Query 044175
Match_columns 537
No_of_seqs 199 out of 2129
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 12:09:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044175.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044175hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 2.2E-48 4.7E-53 407.9 40.0 518 10-537 32-563 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.2E-42 2.6E-47 346.3 26.1 460 9-534 15-487 (498)
3 PRK10207 dipeptide/tripeptide 100.0 4.7E-38 1E-42 330.4 40.3 458 9-535 8-477 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 1.3E-36 2.9E-41 319.2 39.5 451 10-535 5-469 (475)
5 PRK15462 dipeptide/tripeptide 100.0 6.6E-36 1.4E-40 309.4 39.7 417 12-487 6-437 (493)
6 PRK09584 tppB putative tripept 100.0 6.8E-35 1.5E-39 308.0 38.7 452 12-534 18-479 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 1.9E-30 4E-35 277.7 39.6 438 29-537 1-654 (654)
8 PRK12382 putative transporter; 99.9 1.6E-23 3.4E-28 215.8 34.9 384 7-536 7-391 (392)
9 PRK11646 multidrug resistance 99.9 1.6E-23 3.5E-28 216.0 31.6 172 11-211 8-179 (400)
10 PRK03545 putative arabinose tr 99.9 2.4E-23 5.3E-28 214.2 31.8 374 13-535 7-381 (390)
11 PRK05122 major facilitator sup 99.9 8.2E-23 1.8E-27 211.0 35.2 378 13-536 13-391 (399)
12 PRK10054 putative transporter; 99.9 1.5E-23 3.3E-28 215.9 29.1 175 12-213 4-178 (395)
13 PRK11551 putative 3-hydroxyphe 99.9 7E-23 1.5E-27 211.9 33.7 174 11-211 11-184 (406)
14 PRK14995 methyl viologen resis 99.9 5.1E-23 1.1E-27 218.2 30.3 398 14-489 5-412 (495)
15 PF00854 PTR2: POT family; In 99.9 1.5E-24 3.2E-29 221.4 16.0 365 82-473 1-369 (372)
16 TIGR00893 2A0114 d-galactonate 99.9 2.2E-22 4.7E-27 206.4 29.9 154 36-215 14-167 (399)
17 TIGR01299 synapt_SV2 synaptic 99.9 1.2E-21 2.6E-26 212.6 36.1 155 35-215 186-353 (742)
18 TIGR00903 2A0129 major facilit 99.9 8.8E-22 1.9E-26 200.2 32.2 153 36-215 11-163 (368)
19 PRK10504 putative transporter; 99.9 1E-21 2.2E-26 207.4 33.5 179 13-218 8-186 (471)
20 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1E-21 2.2E-26 203.4 32.7 177 12-215 5-187 (412)
21 PRK11663 regulatory protein Uh 99.9 6.8E-22 1.5E-26 206.3 31.1 164 19-209 27-190 (434)
22 TIGR00900 2A0121 H+ Antiporter 99.9 4.4E-22 9.5E-27 202.2 29.0 358 19-488 3-361 (365)
23 PF07690 MFS_1: Major Facilita 99.9 3.1E-22 6.7E-27 202.4 26.9 166 21-212 2-167 (352)
24 PRK09874 drug efflux system pr 99.9 9.3E-22 2E-26 203.6 30.2 385 12-536 10-400 (408)
25 TIGR00891 2A0112 putative sial 99.9 9.1E-22 2E-26 203.1 30.0 175 8-209 5-181 (405)
26 PRK10213 nepI ribonucleoside t 99.9 2.4E-21 5.1E-26 199.5 32.6 174 10-210 15-188 (394)
27 PRK15402 multidrug efflux syst 99.9 4.6E-21 9.9E-26 198.4 34.1 174 13-213 8-184 (406)
28 PRK10489 enterobactin exporter 99.9 1.6E-21 3.5E-26 202.5 30.4 356 16-489 18-373 (417)
29 TIGR00711 efflux_EmrB drug res 99.9 8E-22 1.7E-26 208.9 28.2 396 17-488 4-408 (485)
30 PRK10406 alpha-ketoglutarate t 99.9 5.5E-21 1.2E-25 199.4 33.9 170 20-208 27-210 (432)
31 TIGR00894 2A0114euk Na(+)-depe 99.9 8.4E-22 1.8E-26 207.6 28.0 148 45-216 70-218 (465)
32 TIGR00890 2A0111 Oxalate/Forma 99.9 6.4E-22 1.4E-26 201.8 25.6 155 31-213 19-173 (377)
33 TIGR00710 efflux_Bcr_CflA drug 99.9 4.1E-21 8.9E-26 197.0 31.5 177 12-215 2-178 (385)
34 COG2814 AraJ Arabinose efflux 99.9 8.9E-21 1.9E-25 188.2 31.8 182 10-218 8-189 (394)
35 PRK09705 cynX putative cyanate 99.9 5.9E-21 1.3E-25 196.6 31.9 157 23-207 17-174 (393)
36 cd06174 MFS The Major Facilita 99.9 4.4E-21 9.5E-26 193.5 30.1 346 18-531 2-349 (352)
37 TIGR00899 2A0120 sugar efflux 99.9 9.2E-21 2E-25 193.7 32.8 168 21-214 3-173 (375)
38 PRK10642 proline/glycine betai 99.9 2.1E-20 4.6E-25 198.0 35.6 175 14-207 15-203 (490)
39 PRK12307 putative sialic acid 99.9 5.3E-21 1.1E-25 199.2 30.2 166 12-204 15-180 (426)
40 TIGR00895 2A0115 benzoate tran 99.9 7.5E-21 1.6E-25 195.5 30.6 171 13-210 15-185 (398)
41 PRK09952 shikimate transporter 99.9 2E-20 4.2E-25 195.5 33.3 175 13-206 20-209 (438)
42 PRK10091 MFS transport protein 99.9 1.8E-20 4E-25 192.2 32.5 172 14-212 2-173 (382)
43 PRK03633 putative MFS family t 99.9 2.1E-20 4.6E-25 191.8 32.7 160 13-199 4-163 (381)
44 PRK15011 sugar efflux transpor 99.9 3.2E-20 7E-25 191.2 34.0 190 1-215 1-192 (393)
45 PRK11273 glpT sn-glycerol-3-ph 99.9 1.9E-20 4.2E-25 196.4 32.7 171 19-212 29-203 (452)
46 PRK11195 lysophospholipid tran 99.9 3.4E-20 7.3E-25 190.9 33.6 164 15-209 3-166 (393)
47 COG2271 UhpC Sugar phosphate p 99.9 1.4E-21 3E-26 191.3 21.7 178 13-216 23-205 (448)
48 PRK10077 xylE D-xylose transpo 99.9 1.2E-20 2.7E-25 199.5 30.9 154 46-214 50-212 (479)
49 PRK03699 putative transporter; 99.9 5.4E-20 1.2E-24 189.6 34.7 174 12-212 4-178 (394)
50 TIGR00887 2A0109 phosphate:H+ 99.9 4.4E-20 9.6E-25 196.3 34.6 178 15-213 16-221 (502)
51 PRK09556 uhpT sugar phosphate 99.9 7.5E-21 1.6E-25 200.4 27.2 155 39-214 52-209 (467)
52 TIGR00897 2A0118 polyol permea 99.9 1.7E-19 3.6E-24 186.5 35.9 170 12-204 10-180 (402)
53 PRK15403 multidrug efflux syst 99.9 1.8E-19 3.8E-24 186.7 35.1 146 42-213 42-187 (413)
54 TIGR00898 2A0119 cation transp 99.9 3.2E-20 6.9E-25 197.8 30.4 147 40-215 113-262 (505)
55 TIGR00879 SP MFS transporter, 99.9 3.2E-20 7E-25 195.5 30.2 145 48-215 68-215 (481)
56 TIGR00892 2A0113 monocarboxyla 99.9 3.9E-20 8.5E-25 194.0 28.4 150 40-216 43-193 (455)
57 PLN00028 nitrate transmembrane 99.9 8.2E-20 1.8E-24 192.6 30.5 175 13-215 34-217 (476)
58 PRK15075 citrate-proton sympor 99.9 2.2E-19 4.8E-24 187.5 33.4 173 13-204 13-199 (434)
59 TIGR00902 2A0127 phenyl propri 99.9 3.1E-19 6.8E-24 183.1 33.9 368 16-530 5-375 (382)
60 KOG2532 Permease of the major 99.9 1.2E-20 2.6E-25 195.0 22.3 369 45-534 67-447 (466)
61 PRK11652 emrD multidrug resist 99.9 3.9E-19 8.5E-24 183.2 33.4 170 13-209 6-175 (394)
62 PRK09528 lacY galactoside perm 99.9 1.3E-19 2.7E-24 188.5 29.4 392 14-533 9-402 (420)
63 TIGR00881 2A0104 phosphoglycer 99.9 3E-20 6.5E-25 189.6 23.9 152 37-214 16-168 (379)
64 PRK03893 putative sialic acid 99.9 1.6E-19 3.4E-24 192.0 29.4 167 12-205 17-183 (496)
65 TIGR00712 glpT glycerol-3-phos 99.9 9.1E-20 2E-24 190.6 26.3 155 37-214 48-203 (438)
66 PRK11043 putative transporter; 99.9 9.8E-19 2.1E-23 180.7 33.5 168 21-214 9-178 (401)
67 TIGR00882 2A0105 oligosacchari 99.9 5.4E-19 1.2E-23 182.3 30.7 179 15-214 2-180 (396)
68 PRK11102 bicyclomycin/multidru 99.9 4.3E-19 9.3E-24 181.7 28.9 153 34-213 10-162 (377)
69 KOG1330 Sugar transporter/spin 99.8 7.4E-21 1.6E-25 187.9 13.6 180 12-218 30-210 (493)
70 PRK08633 2-acyl-glycerophospho 99.8 1.9E-18 4E-23 202.1 35.2 156 14-192 8-165 (1146)
71 PRK10133 L-fucose transporter; 99.8 3.4E-18 7.4E-23 178.2 33.2 153 13-189 24-176 (438)
72 PRK06814 acylglycerophosphoeth 99.8 2.3E-18 4.9E-23 200.9 33.9 361 24-488 24-394 (1140)
73 KOG0569 Permease of the major 99.8 2E-18 4.4E-23 176.6 28.5 140 54-216 63-204 (485)
74 TIGR00886 2A0108 nitrite extru 99.8 4.3E-19 9.4E-24 180.8 22.9 160 16-201 2-171 (366)
75 TIGR00792 gph sugar (Glycoside 99.8 7.4E-18 1.6E-22 176.1 32.4 354 25-491 9-381 (437)
76 PRK11128 putative 3-phenylprop 99.8 1.6E-17 3.5E-22 170.4 32.9 155 24-209 13-171 (382)
77 PRK15034 nitrate/nitrite trans 99.8 6.7E-18 1.4E-22 173.6 29.1 157 37-215 55-230 (462)
78 TIGR00883 2A0106 metabolite-pr 99.8 5.5E-18 1.2E-22 173.8 28.5 156 37-210 14-184 (394)
79 KOG0254 Predicted transporter 99.8 1.1E-17 2.4E-22 178.2 31.6 380 33-486 64-453 (513)
80 PRK10473 multidrug efflux syst 99.8 1.6E-17 3.4E-22 171.1 31.5 167 19-212 7-173 (392)
81 TIGR00889 2A0110 nucleoside tr 99.8 1.4E-17 3.1E-22 172.7 30.4 386 18-535 5-403 (418)
82 PRK11010 ampG muropeptide tran 99.8 7.5E-17 1.6E-21 170.6 34.7 177 12-214 9-192 (491)
83 TIGR00896 CynX cyanate transpo 99.8 6.1E-18 1.3E-22 171.8 25.1 149 30-206 14-164 (355)
84 COG2223 NarK Nitrate/nitrite t 99.8 1.2E-17 2.6E-22 164.1 25.9 389 13-536 12-403 (417)
85 PF05977 MFS_3: Transmembrane 99.8 8.6E-17 1.9E-21 169.2 33.2 356 15-489 10-368 (524)
86 TIGR00885 fucP L-fucose:H+ sym 99.8 1.8E-16 3.9E-21 163.9 32.3 171 16-210 4-200 (410)
87 TIGR00901 2A0125 AmpG-related 99.8 1.8E-16 4E-21 161.0 27.8 156 35-214 7-175 (356)
88 PRK11902 ampG muropeptide tran 99.7 4.8E-15 1E-19 153.2 34.3 166 20-211 4-176 (402)
89 TIGR01301 GPH_sucrose GPH fami 99.7 4.1E-15 8.9E-20 154.1 33.3 434 16-535 5-472 (477)
90 KOG2615 Permease of the major 99.7 3.7E-16 8.1E-21 150.7 21.3 116 49-191 66-181 (451)
91 PRK09848 glucuronide transport 99.7 2.9E-14 6.2E-19 149.6 33.5 153 20-189 13-174 (448)
92 PRK10429 melibiose:sodium symp 99.7 3.1E-14 6.8E-19 150.2 32.3 146 22-186 13-163 (473)
93 COG0738 FucP Fucose permease [ 99.7 2.6E-14 5.6E-19 139.8 28.8 144 25-191 22-165 (422)
94 TIGR00806 rfc RFC reduced fola 99.7 5.3E-15 1.2E-19 149.6 24.7 154 35-216 45-202 (511)
95 PRK09669 putative symporter Ya 99.7 2.7E-14 5.9E-19 149.5 30.9 171 22-210 16-197 (444)
96 PF06609 TRI12: Fungal trichot 99.7 3.1E-14 6.8E-19 149.6 30.4 148 37-212 65-212 (599)
97 KOG0255 Synaptic vesicle trans 99.7 4.5E-14 9.8E-19 151.0 31.2 140 44-212 111-250 (521)
98 KOG3764 Vesicular amine transp 99.7 2.9E-15 6.2E-20 145.5 19.1 149 45-218 100-248 (464)
99 TIGR00788 fbt folate/biopterin 99.7 3.1E-14 6.7E-19 149.5 28.6 179 13-215 23-207 (468)
100 PF13347 MFS_2: MFS/sugar tran 99.7 1.1E-14 2.4E-19 151.8 24.7 355 25-491 11-385 (428)
101 PF00083 Sugar_tr: Sugar (and 99.7 3.3E-20 7.2E-25 194.7 -17.2 137 51-210 46-185 (451)
102 TIGR02718 sider_RhtX_FptX side 99.7 1.5E-13 3.2E-18 141.5 30.7 176 17-215 3-182 (390)
103 PF03825 Nuc_H_symport: Nucleo 99.6 3.7E-13 8E-18 137.7 31.7 385 20-536 7-397 (400)
104 TIGR00805 oat sodium-independe 99.6 1.1E-14 2.4E-19 157.8 21.5 199 13-218 30-282 (633)
105 PTZ00207 hypothetical protein; 99.6 1E-12 2.2E-17 139.1 35.3 171 13-209 26-197 (591)
106 COG2807 CynX Cyanate permease 99.6 1.1E-12 2.4E-17 126.6 27.5 364 20-534 17-385 (395)
107 PF01306 LacY_symp: LacY proto 99.6 2.6E-13 5.6E-18 136.6 23.7 387 15-535 7-401 (412)
108 KOG2504 Monocarboxylate transp 99.6 1.5E-13 3.3E-18 144.1 22.2 174 18-218 45-222 (509)
109 KOG0252 Inorganic phosphate tr 99.6 5.8E-14 1.3E-18 138.8 17.3 119 47-184 80-198 (538)
110 KOG0253 Synaptic vesicle trans 99.6 1.5E-12 3.3E-17 125.1 23.7 159 17-203 79-237 (528)
111 KOG2533 Permease of the major 99.5 2.5E-12 5.4E-17 133.7 26.4 150 43-218 73-228 (495)
112 PRK11462 putative transporter; 99.5 2.2E-11 4.7E-16 127.9 32.7 149 22-188 16-168 (460)
113 PRK10642 proline/glycine betai 99.5 7.5E-13 1.6E-17 140.4 20.6 179 13-215 248-428 (490)
114 PRK15011 sugar efflux transpor 99.5 3.2E-12 7E-17 131.7 19.0 176 13-215 214-389 (393)
115 PRK09556 uhpT sugar phosphate 99.4 3.6E-12 7.8E-17 134.4 17.8 175 16-214 259-446 (467)
116 COG2271 UhpC Sugar phosphate p 99.4 2.9E-12 6.2E-17 126.3 14.2 177 15-214 252-431 (448)
117 PF03209 PUCC: PUCC protein; 99.4 5.7E-10 1.2E-14 110.7 30.3 380 43-533 7-397 (403)
118 PRK05122 major facilitator sup 99.4 8.1E-12 1.8E-16 128.9 16.6 167 24-219 225-391 (399)
119 COG2211 MelB Na+/melibiose sym 99.4 1.4E-09 3E-14 110.9 31.8 361 20-491 17-397 (467)
120 cd06174 MFS The Major Facilita 99.4 1.9E-11 4.2E-16 123.0 18.5 173 15-213 175-348 (352)
121 TIGR00890 2A0111 Oxalate/Forma 99.4 1.7E-11 3.6E-16 124.9 17.3 169 16-209 206-374 (377)
122 PRK09952 shikimate transporter 99.4 2.6E-11 5.7E-16 126.7 19.1 181 13-215 248-431 (438)
123 PRK03699 putative transporter; 99.4 1.5E-11 3.3E-16 126.8 16.7 170 15-211 205-374 (394)
124 KOG4686 Predicted sugar transp 99.4 2.7E-12 5.9E-17 119.0 9.8 374 36-535 64-444 (459)
125 TIGR01299 synapt_SV2 synaptic 99.4 1.4E-11 2.9E-16 134.6 16.8 134 55-215 599-732 (742)
126 TIGR00899 2A0120 sugar efflux 99.4 2.7E-11 5.9E-16 123.7 17.7 171 17-214 201-371 (375)
127 TIGR00883 2A0106 metabolite-pr 99.3 1.2E-11 2.6E-16 126.8 14.5 168 13-204 217-388 (394)
128 TIGR00889 2A0110 nucleoside tr 99.3 2.1E-11 4.6E-16 126.5 16.1 177 18-217 211-402 (418)
129 PRK09705 cynX putative cyanate 99.3 6E-11 1.3E-15 122.2 19.0 174 15-216 205-380 (393)
130 PRK03893 putative sialic acid 99.3 6.9E-11 1.5E-15 125.7 18.4 149 33-205 293-441 (496)
131 PF11700 ATG22: Vacuole efflux 99.3 9E-09 1.9E-13 107.7 33.4 85 431-533 383-467 (477)
132 TIGR00880 2_A_01_02 Multidrug 99.3 8.7E-12 1.9E-16 107.7 9.3 132 58-215 5-136 (141)
133 PRK03545 putative arabinose tr 99.3 1.5E-10 3.3E-15 119.1 20.1 174 17-217 207-380 (390)
134 PRK09874 drug efflux system pr 99.3 7.9E-11 1.7E-15 121.8 17.3 168 22-215 226-396 (408)
135 PRK12382 putative transporter; 99.3 6.6E-11 1.4E-15 121.9 15.7 162 25-215 226-387 (392)
136 PRK11273 glpT sn-glycerol-3-ph 99.3 8.4E-11 1.8E-15 123.5 16.5 176 15-214 253-432 (452)
137 PRK11551 putative 3-hydroxyphe 99.3 1.3E-10 2.9E-15 120.1 17.8 166 20-212 225-391 (406)
138 TIGR00891 2A0112 putative sial 99.3 9.2E-11 2E-15 120.9 16.1 157 20-201 243-400 (405)
139 PRK03633 putative MFS family t 99.3 2.2E-10 4.8E-15 117.5 18.4 160 24-213 209-368 (381)
140 TIGR00902 2A0127 phenyl propri 99.3 2.6E-10 5.6E-15 117.0 18.6 169 15-212 205-374 (382)
141 PRK09528 lacY galactoside perm 99.3 5.4E-11 1.2E-15 123.7 13.6 165 24-214 232-400 (420)
142 PRK10489 enterobactin exporter 99.2 1.4E-10 3.1E-15 120.4 16.4 155 31-211 239-393 (417)
143 PRK11663 regulatory protein Uh 99.2 1.9E-10 4.2E-15 120.1 17.3 177 16-215 244-422 (434)
144 TIGR00892 2A0113 monocarboxyla 99.2 7.8E-11 1.7E-15 123.7 14.2 170 16-211 242-415 (455)
145 TIGR00893 2A0114 d-galactonate 99.2 2.9E-10 6.3E-15 116.3 17.6 176 15-213 215-395 (399)
146 COG2814 AraJ Arabinose efflux 99.2 7.7E-10 1.7E-14 110.6 19.2 177 14-217 210-386 (394)
147 PRK15075 citrate-proton sympor 99.2 3.2E-10 7E-15 118.4 17.0 153 21-196 244-398 (434)
148 TIGR00897 2A0118 polyol permea 99.2 8.1E-10 1.7E-14 114.2 19.3 176 16-215 223-399 (402)
149 PRK11010 ampG muropeptide tran 99.2 8.5E-10 1.8E-14 116.9 18.9 179 17-217 224-403 (491)
150 PF11700 ATG22: Vacuole efflux 99.2 8.8E-10 1.9E-14 115.2 18.6 183 14-216 280-467 (477)
151 TIGR00879 SP MFS transporter, 99.2 6.1E-10 1.3E-14 117.2 17.4 169 32-216 301-469 (481)
152 COG2223 NarK Nitrate/nitrite t 99.2 4.9E-10 1.1E-14 110.8 15.3 184 14-217 217-401 (417)
153 PRK10406 alpha-ketoglutarate t 99.2 1.1E-09 2.3E-14 114.5 18.1 169 24-215 252-422 (432)
154 KOG4686 Predicted sugar transp 99.2 8.8E-10 1.9E-14 102.6 14.5 174 8-209 257-434 (459)
155 KOG2816 Predicted transporter 99.1 2.2E-08 4.8E-13 103.7 25.6 364 16-492 19-394 (463)
156 KOG2563 Permease of the major 99.1 7.6E-09 1.6E-13 103.1 20.6 134 37-191 66-201 (480)
157 PRK10504 putative transporter; 99.1 2.1E-09 4.6E-14 113.5 17.6 157 16-195 262-418 (471)
158 TIGR01272 gluP glucose/galacto 99.1 1.3E-08 2.9E-13 101.0 22.1 79 122-206 8-102 (310)
159 KOG2325 Predicted transporter/ 99.1 1.3E-09 2.7E-14 111.5 14.4 158 8-187 27-186 (488)
160 PRK12307 putative sialic acid 99.1 3.3E-09 7.2E-14 110.5 18.1 144 30-198 246-389 (426)
161 PRK15402 multidrug efflux syst 99.1 8.7E-09 1.9E-13 106.6 21.1 170 16-207 216-385 (406)
162 TIGR00712 glpT glycerol-3-phos 99.1 1.4E-09 3.1E-14 113.7 15.1 176 16-215 252-431 (438)
163 TIGR00900 2A0121 H+ Antiporter 99.1 1.7E-09 3.8E-14 109.5 14.6 155 15-194 210-365 (365)
164 TIGR01272 gluP glucose/galacto 99.1 3.1E-09 6.8E-14 105.5 15.9 161 16-205 141-303 (310)
165 PLN00028 nitrate transmembrane 99.1 4.5E-09 9.7E-14 111.1 17.9 173 16-216 253-432 (476)
166 PRK10091 MFS transport protein 99.1 6E-09 1.3E-13 107.0 18.1 168 17-211 201-370 (382)
167 TIGR02332 HpaX 4-hydroxyphenyl 99.1 3.1E-09 6.7E-14 110.2 15.9 163 16-204 243-408 (412)
168 PRK11128 putative 3-phenylprop 99.1 7E-09 1.5E-13 106.4 18.4 166 15-209 205-371 (382)
169 TIGR00792 gph sugar (Glycoside 99.0 2.3E-09 5.1E-14 112.0 14.2 161 15-195 222-383 (437)
170 TIGR02718 sider_RhtX_FptX side 99.0 8.6E-09 1.9E-13 106.1 18.0 175 16-211 209-385 (390)
171 PF03092 BT1: BT1 family; Int 99.0 1.1E-07 2.4E-12 98.8 25.3 163 36-218 10-176 (433)
172 TIGR00882 2A0105 oligosacchari 99.0 7.6E-09 1.6E-13 106.7 16.0 169 17-211 217-389 (396)
173 PRK10077 xylE D-xylose transpo 99.0 1.4E-08 3E-13 107.5 18.4 157 37-216 293-456 (479)
174 PRK10133 L-fucose transporter; 99.0 1E-08 2.2E-13 107.1 16.8 166 17-211 260-427 (438)
175 TIGR00711 efflux_EmrB drug res 99.0 4.4E-09 9.6E-14 111.4 13.7 155 16-192 256-410 (485)
176 TIGR00895 2A0115 benzoate tran 99.0 7.3E-09 1.6E-13 106.3 14.7 147 16-189 251-397 (398)
177 PRK11902 ampG muropeptide tran 99.0 2.7E-08 6E-13 102.8 18.7 173 18-216 212-389 (402)
178 PRK14995 methyl viologen resis 99.0 9.2E-09 2E-13 109.3 15.5 153 16-191 260-412 (495)
179 PRK15034 nitrate/nitrite trans 99.0 2.7E-08 5.8E-13 102.9 18.1 186 15-216 252-453 (462)
180 TIGR00894 2A0114euk Na(+)-depe 99.0 2.9E-08 6.3E-13 104.7 18.9 176 15-214 261-447 (465)
181 TIGR00881 2A0104 phosphoglycer 99.0 7.3E-09 1.6E-13 105.5 13.6 162 15-199 216-379 (379)
182 TIGR00710 efflux_Bcr_CflA drug 99.0 4.5E-08 9.8E-13 100.2 19.5 162 17-201 208-370 (385)
183 COG2270 Permeases of the major 99.0 2.3E-07 5.1E-12 92.2 23.3 127 34-183 34-168 (438)
184 COG2270 Permeases of the major 99.0 1.1E-08 2.4E-13 101.4 14.0 173 16-214 253-426 (438)
185 PRK10213 nepI ribonucleoside t 99.0 4.8E-08 1.1E-12 100.6 19.6 164 16-207 217-381 (394)
186 PF03137 OATP: Organic Anion T 99.0 9.5E-11 2.1E-15 124.2 -0.6 194 22-223 10-256 (539)
187 PF05977 MFS_3: Transmembrane 98.9 2.1E-08 4.5E-13 106.1 16.7 171 17-213 220-390 (524)
188 TIGR00887 2A0109 phosphate:H+ 98.9 1.7E-08 3.8E-13 107.5 16.4 167 23-212 296-484 (502)
189 TIGR00896 CynX cyanate transpo 98.9 1.6E-08 3.6E-13 102.5 15.2 152 16-194 198-350 (355)
190 PRK10054 putative transporter; 98.9 1.9E-08 4.1E-13 103.7 14.8 172 16-213 207-380 (395)
191 PRK09848 glucuronide transport 98.9 3E-08 6.6E-13 104.0 16.2 162 16-195 229-391 (448)
192 PRK11646 multidrug resistance 98.9 2.9E-08 6.4E-13 102.5 15.7 154 33-212 226-383 (400)
193 PRK08633 2-acyl-glycerophospho 98.9 3.9E-08 8.4E-13 115.5 17.8 162 16-203 233-396 (1146)
194 TIGR00901 2A0125 AmpG-related 98.8 3.8E-08 8.3E-13 99.9 13.7 145 16-176 210-355 (356)
195 PF13347 MFS_2: MFS/sugar tran 98.8 1E-07 2.2E-12 99.4 16.8 161 15-194 225-386 (428)
196 COG2807 CynX Cyanate permease 98.8 2.2E-07 4.9E-12 90.4 17.3 163 16-204 209-372 (395)
197 PRK11195 lysophospholipid tran 98.8 2.6E-07 5.7E-12 95.1 19.0 157 28-211 218-374 (393)
198 PRK06814 acylglycerophosphoeth 98.8 7E-08 1.5E-12 113.3 16.5 183 15-204 225-409 (1140)
199 TIGR00898 2A0119 cation transp 98.8 5.2E-08 1.1E-12 103.9 14.0 132 58-215 362-493 (505)
200 PF05631 DUF791: Protein of un 98.8 4.4E-07 9.5E-12 89.0 17.8 149 44-215 62-214 (354)
201 PRK10473 multidrug efflux syst 98.7 4.3E-07 9.4E-12 93.5 18.1 71 32-103 220-290 (392)
202 TIGR00903 2A0129 major facilit 98.7 3.6E-07 7.9E-12 93.1 17.2 165 15-212 192-360 (368)
203 KOG2504 Monocarboxylate transp 98.7 8.7E-08 1.9E-12 100.9 12.9 176 15-217 298-476 (509)
204 PF07690 MFS_1: Major Facilita 98.7 6.5E-08 1.4E-12 97.5 11.5 143 18-183 209-352 (352)
205 PRK11102 bicyclomycin/multidru 98.7 8.5E-07 1.8E-11 90.6 19.6 148 17-187 196-344 (377)
206 PRK10429 melibiose:sodium symp 98.7 2.7E-07 5.9E-12 97.5 15.8 165 15-195 231-396 (473)
207 PRK11043 putative transporter; 98.7 1.5E-06 3.2E-11 89.7 20.5 151 23-196 211-361 (401)
208 PRK09669 putative symporter Ya 98.7 1.9E-07 4.1E-12 97.9 14.0 160 17-195 231-391 (444)
209 KOG0569 Permease of the major 98.7 9.7E-07 2.1E-11 91.2 17.5 189 13-220 267-457 (485)
210 TIGR00885 fucP L-fucose:H+ sym 98.6 9.1E-07 2E-11 91.6 15.9 163 16-207 233-402 (410)
211 KOG0253 Synaptic vesicle trans 98.6 8.1E-07 1.8E-11 86.3 14.0 146 15-186 326-490 (528)
212 PF03825 Nuc_H_symport: Nucleo 98.6 2.6E-06 5.6E-11 87.5 18.4 173 17-214 209-392 (400)
213 KOG3626 Organic anion transpor 98.6 1.7E-06 3.7E-11 92.5 17.2 203 13-222 94-348 (735)
214 TIGR00886 2A0108 nitrite extru 98.6 5.4E-07 1.2E-11 91.6 12.6 139 16-178 226-365 (366)
215 KOG2532 Permease of the major 98.6 1.1E-06 2.4E-11 91.5 14.8 176 16-216 259-446 (466)
216 PRK11652 emrD multidrug resist 98.5 9.1E-06 2E-10 83.7 19.2 139 35-197 227-365 (394)
217 TIGR00924 yjdL_sub1_fam amino 98.5 2.4E-06 5.1E-11 90.3 14.9 184 16-215 273-466 (475)
218 COG2211 MelB Na+/melibiose sym 98.5 2.7E-06 5.9E-11 87.1 14.2 158 16-191 237-395 (467)
219 PF06813 Nodulin-like: Nodulin 98.4 9.7E-06 2.1E-10 76.9 15.7 160 36-216 22-181 (250)
220 PF01306 LacY_symp: LacY proto 98.4 5.9E-06 1.3E-10 83.8 14.4 170 15-210 220-393 (412)
221 PRK11462 putative transporter; 98.3 1.1E-05 2.4E-10 84.9 16.0 157 17-192 230-387 (460)
222 KOG3098 Uncharacterized conser 98.3 0.00036 7.7E-09 71.8 25.7 100 57-183 56-155 (461)
223 PF03209 PUCC: PUCC protein; 98.3 2.1E-05 4.6E-10 78.6 15.8 174 18-213 211-394 (403)
224 TIGR00880 2_A_01_02 Multidrug 98.3 2.3E-05 4.9E-10 67.1 13.8 133 357-534 6-138 (141)
225 PRK15403 multidrug efflux syst 98.3 3.7E-05 8E-10 79.8 17.7 167 16-205 219-385 (413)
226 COG0477 ProP Permeases of the 98.3 2.6E-05 5.7E-10 76.0 15.8 146 36-205 23-173 (338)
227 KOG3762 Predicted transporter 98.3 7.6E-05 1.7E-09 76.5 18.8 110 388-531 434-544 (618)
228 PRK10207 dipeptide/tripeptide 98.3 1.1E-05 2.4E-10 85.4 13.6 152 21-189 275-438 (489)
229 PF01770 Folate_carrier: Reduc 98.2 0.00079 1.7E-08 68.2 24.4 154 36-216 24-181 (412)
230 PRK09584 tppB putative tripept 98.1 3.8E-05 8.3E-10 81.7 14.2 145 25-187 282-439 (500)
231 PF12832 MFS_1_like: MFS_1 lik 98.1 2.4E-05 5.2E-10 59.7 9.1 70 21-92 6-75 (77)
232 PF02487 CLN3: CLN3 protein; 98.1 0.0021 4.5E-08 65.1 24.7 131 54-215 62-193 (402)
233 TIGR00769 AAA ADP/ATP carrier 98.0 0.0061 1.3E-07 63.6 28.1 162 14-190 6-189 (472)
234 TIGR00788 fbt folate/biopterin 98.0 1.6E-05 3.4E-10 83.9 8.9 143 43-201 280-427 (468)
235 TIGR01301 GPH_sucrose GPH fami 98.0 0.00015 3.3E-09 75.8 15.8 205 9-218 252-472 (477)
236 KOG1330 Sugar transporter/spin 98.0 5.2E-06 1.1E-10 83.5 4.6 141 351-535 70-210 (493)
237 COG0738 FucP Fucose permease [ 98.0 0.00016 3.4E-09 71.9 14.3 154 18-200 239-392 (422)
238 KOG3764 Vesicular amine transp 98.0 1.1E-05 2.3E-10 79.7 5.7 157 32-208 287-445 (464)
239 KOG3762 Predicted transporter 97.9 3.7E-05 7.9E-10 78.7 8.1 172 21-219 377-549 (618)
240 KOG4332 Predicted sugar transp 97.9 0.00015 3.2E-09 67.7 11.2 151 41-213 62-216 (454)
241 PF06963 FPN1: Ferroportin1 (F 97.8 0.021 4.5E-07 58.9 27.2 59 427-485 355-413 (432)
242 KOG2533 Permease of the major 97.8 0.00015 3.2E-09 76.1 11.3 162 16-201 274-440 (495)
243 KOG0254 Predicted transporter 97.7 0.001 2.2E-08 71.1 15.9 144 13-172 292-437 (513)
244 PF00083 Sugar_tr: Sugar (and 97.7 2.5E-07 5.5E-12 97.1 -11.6 185 15-219 252-438 (451)
245 TIGR00805 oat sodium-independe 97.5 0.0011 2.4E-08 72.5 13.8 129 351-490 70-234 (633)
246 PF06609 TRI12: Fungal trichot 97.5 0.003 6.4E-08 67.5 16.0 150 13-186 308-461 (599)
247 TIGR00806 rfc RFC reduced fola 97.4 0.004 8.6E-08 64.3 14.6 84 389-488 91-174 (511)
248 PRK15462 dipeptide/tripeptide 97.4 0.0049 1.1E-07 64.8 15.7 159 13-189 266-437 (493)
249 PF06779 DUF1228: Protein of u 97.3 0.0025 5.4E-08 49.2 9.4 73 26-103 6-78 (85)
250 PF05978 UNC-93: Ion channel r 97.3 0.0095 2.1E-07 52.3 13.9 106 54-186 40-145 (156)
251 KOG0637 Sucrose transporter an 97.1 0.00033 7.2E-09 70.6 3.1 166 15-189 32-202 (498)
252 KOG0252 Inorganic phosphate tr 97.1 0.00097 2.1E-08 67.4 6.3 179 16-216 305-497 (538)
253 PTZ00207 hypothetical protein; 96.8 0.0082 1.8E-07 64.4 11.0 172 16-216 354-551 (591)
254 KOG2615 Permease of the major 96.7 0.02 4.2E-07 56.9 11.7 151 16-191 261-413 (451)
255 KOG3574 Acetyl-CoA transporter 96.7 0.83 1.8E-05 45.7 23.1 58 429-486 370-428 (510)
256 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.13 2.7E-06 56.4 18.7 166 46-226 15-188 (654)
257 PRK03612 spermidine synthase; 96.5 0.12 2.5E-06 55.2 17.2 174 15-213 17-194 (521)
258 KOG2563 Permease of the major 96.5 0.028 6.1E-07 57.0 11.4 183 17-222 268-455 (480)
259 KOG0255 Synaptic vesicle trans 96.3 0.1 2.2E-06 55.9 15.6 106 63-191 362-467 (521)
260 KOG2816 Predicted transporter 96.2 0.021 4.6E-07 59.6 9.3 125 38-189 264-389 (463)
261 KOG2325 Predicted transporter/ 96.0 0.091 2E-06 54.6 12.5 152 356-535 78-230 (488)
262 COG3104 PTR2 Dipeptide/tripept 95.4 0.21 4.6E-06 51.6 12.3 155 16-187 285-451 (498)
263 PF00854 PTR2: POT family; In 95.4 0.13 2.8E-06 52.5 10.8 122 391-537 2-126 (372)
264 PF03219 TLC: TLC ATP/ADP tran 95.2 4.9 0.00011 42.4 22.0 166 14-191 23-205 (491)
265 PF03137 OATP: Organic Anion T 94.4 0.011 2.4E-07 63.2 0.0 169 18-192 308-514 (539)
266 PF06963 FPN1: Ferroportin1 (F 94.1 1.7 3.7E-05 45.0 15.0 135 36-187 279-413 (432)
267 PF05978 UNC-93: Ion channel r 93.9 0.82 1.8E-05 40.1 10.7 61 427-487 88-148 (156)
268 KOG3880 Predicted small molecu 93.7 1.1 2.3E-05 43.6 11.6 113 18-151 15-142 (409)
269 PF06813 Nodulin-like: Nodulin 92.9 1.5 3.2E-05 41.9 11.5 90 388-486 64-153 (250)
270 TIGR00939 2a57 Equilibrative N 92.4 16 0.00034 38.1 29.7 59 429-487 373-431 (437)
271 KOG1479 Nucleoside transporter 91.6 17 0.00038 37.0 25.2 59 427-485 342-400 (406)
272 KOG0637 Sucrose transporter an 91.6 0.67 1.4E-05 47.5 7.7 160 313-485 38-200 (498)
273 KOG3626 Organic anion transpor 90.6 1 2.2E-05 49.2 8.5 81 17-97 394-476 (735)
274 KOG3098 Uncharacterized conser 89.7 8.8 0.00019 40.0 14.1 116 61-186 289-408 (461)
275 PF05631 DUF791: Protein of un 88.3 23 0.00049 35.5 15.3 168 15-184 119-300 (354)
276 PF03092 BT1: BT1 family; Int 86.3 1.1 2.3E-05 46.8 5.2 132 44-193 245-381 (433)
277 KOG4332 Predicted sugar transp 85.8 5.5 0.00012 38.0 8.9 140 53-212 284-426 (454)
278 TIGR00939 2a57 Equilibrative N 84.6 3.7 8.1E-05 42.8 8.2 156 15-186 269-428 (437)
279 PF02487 CLN3: CLN3 protein; 82.9 11 0.00024 38.5 10.5 61 123-189 334-394 (402)
280 KOG3810 Micronutrient transpor 80.5 8.8 0.00019 38.2 8.2 99 426-535 324-422 (433)
281 KOG3097 Predicted membrane pro 77.0 33 0.00072 34.0 10.9 71 63-154 70-140 (390)
282 PF07672 MFS_Mycoplasma: Mycop 73.4 76 0.0016 30.4 12.1 58 164-221 4-66 (267)
283 TIGR00769 AAA ADP/ATP carrier 69.0 1.6E+02 0.0034 31.1 15.9 44 445-488 146-189 (472)
284 KOG4830 Predicted sugar transp 58.4 14 0.00031 35.1 4.1 79 3-85 7-94 (412)
285 COG0477 ProP Permeases of the 57.9 1.4E+02 0.003 27.9 11.6 61 428-488 94-156 (338)
286 PF01770 Folate_carrier: Reduc 57.5 2.4E+02 0.0051 29.2 14.1 61 427-488 93-153 (412)
287 COG5336 Uncharacterized protei 56.9 48 0.001 26.7 6.2 39 55-93 46-84 (116)
288 PF13000 Acatn: Acetyl-coenzym 54.6 2.9E+02 0.0063 29.3 21.3 56 428-483 405-460 (544)
289 COG3202 ATP/ADP translocase [E 53.0 3E+02 0.0066 29.0 24.3 164 14-192 26-210 (509)
290 KOG1479 Nucleoside transporter 52.2 43 0.00093 34.3 6.8 106 37-157 265-376 (406)
291 KOG1237 H+/oligopeptide sympor 47.5 1.1E+02 0.0024 33.1 9.4 131 388-537 102-248 (571)
292 PF09527 ATPase_gene1: Putativ 44.7 1E+02 0.0023 21.3 6.4 36 59-94 8-43 (55)
293 PF01733 Nucleoside_tran: Nucl 42.3 7.1 0.00015 38.6 -0.5 117 55-185 186-303 (309)
294 PF02694 UPF0060: Uncharacteri 40.8 1.7E+02 0.0036 23.7 7.0 52 49-101 52-103 (107)
295 KOG3810 Micronutrient transpor 36.6 1.3E+02 0.0029 30.2 7.2 121 25-170 244-366 (433)
296 KOG3574 Acetyl-CoA transporter 36.1 1.8E+02 0.004 29.7 8.1 164 20-199 270-438 (510)
297 TIGR01667 YCCS_YHJK integral m 31.5 3.6E+02 0.0077 30.2 10.4 53 70-140 42-97 (701)
298 TIGR01666 YCCS hypothetical me 29.1 4.2E+02 0.0092 29.6 10.4 52 72-141 44-98 (704)
299 PRK02237 hypothetical protein; 26.4 3.6E+02 0.0077 22.0 7.7 50 51-101 56-105 (109)
300 PF06645 SPC12: Microsomal sig 25.1 1.9E+02 0.0042 21.8 4.9 41 171-214 13-53 (76)
301 PF03219 TLC: TLC ATP/ADP tran 24.5 8.7E+02 0.019 25.8 17.2 63 134-201 292-354 (491)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-48 Score=407.92 Aligned_cols=518 Identities=40% Similarity=0.702 Sum_probs=460.8
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 10 QKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
.++.|+++..++..+.+|++++|++..++..|+.+++|.+..++.-.++.+.......++++++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCC----CCCCccCC--chhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhh
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDC----GKSSCVKG--GIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKA 163 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (537)
++..+|..++......+.+.++.| ..+.|++. .....++.++-+.++|.|+..|+..++.+||+++..+.++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999998888888888775 33445443 355678888899999999999999999999999777777777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHh
Q 044175 164 LASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKN 243 (537)
Q Consensus 164 r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 243 (537)
+.+.|+|+|...++|..++..+..++.++.+|.+.|.++.++..+++++++...+.++.++|.+++...+.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCC----CCCCCcccccchhHHHHHHHHhHHHHHHHH
Q 044175 244 RKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDS----TEAAPWRVCTLTQVEEVKILTRMMPILAST 319 (537)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 319 (537)
++...+.+++++... ........+.++++++|++......+ .+..+|+.|+.+++|+.|.++|.++++...
T Consensus 272 ~~~~~~~~~~~~~~~-----~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~ 346 (571)
T KOG1237|consen 272 RKAVVSLDPEELYYD-----CTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT 346 (571)
T ss_pred HhccCCCcchhcccc-----ccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence 887777664443111 01112223356788999987765432 234679999999999999999999999999
Q ss_pred HHHHHhhhhcchhhheeccccCCCCCc-cccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHH
Q 044175 320 ILMNTCLAQLQTFSVTQGAYMDPQLGS-IKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLV 398 (537)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~ 398 (537)
+.++.++.|+.+.+..|...+|...++ +.+|++.++.+..+..++..|+.|+...|+.||.++++.+.+.++++.+|++
T Consensus 347 i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~ 426 (571)
T KOG1237|consen 347 IIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLV 426 (571)
T ss_pred HHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccch
Confidence 999999999999999999999999987 9999999999999999999999999999999999887777899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcc--CCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHH
Q 044175 399 LSAVSMTIAGFVEVQRRNAFNQ--MPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFG 476 (537)
Q Consensus 399 l~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g 476 (537)
+..+++...+..+..|.+...+ +..++++++|++|+|+++|++|++..++..||.++++|++||+.+++++.+..++|
T Consensus 427 ~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G 506 (571)
T KOG1237|consen 427 LSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVG 506 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998886654 22357999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCcc-CCCCCCchhHHHHHHHHHHHHHHHHHHhhhcccC
Q 044175 477 NFLSSVFVDIINAVTKRITPSKQGWLH-GTDINKNNANLFYWFLAILSVLNFVLYLYAAAWY 537 (537)
Q Consensus 477 ~~~~~~l~~~i~~~~~~~~~~~~~w~~-~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~y 537 (537)
+.++..+..++...+.. +.+|+. + ++|+++.+++||+++.++.++.+.+....+||
T Consensus 507 ~~lss~Lv~~v~~~t~~----~~~w~~~~-~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y 563 (571)
T KOG1237|consen 507 NYLSSVLVSLVQFSTGK----AAEWLGFA-NLNKGRLDYFYWLLAVYSAVNFLYFLICAKRY 563 (571)
T ss_pred HHHHHHHHHHHHHhcCC----CcccCChh-HhhhhHHHHHHHHHHHHHhhhhhheEEEEEee
Confidence 99999999988866521 347999 7 99999999999999999999999999999887
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=346.31 Aligned_cols=460 Identities=16% Similarity=0.283 Sum_probs=347.8
Q ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC----CchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHH
Q 044175 9 KQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMH----FNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFAT 84 (537)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~ 84 (537)
+.-++||.++.++..|++|||+|||+...+..|+..+++ ++++++..+.+.|....++.+++|||+|||++|+||+
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 444689999999999999999999999999999998887 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhh
Q 044175 85 CLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKAL 164 (537)
Q Consensus 85 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 164 (537)
+..|.++.++|.+.++... ......++++.+++++|.|+++|+..++++|++|+++|| |
T Consensus 95 I~lGail~~iGh~~L~~~~-----------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----r 153 (498)
T COG3104 95 IVLGAILMAIGHLVLAISS-----------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----R 153 (498)
T ss_pred HHHHHHHHHHHHHHHhccc-----------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----c
Confidence 9999999999999998762 125678999999999999999999999999999999987 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccC--CCCCchhh------HHHH
Q 044175 165 ASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQ--PGESPLVR------VSQV 236 (537)
Q Consensus 165 ~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------v~~~ 236 (537)
...++.+|++.|+|+.++|.+.+++.+.+||+..|.++++-+.++++.+++.+++..... +++.+... ...+
T Consensus 154 D~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (498)
T COG3104 154 DGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGL 233 (498)
T ss_pred CCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHH
Confidence 899999999999999999999999999999999999999999999998888887765543 22222211 0000
Q ss_pred HHHHHHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHH
Q 044175 237 VVVAIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPIL 316 (537)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (537)
+....... ..... ..+..+.......-.-..-+..+ . .+| .+.+ +++|+++..++++
T Consensus 234 ~~~~~~~~-------~~~~l--~~~~~~~~~~~~~i~~~~~~~~~-~---------~~~---~~~~-~er~r~~~~~~Lf 290 (498)
T COG3104 234 VVMILAAL-------LTLLL--NQNTFSGVLLVISILIAIIYFAE-A---------FRS---PKVF-DERRRLLAAIPLF 290 (498)
T ss_pred HHHHHHHH-------HHHHH--HHHHHHHHHHHHHHHHHHHHHHH-H---------hcc---CccH-HHHHHHHHHHHHH
Confidence 00000000 00000 00000000000000000000000 0 011 1122 6788888999999
Q ss_pred HHHHHHHHhhhhcchhhheeccc-cCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHH
Q 044175 317 ASTILMNTCLAQLQTFSVTQGAY-MDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGV 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~ 395 (537)
.+.++||.+++|..+.+..+... .+.+..|+.++++++|++|++.+++++|+.+++..++.++. + .++...+..+
T Consensus 291 l~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~-~---~ps~~~KFal 366 (498)
T COG3104 291 LFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN-K---QPSTPIKFAL 366 (498)
T ss_pred HHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC-C---CCCcchHHHH
Confidence 99999999999999876666543 34443458899999999999999999999999998876664 2 2688999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHH
Q 044175 396 GLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSF 475 (537)
Q Consensus 396 g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~ 475 (537)
|+.+++++++..........+. + ...+.+|+++.|+++++||.+.+|.+.+++++.+|+++++.++++|.+.+..
T Consensus 367 Gl~l~g~~fl~l~~~~~~~~~~--~---~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~ 441 (498)
T COG3104 367 GLILAGLGFLILLLAGIWFGGP--S---GLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAA 441 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhcCC--C---CCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 9999999998877653332110 1 2478999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 044175 476 GNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAA 534 (537)
Q Consensus 476 g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~ 534 (537)
++.++..+.+.... +. + ..+......+|+..+..+++..+....+.
T Consensus 442 ~~~l~g~va~~~~~-~~-------~-----~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 442 GQTLGGQVAGLTAV-TD-------P-----AYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred HHHhhceecccccc-cc-------h-----hhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99998777663110 00 0 11123345667777777666655544443
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=4.7e-38 Score=330.36 Aligned_cols=458 Identities=12% Similarity=0.165 Sum_probs=326.1
Q ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHH
Q 044175 9 KQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIF 88 (537)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 88 (537)
..++|||.++.++..+++||++||++..++++|+++++|++..+++++.+.+....++.++++|+++||++||||++.++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 44679999999999999999999999999999999999999999999999999999999999999999944999999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHH
Q 044175 89 GTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYF 168 (537)
Q Consensus 89 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 168 (537)
.+++.++++++.++. .....++++|+++++|.|..+|+..++++|++|+++++ |++.+
T Consensus 88 ~~~~~~g~~~~~~~~------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~~ 145 (489)
T PRK10207 88 AIVLAIGYFMTGMSL------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGAF 145 (489)
T ss_pred HHHHHHHHHHHHHhc------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcch
Confidence 999999999998764 12334668899999999999999999999999977632 67889
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccccccc--CCCCCchhhHHHH------H--H
Q 044175 169 NYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQ--QPGESPLVRVSQV------V--V 238 (537)
Q Consensus 169 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~------~--~ 238 (537)
+++|++.|+|..++|.+++++.++.|||+.|+++.+...+.++.+...++.+++. +|++++.+..... . .
T Consensus 146 ~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~ 225 (489)
T PRK10207 146 TLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMI 225 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997765555565555555444332 2222222111100 0 0
Q ss_pred HHHHhccCCCCCChhhh-hhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHH
Q 044175 239 VAIKNRKLSLPENPEEL-YEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILA 317 (537)
Q Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (537)
....... +.. ..... ...... . ...-++.+.. ..++ .++++.+....++.
T Consensus 226 ~~~~~~~-~~~-~~~~~~~~~~~~--------i---~~~~f~~~~~---------------~~~~-~~r~r~~~~~~l~~ 276 (489)
T PRK10207 226 FVCAWLM-HNV-EVANLVLIVLSI--------V---VTIIFFREAF---------------KLDK-TGRNKMFVAFVLML 276 (489)
T ss_pred HHHHHHH-hhh-hHHHHHHHHHHH--------H---HHHHHHHHHh---------------cCCH-HHHHHHHHHHHHHH
Confidence 0000000 000 00000 000000 0 0000000000 0011 22344445566666
Q ss_pred HHHHHHHhhhhcchhhheecc-ccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHH
Q 044175 318 STILMNTCLAQLQTFSVTQGA-YMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVG 396 (537)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g 396 (537)
....+|..+.|..+....+.. ..+.+..++.++++.++++|++..++..|+.+++.+++.+| +..+++..++.+|
T Consensus 277 ~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r----~~~~~~~~k~~~G 352 (489)
T PRK10207 277 EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK----GKDLSMPMKFTLG 352 (489)
T ss_pred HHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC----CCCCCcHHHHHHH
Confidence 788889999888665444433 45555567778889999999999999999988765554433 2246889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHH
Q 044175 397 LVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFG 476 (537)
Q Consensus 397 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g 476 (537)
+++.+++++.......... ..++ ..+.+|+++.+++.++||.+.+|..++++++.+|++++|.++|++++.+++|
T Consensus 353 ~~l~~~~~~~~~~~~~~~~---~~~~--~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig 427 (489)
T PRK10207 353 MFLCSLGFLTAAAAGMWFA---DAQG--LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAA 427 (489)
T ss_pred HHHHHHHHHHHHHHHHhhc---CCCC--ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 9999999876543321111 0111 2567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 477 NFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 477 ~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
+.++..+......... .+++ ...+.++.++|...++.+++..++++++.+
T Consensus 428 ~~lg~~l~~~~~~~~~----~~~~-----~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 428 FLLGGYVATFTAVPDN----ITDP-----LETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHhccccc----cccc-----hhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888765531110 0000 011234677888888777776666666554
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.3e-36 Score=319.20 Aligned_cols=451 Identities=14% Similarity=0.173 Sum_probs=324.3
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHH
Q 044175 10 QKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNE--MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 87 (537)
.+++||.++.+++.+++|+++||++.++++.|++++ +|++..+++.+.+.+.....++++++|+++||++||||++.+
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 356899999999999999999999999999999887 999999999999999999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhH
Q 044175 88 FGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASY 167 (537)
Q Consensus 88 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 167 (537)
+.++.+++.++++++. +...++++|++.|+|.|...|+..++++|++|+++++ +|+++
T Consensus 85 ~~~~~~~g~~~~~~~~-------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~~ 142 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSI-------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDGG 142 (475)
T ss_pred HHHHHHHHHHHHHhcc-------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccce
Confidence 9999999998888763 4567788999999999999999999999999876521 27889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhh----H-HH------H
Q 044175 168 FNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVR----V-SQ------V 236 (537)
Q Consensus 168 ~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v-~~------~ 236 (537)
++++|.+.|+|.+++|.+++++.++.||++.|.++++..+++.+.++..++.+++.++++++.++ . .+ .
T Consensus 143 ~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (475)
T TIGR00924 143 FTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAA 222 (475)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHH
Confidence 99999999999999999999999988999999998876666666665555554433222221110 0 00 0
Q ss_pred HHHHHHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHH
Q 044175 237 VVVAIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPIL 316 (537)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (537)
+...................... ... .......+... .+ ..++ +++++..+.+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~---------~~----~~~~-~~~~~~~~~l~l~ 278 (475)
T TIGR00924 223 LALVFFCAWLMHHVVIANILLMT-VTL---------AVIIFFFRLAF---------KP----RLDA-VARNKMYAYIVLF 278 (475)
T ss_pred HHHHHHHHHHHhccHHHHHHHHH-HHH---------HHHHHHHHHHH---------hc----cCCH-HHHhHHHHHHHHH
Confidence 00000000000000000000000 000 00000000000 00 0011 2233344577788
Q ss_pred HHHHHHHHhhhhcchhh-heeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHH
Q 044175 317 ASTILMNTCLAQLQTFS-VTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGV 395 (537)
Q Consensus 317 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~ 395 (537)
....++|..+.|..+.+ .++...++.+.+++.+|++.++++|++.+++.+|+.+++..++.||. .+++...++.+
T Consensus 279 ~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~----~~~~~~~k~~~ 354 (475)
T TIGR00924 279 LEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG----KDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC----CCCCcHHHHHH
Confidence 88889999999988754 34444566666677889999999999999999999887544443331 12477778999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHH
Q 044175 396 GLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSF 475 (537)
Q Consensus 396 g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~ 475 (537)
|+++.++++...++.... ...+ .+.+.+|+++++++.++||.+..|..++++++.+|+++||+++|++.+...+
T Consensus 355 G~~l~~~~~~~~~~~~~~----~~~~--~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWF----ADAG--GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHhh----cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999887765211 1111 1468899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 476 GNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 476 g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
|+.+++.+.....+. .++..+|...++.+++..++++++.+
T Consensus 429 g~~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 429 GSLLGGYLATFGAVP-------------------QGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHhcc-------------------cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887754311 12344566666666655555555443
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=6.6e-36 Score=309.36 Aligned_cols=417 Identities=15% Similarity=0.215 Sum_probs=307.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
+|||.++.++..+++|++++|++..+++.|+++++|+++.+++.+.+.+....+++++++|+++||++||||++.++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999944999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++.... .+...+.++..+..+|.|...++.+++++|++|+++++ |.+++++.
