BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044177
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1K0E|A Chain A, The Crystal Structure Of Aminodeoxychorismate Synthase
From Formate Grown Crystals
pdb|1K0E|B Chain B, The Crystal Structure Of Aminodeoxychorismate Synthase
From Formate Grown Crystals
pdb|1K0G|A Chain A, The Crystal Structure Of Aminodeoxychorismate Synthase
From Phosphate Grown Crystals
pdb|1K0G|B Chain B, The Crystal Structure Of Aminodeoxychorismate Synthase
From Phosphate Grown Crystals
Length = 453
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 163/305 (53%), Gaps = 23/305 (7%)
Query: 88 PDACFFFADNVVVIDHLYDDVYILSLNEENTPMSTWLDDTEQKLIGLRASSTRQLEEQNL 147
PD D +++DH V +LS N+ N WL+ ++Q Q
Sbjct: 132 PDMAVGIYDWALIVDHQRHTVSLLSHNDVNA-RRAWLE-------------SQQFSPQED 177
Query: 148 HAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYL 207
T S + S ++R Y +Y+ G+ Y++ L + D +L
Sbjct: 178 FTLT-----SDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRFHATYSG-DEWQAFL 231
Query: 208 HLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQ 267
L + N AP++A+L E I SPERF+ D N ++ +PIKGT+ R P+ED +
Sbjct: 232 QLNQANRAPFSAFLRL--EQGAILSLSPERFILCD-NSEIQTRPIKGTLPRLPDPQEDSK 288
Query: 268 LKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESYATVHTMVSTICGKK 327
++L S KD+AENLMIVDL+RND+GRV GSV VP L VE + VH +VSTI +
Sbjct: 289 QAVKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPFPAVHHLVSTITAQL 348
Query: 328 HSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYNRTFDLNIV 387
+ A + +RAAFPGGS+TGAPK+R+MEI++ +E R + GSIGY S+ D +I
Sbjct: 349 PEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCGSIGYLSFCGNMDTSIT 408
Query: 388 IRTVV 392
IRT+
Sbjct: 409 IRTLT 413
>pdb|3H9M|A Chain A, Crystal Structure Of Para-Aminobenzoate Synthetase,
Component I From Cytophaga Hutchinsonii
Length = 436
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 161/307 (52%), Gaps = 7/307 (2%)
Query: 119 PMSTWLDDTEQKLIGLRASSTRQLEEQNLHAPTVSRNKSAFISEV-SRGDYVNNVENCLK 177
P W + LI + S+ E Q+ T + F+ +V S+ Y N + +
Sbjct: 115 PEHVWEIQPDGILIHKGSGSSLVTEIQHAEPSTPVQQSDIFVKQVVSKESYFNAFDELQQ 174
Query: 178 YIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPER 237
I G++YE+ + G I Y L +K P P++ + F+ E I +SPER
Sbjct: 175 IIAQGDAYEINYCIPFTAK-GNISPAATYQRLNKKTPXPFSVYYKFNTE--YILSASPER 231
Query: 238 FLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVC 297
F++ D + ++PIKGT RG + EDE LK QL SEK+Q+EN IVDL+RNDL R
Sbjct: 232 FIK-KTGDTIISQPIKGTSKRGKSKAEDEXLKQQLGTSEKEQSENTXIVDLVRNDLSRTA 290
Query: 298 EPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEI 357
GSV VP L + ++ VH ++ST+ S+++ ++ AFP GS TGAPK+ +
Sbjct: 291 VAGSVCVPELSGLYTFPNVHQLISTVQSTIDPACSSIDVIQQAFPXGSXTGAPKVNVXKF 350
Query: 358 LESIESCSRGIYSGSIGYFSYNRTFDLNIVIRTVVIHXXXXXXXXXXXXXXLS--NPEDE 415
++ IES +RG +SG++GY + FD N++IR++ + S E E
Sbjct: 351 IDRIESXARGPFSGTVGYXDPHDNFDFNVLIRSIFYNSATQELFXEAGSAITSYAKAETE 410
Query: 416 YEEMILK 422
YEE +LK
Sbjct: 411 YEECLLK 417
>pdb|1QDL|A Chain A, The Crystal Structure Of Anthranilate Synthase From
Sulfolobus Solfataricus
Length = 422
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 180/343 (52%), Gaps = 32/343 (9%)
Query: 88 PDACFFFADNVVVIDHLYDDVYILSLNEENTPMSTWLDDTEQKLIGLRASSTRQLEEQNL 147
P A FF DN+++ DH VY+ N + + + D E K+
Sbjct: 109 PYAEFFTPDNIIIYDHNEGKVYV---NADLSSVGGCGDIGEFKV---------------- 149
