Query 044178
Match_columns 366
No_of_seqs 162 out of 2396
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 21:18:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 3.3E-71 1.1E-75 522.8 30.8 328 34-366 7-475 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 2.9E-66 9.9E-71 490.9 31.5 330 33-366 4-478 (494)
3 3nxu_A Cytochrome P450 3A4; al 100.0 2.7E-66 9.2E-71 490.1 27.3 317 39-366 16-474 (485)
4 3ld6_A Lanosterol 14-alpha dem 100.0 1.2E-66 3.9E-71 489.4 23.6 322 35-366 9-453 (461)
5 3k9v_A 1,25-dihydroxyvitamin D 100.0 1E-65 3.6E-70 485.6 27.4 324 33-366 20-482 (482)
6 3pm0_A Cypib1, cytochrome P450 100.0 1.7E-65 5.8E-70 487.2 27.4 327 33-366 5-483 (507)
7 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2E-64 6.9E-69 476.1 32.6 325 33-364 6-471 (476)
8 3qz1_A Steroid 21-hydroxylase; 100.0 1.4E-64 4.6E-69 479.7 26.9 322 31-366 23-483 (496)
9 3s79_A Cytochrome P450 19A1; o 100.0 1.5E-64 5.2E-69 480.2 27.2 319 35-366 43-495 (503)
10 1po5_A Cytochrome P450 2B4; ox 100.0 1.3E-63 4.6E-68 470.4 30.5 325 35-366 8-472 (476)
11 2fdv_A Cytochrome P450 2A6; CY 100.0 3.1E-63 1.1E-67 467.9 29.7 326 34-366 7-472 (476)
12 1r9o_A Cytochrome P450 2C9; mo 100.0 3.2E-63 1.1E-67 468.0 27.2 325 35-366 9-473 (477)
13 2ve3_A Putative cytochrome P45 100.0 4.1E-63 1.4E-67 462.9 25.4 320 34-366 9-443 (444)
14 3n9y_A Cholesterol SIDE-chain 100.0 4.2E-63 1.4E-67 468.4 24.7 324 32-366 4-474 (487)
15 2hi4_A Cytochrome P450 1A2; CY 100.0 1.1E-62 3.9E-67 466.2 26.7 325 34-364 13-486 (495)
16 3czh_A Cytochrome P450 2R1; vi 100.0 3E-62 1E-66 461.6 27.9 326 34-365 9-476 (481)
17 3i3k_A Lanosterol 14-alpha dem 100.0 9.5E-63 3.3E-67 462.8 24.2 323 33-364 7-452 (461)
18 3dbg_A Putative cytochrome P45 100.0 3.5E-62 1.2E-66 459.7 21.8 315 36-366 22-461 (467)
19 2cib_A Cytochrome P450 51; hem 100.0 9.3E-62 3.2E-66 455.1 23.2 319 37-366 4-448 (455)
20 3gw9_A Sterol 14alpha-demethyl 100.0 2E-61 6.8E-66 452.4 23.9 312 36-366 2-449 (450)
21 3dax_A Cytochrome P450 7A1; ch 100.0 7E-61 2.4E-65 453.7 21.3 328 32-366 8-485 (491)
22 2ij2_A Cytochrome P450 BM3; mo 100.0 3.2E-60 1.1E-64 446.4 25.0 315 37-366 3-451 (470)
23 3mdm_A Cholesterol 24-hydroxyl 100.0 1.1E-59 3.8E-64 441.4 28.5 299 56-366 9-441 (456)
24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.2E-60 4.2E-65 451.9 20.6 327 31-364 7-483 (491)
25 3b6h_A Prostacyclin synthase; 100.0 1E-58 3.5E-63 439.6 22.8 325 33-366 14-489 (498)
26 3b98_A Prostaglandin I2 syntha 100.0 1.2E-58 4E-63 436.7 20.6 321 33-366 14-470 (475)
27 2cd8_A Cytochrome P450 monooxy 100.0 4.5E-55 1.5E-59 406.9 22.2 296 34-366 23-428 (436)
28 1izo_A P450bsbeta, cytochrome 100.0 3.7E-54 1.3E-58 399.2 21.5 291 45-366 8-415 (417)
29 1n97_A CYP175A1; electron tran 100.0 9.2E-55 3.2E-59 399.4 15.4 287 41-366 3-386 (389)
30 1jfb_A Nitric-oxide reductase 100.0 5.1E-53 1.7E-57 389.9 25.2 267 38-337 2-382 (404)
31 1ued_A P450 OXYC, P450 monooxy 100.0 5.2E-53 1.8E-57 389.7 23.1 284 35-362 8-405 (406)
32 3dsk_A Cytochrome P450 74A, ch 100.0 8.9E-54 3E-58 405.4 16.7 302 32-337 23-472 (495)
33 3awm_A Fatty acid alpha-hydrox 100.0 6.8E-53 2.3E-57 390.4 19.7 292 39-365 4-412 (415)
34 4fb2_A P450CIN; heme, monooxyg 100.0 3E-51 1E-55 377.2 23.7 249 56-338 18-371 (398)
35 3a4g_A Vitamin D hydroxylase; 100.0 1.4E-50 4.9E-55 373.7 27.2 274 56-366 19-401 (411)
36 1s1f_A Putative cytochrome P45 100.0 1.1E-50 3.8E-55 374.1 26.2 285 37-363 8-404 (406)
37 3aba_A Cytochrome P450; oxidor 100.0 8.3E-51 2.8E-55 374.7 24.9 274 56-366 18-402 (403)
38 2zbx_A Cytochrome P450-SU1; be 100.0 1.1E-50 3.9E-55 374.8 25.7 268 36-337 4-384 (412)
39 3ejb_B Biotin biosynthesis cyt 100.0 6.8E-51 2.3E-55 375.7 24.0 272 56-366 12-396 (404)
40 3dan_A Cytochrome P450 74A2; A 100.0 2E-51 6.9E-56 387.1 20.7 296 34-337 6-454 (473)
41 3nc3_A Cytochrome P450 CYPX; c 100.0 1.2E-50 4.3E-55 377.4 20.5 277 57-365 53-440 (441)
42 2zwu_A Camphor 5-monooxygenase 100.0 3.2E-50 1.1E-54 371.8 22.8 293 31-366 5-410 (415)
43 3abb_A CYP105D6, cytochrome P4 100.0 1.4E-50 4.7E-55 373.9 20.1 275 53-366 21-407 (408)
44 3ivy_A Cytochrome P450 CYP125; 100.0 3.3E-50 1.1E-54 374.0 22.7 269 33-337 14-406 (433)
45 1odo_A Putative cytochrome P45 100.0 6.6E-50 2.3E-54 369.3 23.2 275 53-365 12-407 (408)
46 2jjn_A Cytochrome P450 113A1; 100.0 7.4E-50 2.5E-54 369.4 22.9 281 34-365 16-405 (411)
47 1cpt_A Cytochrome P450-TERP; o 100.0 5.9E-50 2E-54 372.0 22.3 287 35-366 4-428 (428)
48 3oft_A Cytochrome P450, CYP101 100.0 5.5E-50 1.9E-54 368.7 21.0 250 56-338 23-375 (396)