T Consensus 86 ~~lg~lll~~~~------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i~ 143 (493)
T PRK15462 86 MAIGHVVLGASE------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSLM 143 (493)
T ss_pred HHHHHHHHHHhh------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehHH
Confidence 999987665432 12233555666677888999999999999999977533 88899999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCC-CCCch--hhHH----HHHHH-H---
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQP-GESPL--VRVS----QVVVV-A--- 240 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~v~----~~~~~-~--- 240 (537)
|...|+|+.++|.+++++.+.+||+..|.++++.++++++.++..++.+.+..+ ++++. ++.. ..+.. .
T Consensus 144 Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (493)
T PRK15462 144 YAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVAT 223 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999998999999999877666666666665554433211 11111 1100 00000 0
Q ss_pred --HHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHH
Q 044175 241 --IKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILAS 318 (537)
Q Consensus 241 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (537)
......... ........... . . . --.-++.+.+ ...+|+|++...+.+..+
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~--~---~-~---~~~~~~~~~~-----------------~~~~er~r~~~~~~l~~~ 276 (493)
T PRK15462 224 PALITVLFWKE-WSVYALIVATI--I---G-L---GVLAKIYRKA-----------------ENQKQRKELGLIVTLTFF 276 (493)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHH--H---H-H---HHHHHHHHhc-----------------CCHHHHhhHHHHHHHHHH
Confidence 000000000 00000000000 0 0 0 0000000000 012567778888899999
Q ss_pred HHHHHHhhhhcchhhh-eeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHH
Q 044175 319 TILMNTCLAQLQTFSV-TQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGL 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~ 397 (537)
.++||..++|.++... +...+.|.++.++.+|+++++++|++.+++++|+...+..++.+| ++.++...|..+|+
T Consensus 277 ~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~----~~~~s~~~Kfa~g~ 352 (493)
T PRK15462 277 SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG----NRTVRIWGKFALGL 352 (493)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC----CCCCCcHHHHHHHH
Confidence 9999999999987543 344667888888999999999999999999999998865444322 11368899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHH-HHH
Q 044175 398 VLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSL-SFG 476 (537)
Q Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~-~~g 476 (537)
++++++++++....... ..++ ..+.+|++..+++.++||.+.+|.+++++.+.+|++.||..+|++.+.. .+|
T Consensus 353 ~~~g~~f~~l~~~~~~~----~~~~--~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~ 426 (493)
T PRK15462 353 GLMSAGFCILTLSARWS----AMYG--HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIA 426 (493)
T ss_pred HHHHHHHHHHHHHHhhc----CCCC--CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999998776643221 1112 3678899999999999999999999999999999999999999998854 799
Q ss_pred HHHHHHHHHHh
Q 044175 477 NFLSSVFVDII 487 (537)
Q Consensus 477 ~~~~~~l~~~i 487 (537)
+.++..+....
T Consensus 427 ~~~~g~~~~~~ 437 (493)
T PRK15462 427 NYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHh
Confidence 98887776654
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=6.8e-35 Score=308.04 Aligned_cols=452 Identities=13% Similarity=0.206 Sum_probs=318.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
+++|.++.+++.+++|++++|++..+++.|+++++|++..+++++.+.+.......++++|+++||++|||+++.++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999998888888888889999999933999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++..++.++. +....+.++|+++|+|.|...++..++++|++|+++++ |.++++++
T Consensus 98 ~~ig~~l~~~~~------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~~ 155 (500)
T PRK09584 98 LAIGYALVAWSG------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTMY 155 (500)
T ss_pred HHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchHH
Confidence 999988888763 23456778899999999999999999999999876532 56688899
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccccccc--CCCCCchhhH------HHHHHHHHHh
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQ--QPGESPLVRV------SQVVVVAIKN 243 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v------~~~~~~~~~~ 243 (537)
|.+.++|+.++|.+++++.++.||++.|.++++...++++.++..++..++. +|++++.+.. ..+.......
T Consensus 156 ~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (500)
T PRK09584 156 YMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIA 235 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999989999999998876666555544443333322 2222222111 0111111110
Q ss_pred c-cCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHH
Q 044175 244 R-KLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILM 322 (537)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 322 (537)
. ....++.......... .....+..... +..++ +++++....+.++...++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~i~f 288 (500)
T PRK09584 236 TWLLHNQEIARMALGVVA--------------LGIVVIFGKEA------------FAMKG-AARRKMIVAFILMLEAIIF 288 (500)
T ss_pred HHHHhcchHHHHHHHHHH--------------HHHHHHHHHHH------------hhcCH-HHHHHHHHHHHHHHHHHHH
Confidence 0 0000100000000000 00000000000 00112 3444555566677788889
Q ss_pred HHhhhhcchhhheecc-ccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHH
Q 044175 323 NTCLAQLQTFSVTQGA-YMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSA 401 (537)
Q Consensus 323 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~ 401 (537)
|..+.|.++.+..+.. ..+....++.++++.++++|++.+++.+|+.+++..++.+| .+..+++.+|+++++
T Consensus 289 ~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-------~~~~~~~~~G~~l~~ 361 (500)
T PRK09584 289 FVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-------LPMPHKFAIGMVLCS 361 (500)
T ss_pred HHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-------CCcHHHHHHHHHHHH
Confidence 9999999887655432 34545556778899999999999999999988754433333 367899999999999
Q ss_pred HHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHH
Q 044175 402 VSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSS 481 (537)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~ 481 (537)
++++........ ..++ ...+.+|+++++++.++||++..|.+.+++.+.+|+++||.++|++.+...+|+.++.
T Consensus 362 l~f~~l~~~~~~----~~~~--~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g 435 (500)
T PRK09584 362 GAFLVLPLGAKF----ANDA--GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAG 435 (500)
T ss_pred HHHHHHHHHHHh----cCCC--CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887664322 1111 1466789999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 044175 482 VFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAA 534 (537)
Q Consensus 482 ~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~ 534 (537)
.+...+..... ..++ .....++..+|...+..+++..++.+...
T Consensus 436 ~~~~~~~~~~~----~~~~-----~~~~~~~~~~f~~~~~~~~~~a~~~~~~~ 479 (500)
T PRK09584 436 YVANLMAVPDN----VTDP-----LMSLEVYGRVFLQIGIATAVIAVLMLLTA 479 (500)
T ss_pred HHHHHhccccc----cccc-----hhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87754331000 0000 11123467788887877665555544433
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=1.9e-30 Score=277.66 Aligned_cols=438 Identities=21% Similarity=0.382 Sum_probs=348.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 044175 29 MGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKL 108 (537)
Q Consensus 29 ~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~ 108 (537)
++||++...+.+|+.+.+|++.+++..+...+....++.++++|+++|+++||+|++.++.++..+|..++++.+..+..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999988875421111
Q ss_pred CCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q 044175 109 HPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVY 188 (537)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 188 (537)
. .......+++..+.++|.|+++|+..++.+|++++++ +.+|.++++++|+++|+|+.+++++.++
T Consensus 81 ~-----------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 81 H-----------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred c-----------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1133457788899999999999999999999998654 2348899999999999999999999999
Q ss_pred hccc-------ccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhhh
Q 044175 189 VSTE-------KAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINEK 261 (537)
Q Consensus 189 l~~~-------~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (537)
+.+. .+|+.+|.++++.++++++++...++++++.+|++++..++.+++..+.+++....++.
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~---------- 216 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH---------- 216 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc----------
Confidence 8743 36999999999999999988888888887777777777777777666655432111100
Q ss_pred hccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhhheeccccC
Q 044175 262 ERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFSVTQGAYMD 341 (537)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (537)
....|+|.+..+. ..++++++|++++.+.++....++|..+.|..+....|...++
T Consensus 217 ------------~~~~~ld~a~~~~------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~ 272 (654)
T TIGR00926 217 ------------WPLHWLDYAKDKH------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD 272 (654)
T ss_pred ------------cchhHHHHhcccc------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence 0123444433221 1235678899999999999999999999999998888888777
Q ss_pred CCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh------
Q 044175 342 PQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRR------ 415 (537)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~------ 415 (537)
.+++++.++++.++.++++.++++.|+.++.++|..+|++. ..+++.++.+|++++++++++.+..+..+.
T Consensus 273 ~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~---~ls~l~k~~iG~~la~la~~va~~ve~~~~~~~~~~ 349 (654)
T TIGR00926 273 GDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT---RFTSLRKMAVGGLLAALSFFVAALVQLKVNPTLPEE 349 (654)
T ss_pred CccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 77777888999999999999999999999888887766532 258899999999999999998887664320
Q ss_pred --------------------------------------h-------------h--------------------------h
Q 044175 416 --------------------------------------N-------------A--------------------------F 418 (537)
Q Consensus 416 --------------------------------------~-------------~--------------------------~ 418 (537)
. . .
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (654)
T TIGR00926 350 PSANEIFLQVLNTDCTICDFSVLSKRVLPHDVYLHLDKKNTSGDQGLFTTKSSAKGWTLTYDLSYDGACGLTGNCPKTTD 429 (654)
T ss_pred CCCcceEEEEecCCCCcceEEEEecCCcccccccccCccccccccccccccccccccceEEEEeccccccccCCCCcccc
Confidence 0 0 0
Q ss_pred ----c-------------------------------------------c----------------------------C--
Q 044175 419 ----N-------------------------------------------Q----------------------------M-- 421 (537)
Q Consensus 419 ----~-------------------------------------------~----------------------------~-- 421 (537)
+ + +
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (654)
T TIGR00926 430 AHELEPKISYVLLLSQGGYQLTANTDKPTDAKTEKGMGSVRLVNTLNGEFGMISLCTSDSDSVTPCNPRDPYDFYFRGTK 509 (654)
T ss_pred ceeecCCceEEEEEecCCcceeeeeecCccCCCCCCCceEEEEecCCCcceeeEEecccCcccccCCcccccccccccce
Confidence 0 0 0
Q ss_pred ------------------------C-C------------------------ccchHHHHHHHHHHHHHHHHHHhhhhHHH
Q 044175 422 ------------------------P-P------------------------KQISLFWLSFQYCIFGIADMFTLVGLLEF 452 (537)
Q Consensus 422 ------------------------g-~------------------------~~~~~~~l~~~~~l~g~g~~~~~~~~~~~ 452 (537)
| . ++++.+|+++++.+.++||.+..++..++
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~ 589 (654)
T TIGR00926 510 YPANTCDRIDNAKSSTFLSNQLDMGIYYLIVITENSKIDELQAQIVELVSVNTVSILWQIPQYVILTAGEVLFSVTGLEF 589 (654)
T ss_pred eeeeecccccccccccccccccccceEEEEEEcCCCCCCcceeEEEEecCCCceeHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0 12468999999999999999999999999
Q ss_pred hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhh
Q 044175 453 FYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLY 532 (537)
Q Consensus 453 ~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~ 532 (537)
.++++|+++|+..++++....++|+.+...+...=. . .....-|..++++.++..+++.+
T Consensus 590 ~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~~~~f~~ 649 (654)
T TIGR00926 590 SYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN-------------------F-SVQAAEFFLFASLMLVVMAIFSI 649 (654)
T ss_pred hHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------------------C-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999877665411 0 11233467778888888888888
Q ss_pred hcccC
Q 044175 533 AAAWY 537 (537)
Q Consensus 533 ~~~~y 537 (537)
+++.|
T Consensus 650 ~a~~Y 654 (654)
T TIGR00926 650 LAYFY 654 (654)
T ss_pred HHhcC
Confidence 88877
No 8
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=1.6e-23 Score=215.78 Aligned_cols=384 Identities=10% Similarity=-0.003 Sum_probs=245.8
Q ss_pred chhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHH
Q 044175 7 TIKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCL 86 (537)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~ 86 (537)
++.++...+.++.+.+..++..++.....+.++.|+++++|+|..+.+++.+.+.+...+++++.|+++||+ ||||++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~ 85 (392)
T PRK12382 7 TETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSAL 85 (392)
T ss_pred CcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHH
Confidence 344444556777777888888888777888889899999999999999999999999999999999999995 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 87 IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 87 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
.+.+...++.+........+... ..+...++++|+++|++.+...+...+++.|.+|+++ |++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSA-----------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGK 148 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccch-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cch
Confidence 99888777655433221100000 1266788999999999999988888899999998877 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccC
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKL 246 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 246 (537)
++++...+.++|..++|.+++++.+.+||+..+.+..+..++.. ...+ +.++.+++++.
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~----------------- 207 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFNG-TVRKVPAHAGE----------------- 207 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHHH-hccCCCCCccc-----------------
Confidence 99998888899999999999999888899987665444322221 1111 11111000000
Q ss_pred CCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHh-HHHHHHHHHHHHHh
Q 044175 247 SLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTR-MMPILASTILMNTC 325 (537)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~ 325 (537)
+ + +.. +..|...+ ..........+...
T Consensus 208 ----------------------~----~--~~~------------------------~~~~~~~~~~~~~~l~~~~~~~~ 235 (392)
T PRK12382 208 ----------------------R----P--SLW------------------------SVVGLIWKPGLGLALQGVGFAVI 235 (392)
T ss_pred ----------------------C----c--hHH------------------------HHHHHHHHhHHHHHHHHHHHhHH
Confidence 0 0 000 00011100 00111111111111
Q ss_pred hhhcchhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 044175 326 LAQLQTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMT 405 (537)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~ 405 (537)
.... +.+..+ .+.+ ..........+..++..++..++.+++.+ .+.+..+..+.+++..
T Consensus 236 ~~~~-~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~g~-----------~~~~~~~~~~~~~~~~ 294 (392)
T PRK12382 236 GTFV-SLYFAS-KGWA--------MAGFTLTAFGGAFVLMRVLFGWMPDRFGG-----------VKVAIVSLLVETVGLL 294 (392)
T ss_pred HHHH-HHHHHh-cCCc--------hhHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------CeehHHHHHHHHHHHH
Confidence 1111 111111 1110 01111122333344444555554433322 2334556666666655
Q ss_pred HHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 406 IAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVD 485 (537)
Q Consensus 406 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~ 485 (537)
..... .+.+...+..++.+++.+...+.......+.+|++.||++.|+++....+|+.+++.+.+
T Consensus 295 ~~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 359 (392)
T PRK12382 295 LLWLA---------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAG 359 (392)
T ss_pred HHHHc---------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432 123344556777888888888888888889999999999999999999999999999888
Q ss_pred HhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 486 IINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAW 536 (537)
Q Consensus 486 ~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~ 536 (537)
.+.+. .++...|.+.+++.+++.++.+...|+
T Consensus 360 ~l~~~-------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (392)
T PRK12382 360 MLATS-------------------FGYPSVFLAGAISAVLGIIVTILSFRR 391 (392)
T ss_pred HHHHH-------------------hCchHHHHHHHHHHHHHHHHHHhhccC
Confidence 76532 234556788888888877776655553
No 9
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.6e-23 Score=216.00 Aligned_cols=172 Identities=13% Similarity=0.125 Sum_probs=153.6
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHH
Q 044175 11 KGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (537)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 90 (537)
++.+| ++++..+++.+++++.+.+.++.|+++++|++..+.+.+.+...+...+..+++|+++||+ |||+++..+.+
T Consensus 8 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~ 84 (400)
T PRK11646 8 RNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGML 84 (400)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHH
Confidence 44555 7788999999999999999999999999999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 91 LEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 91 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
+..++.+++.... +.+.+++.|+++|++.+...|...+++.|.+|+++ |++++++
T Consensus 85 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~ 139 (400)
T PRK11646 85 MRAAGFATMAIAH-------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSL 139 (400)
T ss_pred HHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHH
Confidence 9999998887653 67788899999999999888999999999998776 8999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
.+...++|..++|.+++++. .++|++.|++.+...++..+
T Consensus 140 ~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i 179 (400)
T PRK11646 140 LMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAA 179 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 68999999887766554433
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.93 E-value=2.4e-23 Score=214.24 Aligned_cols=374 Identities=13% Similarity=0.021 Sum_probs=238.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+|..++.+.+..++.....+...+. .+.+.+++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGL-LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcc-hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHH
Confidence 3445666666666654444433233 3456789999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+.+..+. +.+.++++|+++|++.+...+...+++.|++|+++ |++++++..
T Consensus 85 ~~~~~~~~~~~-------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~~ 139 (390)
T PRK03545 85 IASHVLSALAW-------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLLA 139 (390)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHHH
Confidence 99998888774 77889999999999999988999999999999877 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCCh
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENP 252 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (537)
...++|..++|.+++.+.+..|||+.|++.++..++..+..+...|+. +++++.. .
T Consensus 140 ~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~----~~~~~~~--------------------~ 195 (390)
T PRK03545 140 TGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL----PSEHSGS--------------------L 195 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC----CCCCcch--------------------H
Confidence 999999999999999998888999999987776555444333322211 1100000 0
Q ss_pred hhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHH-HHHHHHHHHhhhhcch
Q 044175 253 EELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPI-LASTILMNTCLAQLQT 331 (537)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~ 331 (537)
++ ..+ .-..+........ .......+........
T Consensus 196 ---------------------~~--~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (390)
T PRK03545 196 ---------------------KS--LPL----------------------LFRRPALVSLYLLTVVVVTAHFTAYSYIEP 230 (390)
T ss_pred ---------------------HH--HHH----------------------HHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000 0000111111111 1111111111111111
Q ss_pred hhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044175 332 FSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVE 411 (537)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~ 411 (537)
+.....+.+.. ..+.......+..++...+..++. +|+ + .+.+..+..+..++.......
T Consensus 231 -~l~~~~g~s~~------~~~~~~~~~~~~~~~g~~~~g~l~----dr~-------~-~~~~~~~~~~~~~~~~~l~~~- 290 (390)
T PRK03545 231 -FVQQVAGLSEN------FATLLLLLFGGAGIIGSVLFSRLG----NRH-------P-SGFLLIAIALLLVCLLLLLPA- 290 (390)
T ss_pred -HHHHhcCCCcc------HHHHHHHHHHHHHHHHHHHHHHHh----hcc-------c-hhHHHHHHHHHHHHHHHHHHH-
Confidence 11111111111 112222223334444444444433 332 1 123444544444444333221
Q ss_pred HHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044175 412 VQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVT 491 (537)
Q Consensus 412 ~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~ 491 (537)
..+.+.++...++.|++.+...+.......+..| +.|+.++|+.+....+|..+|+.+.+.+.+.
T Consensus 291 -------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~- 355 (390)
T PRK03545 291 -------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLH- 355 (390)
T ss_pred -------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 1233445556677788877777777788888877 5789999999999999999999999876632
Q ss_pred ccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 492 KRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 492 ~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.++...|+..+.+.+++.++.+...|
T Consensus 356 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 356 ------------------LGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred ------------------cChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 23445677878888888777766655
No 11
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=8.2e-23 Score=210.96 Aligned_cols=378 Identities=11% Similarity=0.022 Sum_probs=246.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
.+|.+..+.+..+...++.....+.++.|+++++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.+++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 445677788888999999888888999999999999999999999999999999999999999995 9999999999998
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+.+..+....+.. ..+...+++.|+++|++.+...+...+++.|..|+++ |++++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 154 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWP-----------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNG 154 (399)
T ss_pred HHHHHHHHHhhhhhccc-----------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhh
Confidence 88777665542111100 0145678999999999999999999999999998877 889999888
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCCh
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENP 252 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (537)
.+.++|..++|.+++++.+..||+..+++..+..++..+.. ++ .+++++++++
T Consensus 155 ~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~----------------------- 207 (399)
T PRK05122 155 IATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RP-RPAVPPVKGE----------------------- 207 (399)
T ss_pred hhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hc-CCCCCCCCcc-----------------------
Confidence 88899999999999999888999988876555433222211 11 1110000000
Q ss_pred hhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHh-HHHHHHHHHHHHHhhhhcch
Q 044175 253 EELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTR-MMPILASTILMNTCLAQLQT 331 (537)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 331 (537)
+.++. +..|+... ..........+....... .
T Consensus 208 ----------------------~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 240 (399)
T PRK05122 208 ----------------------RLPFR------------------------RVLGRVWPYGMGLALASIGFGTIATFI-T 240 (399)
T ss_pred ----------------------chhHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 00000 00111100 001111111111111111 1
Q ss_pred hhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044175 332 FSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVE 411 (537)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~ 411 (537)
.+..+ .+.+ ..+.......+..++..+...++. +|. ++.+.+..+..+.+++.......
T Consensus 241 ~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~----~r~-------~~~~~~~~~~~~~~~~~~~~~~~- 299 (399)
T PRK05122 241 LYYAA-RGWD--------GAALALTLFGVAFVGARLLFGNLI----NRL-------GGLRVAIVSLLVEILGLLLLWLA- 299 (399)
T ss_pred HHHHH-cccc--------cchHHHHHHHHHHHHHHHHHHHHH----HHh-------ccHHHHHHHHHHHHHHHHHHHHh-
Confidence 11111 1110 011111222333334444444433 232 23344556666666666555442
Q ss_pred HHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044175 412 VQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVT 491 (537)
Q Consensus 412 ~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~ 491 (537)
.+.+..++..++.|++.+...+.......+..|++.||++.|+++....+|..+++.+.+.+.+.
T Consensus 300 --------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~- 364 (399)
T PRK05122 300 --------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASW- 364 (399)
T ss_pred --------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 13344555678888888888888778888999999999999999999999999888887765421
Q ss_pred ccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 492 KRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAW 536 (537)
Q Consensus 492 ~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~ 536 (537)
.+++..|++.+++++++.+..+.+.++
T Consensus 365 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 365 ------------------FGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred ------------------cCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 235566777777777777666655444
No 12
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.5e-23 Score=215.87 Aligned_cols=175 Identities=13% Similarity=0.098 Sum_probs=153.3
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
+.+|+++.+.+..++..++++.+.++++.|+++++|++..+.+++.+.+.+...++.++.|+++||+ |||+++.++.++
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 4678889999999999999999999999999999999999999999999999999999999999995 999999999998
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++.+.+ +...+++.|.+.+.+.+...+...+..+|.+|+++ |++.+++.
T Consensus 83 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~ 137 (395)
T PRK10054 83 FASGFIAIPLVN-------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSLN 137 (395)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHHH
Confidence 888888777764 56677778888888878888888999999998766 89999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
+...++|.+++|.+++++.. .+|+..|.+.++..++..+..
T Consensus 138 ~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 138 YTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999998875 689999998777666554433
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=7e-23 Score=211.95 Aligned_cols=174 Identities=14% Similarity=0.144 Sum_probs=145.8
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHH
Q 044175 11 KGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (537)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 90 (537)
|.+|..+.......+++....+......+ .+.+++|+++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 34555666666677777776665555444 55678999999999999999999999999999999995 99999999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 91 LEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 91 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
+..++.+++.++. +...+++.|+++|++.+...+...+++.|.+|+++ |++++++
T Consensus 89 ~~~~~~~~~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 143 (406)
T PRK11551 89 LFGLFSLATAQAW-------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVSL 143 (406)
T ss_pred HHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 8888887777663 67788999999999999999999999999998777 8999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
.+...++|..+++.+++.+.+..+|+..|++.++..++..+
T Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 144 MYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888999999887655444433
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=5.1e-23 Score=218.25 Aligned_cols=398 Identities=12% Similarity=0.038 Sum_probs=237.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
|..+..+++..++..+..-.+.+.+|. +.+++|.+..+.+|+.+.+.++...+.++.|+++||+ |||+++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~-i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPT-LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 445566666666666665555555554 4678999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCC-CCChhhhhhhhhHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFD-EKDPKGAKALASYFNYFL 172 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~ 172 (537)
+++++++.+. +.+.++++|+++|+|.+...|.....+.+.++ +++ |+++++++.
T Consensus 83 ~~~~~~~~a~-------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g~~~ 137 (495)
T PRK14995 83 LASLAAAFSP-------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALGVWA 137 (495)
T ss_pred HHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHHHHH
Confidence 9999998874 78899999999999999988888887877764 344 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHH------HHHHHHHhccC
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQ------VVVVAIKNRKL 246 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~~~~ 246 (537)
...++|..++|.+++++.++.|||+.|++...+.++.+++.....++.+++++++.+...... .+....++..
T Consensus 138 ~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~- 216 (495)
T PRK14995 138 AVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL- 216 (495)
T ss_pred HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc-
Confidence 999999999999999999999999999998776665554444433332211111111111000 0011111100
Q ss_pred CCCCChh-hhhhh--hhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHH
Q 044175 247 SLPENPE-ELYEI--NEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMN 323 (537)
Q Consensus 247 ~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 323 (537)
+...+.. ..... ... ....+..... +. ...-.+++.+. .+.+........+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~------------~l~~f~~~e~-~~--~~p~~~~~lf~------~~~~~~~~~~~~~~~~~~ 275 (495)
T PRK14995 217 KGFLSLWVTSLTLLTGAL------------LLGLFIRTQL-AA--SRPMIDMRLFT------HRIILSGVVMAMTAMITL 275 (495)
T ss_pred ccCCchHHHHHHHHHHHH------------HHHHHHHHHh-cC--CCCCcCHHHhC------CcccHHHHHHHHHHHHHH
Confidence 0000000 00000 000 0000000000 00 00000111110 011111111111111001
Q ss_pred HhhhhcchhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHH
Q 044175 324 TCLAQLQTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVS 403 (537)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~ 403 (537)
.....+.+.+.+...+.+. ...+.......+...+..++..++.+ |. ++.+.+..|.++.+++
T Consensus 276 ~~~~~~~~~~lq~v~g~s~------~~ag~~~~~~~~~~~~~~~~~g~l~~----r~-------g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 276 VGFELLMAQELQFVHGLSP------LEAGMFMLPVMVASGFSGPIAGILVS----RL-------GLRLVATGGMALSALS 338 (495)
T ss_pred HHHHHHHHHHHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHH----Hc-------CchHHHHHHHHHHHHH
Confidence 1111111111111111111 11122222334445555566665443 32 2223456677777776
Q ss_pred HHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 044175 404 MTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVF 483 (537)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l 483 (537)
......... ..+.+......++.|+|.+...+.....+.+..|++.++.+.++.++..++|..+|+.+
T Consensus 339 ~~~l~~~~~------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 339 FYGLAMTDF------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred HHHHHHhcC------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 655443210 12333445567888999999999899999999999999999999999999999999998
Q ss_pred HHHhhh
Q 044175 484 VDIINA 489 (537)
Q Consensus 484 ~~~i~~ 489 (537)
.+.+.+
T Consensus 407 ~g~i~~ 412 (495)
T PRK14995 407 FGLLLS 412 (495)
T ss_pred HHHHHH
Confidence 887653
No 15
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.92 E-value=1.5e-24 Score=221.43 Aligned_cols=365 Identities=27% Similarity=0.435 Sum_probs=236.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhh
Q 044175 82 FATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGA 161 (537)
Q Consensus 82 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 161 (537)
.|++.++.+++.+|.+++.++...+...+ ..+...++++..++++|.|+.+|++.++++||++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~~----------~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~--- 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLPS----------GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD--- 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhhh----------hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---
Confidence 37899999999999999888765333211 23567899999999999999999999999999997742
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccccccc-CCCCCchhh-HHHHHHH
Q 044175 162 KALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQ-QPGESPLVR-VSQVVVV 239 (537)
Q Consensus 162 ~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-v~~~~~~ 239 (537)
.+|.+.++++|++.|+|+.+++.+.+++.+++||.+.|.++.+.++++++.++..++++++. +|++.+..+ ...+...
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 147 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA 147 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence 33899999999999999999999999999999999999999999999999999998888777 666666666 3333344
Q ss_pred HHHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCccc-ccchhHHHHHHHHhHHHHHHH
Q 044175 240 AIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRV-CTLTQVEEVKILTRMMPILAS 318 (537)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 318 (537)
..++.....|....+.....+...+.... ......+....... ....|.. +..+++++.+.+.+.++.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 219 (372)
T PF00854_consen 148 AFKKRKLAVPKGSSWLDWALFQYSERSIF-----GIIVFIRAAVIFFP---EIFFWALFCQVQRVEELKALIRFLPIFLF 219 (372)
T ss_dssp HHHHHCCCH-HHHHHHHHHHHHHCCCCCC-----CCCCHHHHHHHHCC---CHHHHTTTSSTTTHHHCCHHHCHHHCCCH
T ss_pred HHHHhhcccccchHHHHHhhhhhhhhhhh-----hhhhhccchhhhhh---hhhhcccCCccceeeeeeeeeeccccCeE
Confidence 44444443332222222221111000000 00001110000000 0001111 223445666777777777777
Q ss_pred HHHHHHhhhhcchhhheeccccCCCCCc-cccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHH
Q 044175 319 TILMNTCLAQLQTFSVTQGAYMDPQLGS-IKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGL 397 (537)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~ 397 (537)
.+.++....+.......+...++....+ +.+|++.+++++++.++++.|+.+++.+|+.++.. .++...++.+|+
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~----~~~~~~k~~~G~ 295 (372)
T PF00854_consen 220 WIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGI----QPSPPQKFGIGM 295 (372)
T ss_dssp HHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHHHHH-
T ss_pred EEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcc----cchhhhhhhHHH
Confidence 7777777777777666777667666666 78999999999999999999999999999887322 358999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHH
Q 044175 398 VLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSL 473 (537)
Q Consensus 398 ~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~ 473 (537)
+++.++++.....+..+......++ ..+.+|.++.+++..++|.+..+.+.+..+|.+|++..+..+|++....
T Consensus 296 ~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 296 VFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 9999999988877765443333332 2344777799999999999999999997777777777777777766544
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=2.2e-22 Score=206.38 Aligned_cols=154 Identities=13% Similarity=0.141 Sum_probs=135.9
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
....+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..++..+.
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 80 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG------------ 80 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc------------
Confidence 4444567889999999999999999999999999999999995 999999999999999998888763
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
+.+.++++|+++|++.+...+...+++.|.+|+++ |++.+++.....++|..++|.+++++.+..+|
T Consensus 81 -------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 147 (399)
T TIGR00893 81 -------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSW 147 (399)
T ss_pred -------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc
Confidence 67889999999999999999999999999999776 89999999999999999999999998888899
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 044175 196 WGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~ 215 (537)
++.|++.++..++..+..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 148 QWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhh
Confidence 99998877665554444433
No 17
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=1.2e-21 Score=212.59 Aligned_cols=155 Identities=10% Similarity=0.072 Sum_probs=129.9
Q ss_pred HHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 044175 35 AISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCG 114 (537)
Q Consensus 35 ~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 114 (537)
.....+.+.+++|++..+.+++.+++.++..++.+++|+++||+ |||+++++++++..++.++++++.
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~----------- 253 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ----------- 253 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44555677788999999999999999999999999999999995 999999999999999988888764
Q ss_pred CCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc--
Q 044175 115 KSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE-- 192 (537)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~-- 192 (537)
+...++++|+++|+|.|+..+...++++|.+|.+. |++.+++......+|.++++.++.++...
T Consensus 254 --------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 254 --------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 67889999999999999999999999999999776 88999988888889998888776554322
Q ss_pred -----------ccchHHHHHHHHHHHHHHHHHHh
Q 044175 193 -----------KAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 193 -----------~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.+||+.|++.++..++.++..++
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 36898888877665555444433
No 18
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.91 E-value=8.8e-22 Score=200.16 Aligned_cols=153 Identities=12% Similarity=0.000 Sum_probs=121.4
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
....+.+++++|+++.+.+++.+.+.+++.++.++.|+++||+ |||+++..+......+. +.....
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~-~~~~~~------------ 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAA-GRLLDP------------ 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHH-HHHHHh------------
Confidence 4444566789999999999999999999999999999999995 99988765544444433 222321
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
.+...++++|+++|+|.|.. +.....++|++|+++ |++++++...+..+|..+++.+++++.+++||
T Consensus 77 ------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW 143 (368)
T TIGR00903 77 ------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYTAGGL 143 (368)
T ss_pred ------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccch
Confidence 26788999999999999864 555566789999776 99999999999999999999999999989999
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 044175 196 WGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~ 215 (537)
|..|++.+++.++..++++.
T Consensus 144 r~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 144 QLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99998866655444444433
No 19
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1e-21 Score=207.37 Aligned_cols=179 Identities=10% Similarity=0.045 Sum_probs=153.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+.+.++.+.+..++..+..+.+.+.++.+.+ ++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 85 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLF 85 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 3456788888888888888888888887764 6999999999999999999999999999999995 9999999998888
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+++..+. +...++++|+++|++.|...|...+.+.|.+|+++ |+++++...
T Consensus 86 ~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 140 (471)
T PRK10504 86 TLGSLFCALSG-------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHhC-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 88888776653 66788899999999999999999999999998665 888999998
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccc
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
...++|..++|.+++++.+..+|++.|.+..+...+..+......+
T Consensus 141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999999999999999899999999887766555544444333
No 20
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=1e-21 Score=203.38 Aligned_cols=177 Identities=12% Similarity=0.040 Sum_probs=147.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
.+|+.+..+.+..+++......+... .+.+++++|++..+.+++.+++.++..++.++.|+++||+ ||||++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~ 82 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFA-GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL 82 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHH-HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence 35666666666666666655544444 4478899999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.++++++. +...+++.|+++|++.|...|....+++|++|+++ |++.++++
T Consensus 83 ~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~ 137 (412)
T TIGR02332 83 WGIASTATMFAT-------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALF 137 (412)
T ss_pred HHHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 999999988864 67889999999999999999999999999999776 89999999
Q ss_pred HHHHHHHHHHHHHHHhhhcc------cccchHHHHHHHHHHHHHHHHHHh
Q 044175 172 LLTTTLAAVIGVTAIVYVST------EKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~------~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.....+|..+++.+++++.+ ..|||+.|++.++..++..++.++
T Consensus 138 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 138 MIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999988753 369999999877665544443333
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=6.8e-22 Score=206.29 Aligned_cols=164 Identities=10% Similarity=0.032 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 044175 19 FIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (537)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l 98 (537)
..++..++..+..+.....++.+ .+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 104 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINIL 104 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHH
Confidence 33444444444434444555544 467999999999999999999999999999999995 9999999999999999988
Q ss_pred HHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 044175 99 ITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLA 178 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (537)
+..+. +...+++.|++.|++.|...+...++++|++|+++ |++++++.+.+.++|
T Consensus 105 ~~~~~-------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g 159 (434)
T PRK11663 105 FGFSS-------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNVG 159 (434)
T ss_pred HHHHh-------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHHH
Confidence 88764 67788889999999999999999999999999777 899999999999999
Q ss_pred HHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 179 AVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
..++|.+++++.+.+|||+.|.+.++..++.
T Consensus 160 ~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 160 GALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999988899999998877654433
No 22
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.91 E-value=4.4e-22 Score=202.23 Aligned_cols=358 Identities=11% Similarity=0.037 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 044175 19 FIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (537)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l 98 (537)
.+....++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+.++..++.++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 3556667777777666777777765 5899999999999999999999999999999995 9999999999988888877
Q ss_pred HHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 044175 99 ITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLA 178 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (537)
.......+ ..+.+.++++|+++|++.+...+...+++.|.+|+++ |++.+++...+.++|
T Consensus 81 ~~~~~~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g 140 (365)
T TIGR00900 81 LPFVALLG--------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLF 140 (365)
T ss_pred HHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHH
Confidence 77653211 1267889999999999999999999999999999776 899999999999999
Q ss_pred HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhh
Q 044175 179 AVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEI 258 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (537)
..++|.+++++.+..+|+..|++.++..++..+..+..+.+.+++ +++++.+ ++ . .+
T Consensus 141 ~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------------~~--~-~~- 197 (365)
T TIGR00900 141 YIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALS------------------NA--V-LR- 197 (365)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccc------------------hh--H-HH-
Confidence 999999999998888999999887765554444333322111100 0000000 00 0 00
Q ss_pred hhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHH-HHHHHHHHHhhhhcchhhheec
Q 044175 259 NEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPI-LASTILMNTCLAQLQTFSVTQG 337 (537)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~ 337 (537)
+..+ .++ +....+.+...... ......+........+.+..+.
T Consensus 198 ------------------~~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (365)
T TIGR00900 198 ------------------DTRE-------------GIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKY 241 (365)
T ss_pred ------------------HHHh-------------HHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 0000 000 00000111111111 1111111111111112221111
Q ss_pred cccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 338 AYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNA 417 (537)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~ 417 (537)
.+.+. ...+.......+..++..++..++. +|. ++.+.+..+..+.+++........
T Consensus 242 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~l~----~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------ 298 (365)
T TIGR00900 242 LGRGS------THYGWVLAAFGLGALLGALLLGLLG----RYF-------KRMALMTGAIFVIGLAILVVGLTP------ 298 (365)
T ss_pred hCCch------HHHHHHHHHHHHHHHHHHHHHHHHH----HHh-------chhHHHHHHHHHHHHHHHHHHhhc------
Confidence 11111 1112222333344444444444322 232 233444555555566555544421
Q ss_pred hccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044175 418 FNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 418 ~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~ 488 (537)
+ +.+......++.+++.....+...++..+.+|++.|+++.|+.+....++..+++.+.+.+.
T Consensus 299 -------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 299 -------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred -------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 24555667788899999999999999999999999999999999999999999999888765
No 23
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=3.1e-22 Score=202.41 Aligned_cols=166 Identities=22% Similarity=0.282 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMIT 100 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~ 100 (537)
++..++..++.....+.++.++.+++|.+..+.+++.+.+.+...++.++.|+++||+ ||||++..+.++.+++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4556667777766667777688899999999999999999999999999999999995 999999999999999966555
Q ss_pred HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 044175 101 VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAV 180 (537)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (537)
++. +.+.++++|++.|++.+...+...+++.|.+|+++ |++.++....+.++|..
T Consensus 81 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~ 135 (352)
T PF07690_consen 81 FAS-------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI 135 (352)
T ss_dssp HHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred hhh-------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence 542 45589999999999999999999999999999888 99999999999999999
Q ss_pred HHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 181 IGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 181 i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
++|.+++++.+..+|++.|++.++..++..++
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhccccccccccccchhhhhhhh
Confidence 99999999998889999999988877666554
No 24
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.91 E-value=9.3e-22 Score=203.58 Aligned_cols=385 Identities=13% Similarity=0.071 Sum_probs=239.8
Q ss_pred CCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh-----HHHHHHHHHHHHHHHhhHhHHHhhhccchhHHH
Q 044175 12 GGFR-ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAG-----ASNTLTNLMGSTFLLCLVGGFISDTFLSRFATC 85 (537)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~ 85 (537)
.+|+ ....+.+..++..+++....+.++.|++ ++|.+..+ .+.+.+.+.+...++.++.|+++||+ |||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~ 87 (408)
T PRK09874 10 INWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIML 87 (408)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHH
Confidence 3444 4666677888888888888888888875 58888655 37888899999999999999999995 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhh
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
..+.++..++.+++.... +.+.+++.|++.|++.+ ..+....++.|.+|+++ |+
T Consensus 88 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~ 141 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQ-------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SG 141 (408)
T ss_pred HHHHHHHHHHHHHHHHHh-------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hh
Confidence 999998888888777653 67788999999999865 45777788889988766 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhcc
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRK 245 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 245 (537)
++.++.....++|..++|.+++.+.+..+|+..|++.++..++..+..+...++.++ +.+++...
T Consensus 142 ~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------------- 206 (408)
T PRK09874 142 WALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ--PVSKKEML------------- 206 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhh-------------
Confidence 999998888999999999999999888899999988776655544433332221110 00000000
Q ss_pred CCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHh
Q 044175 246 LSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTC 325 (537)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 325 (537)
+. + +..+. . .+.+ ...... .....+...
T Consensus 207 -----~~----~-------------------~~~~~--~-------------------~~~~-~~~~~~--~~~~~~~~~ 234 (408)
T PRK09874 207 -----HM----R-------------------EVVTS--L-------------------KNPK-LVLSLF--VTTLIIQVA 234 (408)
T ss_pred -----HH----H-------------------HHHHh--C-------------------cCCc-hHHHHH--HHHHHHHHH
Confidence 00 0 00000 0 0000 101010 000111111
Q ss_pred hhhcchhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 044175 326 LAQLQTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMT 405 (537)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~ 405 (537)
.....+.+..+...............+.+..+..+..++..+...++.+++. +.+.+..+..+..++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g-----------~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 235 TGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIG-----------PEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------cchhHHHHHHHHHHHHH
Confidence 1111111111100000000000000111112223334444455555443332 22334455555555444
Q ss_pred HHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 406 IAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVD 485 (537)
Q Consensus 406 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~ 485 (537)
..... .+.+.+....++.|++.+...|...+...+..|++.+|+..++.+....+|..+++.+.+
T Consensus 304 ~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G 368 (408)
T PRK09874 304 PMSFV---------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGA 368 (408)
T ss_pred HHHHh---------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHH
Confidence 43332 123444455677888888889999999999999999999999999999999999999988
Q ss_pred HhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 486 IINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAW 536 (537)
Q Consensus 486 ~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~ 536 (537)
.+.+. .++...|++.+++.+++.+..+...+|
T Consensus 369 ~l~~~-------------------~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 369 AISAN-------------------YGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHhh-------------------cchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76521 234567888888888877766654443
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=9.1e-22 Score=203.06 Aligned_cols=175 Identities=14% Similarity=0.149 Sum_probs=150.3
Q ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHH
Q 044175 8 IKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 87 (537)
+..+.+|+.+....+..+.+.+..+......+ .+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~ 82 (405)
T TIGR00891 5 HLTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVT 82 (405)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHH
Confidence 34456778888888888888888776655555 56788999999999999999999999999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhH
Q 044175 88 FGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASY 167 (537)
Q Consensus 88 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 167 (537)
+.++..++.+++..+. +...+++.|++.|++.+...+...+++.|.+|+++ |+++
T Consensus 83 ~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~ 137 (405)
T TIGR00891 83 SIVLFSAGTLACGFAP-------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKA 137 (405)
T ss_pred HHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHH
Confidence 9999999988887763 67888999999999999999999999999999877 8999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccc--chHHHHHHHHHHHHH
Q 044175 168 FNYFLLTTTLAAVIGVTAIVYVSTEKA--WWGGFLISSIVTFIG 209 (537)
Q Consensus 168 ~~~~~~~~~~g~~i~~~~~~~l~~~~g--~~~~f~i~~~~~~~~ 209 (537)
.++.....++|..+++.+++.+.+..+ |++.|.+.++..++.
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~ 181 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA 181 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 999999999999999999988877665 999998765544433
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.91 E-value=2.4e-21 Score=199.51 Aligned_cols=174 Identities=10% Similarity=0.094 Sum_probs=148.1
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 10 QKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
.|..|+.+..+....++.....|.....++. +.+++|+++.+.++..+.+.+...++.++.|+++||+ ||||++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 3456776666666656566666655556655 4568999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
++..++.+++.++. +.+.+++.|+++|++.|...+...+++.|++|+++ |+++.+
T Consensus 93 ~~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~ 147 (394)
T PRK10213 93 VLLTLSCLLVSFAN-------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALS 147 (394)
T ss_pred HHHHHHHHHHHHHC-------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHH
Confidence 99999988887763 78899999999999999999999999999998777 899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHH
Q 044175 170 YFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~ 210 (537)
....+.++|..++|.+++++.+.+|||+.|++.++..++..
T Consensus 148 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 148 VIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998999999988766544433
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=4.6e-21 Score=198.44 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=138.6
Q ss_pred CcchHHHHHHHHHHHHHHH---HHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGF---IANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
+.+..+..++..+.+...+ ....+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||++.++.
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~ 85 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV 85 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence 4444555554444444433 333344443 5578999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
.+..++.+++..+. +...+++.|+++|++.+...+...+.+.|.+|+++ |.+..+
T Consensus 86 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~ 140 (406)
T PRK15402 86 AFFILTCLAILLAQ-------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA 140 (406)
T ss_pred HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence 99999888877763 66788899999999999888888999999998776 777788
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 170 YFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
.......+|..++|.+++++.+..+|++.|++.++..++..+..
T Consensus 141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 87777788999999999999888899999988776655554433
No 28
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.90 E-value=1.6e-21 Score=202.52 Aligned_cols=356 Identities=13% Similarity=0.077 Sum_probs=220.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
....+++..++..++........+.+. ++++.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+.++..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLG 95 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHH
Confidence 344555566777776655555566555 56788999999999999999999999999999995 9999999998888877
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++....... ..+...+++.|++.|++.+...+...+.+.|..|+++ |+++.++.+...
T Consensus 96 ~~~~~~~~~~~--------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 155 (417)
T PRK10489 96 FIGLALNAFLP--------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTV 155 (417)
T ss_pred HHHHHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHH
Confidence 76654321000 1256778889999999988888888899999988766 888899988899
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhh
Q 044175 176 TLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEEL 255 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (537)
++|..++|.+++++.+..+|++.|.+.++..++..+..+..++ . ++++++.. +..+
T Consensus 156 ~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~---~~~~~~~~------------------~~~~-- 211 (417)
T PRK10489 156 RLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA-L---PPPPQPRE------------------HPLR-- 211 (417)
T ss_pred hHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC-C---CCCCcccc------------------cchH--
Confidence 9999999999999888889999998877665554444332211 1 11000000 0000
Q ss_pred hhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhhhe
Q 044175 256 YEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFSVT 335 (537)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 335 (537)
+..+. ++ .+...+.+ +...+..+..........+.+.+..
T Consensus 212 ---------------------~~~~~-------------~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~ 251 (417)
T PRK10489 212 ---------------------SLLAG-------------FR-----FLLASPVV-GGIALLGGLLTMASAVRVLYPALAD 251 (417)
T ss_pred ---------------------HHHHH-------------HH-----HHHcChHH-HHHHHHHHHHHHHHhHHHhhHHHHH
Confidence 00000 00 00000111 1111111111101111111111211
Q ss_pred eccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 336 QGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRR 415 (537)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~ 415 (537)
+..+.+. ...+.+.....+..++...+..++. +|. ++.+.+..+.++.+++++.....
T Consensus 252 ~~~g~~~------~~~g~~~~~~~~g~~ig~~~~~~l~----~~~-------~~~~~l~~~~~~~~~~~~~~~~~----- 309 (417)
T PRK10489 252 EVWQMGA------AQIGLLYAAVPLGAALGALTSGWLA----HSA-------RPGLLMLLSTLGSFLAVGLFGLM----- 309 (417)
T ss_pred hccCCCh------hHhHHHHHHHHHHHHHHHHHHHHhh----hcc-------CcchHHHHHHHHHHHHHHHHHcc-----
Confidence 1111111 1122233333444444444444422 221 22234555666666665554432
Q ss_pred hhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 416 NAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINA 489 (537)
Q Consensus 416 ~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~ 489 (537)
.+.+......++.|++.+...+...++..+..|++.||++.|+.+....+|..+++.+.+.+.+
T Consensus 310 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 310 ----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 2334445566777888777777888899999999999999999999999999999999997764
No 29
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.90 E-value=8e-22 Score=208.90 Aligned_cols=396 Identities=11% Similarity=0.051 Sum_probs=234.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
+..+....++..+...... ...+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 3444555555555544444 444556678999999999999999999999999999999995 99999999999999999
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
+++..+. +...++++|+++|++.+...+...+++.|.+|+++ |+++++++.....
T Consensus 82 ~~~~~~~-------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 136 (485)
T TIGR00711 82 LLCGVAP-------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVL 136 (485)
T ss_pred HHHhCcC-------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHH
Confidence 8888763 67889999999999999999999999999999776 8999999999999
Q ss_pred HHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHH--------HHHHHHhccCCC
Q 044175 177 LAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQV--------VVVAIKNRKLSL 248 (537)
Q Consensus 177 ~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--------~~~~~~~~~~~~ 248 (537)
+|..++|.+++++.++++||+.|++..+..++..+..++..++.+++ ++++.+..... +.....+.+...
T Consensus 137 ~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~ 214 (485)
T TIGR00711 137 VAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERG 214 (485)
T ss_pred HHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 99999999999999999999999987766555544443333321111 11111111110 001111111000
Q ss_pred CCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHh-HHHHHHHHHHHHHhhh
Q 044175 249 PENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTR-MMPILASTILMNTCLA 327 (537)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~ 327 (537)
..++.......-... .....+..+.. +.+ .+..+++.+. .+.+.. .+........++...
T Consensus 215 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 275 (485)
T TIGR00711 215 WFDSNEILILSITGL---------VAIIAFVVWEL-TDD--NPLVDLRLFK------YRNFTIGCVYMSLLGLGLYGSF- 275 (485)
T ss_pred CCCchHHHHHHHHHH---------HHHHHHHHHHH-cCC--CCccCHHHHc------CCChHHHHHHHHHHHHHHHHHH-
Confidence 000000000000000 00000000000 000 0000010000 011111 111111111111111
Q ss_pred hcchhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 044175 328 QLQTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIA 407 (537)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~ 407 (537)
.+.+.+.....+.+. ...+.......+..++..++..++.+++ ++.+.+..|..+.+++....
T Consensus 276 ~~~p~~~~~~~g~s~------~~~g~~~~~~~~~~~~~~~~~g~l~~r~-----------~~~~~~~~g~~~~~~~~~~~ 338 (485)
T TIGR00711 276 YLLPLYLQQVLGYTA------LQAGLHILPVGLAPMLSSPIAGRMGDKI-----------DPRKLVTIGLILYAVGFYWR 338 (485)
T ss_pred HHHHHHHHHhcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------CcHHHHHHHHHHHHHHHHHH
Confidence 111212111111111 1112233334455555666666544332 23344666777777666554
Q ss_pred HHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 408 GFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDII 487 (537)
Q Consensus 408 ~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i 487 (537)
.... . ...+.+......++.|+|.+...+.....+.+..|++.++.++|+.+..+.+|+.+|+.+.+.+
T Consensus 339 ~~~~------~-----~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 339 AFTF------T-----PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTI 407 (485)
T ss_pred hccC------C-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4210 0 0134445555678889999888888888888999999999999999999999999999887766
Q ss_pred h
Q 044175 488 N 488 (537)
Q Consensus 488 ~ 488 (537)
.
T Consensus 408 ~ 408 (485)
T TIGR00711 408 L 408 (485)
T ss_pred H
Confidence 5
No 30
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.90 E-value=5.5e-21 Score=199.37 Aligned_cols=170 Identities=15% Similarity=0.118 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcC---CchhhHHHHHHHH---HHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMH---FNLAGASNTLTNL---MGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~---~~~~~~~~~~~~~---~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
..+..+++.+.+.. .++..+++.++++ .+..+.+.+...+ .++..++.+++|+++||+ ||||++.++.+++.
T Consensus 27 ~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~ 104 (432)
T PRK10406 27 ASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMC 104 (432)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHH
Confidence 33445666666544 5666678888874 4555444444444 444558999999999995 99999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++++++++++.+.... ..+...+++.|+++|+|.|+..|...++++|.+|+++ |++..+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~ 167 (432)
T PRK10406 105 FGSLVIACLPGYETIG-----------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYV 167 (432)
T ss_pred HHHHHHhhcCCchhHH-----------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHH
Confidence 9999988764211000 0123568899999999999999999999999999887 8888888877
Q ss_pred HHHHHHHHHHHHHhhhc--------ccccchHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVS--------TEKAWWGGFLISSIVTFI 208 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~--------~~~g~~~~f~i~~~~~~~ 208 (537)
..+.|..+++.+...+. ..+|||.+|++.++..++
T Consensus 168 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll 210 (432)
T PRK10406 168 TLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVV 210 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH
Confidence 77888887776654443 257999999987665443
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.90 E-value=8.4e-22 Score=207.65 Aligned_cols=148 Identities=14% Similarity=0.042 Sum_probs=129.8
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchh
Q 044175 45 EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIA 124 (537)
Q Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (537)
++|++..+.+.+.+.+.+++.++.+++|+++||+ |||+++..+.++..++.+++..+.. .+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 131 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-----------------GGI 131 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH-----------------cCc
Confidence 6899999999999999999999999999999995 9999999999999988887765431 245
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc-cchHHHHHHH
Q 044175 125 AYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK-AWWGGFLISS 203 (537)
Q Consensus 125 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~-g~~~~f~i~~ 203 (537)
..+++.|+++|++.+...|....+++|++|+++ |+++.++...+.++|..++|.+++++.+.+ +|+..|++.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 678999999999999999999999999999877 999999999999999999999999998884 9999999887
Q ss_pred HHHHHHHHHHHhc
Q 044175 204 IVTFIGFIALVIG 216 (537)
Q Consensus 204 ~~~~~~~~~~~~~ 216 (537)
+..++..+.++..
T Consensus 206 ~~~~~~~~~~~~~ 218 (465)
T TIGR00894 206 IVGCAWSLLWFVF 218 (465)
T ss_pred HHHHHHHHHHHHH
Confidence 7666555555443
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.90 E-value=6.4e-22 Score=201.85 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 044175 31 FIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHP 110 (537)
Q Consensus 31 ~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 110 (537)
.|. .+...+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++.++.
T Consensus 19 ~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------- 89 (377)
T TIGR00890 19 VYT-WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------- 89 (377)
T ss_pred Hhh-hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH-------
Confidence 443 34556778889999999999999999999999999999999995 999999999999999998888874
Q ss_pred CCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 044175 111 PDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVS 190 (537)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~ 190 (537)
+...++++|++.|++.|...+.....+.|.+| ++ |+++.++.....++|..+++.+.+.+.
T Consensus 90 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (377)
T TIGR00890 90 ------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLITSVI 150 (377)
T ss_pred ------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHHHHH
Confidence 67889999999999999888888888888886 34 788888888888899887666666666
Q ss_pred ccccchHHHHHHHHHHHHHHHHH
Q 044175 191 TEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 191 ~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
+..+||+.|++.++..++..+..
T Consensus 151 ~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 151 NLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred hcccHHHHHHHHHHHHHHHHHHH
Confidence 77899999998777665554443
No 33
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=4.1e-21 Score=196.96 Aligned_cols=177 Identities=14% Similarity=0.072 Sum_probs=147.8
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
++++.++.+.+..+...++.....+..+ .+.+++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~ 79 (385)
T TIGR00710 2 SAKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFI 79 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 3455566666666666666555555554 45678999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++..+. +...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.
T Consensus 80 ~~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 134 (385)
T TIGR00710 80 FALSSLGLALSN-------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSIL 134 (385)
T ss_pred HHHHHHHHHHHc-------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHH
Confidence 999988887763 67788999999999999999999999999999776 89999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
+....+|..++|.+++++.+..+|+..|++.++..++..+..+.