Query: 148 HAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYL 207
S + +++ Y V L+YI+ G +++ L+ + + I D L +Y
Sbjct: 150 ---------SFYDESLNKNSYERIVSESLEYIRSGYIFQVVLS-RFYRYIFSGDPLRIYY 199
Query: 208 HLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQ 267
+LR NP+PY +L F ++ L SSPE R+ N ++E PI GT RG+ EED +
Sbjct: 200 NLRRINPSPYMFYLKFDEKYLI--GSSPELLFRVQDN-IVETYPIAGTRPRGADQEEDLK 256
Query: 268 LKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESYATVHTMVSTICGKK 327
L+L+L SEKD+AE+LM+VDL RNDLG+VC PG+V VP LM VE Y+ V +VS + G
Sbjct: 257 LELELMNSEKDKAEHLMLVDLARNDLGKVCVPGTVKVPELMYVEKYSHVQHIVSKVIGTL 316
Query: 328 HSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYNRTFDLNIV 387
+A+N + A FP G+++GAPK +M I+E++E RG Y+G++G+ S + + I
Sbjct: 317 KKKYNALNVLSATFPAGTVSGAPKPMAMNIIETLEEYKRGPYAGAVGFISADGNAEFAIA 376
Query: 388 IRTVVIHXXXXXXXXXXXXXXLSNPEDEYEEMILKSSAPAKAV 430
IRT ++ SNPE EY E K A A+
Sbjct: 377 IRTAFLNKELLRIHAGAGIVYDSNPESEYFETEHKLKALKTAI 419
>pdb|4GRH|A Chain A, Crystal Structure Of Pabb Of Stenotrophomonas Maltophilia
Length = 457
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 144/265 (54%), Gaps = 7/265 (2%)
Query: 168 YVNNVENCLKYIKDGESYELCLTTQLRKRIG-EIDSLGLYLHLREKNPAPYAAWLSFSKE 226
+ + V ++Y++ G+ +++ L+ + + + LY LR NPAP+A FS
Sbjct: 194 FTDGVRRVIEYLRAGDVFQVNLSRRWNAQFAAPVSPQALYAQLRRANPAPFAGL--FSAH 251
Query: 227 DLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQ-LQYSEKDQAENLMI 285
+ SSPER + + + +PI GT R +D+ ++Q L K++AE++M+
Sbjct: 252 GRHVVSSSPERLVSVHAGHA-QTRPIAGTRPRFEG--DDDAARIQELVGHPKERAEHVML 308
Query: 286 VDLLRNDLGRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGS 345
+DL RNDLGR+C PG+V V LM VESYA VH +VS + G V+ + A FPGG+
Sbjct: 309 IDLERNDLGRICLPGTVVVDELMTVESYAHVHHIVSNVSGHLRPEVTPGEVIAATFPGGT 368
Query: 346 MTGAPKLRSMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRTVVIHXXXXXXXXXXX 405
+TG PK+R M+I+ +E RG Y+G+ G+ + + DLNI+IRT +
Sbjct: 369 ITGCPKVRCMQIISELEQVPRGAYTGAFGWLNRDGDLDLNILIRTAEVDGHEVSFRTGAG 428
Query: 406 XXXLSNPEDEYEEMILKSSAPAKAV 430
S+P+ E +E K+ +A+
Sbjct: 429 IVVDSDPDKELDETRAKARGLLRAL 453
>pdb|1I1Q|A Chain A, Structure Of The Cooperative Allosteric Anthranilate
Synthase From Salmonella Typhimurium
Length = 520
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 17/350 (4%)
Query: 88 PDACFFFADNVVVIDHLYDDVYILSLNEENTPMSTWLDDTEQKLIGLRASSTRQLEEQNL 147
PD CF+ A+ ++VIDH I + T D +Q+L A ++QL +
Sbjct: 171 PDYCFYLAETLMVIDHQKKSTRI------QASLFTASDREKQRLNARLAYLSQQLTQPAP 224
Query: 148 HAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYL 207
P S + V K I+ GE +++ + R + L Y
Sbjct: 225 PLPVTPVPDMRCECNQSDDAFGAVVRQLQKAIRAGEIFQVVPSR--RFSLPCPSPLAAYY 282
Query: 208 HLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDK-NDLLEAKPIKGTIARGSTPEE-- 264
L++ NP+PY ++ D + +SPE L+ D + +E PI GT RG +
Sbjct: 283 VLKKSNPSPYMFFMQ--DNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTL 340
Query: 265 ----DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESYATVHTMV 320
D +++L ++ K+ +E+LM+VDL RNDL R+C PGS +V +L V+ Y+ V +V
Sbjct: 341 DRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLV 400
Query: 321 STICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYNR 380
S + G+ ++ A++ RA G+++GAPK+R+M+++ E RG Y G++GYF+ +
Sbjct: 401 SRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGGAVGYFTAHG 460
Query: 381 TFDLNIVIRTVVIHXXXXXXXXXXXXXXLSNPEDEYEEMILKSSAPAKAV 430
D IVIR+ ++ S P+ E +E K+ A +A+