49 2y5n_A MYCG, P-450-like protei 100.0 2.9E-49 9.8E-54 365.6 25.7 270 56-362 36-416 (417)
50 3lxh_A Cytochrome P450; heme, 100.0 1.6E-49 5.6E-54 368.2 24.0 271 56-366 37-417 (421)
51 1gwi_A CYP154C1, cytochrome P4 100.0 3.3E-50 1.1E-54 371.5 19.0 277 53-366 14-409 (411)
52 2z36_A MOXA, cytochrome P450 t 100.0 3.8E-49 1.3E-53 364.5 24.9 267 34-337 4-385 (413)
53 3tyw_A Putative cytochrome P45 100.0 2.1E-49 7.1E-54 367.0 23.2 250 56-338 28-390 (417)
54 2dkk_A Cytochrome P450; CYP158 100.0 3.3E-49 1.1E-53 364.5 24.2 273 56-366 26-410 (411)
55 1z8o_A 6-deoxyerythronolide B 100.0 4.7E-49 1.6E-53 363.2 24.6 270 56-363 13-402 (404)
56 2xbk_A PIMD protein; epoxidati 100.0 1.1E-48 3.8E-53 360.0 25.2 270 56-362 25-403 (404)
57 3mgx_A Putative P450 monooxyge 100.0 2.1E-49 7.1E-54 366.1 20.3 271 57-366 37-415 (415)
58 2z3t_A Cytochrome P450; monoxy 100.0 4.9E-49 1.7E-53 365.1 21.9 270 56-365 19-415 (425)
59 3buj_A CALO2; heme, iron, meta 100.0 2.5E-49 8.6E-54 364.3 19.6 268 57-366 13-396 (397)
60 2uuq_A CYP130, cytochrome P450 100.0 4.2E-49 1.4E-53 364.3 19.7 278 48-366 12-413 (414)
61 2xkr_A CYP142, putative cytoch 100.0 2.2E-48 7.4E-53 358.1 23.0 242 56-336 17-368 (398)
62 3oo3_A OXY protein; cytochrome 100.0 2.1E-48 7E-53 356.8 22.6 267 56-362 11-383 (384)
63 1q5d_A P450 epoxidase; cytochr 100.0 1.3E-48 4.4E-53 361.8 20.5 269 56-366 25-416 (419)
64 4dnj_A Putative cytochrome P45 100.0 9.7E-48 3.3E-52 354.8 23.4 282 42-365 17-411 (412)
65 3rwl_A Cytochrome P450 alkane 100.0 1.6E-47 5.5E-52 354.8 24.5 270 57-365 38-426 (426)
66 3r9b_A Cytochrome P450 164A2; 100.0 6E-48 2.1E-52 357.6 21.2 268 56-366 28-417 (418)
67 1lfk_A OXYB, P450 monooxygenas 100.0 4.1E-48 1.4E-52 356.2 17.7 243 63-337 19-376 (398)
68 1n40_A P450 MT2, cytochrome P4 100.0 1.5E-47 5E-52 352.2 20.9 267 56-362 15-395 (396)
69 3tkt_A Cytochrome P450; aromat 100.0 2.2E-47 7.5E-52 356.5 21.3 245 59-336 47-427 (450)
70 2wm5_A CYP124, putative cytoch 100.0 4.9E-47 1.7E-51 352.5 22.3 248 57-336 44-414 (435)
71 1io7_A Cytochrome P450 CYP119; 100.0 2.4E-45 8E-50 334.3 19.8 261 59-366 1-367 (368)
72 2wiy_A XPLA-heme, cytochrome P 100.0 2.1E-45 7.1E-50 337.5 19.4 246 57-337 20-374 (394)
73 3p3o_A Cytochrome P450; monoox 100.0 6.6E-46 2.3E-50 343.2 15.7 250 56-337 32-394 (416)
74 3b4x_A 367AA long hypothetical 100.0 6.2E-45 2.1E-49 331.2 19.4 257 59-365 1-366 (367)
75 2rfb_A Cytochrome P450; heme, 100.0 1.4E-44 4.8E-49 326.1 20.5 226 68-337 2-324 (343)
76 4dxy_A Cytochrome P450, CYP101 100.0 4.5E-41 1.5E-45 310.0 23.2 249 56-338 36-394 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.5E-42 5.3E-47 313.5 1.3 143 166-337 218-361 (381)
78 1s79_A Lupus LA protein; RRM, 66.0 27 0.00093 24.0 7.1 59 44-105 12-78 (103)
79 2krb_A Eukaryotic translation 63.3 27 0.00092 22.5 8.1 51 47-98 5-66 (81)
80 1iqt_A AUF1, heterogeneous nuc 61.0 26 0.00089 22.0 6.0 56 47-105 3-67 (75)
81 3lqv_A PRE-mRNA branch site pr 60.2 40 0.0014 23.4 8.1 57 38-97 3-65 (115)
82 2mss_A Protein (musashi1); RNA 54.7 37 0.0013 21.3 6.5 56 47-105 3-67 (75)
83 2diu_A KIAA0430 protein; struc 49.7 42 0.0014 23.0 5.4 64 45-109 11-77 (96)
84 2nlw_A Eukaryotic translation 45.6 69 0.0023 21.8 7.4 62 43-105 15-88 (105)
85 3beg_B Splicing factor, argini 44.1 78 0.0027 22.0 7.5 60 45-107 18-80 (115)
86 3s7r_A Heterogeneous nuclear r 42.8 47 0.0016 21.5 5.0 56 42-100 10-74 (87)
87 3d2w_A TAR DNA-binding protein 41.8 72 0.0025 20.9 6.0 53 40-95 8-64 (89)
88 3s6e_A RNA-binding protein 39; 40.6 58 0.002 22.9 5.4 69 39-107 3-84 (114)
89 1jb0_M Photosystem 1 reaction 37.4 46 0.0016 17.4 4.2 27 1-27 1-27 (31)
90 2jwn_A Embryonic polyadenylate 36.7 79 0.0027 22.1 5.7 58 45-105 38-104 (124)
91 2kvi_A Nuclear polyadenylated 35.5 95 0.0033 20.5 7.3 60 44-106 11-73 (96)
92 2cpf_A RNA binding motif prote 34.9 97 0.0033 20.4 5.8 59 44-105 6-77 (98)
93 2pe8_A Splicing factor 45; RRM 32.7 83 0.0028 21.6 5.1 68 40-107 5-85 (105)
94 3ex7_B RNA-binding protein 8A; 32.5 1.3E+02 0.0044 21.1 7.7 60 45-107 24-93 (126)
95 3ns6_A Eukaryotic translation 32.5 1.1E+02 0.0038 20.5 5.7 53 45-97 8-72 (100)
96 4f25_A Polyadenylate-binding p 32.3 1.2E+02 0.0042 20.9 6.1 58 45-105 7-72 (115)
97 1p27_B RNA-binding protein 8A; 32.3 1.1E+02 0.0039 20.4 7.2 58 45-105 25-92 (106)
98 2cq4_A RNA binding motif prote 32.1 85 0.0029 21.6 5.2 55 46-103 28-91 (114)
99 1x4b_A Heterogeneous nuclear r 31.9 1E+02 0.0035 21.2 5.6 58 45-105 29-95 (116)
100 1jdm_A Sarcolipin; helix, memb 31.5 39 0.0013 17.1 2.1 15 12-26 12-26 (31)
101 1x4e_A RNA binding motif, sing 30.7 1E+02 0.0035 19.6 5.1 53 42-97 4-65 (85)