T Consensus 135 ~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 135 MPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988889999998877665555444433
No 34
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=8.9e-21 Score=188.21 Aligned_cols=182 Identities=14% Similarity=0.097 Sum_probs=163.5
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 10 QKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
.+..|..++.+.+..|+-...-+.....++.- .+++|.|..++|++++.|..+..++.|+...+.||+ .||++++..+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l 85 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL 85 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence 34567788888888888888877666666654 578999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
.+++++.+++++++ ++..++++|++.|+..|.+++...+..+|..|+++ |+++.+
T Consensus 86 ~lFi~~n~l~alAp-------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aia 140 (394)
T COG2814 86 ALFIVSNLLSALAP-------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALA 140 (394)
T ss_pred HHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHH
Confidence 99999999999995 88999999999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccc
Q 044175 170 YFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
....+..++.++|..++.++.+.+|||..|++-+...++.++..+...|
T Consensus 141 iv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 141 LVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999877777766666655544
No 35
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=5.9e-21 Score=196.61 Aligned_cols=157 Identities=11% Similarity=0.110 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 044175 23 LSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQ 102 (537)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~ 102 (537)
+....+-.++...+.++ .+++++|+|.++.+++.+.+.++..++.++.|+++||+ |||+++..+..+++++.++++++
T Consensus 17 ~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 17 IGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY 94 (393)
T ss_pred HHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence 33333334444444444 56689999999999999999999999999999999995 99999999999999999999987
Q ss_pred hhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 044175 103 AYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIG 182 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~ 182 (537)
+ ++..++++|+++|+|.+...+..+..+.|++| ++ |+++++.+..+.++|..++
T Consensus 95 ~-------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 P-------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred c-------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHH
Confidence 4 67788999999999999999999999999887 55 7899999888889999999
Q ss_pred HHHHhhhcccc-cchHHHHHHHHHHH
Q 044175 183 VTAIVYVSTEK-AWWGGFLISSIVTF 207 (537)
Q Consensus 183 ~~~~~~l~~~~-g~~~~f~i~~~~~~ 207 (537)
+.+++++.++. +||..+.+.++..+
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~ 174 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAV 174 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999888775 79988765444433
No 36
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=4.4e-21 Score=193.49 Aligned_cols=346 Identities=18% Similarity=0.160 Sum_probs=249.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~ 97 (537)
+.+....++..++++...+..+.|. +++|.+..+.+++.+...+...++.++.|+++||+ ||||.+..+.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 3456667788888887778888776 46799999999999999999999999999999995 999999999999999998
Q ss_pred HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH
Q 044175 98 MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL 177 (537)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (537)
++.... +...++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++
T Consensus 80 ~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 80 LLAFAS-------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred HHHHhc-------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 888763 67889999999999999999999999999999877 89999999999999
Q ss_pred HHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhh
Q 044175 178 AAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYE 257 (537)
Q Consensus 178 g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 257 (537)
|..++|.+++.+.+..+|+..|.+..+..++..+...+.+ +
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-------------------------- 175 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------R-------------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------H--------------------------
Confidence 9999999999998888899999887776555544433221 0
Q ss_pred hhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHH-HHHHHHHHHhhhhcchhhhee
Q 044175 258 INEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPI-LASTILMNTCLAQLQTFSVTQ 336 (537)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 336 (537)
........ ......... .....+.+..+
T Consensus 176 --------------------------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 204 (352)
T cd06174 176 --------------------------------------------------LLLLLALAFFLLSFGYYG-LLTYLPLYLQE 204 (352)
T ss_pred --------------------------------------------------HHHHHHHHHHHHHhHHHH-HHHHHHHHHHH
Confidence 00000000 001111111 11111111111
Q ss_pred ccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 337 GAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQ-RVGVGLVLSAVSMTIAGFVEVQRR 415 (537)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~-~i~~g~~l~~~~~~~~~~~~~~~~ 415 (537)
..+.+ ....+.......+..++..++..++.++..+ .+ .+..+..+..++.......
T Consensus 205 ~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~----- 262 (352)
T cd06174 205 VLGLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGR-----------RRLLLLIGLLLAALGLLLLALA----- 262 (352)
T ss_pred hcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHHHHHh-----
Confidence 10111 1112233344455555565665554433222 22 5666777777776666553
Q ss_pred hhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Q 044175 416 NAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRIT 495 (537)
Q Consensus 416 ~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~ 495 (537)
.+.+......++.+++.+...+...++..|..|++.|++.+|+.+...+++..+++.+.+.+.+.
T Consensus 263 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~----- 327 (352)
T cd06174 263 ----------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT----- 327 (352)
T ss_pred ----------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 23556677788999999999999999999999999999999999999999999999998876521
Q ss_pred CCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 044175 496 PSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYL 531 (537)
Q Consensus 496 ~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~ 531 (537)
.++...|++.+++.+++.+.++
T Consensus 328 --------------~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 328 --------------GGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred --------------cCcchHHHHHHHHHHHHHHHhe
Confidence 2334557777777777766544
No 37
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=9.2e-21 Score=193.71 Aligned_cols=168 Identities=13% Similarity=0.044 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHH-HHHHHHHHHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLI-FGTLEVLALVMI 99 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~-~~~~~~i~~~l~ 99 (537)
.+..++..++.....+.++.|+++++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.++. +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4557777888888889999999999999999999999999999999999999999995 99987665 445555666666
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh--HHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS--YFNYFLLTTTL 177 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~ 177 (537)
..+. +...+++.|++++.+.+...|...++..|..++++ |.+ ..+......++
T Consensus 82 ~~~~-------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 136 (375)
T TIGR00899 82 AWNR-------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQISL 136 (375)
T ss_pred Hhcc-------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHhH
Confidence 6553 56777888988888877778888888888776544 333 35666677889
Q ss_pred HHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 178 AAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 178 g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
|..++|.+++++.+..+||+.|++.++..++..+..+
T Consensus 137 g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 137 AWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred HHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998889999999988776555544433
No 38
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.89 E-value=2.1e-20 Score=198.05 Aligned_cols=175 Identities=12% Similarity=0.035 Sum_probs=129.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh-HHH-----HHHHHHHHHHHHhhHhHHHhhhccchhHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAG-ASN-----TLTNLMGSTFLLCLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~-~~~-----~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 87 (537)
++.+....+..++|.+.+. +..+..+++.++++.+.++ .++ +.++..++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4555566677777777654 4556667888887644322 122 24666788999999999999995 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhH
Q 044175 88 FGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASY 167 (537)
Q Consensus 88 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 167 (537)
+.++++++++++++++++..+. ...+.++++.|+++|+|.|+..+...++++|++|+++ |++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g-----------~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~ 155 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIG-----------IWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFM 155 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHH-----------HHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHH
Confidence 9999999999999875211000 0001248899999999999999999999999999888 8888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc--------ccccchHHHHHHHHHHH
Q 044175 168 FNYFLLTTTLAAVIGVTAIVYVS--------TEKAWWGGFLISSIVTF 207 (537)
Q Consensus 168 ~~~~~~~~~~g~~i~~~~~~~l~--------~~~g~~~~f~i~~~~~~ 207 (537)
.++...+..+|..+++.+...+. ..+|||+.|++.++..+
T Consensus 156 ~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 156 GSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 88887777777777775554332 25799999998765444
No 39
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=5.3e-21 Score=199.23 Aligned_cols=166 Identities=8% Similarity=0.074 Sum_probs=143.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
.+++.+....+..+.+.+.++.. .+...++++++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence 34555666666666666666544 4444567789999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++.++. +...++++|+++|++.|...+....++.|.+|+++ |+++.++.
T Consensus 93 ~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~ 147 (426)
T PRK12307 93 YSVGTGLSGLAS-------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFL 147 (426)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHH
Confidence 999998888774 67889999999999999999999999999999877 88999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHH
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSI 204 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~ 204 (537)
..+..+|..+++.+.+.+.+..+||+.|++...
T Consensus 148 ~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 148 VSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred HHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 889999999999999998888999999987554
No 40
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=7.5e-21 Score=195.55 Aligned_cols=171 Identities=13% Similarity=0.095 Sum_probs=140.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+|+.+...++..+.....++ ......+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 34444444444555544444 344455566778999999999999999999999999999999995 9999999999988
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+++.... +...+++.|++.|++.+...+...++++|.+|+++ |++.+++..
T Consensus 93 ~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 147 (398)
T TIGR00895 93 SVFTLLCALAT-------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMF 147 (398)
T ss_pred HHHHHHHHHcc-------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHh
Confidence 88888777653 66788899999999999999999999999998776 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~ 210 (537)
...++|..+++.+++++.+..+|+..|++.++...+..
T Consensus 148 ~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 185 (398)
T TIGR00895 148 CGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLL 185 (398)
T ss_pred hHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHH
Confidence 99999999999999999988999999988754443333
No 41
>PRK09952 shikimate transporter; Provisional
Probab=99.89 E-value=2e-20 Score=195.45 Aligned_cols=175 Identities=15% Similarity=0.116 Sum_probs=126.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--CCchhhHHHHHH-----HHHHHHHHHhhHhHHHhhhccchhHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEM--HFNLAGASNTLT-----NLMGSTFLLCLVGGFISDTFLSRFATC 85 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--~~~~~~~~~~~~-----~~~~~~~~~~~~~G~laD~~~Gr~~~~ 85 (537)
++|.+....+..++|...........+.+..+++ +.++. .+++.+ +..++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 4555666666667766665544444455565555 56665 344432 33455667888889999995 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhh
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
.++.+++.+++++++++++.+.+. ......+++.|+++|++.|...+....++.|.+|+++ |+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg 160 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIG-----------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KA 160 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHH-----------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------Cc
Confidence 999999999999999875211000 0012258889999999999999999999999999887 88
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhc--------ccccchHHHHHHHHHH
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIVYVS--------TEKAWWGGFLISSIVT 206 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~~l~--------~~~g~~~~f~i~~~~~ 206 (537)
+..+....+..+|..++..+..++. ..+|||..|++.++..
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 8888887788888888876665553 2579999998876654
No 42
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.89 E-value=1.8e-20 Score=192.25 Aligned_cols=172 Identities=12% Similarity=0.094 Sum_probs=148.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
++.++.+....+......+...+.++. +++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 79 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV 79 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence 356777778888888877777776665 5678999999999999999999999999999999995 99999999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++.+++..+. +.+.+++.|+++|++.|...+...+++.|.+++++ |++.++....
T Consensus 80 ~~~~l~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 134 (382)
T PRK10091 80 IGNAMFTLSS-------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVS 134 (382)
T ss_pred HHHHHHHHhC-------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHH
Confidence 9999888774 67889999999999999988888888999988766 7888888888
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
...+|..++|.+++++.+..+||+.|.+.++...+..+.
T Consensus 135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 889999999999999988889999999877765544443
No 43
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=2.1e-20 Score=191.76 Aligned_cols=160 Identities=9% Similarity=0.039 Sum_probs=139.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
..|.++.+++..++..++...+.+.++.|++ ++|.|..+.+++.+.+.++..++.++.|+++||+ ||||++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~ 81 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIF 81 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHH
Confidence 4567889999999999998888888888876 6899999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++...+..+. +...++++|+++|++.+...+...+.+.|..++++ |++.++.+.
T Consensus 82 ~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (381)
T PRK03633 82 AAGCAGLGLMV-------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYM 136 (381)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 99988887763 67888999999999999988888777888877665 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGF 199 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f 199 (537)
...++|..++|.+++.+.+...+...+
T Consensus 137 ~~~~~g~~~g~~~~~~l~~~~~~~~~~ 163 (381)
T PRK03633 137 MVYYLGTVLGQLLVSKVSTELMSVLPW 163 (381)
T ss_pred HHHHHHHHHHHHHHhcccccccchHHH
Confidence 999999999999999887654344333
No 44
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=3.2e-20 Score=191.19 Aligned_cols=190 Identities=13% Similarity=0.080 Sum_probs=135.8
Q ss_pred CcccccchhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHH-HHHHHhhHhHHHhhhcc
Q 044175 1 MEDKVATIKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMG-STFLLCLVGGFISDTFL 79 (537)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~ 79 (537)
|.+.|..+..+....+.+..++..++.+++.....+.++.|+++++|.+.++.|.+.+...+ ...++++++|+ +||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~- 78 (393)
T PRK15011 1 MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR- 78 (393)
T ss_pred CCCCcccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-
Confidence 44556655555566678888888999999999999999999999999999999999877655 55555555666 9995
Q ss_pred chhHHHH-HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCCh
Q 044175 80 SRFATCL-IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDP 158 (537)
Q Consensus 80 Gr~~~~~-~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 158 (537)
||||.++ .+.++..++..+..++. +...+++.+.+.+...+...|...++..|..++++
T Consensus 79 g~r~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (393)
T PRK15011 79 GDRKSLIVFCCLLGVLACTLFAWNR-------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG- 138 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc-
Confidence 9998755 55555556666666553 45555544444443344667777777777655433
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 159 KGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 159 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
| ..+...+....+.++|.+++|.+++++.++.|||..|++.++..++..+..+.
T Consensus 139 --~-~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 139 --R-EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred --c-hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 0 02334467777889999999999999998899999998877665555444333
No 45
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=1.9e-20 Score=196.42 Aligned_cols=171 Identities=9% Similarity=0.036 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 19 FIFVLSSLENMGFIAN---AISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 19 ~~~~~~~~~~~~~~~~---~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...++....+|.. .....+++.++ |++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 29 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHH
Confidence 3334444444444433 23445677777 99999999999999999999999999999995 9999999999999998
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+.+.+.... ..+...+++.|++.|++.|...+.....+.|++|+++ |++++++++.+.
T Consensus 107 ~~~~~~~~~~---------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 165 (452)
T PRK11273 107 MLFMGFVPWA---------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAH 165 (452)
T ss_pred HHHHHhhhcc---------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHH
Confidence 8887765310 1256678888999999999998888888999998777 899999988888
Q ss_pred HHHHH-HHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 176 TLAAV-IGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 176 ~~g~~-i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
++|+. .+|+.+..+....+||+.|++.++..++..++
T Consensus 166 ~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 166 NVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 88864 45554433333458999998877655544333
No 46
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.89 E-value=3.4e-20 Score=190.86 Aligned_cols=164 Identities=10% Similarity=0.090 Sum_probs=134.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.++.+....++..++........+.. .+++|.++.+.+++.+.+.+...++.+++|+++||+ ||||+++++.+++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 345667777777777655554444444 578999999999999999999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+.+.+.... +. ++.|+++|++.+...|...+++.|.+|+++ |+++.++....
T Consensus 81 ~~~~~~~~~-------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~ 132 (393)
T PRK11195 81 GCLLMLFGI-------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS 132 (393)
T ss_pred HHHHHHHHH-------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 888776653 22 678999999999999999999999999777 99999999989
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
.++|.++||.++|++.+. .|+..+.+.+...+++
T Consensus 133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999998774 4776666555443333
No 47
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=1.4e-21 Score=191.26 Aligned_cols=178 Identities=11% Similarity=0.035 Sum_probs=158.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHH---HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAI---SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
+.|--+.+++..++...+||-+.- ...+++.++.++|.+|.|.+.+.+.+.+.++-.+.|.++||. +.|+.+..++
T Consensus 23 y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gL 101 (448)
T COG2271 23 YKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHH
Confidence 334447788888999999998764 455788999999999999999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
++.++..+++++++ +...+.+..++.|..+|.-.|.....++.++++++ |++..+
T Consensus 102 ilsai~nil~Gfs~-------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~s 156 (448)
T COG2271 102 ILSAIVNILFGFSP-------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWS 156 (448)
T ss_pred HHHHHHHHHHhhhh-------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEE
Confidence 99999999999985 67888888999999999999999999999999988 999999
Q ss_pred HHHHHHHHHHHHHHHHH--hhhcccccchHHHHHHHHHHHHHHHHHHhc
Q 044175 170 YFLLTTTLAAVIGVTAI--VYVSTEKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~--~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
+++.+-|+|+++.|.+. +++..+.+||..|++++++.++..+..++.
T Consensus 157 iWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 157 IWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred EehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 889888899999999998766555444443
No 48
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.89 E-value=1.2e-20 Score=199.50 Aligned_cols=154 Identities=12% Similarity=0.118 Sum_probs=122.4
Q ss_pred cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc-cccCCCCCCCCCccCCchh
Q 044175 46 MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYS-EKLHPPDCGKSSCVKGGIA 124 (537)
Q Consensus 46 l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 124 (537)
+|.+..+.+++.+.+.++..+++++.|+++||+ ||||+++++.++..++.+.++..... .....+ +....
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~--------~~~~~ 120 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGPD--------NTGYV 120 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcccccccccc--------chhHH
Confidence 488999999999999999999999999999995 99999999999998888777653100 000000 01235
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc--------ccccch
Q 044175 125 AYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVS--------TEKAWW 196 (537)
Q Consensus 125 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~--------~~~g~~ 196 (537)
..++++|+++|++.|...+...++++|++|+++ |+++++....+..+|..+++.+++.+. +.+|||
T Consensus 121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr 194 (479)
T PRK10077 121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR 194 (479)
T ss_pred HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence 678899999999999999999999999999887 899999988888999998887765442 356999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 044175 197 GGFLISSIVTFIGFIALV 214 (537)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~ 214 (537)
+.|++.++..++..+..+
T Consensus 195 ~~f~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 195 YMFASEAIPALLFLMLLY 212 (479)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999987766555444333
No 49
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=5.4e-20 Score=189.59 Aligned_cols=174 Identities=15% Similarity=0.135 Sum_probs=143.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
+++|..+...+..++.....+.....++. +.+++|++..+.+++.+.+.++..++.+++|+++||+ ||||++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 46677777777767666665545455554 5678999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++.++. +...+++.|+++|++.|...+...+.+.|.+|+++ |++..+..
T Consensus 82 ~~i~~~l~~~~~-------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~ 136 (394)
T PRK03699 82 MILAVAGLMFSH-------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFT 136 (394)
T ss_pred HHHHHHHHHHcc-------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHH
Confidence 999988888763 67788999999999999999999999999998766 88888887
Q ss_pred HHHHHHHHHHHHHHHhhhc-ccccchHHHHHHHHHHHHHHHH
Q 044175 172 LLTTTLAAVIGVTAIVYVS-TEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~-~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
+....+|+.++|.+.+++. +..+||+.|.+.++..++..+.
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 137 DSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 7788889999998888765 4579999998766655444433
No 50
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.89 E-value=4.4e-20 Score=196.26 Aligned_cols=178 Identities=11% Similarity=0.020 Sum_probs=132.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNE-----MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
+.+.+..+..+.+.+....+....+. +..+ .+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~ 93 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHH
Confidence 34444444455554444333333333 3322 245566778999999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
++..++.++++.+..... ..+...++++|+++|++.|...+..+.+++|.+|+++ |+++.+
T Consensus 94 ~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~ 154 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSP-------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMA 154 (502)
T ss_pred HHHHHHHHHHHHccCccc-------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHH
Confidence 999999988877631000 0125789999999999999999999999999999888 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc-----------------------cccchHHHHHHHHHHHHHHHHH
Q 044175 170 YFLLTTTLAAVIGVTAIVYVST-----------------------EKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l~~-----------------------~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
+.+....+|..+++.++.++.. .++||+.|.+.++..++..+..
T Consensus 155 ~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~ 221 (502)
T TIGR00887 155 AVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFR 221 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHH
Confidence 9998889999888887764421 2479999987776555444443
No 51
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=7.5e-21 Score=200.39 Aligned_cols=155 Identities=8% Similarity=-0.057 Sum_probs=127.2
Q ss_pred HHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCc
Q 044175 39 VLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSC 118 (537)
Q Consensus 39 ~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~ 118 (537)
.+.+.+++|++..+.+++.+.+.+++.++.+++|+++||+ ||||++.++.++..++.+..+.....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 4567789999999999999999999999999999999995 99999999988888877766653100
Q ss_pred cCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc---cc
Q 044175 119 VKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK---AW 195 (537)
Q Consensus 119 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~---g~ 195 (537)
...+...+++.|+++|++.|...|...++++|++|+++ |+++++++..+.++|.++++.+..++.... +|
T Consensus 118 -~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~ 190 (467)
T PRK09556 118 -GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV 190 (467)
T ss_pred -ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence 01367889999999999999999999999999999888 899999988888999999988887665542 58
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 044175 196 WGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~ 214 (537)
+..|.+.++..++..+..+
T Consensus 191 ~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 191 IGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred hhHHHHHHHHHHHHHHHHH
Confidence 8888776665544433333
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.88 E-value=1.7e-19 Score=186.46 Aligned_cols=170 Identities=9% Similarity=0.000 Sum_probs=140.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
+.||.+....+.+++...+.+...++++.++ +++|.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+..+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 5677888888888888888888888888888 56899999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++...... ..+...+++.|+++|+|.+...+...+.+.|.+|+++ |+++.+..
T Consensus 88 ~~~~~~~~~~~~~~---------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 146 (402)
T TIGR00897 88 WCVGHAAFIVFGLG---------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSAVGWF 146 (402)
T ss_pred HHHHHHHHHHHhcc---------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHHHHHH
Confidence 88887655321100 1256677889999999988887777888888888776 89999999
Q ss_pred HHHHHHHH-HHHHHHHhhhcccccchHHHHHHHH
Q 044175 172 LLTTTLAA-VIGVTAIVYVSTEKAWWGGFLISSI 204 (537)
Q Consensus 172 ~~~~~~g~-~i~~~~~~~l~~~~g~~~~f~i~~~ 204 (537)
..+.++|. .++|.+++++.+..||+..++....
T Consensus 147 ~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 147 WAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 98889996 5899999998888887655554433
No 53
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=1.8e-19 Score=186.71 Aligned_cols=146 Identities=13% Similarity=0.098 Sum_probs=128.5
Q ss_pred hhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCC
Q 044175 42 FKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKG 121 (537)
Q Consensus 42 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 121 (537)
+.+++|.+.++.++..+.+.++..++.++.|+++||+ |||+++..+..++.++.+++..+.
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------ 102 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------ 102 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence 5678999999999999999999999999999999995 999999999999999998888763
Q ss_pred chhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHH
Q 044175 122 GIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLI 201 (537)
Q Consensus 122 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i 201 (537)
+...++++|+++|++.+...+...+++.|.+++++ +++.+++.....++|..++|.+++++.+..|||+.|++
T Consensus 103 -~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~ 175 (413)
T PRK15403 103 -SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI 175 (413)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 67889999999999998777777788899998777 78889998889999999999999999888899999998
Q ss_pred HHHHHHHHHHHH
Q 044175 202 SSIVTFIGFIAL 213 (537)
Q Consensus 202 ~~~~~~~~~~~~ 213 (537)
.++..++..+..
T Consensus 176 ~~~~~~i~~~~~ 187 (413)
T PRK15403 176 IAVMGLIAFVGL 187 (413)
T ss_pred HHHHHHHHHHHH
Confidence 777665555443
No 54
>TIGR00898 2A0119 cation transport protein.
Probab=99.88 E-value=3.2e-20 Score=197.77 Aligned_cols=147 Identities=18% Similarity=0.164 Sum_probs=126.7
Q ss_pred HHhhhhcCCc---hhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 40 LYFKNEMHFN---LAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 40 ~yl~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
.-+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||+++.++.++..++.++.+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~------------- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP------------- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 3456789998 89999999999999999999999999995 999999999999999988888763
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccch
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWW 196 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~ 196 (537)
++..+++.|++.|++.+...+...+++.|.+|+++ |++..++...+..+|.+++|.++..+.+ ||
T Consensus 179 ------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr 243 (505)
T TIGR00898 179 ------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WR 243 (505)
T ss_pred ------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HH
Confidence 67889999999999999999999999999999877 8888888888888999999988776543 99
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 044175 197 GGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~ 215 (537)
+.|++.++..++..+..++
T Consensus 244 ~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 244 WLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9998877665555544443
No 55
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.88 E-value=3.2e-20 Score=195.46 Aligned_cols=145 Identities=16% Similarity=0.219 Sum_probs=123.5
Q ss_pred CchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHH
Q 044175 48 FNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYF 127 (537)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (537)
.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++..... ..+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 130 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF----------------ALSVEML 130 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHH
Confidence 3389999999999999999999999999995 9999999999999999988866531 1244588
Q ss_pred HHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH---hhhcccccchHHHHHHHH
Q 044175 128 YASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAI---VYVSTEKAWWGGFLISSI 204 (537)
Q Consensus 128 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~---~~l~~~~g~~~~f~i~~~ 204 (537)
+++|+++|+|.|...+...++++|.+|+++ |++++++.+.+.++|..+++.++ +...+..+||+.|++.++
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~ 204 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI 204 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999887 89999999999999999999998 766677899999998665
Q ss_pred HHHHHHHHHHh
Q 044175 205 VTFIGFIALVI 215 (537)
Q Consensus 205 ~~~~~~~~~~~ 215 (537)
..++.++..++
T Consensus 205 ~~~~~~~~~~~ 215 (481)
T TIGR00879 205 PAGLLFLGLFF 215 (481)
T ss_pred HHHHHHHHHhc
Confidence 55444444333
No 56
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.87 E-value=3.9e-20 Score=194.01 Aligned_cols=150 Identities=9% Similarity=0.059 Sum_probs=124.8
Q ss_pred HHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCcc
Q 044175 40 LYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCV 119 (537)
Q Consensus 40 ~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~ 119 (537)
..+.+++|++.++.+++.+.+.+...++.++.|+++||+ |||++++.+.++..++.++++++.
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 105 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS---------------- 105 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence 445678999999999999999999999999999999995 999999999999999888887764
Q ss_pred CCchhHHHHH-HHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHH
Q 044175 120 KGGIAAYFYA-SLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGG 198 (537)
Q Consensus 120 ~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~ 198 (537)
+...+++ .|++.|++.|...+...+++.|.++ ++ |+++.++.+.+.++|..++|.+++++.+.+|||+.
T Consensus 106 ---~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~ 175 (455)
T TIGR00892 106 ---NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS 175 (455)
T ss_pred ---hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence 4455544 5688999999876666778888885 44 89999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 044175 199 FLISSIVTFIGFIALVIG 216 (537)
Q Consensus 199 f~i~~~~~~~~~~~~~~~ 216 (537)
|++.+++.++..+..++.
T Consensus 176 f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 176 FLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 998877665554444333
No 57
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.87 E-value=8.2e-20 Score=192.61 Aligned_cols=175 Identities=13% Similarity=0.075 Sum_probs=131.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+++.+.......++.....+.+.+. .+++.+++|++..+.+++.+.+.+++.++.+++|+++||+ |||+++..+.+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3344444444455555555544433 3466789999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.++++++. +...+++.|+++|++.+... ....+++|++|+++ |+++++..+
T Consensus 112 ~~~~~~~~~~~-------------------s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~g~~~ 165 (476)
T PLN00028 112 APAVFCMSLVS-------------------SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTANGIAA 165 (476)
T ss_pred HHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHHHHHH
Confidence 99888877763 56778889999999988654 34567899999877 899999887
Q ss_pred HHHHHHHHHHHHHHhhhc----c-----cccchHHHHHHHHHHHHHHHHHHh
Q 044175 173 LTTTLAAVIGVTAIVYVS----T-----EKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~----~-----~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
...++|+.+++.+.+.+. + ..|||+.|++.+++.++..+..++
T Consensus 166 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 166 GWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 777777777766554432 1 258999999877766555444443
No 58
>PRK15075 citrate-proton symporter; Provisional
Probab=99.87 E-value=2.2e-19 Score=187.45 Aligned_cols=173 Identities=14% Similarity=0.026 Sum_probs=125.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHH-HHHHH-----HHHHHhhHhHHHhhhccchhHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTL-TNLMG-----STFLLCLVGGFISDTFLSRFATCL 86 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~-~~~~~-----~~~~~~~~~G~laD~~~Gr~~~~~ 86 (537)
+++.....++..+++.+....+. ...+.+.++++.++.+.+.+. +.... ...+++++.|+++||+ ||||++.
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHH
Confidence 44555666666677766665444 444577788998887765443 22222 2236788999999995 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 87 IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 87 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
.+.++..++.++++++++...+. ......++++|+++|++.|...+....+++|++|+++ |++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~-----------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~ 153 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIG-----------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGF 153 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHH-----------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chH
Confidence 99999999999998874110000 0001257889999999999999999999999999888 899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--------cccccchHHHHHHHH
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYV--------STEKAWWGGFLISSI 204 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l--------~~~~g~~~~f~i~~~ 204 (537)
..++.....++|..+++.+++.+ .+.+|||++|++..+
T Consensus 154 ~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 154 YTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 99988777777777777766654 246799999987543
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.87 E-value=3.1e-19 Score=183.12 Aligned_cols=368 Identities=12% Similarity=0.017 Sum_probs=222.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH-HH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE-VL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~-~i 94 (537)
..+.+.+..++...++....++++.|++ ++|++..+.+++.+.+.+...++.++.|.++||+ ||++......... .+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l 82 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAI 82 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 3344555566666666666788888884 6899999999999999999999999999999995 9854432222111 11
Q ss_pred HHH-HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 95 ALV-MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
..+ +...+ ++.+.+++.|++++.+.+...|...++..|. +++ |++.++....
T Consensus 83 ~~~~~~~~~-------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~~ 135 (382)
T TIGR00902 83 FAAAFSAGA-------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVRL 135 (382)
T ss_pred HHHHHHHhh-------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHHH
Confidence 111 12222 3678888999999999888888888876543 222 6788888888
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChh
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPE 253 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (537)
..++|.+++|.+++++.+.+||+..|.+......+..+ .+..+++. +|++++.+ .
T Consensus 136 ~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~-------------------~-- 190 (382)
T TIGR00902 136 IGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTI---PPKDAIPE-------------------D-- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCC---CCCccccc-------------------c--
Confidence 99999999999999999999999998876544322222 22222210 11000000 0
Q ss_pred hhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhh
Q 044175 254 ELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFS 333 (537)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 333 (537)
+. . +..++. ++-..|++.... ....+.+.......+..
T Consensus 191 --------------~~-~--~~~~~~----------------------~~l~~~~~~~~l---~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 191 --------------ES-Q--GDSAFI----------------------ALLKNPMNLRFL---AAVCLIQGAHAAYYGFS 228 (382)
T ss_pred --------------cc-c--cchhHH----------------------HHHcChHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 00 0 000000 000011121111 11122222222222211
Q ss_pred heeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 334 VTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQ 413 (537)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~ 413 (537)
..+....+.+ ....+....+..+..++..++.++ +.+|+ +..+.+.++.++.++.....++.
T Consensus 229 ~~~l~~~g~s----~~~~g~l~~~~~~~~i~~~~~~~~----l~~r~-------g~~~~l~~~~~~~~~~~~~~~~~--- 290 (382)
T TIGR00902 229 AIYWQAAGIS----ASATGLLWGIGVLAEIIIFAFSNK----LFQNC-------SARDLLLISAIACVGRWAIIGAI--- 290 (382)
T ss_pred HHHHHHCCCC----HhHHHHHHHHHHHHHHHHHHHhHH----HHhhC-------CHHHHHHHHHHHHHHHHHHHHhH---
Confidence 1111111111 111112222233333333333333 33332 55666778888888887766653
Q ss_pred HhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhc
Q 044175 414 RRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTF-LSLSFGNFLSSVFVDIINAVTK 492 (537)
Q Consensus 414 ~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~~g~~~~~~l~~~i~~~~~ 492 (537)
.+.+.++...++.++..+...+....++.+. |++.|++++++++ ...++|..+++.+.+.+.+..
T Consensus 291 ------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~- 356 (382)
T TIGR00902 291 ------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL- 356 (382)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 2445566678999999999999999999988 9999999999987 467799999999998776322
Q ss_pred cCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 044175 493 RITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLY 530 (537)
Q Consensus 493 ~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~ 530 (537)
+. ..|+..+++++++.++.
T Consensus 357 ------------------g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 357 ------------------GA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred ------------------cH-HHHHHHHHHHHHHHHHH
Confidence 11 34677777777765543
No 60
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=194.99 Aligned_cols=369 Identities=15% Similarity=0.178 Sum_probs=241.1
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchh
Q 044175 45 EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIA 124 (537)
Q Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (537)
+++++..+.+++.+.+..++.++++++|+++||+ |-|+++.++.++.++++++...+.. .+.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-----------------~~~ 128 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-----------------IGF 128 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-----------------hcc
Confidence 6889999999999999999999999999999995 9999999999999999999998863 244
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc-ccchHHHHHHH
Q 044175 125 AYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE-KAWWGGFLISS 203 (537)
Q Consensus 125 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~-~g~~~~f~i~~ 203 (537)
..+++.|++||++.|...|+...+.+.+.|++| |++..+..+....+|.+++-.++|++.+. .||+.+|++.+
T Consensus 129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g 202 (466)
T KOG2532|consen 129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG 202 (466)
T ss_pred hhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence 578999999999999999999999999999888 99999999988899999999999999888 99999999999
Q ss_pred HHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhc
Q 044175 204 IVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAA 283 (537)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (537)
++.++..++++....+ +|++++.. +.+|+..+ ++.+
T Consensus 203 ~~g~i~~~~w~~~~~d----~P~~h~~i-------------------s~~El~~I---------------------~~~k 238 (466)
T KOG2532|consen 203 IVGLIWFILWFLFYSD----SPSKHPNI-------------------SEKELKYI---------------------EKGK 238 (466)
T ss_pred HHHHHHHHHHHHHhcC----CcccCCCC-------------------CHHHHHHH---------------------Hhcc
Confidence 9888888877765443 23222211 11111111 0000
Q ss_pred cCCCCC-CCCCCcccccchhHHHHHHHHhHHHHHH-------HHHHHHHhhhhcchhhheeccccCCCCCccccCCCccc
Q 044175 284 IVPKDS-TEAAPWRVCTLTQVEEVKILTRMMPILA-------STILMNTCLAQLQTFSVTQGAYMDPQLGSIKVPTPSIP 355 (537)
Q Consensus 284 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (537)
.....+ ..+-+|+ .+++-.+++. ....+++..++. +.|..+..+.+. ..++.+.
T Consensus 239 ~~~~~~~~~~vP~~-----------~i~ts~~vwai~~~~f~~~~~~~~l~~y~-PtY~~~VL~f~v------~~~G~~s 300 (466)
T KOG2532|consen 239 SEAHVKKKPPVPYK-----------AILTSPPVWAIWISAFGGNWGFYLLLTYL-PTYLKEVLGFDV------RETGFLS 300 (466)
T ss_pred cccccCCCCCCCHH-----------HHHcCHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHhCCCh------hhhhHHH
Confidence 000000 0113342 2222222221 122222222222 333333333442 2445666
Q ss_pred ccchHhHHHHhhhhcchhccccccccCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHH
Q 044175 356 VIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRV--GVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSF 433 (537)
Q Consensus 356 ~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i--~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~ 433 (537)
+++.+...+...+...+.|++.+| . .. ....+++ .++....++.++..++... .+. ++.+
T Consensus 301 alP~l~~~~~k~~~g~lsD~l~~~-~-ls--~t~~rkifn~i~~~~~ai~l~~l~~~~~-------------~~~-~~a~ 362 (466)
T KOG2532|consen 301 ALPFLAMAIVKFVAGQLSDRLTFR-I-LS--ETTVRKIFNTIAFGGPAVFLLVLAFTSD-------------EHR-LLAV 362 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-c-Cc--hHhHHHHHHhHHHHHHHHHHHeeeecCC-------------Ccc-hHHH
Confidence 666666666666666666655444 1 11 1233333 4455555555555555311 111 1222
Q ss_pred HHHHHHHHHHHHhhhhHHHhhhc-cCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchh
Q 044175 434 QYCIFGIADMFTLVGLLEFFYKE-APAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNA 512 (537)
Q Consensus 434 ~~~l~g~g~~~~~~~~~~~~~~~-~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~ 512 (537)
....++.+.......+..-.... + +++-+..+|+.+....+..+++|.+++.+.. . + +...+
T Consensus 363 ~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~--------------~-t~~eW 425 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT-D--------------N-TREEW 425 (466)
T ss_pred HHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC-C--------------C-CHHHH
Confidence 22222233333333333333333 4 4558899999999999999999999886552 1 1 23567
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc
Q 044175 513 NLFYWFLAILSVLNFVLYLYAA 534 (537)
Q Consensus 513 ~~~f~~~~~l~~~~~v~~~~~~ 534 (537)
...|++.+++.++..++|.++.
T Consensus 426 ~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 426 RIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHHhchheeEee
Confidence 7889999999999988887764
No 61
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.87 E-value=3.9e-19 Score=183.22 Aligned_cols=170 Identities=11% Similarity=0.089 Sum_probs=140.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
.+|..+.......+..+......+.++ ++.+++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 455666666666666666654444444 45678999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+++.... +...+++.|++.|++.+...+....+..|.+++++ ++++.+...
T Consensus 84 ~~~~~~~~~~~-------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 138 (394)
T PRK11652 84 ILGTLVALFAH-------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANSLLN 138 (394)
T ss_pred HHHHHHHHHHc-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHHHHH
Confidence 99888877653 67888999999999998887877788888887655 778888888
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
.+..++..++|.+++++.+..||+..|++.++..++.
T Consensus 139 ~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 139 MGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Confidence 8889999999999999988889999998876654433
No 62
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.87 E-value=1.3e-19 Score=188.53 Aligned_cols=392 Identities=9% Similarity=0.017 Sum_probs=219.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
.+.+|.+.+..++..++++...++++.|+++++|+++.+.+.+.+.+.+...+++++.|+++||+ ||||++.++.....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 46778888888888898888999999999999999999999999999999999999999999995 99999988776665
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++..........+. -......+..+.++..|...+...+.+.++.++.. ++++..++....
T Consensus 88 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~ 148 (420)
T PRK09528 88 VLFGPFFIYVFAPL---------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYGRARM 148 (420)
T ss_pred HHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccchhhHH
Confidence 55432221100000 00011122222333333333333333333322111 125566777777
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChh
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPE 253 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (537)
..++|..++|.+++++.+ .+|+..|++.++..++..+..+..+++.++++. .++ .++.
T Consensus 149 ~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~-- 206 (420)
T PRK09528 149 WGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAK-VAN------------------ALGA-- 206 (420)
T ss_pred hhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhh-hcc------------------chhc--
Confidence 789999999999998876 489999988776665555554443322111000 000 0000
Q ss_pred hhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHh-HHHHHHHHHHHHHhhhhcchh
Q 044175 254 ELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTR-MMPILASTILMNTCLAQLQTF 332 (537)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~ 332 (537)
++ .... ..+..... . .+.+.. .+........+.....+.+..
T Consensus 207 --------------~~--~~~~--~~~~~~~l------------------~-~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 249 (420)
T PRK09528 207 --------------NA--SAVS--LKDALALL------------------K-LPKFWFLVLYVIGVACFYDVFDQQFPNF 249 (420)
T ss_pred --------------cc--cccc--HHHHHHHc------------------c-CCCeEeehHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000 00000000 0 001100 111111111111211222222
Q ss_pred hheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044175 333 SVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEV 412 (537)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~ 412 (537)
...... +...+ ....+....+..+...+..++..++.+++.+ .+.+..+.++.+++....++.
T Consensus 250 ~~~~~~--~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-----------~~~~~~~~~l~~~~~~l~~~~-- 312 (420)
T PRK09528 250 FASFFA--TPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGA-----------KNALLLAGTIMAVRIIGSGFA-- 312 (420)
T ss_pred HHHHHh--ccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-----------chhhHHHHHHHHHHHHHHHhc--
Confidence 111110 11100 0011222333334444555555554443322 233556666666666655542
Q ss_pred HHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHH-HHHHHHHHHHHHHHHHHHhhhhh
Q 044175 413 QRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSF-TFLSLSFGNFLSSVFVDIINAVT 491 (537)
Q Consensus 413 ~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~~g~~~~~~l~~~i~~~~ 491 (537)
.+.++++...++.+++.....+...+++.+..|++.+++..+. +++...+|.++++.+.+.+.+..
T Consensus 313 -------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~ 379 (420)
T PRK09528 313 -------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI 379 (420)
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2334555567777887777778888999999999999988765 67778899999999888766322
Q ss_pred ccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 044175 492 KRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYA 533 (537)
Q Consensus 492 ~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~ 533 (537)
++...|...+++.++..++.+..
T Consensus 380 -------------------G~~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 380 -------------------GFQGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred -------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 24455777777776666555444
No 63
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.86 E-value=3e-20 Score=189.63 Aligned_cols=152 Identities=11% Similarity=0.056 Sum_probs=131.9
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 37 SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
...+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++..+.
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------- 81 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------- 81 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence 344577889999999999999999999999999999999995 999999999999999998888774
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-HHHhhhcccccc
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGV-TAIVYVSTEKAW 195 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~-~~~~~l~~~~g~ 195 (537)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++...+.++|..++| .+++.+.+..+|
T Consensus 82 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (379)
T TIGR00881 82 ------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW 149 (379)
T ss_pred ------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence 67889999999999999999999999999999877 88999998889999999999 577777777899
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 044175 196 WGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~ 214 (537)
+..|++.+++.++..+..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 150 HWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 9999887765554444333
No 64
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=1.6e-19 Score=191.96 Aligned_cols=167 Identities=13% Similarity=0.166 Sum_probs=143.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
.+|+.+..+.+..++..+.+..... ..+.+.+++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3455666666666776666655544 44566788999999999999999999999999999999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+++.++. +...+++.|++.|++.+...+...+++.|.+|+++ |++.++..
T Consensus 95 ~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 149 (496)
T PRK03893 95 FSVGTLACGFAP-------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFL 149 (496)
T ss_pred HHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 999998888763 67888999999999999999999999999999766 88999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHH
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIV 205 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~ 205 (537)
....++|..++|.+++++.+.++||+.|.+.++.
T Consensus 150 ~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 150 ISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 9899999999999999999989999999875543
No 65
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.86 E-value=9.1e-20 Score=190.56 Aligned_cols=155 Identities=10% Similarity=0.055 Sum_probs=126.3
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 37 SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
...+++++ +|+++++.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+++......
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~----------- 114 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA----------- 114 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc-----------
Confidence 34456665 599999999999999999999999999999995 99999999999988888876654210
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhh-hcccccc
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVY-VSTEKAW 195 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~-l~~~~g~ 195 (537)
..+...+.+.|++.|++.|...+.....+.|.+|+++ |++++++.+...++|+.+++.+.+. +....+|
T Consensus 115 ----~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w 184 (438)
T TIGR00712 115 ----TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDW 184 (438)
T ss_pred ----cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhh
Confidence 1245667788999999999999988999999999888 8999999998999999988877665 4445689
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 044175 196 WGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~ 214 (537)
|..|++.++..++..+..+
T Consensus 185 ~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 185 HAALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999987776655444333
No 66
>PRK11043 putative transporter; Provisional
Probab=99.86 E-value=9.8e-19 Score=180.70 Aligned_cols=168 Identities=16% Similarity=0.186 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--hhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLY--FKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~y--l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l 98 (537)
+.+......++++.....|.+ +++++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~ 87 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLG 87 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHH
Confidence 333333444444444444443 6788999999999999999999999999999999995 9999999999998888888
Q ss_pred HHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 044175 99 ITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLA 178 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (537)
+..+. +...+++.|+++|++.+...+...+++.|.+++++ +.+.++......++|
T Consensus 88 ~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 142 (401)
T PRK11043 88 MLWVE-------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALS 142 (401)
T ss_pred HHHhc-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHH
Confidence 77663 67788899999999988888888888999998766 677788877778899
Q ss_pred HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 179 AVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
..++|.+++++.+..+|+..|++..+..++..+..+
T Consensus 143 ~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 143 PALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999889999999887766555544443
No 67
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=5.4e-19 Score=182.31 Aligned_cols=179 Identities=9% Similarity=-0.043 Sum_probs=133.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.+|.+....++...++....++++.|+++++|+++.+.+++.+.+.+...++.++.|+++||+ ||||.+..+....++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4577888888999999899999999999999999999999999999999999999999999995 999999988776665
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+..........+... ......+.+.+++.|++.+...+....+..|..+ + ++..++.....
T Consensus 81 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~~~~~ 141 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQ-----------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGKARMF 141 (396)
T ss_pred HHHHHHHHHhhhHHH-----------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccchhhhh
Confidence 443322110000000 0022345667888888888888888777666422 1 23455666667
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
.++|.+++|.+++.+.+ .+|+..|++.+++.++..+..+
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 78999999999998765 5999999887766655544443
No 68
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.85 E-value=4.3e-19 Score=181.67 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=133.4
Q ss_pred HHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 044175 34 NAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDC 113 (537)
Q Consensus 34 ~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 113 (537)
..+.++.+. +++|+++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++..++....
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 445666665 57999999999999999999999999999999995 999999999999999998888763
Q ss_pred CCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 044175 114 GKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK 193 (537)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 193 (537)
+...+++.|+++|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+..
T Consensus 78 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 142 (377)
T PRK11102 78 ---------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLVWF 142 (377)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66788899999999999999999999999998777 899999999999999999999999998888
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 044175 194 AWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 194 g~~~~f~i~~~~~~~~~~~~ 213 (537)
+|++.|++.++...+..+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 143 SWHAIFWVLALAAILAAALV 162 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 99999988776655544443
No 69
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=7.4e-21 Score=187.91 Aligned_cols=180 Identities=11% Similarity=0.057 Sum_probs=160.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
..++.+..++++++++++.-|.+-... .=.++.+|.++++.|++.+.+.+...++.|+.|+|+||+ .||+++.+|..+
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i 107 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI 107 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence 345568889999999999999776633 345778999999999999999999999999999999996 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
+.++.+..+++. .++++.+.|.+.|+|.+...|..+++++|.||+.+ |++.++++
T Consensus 108 W~~Av~~~~fs~-------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~if 162 (493)
T KOG1330|consen 108 WTLAVFASGFSN-------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGIF 162 (493)
T ss_pred HHHHHHHHHHHH-------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHHh
Confidence 999999999885 78999999999999999999999999999999888 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHHhccc
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
|+++++|..+|.++++++.+..+ ||++|...+++.++..++.++..+
T Consensus 163 y~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 163 YFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999999999999988776 999999988887766666555433
No 70
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.84 E-value=1.9e-18 Score=202.10 Aligned_cols=156 Identities=15% Similarity=0.081 Sum_probs=126.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh--hHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLA--GASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
.+.+..++...++..++..+....+..++...++.+.. ..+++.+++.++..++++++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 34556666677777776666666666677666666543 468889999999999999999999995 999999999887
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.+++.++..++.. ..+...+++.|+++|++.+...+...++++|.+|+++ |++++++.
T Consensus 87 ~~~~~~~~~~~~~----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 144 (1146)
T PRK08633 87 EVGLTLLIVLAYY----------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLL 144 (1146)
T ss_pred HHHHHHHHHHHHH----------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHH
Confidence 7666655544321 1357889999999999999999999999999999887 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhccc
Q 044175 172 LLTTTLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~ 192 (537)
..+.++|.++++.+++++...
T Consensus 145 ~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 145 EAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988765
No 71
>PRK10133 L-fucose transporter; Provisional
Probab=99.84 E-value=3.4e-18 Score=178.19 Aligned_cols=153 Identities=16% Similarity=0.029 Sum_probs=122.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
....+..+.++-+...+.........|. +++++|.++.+.+++.+.+.++..++.++.|+++||+ ||||++..+..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 4445566666666667776555555554 5899999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
+++.+++..... .++...++++|+++|+|.|...+..++++.|..++++ |...++...
T Consensus 102 ~~~~~l~~~~~~----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~ 159 (438)
T PRK10133 102 ALGAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQ 159 (438)
T ss_pred HHHHHHHHHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHH
Confidence 999987642210 1367889999999999999999999999998755444 444577777
Q ss_pred HHHHHHHHHHHHHHhhh
Q 044175 173 LTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l 189 (537)
....+|..++|.+++.+
T Consensus 160 ~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 160 TFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77788888888877654
No 72
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.84 E-value=2.3e-18 Score=200.94 Aligned_cols=361 Identities=11% Similarity=0.009 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchh-hHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHH--HHHHHHHHHH
Q 044175 24 SSLENMGFIANAISMVLYFKNEMHFNLA-GASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGT--LEVLALVMIT 100 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~--~~~i~~~l~~ 100 (537)
.+.+++....+.......+++..+.+.. ..++..+++.+...++.+++|+++||+ |||+++..... +...+..+..
T Consensus 24 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~ 102 (1140)
T PRK06814 24 AFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYG 102 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333334444444333 467778889999999999999999995 99998644222 2222222222
Q ss_pred HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 044175 101 VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAV 180 (537)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (537)
... .+++.++++|+++|++.+...|...+++.|++++++ |++++++...+.++|.+
T Consensus 103 ~~~------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 103 FHL------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAIL 158 (1140)
T ss_pred HHH------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHH
Confidence 221 267899999999999999999999999999999887 99999999999999999
Q ss_pred HHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhh
Q 044175 181 IGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINE 260 (537)
Q Consensus 181 i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (537)
+||.++|++....+|+..|+..++..+++.++.+..++. +..++..+...... +
T Consensus 159 igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------------------~--- 212 (1140)
T PRK06814 159 LGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKT-GNAAPDLKIDRNII----------------------R--- 212 (1140)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCC-CCCCCCCeeccchH----------------------H---
Confidence 999999999988899988855444444333333322211 11100000000000 0
Q ss_pred hhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhH-HHHHHHHHHHHHhhhhcchhhheeccc
Q 044175 261 KERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRM-MPILASTILMNTCLAQLQTFSVTQGAY 339 (537)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~ 339 (537)
+ ..+. + +.+...+.+... +....+...+.....+.+. +.....+
T Consensus 213 --------------~--~~~~-------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~g 257 (1140)
T PRK06814 213 --------------S--TITL-------------L-----KYAKADKRIWLAILGISWFWLVGAVVLSQLPL-LAKETLG 257 (1140)
T ss_pred --------------H--HHHH-------------H-----HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHcC
Confidence 0 0000 0 000000111111 1111111111122222211 2111111
Q ss_pred cCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 044175 340 MDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFN 419 (537)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~ 419 (537)
.+ ....+.+.....++.++...+..++.++..+ .+.+..+.++.++..+...+.... .....
T Consensus 258 ~~------~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~-----------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 319 (1140)
T PRK06814 258 GD------ENVATLFLAVFSVGVAVGSFLASKLSEGRIT-----------LLYVPIGALLMGLFGLDLAFASSS-VPAEP 319 (1140)
T ss_pred Cc------hHHHHHHHHHHHHHHHHHHHHHHHHhCCcee-----------eeeehHHHHHHHHHHHHHHhcccc-ccccc
Confidence 11 1112334444556666666666654322211 112333333333332222221000 00000
Q ss_pred cC-----C-CccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044175 420 QM-----P-PKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 420 ~~-----g-~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~ 488 (537)
.. . ....+.+.+++..++.|++.++..+...+++.+.+|++.||+++|+.++.+.++..+++.+.+.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 320 AQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred ccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 000234556677888899999999999999999999999999999999999999999998887765
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2e-18 Score=176.59 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHH
Q 044175 54 SNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCL 133 (537)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 133 (537)
+.+++++.++..+++.++|+++||+ |||..++++.++..++.+++..+.. ..+..+++++|++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~----------------~~~~e~li~GR~i 125 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKS----------------APSFEMLILGRLI 125 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHH----------------hhhHHHHHHHHHH
Confidence 6778889999999999999999995 9999999999999999888877643 2477899999999
Q ss_pred HHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH-h-hhcccccchHHHHHHHHHHHHHHH
Q 044175 134 YALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAI-V-YVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 134 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~-~-~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
.|+..|......+.++.|..|++- ||..-....++..+|..++..++ . .+.....|++.+....+..++.++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 88888888888999999886555 2 233455699988888877666665
Q ss_pred HHHhc
Q 044175 212 ALVIG 216 (537)
Q Consensus 212 ~~~~~ 216 (537)
.+.+.
T Consensus 200 ~l~~~ 204 (485)
T KOG0569|consen 200 LLPFL 204 (485)
T ss_pred HHhcC
Confidence 55444
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.83 E-value=4.3e-19 Score=180.77 Aligned_cols=160 Identities=13% Similarity=0.048 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
..+......+......+...+..+.++++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 345556666666667776777777789999999999999999999999999999999999995 9999999999999999
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++.++. .+.+.+++.|+++|++.+. .+...++++|.+|+++ |++..++.....
T Consensus 81 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 135 (366)
T TIGR00886 81 CLWAGLAV------------------QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALGLAAGWG 135 (366)
T ss_pred HHHHHHHh------------------hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHHHHHHHh
Confidence 98888763 1567888999999999665 4567889999999777 888888888777
Q ss_pred HHHHHHHHHHHhhhcc----------cccchHHHHH
Q 044175 176 TLAAVIGVTAIVYVST----------EKAWWGGFLI 201 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~----------~~g~~~~f~i 201 (537)
++|..+++.+++.+.. ..+||+.|++
T Consensus 136 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 136 NMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 7787777777665543 3479998833
No 75
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.83 E-value=7.4e-18 Score=176.12 Aligned_cols=354 Identities=13% Similarity=0.084 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhH-HHHHHHHHHHHHHHHHH
Q 044175 25 SLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFA-TCLIFGTLEVLALVMIT 100 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~-~~~~~~~~~~i~~~l~~ 100 (537)
+...+.+..+.++++.|+++++|+++.+++.+.++..+...+..|+.|+++||. +|||| .++++....+++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 445555666778899999999999999999999999999999999999999982 48855 56777788888877776
Q ss_pred HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 044175 101 VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAV 180 (537)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 180 (537)
..+..+. .....++++.+++.+++.+.......++..|..++.+ +|++..++.....++|..
T Consensus 89 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~~~~g~~ 150 (437)
T TIGR00792 89 TTPDFSA-------------TGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFGATLGGL 150 (437)
T ss_pred hCCCCCc-------------chHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHHHHHHHH
Confidence 5531000 1235667777888888888888888888888875322 177888887777777776
Q ss_pred HHHHHHhhhc-------ccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChh
Q 044175 181 IGVTAIVYVS-------TEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPE 253 (537)
Q Consensus 181 i~~~~~~~l~-------~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (537)
+++.+.+.+. +..+|+..+.+.+++..+..+..+...++.+++++++++
T Consensus 151 l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~------------------------ 206 (437)
T TIGR00792 151 LVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE------------------------ 206 (437)
T ss_pred HHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc------------------------
Confidence 6655544332 246899888877766555544433332221100000000
Q ss_pred hhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhh
Q 044175 254 ELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFS 333 (537)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 333 (537)
++ . +..+. + +++...|.+...+ ......+..........
T Consensus 207 --------------~~----~--~~~~~-------------~-----~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 245 (437)
T TIGR00792 207 --------------KK----L--SLKQI-------------F-----KALFKNDQLLILC---LAYLFYNLAFNIKNGVQ 245 (437)
T ss_pred --------------cC----C--CHHHH-------------H-----HHHhCCHHHHHHH---HHHHHHHHHHHHHcchh
Confidence 00 0 00000 0 0000011111111 11111111111111111
Q ss_pred heecc-ccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044175 334 VTQGA-YMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEV 412 (537)
Q Consensus 334 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~ 412 (537)
.+... ..+ . ....+.+..+..+..++..++..++.+ |+ ++.+.+..+..+.+++.....+..
T Consensus 246 ~~~~~~~~~-~----~~~~~~~~~~~~i~~ii~~~~~~~l~~----r~-------g~~~~~~~~~~~~~~~~~~~~~~~- 308 (437)
T TIGR00792 246 VYYFTYVLG-D----PELFSYMGSIAIVAGLIGVLLFPRLVK----KF-------GRKILFAGGILLMVLGYLIFFFAG- 308 (437)
T ss_pred heeEeeecC-C----hHHHHHHHHHHHHHHHHHHHHHHHHHH----Hh-------CcHHHHHHHHHHHHHHHHHHHHcc-
Confidence 11110 111 0 001112223334555555566555443 32 223445666666666665544321
Q ss_pred HHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccC-------cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 413 QRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAP-------AGMRTLSTSFTFLSLSFGNFLSSVFVD 485 (537)
Q Consensus 413 ~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~~g~~~~~~l~~ 485 (537)
.+.+...+..++.+++.+...+..+++..|..| ++.+|.+.|+.++...+|..+++.+.+
T Consensus 309 -------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 309 -------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123344455677788888888888888888765 567899999999999999999999999
Q ss_pred Hhhhhh
Q 044175 486 IINAVT 491 (537)
Q Consensus 486 ~i~~~~ 491 (537)
.+.+..
T Consensus 376 ~ll~~~ 381 (437)
T TIGR00792 376 LILGII 381 (437)
T ss_pred HHHHHc
Confidence 876543
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.83 E-value=1.6e-17 Score=170.42 Aligned_cols=155 Identities=12% Similarity=-0.061 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh----HHHHHHHHHHHHHHHHH
Q 044175 24 SSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF----ATCLIFGTLEVLALVMI 99 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~----~~~~~~~~~~~i~~~l~ 99 (537)
.++-.+++....++++.|++ ++|.|..++|++.+.+.+...++.++.|.++||+ ||+ +.+.++..+. ....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~---~~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF---AVAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH---HHHH
Confidence 34444555666778888984 5899999999999999999999999999999995 984 3332222111 1112
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
... .++.+.+++.|++.|++.+...|...++..|.. ++ |++.++......++|.
T Consensus 88 ~~~------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~------~~~a~~~~~~~~~lg~ 141 (382)
T PRK11128 88 WFG------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQ------IGLDYGKVRLWGSIAF 141 (382)
T ss_pred HHh------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hh------ccCCcchHHHHHHHHH
Confidence 221 136788888999999999999998888777652 22 5666777777788999
Q ss_pred HHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 180 VIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 180 ~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
+++|.+++++.+++|||..|++.+....+.