Sbjct: 461 DLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAI 510
>pdb|1I7Q|A Chain A, Anthranilate Synthase From S. Marcescens
pdb|1I7Q|C Chain C, Anthranilate Synthase From S. Marcescens
pdb|1I7S|A Chain A, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
pdb|1I7S|C Chain C, Anthranilate Synthase From Serratia Marcescens In Complex
With Its End Product Inhibitor L-Tryptophan
Length = 519
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 19/357 (5%)
Query: 82 HHKSRTPDACFFFADNVVVIDHLYDDVYI-LSLNEENTPMSTWLDDTEQKLIGLRASSTR 140
R PD CF+ A+ ++V+DH + S+ E + L ++L +
Sbjct: 164 RQDQRCPDFCFYLAETLLVLDHQRGSARLQASVFSEQASEAQRLQHRLEQLQAELQQPPQ 223
Query: 141 QLEEQNLHAPTVSRNKSAFISEVSRGDYVNNVENCLKYIKDGESYELCLTTQLRKRIGEI 200
+ Q L +S N+S +Y V + I+ GE +++ + R +
Sbjct: 224 PIPHQKLENMQLSCNQSD-------EEYGAVVSELQEAIRQGEIFQVVPSR--RFSLPCP 274
Query: 201 DSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDK-NDLLEAKPIKGTIARG 259
LG Y L++ NP+PY ++ +D + +SPE L+ D N +E PI GT RG
Sbjct: 275 APLGPYQTLKDNNPSPYMFFMQ--DDDFTLFGASPESALKYDAGNRQIEIYPIAGTRPRG 332
Query: 260 STPEE------DEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESY 313
+ D +++L+++ K+ AE+LM+VDL RNDL R+C+ GS +V +L V+ Y
Sbjct: 333 RRADGSLDLDLDSRIELEMRTDHKELAEHLMLVDLARNDLARICQAGSRYVADLTKVDRY 392
Query: 314 ATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSI 373
+ V +VS + G +++ ++ +A G+++GAPK+R+M+++ ++ S RG Y G +
Sbjct: 393 SFVMHLVSRVVGTLRADLDVLHAYQACMNMGTLSGAPKVRAMQLIAALRSTRRGSYGGRV 452
Query: 374 GYFSYNRTFDLNIVIRTVVIHXXXXXXXXXXXXXXLSNPEDEYEEMILKSSAPAKAV 430
GYF+ R D IVIR+ + S PE E +E K+ A +A+
Sbjct: 453 GYFTAVRNLDTCIVIRSAYVEDGHRTVQAGAGVVQDSIPEREADETRNKARAVLRAI 509
>pdb|2FN0|A Chain A, Crystal Structure Of Yersinia Enterocolitica Salicylate
Synthase (Irp9)
pdb|2FN0|B Chain B, Crystal Structure Of Yersinia Enterocolitica Salicylate
Synthase (Irp9)
pdb|2FN1|A Chain A, Crystal Structures Of Yersinia Enterocolitica Salicylate
Synthase (Irp9) In Complex With The Reaction Products
Salicylate And Pyruvate
pdb|2FN1|B Chain B, Crystal Structures Of Yersinia Enterocolitica Salicylate
Synthase (Irp9) In Complex With The Reaction Products
Salicylate And Pyruvate
Length = 437
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 6/297 (2%)
Query: 136 ASSTRQLEEQNLHAPTVSRNKSAFISEVSRGD-YVNNVENCLKYIKDGESYELCLTTQLR 194
A R+L E A T ++N + G+ Y V + I+ GE Y + ++
Sbjct: 145 ADGCRRLCEWVKEASTTTQNAPLAVDTALNGEAYKQQVARAVAEIRRGE-YVKVIVSRAI 203
Query: 195 KRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKG 254
ID L+ R+ N P +++ F +E SPE + + N ++ +P+ G
Sbjct: 204 PLPSRIDMPATLLYGRQAN-TPVRSFM-FRQEGREALGFSPELVMSVTGNKVV-TEPLAG 260
Query: 255 TIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESYA 314
T R PE ++ + +L + K+ E+++ V +L VC PGSV V +LM V
Sbjct: 261 TRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRG 320
Query: 315 TVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIG 374
+V + S + G+ N A + FP + +G PK ++ + IE R +YSG+I
Sbjct: 321 SVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAIL 380
Query: 375 YFSYNRTFDLNIVIRTVVIHXXXXXXXXXXXXXXLSNPEDEYEEMILKSSAPAKAVM 431
R FD +V+R+V S PE E E K ++ A +M
Sbjct: 381 LLDDTR-FDAALVLRSVFQDSQRCWIQAGAGIIAQSTPERELTETREKLASIAPYLM 436
>pdb|2G5F|A Chain A, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|B Chain B, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|C Chain C, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|2G5F|D Chain D, The Structure Of Mbti From Mycobacterium Tuberculosis, The