102 2bz2_A Negative elongation fac 30.6 1.3E+02 0.0045 21.1 6.0 58 44-106 40-101 (121)
103 2ywk_A Putative RNA-binding pr 30.4 1.1E+02 0.0039 19.9 5.5 51 44-97 17-75 (95)
104 2rs2_A Musashi-1, RNA-binding 29.6 1.3E+02 0.0046 20.4 6.3 54 43-99 25-87 (109)
105 2dgu_A Heterogeneous nuclear r 29.4 1.3E+02 0.0044 20.1 6.6 60 43-105 11-72 (103)
106 3ucg_A Polyadenylate-binding p 28.7 1.2E+02 0.004 19.5 5.8 56 47-105 10-74 (89)
107 2jvo_A Nucleolar protein 3; nu 28.6 1.4E+02 0.0048 20.3 5.9 57 45-104 33-91 (108)
108 1uaw_A Mouse-musashi-1; RNP-ty 28.4 1E+02 0.0035 19.1 4.7 51 47-100 4-63 (77)
109 2a3j_A U1 small nuclear ribonu 28.2 1.6E+02 0.0056 20.9 6.7 63 44-106 30-100 (127)
110 3ulh_A THO complex subunit 4; 28.0 1.4E+02 0.0047 20.0 5.8 52 44-98 30-89 (107)
111 2kxn_B Transformer-2 protein h 27.8 1.6E+02 0.0056 20.8 9.7 62 41-105 44-115 (129)
112 4h6h_A Fibrinogen-binding prot 27.6 1.1E+02 0.0036 20.0 4.2 39 166-204 47-85 (87)
113 4fxv_A ELAV-like protein 1; RN 27.2 1.4E+02 0.0049 19.9 5.8 50 46-98 22-80 (99)
114 2cqd_A RNA-binding region cont 27.2 1.5E+02 0.0052 20.3 6.7 60 43-105 17-85 (116)
115 2hvz_A Splicing factor, argini 27.2 1.4E+02 0.0047 19.8 6.2 57 47-106 4-65 (101)
116 1oo0_B CG8781-PA, drosophila Y 27.1 1.5E+02 0.005 20.1 6.9 50 45-97 28-86 (110)
117 2dnz_A Probable RNA-binding pr 26.9 1.3E+02 0.0046 19.5 8.0 63 42-107 4-76 (95)
118 3md1_A Nuclear and cytoplasmic 26.8 1.2E+02 0.0042 19.0 5.7 49 47-98 5-62 (83)
119 2qff_A Hypothetical protein; c 26.6 1.1E+02 0.0037 19.8 4.1 39 166-204 43-81 (82)
120 2err_A Ataxin-2-binding protei 26.4 99 0.0034 21.1 4.6 50 45-97 31-87 (109)
121 2fy1_A RNA-binding motif prote 26.4 1.6E+02 0.0056 20.3 6.8 60 44-106 8-76 (116)
122 1whw_A Hypothetical protein ri 26.3 1.4E+02 0.0048 19.6 7.4 52 43-97 8-68 (99)
123 2dgt_A RNA-binding protein 30; 26.1 1.4E+02 0.0047 19.4 6.5 60 43-105 10-71 (92)
124 2cqc_A Arginine/serine-rich sp 25.8 1.4E+02 0.0048 19.4 7.1 56 40-98 12-76 (95)
125 1x4d_A Matrin 3; structural ge 25.7 1.6E+02 0.0055 20.0 6.3 56 40-97 12-70 (102)
126 2win_M Staphylococcal compleme 24.8 1.1E+02 0.0038 20.1 4.0 40 166-205 50-89 (92)
127 3ue2_A Poly(U)-binding-splicin 24.8 1.6E+02 0.0055 20.7 5.5 67 42-108 19-101 (118)
128 3t49_A SCIN-B, fibrinogen-bind 24.6 86 0.0029 19.6 3.3 38 167-204 34-71 (73)
129 1nu4_A U1A RNA binding domain; 24.2 1.5E+02 0.0053 19.3 6.8 52 44-98 9-70 (97)
130 3arc_T Photosystem II reaction 24.2 55 0.0019 17.1 2.0 22 1-22 1-22 (32)
131 3n9u_C Cleavage and polyadenyl 24.1 1.9E+02 0.0065 21.4 6.1 50 46-98 58-118 (156)
132 1p1t_A Cleavage stimulation fa 24.0 1.6E+02 0.0056 19.5 6.3 50 45-97 10-68 (104)
133 2cjk_A Nuclear polyadenylated 23.7 2E+02 0.0069 20.9 6.4 59 45-106 89-156 (167)
134 2cpi_A CCR4-NOT transcription 23.5 82 0.0028 21.6 3.7 61 43-106 15-91 (111)
135 1whx_A Hypothetical protein ri 23.5 1.8E+02 0.0062 19.8 7.7 60 45-107 12-75 (111)
136 2dhg_A TRNA selenocysteine ass 23.4 1.7E+02 0.0057 19.5 8.5 56 40-98 6-70 (104)
137 2dgs_A DAZ-associated protein 23.3 1.6E+02 0.0056 19.3 8.2 62 43-107 10-80 (99)
138 2jvr_A Nucleolar protein 3; RN 22.8 1.9E+02 0.0066 19.9 6.4 59 44-105 29-94 (111)
139 2voo_A Lupus LA protein; RNA-b 22.7 1.6E+02 0.0053 22.8 5.6 52 46-100 112-171 (193)
140 2cqi_A Nucleolysin TIAR; RNA r 22.5 1.8E+02 0.006 19.3 6.3 52 43-97 15-73 (103)
141 2cpz_A CUG triplet repeat RNA- 22.2 1.8E+02 0.006 19.9 5.4 52 44-98 26-86 (115)
142 1l3k_A Heterogeneous nuclear r 21.9 1.9E+02 0.0064 21.8 6.0 59 43-104 13-80 (196)
143 1x4c_A Splicing factor, argini 21.7 1.9E+02 0.0066 19.5 7.5 51 45-98 17-69 (108)
144 3v4m_A Splicing factor U2AF 65 21.6 2E+02 0.0067 19.6 6.0 47 61-107 30-88 (105)
145 3s8s_A Histone-lysine N-methyl 21.3 2E+02 0.007 19.6 5.7 52 43-97 6-66 (110)
146 1wf0_A TDP-43, TAR DNA-binding 21.2 1.3E+02 0.0043 19.4 4.2 48 45-95 7-58 (88)
147 1sjq_A Polypyrimidine tract-bi 21.1 2.1E+02 0.0071 19.7 6.5 53 42-97 15-70 (105)
148 1x4g_A Nucleolysin TIAR; struc 21.1 2E+02 0.0067 19.4 6.9 50 45-97 27-79 (109)
149 1sjr_A Polypyrimidine tract-bi 21.0 2.7E+02 0.0093 21.0 6.4 50 46-98 49-103 (164)
150 1x5p_A Negative elongation fac 20.9 1.9E+02 0.0063 19.0 7.2 52 42-98 14-68 (97)
151 1x5t_A Splicing factor 3B subu 20.7 1.8E+02 0.0061 18.9 5.0 51 44-97 6-66 (96)
152 2qfj_A FBP-interacting repress 20.7 2.9E+02 0.0099 21.1 8.0 49 46-97 31-88 (216)
153 1rk8_A CG8781-PA, CG8781-PA pr 20.7 2.6E+02 0.0087 20.7 6.3 50 45-97 74-132 (165)
154 2xnq_A Nuclear polyadenylated 20.5 1.9E+02 0.0066 19.0 7.0 50 45-97 24-75 (97)
