778876776654444333221111 1 22333 3333222 32 111256666 5544 8999999988
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=28.02 E-value=38 Score=31.11 Aligned_cols=21 Identities=5% Similarity=-0.135 Sum_probs=18.3
Q ss_pred ceEEEeecCCCCcchHHHHHH
Q 044174 30 IIRLADLGCAVGSNTINAMQD 50 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~~~ 50 (332)
.-+++|.+||.|+-|..+++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~ 43 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER 43 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT
T ss_pred CCEEEEeCCCCcHHHHHHHHC
Confidence 458999999999999998864
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=27.35 E-value=46 Score=29.35 Aligned_cols=19 Identities=21% Similarity=0.009 Sum_probs=16.0
Q ss_pred ceEEEeecCCCCcchHHHH
Q 044174 30 IIRLADLGCAVGSNTINAM 48 (332)
Q Consensus 30 ~~~iaD~GCs~G~ns~~~~ 48 (332)
.-.|+|..||+|..++.++
T Consensus 213 ~~~vlD~f~GsGtt~~~a~ 231 (260)
T 1g60_A 213 NDLVLDCFMGSGTTAIVAK 231 (260)
T ss_dssp TCEEEESSCTTCHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHH
Confidence 4689999999998887765
No 300
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=26.62 E-value=47 Score=24.50 Aligned_cols=30 Identities=33% Similarity=0.748 Sum_probs=25.1
Q ss_pred cccCcCcccCCHHHHHHHHH----hCCceEEeEEE
Q 044174 229 DSFNLPIYSASSEEMVKLVD----KNGHFSIKTVE 259 (332)
Q Consensus 229 d~fn~P~y~ps~~E~~~~ie----~~G~F~I~~le 259 (332)
.+|-.|.|..|++|-...-| +.| |.|.++.
T Consensus 45 ~s~EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVR 78 (84)
T 2lmc_A 45 HSFEVPIYAETLDEALELAEWQYVPAG-FEVTRVR 78 (84)
T ss_dssp CEEEEEECCSSHHHHHHHHHHTTGGGT-CEEEEEE
T ss_pred ceEEEeeecccHHHHHHHHHHHhhhcc-ceEEEec
Confidence 46779999999999888876 458 9999886
No 301
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=25.89 E-value=25 Score=26.86 Aligned_cols=19 Identities=26% Similarity=0.683 Sum_probs=15.9
Q ss_pred EEeecCCCCcchHHHHHHH
Q 044174 33 LADLGCAVGSNTINAMQDV 51 (332)
Q Consensus 33 iaD~GCs~G~ns~~~~~~i 51 (332)
.-++||+.|+|.+.++..+
T Consensus 59 ~~Cf~cg~gGd~i~fv~~~ 77 (103)
T 1d0q_A 59 FHCFGCGAGGNAFTFLMDI 77 (103)
T ss_dssp EEETTTCCEECHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHH
Confidence 4589999999999998653
No 302
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=23.57 E-value=42 Score=33.92 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=21.8
Q ss_pred CCceEEEeecCCCCcchHHHHHHHH
Q 044174 28 SNIIRLADLGCAVGSNTINAMQDVL 52 (332)
Q Consensus 28 ~~~~~iaD~GCs~G~ns~~~~~~ii 52 (332)
.+.++|+|+|-|+|-|.+..++...
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~ 89 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFD 89 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHHH
Confidence 4679999999999999999987643
No 303
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=23.09 E-value=44 Score=34.42 Aligned_cols=21 Identities=29% Similarity=0.243 Sum_probs=17.3
Q ss_pred CceEEEeecCCCCcchHHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQ 49 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~ 49 (332)
...+|+|.+||+|.-.+.++.
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~ 210 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAM 210 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHH
Confidence 346899999999998887754
No 304
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=20.96 E-value=46 Score=24.96 Aligned_cols=42 Identities=2% Similarity=0.094 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhhccchh----hhcccCcCcccCCHHHHHHHHHh
Q 044174 208 DLMATIFMELANEQLITEA----ELDSFNLPIYSASSEEMVKLVDK 249 (332)
Q Consensus 208 ~~l~~al~~mv~eGli~~e----~~d~fn~P~y~ps~~E~~~~ie~ 249 (332)
..+..++..|.++|+|... .-..+....|..+.+++...++.
T Consensus 48 ~tV~~~L~~L~~~GlV~~~~~~~~~~g~~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 48 NDVRKKLNLLEEQGFVSYRKTRDKDSGWFIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEC---CCCCEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHCCCEEEEecccCCCceEEEEeecCHHHHHHHHHH
Confidence 4789999999999999865 22233333447788888777653
No 305
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=20.73 E-value=57 Score=28.17 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhhccchhhhcccCcCcccCCHHHHHHHHHh
Q 044174 206 MYDLMATIFMELANEQLITEAELDSFNLPIYSASSEEMVKLVDK 249 (332)
Q Consensus 206 ~~~~l~~al~~mv~eGli~~e~~d~fn~P~y~ps~~E~~~~ie~ 249 (332)
.|+-+-+-++.|+++|.|+++..+ .-.+..+++|+-+.|++
T Consensus 158 fw~~l~~~l~~~~~~Gfi~~~~~~---~i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 158 HYDGLLTWLRGLVPTGYVSQRAMD---SLVVVDNVEAALEACAP 198 (199)
T ss_dssp TTHHHHHHHHHTTTTTSSCHHHHH---TSEEESSHHHHHHHHSC
T ss_pred cchHHHHHHHHHHHCCCCCHHHCC---eEEEeCCHHHHHHHHhc
Confidence 467777777899999999988765 45678999999888875
No 306
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=20.21 E-value=2.9e+02 Score=25.73 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=36.1
Q ss_pred CceEEEeecCCCCcchHHHHHH--------------HHHHHHHhhhhcCCCCCCCceEEEecCCCCCc-hHHHH
Q 044174 29 NIIRLADLGCAVGSNTINAMQD--------------VLEVIKNKCHSQCPSSKLPEFQVFFNDKTSND-FNTLF 87 (332)
Q Consensus 29 ~~~~iaD~GCs~G~ns~~~~~~--------------ii~~i~~~~~~~~~~~~~~~~~v~~nDlp~ND-Fn~lf 87 (332)
+..+|+|+|.|.|.-|..+++. .+..+++.. . .+.++++..|--.-| ++.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~~~~~~l~ 124 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDWSTYSNLI 124 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCHHHHHHHT
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccchhhHHHhh
Confidence 3579999999999999999864 345555543 1 246999999984433 44444
Done!