First Enzyme In The Synthesis Of Mycobactin, Reveals It
To Be A Salicylate Synthase
pdb|3RV6|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Phenyl R-Group
pdb|3RV6|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Phenyl R-Group
pdb|3RV7|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV7|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Isopropyl R-Group
pdb|3RV9|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
pdb|3RV9|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Ethyl R-Group
Length = 450
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 234 SPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDL 293
SPE + + ++ +P+ GT A G P D + L+ + K+ E+ + V ++
Sbjct: 250 SPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEI 309
Query: 294 GRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLR 353
+ EPGS V + M V +V + STI + + + + A FP + +G PK
Sbjct: 310 TDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAA 369
Query: 354 SMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRT 390
+E + ++ C RG+YSG++ S + D + +R
Sbjct: 370 GVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRA 406
>pdb|3RV8|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3RV8|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor With Cyclopropyl R-Group
pdb|3ST6|A Chain A, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|B Chain B, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|C Chain C, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
pdb|3ST6|D Chain D, Structure Of A M. Tuberculosis Synthase, Mbti, In Complex
With An Isochorismate Analogue Inhibitor
Length = 450
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 234 SPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDL 293
SPE + + ++ +P+ GT A G P D + L+ + K+ E+ + V ++
Sbjct: 250 SPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEI 309
Query: 294 GRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLR 353
+ EPGS V + M V +V + STI + + + + A FP + +G PK
Sbjct: 310 TDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAA 369
Query: 354 SMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRT 390
+E + ++ C RG+YSG++ S + D + +R
Sbjct: 370 GVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRA 406
>pdb|2I6Y|A Chain A, Structure And Mechanism Of Mycobacterium Tuberculosis
Salicylate Synthase, Mbti
Length = 470
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 234 SPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDL 293
SPE + + ++ +P+ GT A G P D + L+ + K+ E+ + V ++
Sbjct: 270 SPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEI 329
Query: 294 GRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLR 353
+ EPGS V + M V +V + STI + + + + A FP + +G PK
Sbjct: 330 TDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAA 389
Query: 354 SMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRT 390
+E + ++ C RG+YSG++ S + D + +R
Sbjct: 390 GVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRA 426
>pdb|3LOG|A Chain A, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|B Chain B, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|C Chain C, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3LOG|D Chain D, Crystal Structure Of Mbti From Mycobacterium Tuberculosis