155 4a8x_A RNA-binding protein wit 20.3 1.7E+02 0.006 18.5 6.9 57 46-105 7-74 (88)
156 2la4_A Nuclear and cytoplasmic 20.1 2E+02 0.0067 19.0 6.1 50 45-97 29-81 (101)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=3.3e-71 Score=522.82 Aligned_cols=328 Identities=27% Similarity=0.455 Sum_probs=271.5
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
+..++||||+++|+|||++++..++++..+.+|++||||||++++|++++|+|+||+++++++.+++..|++++......
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 33478999999999999999966789999999999999999999999999999999999999998888898887665554
Q ss_pred hhccC--CCceEecCCChhHHHHHHHHHhhhcchhhhhh--hhhhHHHHHHHHHhh------------------------
Q 044178 114 FTSYD--YTNIGLAPYGSYWRQLRRICTVELLSTKRVQS--FRSIREEEVSNLIKT------------------------ 165 (366)
Q Consensus 114 ~~~~~--~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~--~~~~~~~~~~~l~~~------------------------ 165 (366)
....+ +.++.+..+|+.|+++|+.+ .+.|+...+.. +...+......+...
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIA 165 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHH
Confidence 43332 34455667799999999997 44443322211 111111111111110
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 166 ~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (479)
T 3tbg_A 166 SLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQP 245 (479)
T ss_dssp HHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCTTSC
T ss_pred HhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence
Q ss_pred ---------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCH
Q 044178 166 ---------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNE 212 (366)
Q Consensus 166 ---------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~ 212 (366)
++++||+|||+.+++|++++|++||++|+|+++|++.+++.++.++.
T Consensus 246 ~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~ 325 (479)
T 3tbg_A 246 PRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEM 325 (479)
T ss_dssp CCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCH
T ss_pred cchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccch
Confidence 67899999999999999999999999999999999999998889999
Q ss_pred HHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCC
Q 044178 213 AAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDY 292 (366)
Q Consensus 213 ~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~ 292 (366)
+++++||||+||++|+||++|+++...+|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++++++
T Consensus 326 ~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~- 404 (479)
T 3tbg_A 326 GDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGH- 404 (479)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCC-
T ss_pred hhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCCcc-
Confidence 9999999999999999999999999987788999999999999999999999999999999999999999999987765
Q ss_pred CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 293 RGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 293 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
..++++|+|||+|+|+|+|++||.+|+++++++||++|||+++++.+ ........++++.|+ +++++++||
T Consensus 405 ~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~P~-~~~v~~~pR 475 (479)
T 3tbg_A 405 FVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQP--RPSHHGVFAFLVSPS-PYELCAVPR 475 (479)
T ss_dssp BCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSC--CCCSCEEESSSEEEC-CCCBEEEEC
T ss_pred cCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCC--CccccccceeeecCC-CeEEEEEEC
Confidence 34567899999999999999999999999999999999999988754 233334456677776 555555554
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=2.9e-66 Score=490.92 Aligned_cols=330 Identities=28% Similarity=0.497 Sum_probs=268.2
Q ss_pred CCCCCCCCCCCCCcceeeccccCC-CCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 33 STSQKLPPGPWRLPLIGNLHQLVA-SLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 33 ~~~~~~ppgp~~~P~lG~~~~~~~-~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
+++.+.||||+++|++||++++.. ++++..+.+|+++||+||++++|+.++++|+||+.+++++.+++..|++++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 356778999999999999998843 3578999999999999999999999999999999999999998889998887655
Q ss_pred cchhccCCCceEecCCChhHHHHHHHHHhhhcch--hhhhhhhhhHHHHHHHHHhh------------------------
Q 044178 112 AKFTSYDYTNIGLAPYGSYWRQLRRICTVELLST--KRVQSFRSIREEEVSNLIKT------------------------ 165 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~------------------------ 165 (366)
.......+.++.+..+|+.|+++|+++ .+.|+. .....+.+.+.+++..+++.