T Consensus 142 ~igp~lgg~l~~~~g~~~~f~~~~~~~~~~ 171 (382)
T PRK11128 142 VIGSALTGKLVSWFGEQAILWILTAGVASM 171 (382)
T ss_pred HHHHHHHHHHHHHcChhHHHHHHHHHHHHH
Confidence 999999999999899999998766544333
No 77
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.82 E-value=6.7e-18 Score=173.59 Aligned_cols=157 Identities=11% Similarity=-0.037 Sum_probs=119.5
Q ss_pred HHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 37 SMVLYFKN-EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 37 ~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
.+...+.+ ++|+|.+|.+++.++..+.+.++.++.|++.||+ |.|+++.++.++..+.+++++++.. +.
T Consensus 55 ~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~--~~------- 124 (462)
T PRK15034 55 AVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQ--NP------- 124 (462)
T ss_pred HHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHc--cc-------
Confidence 33445544 7999999999999999999999999999999995 9999999999999999988887520 00
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc-----
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVS----- 190 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~----- 190 (537)
.+++..+++.|++.|++ |...+.....+++++|+++ |++++++.....|+|..+++++.+.+.
T Consensus 125 -----~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~ 192 (462)
T PRK15034 125 -----NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGGLGNLGVSVMQLVAPLVIFVPVF 192 (462)
T ss_pred -----CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 13788999999999998 7788889999999999887 899999987666777766655544322
Q ss_pred c-------------cccchHHHHHHHHHHHHHHHHHHh
Q 044175 191 T-------------EKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 191 ~-------------~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
. ..+|+.++++..+..++..+..++
T Consensus 193 ~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 193 AFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 234666665555555444444443
No 78
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.82 E-value=5.5e-18 Score=173.84 Aligned_cols=156 Identities=14% Similarity=0.110 Sum_probs=113.7
Q ss_pred HHHHHhhhhcC--CchhhHHHHHHHH-----HHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Q 044175 37 SMVLYFKNEMH--FNLAGASNTLTNL-----MGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLH 109 (537)
Q Consensus 37 ~~~~yl~~~l~--~~~~~~~~~~~~~-----~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 109 (537)
+...++.++.. .++++.+.+.+.. .+...++.++.|+++||+ ||||++..+.++..++.+++.++.+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATIG 92 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhhH
Confidence 45555555543 4445555544432 233346789999999995 999999999999999998888764211000
Q ss_pred CCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 110 PPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
......++++|+++|++.+...+...++++|.+++++ |++..+....+..+|..+++.++..+
T Consensus 93 -----------~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 93 -----------IWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred -----------HHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012357889999999999999999999999999887 88899998888889999988877654
Q ss_pred c--------ccccchHHHHHHHHHHHHHH
Q 044175 190 S--------TEKAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 190 ~--------~~~g~~~~f~i~~~~~~~~~ 210 (537)
. +.++||..|.+.++..++..
T Consensus 156 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 156 SYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 3 35789999987766554443
No 79
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.82 E-value=1.1e-17 Score=178.17 Aligned_cols=380 Identities=15% Similarity=0.068 Sum_probs=215.0
Q ss_pred HHHHHHHHHhhhhc-----CCch--hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 044175 33 ANAISMVLYFKNEM-----HFNL--AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYS 105 (537)
Q Consensus 33 ~~~~~~~~yl~~~l-----~~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~ 105 (537)
+....+..++++.. ..+. .+.+++.++..+++.++.++.|+++|++ |||++++++.+++.+|.++++.+.
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-- 140 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-- 140 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh--
Confidence 45555555555422 1122 3448999999999999999999999995 999999999999999999999985
Q ss_pred cccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 044175 106 EKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTA 185 (537)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 185 (537)
+..+++++|+++|+|.|......+.+++|..|++. |+...+....+.++|..++..+
T Consensus 141 -----------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~ 197 (513)
T KOG0254|consen 141 -----------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCI 197 (513)
T ss_pred -----------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999888 9999999999999999998555
Q ss_pred Hhhhccc-ccchHHHHHHHHHHHHHHHHHHhcc--ccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhhhh
Q 044175 186 IVYVSTE-KAWWGGFLISSIVTFIGFIALVIGK--PFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINEKE 262 (537)
Q Consensus 186 ~~~l~~~-~g~~~~f~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (537)
+....+. ++||..+.+..+..++..+..++.. |++..+ +....+..+.+..... .+..+...+..+..
T Consensus 198 ~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~---~g~~~~a~~~l~~l~g---~~~~~~~~~~~~~~--- 268 (513)
T KOG0254|consen 198 NYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIE---KGRLEEAKRSLKRLRG---LSPEDVEVELELLK--- 268 (513)
T ss_pred hhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH---cCChHHHHHHHHHHhC---CCCcchHHHHHHHH---
Confidence 5444332 4899888877766555554433321 221111 1111111111111111 00000000110000
Q ss_pred ccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhhheeccccCC
Q 044175 263 RVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFSVTQGAYMDP 342 (537)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (537)
........ ..+ ++..|+++..+ ...|+......+..++.........+++..+.+..+.+.
T Consensus 269 -------------~~~~~~~~-~~~---~~~~~~~l~~~--~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~ 329 (513)
T KOG0254|consen 269 -------------IKLLVEAE-VAE---GKASWGELFSP--KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS 329 (513)
T ss_pred -------------HHHHHhhh-ccc---ccccHHHhcCc--chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC
Confidence 00000000 000 00112222211 122333222333333332111111112222222222211
Q ss_pred CCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 044175 343 QLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMP 422 (537)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g 422 (537)
+ ......+..+..++...+...+.|++. ++..+..|...+.+++++.+.............
T Consensus 330 ~-------~~~~~~~~~~v~~~~t~~~~~lvd~~g-----------Rr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~- 390 (513)
T KOG0254|consen 330 D-------TFLASIILGVVNFLGTLVATYLVDRFG-----------RRKLLLFGAAGMSICLVILAVVGVFALYYPNSS- 390 (513)
T ss_pred c-------hHHHHHHHHHHHHHHHHHHHHHHHHhc-----------cHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcc-
Confidence 1 111111112222222222223333332 335577788888888777666432211100000
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 423 PKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDI 486 (537)
Q Consensus 423 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~ 486 (537)
....+..++...++.........|..+.+..|.+|.+.|+.+.++....+++.+.+-......
T Consensus 391 -~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~ 453 (513)
T KOG0254|consen 391 -KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPF 453 (513)
T ss_pred -cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 113344444455555555666778888899999999999999999999999999886555444
No 80
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.82 E-value=1.6e-17 Score=171.12 Aligned_cols=167 Identities=14% Similarity=0.154 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 044175 19 FIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (537)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l 98 (537)
......+....+.+...+.++ .+.+++|.+..+.+++.+.+.++..++.++.|+++||+ ||||.+..+.++..++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLP-RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHH
Confidence 344445555555554444444 45678999999999999999999999999999999995 9999999999999999888
Q ss_pred HHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 044175 99 ITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLA 178 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (537)
+..+. +...+++.|+++|++.+...+...+++.|.+|+++ |++..++.+...++|
T Consensus 85 ~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~ 139 (392)
T PRK10473 85 CSLAE-------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCII 139 (392)
T ss_pred HHHhC-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHH
Confidence 77653 56778889999999999989999999999998777 899999998888999
Q ss_pred HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 179 AVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
..++|.+++.+.+..+|+..|++.++...+..+.
T Consensus 140 ~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 140 PVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence 9999999998888889999998877655544443
No 81
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.82 E-value=1.4e-17 Score=172.65 Aligned_cols=386 Identities=11% Similarity=0.070 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccch-hHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSR-FATCLIFGTLEVLAL 96 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-~~~~~~~~~~~~i~~ 96 (537)
-.+.+..++...++-...++++.|+++++|++..+.|++.+.+.++..+++++.|+++||+ || |+++.++.+...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 3456667777777777779999999999999999999999999999999999999999995 65 778888877777777
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcc--------cCCCCCChhhhhhhhhHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGA--------GQFDEKDPKGAKALASYF 168 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~--------~~~~~~~~~~~~~r~~~~ 168 (537)
.+..+.. +...+.+.|++.+++.+...+...+... |...... |.+.+
T Consensus 84 ~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~~ 138 (418)
T TIGR00889 84 FFAAQVT-------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRVM 138 (418)
T ss_pred HHHHHhc-------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceeee
Confidence 6666542 5667778888888887766665554422 2111111 34444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCC
Q 044175 169 NYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSL 248 (537)
Q Consensus 169 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 248 (537)
+ .+|.+++|.+++.+.....|. +|++.++..++..+..+. .++.++.+++++. +
T Consensus 139 G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~--~---------------- 192 (418)
T TIGR00889 139 G------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALT-LPDIPVAKSTAKM--S---------------- 192 (418)
T ss_pred h------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhc-CCCCCCCcccccc--C----------------
Confidence 3 478888888888774333344 455555444433333222 2221110000000 0
Q ss_pred CCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhH-HHHHHHHHHHHHhhh
Q 044175 249 PENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRM-MPILASTILMNTCLA 327 (537)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~ 327 (537)
..+ . ...++.+ ....+++... +..+..........
T Consensus 193 ------~~~-----------~----~~~~~~~----------------------~~k~~~~~~~~~~~~~~~~~~~~~~- 228 (418)
T TIGR00889 193 ------IKV-----------M----LGLDAFI----------------------LFKNKRMAIFFFFSMLLGAPLQITN- 228 (418)
T ss_pred ------HHH-----------H----hhhhHHH----------------------HhcCCCeeeHHHHHHHHHhHHHHHH-
Confidence 000 0 0000000 0000011001 11111111111111
Q ss_pred hcchhhheeccccCCCCC-ccc-cCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHH
Q 044175 328 QLQTFSVTQGAYMDPQLG-SIK-VPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMT 405 (537)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~ 405 (537)
.....+... .+.+...+ ++. ...+....+..+..++......++.+++ ++.+.+..+.++.+++..
T Consensus 229 ~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-----------g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 229 IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-----------GIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----------CcHHHHHHHHHHHHHHHH
Confidence 111111111 01111000 000 0112223333344444444555544333 334556677777766655
Q ss_pred HHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHH-HHHHHHHHHHHHHH
Q 044175 406 IAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTF-LSLSFGNFLSSVFV 484 (537)
Q Consensus 406 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~~g~~~~~~l~ 484 (537)
........ ....+.++...++.+++++...+....++.+.+|++.|++++|+.+ ...++|..+++.+.
T Consensus 297 l~~~~~~~-----------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 297 FFAYGDPE-----------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHcCcc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 54442100 0123345556788889988888998999999999999999999997 56889999999999
Q ss_pred HHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 485 DIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 485 ~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
+.+.+..+. .+.-+++..|.+.+++.++..+.++++.+
T Consensus 366 G~l~~~~g~-------------~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 366 GVMVEKMFA-------------YGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHhcc-------------ccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 977643311 00113566677777777777666666554
No 82
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=7.5e-17 Score=170.57 Aligned_cols=177 Identities=11% Similarity=0.093 Sum_probs=139.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhcc-----chhHH-H
Q 044175 12 GGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFL-----SRFAT-C 85 (537)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-----Gr~~~-~ 85 (537)
.++|..+.++...+......+.....++.|+++ .|.+.++.+.... .... +++.++.|.++|| + ||||. +
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~l 84 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDR-YTPPFLGRRRGWL 84 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHc-ccccCCCCchHHH
Confidence 355667778888888888888788888888764 5999999988632 2222 3689999999999 7 99986 6
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhh
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
..+.+...++...+++... ..+...+.+.+++.+++.+...+...++..|++|+++ |+
T Consensus 85 l~~~i~~~~~~~~~a~~~~----------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg 142 (491)
T PRK11010 85 LATQLLLLVAIAAMGFLEP----------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RG 142 (491)
T ss_pred HHHHHHHHHHHHHHHHcCC----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hH
Confidence 6777777777777766531 1367788888999999999999999999999999777 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcc-cccchHHHHHHHHHHHHHHHHHH
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIVYVST-EKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
++.++...+..+|..+++.+++++.+ ..|||..|++.++..++..+..+
T Consensus 143 ~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 143 AGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999888999999999999999888 47999999987766555544433
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=6.1e-18 Score=171.77 Aligned_cols=149 Identities=11% Similarity=0.110 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Q 044175 30 GFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLH 109 (537)
Q Consensus 30 ~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 109 (537)
.++.....+.+.+.+++|++..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.+ ..
T Consensus 14 ~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~------- 84 (355)
T TIGR00896 14 PALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA------- 84 (355)
T ss_pred CccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-------
Confidence 3344444455567789999999999999999999999999999999995 99999999998888877665 33
Q ss_pred CCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 110 PPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
.+...+++.|++.|++.+...+..+..+.|.++ ++ |++++++.+...++|..+++.+++.+
T Consensus 85 ------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 85 ------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 256778899999999999988888888888876 44 78899998888899999999998888
Q ss_pred cccc--cchHHHHHHHHHH
Q 044175 190 STEK--AWWGGFLISSIVT 206 (537)
Q Consensus 190 ~~~~--g~~~~f~i~~~~~ 206 (537)
.+.. +||..|.+.+...
T Consensus 146 ~~~~~~~w~~~f~~~~~~~ 164 (355)
T TIGR00896 146 AQHSGGHWQQALAWWALPA 164 (355)
T ss_pred HHhhhhhHHHHHHHHHHHH
Confidence 7654 3888887655433
No 84
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.81 E-value=1.2e-17 Score=164.12 Aligned_cols=389 Identities=11% Similarity=-0.015 Sum_probs=238.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
++|.++.-.. .+.-.+.--.+...+..++++++|+|++|.+++..+-.+...+..++-|.+.||+ |.|++..++.++.
T Consensus 12 ~~~~L~~S~~-af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTL-AFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHH-HHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHH
Confidence 4444443333 3333333333445666788899999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.+-.+..+++... .+.+.+++.+++.|++ |...++..+.+++.||+++ .+.+++++.
T Consensus 90 ~IP~~~~~~a~~~----------------~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~AlGI~g 146 (417)
T COG2223 90 LIPCLGLAFAVTY----------------PSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGLALGIAG 146 (417)
T ss_pred HHHHHHHHHHccC----------------CchHHHHHHHHHHhcc-cceehcccccccccCChhh------hhHHHHHhc
Confidence 9999999988632 2446899999999998 5556888889999999988 899999988
Q ss_pred HHHHHHHHHHHHHHhhhccccc---chHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCC
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKA---WWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLP 249 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g---~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 249 (537)
..|+|..+...+++.+....+ |+....+..+..++..+..++..++.++.++..++..+
T Consensus 147 -~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~----------------- 208 (417)
T COG2223 147 -AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP----------------- 208 (417)
T ss_pred -cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-----------------
Confidence 999999999999999888888 88888877777777666665554433322221111100
Q ss_pred CChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhc
Q 044175 250 ENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQL 329 (537)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 329 (537)
..++ .+...+.+.++..+-..+..-++.+...
T Consensus 209 ---------------------------~~~~---------------------~v~~~~~~W~lsllY~~tFG~Fvgfs~~ 240 (417)
T COG2223 209 ---------------------------AQLK---------------------AVFSNKDTWLLSLLYFATFGGFVGFSAY 240 (417)
T ss_pred ---------------------------hHHH---------------------HHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0000111111111111121112222211
Q ss_pred chhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 044175 330 QTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGF 409 (537)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~ 409 (537)
.+.+.....+.+ ....+......++...+.-|+-.++.|++ +..+.+...+..++++....+.
T Consensus 241 l~~~~~~~fg~~------~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-----------Gg~rv~~~~f~~~~~~~~~l~~ 303 (417)
T COG2223 241 LPMYLVTQFGLS------PVTAGLIAFLFPLIGALARPLGGWLSDRI-----------GGRRVTLAVFVGMALAAALLSL 303 (417)
T ss_pred HHHHHHHhcCCC------hhhHHHHHHHHHHHHHHHHhccchhhhhc-----------cchhHHHHHHHHHHHHHHHHHc
Confidence 121111111111 12222333334444445555555544443 3445566666666666666555
Q ss_pred HHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 410 VEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINA 489 (537)
Q Consensus 410 ~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~ 489 (537)
.... ..+ +.+.+.....++.+++..+..+-..+-.+..++|+ +-|...|+.....++|++.-|...+...+
T Consensus 304 ~~~~-----~~~---~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~ 374 (417)
T COG2223 304 FLTG-----FGH---GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLD 374 (417)
T ss_pred cccc-----ccc---CcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHH
Confidence 3211 000 11222222223333333334444445555566655 57788999999999998888877777664
Q ss_pred hhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 490 VTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAW 536 (537)
Q Consensus 490 ~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~ 536 (537)
.++ .+...|+++..+.+++.+..+...+|
T Consensus 375 ~tg------------------~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 375 LTG------------------SYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred hcc------------------cHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 442 24556888888888888877766543
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.80 E-value=8.6e-17 Score=169.25 Aligned_cols=356 Identities=15% Similarity=0.100 Sum_probs=228.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.+..+.+..++.+++...-..-++-++ .++.-|+...+.+..+..+...+..+++|.++||+ .|||+++.+.++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 3445555666666666554434444333 45666888999999999999999999999999995 999999999988777
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
..+.+.+..... ..+.+.+++.-++.|++.+...|...+++.|..|+++ ..++.++....
T Consensus 88 ~~~~L~~l~~~~--------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~ 147 (524)
T PF05977_consen 88 VALLLAVLAFFG--------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSIS 147 (524)
T ss_pred HHHHHHHHHHhC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHH
Confidence 665555432111 1366788888899999999999999999999999877 88999999999
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhh
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEE 254 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (537)
.|+...+||.++|.+....|-...|.+.++..++.+..+...+++.++ ++.+.+...+-++.
T Consensus 148 ~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l~~--------------- 209 (524)
T PF05977_consen 148 FNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSALRE--------------- 209 (524)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhHHH---------------
Confidence 999999999999999888888889999887766555444433322111 10000000000000
Q ss_pred hhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhh---hhcch
Q 044175 255 LYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCL---AQLQT 331 (537)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~ 331 (537)
-.++. ...+.+...+. ...++.... ....+
T Consensus 210 --------------------G~ryv------------------------~~~~~l~~~l~---~~~~~~l~~~a~~aLlP 242 (524)
T PF05977_consen 210 --------------------GLRYV------------------------RSSPPLRSVLL---RSFLFNLFASAVWALLP 242 (524)
T ss_pred --------------------HHHHH------------------------hcchHHHHHHH---HHHHHHHhhhHHHHhhh
Confidence 00000 00011111111 111111111 11111
Q ss_pred hhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044175 332 FSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVE 411 (537)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~ 411 (537)
.+..+ ..+.. ....+.+....+++.++.+.+..+ .+|. .+..+.+..+.++.+++++..++.
T Consensus 243 l~a~~--~l~~~----a~~yGll~a~~gvGai~Gal~~~~-----l~~~------~~~~~lv~~~~~~~a~~~~~lal~- 304 (524)
T PF05977_consen 243 LFARD--VLGGG----ASGYGLLLAAFGVGAILGALLLPR-----LRRR------LSSRRLVLLASLLFALALLLLALS- 304 (524)
T ss_pred HHHHH--HhCCc----HHHHHHHHHHHHHHHHHHHHHHHH-----hhcc------cCcchhhHHHHHHHHHHHHHHhcc-
Confidence 11111 11111 111223333444555554444333 2222 234455666777777777666653
Q ss_pred HHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 412 VQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINA 489 (537)
Q Consensus 412 ~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~ 489 (537)
.+.+..++..++.|++........++...+..|+++||+..+++.+....+..+|..+.+.+.+
T Consensus 305 --------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 --------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2445666678888999999999999999999999999999999999999999999999887764
No 86
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.79 E-value=1.8e-16 Score=163.86 Aligned_cols=171 Identities=15% Similarity=0.078 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
+++.+.+.-+...+.+ ++...+.+.+++++|.++.+.+++.+.+.++..++.++.|++.||+ |||+++.++.++++++
T Consensus 4 ~~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 3444555555555554 4544555667899999999999999999999999999999999995 9999999999999999
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++..+.. .+++..+++.|++.|+|.|...+..++++.+..|+++ |++..+..+...
T Consensus 82 ~~l~~~~~~----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 139 (410)
T TIGR00885 82 AFLFWPAAE----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFN 139 (410)
T ss_pred HHHHHHHHh----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHH
Confidence 887654421 1367889999999999999999999999999888766 677788888888
Q ss_pred HHHHHHHHHHHhhhccc--------------------------ccchHHHHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTE--------------------------KAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~--------------------------~g~~~~f~i~~~~~~~~~ 210 (537)
++|..++|.+++.+... .+||.+|++.+++.++..
T Consensus 140 ~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 140 PFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888766321 369999977666544433
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.77 E-value=1.8e-16 Score=160.96 Aligned_cols=156 Identities=12% Similarity=0.082 Sum_probs=118.1
Q ss_pred HHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc----cchhHHH-HHHHHHHHHHHHHHHHHhhccccC
Q 044175 35 AISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF----LSRFATC-LIFGTLEVLALVMITVQAYSEKLH 109 (537)
Q Consensus 35 ~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~----~Gr~~~~-~~~~~~~~i~~~l~~~~~~~~~~~ 109 (537)
.....+.+.+++|+|.++.++.... .+...+ .++.|.++||+ +||||.+ +.+.++.++....+.+...
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----- 79 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----- 79 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----
Confidence 3444445556789999999999655 344444 89999999994 3899974 5667777777666655421
Q ss_pred CCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 110 PPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
..+...+....++.+++.+...+...+++.|.+|+++ |+++.++...+.++|.++++.+++++
T Consensus 80 -----------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 80 -----------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1245556666677888888888999999999998777 89999999999999999999999988
Q ss_pred ccccc--------chHHHHHHHHHHHHHHHHHH
Q 044175 190 STEKA--------WWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 190 ~~~~g--------~~~~f~i~~~~~~~~~~~~~ 214 (537)
....+ ||..|++.++..++..+..+
T Consensus 143 ~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 143 ASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred hhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 87777 99999988876655554433
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.75 E-value=4.8e-15 Score=153.23 Aligned_cols=166 Identities=8% Similarity=0.052 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhcc-----chhH-HHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFL-----SRFA-TCLIFGTLEV 93 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-----Gr~~-~~~~~~~~~~ 93 (537)
++..-+.....+.-...-+|.|+++ .|++.++.|++...... .+..++.|+++|| + |||| .+.++.++.+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~ 79 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLA 79 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHH
Confidence 3445556666666667788889875 59999999999666554 6999999999999 6 7776 6888888888
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++...+.+... ..+.+.+.+..++.+...+...+...+++.|.+|+++ |+++.++...
T Consensus 80 l~~~~l~~~~~----------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~ 137 (402)
T PRK11902 80 ASIAAMAFCPP----------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVL 137 (402)
T ss_pred HHHHHHHhcCc----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHH
Confidence 88777766521 1245666667677788888889999999999999877 8999999888
Q ss_pred HHHHHHHHHHHHHhhhccc-ccchHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTE-KAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~-~g~~~~f~i~~~~~~~~~~ 211 (537)
+.++|..+++.+++++.+. .|||..|++.++..++..+
T Consensus 138 g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 138 GYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 8899999999998888775 5999999987765544443
No 89
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.75 E-value=4.1e-15 Score=154.07 Aligned_cols=434 Identities=13% Similarity=0.025 Sum_probs=234.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhh---ccchhHHHHHH-HHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDT---FLSRFATCLIF-GTL 91 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~---~~Gr~~~~~~~-~~~ 91 (537)
.+..+....+--.+++-...+++++|+ +++|.+..+.+.+..+..+...+.+|+.|+++|| .+||||.++++ .+.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 344555555666677666677788877 5799999999999999999999999999999994 24999999885 555
Q ss_pred HHHHHHHHHHHhhccc-cCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 92 EVLALVMITVQAYSEK-LHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
.+++.++++.+..... +.+...+++ +......+.++..+..++.....+...++++|..|+++++ ++.+.++
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~---~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~~ 156 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKT---KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANAY 156 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHHH
Confidence 6666666666532110 000000000 0001133444555566677878888899999999977621 3578888
Q ss_pred HHHHHHHHHHHHHHHHhhhc--cc-------------ccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVS--TE-------------KAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQ 235 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~--~~-------------~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 235 (537)
.....++|+.+++.++++.. +. .+.+..|++.+++.++......+..+|.+..++++.+ ++
T Consensus 157 ~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~-~~--- 232 (477)
T TIGR01301 157 FSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFI-NS--- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccch-hh---
Confidence 88899999999999888641 11 1567889988887776666655544432211111000 00
Q ss_pred HHHHHHHhccCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHH
Q 044175 236 VVVVAIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPI 315 (537)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 315 (537)
+. + ++ ++. .+...+.+ -|+... +-.|...+....
T Consensus 233 ------------------~~-~--~~------~~~--~~~~~~~~-------------i~~~~~----~mP~~m~~l~~v 266 (477)
T TIGR01301 233 ------------------EA-A--PP------SKH--GEEAFFGE-------------LFGAFK----YLPRPVWILLLV 266 (477)
T ss_pred ------------------hc-c--cc------ccc--chhhhHHH-------------HHHHHH----HCCHHHHHHHHH
Confidence 00 0 00 000 00000000 000000 000111122222
Q ss_pred HHHHHHHHHhhhhcchhhheec-cccCCCCC-cc--ccC-CCcccccchHhHHHHhhhhcchhccccccccCCCCCCCch
Q 044175 316 LASTILMNTCLAQLQTFSVTQG-AYMDPQLG-SI--KVP-TPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQL 390 (537)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~-~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~ 390 (537)
-.+...-|..+..+.|.++-+. .+-+.... .+ +.. ......++.+...+...+.++ +.||.. ..
T Consensus 267 qffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~----l~~~~g-------~~ 335 (477)
T TIGR01301 267 TCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEK----LCRGWG-------AG 335 (477)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhc-------cc
Confidence 2222222333333333322110 00000000 00 000 001111122222222222222 334432 11
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhhhhccCC----C-ccch-HHHHHHHHHHHHHHHHHHhhhhHHHhhhccCc--ch
Q 044175 391 QRV-GVGLVLSAVSMTIAGFVEVQRRNAFNQMP----P-KQIS-LFWLSFQYCIFGIADMFTLVGLLEFFYKEAPA--GM 461 (537)
Q Consensus 391 ~~i-~~g~~l~~~~~~~~~~~~~~~~~~~~~~g----~-~~~~-~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~--~~ 461 (537)
+.. .++.++.++++....+......+..+.++ . .+.. .+.....+.+.|+.........++++.+..|+ +-
T Consensus 336 k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 336 KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 223 56777777787766654321000001000 0 0112 35566678888999999999999999999995 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 462 RTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 462 rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.|..+|+.|.+..+..++.....+.+....+ ++....+.+.++.++++.+..++...
T Consensus 416 ~G~~mgilN~~I~lpQii~sl~~g~~~~~~g-----------------~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG-----------------GGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHcC-----------------CCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 5999999999999999998877766543321 12233456666666666666655543
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=3.7e-16 Score=150.65 Aligned_cols=116 Identities=16% Similarity=0.074 Sum_probs=103.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHH
Q 044175 49 NLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFY 128 (537)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (537)
+..-.|.+-+.|.+...+.++..|.++||+ |||++++.|++..++...+.+.+. ++..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~-------------------~F~afv 125 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR-------------------NFAAFV 125 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-------------------HHHHHH
Confidence 444568888999999999999999999996 999999999999999888777774 677788
Q ss_pred HHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 129 ASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 129 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
++|++.|+..|-. ....++++|..++++ |+.+++....+..+|.++||+++|++..
T Consensus 126 ~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 126 LARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 8899999998775 667899999999887 8999999999999999999999999987
No 91
>PRK09848 glucuronide transporter; Provisional
Probab=99.71 E-value=2.9e-14 Score=149.62 Aligned_cols=153 Identities=14% Similarity=0.078 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhHHH-HHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFATC-LIFGTLEVLA 95 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~-~~~~~~~~i~ 95 (537)
-....+..++.+..+.++++.|+++.+|++..++|.+.....+...+..|+.|+++||. +||||.. .++.+...+.
T Consensus 13 yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 13 YSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred hccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 33456667777777778888999999999999999999999999999999999999993 3777755 5565555555
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH--
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL-- 173 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-- 173 (537)
.+++...+ ..+.+ .......++..++.+++.+...+...++..|..++.+ + |.+..++..+
T Consensus 93 ~~~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~--~---r~~~~~~r~~~~ 155 (448)
T PRK09848 93 SVLVFWVP--TDWSH----------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ--S---RARLGAARGIAA 155 (448)
T ss_pred HHHHHhCc--CCCCc----------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH--H---HHHHHHHHHHHH
Confidence 54443221 00000 1123444555567788888888888888777766432 2 4454444332
Q ss_pred ---HHHHHHHHHHHHHhhh
Q 044175 174 ---TTTLAAVIGVTAIVYV 189 (537)
Q Consensus 174 ---~~~~g~~i~~~~~~~l 189 (537)
..+++..++|.+.+..
T Consensus 156 ~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 156 SLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 2345666677666543
No 92
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.70 E-value=3.1e-14 Score=150.22 Aligned_cols=146 Identities=8% Similarity=0.012 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhh----hccch-hHHHHHHHHHHHHHH
Q 044175 22 VLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISD----TFLSR-FATCLIFGTLEVLAL 96 (537)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Gr-~~~~~~~~~~~~i~~ 96 (537)
+..+..++.+..+.++++.|+++.+|+++..+|.+..+..+...+..|+.|+++| | +|| |+-++++.+..+++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHHHH
Confidence 4455566777777888999999999999999999999999999999999999999 6 498 555666777777776
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
+++... |+.. ......++++..++.+++.........++.+|..++.+ +|.+..++.....+
T Consensus 92 ~llf~~---p~~~----------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~~~~~ 153 (473)
T PRK10429 92 FLLFSA---HLFE----------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPRFFAS 153 (473)
T ss_pred HHHHcC---CCCC----------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHHHHHH
Confidence 666432 1110 01134455566667778888888888899999875322 17788887666667
Q ss_pred HHHHHHHHHH
Q 044175 177 LAAVIGVTAI 186 (537)
Q Consensus 177 ~g~~i~~~~~ 186 (537)
+|+.+.+.+.
T Consensus 154 ig~~~~~~~~ 163 (473)
T PRK10429 154 LAGFVTAGFT 163 (473)
T ss_pred HHHHHHHHHH
Confidence 7755554443
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.6e-14 Score=139.85 Aligned_cols=144 Identities=15% Similarity=0.048 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 044175 25 SLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAY 104 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~ 104 (537)
|+-..........+.+.+++.++++..|++.+..++..++.++.++.|++.+|+ |+|+.+++|+.++++|..+..=++.
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333333345667788889999999999999999999999999999999999995 9999999999999999988865432
Q ss_pred ccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 044175 105 SEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVT 184 (537)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 184 (537)
..++..++++.++.+.|.|......+++++...++++ ..+-++.......+|+.++|.
T Consensus 101 ----------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~ 158 (422)
T COG0738 101 ----------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGPL 158 (422)
T ss_pred ----------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHHH
Confidence 2478899999999999999999999999999998765 455567777788899999999
Q ss_pred HHhhhcc
Q 044175 185 AIVYVST 191 (537)
Q Consensus 185 ~~~~l~~ 191 (537)
+++++..
T Consensus 159 ~g~~lil 165 (422)
T COG0738 159 LGSSLIL 165 (422)
T ss_pred HHHHHHH
Confidence 9988765
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.70 E-value=5.3e-15 Score=149.56 Aligned_cols=154 Identities=8% Similarity=0.009 Sum_probs=133.5
Q ss_pred HHHHHHHhhhhcCCchhh-HHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 044175 35 AISMVLYFKNEMHFNLAG-ASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDC 113 (537)
Q Consensus 35 ~~~~~~yl~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 113 (537)
.++..+|+.+++|+++++ .|.+.+++..++.++.+++|+++||+ |.|+++.++.+.+.+..++++++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~---------- 113 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGT---------- 113 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH----------
Confidence 456778999999999999 99999999999999999999999995 999999999999999999999875
Q ss_pred CCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 044175 114 GKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK 193 (537)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 193 (537)
+...+.+.|++.|++.|... ....++..++|+++ |+++.++...+.++|.++++++++++ ..+
T Consensus 114 ---------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~qll-~s~ 176 (511)
T TIGR00806 114 ---------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQLL-VTL 176 (511)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 67899999999999999999 99999999999877 99999999999999999999999985 457
Q ss_pred cchHHHHH---HHHHHHHHHHHHHhc
Q 044175 194 AWWGGFLI---SSIVTFIGFIALVIG 216 (537)
Q Consensus 194 g~~~~f~i---~~~~~~~~~~~~~~~ 216 (537)
||+.-+.+ ......++++..++.
T Consensus 177 gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 177 GWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 88875544 344444444444443
No 95
>PRK09669 putative symporter YagG; Provisional
Probab=99.69 E-value=2.7e-14 Score=149.55 Aligned_cols=171 Identities=9% Similarity=0.101 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhH-HHHHHHHHHHHHHH
Q 044175 22 VLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFA-TCLIFGTLEVLALV 97 (537)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~-~~~~~~~~~~i~~~ 97 (537)
...+..++.+..+..+++.|+++.+|++..+++.+..+..+...+..|+.|+++||. +|||| .++++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~ 95 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL 95 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence 344555666666778899999999999999999999999999999999999999992 37754 45567777777766
Q ss_pred HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH
Q 044175 98 MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL 177 (537)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (537)
++...+ +... .....++++..++.+.+.........++.+|..++.+ +|.+..++.....++
T Consensus 96 l~f~~p---~~~~----------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~~~~~~ 157 (444)
T PRK09669 96 LTFYTP---DFGA----------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRFALSFI 157 (444)
T ss_pred HHHhCC---CCCc----------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHHHHHHH
Confidence 554432 1100 1245566666666676666777777888999875422 277777777777777
Q ss_pred HHHHHHHHHh----hhcc---cccchHHHHHHHHHHHHHH
Q 044175 178 AAVIGVTAIV----YVST---EKAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 178 g~~i~~~~~~----~l~~---~~g~~~~f~i~~~~~~~~~ 210 (537)
|..+++.+.. ++.. ..+|+..+.+.+++..+..
T Consensus 158 G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 158 GGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF 197 (444)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH
Confidence 7777665433 2221 2467766665555444433
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.69 E-value=3.1e-14 Score=149.64 Aligned_cols=148 Identities=17% Similarity=0.101 Sum_probs=116.5
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 37 SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
....++.+++|-+ ....|+.+...+...+..++.|.|+|.+ |||..++.+.++..+|.+.++.+.
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------- 129 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------- 129 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC-------------
Confidence 4456788889865 6677888999999999999999999995 999999999999999999999774
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccch
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWW 196 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~ 196 (537)
+...++.+..+.|+|.|.... ....++|..|.+. |...........-.....+|.++..+..+.+||
T Consensus 130 ------~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 130 ------NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred ------cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 778899999999999877754 4556899998766 655555444443344445666766666667899
Q ss_pred HHHHHHHHHHHHHHHH
Q 044175 197 GGFLISSIVTFIGFIA 212 (537)
Q Consensus 197 ~~f~i~~~~~~~~~~~ 212 (537)
|.|++..+...++++.
T Consensus 197 w~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVL 212 (599)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 9999988766555444
No 97
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.68 E-value=4.5e-14 Score=151.02 Aligned_cols=140 Identities=14% Similarity=0.014 Sum_probs=123.8
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCch
Q 044175 44 NEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGI 123 (537)
Q Consensus 44 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (537)
+..+.+........+++.++..+++++.|+++|| +|||+++++++++..++.++.+++. +
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------N 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------c
Confidence 4566677888999999999999999999999999 5999999999999999998888884 8
Q ss_pred hHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHH
Q 044175 124 AAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISS 203 (537)
Q Consensus 124 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~ 203 (537)
+..+++.|++.|++.++...+...+++|.+++++ |+.+.++ ......++.+++..++++.. +||+.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 8999999999999999999999999999999888 8888888 77777888888888888876 8999998877
Q ss_pred HHHHHHHHH
Q 044175 204 IVTFIGFIA 212 (537)
Q Consensus 204 ~~~~~~~~~ 212 (537)
+...+.++.
T Consensus 242 ~~~~~~~~~ 250 (521)
T KOG0255|consen 242 IPSGLFLLL 250 (521)
T ss_pred HHHHHHHHH
Confidence 766555444
No 98
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.68 E-value=2.9e-15 Score=145.46 Aligned_cols=149 Identities=13% Similarity=0.029 Sum_probs=134.7
Q ss_pred hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchh
Q 044175 45 EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIA 124 (537)
Q Consensus 45 ~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (537)
+++-++.+.|++..++.+.+.+..|+.|.+.|| +|+|-.+++|..+...++++.++.. ++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~-------------------sy 159 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN-------------------SY 159 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc-------------------hh
Confidence 456678899999999999999999999999999 5999999999999999999999874 78
Q ss_pred HHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHH
Q 044175 125 AYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSI 204 (537)
Q Consensus 125 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~ 204 (537)
++++++|.+||+|.+....+..++++|.||+++. |+++++..-....+|-.+||..+|.+-+..|.+.+|++.+.
T Consensus 160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~ 234 (464)
T KOG3764|consen 160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI 234 (464)
T ss_pred HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence 8999999999999999999999999999997763 89999998889999999999999999999999999999888
Q ss_pred HHHHHHHHHHhccc
Q 044175 205 VTFIGFIALVIGKP 218 (537)
Q Consensus 205 ~~~~~~~~~~~~~~ 218 (537)
++++...+.++..+
T Consensus 235 v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 235 VLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHHHHheeC
Confidence 88777666555433
No 99
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=3.1e-14 Score=149.54 Aligned_cols=179 Identities=13% Similarity=0.052 Sum_probs=130.5
Q ss_pred CcchH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc-----hhHHHH
Q 044175 13 GFRAC-GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS-----RFATCL 86 (537)
Q Consensus 13 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----r~~~~~ 86 (537)
+++.. ..+....+.+.+. +.+...+..++++++|+++++.+...+...+...+-++ .|.++||+ + ||+.+.
T Consensus 23 ~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~ 99 (468)
T TIGR00788 23 HPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLV 99 (468)
T ss_pred CcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHH
Confidence 34433 4445467777777 77777888899999999999999998888888877555 99999995 8 777778
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 87 IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 87 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
++.++.. ...+..++.. ........+.+++.+++.+......-++..|..+ ++++ .++.
T Consensus 100 ~~~~l~~-~~~~~~l~~~----------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~ 158 (468)
T TIGR00788 100 LSGLLGS-AILYGLLPGK----------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPS 158 (468)
T ss_pred HHHHHHH-HHHHHhcccc----------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCC
Confidence 8776653 1222222210 1123344457788999999999999999999998 4422 1455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
..++.|.+.++|..+++.++|.+.+..+|+..|++.+.+.++..+...+
T Consensus 159 ~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~ 207 (468)
T TIGR00788 159 LVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNL 207 (468)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHh
Confidence 6667777788999999999999998889999998877766555443333
No 100
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.67 E-value=1.1e-14 Score=151.82 Aligned_cols=355 Identities=14% Similarity=0.097 Sum_probs=213.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhh----hccchhHHHH-HHHHHHHHHHHHH
Q 044175 25 SLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISD----TFLSRFATCL-IFGTLEVLALVMI 99 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD----~~~Gr~~~~~-~~~~~~~i~~~l~ 99 (537)
+...+.+.....++..|+++.+|+++...+.+..+..+...+..|+.|+++| | +||||-.+ ++.++.+++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHHh
Confidence 4444555556678889999999999999999999999999999999999999 7 59777655 5677788877777
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
..... .++. ......++.+..++..++.........++.+|..+++++ |.+..++......+|.
T Consensus 90 f~~~p-~~~~----------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~~~~g~ 153 (428)
T PF13347_consen 90 FSPPP-AGLS----------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIFSMIGS 153 (428)
T ss_pred hcccc-chhh----------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHHHHHHH
Confidence 65410 0100 012344556777778899999999999999999875431 7777777777777777
Q ss_pred HHHHHHHhhhcc----c---ccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCCh
Q 044175 180 VIGVTAIVYVST----E---KAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENP 252 (537)
Q Consensus 180 ~i~~~~~~~l~~----~---~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (537)
.+...+.+.+.+ . .+|++...+.+++..+..++..+..|+.+++.++++
T Consensus 154 ~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~------------------------ 209 (428)
T PF13347_consen 154 LLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE------------------------ 209 (428)
T ss_pred HHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccc------------------------
Confidence 655555544432 1 157777666666555554444443333000000000
Q ss_pred hhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchh
Q 044175 253 EELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTF 332 (537)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (537)
++.+..+ .++... + .|.....+ ....+.+.......+.
T Consensus 210 ---------------~~~~~~~-------------------~~~~~~----~-nr~~~~l~---~~~~~~~~~~~~~~~~ 247 (428)
T PF13347_consen 210 ---------------KKISLRD-------------------SLRSLF----R-NRPFRILL---LAFFLQWLAFALMNTF 247 (428)
T ss_pred ---------------ccccccc-------------------chhhhc----c-cchHHHHH---HHHHHHHhhhhhhhhH
Confidence 0000000 000000 0 01111111 1111112211111111
Q ss_pred hheeccc-cCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044175 333 SVTQGAY-MDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVE 411 (537)
Q Consensus 333 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~ 411 (537)
..+.... .+.. ...+.+.....+..++..|+..++.+++.+| +.+..+..+.+++.++..+..
T Consensus 248 ~~y~~~~vl~~~-----~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----------~~~~~~~~~~~~~~~~~~~~~ 311 (428)
T PF13347_consen 248 LPYYFTYVLGNE-----GLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----------KVYIIGLLLAALGFLLLFFLG 311 (428)
T ss_pred HHHHHHHHhcCc-----hhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----------eehhhhHHHHHHHHHHHHHHH
Confidence 1111111 1111 0112223344555566666666644433322 345667777777766655542
Q ss_pred HHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccC-------cchhHHHHHHHHHHHHHHHHHHHHHH
Q 044175 412 VQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAP-------AGMRTLSTSFTFLSLSFGNFLSSVFV 484 (537)
Q Consensus 412 ~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~~~g~~~~~~l~ 484 (537)
+.+.++..+..++.+++.+...+..+++..|..+ ++..|...|++++...++..++..+.
T Consensus 312 -------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~ 378 (428)
T PF13347_consen 312 -------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIV 378 (428)
T ss_pred -------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHH
Confidence 1245667777889999999988888999888877 45579999999999999999999988
Q ss_pred HHhhhhh
Q 044175 485 DIINAVT 491 (537)
Q Consensus 485 ~~i~~~~ 491 (537)
+.+....
T Consensus 379 g~~l~~~ 385 (428)
T PF13347_consen 379 GLLLALV 385 (428)
T ss_pred HHHHHHh
Confidence 8776554
No 101
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.67 E-value=3.3e-20 Score=194.73 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=113.3
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHH
Q 044175 51 AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYAS 130 (537)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (537)
.+.+++.+...++..++.+++|+++||+ |||++++++.++..++.++..+++. ..+...+.++
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~----------------~~~~~~~~~~ 108 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS----------------YNNFWMLLIG 108 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc----------------cccccccccc
Confidence 3467889999999999999999999995 9999999999999999999988741 0157889999
Q ss_pred HHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc---cccchHHHHHHHHHHH
Q 044175 131 LCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST---EKAWWGGFLISSIVTF 207 (537)
Q Consensus 131 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~---~~g~~~~f~i~~~~~~ 207 (537)
|+++|++.|+..+..+.++.|..|++. |+...++......+|..++..++..+.. ..+||..+.++.+..+
T Consensus 109 R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l 182 (451)
T PF00083_consen 109 RFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSL 182 (451)
T ss_pred ccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999888 8888888887788888877766544432 2459998887776554
Q ss_pred HHH
Q 044175 208 IGF 210 (537)
Q Consensus 208 ~~~ 210 (537)
+..
T Consensus 183 ~~~ 185 (451)
T PF00083_consen 183 LVL 185 (451)
T ss_pred ccc
Confidence 333
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.66 E-value=1.5e-13 Score=141.52 Aligned_cols=176 Identities=13% Similarity=0.031 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHH--HHHHHHHHHHHhhHh-HHHhhhccchhHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNT--LTNLMGSTFLLCLVG-GFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~-G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
...+...-+...+.+....+.++.|++ +.|.+.++.|.+ .........+..|+. ++.+||+ ||||..++.+.+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 345566667777777777788888886 569999999997 355567776777777 6689995 99999766653322
Q ss_pred H-HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 94 L-ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 94 i-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
. ....+.... +. .....++.....+.++..+...+...++..|..++++ ++...+...
T Consensus 81 ~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~ 139 (390)
T TIGR02718 81 SACLASLALVG--PD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQI 139 (390)
T ss_pred HHHHHHHHcCC--cc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHH
Confidence 2 222222111 00 0122333444445556666666666666666655444 565666666
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.+..+|..+++...+++.+..||+..|++.++..++..+..+.
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999988888888899999999887766555444433
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.65 E-value=3.7e-13 Score=137.70 Aligned_cols=385 Identities=11% Similarity=0.083 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMI 99 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~ 99 (537)
+....++..+.+-...++++.|+++ .|+|..|.|.+.+...+...+.+++.|+++||...+||.+.++.++.++...+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 4445555556655667889999975 679999999999999999999999999999996347777777766666655444
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
... ++.+.+++..++..+......|...++..+...+++ .+-.|-|.. .++|-
T Consensus 86 ~~~-------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~--~~YG~iRlw------GSiGf 138 (400)
T PF03825_consen 86 AFS-------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRG--KDYGRIRLW------GSIGF 138 (400)
T ss_pred HHh-------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccc--CCCCcchhh------hhHHH
Confidence 443 255666666777777777777777777666654321 111133333 34444
Q ss_pred HHHHHH-Hhhhcccc---cchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhh
Q 044175 180 VIGVTA-IVYVSTEK---AWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEEL 255 (537)
Q Consensus 180 ~i~~~~-~~~l~~~~---g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (537)
.++... ++++.... +....+++.+....+..... +..|+.+.++..+++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~------------------------ 193 (400)
T PF03825_consen 139 IVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVK------------------------ 193 (400)
T ss_pred HHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcc------------------------
Confidence 433222 12222222 22334454443332222211 12222111000000000
Q ss_pred hhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhH-HHHHHHHHHHHHhhhhcchhhh
Q 044175 256 YEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRM-MPILASTILMNTCLAQLQTFSV 334 (537)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 334 (537)
+. ...| .|+.+ .+ |+.... +..++....... +..+.+.+.
T Consensus 194 -------------~~------~~~~-------------~~~ll-----k~-~~~~~Fll~~~l~~~~~~~-~~~f~~~yl 234 (400)
T PF03825_consen 194 -------------KL------LGLD-------------ALKLL-----KN-PRFLVFLLAAFLIGISHAA-YYTFFSIYL 234 (400)
T ss_pred -------------cc------cchH-------------HHHHh-----cC-ccHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 00 0000 00000 00 111111 111111111111 111222222
Q ss_pred eeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 335 TQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQR 414 (537)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~ 414 (537)
.+..+.. ...... ....+.+.|....-..+|..+| .+..+.+.++.+..++=..+++...
T Consensus 235 ~~~gg~~---------~~~~g~-----~~~l~~~aEi~~f~~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~a~~~--- 294 (400)
T PF03825_consen 235 QELGGYS---------GSTIGI-----LWALGVVAEIPFFFFSGRFLKR---FGIKWLLLLALVAYAVRWLLYAYFS--- 294 (400)
T ss_pred HHcccch---------hhHHHH-----HHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 2111111 000011 1111222232222222333222 3566667777766666555555431
Q ss_pred hhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhcc
Q 044175 415 RNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLS-LSFGNFLSSVFVDIINAVTKR 493 (537)
Q Consensus 415 ~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~~g~~~~~~l~~~i~~~~~~ 493 (537)
++ .+..+..+.+..++.|+..++...+...|+.+.+|++.|++++++++.. .++|..+|..+.+.+.+..+.
T Consensus 295 -----~~--~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~ 367 (400)
T PF03825_consen 295 -----DP--WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGA 367 (400)
T ss_pred -----CC--cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 00 0111222334456799999999999999999999999999999998875 679999999999987744322
Q ss_pred CCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 494 ITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAW 536 (537)
Q Consensus 494 ~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~ 536 (537)
++ .-.+..+|.+.+++.++..++++++.|+
T Consensus 368 --~~-----------~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 368 --RG-----------MFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred --hh-----------hhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 00 0123345667777777777777777664
No 104
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.64 E-value=1.1e-14 Score=157.83 Aligned_cols=199 Identities=14% Similarity=0.150 Sum_probs=150.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
.+|.+.+.+....+....+.+.......-+.++++++..+.|++.+.+.+++.++.++.|+++||+ ||||.+.++.+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~ 108 (633)
T TIGR00805 30 KIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIM 108 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHH
Confidence 345444444445555555666677777788899999999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccC----------------CCCCC------------CCCccCCc----hhHHHHHHHHHHHHhccc
Q 044175 93 VLALVMITVQAYSEKLH----------------PPDCG------------KSSCVKGG----IAAYFYASLCLYALGSGG 140 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~----------------~~~~~------------~~~~~~~~----~~~~~~~~~~l~g~g~g~ 140 (537)
++|.+++++......-+ +..|. ++.|.+.. ...+++++|+++|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 99999988753111000 00110 00222212 356788999999999999
Q ss_pred ccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc----------------------cchHH
Q 044175 141 VRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK----------------------AWWGG 198 (537)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~----------------------g~~~~ 198 (537)
..+...+++.|.+|+++ |+..+++++.+..+|.++|+++++++.+.+ +||..
T Consensus 189 ~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred chhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 99999999999999888 899999999999999999999999876532 27778
Q ss_pred HHHHHHHHHHHHHHHHhccc
Q 044175 199 FLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 199 f~i~~~~~~~~~~~~~~~~~ 218 (537)
|++.+++.++..+.++...+
T Consensus 263 Fli~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHHhCcc
Confidence 88877666555554444433
No 105
>PTZ00207 hypothetical protein; Provisional
Probab=99.64 E-value=1e-12 Score=139.10 Aligned_cols=171 Identities=13% Similarity=0.017 Sum_probs=124.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+|..+.....+..+.... |+. ......+++++|++..+.+++.++.. ....+.++.|+++||+ |||+++.++.+++
T Consensus 26 Rw~~lva~~~~~~~~g~~-y~f-sv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~ 101 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFM-YAF-NLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVF 101 (591)
T ss_pred hHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 333333334444444333 333 34455678999999999999887744 3446777899999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.+|.++++++.. ... ..+.+.+++.|++.|+|.+...+.....+.++|| ++ |+++.++..
T Consensus 102 ~iG~ll~ala~~--~~i-----------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~ 161 (591)
T PTZ00207 102 CLGTLLFALTFQ--EVI-----------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMK 161 (591)
T ss_pred HHHHHHHHHHhc--ccc-----------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHH
Confidence 999999988631 000 1367889999999999999988888889999997 44 899999999
Q ss_pred HHHHHHHHH-HHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVI-GVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 173 ~~~~~g~~i-~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
.+..+|+++ +++..+++. .+|+..|++.++..++.
T Consensus 162 ~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 162 TFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHH
Confidence 999999875 555566554 35666666655554443
No 106
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.60 E-value=1.1e-12 Score=126.61 Aligned_cols=364 Identities=12% Similarity=0.141 Sum_probs=230.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMI 99 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~ 99 (537)
++++.+--|-..-++ ..+..-+++++|+|.+++|.+++.-.+...+..++..+|+.|+ |.++.+..++++.++|.++-
T Consensus 17 Ivlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 333334444443333 3344566789999999999999999999999999999999995 99999999999999999887
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
... +...++.+-.+.|.|.+......|..+-+.||++. +..++.+..+.++|+
T Consensus 95 ~~~--------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~sl~~~a 147 (395)
T COG2807 95 SLG--------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTSLGAGA 147 (395)
T ss_pred hcc--------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHHHHHHH
Confidence 764 45678889999999999999999999999999654 778888888999999
Q ss_pred HHHHHHHhhhcccc-cchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhh
Q 044175 180 VIGVTAIVYVSTEK-AWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEI 258 (537)
Q Consensus 180 ~i~~~~~~~l~~~~-g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (537)
++++.++..+.++. ||+....+-+...+++++.++....+.+....+++
T Consensus 148 aLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~------------------------------ 197 (395)
T COG2807 148 ALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATK------------------------------ 197 (395)
T ss_pred HHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccccccccccc------------------------------
Confidence 99999888888776 79998877777777777776644211110000000
Q ss_pred hhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhhheecc
Q 044175 259 NEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFSVTQGA 338 (537)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 338 (537)
.. + +..-|++ .......+.+.+....+|..+.+++..+..+.
T Consensus 198 ----------~~---~----------------~~~vw~~--------~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G- 239 (395)
T COG2807 198 ----------LV---S----------------VRKVWRS--------PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG- 239 (395)
T ss_pred ----------cc---c----------------ccccccC--------chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-
Confidence 00 0 0012221 11122345555667777888888877665442
Q ss_pred ccCCCCCccccCCCcccccchHh---HHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 339 YMDPQLGSIKVPTPSIPVIPLLF---MSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRR 415 (537)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~---~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~ 415 (537)
++.. ..+.+-.+..+. .-+.+|+.. +|.. +..........++.++...+.+...+
T Consensus 240 -~sa~------~aG~llsl~~l~~~~~~ll~P~la-------~R~~------n~r~~~~~~~~~~l~G~~G~~~~P~~-- 297 (395)
T COG2807 240 -LSAA------EAGSLLSLMQLAQLPTALLIPLLA-------RRSK------NQRPLVVLALLLMLVGLVGLLLAPGQ-- 297 (395)
T ss_pred -CCHH------HhhhHHHHHHHHHHHHHHHHHHHH-------HHhc------ccchHHHHHHHHHHHHHHHHHHhhhh--
Confidence 2211 122222222222 222223322 2221 23334444555555665554443211
Q ss_pred hhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcch-hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 044175 416 NAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGM-RTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRI 494 (537)
Q Consensus 416 ~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~ 494 (537)
..++| .+++|+|.+..+|....++...+.+.. -+.-.|+.+....+-..+||.+.+.+-|.++
T Consensus 298 ----------~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g-- 361 (395)
T COG2807 298 ----------LPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG-- 361 (395)
T ss_pred ----------HHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC--
Confidence 22333 378899999999999999888766443 3444555555555555668888888776653
Q ss_pred CCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhc
Q 044175 495 TPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAA 534 (537)
Q Consensus 495 ~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~ 534 (537)
+|... ...+...+++..+.-+...
T Consensus 362 -----sw~~~-----------~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 362 -----SWSAP-----------LVLLALATLLMLIFGLRAG 385 (395)
T ss_pred -----ChHHH-----------HHHHHHHHHHHHHHHhhcc
Confidence 36443 5555555555555444433
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.59 E-value=2.6e-13 Score=136.65 Aligned_cols=387 Identities=10% Similarity=0.036 Sum_probs=206.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH-
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV- 93 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~- 93 (537)
+..+......+.-.+.+-...++.+.|++++.|++.+++|.+.++..+...+.+|+.|.++||. |.||-+++......
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 4556666666666666666779999999998999999999999999999999999999999995 97776555433322
Q ss_pred -HHHHHHH-HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 94 -LALVMIT-VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 94 -i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.+.+... ..+. ++ .+ +.++-++.++..+.......+. .|.+-++.++ +.+-=++-.