pdb|3VEH|A Chain A, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|B Chain B, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|C Chain C, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
pdb|3VEH|D Chain D, Structure Of A M. Tuberculosis Salicylate Synthase, Mbti,
In Complex With An Inhibitor Methylamt
Length = 451
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 234 SPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDL 293
SPE + + ++ +P+ GT A G P D + L+ + K+ E+ + V ++
Sbjct: 252 SPELVTAVRADGVVITEPLAGTRALGRGPAIDRLARDDLESNSKEIVEHAISVRSSLEEI 311
Query: 294 GRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLR 353
+ EPGS V + M V +V + STI + + + + A FP + +G PK
Sbjct: 312 TDIAEPGSAAVIDFMTVRERGSVQHLGSTIRARLDPSSDRMAALEALFPAVTASGIPKAA 371
Query: 354 SMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRT 390
+E + ++ C RG+YSG++ S + D + +R
Sbjct: 372 GVEAIFRLDECPRGLYSGAVVMLSADGGLDAALTLRA 408
>pdb|3GSE|A Chain A, Crystal Structure Of Menaquinone-specific Isochorismate
Synthase From Yersinia Pestis Co92
Length = 458
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 233 SSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSEKDQAENLMIVDLLRND 292
SSPER L L + LE + + GT++ + + L L + EK+Q ENL++VD
Sbjct: 258 SSPER-LYLRQQLHLETEALAGTVSNLDSDPQAAVLADWLMHDEKNQRENLLVVD----- 311
Query: 293 LGRVCE--PGSVHVPNLMDVE--SYATVHTMVSTICGKKHSNVSAVNCVRAAFPGGSMTG 348
+C+ G V ++M E V + IC + S S +C++ P ++ G
Sbjct: 312 --DICQRLQGGVTAVDVMPPEIIRLRKVQHLRRRICAQL-SRASDTDCLQRLQPTAAVAG 368
Query: 349 APKLRSMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRTVVIHXXXXXXXXXXXXXX 408
P+ + + + E SRG Y+GS GY S RT + ++ +R+ +
Sbjct: 369 LPREAARQFIAKHELFSRGWYAGSAGYLSLKRT-EFSVALRSARVDGQQIHLYAGAGIVA 427
Query: 409 LSNPEDEYEEMILKSSA 425
S+ E E++E+ KS+
Sbjct: 428 GSDAEQEWQEIDNKSAG 444
>pdb|2EUA|A Chain A, Structure And Mechanism Of Menf, The Menaquinone-Specific
Isochorismate Synthase From Escherichia Coli
pdb|2EUA|B Chain B, Structure And Mechanism Of Menf, The Menaquinone-Specific
Isochorismate Synthase From Escherichia Coli
pdb|3BZM|A Chain A, Crystal Structure Of Open Form Of Menaquinone-Specific
Isochorismate Synthase, Menf
pdb|3BZN|A Chain A, Crystal Structure Of Open Form Of Menaquinone-Specific
Isochorismate Synthase, Menf
Length = 431
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 7/209 (3%)
Query: 217 YAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGSTPEEDEQLKLQLQYSE 276
Y +++F E+ SSPER R ++ L + + GT+A ++ +QL L +
Sbjct: 222 YHFYMAFDGEN-AFLGSSPERLWR-RRDKALRTEALAGTVANNPDDKQAQQLGEWLMADD 279
Query: 277 KDQAENLMIVDLLRNDLGRVCEPGSVHVPNLMDVESYATVHTMVSTICGKKHSNVSAVNC 336
K+Q EN+++V+ + L + V P ++ + + + T K V C
Sbjct: 280 KNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADD----VIC 335
Query: 337 VRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYNRTFDLNIVIRTVVIHXX 396
+ P ++ G P+ + + + E +R Y+GS GY S ++ + + +R+ I
Sbjct: 336 LHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQS-EFCVSLRSAKISGN 394
Query: 397 XXXXXXXXXXXXLSNPEDEYEEMILKSSA 425
S+PE E++E+ K++
Sbjct: 395 VVRLYAGAGIVRGSDPEQEWQEIDNKAAG 423
>pdb|3HWO|A Chain A, Crystal Structure Of Escherichia Coli
Enterobactin-Specific Isochorismate Synthase Entc In
Complex With Isochorismate
pdb|3HWO|B Chain B, Crystal Structure Of Escherichia Coli
Enterobactin-Specific Isochorismate Synthase Entc In
Complex With Isochorismate
Length = 394
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 200 IDSLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARG 259