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence 554444456676777799999999997 554542 22333444444444333321
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 242 (494)
T 3swz_A 163 LICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSIT 242 (494)
T ss_dssp HHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCCC
T ss_pred HHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchh
Confidence
Q ss_pred -------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCC
Q 044178 166 -------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKE 208 (366)
Q Consensus 166 -------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~ 208 (366)
++++||+|||+.+++|++++|++||++|+|+++||+++++.++
T Consensus 243 d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~ 322 (494)
T 3swz_A 243 NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSR 322 (494)
T ss_dssp SHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCC
Confidence 2468999999999999999999999999999999999999888
Q ss_pred CCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCC
Q 044178 209 NVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNS 288 (366)
Q Consensus 209 ~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~ 288 (366)
.++.+++++||||+||++|+||++|+++..++|.+.+|++++||.||+||.|+++.+++||||++|+||++|+||||+++
T Consensus 323 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~ 402 (494)
T 3swz_A 323 TPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNP 402 (494)
T ss_dssp CCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGGGGBCT
T ss_pred CCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcccccCC
Confidence 89999999999999999999999999999778999999999999999999999999999999999999999999999987
Q ss_pred CCCCC-CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 289 SIDYR-GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 289 ~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++... .....++|||+|+|.|+|++||.+|+++++++|+++|+|+++++.+ ..+.....+.+..|+ ++++.+++|
T Consensus 403 ~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~p~-~~~v~~~~R 478 (494)
T 3swz_A 403 AGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQ--LPSLEGIPKVVFLID-SFKVKIKVR 478 (494)
T ss_dssp TSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCC--CCCCSCEESSSEECC-CCCEEEEEC
T ss_pred CCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCC--CCCCCCccceeecCC-CcEEEEEEc
Confidence 64321 2456899999999999999999999999999999999999877643 223333445566654 444444443
No 3
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=2.7e-66 Score=490.06 Aligned_cols=317 Identities=26% Similarity=0.460 Sum_probs=272.0
Q ss_pred CCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhC-CcccCCCCcccccchhcc
Q 044178 39 PPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTH-DLVFAQRPLLVSAKFTSY 117 (366)
Q Consensus 39 ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~-~~~~~~~~~~~~~~~~~~ 117 (366)
||||+++|++||++++ ..+++.++.+|+++||+||++++|+.++++|+||+.+++++.++ ...|..++.......
T Consensus 16 ~PGP~~~PliGn~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~--- 91 (485)
T 3nxu_A 16 IPGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF--- 91 (485)
T ss_dssp CCCCCCBTTTBTGGGG-GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG---
T ss_pred CCCCCCcCeecCcHHh-hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc---
Confidence 7999999999999999 67899999999999999999999999999999999999999876 566666554332221
Q ss_pred CCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------
Q 044178 118 DYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------- 165 (366)
Q Consensus 118 ~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------- 165 (366)
.+.++ +..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++.+++.
T Consensus 92 ~~~~l-~~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~ 169 (485)
T 3nxu_A 92 MKSAI-SIAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGV 169 (485)
T ss_dssp GGGST-TTCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSC
T ss_pred cccCc-cccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCC
Confidence 12333 344699999999998 67788887777666655555444432
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 249 (485)
T 3nxu_A 170 NIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDF 249 (485)
T ss_dssp CCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC---CCCH
T ss_pred ccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhccCCCcccH
Confidence
Q ss_pred -----------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhh
Q 044178 166 -----------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIH 216 (366)
Q Consensus 166 -----------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~ 216 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++++.++.++++
T Consensus 250 l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~ 329 (485)
T 3nxu_A 250 LQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVL 329 (485)
T ss_dssp HHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCCHHHHH
T ss_pred HHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCHHHHh
Confidence 568999999999999999999999999999999999999988889999999
Q ss_pred cChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCC
Q 044178 217 ELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKD 296 (366)
Q Consensus 217 ~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~ 296 (366)
+||||+|||+|+||++|+++.. +|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++++.. ...+
T Consensus 330 ~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~-~~~~ 407 (485)
T 3nxu_A 330 QMEYLDMVVNETLRLFPIAMRL-ERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDP 407 (485)
T ss_dssp HCHHHHHHHHHHHHHSCSCSCE-EEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHHT-TSCT
T ss_pred cChHHHHHHHHHHhcCCCccCc-ceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCccc-cCCC
Confidence 9999999999999999999875 8999999999999999999999999999999999999999999999975433 2345
Q ss_pred CcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 297 FEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 297 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
..++|||+|+|.|+|++||.+|+++++++++++|+|++.++.. .+.....+.++.|+.++++++++|
T Consensus 408 ~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~r 474 (485)
T 3nxu_A 408 YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQ---IPLKLSLGGLLQPEKPVVLKVESR 474 (485)
T ss_dssp TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCC---SSCCBCSSSSCCBSSCCEEEEEEC
T ss_pred CCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCC---CCcccCCCeeccCCCCeEEEEEEc
Confidence 6899999999999999999999999999999999999877642 223334456789988999988876
No 4
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=1.2e-66 Score=489.40 Aligned_cols=322 Identities=20% Similarity=0.351 Sum_probs=277.2
Q ss_pred CCCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 35 SQKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 35 ~~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
+.+.||+|++ +|+|||++++ .++++.++.++++||||||+++++|.++++|+||+.+++++.+++..++.++......
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~-~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~ 87 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLT 87 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHh-hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhh
Confidence 4456788775 9999999999 7899999999999999999999999999999999999999998877777765433322
Q ss_pred hhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------
Q 044178 114 FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------- 165 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------- 165 (366)
... .+.++.+..+++.|+++|+.+ .+.|+.+.++.+.+.+.+++.++++.