T Consensus 86 l~~pff~~v~~pl---l~------------~n---~~lg~iig~i~l~~~f~~~~~~-~Ea~~er~sr---~~~feYG~~ 143 (412)
T PF01306_consen 86 LFGPFFIYVFGPL---LQ------------SN---FWLGAIIGGIYLGLVFNAGVPL-SEAYAERVSR---RNGFEYGRA 143 (412)
T ss_dssp TCHHHHHHTHHHH---HH------------TT----HHHHHHTTTTTTTTTTTHHHH-HHHHHHHHHH---HHSS-HHHH
T ss_pred HHHHHHHHHHHHH---HH------------HH---HHHHHHHHHHHHHHHHcccchH-HHHHHHHHHH---HhcCCcchH
Confidence 2333322 2210 00 01 2223233333333333333222 1333222111 112223334
Q ss_pred HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCC
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPEN 251 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 251 (537)
.....+|.+++..++|++.+ .+-+..|+++....++..++.+..+++.+++.+..+.
T Consensus 144 R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~---------------------- 200 (412)
T PF01306_consen 144 RMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADA---------------------- 200 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTT----------------------
T ss_pred HHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcc----------------------
Confidence 45678898999999998876 3446677776655444444444443321111100000
Q ss_pred hhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcch
Q 044175 252 PEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQT 331 (537)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 331 (537)
+ . .+ .++.+..|-. ++-..|+++....+.......+..+.|+.+
T Consensus 201 ------------~-~-~~---~~~~~~~~~~-------------------~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~ 244 (412)
T PF01306_consen 201 ------------L-G-AK---KDKVSLKDVL-------------------SLFKMRNFWFFVLFVIGVAAIYDVFDQQFP 244 (412)
T ss_dssp ------------S-S-S---------HHHHH-------------------HHTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------c-c-cC---CCCCcHHHHH-------------------HHhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00 0000000000 000112233233323333333344433333
Q ss_pred -hhheeccccCCCCCccccCCCcccccchHhHH---HHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 044175 332 -FSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMS---ILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIA 407 (537)
Q Consensus 332 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---i~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~ 407 (537)
++..+.... +..+..+..++.+.++ +...+..+ +.+|. ++.+.+.++..++++=....
T Consensus 245 ~y~~~~f~~~-------~~g~~~~G~l~s~~v~~E~~~m~~~p~----li~ri-------g~k~~Lllag~i~~iRi~~~ 306 (412)
T PF01306_consen 245 IYFASFFQSA-------GQGNQMYGYLWSVQVFLEALMMFFSPW----LINRI-------GAKNLLLLAGVIMAIRIIGS 306 (412)
T ss_dssp HHHHHTSSSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHH--------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccc-------ccChhHHhHHHHHHHHHHHHHHHHHHH----HHHhc-------ChHhHHHHHHHHHHHHHHHH
Confidence 222111100 0111112222222222 11122222 23442 55666777766777666666
Q ss_pred HHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHH-HHHHHHHHHHHHHHHHH
Q 044175 408 GFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFT-FLSLSFGNFLSSVFVDI 486 (537)
Q Consensus 408 ~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~~g~~~~~~l~~~ 486 (537)
++. .+.+++++.-.+.++-..+......-|+.+.+|+++.++...+. ++..+++..+.+.+.+.
T Consensus 307 ~~~---------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 307 GFA---------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HT-----------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred hhh---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 653 45677888889999999899999999999999999998888874 68888999988777776
Q ss_pred hhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 487 INAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 487 i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
+.+. .|++..|++++++.++..++-.+..+
T Consensus 372 lyd~-------------------~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 372 LYDR-------------------IGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hHhh-------------------cCcHHHHHHHHHHHHHHHHHheeeec
Confidence 5532 34556788888888777766665544
No 108
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1.5e-13 Score=144.13 Aligned_cols=174 Identities=15% Similarity=0.127 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAIS---MVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~---~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|++++..+..++..+++..- +-..++++++-+..+++|+.++......+..|+.+.+.||+ |.|++.+.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 77777777777777776643 34456788999999999999999999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHH-HHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASL-CLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
|.++..++. +.+.+++.. ++.|+|.|+++......++.+|++ + |+.+.+....
T Consensus 124 g~~lssF~~-------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-k------R~lA~Gia~~ 177 (509)
T KOG2504|consen 124 GLLLSSFAT-------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-K------RALATGIAVS 177 (509)
T ss_pred HHHHHHHHh-------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-H------HHHHHhhhhc
Confidence 999999985 566666665 679999999999999999977763 3 7888888777
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
...+|..+-|.+..++.+.+|||..+++-..+.+-.+......+|
T Consensus 178 GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 178 GTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred cCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778898888889999999999999988766665444444444444
No 109
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.58 E-value=5.8e-14 Score=138.83 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=91.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHH
Q 044175 47 HFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAY 126 (537)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (537)
|+++.-.+.+..+..++..+++++.||++||+ |||+++...+++.+++++.+++.-. ..+| ..-..+
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~---~~~~---------~~~m~~ 146 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG---TTSP---------LGVMMT 146 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC---CCCC---------cchhhH
Confidence 36677788899999999999999999999995 9999999999999999996655421 0100 124578
Q ss_pred HHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 044175 127 FYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVT 184 (537)
Q Consensus 127 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 184 (537)
+...|+++|+|.|+-+|...+..+|...++. |+...+.......+|...|.+
T Consensus 147 L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~i 198 (538)
T KOG0252|consen 147 LCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGI 198 (538)
T ss_pred HHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccH
Confidence 8899999999999999999999999877666 666665544444444444433
No 110
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.55 E-value=1.5e-12 Score=125.08 Aligned_cols=159 Identities=12% Similarity=-0.023 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.........++-.........+.+-++...|.+..+...+......+..+++...|.++|++ ||||...+..+...+..
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~ 157 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFG 157 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHH
Confidence 34455555666666666666677777888999999999999999999999999999999995 99999988877766666
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
.+-..++ ++..+++.|.+.|+|.|+ .|...++-.|..|... |....-.. ....
T Consensus 158 ~is~~sp-------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~wa 210 (528)
T KOG0253|consen 158 VISGASP-------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWA 210 (528)
T ss_pred HhhcCCC-------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHH
Confidence 6555543 678899999999999999 8999999999988655 44433332 3345
Q ss_pred HHHHHHHHHHhhhcccccchHHHHHHH
Q 044175 177 LAAVIGVTAIVYVSTEKAWWGGFLISS 203 (537)
Q Consensus 177 ~g~~i~~~~~~~l~~~~g~~~~f~i~~ 203 (537)
+|.++.-.++-.+....|||+......
T Consensus 211 ig~v~ea~law~vm~~~gwr~~l~~~~ 237 (528)
T KOG0253|consen 211 IGQVFEALLAWGVMSNFGWRYLLFTSS 237 (528)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 666666555544556679998655444
No 111
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.54 E-value=2.5e-12 Score=133.73 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=125.6
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCc
Q 044175 43 KNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGG 122 (537)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (537)
+++++....+.+.+.++|.+++.++.+++|.|.||+ .-.+.+....+.+.+-.++.... .
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------~ 132 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------H 132 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------h
Confidence 467889999999999999999999999999999995 97777777666666555554443 2
Q ss_pred hhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh------cccccch
Q 044175 123 IAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV------STEKAWW 196 (537)
Q Consensus 123 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l------~~~~g~~ 196 (537)
+.+.+++.|++.|+.++..+|....+++.++.+++ |+..+++++.+..+|.++|.+++..+ ....|||
T Consensus 133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~ 206 (495)
T KOG2533|consen 133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR 206 (495)
T ss_pred hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce
Confidence 78899999999999999999999999999999888 99999999999999999999988775 3457999
Q ss_pred HHHHHHHHHHHHHHHHHHhccc
Q 044175 197 GGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 197 ~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
+.|++.+++.++..++.++..|
T Consensus 207 ~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 207 WLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred eehhHHHHHHHHHHheEEEEec
Confidence 9999988877666555544433
No 112
>PRK11462 putative transporter; Provisional
Probab=99.53 E-value=2.2e-11 Score=127.90 Aligned_cols=149 Identities=11% Similarity=0.066 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhh---ccchhHHHH-HHHHHHHHHHH
Q 044175 22 VLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDT---FLSRFATCL-IFGTLEVLALV 97 (537)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~---~~Gr~~~~~-~~~~~~~i~~~ 97 (537)
...+..++.+..+..++..|+++.+|+++..+|.+..+.-+.-.+.-|+.|+++|| .+||||..+ ++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 44555666666677889999999999999999999999999999999999999997 259877665 45677777776
Q ss_pred HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH
Q 044175 98 MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL 177 (537)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (537)
++...+ .+.. .....++.+.-++..++.........++.+|..++.+ +|.+..++.....++
T Consensus 96 llf~~p---~~s~----------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~~~~i 157 (460)
T PRK11462 96 LAYSTP---DLSM----------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFVLATA 157 (460)
T ss_pred HHHhCC---CCCc----------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHHHHHH
Confidence 665432 1110 1234556666667788888888888899999877432 288888888888888
Q ss_pred HHHHHHHHHhh
Q 044175 178 AAVIGVTAIVY 188 (537)
Q Consensus 178 g~~i~~~~~~~ 188 (537)
|..+++.+...
T Consensus 158 G~~~~~~~~~p 168 (460)
T PRK11462 158 GGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHHH
Confidence 87777665433
No 113
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.52 E-value=7.5e-13 Score=140.44 Aligned_cols=179 Identities=15% Similarity=0.137 Sum_probs=131.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+++.........++..+.+|++..+++.|+++.+|++..+.+.......++..++.+++|+++||+ |||+++..+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344444444455667788999999999999988999988888888888889999999999999995 9999998887655
Q ss_pred HHHHHHHH-HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 93 VLALVMIT-VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 93 ~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.++...+. ... ..+...+++++++.+++.+...+....++.|.+|++. |+++++..
T Consensus 327 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~ 383 (490)
T PRK10642 327 FVLAIPAFILIN-----------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAA 383 (490)
T ss_pred HHHHHHHHHHHh-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHH
Confidence 54433322 221 1245667788888888777777777888889999888 89999986
Q ss_pred HHHHHHHHHHHHHHHhhhcccc-cchHHHHHHHHHHHHHHHHHHh
Q 044175 172 LLTTTLAAVIGVTAIVYVSTEK-AWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~~l~~~~-g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
+....+++.++|.+.+++.+.. +|+.++++..+..++.++..++
T Consensus 384 ~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 384 FNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 6556677788999999887654 4666655544444444444433
No 114
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.45 E-value=3.2e-12 Score=131.68 Aligned_cols=176 Identities=15% Similarity=0.100 Sum_probs=132.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+++..+..+.........++....+.+.|+++++|+++.+.+.+.+...+...++.+++|+++||+ |||+.+..+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 444444444444444455555667888999999999999999988887788888999999999995 9999888776655
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.+....+... ++...+++.+++.+++.|...+..+.+..|.+|+ + ++++.+.+.
T Consensus 293 ~~~~~~~~~~-------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~ 346 (393)
T PRK15011 293 VCFYAGMLMA-------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYT 346 (393)
T ss_pred HHHHHHHHHH-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHH
Confidence 5544333333 2455666778877777777666677778888874 4 678888887
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
...++|..++|.++|++.+..||+..|.+..+..+++++..+.
T Consensus 347 ~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 347 NTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999999999999889999998877766666655544
No 115
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=3.6e-12 Score=134.42 Aligned_cols=175 Identities=14% Similarity=0.075 Sum_probs=131.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+|.+.+..++....+++...+++.|+++++|++..++++......++..++.+++|+++||+ |||+.+.....+..++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHH
Confidence 567777888888888888889999999999999999999999999999999999999999995 9998877665444443
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..+..... ..+.....+.+++.|+..............|.+|++. ++++.+......
T Consensus 338 ~~~~~~~~-----------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~g 394 (467)
T PRK09556 338 FTLGVYQH-----------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTFA 394 (467)
T ss_pred HHHHHHHh-----------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHHH
Confidence 32222221 1234455566777775443333333356679999877 899999998888
Q ss_pred HH-HHHHHHHHHhhhcc------------cccchHHHHHHHHHHHHHHHHHH
Q 044175 176 TL-AAVIGVTAIVYVST------------EKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 176 ~~-g~~i~~~~~~~l~~------------~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
++ |+.++|.+.|++.+ ..+|+..|.+..+..+++.+..+
T Consensus 395 ~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 395 YLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 86 77999999999988 56899999877666555544433
No 116
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.9e-12 Score=126.31 Aligned_cols=177 Identities=16% Similarity=0.171 Sum_probs=142.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhcc-chhHHHHHH-HHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFL-SRFATCLIF-GTLE 92 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-Gr~~~~~~~-~~~~ 92 (537)
|.+|.+.+..++-....|++..+.|.|+.+..|++..++++..+.|..+...+++++||+|||.+ |||...-+. +++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999987 777655444 3344
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+....++ .++..+..+..+.+|+-..+..-.+.....|..|++- .+++.++..
T Consensus 332 ~~~~~~~w~~~-----------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~G 388 (448)
T COG2271 332 TASLVLYWLAP-----------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVG 388 (448)
T ss_pred HHHHHHHHcCC-----------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhh
Confidence 44444555543 2356777777788888877777777777889888776 788888887
Q ss_pred HHHHH-HHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 173 LTTTL-AAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 173 ~~~~~-g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
.+..+ |++.+....+++.+.+||...|.+-.+..+++.+++.
T Consensus 389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 77777 8888888889998989999999876666555555443
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.41 E-value=5.7e-10 Score=110.72 Aligned_cols=380 Identities=14% Similarity=0.057 Sum_probs=213.4
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc-----hhHHHHH-HHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 43 KNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS-----RFATCLI-FGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-----r~~~~~~-~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
..|++++..-.+.++....+... ..+..|+.||+. + ||.-+++ |.+++..+..++..+... +.+. ..++
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~--l~~~-~~~~ 81 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLL--LAES-GQQS 81 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHH--Hccc-cccc
Confidence 45788888888888877666654 699999999996 7 5555554 566667766666654311 1110 0000
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccc-
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAW- 195 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~- 195 (537)
+-+.........++..+.|+|.+.......++.+|..|+++ |++..++.|.+.-+|.+++..+.+.+.+.++.
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~ 155 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPE 155 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCHH
Confidence 00001122344455677899999999999999999999888 99999999999999999999999988777653
Q ss_pred hHHHHH---HHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhhhhccCCccccCC
Q 044175 196 WGGFLI---SSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINEKERVGTEERIPH 272 (537)
Q Consensus 196 ~~~f~i---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (537)
|..=.+ +.+...+.++..+-.+++.++..+.++
T Consensus 156 rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~-------------------------------------------- 191 (403)
T PF03209_consen 156 RLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE-------------------------------------------- 191 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC--------------------------------------------
Confidence 222122 222223333333322222111110000
Q ss_pred CCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhhhcchhh-heeccccCCCCCccccCC
Q 044175 273 TNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLAQLQTFS-VTQGAYMDPQLGSIKVPT 351 (537)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 351 (537)
.++.++.+ .|+....+ .+.++++..+ ++....+.. | ...+ ++-..-.+.+.+ .+
T Consensus 192 ~~~~~f~~-------------a~~~~~~~--~~a~~f~~fl--~l~t~a~~~---Q-D~iLEPygg~Vfgmsv~----eT 246 (403)
T PF03209_consen 192 RPRPPFRE-------------AWRQVWAS--PQARRFFVFL--FLGTLAFFM---Q-DVILEPYGGEVFGMSVG----ET 246 (403)
T ss_pred CCCccHHH-------------HHHHHHhC--CChhHHHHHH--HHHHHHHHh---h-HHHcCCchhHHcCCCHH----HH
Confidence 00000111 01100000 0112222111 222221111 1 1100 011111111100 11
Q ss_pred CcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHH
Q 044175 352 PSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWL 431 (537)
Q Consensus 352 ~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 431 (537)
..++.....+.++...+..+... +|. ++.+....|....++++........ ..+.+.+
T Consensus 247 T~Lta~~~~G~L~G~~~~g~~l~---~~~-------~~~~~a~~G~~~~~~~f~lii~a~~------------~~~~~~~ 304 (403)
T PF03209_consen 247 TRLTAFWGGGTLLGMLLAGFLLS---RRL-------GKKRTAALGCLLGALAFALIILAGP------------LGSPWLF 304 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---CCC-------CchHHHHHHHHHHHHHHHHHHHHHh------------cccchHH
Confidence 12333344555555555554332 221 2334445666666666655444211 1235667
Q ss_pred HHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCch
Q 044175 432 SFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNN 511 (537)
Q Consensus 432 ~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~ 511 (537)
.+..+++|++.++......+...+..+++..|+.+|.|...+.++..++..+.+.+.|.... +..+ -...+
T Consensus 305 ~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~-------~~~~--~~~~a 375 (403)
T PF03209_consen 305 RPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA-------LFGN--SPALA 375 (403)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hccC--CcchH
Confidence 77889999999999999999999999999999999999999999999999988888876543 2221 12245
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q 044175 512 ANLFYWFLAILSVLNFVLYLYA 533 (537)
Q Consensus 512 ~~~~f~~~~~l~~~~~v~~~~~ 533 (537)
|...|.+=+.+.++++++...+
T Consensus 376 Y~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 376 YGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 6667766666666665554433
No 118
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.39 E-value=8.1e-12 Score=128.95 Aligned_cols=167 Identities=16% Similarity=0.127 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 044175 24 SSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQA 103 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~ 103 (537)
..+..+++.....+++.|+.+ .|+ .+.+.....+.++..++.++.|+++||+ ||||.+..+..+..++.+++....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~ 300 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 344456666677788888764 465 3445666778888889999999999995 999999998888888777666542
Q ss_pred hccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 044175 104 YSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGV 183 (537)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~ 183 (537)
+...+++.+++.|++.+...+.......|..|+++ |++..+.++...++|..+++
T Consensus 301 -------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~~ 355 (399)
T PRK05122 301 -------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGITG 355 (399)
T ss_pred -------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 45566778889999999888888888888888666 89999999989999999999
Q ss_pred HHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccc
Q 044175 184 TAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPF 219 (537)
Q Consensus 184 ~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~ 219 (537)
.+.|++.+..||+..|.+.+...+++++..+..+++
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 356 PLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999988899999988777766666555554443
No 119
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.38 E-value=1.4e-09 Score=110.92 Aligned_cols=361 Identities=14% Similarity=0.097 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhHH-HHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFAT-CLIFGTLEVLA 95 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~~-~~~~~~~~~i~ 95 (537)
-....+..++.+-.+..++..|+++.+|+++..+|.+..+.-+.-++.-|+.|.+.||. +||+|- ++++.+..++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 34445566666677788899999999999999999999999999999999999999983 587665 45556778888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++..++. ... .......++...+.+++...+.....++.+|+.++.+ +|.+..++.....
T Consensus 97 ~~l~F~~p~---~~~----------~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~R~~~~ 158 (467)
T COG2211 97 AVLLFITPD---FSM----------TGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSWRMVFA 158 (467)
T ss_pred HHHHHcCCC---ccc----------CcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHHHHHHH
Confidence 888877641 110 2345666677788999999988888999999876432 2888888888888
Q ss_pred HHHHHHHHHHHhhhc----c---cccchHHHHHHHHHHHHHHHHHHhc-cccccccCCCCCchhhHHHHHHHHHHhccCC
Q 044175 176 TLAAVIGVTAIVYVS----T---EKAWWGGFLISSIVTFIGFIALVIG-KPFYRNQQPGESPLVRVSQVVVVAIKNRKLS 247 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~----~---~~g~~~~f~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 247 (537)
++|..+...+.+.+. + ..||+..-.+..++..+..+..++. +|+..+..+.++.
T Consensus 159 ~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~------------------ 220 (467)
T COG2211 159 SLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTG------------------ 220 (467)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccc------------------
Confidence 888665554443332 2 2355554444333333333222222 2221111111000
Q ss_pred CCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHHhhh
Q 044175 248 LPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNTCLA 327 (537)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 327 (537)
...++.|.-.. .-..|.+. .+....++.+...+
T Consensus 221 --------------------------~~~~~~~~~~~------------------~~~Nrp~~---~~l~~~l~~~~~~~ 253 (467)
T COG2211 221 --------------------------VKLKLKDSFLL------------------IFKNRPLL---LLLLMNLLLFIAFN 253 (467)
T ss_pred --------------------------ccccHHHHHHH------------------HHccchHH---HHHHHHHHHHHHHH
Confidence 00000000000 00011111 11112222233333
Q ss_pred hcchhhheecc-ccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 044175 328 QLQTFSVTQGA-YMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTI 406 (537)
Q Consensus 328 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~ 406 (537)
...+...++.. .++.. ...+...........++..++..++. +|+ ++.+....+.++.+++...
T Consensus 254 i~~s~~~yy~~y~lg~~----~l~~~~~~~~~~~~~l~~~~~~p~L~----~~~-------gkk~~~~~~~~~~~i~~~~ 318 (467)
T COG2211 254 IRGSIMVYYVTYVLGDP----ELFAYLLLLASGAGLLIGLILWPRLV----KKF-------GKKKLFLIGLLLLAVGYLL 318 (467)
T ss_pred HHhhhhheeEEEEcCCh----HHHHHHHHHHHHHHHHHHHHhHHHHH----HHh-------chHHHHHHHHHHHHHHHHH
Confidence 23332222221 11111 11111111112222222233333332 332 3345566677777777665
Q ss_pred HHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhcc-------CcchhHHHHHHHHHHHHHHHHH
Q 044175 407 AGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEA-------PAGMRTLSTSFTFLSLSFGNFL 479 (537)
Q Consensus 407 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~-------P~~~rg~~~g~~~~~~~~g~~~ 479 (537)
.-+.. +.+...++...++.++|.+...+..|+++.|.. -++..|...|...+..=+|..+
T Consensus 319 ~~f~~-------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 319 LYFTP-------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHhhc-------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 55531 124455556668888899999999998888754 4566788899999999999999
Q ss_pred HHHHHHHhhhhh
Q 044175 480 SSVFVDIINAVT 491 (537)
Q Consensus 480 ~~~l~~~i~~~~ 491 (537)
+..+.+.+....
T Consensus 386 a~~~~g~~L~~~ 397 (467)
T COG2211 386 AGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHc
Confidence 998888776443
No 120
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.38 E-value=1.9e-11 Score=123.01 Aligned_cols=173 Identities=21% Similarity=0.226 Sum_probs=151.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhH-HHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFA-TCLIFGTLEV 93 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~-~~~~~~~~~~ 93 (537)
|.++...+..++....+.....+.+.++++.+|.+..+.+.+.....++..++.++.|+++||+ |||+ .+..+..+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA 253 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 4556666777778888888888899999888899999999999999999999999999999995 9999 9999999999
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++.+...... +.....+..++.|++.+...+....++.|..|+++ |++.++....
T Consensus 254 i~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 308 (352)
T cd06174 254 LGLLLLALAP-------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNT 308 (352)
T ss_pred HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHH
Confidence 8888777653 46677888999999999999999999999999766 8999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
..++|..++|.+.+++.+..+|+..|.+..+..++..+..
T Consensus 309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999988899999988887766665544
No 121
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.37 E-value=1.7e-11 Score=124.89 Aligned_cols=169 Identities=13% Similarity=0.069 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
..+.+....++..+.........+.|. +++|.++.+.+.+.+.+.+...++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 283 (377)
T TIGR00890 206 QFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVG 283 (377)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHH
Confidence 344455555555555555556666675 56899998999999999999999999999999995 9999999998888888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++..... .....+++..++.+++.|...+..+.+..|.+|+++ |++.+++.+...
T Consensus 284 ~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 340 (377)
T TIGR00890 284 MAAMLFIPM-----------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAK 340 (377)
T ss_pred HHHHHHccc-----------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHH
Confidence 777665431 122334456677888888888888899999999877 899999999999
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
++|..++|.+.+++.+..||+..|.+.+++.+++
T Consensus 341 ~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 9999999999999999899999998877655443
No 122
>PRK09952 shikimate transporter; Provisional
Probab=99.37 E-value=2.6e-11 Score=126.73 Aligned_cols=181 Identities=12% Similarity=-0.020 Sum_probs=129.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+++.........++..+++|...++.+.|+++.+|++......+.........++.++.|+++||+ ||||++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 344444445567777888999999999999999999887766666666777788899999999995 9999999887765
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+.+...... .+....+++..++.+++.+...+...++.+|.+|.+. |+++.++.+
T Consensus 327 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~ 385 (438)
T PRK09952 327 TLSAFPFFMALEA---------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHHHc---------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHH
Confidence 5554433322100 1123344455566778888888888999999999877 888888865
Q ss_pred HH-HHHHHHHHHHHHhhhcccc--cchHHHHHHHHHHHHHHHHHHh
Q 044175 173 LT-TTLAAVIGVTAIVYVSTEK--AWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 173 ~~-~~~g~~i~~~~~~~l~~~~--g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.. ..+|+.++|.+.+++.+.. +|...+.+.++..+++.+..+.
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 44 4589999999999987643 4777777666655555554443
No 123
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=1.5e-11 Score=126.78 Aligned_cols=170 Identities=12% Similarity=0.127 Sum_probs=133.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
+.++.+.+..++...+++++..+++.|+++++|++..+.+.+.+.+.++..++.+++|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3556666667777778888899999999999999999999999999999999999999999995 999998887776666
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+..+..... +.....+..++.|++.+...+...+...|..+++. ++..++...+
T Consensus 284 ~~~~~~~~~-------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~ 337 (394)
T PRK03699 284 LMYLFVNTD-------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVAS-------PKLVNFILTC 337 (394)
T ss_pred HHHHHHHcC-------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-------HHHHHHHHHh
Confidence 554444331 34445556677888888788888877888766433 4456677777
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
.++|..++|.+.|++.+..|++..|++..++..++.+
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 8899999999999999988999988876665554433
No 124
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.7e-12 Score=119.02 Aligned_cols=374 Identities=12% Similarity=0.122 Sum_probs=212.7
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
.-+..+.+.+.+++.++..++.+.|...+.+.+.++|++.||.+|-|..-++-+....+|-+..+....
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi----------- 132 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGI----------- 132 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchH-----------
Confidence 446677888888888899999999999999999999999999889776666666666677766554321
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
.+.++....+|++.|+|.-......+.+...+|..++ ..-.+++.....-+|...-..+.+++.+..+-
T Consensus 133 -----~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~~~~ 201 (459)
T KOG4686|consen 133 -----SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYDTMGR 201 (459)
T ss_pred -----HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHHHHHH
Confidence 1478999999999999988888888999999999888 88899998877778877666666666554331
Q ss_pred hHHHHHHHHHHHHHHHHHHhccccccccCCCCCchhhHHHHHHHHHHhccCCCCCChhhhhhhhhhhccCCccccCCCCc
Q 044175 196 WGGFLISSIVTFIGFIALVIGKPFYRNQQPGESPLVRVSQVVVVAIKNRKLSLPENPEELYEINEKERVGTEERIPHTNQ 275 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (537)
-.+ ...-..+++.+.+-.+. . ..+..-.+...+..++. .+.+..++ -...|+
T Consensus 202 ~~~---~~ghT~LG~~l~~~~~t---c-------~~slical~lg~~D~rA-----erilh~e~----------g~~Ge~ 253 (459)
T KOG4686|consen 202 MFP---GVGHTLLGLWLCFEVKT---C-------KQSLICALSLGLSDDRA-----ERILHLEE----------GFLGEE 253 (459)
T ss_pred hcc---cchHHHHHHHHHHHHHH---H-------HHHHHHHHHhhhhhhHH-----HHHHhhhc----------CcccCC
Confidence 100 00001111111000000 0 00000000000000000 00000000 000011
Q ss_pred hhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHh-HHHHHHHHHHHHHhhhhcc---hhhheeccccCCCCCccccCC
Q 044175 276 FRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTR-MMPILASTILMNTCLAQLQ---TFSVTQGAYMDPQLGSIKVPT 351 (537)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 351 (537)
.+. ++++.... ...+....+++++....+. ..+..... +.++
T Consensus 254 pkL-------------------------tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf---------GlS~ 299 (459)
T KOG4686|consen 254 PKL-------------------------TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF---------GLSA 299 (459)
T ss_pred ccc-------------------------ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh---------CCCh
Confidence 111 11111100 1111122333333322222 22221111 2222
Q ss_pred Ccccccch---HhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchH
Q 044175 352 PSIPVIPL---LFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISL 428 (537)
Q Consensus 352 ~~~~~~~~---~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 428 (537)
..-+++++ .......|+...++|+.+++. +.+..+.+....+.....+.. .+.
T Consensus 300 ~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~----------~wv~~a~~~tl~~H~~l~Ft~--------------lsP 355 (459)
T KOG4686|consen 300 VSAGNILSTVYGISAVLSPVFGAISDKYGFNL----------WWVASACILTLLGHSGLFFTF--------------LSP 355 (459)
T ss_pred hhccchhhhhhhhhhhhhhhHHHhHhhhccee----------hhHHHHHHHHHHHhhhHHhhh--------------ccH
Confidence 22223333 333445577777666655542 334444444444444443321 122
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCC
Q 044175 429 FWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDIN 508 (537)
Q Consensus 429 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~ 508 (537)
...+.++|++.-+.....|..+....|++.-|++.|..+..+++|-.+.+.+.+.+.+-. +++
T Consensus 356 ---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~-------g~y------- 418 (459)
T KOG4686|consen 356 ---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGD-------GSY------- 418 (459)
T ss_pred ---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCC-------Cch-------
Confidence 235677788877777788999999999999999999999999999999999988776322 111
Q ss_pred CchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 509 KNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 509 ~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.+.+.+|...+.+++.+..+.+.+-|
T Consensus 419 -~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 419 -DNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhheec
Confidence 23456777777777777666655544
No 125
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=1.4e-11 Score=134.57 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHH
Q 044175 55 NTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLY 134 (537)
Q Consensus 55 ~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 134 (537)
....+..++..++.+++|+++||+ |||+++.++.++.+++.+++++.. +...+++.+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~-------------------s~~~ll~~~~l~ 658 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN-------------------SESAMIALLCLF 658 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc-------------------cHHHHHHHHHHH
Confidence 334456688899999999999995 999999999999999888877763 344566677788
Q ss_pred HHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 135 ALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 135 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
++..++..+...++++|++|++. |++++++.+....+|++++|++++.+... +...+|++.+++.+++.++.+
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 88878888889999999999877 99999999999999999999999887654 456677776666555555444
Q ss_pred h
Q 044175 215 I 215 (537)
Q Consensus 215 ~ 215 (537)
+
T Consensus 732 ~ 732 (742)
T TIGR01299 732 K 732 (742)
T ss_pred h
Confidence 3
No 126
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.35 E-value=2.7e-11 Score=123.67 Aligned_cols=171 Identities=13% Similarity=0.085 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.+.+....++....+......++.|+++++|.++.+.+.+.........++.+++|+++||+ |||+++.++.+...+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 33333444444444455556778899889999999999888887777888899999999995 99999988876655554
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
....... +.+.+.+.+++.|++.|...+....+..|..|+ + ++++++..+...+
T Consensus 280 ~~~~~~~-------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 280 TGLAADN-------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGR 333 (375)
T ss_pred HHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHH
Confidence 4444332 455666778888888888888888888888764 3 4588888888889
Q ss_pred HHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 177 LAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 177 ~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
+|..++|.++|++.+..||+..|++.++..+++.+...
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999998888999999887777666655543
No 127
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.34 E-value=1.2e-11 Score=126.75 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=131.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
+++.++......++....++....+++.|+++++|.+..+.+.+.....+...++.+++|+++||+ |||+.+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~ 295 (394)
T TIGR00883 217 HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLA 295 (394)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence 334567777778888888888889999999889999999999999999999999999999999995 9999888665554
Q ss_pred HHHH-HHH-HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 93 VLAL-VMI-TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 93 ~i~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
.+.. .+. .... ..+...+.+..++.+++.+...+...+++.|.+|+++ |+++++.
T Consensus 296 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~ 352 (394)
T TIGR00883 296 ALLAVPLLMALLD-----------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASL 352 (394)
T ss_pred HHHHHHHHHHHhc-----------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeee
Confidence 4433 222 2221 1244556667788888888888999999999999877 7787777
Q ss_pred HH-HHHHHHHHHHHHHHhhhccccc-chHHHHHHHH
Q 044175 171 FL-LTTTLAAVIGVTAIVYVSTEKA-WWGGFLISSI 204 (537)
Q Consensus 171 ~~-~~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~ 204 (537)
.+ ....+|..++|.++|++.++.| |+..++....
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 44 4556888899999999988887 7776655443
No 128
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.34 E-value=2.1e-11 Score=126.50 Aligned_cols=177 Identities=14% Similarity=0.017 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--------hhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFN--------LAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~--------~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
+.+++..++..........+.+.|+++ .|.+ ..+.+...+...+...++.++.|+++||+ |||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence 345555555555555555777778754 4544 35668888999999999999999999995 9999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 90 TLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
++..++..++..... + ..+...+++.+++.|++.+...+....+++|.+|+++ |++.++
T Consensus 289 ~~~~v~~~l~~~~~~--~-------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g 347 (418)
T TIGR00889 289 VAWALRFGFFAYGDP--E-------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQG 347 (418)
T ss_pred HHHHHHHHHHHHcCc--c-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHH
Confidence 988888766665320 0 0124566778899999999888998999999999777 899999
Q ss_pred HHH-HHHHHHHHHHHHHHhhhccc------ccchHHHHHHHHHHHHHHHHHHhcc
Q 044175 170 YFL-LTTTLAAVIGVTAIVYVSTE------KAWWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 170 ~~~-~~~~~g~~i~~~~~~~l~~~------~g~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
+.+ ....+|..++|.++|++.+. +||+..|.+.+++.+++.++.++..
T Consensus 348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 987 56789999999999998876 4699999887766655555544443
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.33 E-value=6e-11 Score=122.24 Aligned_cols=174 Identities=9% Similarity=-0.044 Sum_probs=134.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
+..+.+.+...+..++++++..+.+.|+.+ .|.+..+++...+.+.++..++.++.|+++||+ |||+.+..+..+..+
T Consensus 205 ~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~ 282 (393)
T PRK09705 205 PRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLV 282 (393)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHH
Confidence 345666666677788888999999999975 799999999999999999999999999999995 999999998877777
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCC-CChhhhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDE-KDPKGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~ 173 (537)
+...+...+ .+.... ..++.|++.+...|.......|.+++ ++ +++.++..+.
T Consensus 283 ~~~~~~~~~------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 336 (393)
T PRK09705 283 GFCGFIWLP------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFMQG 336 (393)
T ss_pred HHHHHHHcc------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHHHH
Confidence 766554332 111222 22456788888888777777777753 33 7889999998
Q ss_pred HHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHHhc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
..+++..++|.+.|++.+..| |...|.+.+..+++..+.....
T Consensus 337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999998876 7888887776665555444443
No 130
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.31 E-value=6.9e-11 Score=125.69 Aligned_cols=149 Identities=16% Similarity=0.171 Sum_probs=114.9
Q ss_pred HHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 044175 33 ANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPD 112 (537)
Q Consensus 33 ~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 112 (537)
....+++.|+++++|++..+.+.+.+...++..++.+++|+++||+ |||+++..+..+..++.++.....
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG--------- 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence 4567889999889999999999999999999999999999999995 999999888766665554433321
Q ss_pred CCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 113 CGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 192 (537)
..+.....+..++.+.......+..++++.|.+|+++ |++.+++.+...++|..++|.++|++.+.
T Consensus 363 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 363 --------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred --------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 1233333344444433333445677788899998777 89999999988899999999999999999
Q ss_pred ccchHHHHHHHHH
Q 044175 193 KAWWGGFLISSIV 205 (537)
Q Consensus 193 ~g~~~~f~i~~~~ 205 (537)
.||+..+...+..
T Consensus 429 ~g~~~~~~~~~~~ 441 (496)
T PRK03893 429 LDLGTALASLSFS 441 (496)
T ss_pred CChHHHHHHHHHH
Confidence 9998877554433
No 131
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.31 E-value=9e-09 Score=107.65 Aligned_cols=85 Identities=13% Similarity=0.206 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCc
Q 044175 431 LSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKN 510 (537)
Q Consensus 431 l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~ 510 (537)
..+.-++.|+..+...+..-++..+..|++..+...|++.+......++||.+.+.+.+.+++
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~----------------- 445 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS----------------- 445 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----------------
Confidence 333456788888899999999999999999999999999999999999999999999876643
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhh
Q 044175 511 NANLFYWFLAILSVLNFVLYLYA 533 (537)
Q Consensus 511 ~~~~~f~~~~~l~~~~~v~~~~~ 533 (537)
..+-++...++.++++++...+
T Consensus 446 -~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 446 -QRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred -chhHHHHHHHHHHHHHHHHhhc
Confidence 1223555556666666555433
No 132
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.30 E-value=8.7e-12 Score=107.72 Aligned_cols=132 Identities=17% Similarity=0.214 Sum_probs=111.4
Q ss_pred HHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHh
Q 044175 58 TNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALG 137 (537)
Q Consensus 58 ~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 137 (537)
+.+.++..++.++.|+++||+ |||+.+..+..+..++.+++.... +...+.+.+++.|++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~ 64 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS-------------------NITVLIIARFLQGFG 64 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHH
Confidence 345677888999999999995 999999999988888887776652 567788889999999
Q ss_pred cccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 138 SGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.+...+...+++.|.+|+++ |++..+..+...++|..++|.+.+++.+..+|+..|.+......+..+..+.
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 65 AAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999877 8999999999999999999999999988889999888776665555444433
No 133
>PRK03545 putative arabinose transporter; Provisional
Probab=99.30 E-value=1.5e-10 Score=119.13 Aligned_cols=174 Identities=8% Similarity=-0.046 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
++......++....+++...+++.|+.++.|.+..+.+.+.+...++..++.++.|+++||+ |||+. ..+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHH
Confidence 34444555566666677777888898888999999999999999999999999999999995 98764 44444444444
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
.+..... .+...+++..++.|++.+...+...+.+.|..| ++ |+++++......+
T Consensus 285 ~~l~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~ 339 (390)
T PRK03545 285 LLLLPAA------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIFN 339 (390)
T ss_pred HHHHHHh------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHHH
Confidence 3332221 245666777788888888777777777777765 34 6788888888889
Q ss_pred HHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcc
Q 044175 177 LAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 177 ~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
+|..+||.++|++.+++|++..|.+.+.+.+++++......
T Consensus 340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999988877777666655443
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.29 E-value=7.9e-11 Score=121.82 Aligned_cols=168 Identities=13% Similarity=0.028 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchh---hHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHH
Q 044175 22 VLSSLENMGFIANAISMVLYFKNEMHFNLA---GASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVM 98 (537)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l 98 (537)
...++.......+.+.++.|+.+..+-... ..+.+.....++..++.+..|+++||+ |||+++..+..+..++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~ 304 (408)
T PRK09874 226 VTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIP 304 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHH
Confidence 333444445455667777787765442221 234555566777888899999999995 9999999998877777666
Q ss_pred HHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 044175 99 ITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLA 178 (537)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 178 (537)
..... +.+.+++.+++.|++.+...+...+.+.|..++++ +++.++..+...++|
T Consensus 305 ~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g 359 (408)
T PRK09874 305 MSFVQ-------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIG 359 (408)
T ss_pred HHHhc-------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHH
Confidence 55442 45667788889999999999998888888888776 889999988889999
Q ss_pred HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 179 AVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
..++|.++|++.+..||+..|++.+++.+++.+..+.
T Consensus 360 ~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 360 NVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888776666555443
No 135
>PRK12382 putative transporter; Provisional
Probab=99.28 E-value=6.6e-11 Score=121.87 Aligned_cols=162 Identities=19% Similarity=0.239 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 044175 25 SLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAY 104 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~ 104 (537)
.+...++..+..+.+.|+++ .|++. .+.....+.++..++.++.|++.||+ ||||.+..+..+..++.++.....
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~- 300 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP- 300 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc-
Confidence 34445666666777888764 46543 45566667778889999999999995 999999999888888877665542
Q ss_pred ccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Q 044175 105 SEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVT 184 (537)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 184 (537)
+....++.+++.|++.+...+...+...|.+|+++ |++.++.++...++|..++|.
T Consensus 301 ------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 301 ------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred ------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 45566778889999999888888888888888766 899999999999999999999
Q ss_pred HHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 185 AIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 185 ~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
+.+++.++.||+..|.+.+...+++.+..+.
T Consensus 357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 357 LAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998887766666555443
No 136
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.27 E-value=8.4e-11 Score=123.50 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=122.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc--hhHHH-HHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS--RFATC-LIFGTL 91 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--r~~~~-~~~~~~ 91 (537)
+.+|...+..++....+++...++|.|++++.|++..+++.....+.++..++.+++|+++|| ++ ||+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHH
Confidence 346677777777778888899999999999899999999999888899999999999999999 54 44432 222233
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
..++.+...... ..+.....+..++.|.+..........+..|.+|++. |+++.++.
T Consensus 332 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 388 (452)
T PRK11273 332 VTIATIVYWLNP-----------------AGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 388 (452)
T ss_pred HHHHHHHHHHhc-----------------ccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHH
Confidence 333333332221 0123333344444444332222233445678888877 89999998
Q ss_pred HHHHHHHHHH-HHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 172 LLTTTLAAVI-GVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 172 ~~~~~~g~~i-~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
+...++|+.+ +|.+.|++.++.||+..|.+.+..++++++...
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8878887654 799999999999999999877766655554443
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.27 E-value=1.3e-10 Score=120.14 Aligned_cols=166 Identities=11% Similarity=-0.048 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMI 99 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~ 99 (537)
+....++....++....+.+.|+++ .|++..+.+.+.....++..++.++.|+++||+ |||+.+..+.+...++....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 3344455556667777788888865 799999999999999999999999999999995 99999988766666665544
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
.... +...+.+..++.|++.+...+...++..|.+|+++ |++..++.+....+|.
T Consensus 303 ~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~ 357 (406)
T PRK11551 303 AAAP-------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLGS 357 (406)
T ss_pred HhcC-------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHHH
Confidence 4432 34445566677888877778888899999999887 8999999999999999
Q ss_pred HHHHHHHhhhccccc-chHHHHHHHHHHHHHHHH
Q 044175 180 VIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 180 ~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~ 212 (537)
.++|.++|++.+..+ |...+.+.....+++.+.
T Consensus 358 ~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 358 MAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 999999999887644 555555555444444433
No 138
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.27 E-value=9.2e-11 Score=120.89 Aligned_cols=157 Identities=13% Similarity=0.082 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMI 99 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~ 99 (537)
+.....+..........+++.|+.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 34444444555556677889999999999999999999999999999999999999995 99999988877654333322
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAA 179 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 179 (537)
.... .+...+.+..++.++..+...+..++++.|.+|+++ |++.++..+...++|.
T Consensus 322 ~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~ 377 (405)
T TIGR00891 322 FAIG------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLGG 377 (405)
T ss_pred HHhC------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHHH
Confidence 2211 234455566667777777777888899999999877 8999999998999999
Q ss_pred HHHHHHHhhhccccc-chHHHHH
Q 044175 180 VIGVTAIVYVSTEKA-WWGGFLI 201 (537)
Q Consensus 180 ~i~~~~~~~l~~~~g-~~~~f~i 201 (537)
.++|.+.|++.+..| |+..+..
T Consensus 378 ~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 378 ALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHhccccchhHHh
Confidence 999999999999888 7765543
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.26 E-value=2.2e-10 Score=117.48 Aligned_cols=160 Identities=15% Similarity=0.129 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 044175 24 SSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQA 103 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~ 103 (537)
.+...+.+.....+++.|+++ .|.++.+.+...+...+...++.++.|+++||+ |||+++..+..+..++..... .
T Consensus 209 ~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~- 284 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-
Confidence 333444455556778888865 699999999999999999999999999999995 999999988887777665432 1
Q ss_pred hccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 044175 104 YSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGV 183 (537)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~ 183 (537)
. ......+++.|++.+...|...+.+.|..|+++ ++...+....+.++|..++|
T Consensus 285 -------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 285 -------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred -------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 1 123345667777777778888888888887654 55666666677899999999
Q ss_pred HHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 184 TAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 184 ~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
.++|++.++++|++.|.+.+.+.++..+..
T Consensus 339 ~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 339 SFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999988776665554433
No 140
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.26 E-value=2.6e-10 Score=117.04 Aligned_cols=169 Identities=11% Similarity=-0.022 Sum_probs=140.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.++...+..++...+++...++.++|+++ +|.++.+.+.+.....+...+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 456667777788888888888999999965 899999999999999999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH-H
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL-L 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~ 173 (537)
..+++.... +.+.+++..++.|++.|...+....++.+. |+++ +++..+++. .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~ 336 (382)
T TIGR00902 283 RWAIIGAIE-------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNAL 336 (382)
T ss_pred HHHHHHhHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHH
Confidence 988887653 667788889999999999999999999987 7655 677777765 4
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
+..+|..++|.++|++.+++|+ ..|++.+.+.++++++
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 6679999999999999999886 4566655555544433
No 141
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.26 E-value=5.4e-11 Score=123.74 Aligned_cols=165 Identities=13% Similarity=-0.005 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhc---CCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 044175 24 SSLENMGFIANAISMVLYFKNEM---HFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMIT 100 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~ 100 (537)
..+....+......++.|+.+.+ +.+..+.+.+.+...+...++.+++|+++||+ |||+.+..+.++..++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~ 310 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSG 310 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHH
Confidence 33344444444455677765543 56667788999999999999999999999995 999999999888888887777
Q ss_pred HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH-HHHHHHHHH
Q 044175 101 VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY-FLLTTTLAA 179 (537)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~ 179 (537)
++. +...+++.+++.+++.+...+....++.|.+|++. +++..+. +....++|.
T Consensus 311 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 311 FAT-------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGA 365 (420)
T ss_pred hcc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHH
Confidence 653 56677788899998888877777888899888766 5665544 445678999
Q ss_pred HHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 180 VIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 180 ~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
.++|.+.|++.+..||+..|.+.+++.++..+..+
T Consensus 366 ~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 366 VFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999999989999999876666554444333
No 142
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.25 E-value=1.4e-10 Score=120.44 Aligned_cols=155 Identities=12% Similarity=-0.040 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCC
Q 044175 31 FIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHP 110 (537)
Q Consensus 31 ~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~ 110 (537)
.++...+.+.|+++.+|.++.+.+++.+...++..++.++.|+++||. ++++.+..+.+...++.++.....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~------- 310 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLMP------- 310 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHccc-------
Confidence 355667788899888999999999999999999999999999999994 888888888877777776665442
Q ss_pred CCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 044175 111 PDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVS 190 (537)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~ 190 (537)
+.....++.++.|++.+...+...+++.|..|++. |++.+++++...++|..++|.+.|++.
T Consensus 311 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 311 ------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 44556677788888888777777888999998766 899999999888999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHH
Q 044175 191 TEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 191 ~~~g~~~~f~i~~~~~~~~~~ 211 (537)
+.+|++..+.+.+....+..+
T Consensus 373 ~~~g~~~~~~~~~~~~~~~~~ 393 (417)
T PRK10489 373 AMMTPVASASASGFGLLIIGV 393 (417)
T ss_pred HHhchhhHHHHHHHHHHHHHH
Confidence 988988887765554443333
No 143
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.25 E-value=1.9e-10 Score=120.13 Aligned_cols=177 Identities=17% Similarity=0.102 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhcc-chhHHH-HHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFL-SRFATC-LIFGTLEV 93 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~-Gr~~~~-~~~~~~~~ 93 (537)
.++.+.+..++..+.++++..+++.|+.+++|++..+++...+.+.++..++.+++|+++||+. ++|+.. ....+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 4566666666677777788889999998889999999999999999999999999999999941 222222 22111111
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++......... .+.....+..+..|++............+|.+|+++ |++..++.+.
T Consensus 324 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 380 (434)
T PRK11663 324 LSVGSLWLMPF-----------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVGL 380 (434)
T ss_pred HHHHHHHHccc-----------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHHH
Confidence 12111111110 122222233333443322222223445678887666 8999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
..++|..++|.+.|++.+..||+..|++.+++.+++.+..+.
T Consensus 381 ~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 381 FAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877766655554443
No 144
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.24 E-value=7.8e-11 Score=123.73 Aligned_cols=170 Identities=14% Similarity=0.074 Sum_probs=133.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc-cchhHHHHHHH--HHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF-LSRFATCLIFG--TLE 92 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~Gr~~~~~~~~--~~~ 92 (537)
.++......++..++++....+++.|++ ++|++..+++.+.+...++..++.+++|+++||+ +++|+...++. +..
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 4566666677777888888889999986 4799999999999999999999999999999983 23444444433 333
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++.+++... .+.+.+++.+++.|++.+...++..+.+.|.+|+++ +++.++++.
T Consensus 321 ~l~~ll~~~~-------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 375 (455)
T TIGR00892 321 GLTHLLCALA-------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVT 375 (455)
T ss_pred HHHHHHHHHh-------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHH
Confidence 3333333333 256677788999999999999999999999998776 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccc-cchHHHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEK-AWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~-g~~~~f~i~~~~~~~~~~ 211 (537)
...++|..++|.++|++.+.. +|+..|++.+++.+++.+
T Consensus 376 ~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 376 IVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 999999999999999998876 599999887776555544
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.23 E-value=2.9e-10 Score=116.34 Aligned_cols=176 Identities=15% Similarity=0.106 Sum_probs=127.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHH-HHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATC-LIFGTLEV 93 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~-~~~~~~~~ 93 (537)
|.++...+..++....++....+.+.|+++++|.+..+.+.+.....+...++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3567777778888888888899999999999999999999999999999999999999999995 998621 11111111
Q ss_pred HHHH---HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 94 LALV---MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 94 i~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
++.+ +...... . ............+.+.+.+ ..+...++.+|.+|+++ |++.+++
T Consensus 294 ~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFATN---Y------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHhc---c------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHH
Confidence 1111 1111110 0 0122333333333344444 78889999999999877 8999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~ 213 (537)
.....++|..++|.+.+++.+..| |+..|.+.++..+++.+..
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 9988887776655554443
No 146
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.22 E-value=7.7e-10 Score=110.56 Aligned_cols=177 Identities=14% Similarity=0.076 Sum_probs=147.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
.+.++...+..++...+.|..++++.+++++.-|++..+.++++..|.++..++..++|+++|| +.|+++.....+.+
T Consensus 210 ~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a 287 (394)
T COG2814 210 RPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLA 287 (394)
T ss_pred CchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHH
Confidence 4578889999999999999999999999999999999999999999999999999999999999 78888888888888
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
+..+.+.+.. .+.....+..++.|++.+........-.++..| +. +..+.+++..
T Consensus 288 ~~~l~l~~~~------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~sl~~a 342 (394)
T COG2814 288 LALLALTFTG------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGSLNVA 342 (394)
T ss_pred HHHHHHHHhc------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHHHHHH
Confidence 8777766654 245566666666777777666666666666333 33 5778888888
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
+.|+|..+|..++|.+.+++|+....+++++..+++++..+...
T Consensus 343 a~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 343 AFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877777665543
No 147
>PRK15075 citrate-proton symporter; Provisional
Probab=99.21 E-value=3.2e-10 Score=118.44 Aligned_cols=153 Identities=14% Similarity=0.106 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHH-HH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV-MI 99 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~-l~ 99 (537)
+...++....++.+..+.+.|+++.+|++..+.++......++..++.+++|+++||+ ||||++..+..+..+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444456677888889999999988999999999888888899999999999999995 999998876554433222 11
Q ss_pred HHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH-HH
Q 044175 100 TVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT-LA 178 (537)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g 178 (537)
..... ..+.....+..++.+++.|...+...++..|.+|++. |++++++.+...+ ++
T Consensus 323 ~~~~~----------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~ 380 (434)
T PRK15075 323 SWLVA----------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIF 380 (434)
T ss_pred HHHHc----------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHH
Confidence 11110 1122333334445566666666767788999999888 8888888654444 45
Q ss_pred HHHHHHHHhhhcccccch
Q 044175 179 AVIGVTAIVYVSTEKAWW 196 (537)
Q Consensus 179 ~~i~~~~~~~l~~~~g~~ 196 (537)
+.++|.+.+++.+..|+.
T Consensus 381 g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 381 GGFTPAISTWLIHVTGDK 398 (434)
T ss_pred hhhHHHHHHHHHHhcCCc
Confidence 778999999998887753
No 148
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.21 E-value=8.1e-10 Score=114.22 Aligned_cols=176 Identities=11% Similarity=0.057 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHH-HHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCL-IFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~-~~~~~~~i 94 (537)
.++...+..++...++++..++.+.|++ ++|++..+.+.+.....++..++.++.|+++||+ |||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Confidence 4566666777888888999999998885 5899999999999999999999999999999995 9988764 33333344
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+.+.+...... . .++....++..++.|++.+...+ ..+...|..| ++ |++.+++.+..
T Consensus 301 ~~~~l~~~~~~--~------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~------~g~~~g~~~~~ 358 (402)
T TIGR00897 301 FTLALYYIPQH--F------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KH------KGAAMSVLNLS 358 (402)
T ss_pred HHHHHHHHHHc--c------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-ch------hHHHHHHHHHH
Confidence 33333222100 0 12445556677778887776644 3455666544 34 89999999999
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.++|..++|.+++++.+..||...|++.+++.+++.+...+
T Consensus 359 ~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 359 AGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999899999988877766665554443
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=8.5e-10 Score=116.89 Aligned_cols=179 Identities=16% Similarity=0.147 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHH-HHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLT-NLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+.+.+..++...+.+....+.++|+.+++|++..+.+.+.. ...++..++.+++|+++||+ ||||.+.++.++..++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344444445555666666778888988889999999999875 55679999999999999995 9999888776655555
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+........ ..+...+.+..+++.++.|...+...++..+..+++. +++.++..+...
T Consensus 303 ~l~~~~l~~~---------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~ 361 (491)
T PRK11010 303 NAGYWLLSIT---------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALS 361 (491)
T ss_pred HHHHHHHHhc---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHH
Confidence 4333221100 0133334444555555555555666777888888776 577788888888
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcc
Q 044175 176 TLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
++|..+++.++|++.+..||+..|.+..++.+++++.....+
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888999999989999999888877777666655443
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.19 E-value=8.8e-10 Score=115.19 Aligned_cols=183 Identities=16% Similarity=0.106 Sum_probs=149.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh--HHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF--ATCLIFGTL 91 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~--~~~~~~~~~ 91 (537)
.|.+...++.-++-+-+...+......|.++++|++..+...+.....+.+.++++++|++.||+ |.| ++++.++++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 35666677777888889899999999999999999999999999999999999999999999995 999 898888877
Q ss_pred HHHHHHHHHH--HhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 92 EVLALVMITV--QAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 92 ~~i~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
+.+..+...+ ...... .++.+.+++.-++.|+..|..++..-++.+|..|+++ .+..|+
T Consensus 359 ~~~i~~~g~~G~~~~~~g-------------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFg 419 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPSFFG-------------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFG 419 (477)
T ss_pred HHHHHHHHHHHhhhcccC-------------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHH
Confidence 7544433322 110000 1255667777789999999999999999999999887 799999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHHhc
Q 044175 170 YFLLTTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
++.+..-..+.+||++.+.+.+..| .|..+....++.++++++++..
T Consensus 420 ly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 420 LYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988776 8888877666666666665543
No 151
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.18 E-value=6.1e-10 Score=117.18 Aligned_cols=169 Identities=15% Similarity=-0.010 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 044175 32 IANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPP 111 (537)
Q Consensus 32 ~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 111 (537)
+.+..+.+ +..+++|++..+.+.......++..++.+++|+++||+ |||+.+.++.++..++.+++........ ++
T Consensus 301 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 376 (481)
T TIGR00879 301 NAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--TG 376 (481)
T ss_pred eehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc--CC
Confidence 33333444 44467899998888888889999999999999999995 9999999998888887776653211000 00
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 112 DCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
.+ +..+...+....+..+.......+....+..|.+|+++ |++..+......++|..++|.+.+++.+
T Consensus 377 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 377 ----SS--KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred ----cc--cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00022222222222222222334667777899999777 8999999999999999999999999988
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhc
Q 044175 192 EKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 192 ~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
+.+|+..|++.+++.+++.+..++.