IDS L L +NP Y + + + + +SPE LR D + + P+ G+ R
Sbjct: 165 IDSGVLLERLIAQNPVSYNFHVPLADGGVLLG-ASPELLLRKD-GERFSSIPLAGSARRQ 222
Query: 260 STPEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLG-RVCEPGSVHVPNLMDVESYATVHT 318
D + +L SEKD+ E+ ++ ++ L R E +HVP+ + + T+
Sbjct: 223 PDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSE---LHVPSSPQLITTPTLWH 279
Query: 319 MVSTICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSY 378
+ + GK +S +A+ P +++G P + +++ +E R ++ G +G+
Sbjct: 280 LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWCDS 339
Query: 379 NRTFDLNIVIRTVVIHXXXXXXXXXXXXXXLSNPEDEYEEMILKSS 424
+ + IR + S+P E+ E +K S
Sbjct: 340 EGNGEWVVTIRCAKLRENQVRLFAGAGIVPASSPLGEWRETGVKLS 385
>pdb|3R75|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R75|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R76|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
pdb|3R76|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
Length = 645
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 13/197 (6%)
Query: 202 SLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGST 261
+L ++ L + Y ++ + E ++PER L L + PI GT +
Sbjct: 170 ALAVFKRLMRREVGAYWIFVIHTGER-TFVGATPERHLTLHEG-CATMNPISGTYRYPQS 227
Query: 262 PEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGS-VHVPNLMDVESYATVHTMV 320
+ + L K+ E M++D + R+C G V P+L ++ A HT
Sbjct: 228 GPTIDGINAFLG-DRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLA--HTEY 284
Query: 321 STICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYN- 379
+ H+ + +R ++TG+P + ++ E RG YSG +
Sbjct: 285 FIV---GHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDA 341
Query: 380 ---RTFDLNIVIRTVVI 393
RT D I+IRT I
Sbjct: 342 RGGRTLDSAILIRTAEI 358
>pdb|3R74|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
pdb|3R74|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
Length = 645
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 13/197 (6%)
Query: 202 SLGLYLHLREKNPAPYAAWLSFSKEDLCICCSSPERFLRLDKNDLLEAKPIKGTIARGST 261
+L ++ L + Y ++ + E + ++PER L L + PI GT +
Sbjct: 170 ALAVFKRLMRREVGAYWIFVIHTGERTFVG-ATPERHLTLHEG-CATMNPISGTYRYPQS 227
Query: 262 PEEDEQLKLQLQYSEKDQAENLMIVDLLRNDLGRVCEPGS-VHVPNLMDVESYATVHTMV 320
+ + L K+ E M++D + R+C G V P+L ++ A HT
Sbjct: 228 GPTIDGINAFLG-DRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLA--HTEY 284
Query: 321 STICGKKHSNVSAVNCVRAAFPGGSMTGAPKLRSMEILESIESCSRGIYSGSIGYFSYN- 379
+ H+ + +R ++TG+P + ++ E RG YSG +
Sbjct: 285 FIV---GHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDA 341
Query: 380 ---RTFDLNIVIRTVVI 393
RT D I+IRT I
Sbjct: 342 RGGRTLDSAILIRTAEI 358
>pdb|2HE3|A Chain A, Crystal Structure Of The Selenocysteine To Cysteine Mutant
Of Human Glutathionine Peroxidase 2 (Gpx2)
Length = 208
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 29/66 (43%)
Query: 172 VENCLKYIKDGESYELCLTTQLRKRIGEIDSLGLYLHLREKNPAPYAAWLSFSKEDLCIC 231
+ N LKY++ G Y+ T + + + ++ +L++K P PY S + I
Sbjct: 102 ILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKLII 161
Query: 232 CSSPER 237
S R
Sbjct: 162 WSPVRR 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,593,773
Number of Sequences: 62578
Number of extensions: 498503
Number of successful extensions: 1113
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1084
Number of HSP's gapped (non-prelim): 24
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)