T Consensus 88 ~~~-~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG~ 165 (461)
T 3ld6_A 88 TPV-FGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGK 165 (461)
T ss_dssp HHH-HCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred hcc-CCCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCc
Confidence 211 245666667799999999998 78899998888888888888777764
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~ 245 (461)
T 3ld6_A 166 EIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDG 245 (461)
T ss_dssp HHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHHHHHTCBCTTS
T ss_pred chhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhHHhhhccc
Confidence
Q ss_pred -------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC-CCCCHHHhhcChhHHHHHHHHhcc
Q 044178 166 -------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGK-ENVNEAAIHELKFLKLVVKETLRL 231 (366)
Q Consensus 166 -------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~-~~~~~~~l~~l~~l~a~i~E~lRl 231 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++. ..++.+++++||||+|||+|+||+
T Consensus 246 ~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~lRl 325 (461)
T 3ld6_A 246 RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRL 325 (461)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhhhhheeeecccc
Confidence 678999999999999999999999999999999999999865 467899999999999999999999
Q ss_pred CCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCcc
Q 044178 232 HPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPG 311 (366)
Q Consensus 232 ~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 311 (366)
+|+++.. .|.+.+|++++||.||+|+.|+++.+++|+||++|+||++|+||||+++++. ...+..|+|||+|+|+|+|
T Consensus 326 ~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~-~~~~~~~~pFG~G~r~C~G 403 (461)
T 3ld6_A 326 RPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SGEKFAYVPFGAGRHRCIG 403 (461)
T ss_dssp SCSCCCE-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHH-HHSSSSSCTTCCGGGCCSC
T ss_pred CCchhcc-ccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcc-cCCCCccccCCCcCcCChh
Confidence 9999987 6999999999999999999999999999999999999999999999987643 2345689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 312 ITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 312 ~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++||.+|+++++++||++|||+++++..+ .. ....++..| .++.|++++|
T Consensus 404 ~~lA~~e~~~~la~ll~~f~~~l~~~~~~---~~-~~~~~~~~p-~~~~v~~~~R 453 (461)
T 3ld6_A 404 ENFAYVQIKTIWSTMLRLYEFDLIDGYFP---TV-NYTTMIHTP-ENPVIRYKRR 453 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEECSTTCCC---CB-CCSSSSCCB-SSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCEEEeCCCCCC---cc-cccceEEcC-CceEEEEEEC
Confidence 99999999999999999999999887541 11 223334445 4778888887
No 5
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=1e-65 Score=485.59 Aligned_cols=324 Identities=20% Similarity=0.403 Sum_probs=275.8
Q ss_pred CCCCCCCCCCCCCcceeeccccC----CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCc
Q 044178 33 STSQKLPPGPWRLPLIGNLHQLV----ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPL 108 (366)
Q Consensus 33 ~~~~~~ppgp~~~P~lG~~~~~~----~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~ 108 (366)
.++.+.+|||+++|++||++++. .++++..+.+|+++||+||++++|+.++++++||+.+++|+.++ ..|.+++.
T Consensus 20 ~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~ 98 (482)
T 3k9v_A 20 TRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLE 98 (482)
T ss_dssp CEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCC
T ss_pred cCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCC
Confidence 35677789999999999998874 23678999999999999999999999999999999999999864 56766654
Q ss_pred cccc---chhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------
Q 044178 109 LVSA---KFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------- 165 (366)
Q Consensus 109 ~~~~---~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------- 165 (366)
.... ......+.++. ..+|+.|+++|+.+...+++.+.++.+.+.+.++++++++.
T Consensus 99 ~~~~~~~~~~~~~~~~l~-~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~ 177 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYGLM-ILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNK 177 (482)
T ss_dssp CHHHHHHHHHHTCCCCTT-TCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHH
T ss_pred chHHHHHHHhcCCCCCce-eCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 3211 11111234443 44699999999998555557777777776666666655532
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 178 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r 257 (482)
T 3k9v_A 178 WSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNR 257 (482)
T ss_dssp HHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHH
Q 044178 166 --------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEA 213 (366)
Q Consensus 166 --------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~ 213 (366)
++++||+|||+.+++|++++|++||++|+|+++||++++++++.++.+
T Consensus 258 ~~~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~ 337 (482)
T 3k9v_A 258 LQRYSQQPGADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAE 337 (482)
T ss_dssp HHHTTTCTTSCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGG
T ss_pred HHHhccCCchHHHHHHHhccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHH
Confidence 778999999999999999999999999999999999999988889999
Q ss_pred HhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCC
Q 044178 214 AIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYR 293 (366)
Q Consensus 214 ~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~ 293 (366)
++++||||+||++|+||++|+++.. +|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++++..
T Consensus 338 ~l~~lpyl~avi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-- 414 (482)
T 3k9v_A 338 DLRNMPYLKACLKESMRLTPSVPFT-TRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKK-- 414 (482)
T ss_dssp GGGGCHHHHHHHHHHHHHSCSCCEE-EEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGTCTTSC--
T ss_pred HHhhCHHHHHHHHHHhhcCCCCcCc-ccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccccCCCCCC--
Confidence 9999999999999999999999985 8999999999999999999999999999999999999999999999986543
Q ss_pred CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 294 GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 294 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
..+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.+ +......++.|+.++++++++|
T Consensus 415 ~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~R 482 (482)
T 3k9v_A 415 INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEP-----VEMLHLGILVPSRELPIAFRPR 482 (482)
T ss_dssp CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCC-----CCEEESSSEEESSSCCEEEEEC
T ss_pred CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCC-----cccccceeecCCCCcceEEeeC
Confidence 3567899999999999999999999999999999999999876542 3334467889999999999987
No 6
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-65 Score=487.18 Aligned_cols=327 Identities=24% Similarity=0.444 Sum_probs=247.4
Q ss_pred CCCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc
Q 044178 33 STSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA 112 (366)
Q Consensus 33 ~~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~ 112 (366)
.++.+.||||+++|++||++++ .++++.++.+|+++||+||++++++.++++|+||+.+++|+.++...|.+++.....
T Consensus 5 ~~~~~~pPgP~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 5 TSSKGKPPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred cCCCCCCcCCCCCCeeCchhhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 3566789999999999999999 678999999999999999999999999999999999999998888888877765544
Q ss_pred chhccCCCceEecCCChhHHHHHHHHHhhhcchhhh------hhhhhhHHHHHHHHHhh---------------------
Q 044178 113 KFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRV------QSFRSIREEEVSNLIKT--------------------- 165 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~------~~~~~~~~~~~~~l~~~--------------------- 165 (366)
.... .+.++.+..+|+.|+++|+++. +.|+.... +.+.+.+.++++.+++.