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHhee
Confidence 8899988887776665555554443
No 152
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=4.9e-10 Score=110.84 Aligned_cols=184 Identities=13% Similarity=0.056 Sum_probs=145.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
-|..|.+....+...-++-+...+++.|++++++.++.+++.....+.+...+..+++|+||||+ |.+|+........+
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 45789999999999889999999999999999999999999999999999999999999999995 99999999988888
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++........+ .... ..+...++...+.+++..|.-...+..++...++++ -+...++...
T Consensus 296 ~~~~~l~~~~~--~~~~----------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vga 356 (417)
T COG2223 296 LAAALLSLFLT--GFGH----------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVGA 356 (417)
T ss_pred HHHHHHHcccc--cccc----------CcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHHH
Confidence 88877776531 0000 124555555556666667777777777777787753 4778888888
Q ss_pred HHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHHhcc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
..++|+..-|..-+...+..| +...|++...+.+++.+..+..+
T Consensus 357 ~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 357 IGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred hccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889998888888888777776 88888877776666666554443
No 153
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.17 E-value=1.1e-09 Score=114.46 Aligned_cols=169 Identities=15% Similarity=0.068 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHH-H
Q 044175 24 SSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITV-Q 102 (537)
Q Consensus 24 ~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~-~ 102 (537)
.++....+|+...+++.|+.+++|++..+.+...+.......++.++.|+++||+ |||+.+.++.++..+....... .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344778889999999999988999999999888888888889999999999995 9999888776654433322221 1
Q ss_pred hhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH-HHHH
Q 044175 103 AYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL-AAVI 181 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~i 181 (537)
.. .++....+....+...+.+...+....+.+|.+|++. |++++++.+...++ ++..
T Consensus 331 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~ 388 (432)
T PRK10406 331 QN----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGS 388 (432)
T ss_pred Hc----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhH
Confidence 10 0122221111222222333334556778899999988 99999998865553 3445
Q ss_pred HHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 182 GVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 182 ~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
+|.+.+++.....|...++..++..+++.+..++
T Consensus 389 ~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 389 AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7888886644323555565555544444444333
No 154
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.15 E-value=8.8e-10 Score=102.62 Aligned_cols=174 Identities=13% Similarity=0.126 Sum_probs=135.5
Q ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHH
Q 044175 8 IKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 87 (537)
..++.+.+++|++.++.++-..+.+-..+.-+.+.++++|+|+..++.+.+.........+|+.|.++||+ ||+-..+.
T Consensus 257 tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~ 335 (459)
T KOG4686|consen 257 TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVA 335 (459)
T ss_pred ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHH
Confidence 34455677899999988888777777777788999999999999999999999999999999999999996 99987776
Q ss_pred HHHH-HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 88 FGTL-EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 88 ~~~~-~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
+..+ ..++...+.+.. .-=+.++.+.|++..+......+.++...|+++ .++
T Consensus 336 ~a~~~tl~~H~~l~Ft~---------------------lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGT 388 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF---------------------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGT 388 (459)
T ss_pred HHHHHHHHHhhhHHhhh---------------------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcc
Confidence 6544 445555555542 112456677777777665557777888888887 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccc---chHHHHHHHHHHHHH
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVSTEKA---WWGGFLISSIVTFIG 209 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~~~g---~~~~f~i~~~~~~~~ 209 (537)
+++..+...|+|-++.|+++|.+.++-| |--.|.+....+.+.
T Consensus 389 aygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~ 434 (459)
T KOG4686|consen 389 AYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALT 434 (459)
T ss_pred hHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999987654 444566555544433
No 155
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=2.2e-08 Score=103.66 Aligned_cols=364 Identities=13% Similarity=0.069 Sum_probs=205.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH---HHHHHHhhhhcCCchhhH-HHHHHH----HHHHHHHHhhHhHHHhhhccchhHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANA---ISMVLYFKNEMHFNLAGA-SNTLTN----LMGSTFLLCLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~---~~~~~yl~~~l~~~~~~~-~~~~~~----~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 87 (537)
...-+....+...++++... .....+.....+.+..+. +..... ..+...+.+++-|.++||+ |||..+.+
T Consensus 19 ~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~ 97 (463)
T KOG2816|consen 19 SMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLL 97 (463)
T ss_pred hhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHH
Confidence 34445556666666666555 444445444444333322 222222 3577888999999999996 99999999
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHh--cccccccchhhcccCCCCCChhhhhhhh
Q 044175 88 FGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALG--SGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 88 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g--~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
....+.+..+.+.+.. +++++ +.++. .+.......++++|...+++ |.
T Consensus 98 ~~~~~~l~~~~~~~~~---------------------~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~ 147 (463)
T KOG2816|consen 98 PLFGTILPALCLLFQG---------------------YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RS 147 (463)
T ss_pred HHHHHHHhHHHHHHHH---------------------HHHhh---hcccccchhhhhhhhhhheeeccchhH------HH
Confidence 9999888888777652 23332 33333 33456777888999988877 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccccccCCCCC-chhhHHHHHHHHHHhc
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFYRNQQPGES-PLVRVSQVVVVAIKNR 244 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 244 (537)
..+++...+...+..++|..++++....|.-..|.++.+...+..+......|+...++.+++ +.++
T Consensus 148 ~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~------------ 215 (463)
T KOG2816|consen 148 SSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE------------ 215 (463)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc------------
Confidence 999999888889999999999999998999999999888877777666555444322221110 0000
Q ss_pred cCCCCCChhhhhhhhhhhccCCccccCCCCchhHhhhhccCCCCCCCCCCcccccchhHHHHHHHHhHHHHHHHHHHHHH
Q 044175 245 KLSLPENPEELYEINEKERVGTEERIPHTNQFRCLDKAAIVPKDSTEAAPWRVCTLTQVEEVKILTRMMPILASTILMNT 324 (537)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 324 (537)
..+.. ...... . +.++.... .+..|..+ .+.+. .......
T Consensus 216 --~~~~~------------------~~~~~~-----~-----------~~~~~~~~--~~~~r~~l-~l~l~-~~~~~~~ 255 (463)
T KOG2816|consen 216 --LTPGS------------------LDSSHV-----A-----------DAFQSLTK--VGPDRLLL-LLLLV-AFLSSLP 255 (463)
T ss_pred --cCCCc------------------ccchhh-----h-----------hhhhhhcc--cCCCccch-HHHHH-HHHHHHH
Confidence 00000 000000 0 00000000 00111111 11111 1111111
Q ss_pred hhhhcc-hhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHH
Q 044175 325 CLAQLQ-TFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVS 403 (537)
Q Consensus 325 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~ 403 (537)
...+.. ..+.+....+.-+ ...-+.+.........+...+. .+...+.. ...+.+..|+..-.++
T Consensus 256 ~~~~~~~~~~~yl~~~f~w~----~~~~s~~~~~~~~~~~i~~l~~----~~~l~~~l------~~~~~i~lGl~~~~~~ 321 (463)
T KOG2816|consen 256 EAGGASDVLLLYLKAKFGWN----KKEFSDLLSLVSILGIISQLLL----LPLLSSIL------GEKRLISLGLLSEFLQ 321 (463)
T ss_pred HhcCceeEEEEEEeeecCcC----HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH------hhhhHhhHHHHHHHHH
Confidence 111111 1111211111111 1111111222222222222111 11222211 2223677888888888
Q ss_pred HHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 044175 404 MTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVF 483 (537)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l 483 (537)
.++.++.. +.|.+. .............|...+++..+..++.+|+.+++......+.+.+++.+
T Consensus 322 ~~~~af~~---------------~~w~~~-~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 322 LLLFAFAT---------------ETWMMF-AAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred HHHHHHhc---------------cchhhh-HHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHH
Confidence 88888752 223223 33444445567789999999999999999999999999999999999998
Q ss_pred HHHhhhhhc
Q 044175 484 VDIINAVTK 492 (537)
Q Consensus 484 ~~~i~~~~~ 492 (537)
...+...+.
T Consensus 386 ~~~i~~~t~ 394 (463)
T KOG2816|consen 386 YGNIFALTL 394 (463)
T ss_pred HHHHHHHHH
Confidence 887765553
No 156
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.12 E-value=7.6e-09 Score=103.10 Aligned_cols=134 Identities=11% Similarity=0.018 Sum_probs=102.7
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 37 SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
.+.+|..+.+| +...+-|+..+|++.+....+.+-|+.||+ |=|.+.+++..+-.+|..+-..+.. |...
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss~-p~v~------- 135 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISSL-PFVP------- 135 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhccC-cccc-------
Confidence 44566666677 777788999999999999999999999995 9999999999999999988777642 1110
Q ss_pred CccCCchh--HHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 117 SCVKGGIA--AYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 117 ~~~~~~~~--~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
..+ ...+.+..+.+.++-.+...-+...+-+|++++ |+.+...-.++..+|.+++.++...+..
T Consensus 136 -----~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 136 -----PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred -----ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 123 367778888888777776666677777899877 8888877666666777777766666543
No 157
>PRK10504 putative transporter; Provisional
Probab=99.11 E-value=2.1e-09 Score=113.53 Aligned_cols=157 Identities=11% Similarity=-0.009 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.....++..++..+++.......+.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++..+..+..++
T Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 262 TFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALV 340 (471)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 455566667777777666666778888878999999999999888888888889999999995 9999999998888777
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..++..... ......+.+..++.|++.+...+....+..+..|+++ ++..++..+...
T Consensus 341 ~~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 398 (471)
T PRK10504 341 SLLFMLVAL----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMIM 398 (471)
T ss_pred HHHHHhccc----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHHH
Confidence 666554321 1123334455677888888888888888889888776 888999998899
Q ss_pred HHHHHHHHHHHhhhcccccc
Q 044175 176 TLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~ 195 (537)
.+|..+|+.+++.+.+..++
T Consensus 399 ~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 399 QLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHhhh
Confidence 99999999998877554443
No 158
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=1.3e-08 Score=100.99 Aligned_cols=79 Identities=11% Similarity=-0.076 Sum_probs=66.9
Q ss_pred chhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc---------
Q 044175 122 GIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE--------- 192 (537)
Q Consensus 122 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~--------- 192 (537)
.++..++++.++.|.|.+..++..++++++..++++ +++.+++...+..+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 378899999999999999999999999999998777 78889999999999999999999876621
Q ss_pred -------ccchHHHHHHHHHH
Q 044175 193 -------KAWWGGFLISSIVT 206 (537)
Q Consensus 193 -------~g~~~~f~i~~~~~ 206 (537)
..|+.+|++.+.+.
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~ 102 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGAL 102 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHH
Confidence 36888887544443
No 159
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.10 E-value=1.3e-09 Score=111.53 Aligned_cols=158 Identities=16% Similarity=0.131 Sum_probs=127.5
Q ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccch-hHHH
Q 044175 8 IKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKN-EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSR-FATC 85 (537)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr-~~~~ 85 (537)
+..+.+||++++..+..++....++...+.+-+|+++ |.+.+.+-.|+++++..++..++.+..|+-..|. |. |+-+
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pl 105 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPL 105 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCH
Confidence 4456799999999999999999988888888899875 5777888889999999999999999999999995 75 7888
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhh
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
+.|.++.++|.++.......+ .+...+++++|++.|+|.|.. +..-+++++....++ |.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~--------------~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R~ 164 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVP--------------NGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------RP 164 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcc--------------cchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------hH
Confidence 899999999999884433222 126788999999999997764 677899999877666 77
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIV 187 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~ 187 (537)
++++....+..+|..+||.+..
T Consensus 165 rA~a~~~~~~vlg~ilGp~~q~ 186 (488)
T KOG2325|consen 165 RAFAATSGGFVLGIILGPTIQL 186 (488)
T ss_pred HHHHHhhhHHHHHHHHhHHHHH
Confidence 8887766655666666665543
No 160
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.10 E-value=3.3e-09 Score=110.45 Aligned_cols=144 Identities=15% Similarity=0.006 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccC
Q 044175 30 GFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLH 109 (537)
Q Consensus 30 ~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 109 (537)
..+.+..+++.|+++ .|.++.+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..++.++.....
T Consensus 246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~------ 317 (426)
T PRK12307 246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRIP------ 317 (426)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHc------
Confidence 344466788888875 699999999999999999999999999999995 999999988877766655444332
Q ss_pred CCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 110 PPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
.+....+.+..+..+.+..+..+..+.++.|.+|++. |++++++.+...++|+.++|.+.+++
T Consensus 318 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 318 -----------QDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred -----------cccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 0122222222222223333334566778889999777 89999999888899999999999999
Q ss_pred cccccchHH
Q 044175 190 STEKAWWGG 198 (537)
Q Consensus 190 ~~~~g~~~~ 198 (537)
.+.+|+...
T Consensus 381 ~~~~g~~~~ 389 (426)
T PRK12307 381 GITMGLGAA 389 (426)
T ss_pred HHcccHHHH
Confidence 988886554
No 161
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.10 E-value=8.7e-09 Score=106.65 Aligned_cols=170 Identities=11% Similarity=-0.061 Sum_probs=125.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...+...+....++......+.|+.+++|+++.+.+.......++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 344455555555555566666778888888999999999888878888899999999999995 9999999998888888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..+........ ..+..+++++.++.|+|.+...+.......... +++ +++..+..+...
T Consensus 295 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~------~g~~~~~~~~~~ 353 (406)
T PRK15402 295 LLLAALATVIS--------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS-DVS------KGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHcc--------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-ccc------ccHHHHHHHHHH
Confidence 77766542100 124556677888899999887777666554433 344 788888888888
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKAWWGGFLISSIVTF 207 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~ 207 (537)
.+|..+|+.+++++.+..++....+..++..+
T Consensus 354 ~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~ 385 (406)
T PRK15402 354 MLIFTVGIELSKHAYLGGGNGLFNLFNLANGL 385 (406)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHH
Confidence 89999999999998877776654444444333
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.09 E-value=1.4e-09 Score=113.67 Aligned_cols=176 Identities=14% Similarity=0.058 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...+..++....++++..+.+.|+++..|++..++++....+.+...++.+++|+++||+ |+++....+.....+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 455666666777777888999999999988999999999999999999999999999999995 7554333333222221
Q ss_pred H---HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 96 L---VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 96 ~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
. ..+.... ..+.....+..++.|.+.............|.+|+++ |+++.++.+
T Consensus 331 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 387 (438)
T TIGR00712 331 TIAVIVYWMNP-----------------AGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG 387 (438)
T ss_pred HHHHHHHHhcC-----------------CCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhc
Confidence 1 1111111 0122333333444444432222222345678888777 889999988
Q ss_pred HHHHHH-HHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 173 LTTTLA-AVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 173 ~~~~~g-~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
...++| .+++|.+.|++.++.||...|.+.....+++.+..+.
T Consensus 388 ~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 388 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred hHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 777776 4689999999999889999988766655555444443
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.08 E-value=1.7e-09 Score=109.54 Aligned_cols=155 Identities=14% Similarity=0.054 Sum_probs=127.9
Q ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANA-ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
|.++......++....+++.. ...+.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345556666667777776666 6777777777999999999999999999999999999999995 99999998877777
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++..+..... ++...+.+..++.|++.+...+...+++.|..|+++ |++..+..+.
T Consensus 289 ~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 344 (365)
T TIGR00900 289 LAILVVGLTP------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhhc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 7766666542 125667778889999999999999999999999766 8999999999
Q ss_pred HHHHHHHHHHHHHhhhccccc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKA 194 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g 194 (537)
..++|..++|.++|++.+..|
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999877543
No 164
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.08 E-value=3.1e-09 Score=105.53 Aligned_cols=161 Identities=8% Similarity=-0.076 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNE--MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
..+...+..++....--++..+++.|+.+. +|+++.+.+...+.+..+..++.+++++++||+ |+||++.++.++..
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 344444444444445556778899999753 799999999999999999999999999999995 99999998888777
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++.++..... .. ....+.++.|++.+.+.|+..+...+.++++.. ++++. . .
T Consensus 220 ~~~~l~~~~~-------------------~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~asai--~-~ 271 (310)
T TIGR01272 220 LLSIGAALTH-------------------GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----QGSGI--L-C 271 (310)
T ss_pred HHHHHHHHcC-------------------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH--H-H
Confidence 7765444431 11 123355688999999999999999888875431 33333 2 4
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIV 205 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~ 205 (537)
+..+|+++.|.+.|.+.+..|.+..|++..++
T Consensus 272 ~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 272 LAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 56799999999999999988988888755543
No 165
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.07 E-value=4.5e-09 Score=111.09 Aligned_cols=173 Identities=11% Similarity=0.031 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhH-----H--HHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFA-----T--CLIF 88 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~-----~--~~~~ 88 (537)
.+|.+.+..++....++....+++.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ . ..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~ 331 (476)
T PLN00028 253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV 331 (476)
T ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence 345555554555555566777889999888999999999999999999999999999999995 8762 2 2222
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHH
Q 044175 89 GTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYF 168 (537)
Q Consensus 89 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 168 (537)
.++..+..++.... ++.....+..++.+++.+...+...++..+..| +. ++...
T Consensus 332 ~~l~~i~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 385 (476)
T PLN00028 332 QTLGGVFCIWLGRA-------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVIS 385 (476)
T ss_pred HHHHHHHHHHhccc-------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhh
Confidence 22222222222211 133444445555566555555555555566544 33 77888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhc
Q 044175 169 NYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 169 ~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
++.....++|+.++|.+.+ .....+|+..|.+.+++.+++.++.++.
T Consensus 386 g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 386 GLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 8876666777777776654 2234468899988776666665555544
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.07 E-value=6e-09 Score=106.95 Aligned_cols=168 Identities=17% Similarity=0.091 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.+...+..++...+.+....+.++|+.+.+|+++.+.+.+.+...++..++.++.|+++||+ |||+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 45555555555556666667778888888999999999999999999999999999999995 99999999988888777
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhh-cccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPAL-GAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
++..... ++.....+..++.+.|.+...+..... ..+..+++. ++... .....
T Consensus 280 ~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~ 333 (382)
T PRK10091 280 LMLFFFG------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAAG--GQIAF 333 (382)
T ss_pred HHHHHHH------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHHH--HHHHH
Confidence 6554332 123344445555556554444433333 333333222 33332 24567
Q ss_pred HHHHHHHHHHHhhhccc-ccchHHHHHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTE-KAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~-~g~~~~f~i~~~~~~~~~~ 211 (537)
++|..+||.++|++.+. .+|+..+.+.+....+.+.
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMS 370 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHH
Confidence 89999999999998875 6799988887665544433
No 167
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.06 E-value=3.1e-09 Score=110.21 Aligned_cols=163 Identities=7% Similarity=-0.088 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHH-HHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKN-EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFAT-CLIFGTLEV 93 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~-~~~~~~~~~ 93 (537)
.++...+..++....++++.+++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. +....++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45667777788888899999999999976 3577888899999999999999999999999995 97775 333333333
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++..+.... .+......+..+.++|.....+.......|.+|+++ |++++++.+.
T Consensus 322 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~~ 376 (412)
T TIGR02332 322 AGWLLASAT-------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVINA 376 (412)
T ss_pred HHHHHHHhc-------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHHH
Confidence 333222111 111222222223333333333334445566777666 8999999999
Q ss_pred HHHHHHHHHHHHHhhhccccc-chHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKA-WWGGFLISSI 204 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~ 204 (537)
..++|+.++|.+.+.+.+..| |+..|.+.++
T Consensus 377 ~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 377 TGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred hhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 999999999999999988775 9988876554
No 168
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.06 E-value=7e-09 Score=106.44 Aligned_cols=166 Identities=9% Similarity=-0.023 Sum_probs=126.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.++...+..++....+.+.....+.|++ +.|.+..+.+.+.+...+...+..++.|++.||+ |+|+.+..+.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 34555666666666777777788888985 5899999999999988889999999999999995 999999999888888
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH-H
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL-L 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~ 173 (537)
+.+++.... +.+.+++..++.|++.+...+....+..+. ++++ +++..+... .
T Consensus 283 ~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 336 (382)
T PRK11128 283 RWGLMGSTT-------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL 336 (382)
T ss_pred HHHHHHhhh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence 776665542 567778888999999998888888877775 3333 456666654 4
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
...+|..++|.++|++.+.+|+. .|+..+.+.+++
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 45678899999999999988874 555544443333
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.04 E-value=2.3e-09 Score=111.97 Aligned_cols=161 Identities=15% Similarity=0.056 Sum_probs=121.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.++.+++..++..++++......+.|.+..++ +..+.+.+.....++..++.++.|+++||+ |||+++.++.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 355666777777777777665555566655566 556677777888899999999999999995 999999999888888
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChh-hhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPK-GAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (537)
+.+++.+.. ++...+++..++.|++.+...+...++++|..+.++-+ ..+.++..++....
T Consensus 300 ~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 300 GYLIFFFAG------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred HHHHHHHcc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 877665542 24455666778889999998999999999987643211 11126888898888
Q ss_pred HHHHHHHHHHHHHhhhcccccc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
...+|..+++.+.|++.+..||
T Consensus 362 ~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 362 VRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999988766555
No 170
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.04 E-value=8.6e-09 Score=106.07 Aligned_cols=175 Identities=15% Similarity=0.092 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHH-HHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMG-STFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
.++..+...++...+......+.+.|+++ .|+++.+.+.+...... ...++.+++|++.||+ |+||.+..+.++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 34556666677777777777888889865 79999999998887754 5667789999999995 999999988776544
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCC-CChhhhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDE-KDPKGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~ 173 (537)
.......... ... ...........++.+++.|...+...+...+..++ +. +++.++..+.
T Consensus 287 ~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 347 (390)
T TIGR02718 287 LALLWFAQAA-FWL------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHH-ccc------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHH
Confidence 3332221110 000 01223333444555666677777777776666654 44 7888999888
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
..++|..++|.++|++.+..|++..|.+.+.+.+++.+
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 88999999999999999988999888877665554433
No 171
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.02 E-value=1.1e-07 Score=98.77 Aligned_cols=163 Identities=15% Similarity=0.123 Sum_probs=117.0
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc--cc--hhHHHHHHHHHHHHHHHHHHHHhhccccCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF--LS--RFATCLIFGTLEVLALVMITVQAYSEKLHPP 111 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~--~G--r~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 111 (537)
.....|+++++|+++++.....+...+. ...-++.|.++|.+ +| ||+-++++.++..++...++..+..
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~------ 82 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS------ 82 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc------
Confidence 3445688999999999988766554443 45678889999995 34 4455556666665555555544210
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 112 DCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
..+.....+..++..+|........-+.+.|...+++.+ ++...++.+....+|.+++..++|.+.+
T Consensus 83 ---------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l~~ 149 (433)
T PF03092_consen 83 ---------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPLLD 149 (433)
T ss_pred ---------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 124445556667788899999999999999988755432 6777888888899999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhccc
Q 044175 192 EKAWWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 192 ~~g~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
..+++..|.+.+.+..+..+..++..+
T Consensus 150 ~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 150 SFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred cCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 889999998887766655544444443
No 172
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.01 E-value=7.6e-09 Score=106.73 Aligned_cols=169 Identities=12% Similarity=0.023 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEM---HFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
++..+...++....+.......+.|+.+.+ +.+....+.+.+...+...++.+..|++.||+ |||+.+.++.++..
T Consensus 217 ~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~ 295 (396)
T TIGR00882 217 FWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMS 295 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHH
Confidence 444444444444555555566778877655 55666778888888888999999999999995 99999999988888
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH-HH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY-FL 172 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~ 172 (537)
++..+.... ++...+++.+++.|++..........+..+..+++. +++..+. ..
T Consensus 296 l~~~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~~ 350 (396)
T TIGR00882 296 VRIIGSSFA-------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGFQ 350 (396)
T ss_pred HHHHHHHhc-------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHHH
Confidence 877665554 255667778888888876555555556666666554 5555544 45
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
....+|..++|.++|++.+..||+..|.+.+++.++..+
T Consensus 351 ~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 351 FAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 678899999999999999988999999887766544433
No 173
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.01 E-value=1.4e-08 Score=107.45 Aligned_cols=157 Identities=8% Similarity=-0.082 Sum_probs=109.9
Q ss_pred HHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 37 SMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 37 ~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
+.+.+ .+++|.+..+..+......+...++.+++|+++||+ |||+++..+.++.+++.+++......+
T Consensus 293 ~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~---------- 360 (479)
T PRK10077 293 YAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQ---------- 360 (479)
T ss_pred HHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcC----------
Confidence 33433 456888877777777778888999999999999995 999999999999888887776542100
Q ss_pred CccCCchhHHHHHHHHHHHHhccc-ccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHh------hh
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGG-VRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIV------YV 189 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~------~l 189 (537)
........+.++.+.+.+. ..|+...+++|.+|+++ |++++++.+...++|..+++.+.+ ++
T Consensus 361 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~ 429 (479)
T PRK10077 361 -----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWL 429 (479)
T ss_pred -----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccch
Confidence 0112233344444444443 34677899999999777 899999988888888877755544 44
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHhc
Q 044175 190 STEKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 190 ~~~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
.+..+|+..|++.++..+++.+..++.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 430 VAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred hhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 467788888887766555555444433
No 174
>PRK10133 L-fucose transporter; Provisional
Probab=99.00 E-value=1e-08 Score=107.07 Aligned_cols=166 Identities=13% Similarity=0.063 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYF-KNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+...+..++.....++...+.+.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ ||||++..+.++..++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34444555666677777778888885 567899999999999999999999999999999995 9999999987776666
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..+..... +. ..+....+.|++.+.+.|+..+...|.++++. +.+.++.. ..
T Consensus 339 ~~~~~~~~-------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~l~~-~~ 390 (438)
T PRK10133 339 CLISAFAG-------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSSFIV-MT 390 (438)
T ss_pred HHHHHHcC-------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchhHHh-HH
Confidence 55444331 21 22455678999999999999999999887543 22222222 23
Q ss_pred HHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFI 211 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~ 211 (537)
.+|+.++|.+.|.+.+..| -+..|++..+..+...+
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 3678888889999988887 78888876665444433
No 175
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.99 E-value=4.4e-09 Score=111.41 Aligned_cols=155 Identities=14% Similarity=0.091 Sum_probs=126.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...+..++..+.+++...+++.|+++.+|+++.+++.......++..++.++.|++.||+ |||+.+.++..+..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 256 NFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVG 334 (485)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHH
Confidence 445556677777888888889999999999999999999999999999999999999999995 9999999998888888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..++..... + ..+...+....++.|+|.|...+.......+..|+++ ++++.+..+...
T Consensus 335 ~~~~~~~~~-~--------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 393 (485)
T TIGR00711 335 FYWRAFTFT-P--------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFTR 393 (485)
T ss_pred HHHHhccCC-C--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHHH
Confidence 777663210 0 1244556666788999999887777777777787666 899999999899
Q ss_pred HHHHHHHHHHHhhhccc
Q 044175 176 TLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~ 192 (537)
++|+.+|+.+.+.+.++
T Consensus 394 ~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 394 QLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999988877654
No 176
>TIGR00895 2A0115 benzoate transport.
Probab=98.98 E-value=7.3e-09 Score=106.31 Aligned_cols=147 Identities=15% Similarity=0.075 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
..+.+.+..++....++....+.+ ++.+++|.+..+.+...+...++..++.++.|+++||+ |||+.+....+. .+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~-~~~ 327 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLG-AVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHH-HHH
Confidence 344455556667777777777777 66678899999999999999999999999999999995 998554444333 333
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..+..... .+....++..++.|++.+...+...++++|.+|+++ |++.+++.....
T Consensus 328 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 383 (398)
T TIGR00895 328 AVLVGSTL------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGIG 383 (398)
T ss_pred HHHHHHHh------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHHH
Confidence 33322211 144556677788999999999999999999999776 899999999889
Q ss_pred HHHHHHHHHHHhhh
Q 044175 176 TLAAVIGVTAIVYV 189 (537)
Q Consensus 176 ~~g~~i~~~~~~~l 189 (537)
.+|..++|.++|++
T Consensus 384 ~~g~~~g~~~~G~l 397 (398)
T TIGR00895 384 RLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHhHHhc
Confidence 99999999999875
No 177
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.97 E-value=2.7e-08 Score=102.79 Aligned_cols=173 Identities=15% Similarity=0.177 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHH-HHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLM-GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
+.+++..++...+........+.|+.+++|+++.+.+++..... .+..++.+++|++.||+ |||+.+.++.+...+..
T Consensus 212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~ 290 (402)
T PRK11902 212 WALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSN 290 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 33334334433333323344556777789999999999886654 56889999999999995 99999888777666655
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHH----HHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASL----CLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
+........ .++.+.+.+.. +..|++.+...+....++.+.+|.++ . +...
T Consensus 291 l~~~~~~~~---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~ 345 (402)
T PRK11902 291 LGYWVLAVT---------------PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLS 345 (402)
T ss_pred HHHHHHHhc---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHH
Confidence 433321110 01333444443 34556666667777777877776433 3 3333
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhc
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
...++|..+++.++|++.+..||+..|.+.+.+.++++++.+..
T Consensus 346 ~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 346 ALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 34467776666789999999999999998887776665554433
No 178
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.97 E-value=9.2e-09 Score=109.34 Aligned_cols=153 Identities=8% Similarity=-0.016 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+....+..++..+++++...+.+.|+++.+|+++.+++.......++..++.++.|++.||+ |||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 445566667777778888888999999999999999999999999999999999999999995 9999999898888888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+++..... ..+.....+..++.|+|.|...+.....+.+..|+++ ++.+.+..+...
T Consensus 339 ~~~l~~~~~----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 396 (495)
T PRK14995 339 FYGLAMTDF----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMAY 396 (495)
T ss_pred HHHHHHhcC----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHHH
Confidence 776654321 1233445667788999999988888888888888776 788888888899
Q ss_pred HHHHHHHHHHHhhhcc
Q 044175 176 TLAAVIGVTAIVYVST 191 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~ 191 (537)
++|..+|+.+.+.+.+
T Consensus 397 ~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 397 ELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887643
No 179
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=2.7e-08 Score=102.95 Aligned_cols=186 Identities=14% Similarity=0.028 Sum_probs=125.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
+..|.+.+..++..-+|.+...++|.|+++.++ ............+...+..|++|+|+||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 357888888888777777787889999887653 33333334456788999999999999995 999999999887777
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCC---------------hh
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKD---------------PK 159 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~---------------~~ 159 (537)
+........ |.. ...+...+.+..+...++.|.-...+..++.+.+|+++ .+
T Consensus 329 ~~~~~~l~l--p~~-----------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~ 395 (462)
T PRK15034 329 FSALLFLTL--PGT-----------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQRE 395 (462)
T ss_pred HHHHHHHHh--ccc-----------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhH
Confidence 765433332 100 01255666666666667777777777777777776410 01
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc-cchHHHHHHHHHHHHHHHHHHhc
Q 044175 160 GAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK-AWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 160 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~-g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
.+++.+...++......+|+.+-|.+-+...+.. ++...|+...+..++++++-+..
T Consensus 396 ~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 396 AVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 1223566777777777888888887766655443 47777877777666666554443
No 180
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.97 E-value=2.9e-08 Score=104.72 Aligned_cols=176 Identities=11% Similarity=-0.031 Sum_probs=119.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHH--------H
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATC--------L 86 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~--------~ 86 (537)
+.++.+.+..++...+++....++|.|+++.+|.+..+.++..+...++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4577888888899999999999999999999999999999999999999999999999999995 655321 1
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 87 IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 87 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
.+......+..+...... ..+....++...+.+.+.+...+.......|..|. . ++.
T Consensus 340 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g~ 396 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYL----------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LGF 396 (465)
T ss_pred HHHHHHHHHHHHHHHHHc----------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HHH
Confidence 111111111111111110 01233334444455555555555544444555542 3 788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccc---cchHHHHHHHHHHHHHHHHHH
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVSTEK---AWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~~~---g~~~~f~i~~~~~~~~~~~~~ 214 (537)
..++.....++|+.++|.+.+++.+.. +|+..|.+.++..+++.+...
T Consensus 397 ~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 397 IKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 999999999999999999999887643 378888877766665554443
No 181
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.96 E-value=7.3e-09 Score=105.47 Aligned_cols=162 Identities=14% Similarity=0.108 Sum_probs=117.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHH--HH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGT--LE 92 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~--~~ 92 (537)
+.++.+.+..++.....++...+.+.|+++++|++..+.+.+...+.++..++.++.|+++||..+||+....... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 3456666777777777788888999999999999999999999999999999999999999984233333222111 11
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++........ ..+.....+..++.|...+...+....+..|.+|+++ |+++.++..
T Consensus 296 ~~~~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 352 (379)
T TIGR00881 296 IVSLLVYWLNP-----------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG 352 (379)
T ss_pred HHHHHHHhcCc-----------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence 11211111110 0133444555566666555556666778899999877 899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHH
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGF 199 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f 199 (537)
...++|..++|.+.|++.+.+||+..|
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999998654
No 182
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.96 E-value=4.5e-08 Score=100.20 Aligned_cols=162 Identities=12% Similarity=0.048 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.+...+...+....++......+.|+++++|.++.+.+.+.....++..++.++.|+++||+ |||+.+..+..+..++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~ 286 (385)
T TIGR00710 208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA 286 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44444445555666677777788888889999999999999999999999999999999995 99999999988888777
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
+++......+ ......+.+..++.|++.+...+.......|..| ++ +++..+.......
T Consensus 287 ~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 345 (385)
T TIGR00710 287 VLLEITAILG--------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLRL 345 (385)
T ss_pred HHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHHH
Confidence 6665542100 0133445555677889999888888888888776 34 6777777665554
Q ss_pred -HHHHHHHHHHhhhcccccchHHHHH
Q 044175 177 -LAAVIGVTAIVYVSTEKAWWGGFLI 201 (537)
Q Consensus 177 -~g~~i~~~~~~~l~~~~g~~~~f~i 201 (537)
.|+..+|.++ .+.+..+|...+..
T Consensus 346 ~~g~i~~~~~~-~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 346 VLGAIVGYLVS-LIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHH-hccccChHHHHHHH
Confidence 4555555544 55554455544443
No 183
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=2.3e-07 Score=92.18 Aligned_cols=127 Identities=13% Similarity=0.017 Sum_probs=83.5
Q ss_pred HHHHHHHHhhhhcCC---chh----hHHHHHHHHHHHHHHHhhHhHHHhhhccchhHH-HHHHHHHHHHHHHHHHHHhhc
Q 044175 34 NAISMVLYFKNEMHF---NLA----GASNTLTNLMGSTFLLCLVGGFISDTFLSRFAT-CLIFGTLEVLALVMITVQAYS 105 (537)
Q Consensus 34 ~~~~~~~yl~~~l~~---~~~----~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~-~~~~~~~~~i~~~l~~~~~~~ 105 (537)
++.++++|+++..+- ++. ..+...++..+...+..|+-|-++|.. |+||- +-...++..+.++.+..++.
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 346788888876543 333 346667778888889999999999996 85554 44555556666666776641
Q ss_pred cccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 044175 106 EKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGV 183 (537)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~ 183 (537)
.......++..++..++.........++..|..++++ .++.-+.-|-...+|+.+.-
T Consensus 112 ---------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 112 ---------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVILL 168 (438)
T ss_pred ---------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHHH
Confidence 1244555555677888888888888999999988766 33333333334455555443
No 184
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=1.1e-08 Score=101.42 Aligned_cols=173 Identities=13% Similarity=0.129 Sum_probs=139.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+...++..++-+=+-.++......|...++|++..+...+.....+.+.+++++.|+|+||+ |-|+++..+.++..+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 556666667777777777888888999999999999999999999999999999999999995 9999999999988887
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+...+.. ....+.+.-++.|...|+.++..-++.++..|+++ -++.|+++.+..
T Consensus 332 ~~~~~~~~-------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyaltg 386 (438)
T COG2270 332 ALYLIFLE-------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALTG 386 (438)
T ss_pred HHHHHHcc-------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhhh
Confidence 77655542 22344555578999999999999999999999888 688999999999
Q ss_pred HHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~ 214 (537)
..+..+||...+.+.+..| -|..+..-.++..+.+++++
T Consensus 387 ra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 387 RAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 9999999999988877654 56665544444444444433
No 185
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.96 E-value=4.8e-08 Score=100.65 Aligned_cols=164 Identities=11% Similarity=0.016 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...+..++...++++...+.++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+ .+..+..+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~ 294 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHH
Confidence 345555555566666666667765555567899999999999999999999999999999994 554 444443443333
Q ss_pred -HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 96 -LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 96 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
.++.... .+.+.+.+..++.|++.+...+..++++.+..|++ +++..+.....
T Consensus 295 ~~~l~~~~-------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 348 (394)
T PRK10213 295 ALVLTLWG-------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQVAV 348 (394)
T ss_pred HHHHHHHh-------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHHHH
Confidence 3333332 14556667788899999999998888888887743 23445555567
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTF 207 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~ 207 (537)
.++|..+||.++|++.+..|++..+...+....
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 789999999999999998898888877665443
No 186
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.96 E-value=9.5e-11 Score=124.16 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 044175 22 VLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITV 101 (537)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~ 101 (537)
+..+.. ...++.......-+.++|+++..++|++.+.+-++..+..++..++++|. -|-|-+-+|.++.++|.+++++
T Consensus 10 ~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l 87 (539)
T PF03137_consen 10 LLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL 87 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc
Confidence 333344 66666667777788899999999999999999999999999999999994 8888899999999999998875
Q ss_pred HhhccccCCCCC--------C--CCCc------------------cC---CchhHHHHHHHHHHHHhcccccccchhhcc
Q 044175 102 QAYSEKLHPPDC--------G--KSSC------------------VK---GGIAAYFYASLCLYALGSGGVRGALPALGA 150 (537)
Q Consensus 102 ~~~~~~~~~~~~--------~--~~~~------------------~~---~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 150 (537)
-.....-+..+. + .+.| ++ ..-...++++.++.|+|....++...+|+=
T Consensus 88 Phf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiD 167 (539)
T PF03137_consen 88 PHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYID 167 (539)
T ss_dssp ----------------------------------------------------------------SSS-------------
T ss_pred cHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeec
Confidence 211111000000 0 0111 01 123478888999999999999999999999
Q ss_pred cCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc---------------------c-cchHHHHHHHHHHHH
Q 044175 151 GQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE---------------------K-AWWGGFLISSIVTFI 208 (537)
Q Consensus 151 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~---------------------~-g~~~~f~i~~~~~~~ 208 (537)
|..++++ -+..++..+.+..+|.++|.++++.+... . .||..|++.+...++
T Consensus 168 Dnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l 241 (539)
T PF03137_consen 168 DNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFL 241 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 9988777 56778888888899999999888765311 1 388899888877766
Q ss_pred HHHHHHhcccccccc
Q 044175 209 GFIALVIGKPFYRNQ 223 (537)
Q Consensus 209 ~~~~~~~~~~~~~~~ 223 (537)
..+.++.++++.+..
T Consensus 242 ~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 242 SAIPLFFFPKKLPGT 256 (539)
T ss_dssp ---------------
T ss_pred HHHHHHcCCccCCCc
Confidence 666666665555443
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.95 E-value=2.1e-08 Score=106.11 Aligned_cols=171 Identities=13% Similarity=0.034 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
+..++...++..+....+...+|.+.++.+|.+....|.+.+++.++..++.++.+++.+|+ ++++.+..+.++++++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 33444445555555556667788888999999999999999999999999999999999995 99999999998888888
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
+.++++. +.+..++..++.|++.........+.+.+..|++. |+|.++.+.....
T Consensus 299 ~~lal~~-------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~ 353 (524)
T PF05977_consen 299 LLLALSP-------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFF 353 (524)
T ss_pred HHHhcch-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHH
Confidence 8877764 56677778888999988888888888888899887 9999999998889
Q ss_pred HHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 177 LAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 177 ~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
.+..+|.++.|.+.+..|-+..+.++++..++..++.
T Consensus 354 g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 354 GGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888887776555444443
No 188
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.95 E-value=1.7e-08 Score=107.46 Aligned_cols=167 Identities=12% Similarity=0.096 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHH------------HHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHH
Q 044175 23 LSSLENMGFIANAISMVLYFKNEMHFNLAGASN------------TLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGT 90 (537)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 90 (537)
..++..+.+|++..+.+.+++ +.|++..+.+. ......++..++.+++++++||+ |||+++.++..
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 334456678888888888875 57876543221 12223445566788899999995 99999999888
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 91 LEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 91 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
+..++..++...... ......+....+...++.....+....+.+|.+|.+. |+++.++
T Consensus 374 ~~~~~~~~l~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g~ 432 (502)
T TIGR00887 374 ILTVLFFVLGFAYNH---------------LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHGI 432 (502)
T ss_pred HHHHHHHHHHHHHHh---------------cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHHH
Confidence 777776655543210 0011111111112222222334566677899999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccc----------ccchHHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTE----------KAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~----------~g~~~~f~i~~~~~~~~~~~ 212 (537)
.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 433 SAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999988763 33445666555554444443
No 189
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.94 E-value=1.6e-08 Score=102.53 Aligned_cols=152 Identities=12% Similarity=0.009 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc-hhHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS-RFATCLIFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-r~~~~~~~~~~~~i 94 (537)
..+.+.+...+....+++...+++.|+++ .|++..+.+.+.+...++..++.++.|+++|| +| ||+.+..+.++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLV 275 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHH
Confidence 45556666667778888888999999975 79999999999999999999999999999999 55 66677777777777
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+.+.+.... .+... ...++.|++.|...|...+.+.+..++++ .++...++.+..
T Consensus 276 ~~~~~~~~~------------------~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~ 330 (355)
T TIGR00896 276 GLCGLLFAP------------------MHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQSI 330 (355)
T ss_pred HHHHHHHhh------------------hhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHHH
Confidence 776665542 11111 23467899999988887777766554322 157777777777
Q ss_pred HHHHHHHHHHHHhhhccccc
Q 044175 175 TTLAAVIGVTAIVYVSTEKA 194 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g 194 (537)
.++|..++|.+.|++.++.|
T Consensus 331 ~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88899999999999988765
No 190
>PRK10054 putative transporter; Provisional
Probab=98.92 E-value=1.9e-08 Score=103.69 Aligned_cols=172 Identities=15% Similarity=-0.004 Sum_probs=126.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKN--EMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
.++...+..++..+.+.......+.|+.. +.+.+....+.+............++.|++.||+ |||+.+..+.++..
T Consensus 207 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~ 285 (395)
T PRK10054 207 ALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFV 285 (395)
T ss_pred eehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHH
Confidence 44555555666666655555566666643 4456666777788777777777788999999995 99999999988888
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
++........ ++...+.++.++.++|.+...|...+++.+..|++. +++.++...
T Consensus 286 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~~- 340 (395)
T PRK10054 286 IGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQS- 340 (395)
T ss_pred HHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHHH-
Confidence 8876665432 244556677889999998888888889999988776 677776543
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
...+|..+||.++|++.++.|....|++.+....++.++.
T Consensus 341 ~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 341 LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 5568999999999999999998888876555444443333
No 191
>PRK09848 glucuronide transporter; Provisional
Probab=98.91 E-value=3e-08 Score=104.04 Aligned_cols=162 Identities=12% Similarity=0.033 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.+....+..++...+++......+.|+++.+|.+....+.......++..++.++.++++||+ |+|+++.++.++..++
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCG 307 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 455566666777777777766777788888888766555555555667788999999999995 9999999999988888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhh-hhhhhhHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKG-AKALASYFNYFLLT 174 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~ 174 (537)
.+++.+.. ..+.+.+++..++.++|.+...+...++.+|..|.++-+. .+..+..++.+..+
T Consensus 308 ~~~~~~~~-----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 308 YLLFFWVS-----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred HHHHHHcC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 77766542 1245566677888999999999999999999887543211 11247777888888
Q ss_pred HHHHHHHHHHHHhhhcccccc
Q 044175 175 TTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~ 195 (537)
..+|.++++.+.+.+.+..||
T Consensus 371 ~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 371 RKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 889999999888876544443
No 192
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.90 E-value=2.9e-08 Score=102.48 Aligned_cols=154 Identities=14% Similarity=0.083 Sum_probs=110.8
Q ss_pred HHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q 044175 33 ANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPD 112 (537)
Q Consensus 33 ~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 112 (537)
....++|.|+++..+ ++.+.+++.+........+..+.+++.||.++.++.+..+.++..++..++....
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------- 295 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------- 295 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence 344567788876655 6778888877766665555545555555434777777888877787777666553
Q ss_pred CCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 113 CGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 192 (537)
+...+.+..++.+++.+...|...+++.|..|+++ |++.++......++|..+||.++|++.+.
T Consensus 296 ----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 296 ----------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 44556666778888888888999999999999887 89999999889999999999999999776
Q ss_pred c---c-chHHHHHHHHHHHHHHHH
Q 044175 193 K---A-WWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 193 ~---g-~~~~f~i~~~~~~~~~~~ 212 (537)
. + ....|.+..+..++..+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHHHH
Confidence 3 2 345555544444444433
No 193
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.88 E-value=3.9e-08 Score=115.55 Aligned_cols=162 Identities=13% Similarity=0.019 Sum_probs=127.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh-hHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLA-GASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
.++..++..++..+..+....+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~ 311 (1146)
T PRK08633 233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence 344444555555556666778889999999999999 999999999999999999999999995 999999988888877
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+.+++.... +...+++..++.|++.++..+...+++.+..|++. |+++++..+..
T Consensus 312 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~ 366 (1146)
T PRK08633 312 SLFLLPTAP-------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFL 366 (1146)
T ss_pred HHHHHHHhh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHH
Confidence 777666553 45666777888999999998999999999999887 89999999888
Q ss_pred HHHHHHHHHHHHhhhcc-cccchHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVST-EKAWWGGFLISS 203 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~-~~g~~~~f~i~~ 203 (537)
.++|..+++.+++.+.. .+++...|.+.+
T Consensus 367 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~ 396 (1146)
T PRK08633 367 QNVGMLLFLALTTLFSGLGLSPAGLFYLIA 396 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 88998888877776543 234444554433
No 194
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.84 E-value=3.8e-08 Score=99.86 Aligned_cols=145 Identities=17% Similarity=0.145 Sum_probs=111.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHH-HHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLM-GSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
.++.+.+..++..++++....+.+.|+++ +|++..+.+.+..... +...++.+++|+++||+ ||||.+..+.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 36666667777788889999999999976 9999999998887665 57789999999999995 999999999888777
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
+..+.....+.. +. ++ -+..+...+..+.++.+++.+...+...++..|.+|+++ |++.+++.+..
T Consensus 288 ~~~~~~~~~~~~--~~-----~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~ 353 (356)
T TIGR00901 288 TNAGFVWLASNG--HH-----DG-ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSL 353 (356)
T ss_pred HHHHHHHHHhcC--cc-----cc-cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHH
Confidence 766554432100 00 00 000134566777888899999999999999999999998 89999987655
Q ss_pred HH
Q 044175 175 TT 176 (537)
Q Consensus 175 ~~ 176 (537)
.+
T Consensus 354 ~~ 355 (356)
T TIGR00901 354 SA 355 (356)
T ss_pred Hh
Confidence 44
No 195
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.83 E-value=1e-07 Score=99.43 Aligned_cols=161 Identities=14% Similarity=0.104 Sum_probs=130.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|....+++..++..++.....+..+.|.+..+|.+ ...+.+.....+...++.++.++++||+ |+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 46677888888888888877788888888888876 5677788888999999999999999995 999999999999999
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChh-hhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPK-GAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~ 173 (537)
+.+++.+.. .++.+.+++..++.|++.|...+...++++|..+.++-+ .+++.+..++.+..
T Consensus 303 ~~~~~~~~~-----------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~ 365 (428)
T PF13347_consen 303 GFLLLFFLG-----------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF 365 (428)
T ss_pred HHHHHHHHH-----------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence 998888774 136788888899999999999999999999998854322 12224667777778
Q ss_pred HHHHHHHHHHHHHhhhccccc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKA 194 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g 194 (537)
...+|..+++.+.+.+.+..|
T Consensus 366 ~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 366 FIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHhC
Confidence 888999999988887654333
No 196
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.82 E-value=2.2e-07 Score=90.36 Aligned_cols=163 Identities=12% Similarity=0.072 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
..|.+.+..-..++.||.+..++|.++. |.|+|..++|++++...+......+..-.+++|.-.+|+........+.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 5788888889999999999999999986 579999999999999999999999999999997557888888888888888
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
.+.+.+.+ .+...+ ..+++|+|.|+..|....++.+..++.+ + .++.-++.+...
T Consensus 288 ~~G~~~~P------------------~~~~~l--w~~llG~G~G~~F~laL~li~~rs~~a~--~---Aa~LSgmaQg~G 342 (395)
T COG2807 288 LVGLLLAP------------------GQLPIL--WALLLGLGQGGAFPLALTLILLRSSDAA--I---AAALSGMAQGVG 342 (395)
T ss_pred HHHHHHhh------------------hhHHHH--HHHHHhCccchHHHHHHHHHHhhcCChH--H---HHHHHHHhhhhh
Confidence 88777764 122222 2488999999999999999998876432 1 445555555556
Q ss_pred HHHHHHHHHHHhhhccccc-chHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKA-WWGGFLISSI 204 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~ 204 (537)
.+=+++||.+.|++.|..| |...+..-+.
T Consensus 343 YllAa~GP~l~G~lhDa~gsw~~~~~~l~~ 372 (395)
T COG2807 343 YLLAAFGPWLFGFLHDATGSWSAPLVLLAL 372 (395)
T ss_pred HHHHhhhhhhHhHHHHhcCChHHHHHHHHH
Confidence 6777889999999988765 7766654333
No 197
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.81 E-value=2.6e-07 Score=95.15 Aligned_cols=157 Identities=8% Similarity=-0.116 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccc
Q 044175 28 NMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEK 107 (537)
Q Consensus 28 ~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~ 107 (537)
..........++.|+++.+|.++.+.+.+.....++..++.++.+++.||+ ++++++..+.. ..+.........
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~---- 291 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH---- 291 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh----
Confidence 444455556677888889999999999999999999999999999999995 99998888753 333333333321
Q ss_pred cCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 044175 108 LHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIV 187 (537)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 187 (537)
+.+...+..++.|++.+...+...+.+.|..|++. .+++..+..+...++|..++..+.+
T Consensus 292 ---------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 292 ---------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred ---------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHHH
Confidence 44555667778899999888888888877544322 1588888888899999999998888
Q ss_pred hhcccccchHHHHHHHHHHHHHHH
Q 044175 188 YVSTEKAWWGGFLISSIVTFIGFI 211 (537)
Q Consensus 188 ~l~~~~g~~~~f~i~~~~~~~~~~ 211 (537)
.+ ...|-+..+.+.....+....
T Consensus 352 ~~-~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 352 LL-VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred HH-HHcCCCHHHHHHHHHHHHHHH
Confidence 66 456766666554444333333
No 198
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.81 E-value=7e-08 Score=113.26 Aligned_cols=183 Identities=11% Similarity=-0.103 Sum_probs=131.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
+.++...+..++..+.++++..+++.|+++.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 3566666666777777778888999999999999999999999999999999999999999985 777776666665555
Q ss_pred HHHHHHHHhhccccCCCCCCC-CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGK-SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
+.+.+.+............-- .......+.+.+.++.++.|++.+...+...+++.+.+|++. +++.++..+.
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~~ 377 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANNV 377 (1140)
T ss_pred HHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHHH
Confidence 544333320000000000000 000000244566777888999999999999999999999888 8999999998
Q ss_pred HHHHHHHHHHHHHhhhcc-cccchHHHHHHHH
Q 044175 174 TTTLAAVIGVTAIVYVST-EKAWWGGFLISSI 204 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~-~~g~~~~f~i~~~ 204 (537)
..++|..+++++.+.+.. ..++...|.+.+.
T Consensus 378 ~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 378 LNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999999999888863 3455555554333
No 199
>TIGR00898 2A0119 cation transport protein.
Probab=98.81 E-value=5.2e-08 Score=103.92 Aligned_cols=132 Identities=11% Similarity=-0.031 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHh
Q 044175 58 TNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALG 137 (537)
Q Consensus 58 ~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 137 (537)
....+....+.+++++++||+ |||+.+.++.++.+++.+++..... .......+..++.+++
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV-----------------DLYFLRTALAVLGKFG 423 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC-----------------CchHHHHHHHHHHHHH
Confidence 344566778889999999995 9999999998888888777666531 1223334444556666
Q ss_pred cccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 138 SGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 138 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
.+...+....+.+|.+|++. |++++++......+|+.++|.+.+ +. ..++..++.+.+...+++.+..++
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHHc
Confidence 66777888899999999877 899999999889999999999988 43 345556666655554444444333
No 200
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.77 E-value=4.4e-07 Score=89.00 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=104.5
Q ss_pred hhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCch
Q 044175 44 NEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGI 123 (537)
Q Consensus 44 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (537)
++.|++..|++.+.........+..++.|.++||+ ||||..+..++++.++.+..-. .+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~--------------------~~ 120 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS--------------------SN 120 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc--------------------cc
Confidence 57899999999999999999999999999999995 9999999999999988864332 36
Q ss_pred hHHHHHHHHHHHHhcccccccchhh-cccCCCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHHHHhhhcccccc--hHHH
Q 044175 124 AAYFYASLCLYALGSGGVRGALPAL-GAGQFDEKDPKGAKALASYFNYFL-LTTTLAAVIGVTAIVYVSTEKAW--WGGF 199 (537)
Q Consensus 124 ~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~l~~~~g~--~~~f 199 (537)
+..++++|++-|+++.....+--+. +.|.-...-|++ ..+.-++... ....+-++.+..++-++.+..+. ..+|
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF 198 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPF 198 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchH
Confidence 7899999999999999888877665 444422222221 1333333322 12223344444555555554443 6788
Q ss_pred HHHHHHHHHHHHHHHh
Q 044175 200 LISSIVTFIGFIALVI 215 (537)
Q Consensus 200 ~i~~~~~~~~~~~~~~ 215 (537)
..+.++..++.++...
T Consensus 199 ~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILK 214 (354)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8887776666555443
No 201
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.75 E-value=4.3e-07 Score=93.45 Aligned_cols=71 Identities=11% Similarity=0.106 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 044175 32 IANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQA 103 (537)
Q Consensus 32 ~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~ 103 (537)
.......+.|+++++|+++.+.+.+.....+...++.++.|++.||+ |||+.+.++..+..++.+.+....
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556777888999999999999999999999999999999995 999999999988888887776653
No 202
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.74 E-value=3.6e-07 Score=93.08 Aligned_cols=165 Identities=12% Similarity=-0.020 Sum_probs=110.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh---HHHHH-HHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF---ATCLI-FGT 90 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~---~~~~~-~~~ 90 (537)
|.+|.+.+..++....+|++..+++.|+++ .|++.. .+......... +.+..++++||. .|| +.... ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~---g~~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILA---GLIGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHH---HHHHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 467888889999999999999999999964 677754 45444444443 334458888884 553 33222 333
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 91 LEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 91 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
+.++......... +....++...+.+++.....+...++.+|.+|++. |+++.++
T Consensus 266 ~~a~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~ 320 (368)
T TIGR00903 266 LIAAFFLALAFEL-------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGA 320 (368)
T ss_pred HHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccch
Confidence 3333333333221 22233444455666666777778889999999888 9999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~ 212 (537)
.+...++|+..+|.+.+.+.. +.+..|.+.++..+++.+.
T Consensus 321 ~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 321 IGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI 360 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 999999999999988887663 5566666555544444443
No 203
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.74 E-value=8.7e-08 Score=100.92 Aligned_cols=176 Identities=13% Similarity=0.169 Sum_probs=146.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc--hhHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS--RFATCLIFGTLE 92 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--r~~~~~~~~~~~ 92 (537)
+.++.+.+...+..++|+.-...++.|.+ ..+++..+++.++++..+...++.++.|+++|+. . ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 46677888888888888888888888887 7899999999999999999999999999999995 7 445555556666
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.++...+++.. ++..++..-++.|++.|...+..+..+.|....++ ...++++..