T Consensus 84 ~~~~-~g~~l~~~~~g~~w~~~R~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~ 161 (507)
T 3pm0_A 84 RVVS-GGRSMAFGHYSEHWKVQRRAAH-SMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAV 161 (507)
T ss_dssp HHGG-GGTCSSSSCSSHHHHHHHHHHH-HHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHH
T ss_pred Hhhc-CCCceEECCCChHHHHHHHHHH-HHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHH
Confidence 3322 3456666667999999999873 32221110 11222222222222211
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 162 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 241 (507)
T 3pm0_A 162 ANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCE 241 (507)
T ss_dssp HHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence
Q ss_pred --------------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 044178 166 --------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVR 201 (366)
Q Consensus 166 --------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~ 201 (366)
++++||+|||+.+++|++++|++||++|+|+++||+
T Consensus 242 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~ 321 (507)
T 3pm0_A 242 SLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELD 321 (507)
T ss_dssp HCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999
Q ss_pred HHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcC
Q 044178 202 RVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALY 281 (366)
Q Consensus 202 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~ 281 (366)
+++++++.++.+++++||||+||++|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+
T Consensus 322 ~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~ 401 (507)
T 3pm0_A 322 QVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFD 401 (507)
T ss_dssp HHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCC
T ss_pred HhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccC
Confidence 99988888999999999999999999999999999877899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCC-CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceE
Q 044178 282 PERFLNSSIDYRG-KDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLL 360 (366)
Q Consensus 282 P~R~l~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 360 (366)
||||+++++.... .+..++|||+|+|.|+|++||.+|+++++++++++|||++.++.. ++.....++++.|+ +++
T Consensus 402 PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~-~~~ 477 (507)
T 3pm0_A 402 PARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP---AKMNFSYGLTIKPK-SFK 477 (507)
T ss_dssp GGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCC---SCCCEEESSSEEEC-SCC
T ss_pred CCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCC---CCCCCCCCccccCC-CcE
Confidence 9999986643211 135799999999999999999999999999999999999877643 33334456677776 345
Q ss_pred EeeecC
Q 044178 361 LIPVPH 366 (366)
Q Consensus 361 ~~~~~~ 366 (366)
+++++|
T Consensus 478 v~~~~R 483 (507)
T 3pm0_A 478 VNVTLR 483 (507)
T ss_dssp EEEEES
T ss_pred EEEEEc
Confidence 555554
No 7
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=2e-64 Score=476.09 Aligned_cols=325 Identities=29% Similarity=0.454 Sum_probs=258.4
Q ss_pred CCCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc
Q 044178 33 STSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA 112 (366)
Q Consensus 33 ~~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~ 112 (366)
.++.++||||+++|++||++++...+++..+.+|+++||+||++++++.++++|+||+.+++++.++...|++++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 34567899999999999999985568999999999999999999999999999999999999999887788877654433
Q ss_pred chhccCCCceEecCCChhHHHHHHHHHhhhcchhhh--hhhhhhHHHHHHHHHhh-------------------------
Q 044178 113 KFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRV--QSFRSIREEEVSNLIKT------------------------- 165 (366)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~--~~~~~~~~~~~~~l~~~------------------------- 165 (366)
.... ++ ++.+ .+|+.|+++|++. ...+....+ ..+.+.+.++++.+++.
T Consensus 86 ~~~~-~~-~l~~-~~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~ 161 (476)
T 3e6i_A 86 HAHR-DR-GIIF-NNGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIAD 161 (476)
T ss_dssp GGGT-TS-SSTT-CCSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHH
T ss_pred heec-CC-CEEe-cCCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHH
Confidence 3222 12 4444 4599999999975 322221100 00111111111111100
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 162 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 241 (476)
T 3e6i_A 162 ILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCP 241 (476)
T ss_dssp HHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTSC
T ss_pred HHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Confidence
Q ss_pred --------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHH
Q 044178 166 --------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEA 213 (366)
Q Consensus 166 --------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~ 213 (366)
++++||+|||+.+++|++++|++||++|+|+++||+++++.++.++.+
T Consensus 242 ~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~ 321 (476)
T 3e6i_A 242 RDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIK 321 (476)
T ss_dssp CSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGG
T ss_pred ccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChh
Confidence 578999999999999999999999999999999999999887889999
Q ss_pred HhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCC
Q 044178 214 AIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYR 293 (366)
Q Consensus 214 ~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~ 293 (366)
++++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++++..
T Consensus 322 ~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~- 400 (476)
T 3e6i_A 322 DRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKF- 400 (476)
T ss_dssp GGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSSB-
T ss_pred hccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCCCCCc-
Confidence 9999999999999999999999976689999999999999999999999999999999999999999999999866542
Q ss_pred CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccc-cceeeecC-CceEEeee
Q 044178 294 GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEV-FGLTIRRK-NDLLLIPV 364 (366)
Q Consensus 294 ~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~p~-~~~~~~~~ 364 (366)
..+..++|||+|+|.|+|++||.+|+++++++++++|+|++..+.. +++.... .+++..|+ ..+++++|
T Consensus 401 ~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~R 471 (476)
T 3e6i_A 401 KYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPK--DIDLSPIHIGFGCIPPRYKLCVIPR 471 (476)
T ss_dssp CCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTT--TCCCSCSEESSSEECCCCCEEEEEC
T ss_pred cCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCC--CCCCCcccCccccCCCCeEEEEEec
Confidence 3456899999999999999999999999999999999999765432 3344332 45555554 45555544
No 8
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1.4e-64 Score=479.71 Aligned_cols=322 Identities=26% Similarity=0.423 Sum_probs=260.2
Q ss_pred ccCCCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccc
Q 044178 31 TKSTSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLV 110 (366)
Q Consensus 31 ~~~~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~ 110 (366)
+..++.+.||||++ ++++..++++..+.+|+++|||||++++|+.++++|+||+.+++++.++...|++++...
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~ 96 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIP 96 (496)
T ss_dssp ------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCT
T ss_pred hhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcc
Confidence 34466788999986 556656789999999999999999999999999999999999999998887888776654
Q ss_pred ccchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------
Q 044178 111 SAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------- 165 (366)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------- 165 (366)
.......+..++.+.++|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 97 ~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~ 175 (496)
T 3qz1_A 97 SYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICY 175 (496)
T ss_dssp TTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTT
T ss_pred hHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHH
Confidence 4433222233666665599999999997 55566554455555555555554432
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 176 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~ 255 (496)
T 3qz1_A 176 LTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDM 255 (496)
T ss_dssp TSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSSS
T ss_pred HhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccch
Confidence
Q ss_pred ------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC----CCCCC
Q 044178 166 ------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKG----KENVN 211 (366)
Q Consensus 166 ------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~----~~~~~ 211 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++ ++.+
T Consensus 256 l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~- 334 (496)
T 3qz1_A 256 TDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT- 334 (496)
T ss_dssp HHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-
T ss_pred HHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-
Confidence 46889999999999999999999999999999999999986 4566
Q ss_pred HHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCC
Q 044178 212 EAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSID 291 (366)
Q Consensus 212 ~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~ 291 (366)
.+++++||||+||++|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++++.