T Consensus 376 gl~~~~~p~~~-------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l 430 (509)
T KOG2504|consen 376 GLARLFLPFAT-------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHH
Confidence 66666666653 66777777788999999998888888999999887 899999999
Q ss_pred HHHHHHHHHHHHHHhhhccccc-chHHHHHHHHHHHHHHHHHHhcc
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKA-WWGGFLISSIVTFIGFIALVIGK 217 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g-~~~~f~i~~~~~~~~~~~~~~~~ 217 (537)
....++.++||.++|++.+..+ |...|+.+....+++...++...
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999988877 99999988887777666555443
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.74 E-value=6.5e-08 Score=97.53 Aligned_cols=143 Identities=20% Similarity=0.197 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc-hhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFN-LAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
|.+....++..+.++....+.+.|+.+++|++ ..+.+.+.....+...++.++.|+++||+ |+|+...+......++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 287 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGA 287 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHH
Confidence 34555556666677788899999999999999 78999999999999999999999999995 99888888877777776
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTT 176 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 176 (537)
+.+..... .++..+.++..++.|++.+...+...+++.|..|+++ +++..+......+
T Consensus 288 ~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 345 (352)
T PF07690_consen 288 LGLLLLPF----------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIGS 345 (352)
T ss_dssp HHHCCSHH----------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHHH
T ss_pred HHHHHHHH----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence 66554431 1245666677888999999999999999999998877 8999999999999
Q ss_pred HHHHHHH
Q 044175 177 LAAVIGV 183 (537)
Q Consensus 177 ~g~~i~~ 183 (537)
+|..++|
T Consensus 346 ~~~~igP 352 (352)
T PF07690_consen 346 LGGIIGP 352 (352)
T ss_dssp HHHHHHH
T ss_pred HHHHHCC
Confidence 9999887
No 205
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.73 E-value=8.5e-07 Score=90.63 Aligned_cols=148 Identities=6% Similarity=-0.057 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.+...+...+...+.+....+.+.++.+++|+++.+.+.+.....++..++.+++|+++||+ |||+++.++..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 34444445555555666666677788888999999999999999999999999999999995 99999999887655543
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH-HH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL-TT 175 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~ 175 (537)
+.+...... ..+.....++..+.+.+.+...+.....+.|..| +. +++..+.... ..
T Consensus 275 ~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 332 (377)
T PRK11102 275 IWLVVSALL---------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHH---------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHH
Confidence 333222100 0133334444444555555556666666777766 44 5666666443 33
Q ss_pred HHHHHHHHHHHh
Q 044175 176 TLAAVIGVTAIV 187 (537)
Q Consensus 176 ~~g~~i~~~~~~ 187 (537)
.+|..+++.+++
T Consensus 333 ~~g~~~g~~~~~ 344 (377)
T PRK11102 333 GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHh
Confidence 466777766654
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.71 E-value=2.7e-07 Score=97.48 Aligned_cols=165 Identities=10% Similarity=-0.015 Sum_probs=115.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
|.+..+++..++...+.+......+.|.+..++ +....+.+.....++..++.++.++++||+ |||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556667777777777766666666545544444 455666666667788899999999999995 999999999887776
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCCh-hhhhhhhhHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDP-KGAKALASYFNYFLL 173 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~ 173 (537)
+.+........+ .++...+++.-++.+++.+...+...++++|..+.++- ..++..+..++....
T Consensus 309 ~~~~~~~~~~~~--------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~ 374 (473)
T PRK10429 309 SCGVLLLMGLAA--------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM 374 (473)
T ss_pred HHHHHHHHhccC--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence 665554321000 12455666677788999999999999999999774321 111224556777778
Q ss_pred HHHHHHHHHHHHHhhhcccccc
Q 044175 174 TTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
...+|..+++.+.|++.+..|+
T Consensus 375 ~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 375 VVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCC
Confidence 8889999999988887654444
No 207
>PRK11043 putative transporter; Provisional
Probab=98.70 E-value=1.5e-06 Score=89.74 Aligned_cols=151 Identities=7% Similarity=-0.025 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 044175 23 LSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQ 102 (537)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~ 102 (537)
...+....++....+.+.|++ +.|++..+.+........+..++.++++++.||+ |||+.+....+...++.+.+...
T Consensus 211 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~ 288 (401)
T PRK11043 211 IFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLA 288 (401)
T ss_pred HHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555666677777775 5799999999888888888899999999999995 99998777666655554433322
Q ss_pred hhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 044175 103 AYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIG 182 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~ 182 (537)
.... ..+.....+...+.+++.+...+...+...|..|+ + ++++.++.......++..+
T Consensus 289 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~~~~ 347 (401)
T PRK11043 289 SLLS--------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLCFLA 347 (401)
T ss_pred HHhc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHHHHH
Confidence 1100 12344455566778888888888888877777663 4 6888888877767777788
Q ss_pred HHHHhhhcccccch
Q 044175 183 VTAIVYVSTEKAWW 196 (537)
Q Consensus 183 ~~~~~~l~~~~g~~ 196 (537)
+.+.+.+.+.....
T Consensus 348 ~~~~g~l~~~~~~~ 361 (401)
T PRK11043 348 SLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHccCCChhH
Confidence 88888776643333
No 208
>PRK09669 putative symporter YagG; Provisional
Probab=98.70 E-value=1.9e-07 Score=97.87 Aligned_cols=160 Identities=12% Similarity=0.073 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
.+.+++..++...+..........|.+..++ +++..+.+.....+...++.++.++++||+ |||+.+.++.+...++.
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 4444444454444443333333333333343 233344555566777888899999999995 99999998877666544
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChh-hhhhhhhHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPK-GAKALASYFNYFLLTT 175 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~ 175 (537)
....+.. .++...+++..++.|++.+...+...++++|..+.++.+ .++..+..++.+..+.
T Consensus 309 ~~~~~~~-----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~ 371 (444)
T PRK09669 309 ALIFFIP-----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAI 371 (444)
T ss_pred HHHHHhC-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHH
Confidence 4333321 135566777778899999999999999999998744321 1122456677777888
Q ss_pred HHHHHHHHHHHhhhcccccc
Q 044175 176 TLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~ 195 (537)
.+|.++++.++|++.+..|+
T Consensus 372 klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 372 KLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999887655554
No 209
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.66 E-value=9.7e-07 Score=91.20 Aligned_cols=189 Identities=17% Similarity=0.045 Sum_probs=123.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
.++...+.+...++..+............+-++-|++..++.+.+........+.++++.++.||+ |||+.++.+..++
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLM 345 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHH
Confidence 344566666667776666544444444555567899999999999999999999999999999995 9999999999999
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCCccCCchhH-HHHHHHHHHHHhccc-ccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 93 VLALVMITVQAYSEKLHPPDCGKSSCVKGGIAA-YFYASLCLYALGSGG-VRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 93 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
.+..+++.......+.. ..-.. ..+++.++..++.+. ..|...-+.+|.+|+.. |..++++
T Consensus 346 ~~~~~~~~~~~~l~~~~-----------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~ 408 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSF-----------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSV 408 (485)
T ss_pred HHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHH
Confidence 98888776543211100 00011 123344343333332 25677788999999887 8888888
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhccccc
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPFY 220 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~ 220 (537)
......+...+-...-..+.+..|- ..|++-++.+++..+..+...|+.
T Consensus 409 ~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 409 ATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 7666656555555555555555553 455554455555555555444443
No 210
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=9.1e-07 Score=91.60 Aligned_cols=163 Identities=8% Similarity=-0.054 Sum_probs=117.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNE-MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
..+...+..++-.....++.++++.|+.+. .+.+....+...+.+.....++.+++|+++||+ ++||++.++.+...+
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 344455556665566667778889998653 255555556667777788899999999999995 999999998888887
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
..++..... +. ......++.|+..+.++|+..+...+..+++. +.....+ . +
T Consensus 312 ~~ll~~~~~-------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s~~l-~-~ 363 (410)
T TIGR00885 312 LCLGSIFAG-------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGAAGL-V-M 363 (410)
T ss_pred HHHHHHHcC-------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhHHHH-H-H
Confidence 777766642 21 23456677888889999999999999887554 2222222 2 2
Q ss_pred HHHHHHHHHHHHhhhcccc------cchHHHHHHHHHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEK------AWWGGFLISSIVTF 207 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~------g~~~~f~i~~~~~~ 207 (537)
..+|+++.|.+.|++.|.. +.+..|+++.++.+
T Consensus 364 ~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 364 AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 3499999999999999853 47788887766543
No 211
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.61 E-value=8.1e-07 Score=86.28 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=105.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc--C-----------------CchhhHHHHHHHHHHHHHHHhhHhHHHh
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEM--H-----------------FNLAGASNTLTNLMGSTFLLCLVGGFIS 75 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~G~la 75 (537)
|..+.+-.+-+.+++.||+++-......+... | .+..+-.-=+.+..+.-..+.++.+++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 45556677778899999998866554443211 1 1111112223345677788999999999
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCC
Q 044175 76 DTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDE 155 (537)
Q Consensus 76 D~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 155 (537)
|| +||||++..+.+++.+.++++...-.. .....+++.+|+++. +...+.+.|..|.+|.
T Consensus 406 er-lGRKkTMal~l~~f~iflfll~~c~~r---------------n~~tvllf~arafis----g~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 406 ER-LGRKKTMALSLILFGIFLFLLTTCKTR---------------NAYTVLLFTARAFIS----GAFQVAYVYTPEVYPT 465 (528)
T ss_pred HH-hcchhHHHHHHHHHHHHHHHHHHhcCc---------------chhHHHHHHHHHHHh----chheEEEEecCcccch
Confidence 99 599999999999999988877655210 123356677777653 4467778899999998
Q ss_pred CChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 044175 156 KDPKGAKALASYFNYFLLTTTLAAVIGVTAI 186 (537)
Q Consensus 156 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 186 (537)
.. |+.+.+....+.-+|+++.|+++
T Consensus 466 av------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 466 AV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 88 89999998888899999999998
No 212
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.60 E-value=2.6e-06 Score=87.46 Aligned_cols=173 Identities=10% Similarity=-0.018 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
+...++..++...+.-....+...|+++.-|.+....+.+.+...+.-.+.-.+.+++-.|+ |.|+++.++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44445555566666666678889999765447778888888888888889999999999995 99999999999988887
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhH----HHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAA----YFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
.+.+... ++.+ ...++..+.|+..|........++.+..|++. |+++.+++.
T Consensus 288 ~l~a~~~------------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~ 343 (400)
T PF03825_consen 288 LLYAYFS------------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYS 343 (400)
T ss_pred HHHHHhc------------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHH
Confidence 7777662 1222 22334567999999999999999999999988 899999877
Q ss_pred HH-HHHHHHHHHHHHhhhcccccch------HHHHHHHHHHHHHHHHHH
Q 044175 173 LT-TTLAAVIGVTAIVYVSTEKAWW------GGFLISSIVTFIGFIALV 214 (537)
Q Consensus 173 ~~-~~~g~~i~~~~~~~l~~~~g~~------~~f~i~~~~~~~~~~~~~ 214 (537)
.. ..+|.++|..++|++.+.+|-+ ..+.+++...++..+++.
T Consensus 344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 54 5699999999999998876644 344455544444444433
No 213
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.59 E-value=1.7e-06 Score=92.55 Aligned_cols=203 Identities=13% Similarity=0.162 Sum_probs=153.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
..+.+..+.....+....+.+.......-+.+.++++..+.|++.+.+-++..+...+..+.+-|. =|-|.+-+++++.
T Consensus 94 ~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 94 NIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLM 172 (735)
T ss_pred CcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHH
Confidence 445566666666666666667778888888999999999999999999999999999999999994 8888999999999
Q ss_pred HHHHHHHHHHhhcc------------ccCCC--------------CCC--CCCcc---CCc--hhHHHHHHHHHHHHhcc
Q 044175 93 VLALVMITVQAYSE------------KLHPP--------------DCG--KSSCV---KGG--IAAYFYASLCLYALGSG 139 (537)
Q Consensus 93 ~i~~~l~~~~~~~~------------~~~~~--------------~~~--~~~~~---~~~--~~~~~~~~~~l~g~g~g 139 (537)
++|.+++++-.... .-..| .|. .++|. +.+ -..+++++.++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 99999887521100 00000 010 12232 111 22367788899999999
Q ss_pred cccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc-----------------cc--cchHHHH
Q 044175 140 GVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST-----------------EK--AWWGGFL 200 (537)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~-----------------~~--g~~~~f~ 200 (537)
...+.-.+|+=|...+++ -...+++.+....+|.++|.++++++.. .| .||..|+
T Consensus 253 pi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred CCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 999999999999887766 5778888898999999999999987641 11 3899999
Q ss_pred HHHHHHHHHHHHHHhccccccc
Q 044175 201 ISSIVTFIGFIALVIGKPFYRN 222 (537)
Q Consensus 201 i~~~~~~~~~~~~~~~~~~~~~ 222 (537)
+.+.+.++..+.++++.+..++
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCcc
Confidence 9888888888777777665443
No 214
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.57 E-value=5.4e-07 Score=91.61 Aligned_cols=139 Identities=16% Similarity=0.075 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
..+.+.+..++....++++..+.+.|+++.+|+++.+++.+.....+...++.+++|+++||+ |||+.+..+..+...+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 345555555666666778888899999999999999999999999999999999999999995 9999888887776666
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCc-hhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGG-IAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
..++..... .+ +...+.+...+.+++.|...+...++++|..|+ + +++..+.....
T Consensus 305 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~ 361 (366)
T TIGR00886 305 AFLVVLGLV----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A------TGAVSGLVGAI 361 (366)
T ss_pred HHHHHhcCC----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h------cccHHHHHHHh
Confidence 665554321 01 344444555556666666667777778888763 3 68888877666
Q ss_pred HHHH
Q 044175 175 TTLA 178 (537)
Q Consensus 175 ~~~g 178 (537)
.++|
T Consensus 362 ~~~g 365 (366)
T TIGR00886 362 GNLG 365 (366)
T ss_pred ccCC
Confidence 6554
No 215
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.57 E-value=1.1e-06 Score=91.54 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh-----HHHHHH--
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF-----ATCLIF-- 88 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~-----~~~~~~-- 88 (537)
.+|.+.+..+++..+++....+.|.|+++.+|++..+.|++.+.-.+...+..+++|.++||. -+| .+..+.
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHHh
Confidence 689999999999999999999999999999999999999999999999999999999999995 331 111222
Q ss_pred HHHHHHH--HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 89 GTLEVLA--LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 89 ~~~~~i~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
......+ .+.+++.. .++....++...+.-...|...+-...-..|..|.+ -+.
T Consensus 338 i~~~~~ai~l~~l~~~~-----------------~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~-------a~~ 393 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTS-----------------DEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH-------AGF 393 (466)
T ss_pred HHHHHHHHHHHeeeecC-----------------CCcchHHHHHHHHHHHHcccchhhhHhhhhhccchH-------HHH
Confidence 1222222 22222221 011111122211111112222222233233434433 478
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc---ccchHHHHHHHHHHHHHHHHHHhc
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVSTE---KAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~~---~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
.++..+...++.+.++|.+.+.+..+ ..|+..|++.+++.++..+.+.+.
T Consensus 394 l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 394 VMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 88888889999999999999998843 369999999998887777655444
No 216
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.49 E-value=9.1e-06 Score=83.67 Aligned_cols=139 Identities=8% Similarity=-0.041 Sum_probs=96.5
Q ss_pred HHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 044175 35 AISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCG 114 (537)
Q Consensus 35 ~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 114 (537)
....+.|+++.+|.+..+.+++......+..++.++.+++.||+ ||+... +.....++.+.........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~-------- 295 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG-------- 295 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc--------
Confidence 44556688877999999999988888888888889999999995 743332 2222233322221111000
Q ss_pred CCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 044175 115 KSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKA 194 (537)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g 194 (537)
..+...+.++.++.++|.+...|...+...|.+|+ + +++..+......++|..+++.+++++.....
T Consensus 296 ------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 296 ------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 11345566777889999999999999999888873 3 5777777777789999999999988876544
Q ss_pred chH
Q 044175 195 WWG 197 (537)
Q Consensus 195 ~~~ 197 (537)
+..
T Consensus 363 ~~~ 365 (394)
T PRK11652 363 FSL 365 (394)
T ss_pred HHH
Confidence 443
No 217
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.48 E-value=2.4e-06 Score=90.27 Aligned_cols=184 Identities=9% Similarity=-0.003 Sum_probs=127.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhh----HHHHHHHHHHHHHHHhhHhH----HHhhhccchhHHH--
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAG----ASNTLTNLMGSTFLLCLVGG----FISDTFLSRFATC-- 85 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~G----~laD~~~Gr~~~~-- 85 (537)
.+..+++...+-...|....+.++.|.+++.+.+... .+++.+...+...+.+++-. ++.||..+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 4455666666667777777788888887665443222 56666666666666766654 4555411334433
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhh
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALA 165 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 165 (537)
.+|.++.+++...+++.....+- +...+.+++++..++.++|+....|...++++|..|++. |+
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~~~----------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g 416 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFADA----------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MG 416 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC----------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HH
Confidence 67888888887776654211000 002478889999999999999999999999999999877 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHh
Q 044175 166 SYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVI 215 (537)
Q Consensus 166 ~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~ 215 (537)
+.++.+..+..+|..+++.+........+|...|....+.+++..++.+.
T Consensus 417 ~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 417 QMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888887666667777776655555444444433
No 218
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.46 E-value=2.7e-06 Score=87.12 Aligned_cols=158 Identities=13% Similarity=0.040 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
+...+++..++...++.-..+.+..|.+..+|.+................++.++...|.+|+ |+|+++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 344455566666666655556666777777888888888888888888888899999999995 9999999999999999
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhh-hhhhHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAK-ALASYFNYFLLT 174 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~ 174 (537)
.+++.+.+ .++..++++..++.++|.+...+...++++|..+.+|-+.-+ .-+..++.+...
T Consensus 316 ~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 316 YLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred HHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 99988875 247788888999999999999999999999997754432211 123344445555
Q ss_pred HHHHHHHHHHHHhhhcc
Q 044175 175 TTLAAVIGVTAIVYVST 191 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~ 191 (537)
.-+|.+++..+.|++.+
T Consensus 379 ~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 379 RKLGLALAGFIPGWILG 395 (467)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66787777777666543
No 219
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.42 E-value=9.7e-06 Score=76.89 Aligned_cols=160 Identities=11% Similarity=0.029 Sum_probs=106.3
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
+.....+++.+|+++.|.+.+-..-.++..++ ++.|.+.|++ |.+.++.+|.+...+|..++..+.... +.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~-i~------ 92 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGR-IP------ 92 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCc-cC------
Confidence 44556788999999999999999999998875 8889999995 999999999999999998887764211 10
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAW 195 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~ 195 (537)
....+.+.+..++.+.|.+...........+.||+ + |+++.++.-....+++.+-..+...+.+.-.-
T Consensus 93 -----~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 93 -----SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred -----ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 12455666666666666666555555556678884 4 78888886666666665544444434333222
Q ss_pred hHHHHHHHHHHHHHHHHHHhc
Q 044175 196 WGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 196 ~~~f~i~~~~~~~~~~~~~~~ 216 (537)
...+.++.....+.++..++.
T Consensus 161 ~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhe
Confidence 333333333334444443433
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.39 E-value=5.9e-06 Score=83.82 Aligned_cols=170 Identities=11% Similarity=0.019 Sum_probs=132.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMH---FNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
|.+|.+.+........|+..-.-.+.|.+..++ .++...|.+.+...+.-.+.-.+..++-+| +|.|+.++++...
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHH
Confidence 466776666666666666666667778775443 344557888888999999999999999999 5999999999988
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.++=...+++++ +++.+.+.+.+.++-.+........++++.+|++- .++...+.
T Consensus 299 ~~iRi~~~~~~~-------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v~ 353 (412)
T PF01306_consen 299 MAIRIIGSGFAT-------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLVG 353 (412)
T ss_dssp HHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHHH
T ss_pred HHHHHHHHhhhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHHH
Confidence 888878888774 77889999999999999999999999999999655 45666553
Q ss_pred -HHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHH
Q 044175 172 -LLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGF 210 (537)
Q Consensus 172 -~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~ 210 (537)
..+..+|..+.+.++|++-++.|++..|++-+.+.+...
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFT 393 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHH
Confidence 356778999999999999999999988876555544333
No 221
>PRK11462 putative transporter; Provisional
Probab=98.35 E-value=1.1e-05 Score=84.89 Aligned_cols=157 Identities=10% Similarity=-0.006 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
...++...++..++..........|.+..+|. +...+.+...+.+...++.+++++++||+ |+|+++..+..+..+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~ 307 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVIS 307 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 34444444555555444444444444433443 34455667778888899999999999995 99998876655444433
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhh-hhhHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKA-LASYFNYFLLTT 175 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~ 175 (537)
++..+.+ ..+...+++..++.|++.+...+...++.+|..+.++-+...+ -+..++....+.
T Consensus 308 ~~~~~~~-----------------~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~ 370 (460)
T PRK11462 308 LAMFFVP-----------------MQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVL 370 (460)
T ss_pred HHHHHhc-----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHH
Confidence 3333322 1122334444566777777777777788888876432111111 233345555677
Q ss_pred HHHHHHHHHHHhhhccc
Q 044175 176 TLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~ 192 (537)
.+|.++++.++|++.+.
T Consensus 371 Klg~alg~~i~g~iL~~ 387 (460)
T PRK11462 371 KLGLAFGGALIGWMLAY 387 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888887766443
No 222
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.33 E-value=0.00036 Score=71.80 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHH
Q 044175 57 LTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYAL 136 (537)
Q Consensus 57 ~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 136 (537)
+.+-.....+.+++++.+-|+ +|.|..+.++...+..-....... +...++++-.+.|+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~~--------------------N~y~~yfssallG~ 114 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLFP--------------------NSYYLYFSSALLGF 114 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHhc--------------------chHHHHHHHHHhhh
Confidence 566677788899999999999 599999999987776554433332 45778889999999
Q ss_pred hcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 044175 137 GSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGV 183 (537)
Q Consensus 137 g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~ 183 (537)
|.+..+.-.-.+.+|..+++. +.+-.+..+.....+..+|.
T Consensus 115 Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 115 GAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999887666 55556555544555544443
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.31 E-value=2.1e-05 Score=78.56 Aligned_cols=174 Identities=17% Similarity=0.174 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~ 97 (537)
...++..+...++|+.--..+-+|-.+.||++..|...++..+..+..++..+.|++..|..+++++-.+++....++..
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~ 290 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFA 290 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Confidence 34555556667777766677778888889999999999999999999999999999988656999999999999999988
Q ss_pred HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH
Q 044175 98 MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL 177 (537)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (537)
+...+.. .++.+.+..+.++.|+|.|.......+..-|...+++ .+..++.+..+..+
T Consensus 291 lii~a~~----------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~ 348 (403)
T PF03209_consen 291 LIILAGP----------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAI 348 (403)
T ss_pred HHHHHHh----------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHH
Confidence 8777653 2366889999999999999998888888889887666 67889998888888
Q ss_pred HHHHHHHHHhhhcc----------cccchHHHHHHHHHHHHHHHHH
Q 044175 178 AAVIGVTAIVYVST----------EKAWWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 178 g~~i~~~~~~~l~~----------~~g~~~~f~i~~~~~~~~~~~~ 213 (537)
...++-.++|.+.| ..+|..+|.+-++..++++.+.
T Consensus 349 A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 349 ARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88888777775532 2357777877776665555544
No 224
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.28 E-value=2.3e-05 Score=67.12 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=91.1
Q ss_pred cchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHH
Q 044175 357 IPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYC 436 (537)
Q Consensus 357 ~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 436 (537)
...+..++..++..++.|+..+ .+.+..+..+.+++.+..... .+.+......+
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~-----------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 59 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGR-----------KPVLLVGLFIFVLSTAMFALS---------------SNITVLIIARF 59 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcch-----------hHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHH
Confidence 3455566666666665444322 234555655656655544432 23445556678
Q ss_pred HHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHH
Q 044175 437 IFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFY 516 (537)
Q Consensus 437 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f 516 (537)
+.+++.....+....++.|..|++.|++..++.+....++..+++.+.+.+.+. .++...|
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------------------~~~~~~~ 120 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-------------------LGWRAPF 120 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-------------------cchHHHH
Confidence 888888888899999999999999999999999999999999999888865421 2334556
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 044175 517 WFLAILSVLNFVLYLYAA 534 (537)
Q Consensus 517 ~~~~~l~~~~~v~~~~~~ 534 (537)
++.+.+.++..+..+.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 121 LFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 776766666665555443
No 225
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.28 E-value=3.7e-05 Score=79.78 Aligned_cols=167 Identities=9% Similarity=-0.025 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLA 95 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~ 95 (537)
.++...+...+....++......|.++++.+|++..+.++.......+..++..+.+.+.++. +++|.+.....+..++
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHH
Confidence 455566666667777777777888899999999999999988878888888777777766543 4545544444444445
Q ss_pred HHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH
Q 044175 96 LVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 96 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
..++....... .+.....+++.++.++|.+...|+.....-++.+ .+ ++++.+......
T Consensus 298 ~~l~~~~~~~~--------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~-~~------~G~a~a~~~~~~ 356 (413)
T PRK15403 298 LALLIVGNLLW--------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNN-LP------KGTVSASLNMVI 356 (413)
T ss_pred HHHHHHHHHHc--------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCC-CC------CcHHHHHHHHHH
Confidence 44443321000 1133345677888899999988888753322221 12 355555555555
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHHHHHH
Q 044175 176 TLAAVIGVTAIVYVSTEKAWWGGFLISSIV 205 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~ 205 (537)
..+...++.+.+++.++ +-...|.....+
T Consensus 357 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 357 LMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 66667777777877654 445555544433
No 226
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.27 E-value=2.6e-05 Score=75.98 Aligned_cols=146 Identities=17% Similarity=0.190 Sum_probs=107.4
Q ss_pred HHHHHHhhhhcCCch--hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 044175 36 ISMVLYFKNEMHFNL--AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDC 113 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 113 (537)
...+.+. .+++.+. ...++..+.+.+...++.++.|.++||+ |||+.+..+.....++.++..+...
T Consensus 23 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 91 (338)
T COG0477 23 PALPLLL-STLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------- 91 (338)
T ss_pred HHHHHHH-HHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 3344443 4445444 4788999999999999999999999996 9998888888775666555555531
Q ss_pred CCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHHHHHhhhccc
Q 044175 114 GKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL-TTTLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~i~~~~~~~l~~~ 192 (537)
.....+++.|+.+|++.|...+...+++.|.+++ . ..|+...+.... ...+|..++|.+++.+...
T Consensus 92 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 92 --------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred --------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1467888999999999999999999999999886 1 126777777666 5677888888777665543
Q ss_pred --ccchHHHHHHHHH
Q 044175 193 --KAWWGGFLISSIV 205 (537)
Q Consensus 193 --~g~~~~f~i~~~~ 205 (537)
.+|+..|.+....
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (338)
T COG0477 159 LLWGWRAAFLLAALL 173 (338)
T ss_pred HhcchHHHHHHHHHH
Confidence 5788766554443
No 227
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.26 E-value=7.6e-05 Score=76.46 Aligned_cols=110 Identities=13% Similarity=0.206 Sum_probs=80.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHH
Q 044175 388 TQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTS 467 (537)
Q Consensus 388 ~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 467 (537)
+..+.+..|+.+..+=++.++.. .++|.+++.-++.|+..+..+.+..+|+...+|+++|.++++
T Consensus 434 GHv~v~~lgLa~~~~Rf~~~S~L---------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 434 GHVNVMYLGLACNVGRFLYYSYL---------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred cccceeeehhhHHHHHHHHHHHh---------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 34455667777777777766664 356778888899999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 044175 468 FTFL-SLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYL 531 (537)
Q Consensus 468 ~~~~-~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~ 531 (537)
+... ...+|..+|..+.+.+....+ ...+|..++..+++.++++.
T Consensus 499 l~~g~f~GlG~g~GslIGG~~v~~fg-------------------~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 499 LLQGIFHGLGKGLGSLIGGFVVERFG-------------------ARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHhcccCcchhhhhhhhhheeeh-------------------hHHHHHHHHHHHHHHHHHHH
Confidence 9887 456777888877776553221 13356666666666655443
No 228
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.26 E-value=1.1e-05 Score=85.38 Aligned_cols=152 Identities=9% Similarity=-0.001 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCch----hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHH-------HHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNL----AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFAT-------CLIFG 89 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~-------~~~~~ 89 (537)
++...+....+......++.|.++..+.+. -...++.+...+...+..|+.|++.||. |||+. +.+|.
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~ 353 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGM 353 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHH
Confidence 333555566666666777788765322211 1234455555566778888899999995 99974 77888
Q ss_pred HHHHHHHHHHHHHhh-ccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHH
Q 044175 90 TLEVLALVMITVQAY-SEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYF 168 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 168 (537)
++..++.+.++.... ..... ...+.+++....+++|+|++...|....++.+..|++. ++.++
T Consensus 354 ~l~~~~~~~~~~~~~~~~~~~----------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~ 417 (489)
T PRK10207 354 FLCSLGFLTAAAAGMWFADAQ----------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFIL 417 (489)
T ss_pred HHHHHHHHHHHHHHHhhcCCC----------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHH
Confidence 887777655432210 00000 01256777788899999999999999999999999777 88999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 044175 169 NYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 169 ~~~~~~~~~g~~i~~~~~~~l 189 (537)
+.++...++|..++..++...
T Consensus 418 g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 418 GMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999988899999888777654
No 229
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.20 E-value=0.00079 Score=68.17 Aligned_cols=154 Identities=10% Similarity=0.046 Sum_probs=100.4
Q ss_pred HHHHHHhhhh-cCCchhhHH-HHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCC
Q 044175 36 ISMVLYFKNE-MHFNLAGAS-NTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDC 113 (537)
Q Consensus 36 ~~~~~yl~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~ 113 (537)
+++..|+.+. .|++..|.. -+.-+..-.+....++...+.|. +|.|++++++.+...+...++....
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~---------- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT---------- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence 5788899886 899999885 44445666777788889999999 5999999999888787777766653
Q ss_pred CCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc--
Q 044175 114 GKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST-- 191 (537)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~-- 191 (537)
+...+-+.-+.-|++.+. ..+..+++=-..|+++ -.++.++...+.-+|-.++..++=.+..
T Consensus 93 ---------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllvs~~ 156 (412)
T PF01770_consen 93 ---------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLVSFG 156 (412)
T ss_pred ---------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 667777777887777655 2333444433333322 2344555554555555555554443332
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhc
Q 044175 192 EKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 192 ~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
..++.....+......++++..++.
T Consensus 157 ~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 157 GVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456667777776666665554443
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.12 E-value=3.8e-05 Score=81.66 Aligned_cols=145 Identities=17% Similarity=0.037 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHhhh----h-----cCCchhhHHHHHHHHHHHHHHHhhHh----HHHhhhccchhHHHHHHHHH
Q 044175 25 SLENMGFIANAISMVLYFKN----E-----MHFNLAGASNTLTNLMGSTFLLCLVG----GFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~----~-----l~~~~~~~~~~~~~~~~~~~~~~~~~----G~laD~~~Gr~~~~~~~~~~ 91 (537)
+.....|+.+..-++.++.. + .|+. ...++..+...+...+..++. +++.||+ +..+.+.+|.++
T Consensus 282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 34455566655555555432 1 1211 124455555555555666666 6667773 777889999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.+++.+.+.......+ +++ ..+.+++.+..+++++|++...|+..+++.+..|++. |++.++.+
T Consensus 360 ~~l~f~~l~~~~~~~~----~~~------~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g~~ 423 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN----DAG------IVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHhcC----CCC------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHHHH
Confidence 9999888776642111 000 1245688889999999999999999999999999877 99999998
Q ss_pred HHHHHHHHHHHHHHHh
Q 044175 172 LLTTTLAAVIGVTAIV 187 (537)
Q Consensus 172 ~~~~~~g~~i~~~~~~ 187 (537)
+.+..+|+.++..+.+
T Consensus 424 ~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 424 FLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8777777777766654
No 231
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.12 E-value=2.4e-05 Score=59.75 Aligned_cols=70 Identities=14% Similarity=0.050 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLE 92 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 92 (537)
-...++...+.-.+.++++.|++ +.|++..++|.+.++..+...+++++.|+++||+ ||+|.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 34445555555667788999987 5999999999999999999999999999999995 9999888776554
No 232
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.08 E-value=0.0021 Score=65.15 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHH
Q 044175 54 SNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCL 133 (537)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 133 (537)
+.++.+-.+...+.-+..-+..+|+ .-+.=+..+.++..+|.++.+++. +.+.-+++.++
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~-------------------~v~~~l~Gv~l 121 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSP-------------------SVWVRLLGVVL 121 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeecc-------------------chhHHHHHHHH
Confidence 4466666777888888888999994 655445556667777877777653 56677788889
Q ss_pred HHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc-cccchHHHHHHHHHHHHHHHH
Q 044175 134 YALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST-EKAWWGGFLISSIVTFIGFIA 212 (537)
Q Consensus 134 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~-~~g~~~~f~i~~~~~~~~~~~ 212 (537)
.+++.|......-++.+ .+++. ..+.+..+...++++|+..-..++. ..+-|..+.+...+.++..+.
T Consensus 122 as~ssg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~ 190 (402)
T PF02487_consen 122 ASLSSGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLS 190 (402)
T ss_pred HhhhhhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 99999998888887755 44421 2333333444555555544434444 123455666655554434433
Q ss_pred HHh
Q 044175 213 LVI 215 (537)
Q Consensus 213 ~~~ 215 (537)
+++
T Consensus 191 ~f~ 193 (402)
T PF02487_consen 191 YFF 193 (402)
T ss_pred HHH
Confidence 333
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.04 E-value=0.0061 Score=63.56 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=99.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-----chhhHHHHHHHHHHHHHHH-hhHhHHHhhhccchhHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHF-----NLAGASNTLTNLMGSTFLL-CLVGGFISDTFLSRFATCLI 87 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~-----~~~~~~~~~~~~~~~~~~~-~~~~G~laD~~~Gr~~~~~~ 87 (537)
+|.+....+.-+|-.+.|+.+. =++|.+.. +.....++.+...+...+. .++-+++++|+ +|++++.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR-----~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILR-----DTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 4566667777777777776554 24556655 3345677777665655555 88899999995 99999999
Q ss_pred HHHHHHHHHHHHHHHhh-ccccCCCCC--CC--CCccCC----------chhHHHHHHHHHHHHhcccccc-cchhhccc
Q 044175 88 FGTLEVLALVMITVQAY-SEKLHPPDC--GK--SSCVKG----------GIAAYFYASLCLYALGSGGVRG-ALPALGAG 151 (537)
Q Consensus 88 ~~~~~~i~~~l~~~~~~-~~~~~~~~~--~~--~~~~~~----------~~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~ 151 (537)
....+.+-..+.++.-. .++..+|+. .+ +..+.. .....+++. ..+=.....+ .-..+.+|
T Consensus 80 ~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~---~elw~~~vvS~lFW~fand 156 (472)
T TIGR00769 80 VISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVM---AELWGSVVLSLLFWGFANQ 156 (472)
T ss_pred HHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHHHh
Confidence 87777766665554321 122222211 00 000000 011122221 1121222233 55788999
Q ss_pred CCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 044175 152 QFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVS 190 (537)
Q Consensus 152 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~ 190 (537)
.+..++ -.|.++++....|+|..+++.+..++.
T Consensus 157 i~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 157 ITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred cCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998766 678999999999999999998888876
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.03 E-value=1.6e-05 Score=83.88 Aligned_cols=143 Identities=8% Similarity=-0.160 Sum_probs=110.6
Q ss_pred hhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCc
Q 044175 43 KNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGG 122 (537)
Q Consensus 43 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (537)
++.+|+++.+.|.+.....++..++..+.+++.+| ++.|+++.++.++.+++...........+.. .| ..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~---~g------i~ 349 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLA---FG------IS 349 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeeccccc---cC------CC
Confidence 45799999999999999999999999999999999 4999999999999888876543211000000 00 01
Q ss_pred hhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccccc-----chH
Q 044175 123 IAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKA-----WWG 197 (537)
Q Consensus 123 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g-----~~~ 197 (537)
+...+...-++.+++.+........++.+..|++. +++.+++.....++|..+++.+++++.+..| ++.
T Consensus 350 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~ 423 (468)
T TIGR00788 350 DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNN 423 (468)
T ss_pred CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 22344455678888888888888999999999888 8999999998899999999999999987766 554
Q ss_pred HHHH
Q 044175 198 GFLI 201 (537)
Q Consensus 198 ~f~i 201 (537)
.+..
T Consensus 424 ~~~~ 427 (468)
T TIGR00788 424 LWLL 427 (468)
T ss_pred hHHH
Confidence 4443
No 235
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.02 E-value=0.00015 Score=75.78 Aligned_cols=205 Identities=11% Similarity=-0.001 Sum_probs=137.7
Q ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchh------h----HHHHHHHHHHHHHHHhhHhHHHhhh
Q 044175 9 KQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNE-MHFNLA------G----ASNTLTNLMGSTFLLCLVGGFISDT 77 (537)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~------~----~~~~~~~~~~~~~~~~~~~G~laD~ 77 (537)
..|+.||.++.+++.+++..++++....+.+.|+.++ +|-++. + ..+....+.+...+..++--++.+|
T Consensus 252 ~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 252 AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788999999999999999999999999998753 443221 1 1344445566666777778888999
Q ss_pred ccch-hHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC-Cc-cCCchhHHHHHHHHHHHHhcccccccchhhcccCCC
Q 044175 78 FLSR-FATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS-SC-VKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFD 154 (537)
Q Consensus 78 ~~Gr-~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 154 (537)
+ |+ |++..++.++.+++.....+....++-..+..+++ .. ++.......++...+.|+..+.....-.+++++..+
T Consensus 332 ~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 332 W-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred h-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 5 95 67778888888888877765432110000000000 00 001123566677788999999999999999999988
Q ss_pred CCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccccc--chHHHHHHHHHHHHHHHHHHhccc
Q 044175 155 EKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKA--WWGGFLISSIVTFIGFIALVIGKP 218 (537)
Q Consensus 155 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g--~~~~f~i~~~~~~~~~~~~~~~~~ 218 (537)
++..+ .+..++.++.++.+...+..+..|.+.+..| -...+.++++..+++.+..++..|
T Consensus 411 ~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 411 NLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred ccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 54311 5888999998888888888776666443333 455777788777777666555444
No 236
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.01 E-value=5.2e-06 Score=83.47 Aligned_cols=141 Identities=14% Similarity=0.212 Sum_probs=109.9
Q ss_pred CCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHH
Q 044175 351 TPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFW 430 (537)
Q Consensus 351 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (537)
.+.++..-.+.-.+..|++..+.++. ++...+.+|..+-.++++..++. .+.|.
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadry-----------NR~~v~~vG~~iW~~Av~~~~fs---------------~~Fwq 123 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRY-----------NRKRVIAVGIFIWTLAVFASGFS---------------NHFWQ 123 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhc-----------CcceEEeeHHHHHHHHHHHHHHH---------------HHHHH
Confidence 35566666677778889988865443 33355778888888888877774 35677
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCc
Q 044175 431 LSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKN 510 (537)
Q Consensus 431 l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~ 510 (537)
+++.-.+.|+||....|...+++.+.+|++.|++..+++++...+|+.+|......+...+ ..|.-
T Consensus 124 ~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-------~~Wr~------- 189 (493)
T KOG1330|consen 124 VLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-------FWWRW------- 189 (493)
T ss_pred HHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-------cceEE-------
Confidence 7888999999999999999999999999999999999999999999999988777665332 12544
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 511 NANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 511 ~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.|+..++++++..++.+++.+
T Consensus 190 ----af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 190 ----AFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred ----EEEeehHHHHHHHHHHHhhcc
Confidence 488888888888777666543
No 237
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.00016 Score=71.91 Aligned_cols=154 Identities=13% Similarity=0.053 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALV 97 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~ 97 (537)
+.-.+..++---.--++..+++.|+.+..|.+..+++..++.+..+..++..++-++-.|+ -..|.+.+..+...+-++
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3344444444444455668899999888999999999999999999999999999999994 999999888766666555
Q ss_pred HHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHH
Q 044175 98 MITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTL 177 (537)
Q Consensus 98 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 177 (537)
...+.. +. .-+.+.++.|+..+.+.|++.+...+..+++.+ .++.. -.+.-+
T Consensus 318 ~~~l~~-------------------g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s~~---l~maiv 369 (422)
T COG0738 318 AVALIG-------------------GV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGSGL---LVMAIV 369 (422)
T ss_pred HHHHhc-------------------Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----cccee---eeehee
Confidence 555553 32 334456788999999999999999999985442 33332 224568
Q ss_pred HHHHHHHHHhhhcccccchHHHH
Q 044175 178 AAVIGVTAIVYVSTEKAWWGGFL 200 (537)
Q Consensus 178 g~~i~~~~~~~l~~~~g~~~~f~ 200 (537)
|+++-|.+-|++.+..|-...+.
T Consensus 370 GGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 370 GGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred cchHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999988777665
No 238
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.96 E-value=1.1e-05 Score=79.66 Aligned_cols=157 Identities=15% Similarity=0.000 Sum_probs=114.4
Q ss_pred HHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHhhccccC
Q 044175 32 IANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS--RFATCLIFGTLEVLALVMITVQAYSEKLH 109 (537)
Q Consensus 32 ~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G--r~~~~~~~~~~~~i~~~l~~~~~~~~~~~ 109 (537)
-..-+.+++++.+.+.-+.-+.|....-..+.+.+++.+.|.++||+ + |...-..+++...+.+....++.
T Consensus 287 afLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~iP~~~------ 359 (464)
T KOG3764|consen 287 AFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPIPFAT------ 359 (464)
T ss_pred HHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchhHhhh------
Confidence 33446677888888885555888888888999999999999999996 9 54444444444444444444443
Q ss_pred CCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 110 PPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
+...+++-++..+++.+...+...+...+..+.+..+.-.--++..++...+..+|..+||.++|.+
T Consensus 360 -------------~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 360 -------------SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred -------------hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 5667888888888888888888877777776654322111257788888889999999999999999
Q ss_pred cccccchHHHHHHHHHHHH
Q 044175 190 STEKAWWGGFLISSIVTFI 208 (537)
Q Consensus 190 ~~~~g~~~~f~i~~~~~~~ 208 (537)
.+..|++|.-.+-++...+
T Consensus 427 v~~iGF~wl~~iig~~n~i 445 (464)
T KOG3764|consen 427 VEAIGFEWLMTIIGILNLI 445 (464)
T ss_pred eeehhHHHHHHHHHHHHHH
Confidence 9999998876554444433
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.88 E-value=3.7e-05 Score=78.74 Aligned_cols=172 Identities=8% Similarity=-0.058 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHH
Q 044175 21 FVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMIT 100 (537)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~ 100 (537)
++..++-.++.--+.+++--++ ++++-.+.--|.....-..+-.+.-++.++|-.| +|+-+++.+++....+=.+...
T Consensus 377 f~~av~mG~g~~lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~Rf~~~S 454 (618)
T KOG3762|consen 377 FFVAVVMGAGVGLVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVGRFLYYS 454 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHHHHHHHH
Confidence 3334444444444445553344 4556555555544455566677788889999999 5999999999888888777777
Q ss_pred HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH-HHHHHH
Q 044175 101 VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL-TTTLAA 179 (537)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~ 179 (537)
.. +++|+.+..-+++|+..+.++.++.+|+++..|++- ++++-++... .-.+|-
T Consensus 455 ~L-------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~ 509 (618)
T KOG3762|consen 455 YL-------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGK 509 (618)
T ss_pred Hh-------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCc
Confidence 76 378888888999999999999999999999999887 7777777653 346888
Q ss_pred HHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccc
Q 044175 180 VIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPF 219 (537)
Q Consensus 180 ~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~ 219 (537)
.+|.+++|.+.+.+|-+..|.+.++.+++.++.+....+.
T Consensus 510 g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 510 GLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred chhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 8899999999999998999998888887777766554433
No 240
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00015 Score=67.73 Aligned_cols=151 Identities=14% Similarity=0.136 Sum_probs=89.7
Q ss_pred HhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccC
Q 044175 41 YFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVK 120 (537)
Q Consensus 41 yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ 120 (537)
|+-+..|+...+.+.+..+......++..+.|-|+||- |||+..+.-++.+. +..+.-+
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYi----LsCiTKh---------------- 120 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYI----LSCITKH---------------- 120 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHH----HHHHhhc----------------
Confidence 34456788899999988888888888889999999995 99997665555444 4443321
Q ss_pred CchhHHHHHHHHHHHHhcccccccchh-hcccCCCCCChhhhhhhhhHHHHH-HHHHHHHHHHHHHHHhhhcccc--cch
Q 044175 121 GGIAAYFYASLCLYALGSGGVRGALPA-LGAGQFDEKDPKGAKALASYFNYF-LLTTTLAAVIGVTAIVYVSTEK--AWW 196 (537)
Q Consensus 121 ~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~i~~~~~~~l~~~~--g~~ 196 (537)
..++-.++++|++-|++.+......-+ +++|.-.++.=++.. ...-++-. .....+-++++.+.+-.+.+.. |--
T Consensus 121 SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqW-ls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPV 199 (454)
T KOG4332|consen 121 SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQW-LSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPV 199 (454)
T ss_pred CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhh-hhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCC
Confidence 135567889999999998887666654 366665433322111 11111110 0112233344444444444433 445
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044175 197 GGFLISSIVTFIGFIAL 213 (537)
Q Consensus 197 ~~f~i~~~~~~~~~~~~ 213 (537)
.+|-.++.+..++..+.
T Consensus 200 APFdAAacfLaigmAvi 216 (454)
T KOG4332|consen 200 APFDAAACFLAIGMAVI 216 (454)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 56766665555554443
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.83 E-value=0.021 Score=58.91 Aligned_cols=59 Identities=15% Similarity=0.033 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 427 SLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVD 485 (537)
Q Consensus 427 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~ 485 (537)
+...++.+.++.=+|.-..-.+..-+.-|..|++.||...|+-+..+++...+...++-
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555556666666666666677777888999999999999999999999888766543
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00015 Score=76.08 Aligned_cols=162 Identities=12% Similarity=0.078 Sum_probs=101.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFATCLIFGTLE 92 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~~~~~~~~ 92 (537)
.+|...+..++.-...|+...+.+.|+++..|++..+++.+...+.++..++.+++|+++||. +.+|..+.....+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 568899999999999999999999999986779999999999999999999999999999992 15666655555444
Q ss_pred HH-HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHH
Q 044175 93 VL-ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYF 171 (537)
Q Consensus 93 ~i-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 171 (537)
.+ |.+.+.... .......+.+....+.+...++...-..+....+. ++.+..+..
T Consensus 354 ~~~g~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~~~~~ 409 (495)
T KOG2533|consen 354 AIIGAISLLAAA-------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTTVSAI 409 (495)
T ss_pred HHHHHHHHHhhc-------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHHHhhh
Confidence 33 323333321 11222222222223333333444444455443332 144444444
Q ss_pred HHHHHH-HHHHHHHHHhhhcccccchHHHHH
Q 044175 172 LLTTTL-AAVIGVTAIVYVSTEKAWWGGFLI 201 (537)
Q Consensus 172 ~~~~~~-g~~i~~~~~~~l~~~~g~~~~f~i 201 (537)
....+. |.+.+++..+.....++|...|..
T Consensus 410 i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~ 440 (495)
T KOG2533|consen 410 IDGTGSAGAISGQLFRSLDAPRYGWGAVFYM 440 (495)
T ss_pred hcchhHHHHhhhhhcccccCcchhhhhHHHH
Confidence 444444 444444445555555788888844
No 243
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.69 E-value=0.001 Score=71.15 Aligned_cols=144 Identities=13% Similarity=-0.018 Sum_probs=83.4
Q ss_pred CcchHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHH
Q 044175 13 GFRACGFIFVLSSLENM-GFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTL 91 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 91 (537)
.+|+....+....+..+ ++..+..+.+..+ +..|.+... ............++..++.++.||+ |||+.++.+...
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 44544444444444444 4444444444444 455665443 5555556777888888889999995 999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHH-HHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYAS-LCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
..++.++++..........+ +. .....+.++. .+.......+..|....+.+|.+|.+- |+++.++
T Consensus 369 m~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~~s~ 435 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPN------SS-KGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKGASL 435 (513)
T ss_pred HHHHHHHHHHHHHHhccCCC------cc-cchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------HhhhHHH
Confidence 99999988866432211000 00 0011112222 222222233334555567899999877 6666666
Q ss_pred HH
Q 044175 171 FL 172 (537)
Q Consensus 171 ~~ 172 (537)
..
T Consensus 436 ~~ 437 (513)
T KOG0254|consen 436 AV 437 (513)
T ss_pred HH
Confidence 43
No 244
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.69 E-value=2.5e-07 Score=97.09 Aligned_cols=185 Identities=17% Similarity=0.040 Sum_probs=109.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
+.+...+....+..+..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||++++.+..+.++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccc
Confidence 3444455555555454444444444455556676666 2222334566667888888999995 999999999988888
Q ss_pred HHHHHH-HHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcc-cccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 95 ALVMIT-VQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSG-GVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 95 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
+.+.++ .....++. ++ ..+... ++...+...+.+ +..+....+.+|.+|.+. |+++.++.+
T Consensus 329 ~~~~~~~~~~~~~~~-------~~---~~~~~~-i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~ 391 (451)
T PF00083_consen 329 CSLILGIIFFLGVSS-------SS---WWSILS-IVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSY 391 (451)
T ss_pred ccccccccccccccc-------cc---cccccc-ceeeeeccccccccccccccccccccccccc------ccccccccc
Confidence 777665 11100000 00 001111 112222212222 334666688899999988 899999988
Q ss_pred HHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHhcccc
Q 044175 173 LTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALVIGKPF 219 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~~~~~~ 219 (537)
....+++.+++.+...+.+..+-...|.+.+.++++..+..++..|+
T Consensus 392 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 392 AVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 88888888888888877766662334555444444444444444443
No 245
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.54 E-value=0.0011 Score=72.47 Aligned_cols=129 Identities=9% Similarity=-0.008 Sum_probs=90.1
Q ss_pred CCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--hhhh---------c
Q 044175 351 TPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQR--RNAF---------N 419 (537)
Q Consensus 351 ~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~--~~~~---------~ 419 (537)
.+.+.+...+...+..+++..+.++. ++.+.+.+|.++++++.++.++.+... +... .
T Consensus 70 ~G~i~s~~~i~~~~~~i~v~~~~~r~-----------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 70 SGLINGSYEIGNLLLIIFVSYFGTKL-----------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred ceeeeehhhHHHHHHHHHHHHhhccc-----------CcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 34555666667777766666644333 233457778888888877776543110 0000 0
Q ss_pred ------c--C----------------CCc-cchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHH
Q 044175 420 ------Q--M----------------PPK-QISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLS 474 (537)
Q Consensus 420 ------~--~----------------g~~-~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~ 474 (537)
. + +.. ...+..++++.++.|+|++...+...+++.|.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 0 000 11345566789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 044175 475 FGNFLSSVFVDIINAV 490 (537)
Q Consensus 475 ~g~~~~~~l~~~i~~~ 490 (537)
+|..+|+.+.+.+.+.
T Consensus 219 iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999999998877643
No 246
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.51 E-value=0.003 Score=67.50 Aligned_cols=150 Identities=13% Similarity=0.046 Sum_probs=101.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCch---hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHH-HH
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNL---AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCL-IF 88 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~-~~ 88 (537)
++|.+...+++.++..+.||++..+.+......++-+. .+.++....+.++..++..+.|.+.-++ +|-|-.+ ++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~~ 386 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIFG 386 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHHH
Confidence 45677777888889999999988888877666665544 2567777788888889999999999884 8766654 56
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHH
Q 044175 89 GTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYF 168 (537)
Q Consensus 89 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 168 (537)
.++..++...++... .++....+...++.|+|.|...........-..|+++ .+.+.
T Consensus 387 ~~~~ta~~Gama~~~-----------------~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ig~a~ 443 (599)
T PF06609_consen 387 SVLMTAFCGAMAAVR-----------------PDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------IGTAT 443 (599)
T ss_pred HHHHHHHHHHHHHcc-----------------CCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------HHHHH
Confidence 555555545554443 1233344555678888888877666665555556555 67777
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 044175 169 NYFLLTTTLAAVIGVTAI 186 (537)
Q Consensus 169 ~~~~~~~~~g~~i~~~~~ 186 (537)
++....-.+|+.++..+.
T Consensus 444 gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 444 GLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHhhHHHHHHH
Confidence 666555566666655443
No 247
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.40 E-value=0.004 Score=64.28 Aligned_cols=84 Identities=10% Similarity=0.160 Sum_probs=68.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHH
Q 044175 389 QLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSF 468 (537)
Q Consensus 389 ~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~ 468 (537)
..+.+.++.+.-++..++.++. .+...+.+.-++.|++|+... +...++++.+|++.|+++.|+
T Consensus 91 ~K~vL~l~~l~Wsl~t~L~~fa---------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi 154 (511)
T TIGR00806 91 YKPVLVLQALSFVCVWLLLLLG---------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAY 154 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHH
Confidence 3445666666666665555553 356777888999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 044175 469 TFLSLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 469 ~~~~~~~g~~~~~~l~~~i~ 488 (537)
++....+|.++++.+.+.+.
T Consensus 155 ~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 155 SRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998843
No 248
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.39 E-value=0.0049 Score=64.83 Aligned_cols=159 Identities=8% Similarity=-0.071 Sum_probs=111.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh-H---
Q 044175 13 GFRACGFIFVLSSLENMGFIANAISMVLYFKNE-----MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF-A--- 83 (537)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~-~--- 83 (537)
+-..+..+++...+-...|....+.+..|.++. +|++ -..++..+...+...+..|+.+++=.| .+|| |
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~-l~~~~~~~s 343 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKE-SVAGNRTVR 343 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHH-HhcCCCCCC
Confidence 334556666666777777777777888887664 2322 235666677777777888888888666 3432 1
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhh
Q 044175 84 ---TCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKG 160 (537)
Q Consensus 84 ---~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 160 (537)
=+.+|+++..++.+.+.++....+ +.| ..+..++++..+++++|+=+..|...+++++..|++-
T Consensus 344 ~~~Kfa~g~~~~g~~f~~l~~~~~~~~----~~~------~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~--- 410 (493)
T PRK15462 344 IWGKFALGLGLMSAGFCILTLSARWSA----MYG------HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV--- 410 (493)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcC----CCC------CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH---
Confidence 167778888888877766542111 001 1367888899999999999999999999999999887
Q ss_pred hhhhhhHHHHHHHHH-HHHHHHHHHHHhhh
Q 044175 161 AKALASYFNYFLLTT-TLAAVIGVTAIVYV 189 (537)
Q Consensus 161 ~~~r~~~~~~~~~~~-~~g~~i~~~~~~~l 189 (537)
++..++.++... .+|..++..+++..
T Consensus 411 ---~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 411 ---TGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999987643 57777766666554
No 249
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.33 E-value=0.0025 Score=49.22 Aligned_cols=73 Identities=8% Similarity=0.022 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Q 044175 26 LENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQA 103 (537)
Q Consensus 26 ~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~ 103 (537)
+.||.| +.+.+.++++.++|.++.+++-+...+++.++.+...++.++. .+++.+..++++..+.++.+++..
T Consensus 6 igRFay----TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 6 IGRFAY----TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hHHHHH----HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345554 4455677889999999999999999999999999999999994 889999999999999999988864
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.29 E-value=0.0095 Score=52.27 Aligned_cols=106 Identities=14% Similarity=0.098 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHH
Q 044175 54 SNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCL 133 (537)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 133 (537)
..-+++......+.+++...+-++ +|.|+.+.+|.+.+.+-...... .+...++.+-++
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~~--------------------~~~~~l~~~s~l 98 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFFY--------------------PNSYTLYPASAL 98 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHHHHHH
Confidence 334445566677777888899999 59999999998877644332221 145677888899
Q ss_pred HHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 044175 134 YALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAI 186 (537)
Q Consensus 134 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 186 (537)
.|+|.+..+.....++.+..++++ +++-.++++...+.+.++|.++.
T Consensus 99 ~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 99 LGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876655 66777776666666666655444
No 251
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.09 E-value=0.00033 Score=70.58 Aligned_cols=166 Identities=16% Similarity=0.115 Sum_probs=119.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc---cchhHHHHHHHH-
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF---LSRFATCLIFGT- 90 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~~~~~~- 90 (537)
+.+..+..+.+--.+++-.=..+.++|++ .+|.+-...+.+-.+.-+...+.+|+.|..+||- +||||-++....
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 45555666666666666666678888985 6899888888888888899999999999999983 698888777654
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCC-CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHH
Q 044175 91 LEVLALVMITVQAYSEKLHPPDCGK-SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFN 169 (537)
Q Consensus 91 ~~~i~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 169 (537)
...++.++...+. ++...=+.+ ..+++.-....++++..+.=++.-..+...-++.+|...+++. +.++.+
T Consensus 111 ~i~~~l~Lig~aa---Dig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~-----~~~Ans 182 (498)
T KOG0637|consen 111 LIAVSLFLIGYAA---DIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK-----KTRANS 182 (498)
T ss_pred HHHHHHhhhhhHh---hhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-----hhccch
Confidence 4566777766663 222211122 2223445567778888888888878888899999999875541 222788
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 044175 170 YFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 170 ~~~~~~~~g~~i~~~~~~~l 189 (537)
++.....+|+.+|...+++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 88888899999998888754
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.09 E-value=0.00097 Score=67.38 Aligned_cols=179 Identities=11% Similarity=0.056 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHH--------HHHHHH-HHHHHHhhHhHHHhhhccchhHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASN--------TLTNLM-GSTFLLCLVGGFISDTFLSRFATCL 86 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~--------~~~~~~-~~~~~~~~~~G~laD~~~Gr~~~~~ 86 (537)
.+.......+.--.++|+...+...-++ ..|+.+.+... ...+.. .....+..++.++.|+ +|||+.-+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~ 382 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQL 382 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHH
Confidence 3444445555555666666655555554 34544333222 111111 2222255566778999 59999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhh
Q 044175 87 IFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALAS 166 (537)
Q Consensus 87 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 166 (537)
-+.+++.+..+.++.... +.+ .+...+...-+.+-++.-+-.++....-+|.||.+. |+.
T Consensus 383 ~GF~~~~i~~~~~~~~y~--~~~------------~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv------R~t 442 (538)
T KOG0252|consen 383 MGFFIMTIFFFVIAGPYN--QLE------------NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV------RST 442 (538)
T ss_pred hhHHHHHHHHHHHcCCcc--ccc------------ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH------hhh
Confidence 999988887777766531 110 112222222222334444444555556679999887 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcc-----cccchHHHHHHHHHHHHHHHHHHhc
Q 044175 167 YFNYFLLTTTLAAVIGVTAIVYVST-----EKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 167 ~~~~~~~~~~~g~~i~~~~~~~l~~-----~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
+-++...+.-+|+.++...-.++.+ ..+.+..|++.+.++.+..+..++.
T Consensus 443 ~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 443 CHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 9999888888999999999899988 6788999998888877776655544
No 253
>PTZ00207 hypothetical protein; Provisional
Probab=96.82 E-value=0.0082 Score=64.43 Aligned_cols=172 Identities=10% Similarity=-0.016 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCchhh--HHHHHHHHHHHHHHHhhHhHHHhhhccchhH---------
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKNEM-HFNLAG--ASNTLTNLMGSTFLLCLVGGFISDTFLSRFA--------- 83 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l-~~~~~~--~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~--------- 83 (537)
.+|.++...+|..-+-..+..++. ++.+.+ |.+.++ ....++...+.++++.+.+|+++.- .-||+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~-~~~~~~~~r~prt~ 431 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW-SQKRRAEDRVPITI 431 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH-HHhhccccccchhH
Confidence 578888877777666555544444 333566 663333 2237889999999999999999832 23332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhh
Q 044175 84 TCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKA 163 (537)
Q Consensus 84 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (537)
.+.+..+ ..++.+++.+.. ....++++-++.|++.|..++...+.++|.|. ++
T Consensus 432 ~l~~~~~-~~~~~lll~~~~-------------------p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~------ 484 (591)
T PTZ00207 432 ALFIPSV-CIITMLTLFLTL-------------------PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KD------ 484 (591)
T ss_pred HHHHHHH-HHHHHHHHHHHC-------------------CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc------
Confidence 2333333 666666666652 11578899999999999999999999999999 66
Q ss_pred hhhHHHHHHHHHHHHHHHH-HHHHhhhcc-------------cccchHHHHHHHHHHHHHHHHHHhc
Q 044175 164 LASYFNYFLLTTTLAAVIG-VTAIVYVST-------------EKAWWGGFLISSIVTFIGFIALVIG 216 (537)
Q Consensus 164 r~~~~~~~~~~~~~g~~i~-~~~~~~l~~-------------~~g~~~~f~i~~~~~~~~~~~~~~~ 216 (537)
-++.++....+..+|+.+- -.+.|.+-+ ...++..|++.+.+++++.+.....
T Consensus 485 ~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 485 PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 6888888887888887764 334454421 1237788888777776666654443
No 254
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.73 E-value=0.02 Score=56.88 Aligned_cols=151 Identities=15% Similarity=0.104 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccc-hhHHHHHHHHHHH
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYF-KNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLS-RFATCLIFGTLEV 93 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~G-r~~~~~~~~~~~~ 93 (537)
+.+.++....+-..-.|...-+...++ .+.+|+++.|.|-+.+.-.+...+.+..-....||..| -+-.+..++.++.
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 344444444333333344444444444 45799999999988877777666666666667777522 3334444544444
Q ss_pred HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHH
Q 044175 94 LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLL 173 (537)
Q Consensus 94 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 173 (537)
-..++...+. ....++++..+-.+..+...++...++....|..+ |+...+....
T Consensus 341 P~~llls~~~-------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~S 395 (451)
T KOG2615|consen 341 PAFLLLSLAR-------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRS 395 (451)
T ss_pred HHHHHHhccc-------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHH
Confidence 4555555543 45678888888899999999999999999988777 9999999999
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 044175 174 TTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 174 ~~~~g~~i~~~~~~~l~~ 191 (537)
...++-++||+++|.+.+
T Consensus 396 l~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 396 LGALARAIGPLVSGVIFS 413 (451)
T ss_pred HHHHHHHhhhhhhheeEE
Confidence 999999999999987653
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.66 E-value=0.83 Score=45.66 Aligned_cols=58 Identities=10% Similarity=0.061 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHH-HHHHHHH
Q 044175 429 FWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFL-SSVFVDI 486 (537)
Q Consensus 429 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~-~~~l~~~ 486 (537)
...+..+.+.+...-.......++-++++|+...|++|.+.|...++|+-. +.....+
T Consensus 370 il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l 428 (510)
T KOG3574|consen 370 ILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWL 428 (510)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHh
Confidence 334456777777777778888999999999999999999999999988766 4433333
No 256
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.65 E-value=0.13 Score=56.41 Aligned_cols=166 Identities=13% Similarity=0.016 Sum_probs=106.5
Q ss_pred cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhH
Q 044175 46 MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAA 125 (537)
Q Consensus 46 l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (537)
.+...........++.....+..+.....+|-.-|+-..+..-.+...+..+.+.+... +.. +......
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a~----------~~~~~~~ 83 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GAI----------PSSGHPL 83 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-ccC----------cccccch
Confidence 34444456677788899999999999999999766666666666667777776766652 110 0011123
Q ss_pred HHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccccc-chH------H
Q 044175 126 YFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKA-WWG------G 198 (537)
Q Consensus 126 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g-~~~------~ 198 (537)
...+..+.+.++.++..++-+.+.+++.+..+ ..++.+..+++++..+.+.+. .+++..+..... +.. .
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~~~ 159 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQDC 159 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCcc
Confidence 44556777889999999999999999987543 555667899999988888774 566666654332 321 2
Q ss_pred HHHHH-HHHHHHHHHHHhccccccccCCC
Q 044175 199 FLISS-IVTFIGFIALVIGKPFYRNQQPG 226 (537)
Q Consensus 199 f~i~~-~~~~~~~~~~~~~~~~~~~~~~~ 226 (537)
|..+. +..++.++.+......++..+++
T Consensus 160 ~~~aF~i~~i~m~ia~lvf~~g~k~y~~~ 188 (654)
T TIGR00926 160 YPLAFGVPAILMILALIVFMAGSKMYKKK 188 (654)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 43333 33444445555554444433443
No 257
>PRK03612 spermidine synthase; Provisional
Probab=96.54 E-value=0.12 Score=55.20 Aligned_cols=174 Identities=11% Similarity=0.023 Sum_probs=92.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHH-HHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCL-IFGTLEV 93 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~-~~~~~~~ 93 (537)
+.+....++.-+..++|- ....-.+...+|-+....+.+++++..+..++..++|+++++- -|+.... ++..+..
T Consensus 17 ~~l~~~~f~sg~~~L~yE---v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~ 92 (521)
T PRK03612 17 ALLLAAVFVCAACGLVYE---LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLG 92 (521)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHH
Confidence 333334444444444443 3444445556788888899999999999999999999987552 3332211 1111111
Q ss_pred -HHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHH
Q 044175 94 -LALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFL 172 (537)
Q Consensus 94 -i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 172 (537)
++..+..... +.. ......++...++.++..|+..|....+..+... ++ .++..+..|
T Consensus 93 ~~~~~ll~~~~--~~~------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly 151 (521)
T PRK03612 93 GLSALILYAAF--AFQ------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVL 151 (521)
T ss_pred HHHHHHHHHHH--HHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhH
Confidence 1111111111 000 0011222333445677777777776665544322 11 245566667
Q ss_pred HHHHHHHHHHHHHHhhhcc-ccc-chHHHHHHHHHHHHHHHHH
Q 044175 173 LTTTLAAVIGVTAIVYVST-EKA-WWGGFLISSIVTFIGFIAL 213 (537)
Q Consensus 173 ~~~~~g~~i~~~~~~~l~~-~~g-~~~~f~i~~~~~~~~~~~~ 213 (537)
....+|+++|.++.+++.- ..| .+..++++.+-.+++++.+
T Consensus 152 ~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~ 194 (521)
T PRK03612 152 AADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFL 194 (521)
T ss_pred hHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 7788899988888877543 455 3444444444334443333
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.50 E-value=0.028 Score=57.03 Aligned_cols=183 Identities=14% Similarity=0.080 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLAL 96 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~ 96 (537)
+.++.+........+|++.+.+-.-+ ..-|++...+|.+.....+++.++..+.|.++||.=.-|+++++......++.
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~ 346 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT 346 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 34455555555555565555554333 34577778899999999999999999999999995234444555444444443
Q ss_pred HHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccC-CCCCChhhhhhhhhHHHHHHHHH
Q 044175 97 VMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQ-FDEKDPKGAKALASYFNYFLLTT 175 (537)
Q Consensus 97 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~ 175 (537)
........ . ....+.++..-.+.|...-...|.-.-+..|. +|..| +...+......
T Consensus 347 ~~l~~~t~--~-------------~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~g 404 (480)
T KOG2563|consen 347 LMLLTCTL--F-------------LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSG 404 (480)
T ss_pred HHHHHhhc--c-------------CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeeh
Confidence 22221111 0 01234444555667777777888888888887 45444 23333333333
Q ss_pred HHHHHHHHHHHhhhccccc---chH-HHHHHHHHHHHHHHHHHhccccccc
Q 044175 176 TLAAVIGVTAIVYVSTEKA---WWG-GFLISSIVTFIGFIALVIGKPFYRN 222 (537)
Q Consensus 176 ~~g~~i~~~~~~~l~~~~g---~~~-~f~i~~~~~~~~~~~~~~~~~~~~~ 222 (537)
++-+.+-.++-+...+..+ |.. .-+.......+..++..+.++++++
T Consensus 405 q~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 405 QIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred hHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 4333444455555555444 333 2222333344444445555555544
No 259
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.32 E-value=0.1 Score=55.88 Aligned_cols=106 Identities=8% Similarity=-0.019 Sum_probs=75.4
Q ss_pred HHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhccccc
Q 044175 63 STFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVR 142 (537)
Q Consensus 63 ~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~ 142 (537)
.........+.+-|++ |||.....+..+..++.+..+..... .......+...+...+.+...
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~ 424 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLPDD----------------LGGWLHWILPLLGKFFIGSAF 424 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhhcc----------------chhHHHHHHHHHHHHHHHHHH
Confidence 5555556668999995 99999999999999999888876420 110122222333334444445
Q ss_pred ccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 143 GALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
.....+.+|.+|+.. |..+.+.......+|.+++|.+......
T Consensus 425 ~~~~~~~~el~pt~~------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 425 NLIFLYSAELIPTVV------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 556888999999877 8889998888889999999887754443
No 260
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.23 E-value=0.021 Score=59.58 Aligned_cols=125 Identities=18% Similarity=0.142 Sum_probs=104.3
Q ss_pred HHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhH-HHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 044175 38 MVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGG-FISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKS 116 (537)
Q Consensus 38 ~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G-~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 116 (537)
...|++..++++..+.+...+.......++..+.. .+.-. +|-|+++.+|+....+...+.+++.
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~~------------- 329 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFAT------------- 329 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHhc-------------
Confidence 35678889999999999999999999999999998 66766 6999999999999999999999884
Q ss_pred CccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 117 SCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
+.++.+...++.++ .+...|...++.+.+.++++ +++.+++....-.+.+.++|.+-+.+
T Consensus 330 ------~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 330 ------ETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred ------cchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 45666666555444 46778888999999988888 89999999988888888888877655
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.01 E-value=0.091 Score=54.60 Aligned_cols=152 Identities=13% Similarity=0.094 Sum_probs=95.7
Q ss_pred ccchHhHHHHhhhhcchhccccccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccc-hHHHHHHH
Q 044175 356 VIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQI-SLFWLSFQ 434 (537)
Q Consensus 356 ~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~l~~~ 434 (537)
....++..+..|..... ..|.. +..+-+..|.+++.+|-+++...+.. +. ..+++..+
T Consensus 78 aa~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~~-----------~~~~~y~mL~~ 136 (488)
T KOG2325|consen 78 AASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAYV-----------PNGVKYLMLVA 136 (488)
T ss_pred HHHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHhc-----------ccchHHHHHHH
Confidence 33455555555555542 22221 23555889999999999988665433 23 66788889
Q ss_pred HHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHH
Q 044175 435 YCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANL 514 (537)
Q Consensus 435 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~ 514 (537)
.++.|+|.+.... .=.|+++..-.+.|.++++.......+|.++||.+-..+..+...+ -.|.+ +..-+.|..
T Consensus 137 R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G----~~i~~--~~~~n~YTa 209 (488)
T KOG2325|consen 137 RILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKG----FMILP--GLIFNMYTA 209 (488)
T ss_pred HHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCc----eEEcC--cceEEecch
Confidence 9999998655433 3577777666777888888888777888888887776665443221 01222 122233444
Q ss_pred HHHHHHHHHHHHHHHHhhhcc
Q 044175 515 FYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 515 ~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.=|+...+.++.+++..+..|
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred HHHHHHHHHHHHHHHHHhhee
Confidence 556777777777776666544
No 262
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.41 E-value=0.21 Score=51.61 Aligned_cols=155 Identities=11% Similarity=-0.022 Sum_probs=97.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhh----h-cCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchh-------H
Q 044175 16 ACGFIFVLSSLENMGFIANAISMVLYFKN----E-MHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRF-------A 83 (537)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~----~-l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~-------~ 83 (537)
....+++....-...|-...+.+..|.++ + +|+ +-...+..+...+.-.+..|+..++--|. +|+ .
T Consensus 285 ~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~-~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~ 362 (498)
T COG3104 285 AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGF-EVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPI 362 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccce-ecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcch
Confidence 34444444444455555555666667654 2 221 12234555555666667778888887773 544 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhh
Q 044175 84 TCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKA 163 (537)
Q Consensus 84 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 163 (537)
-+-+++.++..+.+.+....... .+| . ...+.++++.+.+++++|+=++.|+..++++...|++-
T Consensus 363 KFalGl~l~g~~fl~l~~~~~~~--~~~-~------~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------ 427 (498)
T COG3104 363 KFALGLILAGLGFLILLLAGIWF--GGP-S------GLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------ 427 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh--cCC-C------CCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------
Confidence 25566666666666665542111 100 0 02477899999999999999999999999999988654
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHh
Q 044175 164 LASYFNYFLLTTTLAAVIGVTAIV 187 (537)
Q Consensus 164 r~~~~~~~~~~~~~g~~i~~~~~~ 187 (537)
.+..++.+......|..++..+++
T Consensus 428 ~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 428 KSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHHHHHHHhhceecc
Confidence 677777777777777777665555
No 263
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.37 E-value=0.13 Score=52.51 Aligned_cols=122 Identities=13% Similarity=0.169 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcc---hhHHHHH
Q 044175 391 QRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAG---MRTLSTS 467 (537)
Q Consensus 391 ~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~---~rg~~~g 467 (537)
+.+.+|.++..+|.+++...... ....+..+...+.++..++++|.+..=|+..++..++++++ .|..+..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~------~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP------PSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS------SSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc------chhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 34677888888888775543111 00001234566777888999999999999999999999876 4566677
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHhhhcccC
Q 044175 468 FTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYLYAAAWY 537 (537)
Q Consensus 468 ~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~~y 537 (537)
.+....++|..++....+.+.+ +.++...|++.++..+++++.++.--++|
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~-------------------~~~~~~~f~i~~~~~~~~~~~f~~~~~~y 126 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQ-------------------NYGWFLGFGIPAIGMLLALIVFLSGRKRY 126 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHH-------------------CS-HHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred HHHHHHhhhhHhhcccchhhcc-------------------ccchhhhhhHHHHHHHHHHHHHHhCCcCC
Confidence 7788888999988777665551 13556678888888888877766655544
No 264
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.21 E-value=4.9 Score=42.40 Aligned_cols=166 Identities=10% Similarity=0.001 Sum_probs=89.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---CchhhHHHHHHHHHH-HHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMH---FNLAGASNTLTNLMG-STFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~---~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
++.++.+.++-++-.+.|..+. -++|.+= .++.....+-....+ +..+...+-.+++|++ +|.+++.+..
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~ 96 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 3455666666666655543222 1222221 133444455543333 4566677789999995 9999999887
Q ss_pred HHHHHHHHHHHHHh-hccccCCCCC--CCCCccCCchh---------HHHHHHHHHHHHhcccccc-cchhhcccCCCCC
Q 044175 90 TLEVLALVMITVQA-YSEKLHPPDC--GKSSCVKGGIA---------AYFYASLCLYALGSGGVRG-ALPALGAGQFDEK 156 (537)
Q Consensus 90 ~~~~i~~~l~~~~~-~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~l~g~g~g~~~~-~~~~~~~~~~~~~ 156 (537)
..+..-..+.++.- .+.+..+|+. .+.+-....+. |.+.+.-+..-+=.....+ .-..+.+|.++.+
T Consensus 97 ~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~ 176 (491)
T PF03219_consen 97 IPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVE 176 (491)
T ss_pred HHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 77666555555432 1223333311 11000000011 1111111111111111122 3467888998877
Q ss_pred ChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 157 DPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVST 191 (537)
Q Consensus 157 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~ 191 (537)
+ ..|.+.++....|+|.+++..+..++.+
T Consensus 177 e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 177 E------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 6789999999999999999888877766
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.43 E-value=0.011 Score=63.21 Aligned_cols=169 Identities=12% Similarity=0.108 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHH-HHHHHhhHhHHHhhhc-cchhHHHHHHHHHHHHH
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMG-STFLLCLVGGFISDTF-LSRFATCLIFGTLEVLA 95 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~G~laD~~-~Gr~~~~~~~~~~~~i~ 95 (537)
....+...++.+...+..+++|.|+..+|+.++.+++.+.....+ +..++.++||++..|+ ++.|+++.+..+...++
T Consensus 308 ~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 308 MCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 456777788888888999999999999999999999998877555 7889999999999995 45667766666655554
Q ss_pred HHHHH----H-Hhh--ccccCCCC---------------CC-----------CCCccCC--chhHHHHHHHHHHHHhccc
Q 044175 96 LVMIT----V-QAY--SEKLHPPD---------------CG-----------KSSCVKG--GIAAYFYASLCLYALGSGG 140 (537)
Q Consensus 96 ~~l~~----~-~~~--~~~~~~~~---------------~~-----------~~~~~~~--~~~~~~~~~~~l~g~g~g~ 140 (537)
.+... + ... ...+..++ |- .-.|+.. .....+++..++..+..+.
T Consensus 388 ~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~ 467 (539)
T PF03137_consen 388 VILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFM 467 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHh
Confidence 44311 0 000 00111111 10 0122222 2345555555555454555
Q ss_pred ccccchhhcccCCCCCChhhhhhhhhHHHHHHHHH-HHHHHHHHHHHhhhccc
Q 044175 141 VRGALPALGAGQFDEKDPKGAKALASYFNYFLLTT-TLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~i~~~~~~~l~~~ 192 (537)
.........-+..++++ |+-+.++..... -+|.+=+|++-|.+.+.
T Consensus 468 ~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 468 SQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -----------------------------------------------------
T ss_pred cccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 44444455556777777 888888877554 47888889888888775
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.05 E-value=1.7 Score=45.01 Aligned_cols=135 Identities=10% Similarity=-0.021 Sum_probs=99.9
Q ss_pred HHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 044175 36 ISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGK 115 (537)
Q Consensus 36 ~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~ 115 (537)
..+..|+..+ |+++...|..-+.-.+....++.+..++.+|+ |..|+=+++.....+...++..+-..+....
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~----- 351 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPF----- 351 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCc-----
Confidence 4577888776 99999999999999999999999999999995 9999999998877766655554322111000
Q ss_pred CCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Q 044175 116 SSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIV 187 (537)
Q Consensus 116 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 187 (537)
+..+...++.+.++-=+|.=+..-+...++.|..|+++ |+...+......++--.+....+-
T Consensus 352 ----~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 352 ----SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred ----hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 01244555555555556666677788888899888777 999999988778887777665553
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.94 E-value=0.82 Score=40.13 Aligned_cols=61 Identities=8% Similarity=0.087 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 427 SLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDII 487 (537)
Q Consensus 427 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i 487 (537)
+.+.+++.-++.|++....+.+.-.+..+..+++.|++..+++....+.+.++|..+...+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888899999999999999999999999999999999999999999888887766543
No 268
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.68 E-value=1.1 Score=43.57 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcC--------------CchhhHHHHHHHHHHHHHHHhhHhHHHhhhc-cchh
Q 044175 18 GFIFVLSSLENMGFIANAISMVLYFKNEMH--------------FNLAGASNTLTNLMGSTFLLCLVGGFISDTF-LSRF 82 (537)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~--------------~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~-~Gr~ 82 (537)
....+.-+|++.+|..+..-.-..+.++.+ -.....+.++..-.+-..+.-+..-..-||+ +|.|
T Consensus 15 ~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~~R 94 (409)
T KOG3880|consen 15 VAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFGFR 94 (409)
T ss_pred hHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccchH
Confidence 334455678888876444434334433322 0111245566666666777777778888884 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhccc
Q 044175 83 ATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAG 151 (537)
Q Consensus 83 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 151 (537)
+.+..++.+.+.++.+++. +.++-+.+..+..++.|.-..+.-++-+.
T Consensus 95 --i~~~v~~sa~s~~lVafs~-------------------s~~~sL~GV~~aSissGlGEiTFL~lss~ 142 (409)
T KOG3880|consen 95 --IALVVLLSALSFFLVAFSN-------------------SVPMSLLGVVFASISSGLGEITFLALSSR 142 (409)
T ss_pred --HHHHHHHHhcceEEEEecc-------------------chhHHHhhhhhhhhcCCcceeehhhhhcc
Confidence 3344455666666666653 56778888888889988877776665554
No 269
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=92.92 E-value=1.5 Score=41.85 Aligned_cols=90 Identities=10% Similarity=0.059 Sum_probs=60.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHH
Q 044175 388 TQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFNQMPPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTS 467 (537)
Q Consensus 388 ~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 467 (537)
++...+.+|.++..+|..........+ . .+.+.|.+.....+.+.+..........-..+.+|+ .||++.|
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~~---i-----~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvg 134 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSGR---I-----PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVG 134 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCc---c-----CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceeh
Confidence 556667888888888876655432221 0 113455555555666666666666666666789986 6999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 044175 468 FTFLSLSFGNFLSSVFVDI 486 (537)
Q Consensus 468 ~~~~~~~~g~~~~~~l~~~ 486 (537)
+.....++++.+-..+...
T Consensus 135 ilk~~~GLSaai~t~i~~~ 153 (250)
T PF06813_consen 135 ILKGFFGLSAAIFTQIYSA 153 (250)
T ss_pred hhhHHHHhHHHHHHHHHHH
Confidence 9999999888875555443
No 270
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.38 E-value=16 Score=38.15 Aligned_cols=59 Identities=12% Similarity=0.157 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044175 429 FWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDII 487 (537)
Q Consensus 429 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i 487 (537)
++.++..+++|+..+........+..+..+++.|..+..+..+.-.+|-..|..+.-.+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555588899999999999999999999999999999999999888888887765543
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.62 E-value=17 Score=37.02 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 044175 427 SLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVD 485 (537)
Q Consensus 427 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~ 485 (537)
+-+|.+....++|+..+-.......++.+..|++++..+..+..+....|-..|..+.-
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 34666677888999999999999999999999999999988888887777777766543
No 272
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.57 E-value=0.67 Score=47.46 Aligned_cols=160 Identities=13% Similarity=0.010 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhhhhcchhhheeccccCCCCCccccCCCcccccchHhHHHHhhhhcchhccccccccCCCCCCCchHH
Q 044175 313 MPILASTILMNTCLAQLQTFSVTQGAYMDPQLGSIKVPTPSIPVIPLLFMSILLPVYELLFVPFARKITGHPSGITQLQR 392 (537)
Q Consensus 313 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 392 (537)
..+.......|..-.++.+.+.++ .+.. ..-.+.++.+.++..++.+|+.+...|+--.|+.|| +.-
T Consensus 38 ~~ia~Gvqf~wA~elsy~tPyl~~-lGvp------hk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR------RPf 104 (498)
T KOG0637|consen 38 ASIAAGVQFGWALELSYLTPYLQS-LGVP------HKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR------RPF 104 (498)
T ss_pred HHHHHHHHHHHHHHhccccHHHHH-cCCC------cccccccccccccccceecccccccccccccccccc------cch
Confidence 333444555555555555544433 2222 223466778889999999999999888776666544 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-ccCC-CccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHH-HHHHH
Q 044175 393 VGVGLVLSAVSMTIAGFVEVQRRNAF-NQMP-PKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTL-STSFT 469 (537)
Q Consensus 393 i~~g~~l~~~~~~~~~~~~~~~~~~~-~~~g-~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~-~~g~~ 469 (537)
+..+....++++++.++.......-. +... ..+..+...++++-+.=++......+.=++..+.+-.+.|.+ +.+.+
T Consensus 105 I~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f 184 (498)
T KOG0637|consen 105 ILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVF 184 (498)
T ss_pred HHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhH
Confidence 66677777888877776543221111 1100 112334444555555555555555666788888877777777 99999
Q ss_pred HHHHHHHHHHHHHHHH
Q 044175 470 FLSLSFGNFLSSVFVD 485 (537)
Q Consensus 470 ~~~~~~g~~~~~~l~~ 485 (537)
.++.++||.+|..+..
T Consensus 185 ~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 185 SFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHhcceeeeeccc
Confidence 9999999999887765
No 273
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.57 E-value=1 Score=49.21 Aligned_cols=81 Identities=16% Similarity=0.227 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHH-HHHHHHHhhHhHHHhhhc-cchhHHHHHHHHHHHH
Q 044175 17 CGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNL-MGSTFLLCLVGGFISDTF-LSRFATCLIFGTLEVL 94 (537)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~G~laD~~-~Gr~~~~~~~~~~~~i 94 (537)
....++...++...+.+..+++|-|+.+++|.+...+..+.... .-+.+++..+||++.-|+ +..|.+..+.++...+
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l 473 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVL 473 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHH
Confidence 34577888999999999999999999999999999999998664 556788999999999985 4566666666555444
Q ss_pred HHH
Q 044175 95 ALV 97 (537)
Q Consensus 95 ~~~ 97 (537)
..+
T Consensus 474 ~l~ 476 (735)
T KOG3626|consen 474 SLL 476 (735)
T ss_pred HHH
Confidence 443
No 274
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.72 E-value=8.8 Score=40.00 Aligned_cols=116 Identities=15% Similarity=0.087 Sum_probs=69.8
Q ss_pred HHHHHHHhhHhHHHh---hhccchhHHHHHHHHHHHHHHHHHHHHhhccc-cCCCCCCCCCccCCchhHHHHHHHHHHHH
Q 044175 61 MGSTFLLCLVGGFIS---DTFLSRFATCLIFGTLEVLALVMITVQAYSEK-LHPPDCGKSSCVKGGIAAYFYASLCLYAL 136 (537)
Q Consensus 61 ~~~~~~~~~~~G~la---D~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 136 (537)
..+..++..+.+.+. ++ +||++++.++..+..++.++.-+...... +.+. .+....-..+.....+.-++.|+
T Consensus 289 g~g~v~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t--~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRG-FGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPT--DSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhh-cccCcchhHHHHHHHHHHHHHhccccccCCCCCC--cccccccccchhHHHHHHHHHhh
Confidence 333444455555565 55 59999999999998888877666532111 0000 00000001234445555678999
Q ss_pred hcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 044175 137 GSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAI 186 (537)
Q Consensus 137 g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 186 (537)
+-+.........+++.+| ++ |..+++++-.-..++..++.+..
T Consensus 366 ~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999985 44 56666666555555555443333
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=88.27 E-value=23 Score=35.51 Aligned_cols=168 Identities=15% Similarity=0.073 Sum_probs=87.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCCchhhHHHHHHHHH-HHHHHHhhH----hHHHhhhc-cchhHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFK---NEMHFNLAGASNTLTNLM-GSTFLLCLV----GGFISDTF-LSRFATC 85 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~---~~l~~~~~~~~~~~~~~~-~~~~~~~~~----~G~laD~~-~Gr~~~~ 85 (537)
+....+++..++...+.--..+.+-.++. ++.|++....+.+..... ..+.+..+. +-+++|.. .|++.-+
T Consensus 119 ~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF 198 (354)
T PF05631_consen 119 SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPF 198 (354)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchH
Confidence 33445555556655555555554444443 235666665555554333 333444444 44556653 1456677
Q ss_pred HHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHH-HHHH--H-HHHHHhcccccccchhhcccCCCCCChh-h
Q 044175 86 LIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAY-FYAS--L-CLYALGSGGVRGALPALGAGQFDEKDPK-G 160 (537)
Q Consensus 86 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~ 160 (537)
..+..+.+++.++.... ..++.++++. +.+..+.-.-.. .+.. | .+.|+...+.......++-.+.|.-+++ +
T Consensus 199 ~~a~~~l~~~~~~I~~~-W~ENyg~~~~-~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~ 276 (354)
T PF05631_consen 199 DAAIVLLAVAAVLILKT-WPENYGDTSS-SSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDE 276 (354)
T ss_pred HHHHHHHHHHHHHHHhc-ccccCCCccc-ccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCC
Confidence 88877777776654322 1122222111 111100001111 1111 2 3467777777777788887777754432 1
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHH
Q 044175 161 AKALASYFNYFLLTTTLAAVIGVT 184 (537)
Q Consensus 161 ~~~r~~~~~~~~~~~~~g~~i~~~ 184 (537)
.-.-+-.++.+..+..+|+.+.+.
T Consensus 277 ~~P~GlIFssFM~a~MlGS~lf~~ 300 (354)
T PF05631_consen 277 ELPLGLIFSSFMVAMMLGSSLFSR 300 (354)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHH
Confidence 233677777777788888877653
No 276
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=86.34 E-value=1.1 Score=46.84 Aligned_cols=132 Identities=11% Similarity=-0.045 Sum_probs=79.8
Q ss_pred hhcC---CchhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH-hhcc-ccCCCCCCCCCc
Q 044175 44 NEMH---FNLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQ-AYSE-KLHPPDCGKSSC 118 (537)
Q Consensus 44 ~~l~---~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~-~~~~-~~~~~~~~~~~~ 118 (537)
+.++ +++...+.+..+..++..++..+....--++ .-|+++.++.++.++..+.-... ...+ .+ |.
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~-----Gi--- 315 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLLVTRWNLDL-----GI--- 315 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEEEEEEeeee-----Cc---
Confidence 3455 7887777777666666666666664443342 66777777776666554432211 1000 11 00
Q ss_pred cCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 044175 119 VKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEK 193 (537)
Q Consensus 119 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 193 (537)
++. ...+..-++..+..+...-....+++|..|+.. -++.+++.....|+|..++..++..+.+.+
T Consensus 316 --~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~ 381 (433)
T PF03092_consen 316 --PDQ-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELF 381 (433)
T ss_pred --CCe-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 011 222222234444444445555677899999877 688999999899999999988888776543
No 277
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.84 E-value=5.5 Score=38.04 Aligned_cols=140 Identities=12% Similarity=0.104 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHhhhccchhH---HHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHH
Q 044175 53 ASNTLTNLMGSTFLLCLVGGFISDTFLSRFA---TCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYA 129 (537)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~---~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (537)
-|.+.+.++.+..+++-+...+..|- |.| .+.+..++...... +.+.++. . +++ ..++..-++
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~-Lpilt~~--v---sP~------kes~~~s~i 349 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALL-LPILTSS--V---SPS------KESPSESLI 349 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHH-HHHHHhc--c---CCC------cCCchHHHH
Confidence 47888889988888888887777663 333 24444333333332 2222211 0 011 224555577
Q ss_pred HHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHH
Q 044175 130 SLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIG 209 (537)
Q Consensus 130 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~ 209 (537)
+.++.-.+.|..+|....+=.+..|++. |+..++++.+-.|+-.-++-..--.-....+-|..|.++......+
T Consensus 350 ~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a 423 (454)
T KOG4332|consen 350 GFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVA 423 (454)
T ss_pred HHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHH
Confidence 8888889999999999999888889887 8999999887666544332211100011235677888877766655
Q ss_pred HHH
Q 044175 210 FIA 212 (537)
Q Consensus 210 ~~~ 212 (537)
.+.
T Consensus 424 ~i~ 426 (454)
T KOG4332|consen 424 SIL 426 (454)
T ss_pred HHH
Confidence 443
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.64 E-value=3.7 Score=42.76 Aligned_cols=156 Identities=10% Similarity=-0.024 Sum_probs=79.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cCCchh-hHHHHHHHHHHHHHHHhhHhHHHhhhccchh-HHHHHHHHH
Q 044175 15 RACGFIFVLSSLENMGFIANAISMVLYFKNE-MHFNLA-GASNTLTNLMGSTFLLCLVGGFISDTFLSRF-ATCLIFGTL 91 (537)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-l~~~~~-~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~-~~~~~~~~~ 91 (537)
|.+|...+..++..+....+.+......+.+ .+.++. ..-.+...|.++-.+|..+..+..= -++| +.+.+..++
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~~--p~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFMW--PDEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeEe--eCCCccchHHHHHH
Confidence 3455555544444443333333322222222 122222 3345556677777777775554311 1222 234444444
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCcc-CCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 92 EVLALVMITVQAYSEKLHPPDCGKSSCV-KGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 92 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
-.+-..+..+....+..+ .+ --.+-+..++..++.|+..|-..+....+..+..++++ |..+-.+
T Consensus 347 R~iFIPlf~lcn~~~~~~--------~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~ 412 (437)
T TIGR00939 347 RVLFIPLFLLCNYPQRSR--------LPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGAL 412 (437)
T ss_pred HHHHHHHHHHhcCCcccc--------CCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHH
Confidence 444333333332211000 00 01234566777889999999999998888888866544 5555555
Q ss_pred HHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAI 186 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~ 186 (537)
...+.++|-.+|..++
T Consensus 413 ~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 413 MVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5556666666665443
No 279
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=82.90 E-value=11 Score=38.51 Aligned_cols=61 Identities=7% Similarity=-0.081 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhh
Q 044175 123 IAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYV 189 (537)
Q Consensus 123 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l 189 (537)
+.+..++..+..|+..|..+.+....+.|..++++ |.-+++...++-++|..++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 55666667788999999999999999999877665 88889988888888888887776554
No 280
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=80.54 E-value=8.8 Score=38.21 Aligned_cols=99 Identities=10% Similarity=0.062 Sum_probs=59.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCC
Q 044175 426 ISLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGT 505 (537)
Q Consensus 426 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~ 505 (537)
-++|+....|++...-.++..+....-+++...++.-|...|++.+..- ++=..++.++.+..+- =++-
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~-------~L~i- 392 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGL-------GLDI- 392 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH---HHHHhheEEEEccccc-------CCCc-
Confidence 4678888889998887777777766666667778888888888776433 3322333333322211 0000
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 044175 506 DINKNNANLFYWFLAILSVLNFVLYLYAAA 535 (537)
Q Consensus 506 ~l~~~~~~~~f~~~~~l~~~~~v~~~~~~~ 535 (537)
.-.-.-+..+|.+++++.++.....+..-+
T Consensus 393 r~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~ 422 (433)
T KOG3810|consen 393 RTQFVVYSSYFIVLGVIFLIGFGIEYLMCR 422 (433)
T ss_pred ceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence 001123556788899888888766554433
No 281
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=76.98 E-value=33 Score=33.99 Aligned_cols=71 Identities=7% Similarity=-0.097 Sum_probs=47.7
Q ss_pred HHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhccccc
Q 044175 63 STFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVR 142 (537)
Q Consensus 63 ~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~ 142 (537)
.....+++.+.+..+ +|-|.++.++...+..-.. .... .++-.++.+-+..|.|.+.++
T Consensus 70 ~l~~s~m~~~~~Ir~-~g~K~tm~lav~~Y~lyiA----~Nl~----------------pr~~tlVPa~~~~G~aa~p~W 128 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRF-LGTKWTMVLAVFPYALYIA----ANLE----------------PRYETLVPAGLVLGMAAGPIW 128 (390)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHH----hhcc----------------hhHHhhccHHHhhcccccccc
Confidence 334455555577888 5999999887665543322 2111 244556677788999999999
Q ss_pred ccchhhcccCCC
Q 044175 143 GALPALGAGQFD 154 (537)
Q Consensus 143 ~~~~~~~~~~~~ 154 (537)
..-.+++++.-.
T Consensus 129 ~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 129 ASKGTYLTPMGQ 140 (390)
T ss_pred ccCcceecHHHH
Confidence 998888887644
No 282
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=73.37 E-value=76 Score=30.37 Aligned_cols=58 Identities=16% Similarity=0.117 Sum_probs=32.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHH--HHh-hhc--ccccchHHHHHHHHHHHHHHHHHHhcccccc
Q 044175 164 LASYFNYFLLTTTLAAVIGVT--AIV-YVS--TEKAWWGGFLISSIVTFIGFIALVIGKPFYR 221 (537)
Q Consensus 164 r~~~~~~~~~~~~~g~~i~~~--~~~-~l~--~~~g~~~~f~i~~~~~~~~~~~~~~~~~~~~ 221 (537)
|+.......+..++|++++-. +.+ -.. ....|+..+.+.+++.++-+++.....++..
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd 66 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFD 66 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 444444444567788766532 222 111 1235998888777776666666655555443
No 283
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=69.00 E-value=1.6e+02 Score=31.09 Aligned_cols=44 Identities=7% Similarity=-0.067 Sum_probs=38.8
Q ss_pred HhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044175 445 TLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 445 ~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~ 488 (537)
.+...|.++.|....++-.+..++.....++|.++++.+...+.
T Consensus 146 vS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 146 LSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477999999999999999999999999999999998877655
No 284
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=58.38 E-value=14 Score=35.13 Aligned_cols=79 Identities=10% Similarity=0.048 Sum_probs=54.3
Q ss_pred ccccchhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHH--------
Q 044175 3 DKVATIKQKGGFRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFI-------- 74 (537)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~l-------- 74 (537)
|.|..+. .++++.+. --+.-+.+-.....+.+++..|++ +.|.++.+.+.++.+....-++..++.|..
T Consensus 7 eDPstkP-igr~svf~-yGvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~ 83 (412)
T KOG4830|consen 7 EDPSTKP-IGRTSVFA-YGVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPA 83 (412)
T ss_pred CCCCCCc-ccceeeee-echhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHH
Confidence 4453322 34555433 233344555555667788888986 578888888888888999999999999754
Q ss_pred -hhhccchhHHH
Q 044175 75 -SDTFLSRFATC 85 (537)
Q Consensus 75 -aD~~~Gr~~~~ 85 (537)
-|| +|||+..
T Consensus 84 ~idr-~G~~~~w 94 (412)
T KOG4830|consen 84 CIDR-IGRRMSW 94 (412)
T ss_pred Hhhh-hcceeee
Confidence 578 4999754
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=57.89 E-value=1.4e+02 Score=27.89 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhhccCc-chhHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 044175 428 LFWLSFQYCIFGIADMFTLVGLLEFFYKEAPA-GMRTLSTSFTFL-SLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 428 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~~g~~~~~~l~~~i~ 488 (537)
.+.+.......|++.+...+....+..+..|+ +.|+...+.... ...++..+++.+...+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555657888888999999999999998 678888888888 56777777775555444
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=57.47 E-value=2.4e+02 Score=29.16 Aligned_cols=61 Identities=20% Similarity=0.306 Sum_probs=47.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044175 427 SLFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVFVDIIN 488 (537)
Q Consensus 427 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l~~~i~ 488 (537)
+..++-...++.|++... -.+-++|++...|++.--++.+......-+|..++..+..++.
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666777776444 4666799999999998889999888888888888888888665
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.90 E-value=48 Score=26.73 Aligned_cols=39 Identities=23% Similarity=0.069 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHH
Q 044175 55 NTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEV 93 (537)
Q Consensus 55 ~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 93 (537)
.-++.-.+...+.....||+-|||+|-++--++..++..
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 344455666777777889999999898876666544433
No 288
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=54.56 E-value=2.9e+02 Score=29.34 Aligned_cols=56 Identities=9% Similarity=0.167 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhhccCcchhHHHHHHHHHHHHHHHHHHHHH
Q 044175 428 LFWLSFQYCIFGIADMFTLVGLLEFFYKEAPAGMRTLSTSFTFLSLSFGNFLSSVF 483 (537)
Q Consensus 428 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~~g~~~~~~l 483 (537)
...++..+++..+..-..+++..+|-++++.+..-|++|-+.|...++|+-.-..+
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~ 460 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTF 460 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHH
Confidence 44466678888888888899999999999999999999999999999998774443
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=52.96 E-value=3e+02 Score=29.05 Aligned_cols=164 Identities=10% Similarity=0.066 Sum_probs=99.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCc---hhhHHHHHHHHHH-HHHHHhhHhHHHhhhccchhHHHHHHH
Q 044175 14 FRACGFIFVLSSLENMGFIANAISMVLYFKNEMHFN---LAGASNTLTNLMG-STFLLCLVGGFISDTFLSRFATCLIFG 89 (537)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~---~~~~~~~~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~~~~ 89 (537)
++.+.-+.++-+|-.+.|+.+. -+++.+.++ +.....+-+.... ++.+..++-+++.+++ -|.+++..-+
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHH
Confidence 3456666666666666654333 234555443 4445666666666 6778888999999995 9999999988
Q ss_pred HHHHHHHHHHHHHhh-ccccCCCCC--CC---CCccC----------CchhHHHHHHHHHHHHhcccccc-cchhhcccC
Q 044175 90 TLEVLALVMITVQAY-SEKLHPPDC--GK---SSCVK----------GGIAAYFYASLCLYALGSGGVRG-ALPALGAGQ 152 (537)
Q Consensus 90 ~~~~i~~~l~~~~~~-~~~~~~~~~--~~---~~~~~----------~~~~~~~~~~~~l~g~g~g~~~~-~~~~~~~~~ 152 (537)
..+....+++++.-. ..+..+|+. -+ ++-|+ ..+...+++.-=+.| ..+.. .-..+..|+
T Consensus 100 ~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg---slV~S~lFw~faNei 176 (509)
T COG3202 100 GFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG---SLVLSLLFWQFANEI 176 (509)
T ss_pred HHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH---HHHHHHHHHHHHHHh
Confidence 888777777776532 122333321 00 11110 012222222211111 11111 234667788
Q ss_pred CCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 044175 153 FDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTE 192 (537)
Q Consensus 153 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~ 192 (537)
...++ -.|.+..++...|++..++..+..++..+
T Consensus 177 tt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 177 TTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred hhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 87666 67899999999999999998888887653
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=52.17 E-value=43 Score=34.25 Aligned_cols=106 Identities=8% Similarity=0.031 Sum_probs=64.0
Q ss_pred HHHHHhhhhc--CC-chhhHHHHHHH-HHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhh--ccccCC
Q 044175 37 SMVLYFKNEM--HF-NLAGASNTLTN-LMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAY--SEKLHP 110 (537)
Q Consensus 37 ~~~~yl~~~l--~~-~~~~~~~~~~~-~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~--~~~~~~ 110 (537)
..|.++.+.- +. +..-.-.+... +.+...+|.+...++-++ +||+.....+ +-.+-..+..+... .+-..
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~-lR~lfiPlF~~cn~~~~~v~~- 340 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVL-LRLLFIPLFLLCNYPPLPVVF- 340 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHH-HHHHHHHHHHHhccCCCCcee-
Confidence 5555554322 11 23333444455 788888888888888776 5555554443 33333333333321 11111
Q ss_pred CCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCC
Q 044175 111 PDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKD 157 (537)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 157 (537)
.+-+++++...+.|+..|=.......+..++.++++
T Consensus 341 -----------~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 341 -----------ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred -----------cCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 244677788889999999999999999888887666
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=47.46 E-value=1.1e+02 Score=33.15 Aligned_cols=131 Identities=15% Similarity=0.193 Sum_probs=81.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-----cC-----CCccchHHHHHHHHHHHHHHHHHHhhhhHHHhhhcc
Q 044175 388 TQLQRVGVGLVLSAVSMTIAGFVEVQRRNAFN-----QM-----PPKQISLFWLSFQYCIFGIADMFTLVGLLEFFYKEA 457 (537)
Q Consensus 388 ~~~~~i~~g~~l~~~~~~~~~~~~~~~~~~~~-----~~-----g~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~ 457 (537)
++.+.+.++.++..+++.+............. .+ .++......+...+-+.++|.+..-|...++-.+++
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 44566777777777776655544333221110 11 111223445566677778888899999999999999
Q ss_pred Cc----chhH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCccCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 044175 458 PA----GMRT--LSTSFTFLSLSFGNFLSSVFVDIINAVTKRITPSKQGWLHGTDINKNNANLFYWFLAILSVLNFVLYL 531 (537)
Q Consensus 458 P~----~~rg--~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~l~~~~~~~~f~~~~~l~~~~~v~~~ 531 (537)
++ +.+. .....+.+..++|..++..+...+.+ ..+|... |.+.++..++++++++
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~--------~~~w~lg-----------f~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD--------NVGWKLG-----------FGIPTVLNALAILIFL 242 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh--------cccceee-----------ccHHHHHHHHHHHHHH
Confidence 82 2223 56777788888888887766655431 1245443 7788888888887776
Q ss_pred hhcccC
Q 044175 532 YAAAWY 537 (537)
Q Consensus 532 ~~~~~y 537 (537)
.-.+.|
T Consensus 243 ~g~~~y 248 (571)
T KOG1237|consen 243 PGFPFY 248 (571)
T ss_pred cCceeE
Confidence 655543
No 292
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=44.66 E-value=1e+02 Score=21.31 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHH
Q 044175 59 NLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVL 94 (537)
Q Consensus 59 ~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i 94 (537)
.......+.....|+..|+++|.++...+..++..+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 345556667777888888888986666555444333
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=42.33 E-value=7.1 Score=38.61 Aligned_cols=117 Identities=9% Similarity=0.016 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHHhhcccc-CCCCCCCCCccCCchhHHHHHHHHH
Q 044175 55 NTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQAYSEKL-HPPDCGKSSCVKGGIAAYFYASLCL 133 (537)
Q Consensus 55 ~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 133 (537)
.+...|.++-.+|..+.++.-=+. -++|.+.+..++-.+-..+..+....|.. ..|.. -.+-++.++..++
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~-------~~~d~~~~i~~~l 257 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPG-PSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVL-------FNSDAWFIILMLL 257 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecc-cccccHHHHHHHHHHHHHHHHHHHhhcccccCCCc-------ccchHHHHHHHHH
Confidence 345568888888888888752110 12333333334333333333332211110 00000 0133566777889
Q ss_pred HHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Q 044175 134 YALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTA 185 (537)
Q Consensus 134 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 185 (537)
.|+..|-..+....+..+..++++ |..+-.+...+.++|-.+|..+
T Consensus 258 ~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 258 FGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---------HHHH---------------------------------------
T ss_pred HHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888887655 4444444444555665555443
No 294
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=40.81 E-value=1.7e+02 Score=23.70 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=42.1
Q ss_pred chhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 044175 49 NLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITV 101 (537)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~ 101 (537)
.++..|-+...|.......+++.+|..|+. -+-+-=.++..++.+|.....+
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 346678888999999999999999999995 7777778888888877765544
No 295
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=36.64 E-value=1.3e+02 Score=30.23 Aligned_cols=121 Identities=12% Similarity=0.052 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCC--chhhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHHH
Q 044175 25 SLENMGFIANAISMVLYFKNEMHF--NLAGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITVQ 102 (537)
Q Consensus 25 ~~~~~~~~~~~~~~~~yl~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~~ 102 (537)
.+.+.+||-+..+....-++ ..- ...--|..=.+..+.++++.+..|++--.+ .|..-++++..-...+..+..++
T Consensus 244 Al~scg~~QV~nY~Q~LW~~-~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~ 321 (433)
T KOG3810|consen 244 ALASCGYYQVTNYTQILWKE-VAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMA 321 (433)
T ss_pred HHhhchhHHHHHHHHHHHHh-hCCCchhhhcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhh
Confidence 34566777777655544332 221 111225555667888889999999997774 77656555555444444444444
Q ss_pred hhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHH
Q 044175 103 AYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNY 170 (537)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 170 (537)
. .++.+..+++.++.........+....-+++-...+. -+-.||+
T Consensus 322 ~-----------------t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gLvFGi 366 (433)
T KOG3810|consen 322 Q-----------------TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGLVFGI 366 (433)
T ss_pred c-----------------ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------heeeeeh
Confidence 3 2467888888888777777777777777777666554 4555655
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=36.14 E-value=1.8e+02 Score=29.73 Aligned_cols=164 Identities=13% Similarity=-0.008 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHHHHHHHHHhhHhHHHhhhc-----cchhHHHHHHHHHHHH
Q 044175 20 IFVLSSLENMGFIANAISMVLYFKNEMHFNLAGASNTLTNLMGSTFLLCLVGGFISDTF-----LSRFATCLIFGTLEVL 94 (537)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~yl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~G~laD~~-----~Gr~~~~~~~~~~~~i 94 (537)
+.++.+..-+++-+.-...++-+. +.|++..+.+.+.....-...+.+...|..+... +=|+--+.+.... +
T Consensus 270 la~i~lt~K~gf~a~da~t~LkLl-e~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~--~ 346 (510)
T KOG3574|consen 270 LAGILLTGKLGFQAADALTSLKLL-EHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGL--V 346 (510)
T ss_pred HHHHHHHHHHHhhhhhhccchHHH-HcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHH--H
Confidence 444444444554444444444443 6799998888776444444444455555443321 1122112222222 2
Q ss_pred HHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHH
Q 044175 95 ALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLT 174 (537)
Q Consensus 95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 174 (537)
...+.... +.++.++..-. ...+...+....+.+...-.+.....++.+++.+++- -++-+++.+..
T Consensus 347 ~t~Lv~~~---~~~~~~~G~~~----~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTL 413 (510)
T KOG3574|consen 347 QTALVWWT---PTLGHSDGTFP----RGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTL 413 (510)
T ss_pred HHHHHhhh---cccccCCCcee----echHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHH
Confidence 22222222 22222110000 1122222222333333333445566778888888776 68889998889
Q ss_pred HHHHHHHHHHHHhhhcccccchHHH
Q 044175 175 TTLAAVIGVTAIVYVSTEKAWWGGF 199 (537)
Q Consensus 175 ~~~g~~i~~~~~~~l~~~~g~~~~f 199 (537)
.|+|+..-..+..++.+..++...+
T Consensus 414 snLGg~wp~tv~l~l~D~ltv~~C~ 438 (510)
T KOG3574|consen 414 SNLGGNWPGTVALWLADGLTVKQCV 438 (510)
T ss_pred HHhcCCcHHHHHHHhcccCceeecc
Confidence 9999988888888888877776543
No 297
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.55 E-value=3.6e+02 Score=30.17 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=36.0
Q ss_pred HhHHHhh---hccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhccc
Q 044175 70 VGGFISD---TFLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGG 140 (537)
Q Consensus 70 ~~G~laD---~~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 140 (537)
+.+-++| ++-||.|-+.++.++++++++...+.. ...+++..+.++.+++.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~------------------~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF------------------PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh------------------cchHHHHHHHHHHHHHHHH
Confidence 3344544 444778999999999999888777664 2556677777666666444
No 298
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=29.07 E-value=4.2e+02 Score=29.59 Aligned_cols=52 Identities=13% Similarity=0.094 Sum_probs=35.6
Q ss_pred HHHhhh---ccchhHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCccCCchhHHHHHHHHHHHHhcccc
Q 044175 72 GFISDT---FLSRFATCLIFGTLEVLALVMITVQAYSEKLHPPDCGKSSCVKGGIAAYFYASLCLYALGSGGV 141 (537)
Q Consensus 72 G~laD~---~~Gr~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 141 (537)
+-++|. +-||.|-+.++.+.++++++...+.. ..++++..+..+.+++.++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~------------------~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLF------------------GKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHh------------------cCcHHHHHHHHHHHHHHHHH
Confidence 555554 44788888888888888888766653 35567777777766665443
No 299
>PRK02237 hypothetical protein; Provisional
Probab=26.39 E-value=3.6e+02 Score=21.95 Aligned_cols=50 Identities=12% Similarity=0.004 Sum_probs=40.3
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHhhhccchhHHHHHHHHHHHHHHHHHHH
Q 044175 51 AGASNTLTNLMGSTFLLCLVGGFISDTFLSRFATCLIFGTLEVLALVMITV 101 (537)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~i~~~l~~~ 101 (537)
++.|-+...|...+.+.+++.+|..|+. -+-+-=.++..++.+|..+..+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhee
Confidence 4578888999999999999999999995 7777777787777777655443
No 300
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=25.15 E-value=1.9e+02 Score=21.76 Aligned_cols=41 Identities=15% Similarity=0.271 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 044175 171 FLLTTTLAAVIGVTAIVYVSTEKAWWGGFLISSIVTFIGFIALV 214 (537)
Q Consensus 171 ~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i~~~~~~~~~~~~~ 214 (537)
......++++++ ++.|++.++ .+..+++.++..++++++..
T Consensus 13 ~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~v 53 (76)
T PF06645_consen 13 MQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVV 53 (76)
T ss_pred HHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhhee
Confidence 333555666665 455566554 45555554444444444433
No 301
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=24.52 E-value=8.7e+02 Score=25.80 Aligned_cols=63 Identities=13% Similarity=0.163 Sum_probs=44.3
Q ss_pred HHHhcccccccchhhcccCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHH
Q 044175 134 YALGSGGVRGALPALGAGQFDEKDPKGAKALASYFNYFLLTTTLAAVIGVTAIVYVSTEKAWWGGFLI 201 (537)
Q Consensus 134 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~l~~~~g~~~~f~i 201 (537)
.|+..-.....--..+.+++|++++ ....++-+....++-..+-..+++.+.+..||+..-.+
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Ali 354 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALI 354 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5555556666666777888886542 66777777666666666666778888888999987655
Done!