T Consensus 335 ~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~- 413 (496)
T 3qz1_A 335 YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGA- 413 (496)
T ss_dssp TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC---C-
T ss_pred hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCCC-
Confidence 8999999999999999999999999877899999999999999999999999999999999999999999999997642
Q ss_pred CCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 292 YRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 292 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
...++|||+|+|.|+|++||.+|+++++++++++|++++.++....+.......++++.|+ ++++.+++|
T Consensus 414 ----~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R 483 (496)
T 3qz1_A 414 ----NPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPR 483 (496)
T ss_dssp ----CCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC
T ss_pred ----CcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEe
Confidence 2279999999999999999999999999999999999987654322222222246677776 777777776
No 9
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.5e-64 Score=480.17 Aligned_cols=319 Identities=20% Similarity=0.293 Sum_probs=266.9
Q ss_pred CCCCCCCCCCCcceeeccccCC---CCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 35 SQKLPPGPWRLPLIGNLHQLVA---SLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 35 ~~~~ppgp~~~P~lG~~~~~~~---~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
+.+.||||+++|++||++++.. .+.+..+.+|+++|||||++++|+.++++++||+.+++++.+ ..|++++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 4467999999999999998731 245568999999999999999999999999999999999964 35666644322
Q ss_pred c-chhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------
Q 044178 112 A-KFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------- 165 (366)
Q Consensus 112 ~-~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------- 165 (366)
. ......+.++.+..+|+.|+++|+++ .+.|+...++.+.+.+.+++.++++.
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi 199 (503)
T 3s79_A 121 GLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTS 199 (503)
T ss_dssp HHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHH
T ss_pred hhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHH
Confidence 2 22233455666677799999999998 56777776666666555555555532
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 200 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l 279 (503)
T 3s79_A 200 NTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFA 279 (503)
T ss_dssp HHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHH
T ss_pred HHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence
Q ss_pred ----------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHH
Q 044178 166 ----------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKL 223 (366)
Q Consensus 166 ----------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a 223 (366)
++++||+|||+.+++|++++|++||++|+|+++||+++++ ++.++.+++++|||++|
T Consensus 280 ~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~a 358 (503)
T 3s79_A 280 TELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMEN 358 (503)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCCHHHHTTCHHHHH
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCCHHHHhcCHHHHH
Confidence 5789999999999999999999999999999999999998 56899999999999999
Q ss_pred HHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccC
Q 044178 224 VVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFG 303 (366)
Q Consensus 224 ~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg 303 (366)
+++|++|++|+++.. +|.+.+|++++||.|||||.|.++.+++|+| ++|+||++|+||||+++. ....++|||
T Consensus 359 vi~E~lRl~p~~~~~-~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~-----~~~~~~pFg 431 (503)
T 3s79_A 359 FIYESMRYQPVVDLV-MRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV-----PYRYFQPFG 431 (503)
T ss_dssp HHHHHHHHSCSSCCE-EEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC-----CTTTCCSSC
T ss_pred HHHhhhccCCCcccc-cccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC-----CcccccCCC
Confidence 999999999999998 5999999999999999999999999999999 999999999999999642 345799999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCc---eEEeeecC
Q 044178 304 AGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKND---LLLIPVPH 366 (366)
Q Consensus 304 ~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~~~~ 366 (366)
+|+|.|+|++||.+|+++++++++++|+|++.++...+ +.....+++++|+.+ ++++++||
T Consensus 432 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~v~~~~R 495 (503)
T 3s79_A 432 FGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVE--SIQKIHDLSLHPDETKNMLEMIFTPR 495 (503)
T ss_dssp CSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTT--TSCEEESSSEEECTTSCCCCEEEEEC
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCcc--ccccccceeecCCCccceeeEEeccC
Confidence 99999999999999999999999999999998876433 333445778888765 77777766
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=1.3e-63 Score=470.42 Aligned_cols=325 Identities=24% Similarity=0.403 Sum_probs=257.2
Q ss_pred CCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccch
Q 044178 35 SQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKF 114 (366)
Q Consensus 35 ~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~ 114 (366)
..+.||||+++|++||+.++..++++..+.+++++||+||++++++.++++++||+.+++|+.++...|++++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 1po5_A 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP 87 (476)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred CCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence 34678999999999999988456789999999999999999999999999999999999999776667776543322221
Q ss_pred hccCCCceEecCCChhHHHHHHHHHhhhcchh--hhhhhhhhHHHHHHH-------------------------------
Q 044178 115 TSYDYTNIGLAPYGSYWRQLRRICTVELLSTK--RVQSFRSIREEEVSN------------------------------- 161 (366)
Q Consensus 115 ~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~--~~~~~~~~~~~~~~~------------------------------- 161 (366)
. ..+.++.+. +|+.|+++|+++ .+.|+.. ..+.+.+.+.++++.
T Consensus 88 ~-~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~ 164 (476)
T 1po5_A 88 I-FQGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIV 164 (476)
T ss_dssp C-CSSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred h-cCCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHH
Confidence 1 123455444 699999999864 2222111 000000000000000
Q ss_pred --------------------------------------------------------------------------------
Q 044178 162 -------------------------------------------------------------------------------- 161 (366)
Q Consensus 162 -------------------------------------------------------------------------------- 161 (366)
T Consensus 165 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d 244 (476)
T 1po5_A 165 FGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRD 244 (476)
T ss_dssp HSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence
Q ss_pred ----HHh--------------h--------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHh
Q 044178 162 ----LIK--------------T--------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAI 215 (366)
Q Consensus 162 ----l~~--------------~--------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 215 (366)
+++ . ++++||+|||+.+++|++++|++||++|+|+++||++++++++.++.+++
T Consensus 245 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l 324 (476)
T 1po5_A 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDR 324 (476)
T ss_dssp HHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGG
T ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHH
Confidence 000 0 57889999999999999999999999999999999999987778999999
Q ss_pred hcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 044178 216 HELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGK 295 (366)
Q Consensus 216 ~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~ 295 (366)
++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++++.. ..
T Consensus 325 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~~-~~ 403 (476)
T 1po5_A 325 AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGAL-KR 403 (476)
T ss_dssp GGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCB-CC
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCCc-cC
Confidence 99999999999999999999976689999999999999999999999999999999999999999999999765432 24
Q ss_pred CCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCccc-ccceeeecCCceEEeeecC
Q 044178 296 DFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSE-VFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 296 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~ 366 (366)
+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.+. .+... ..++++.| .++++++++|
T Consensus 404 ~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~p-~~~~v~~~~R 472 (476)
T 1po5_A 404 NEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPED--IDLTPRESGVGNVP-PSYQIRFLAR 472 (476)
T ss_dssp CTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGG--CCCCCCSTTSSCCC-CCCCBEEEEC
T ss_pred CccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCC--CCccCCcCceeecC-cceEEEEEec
Confidence 568999999999999999999999999999999999998776431 12222 34666777 4666666665
No 11
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=3.1e-63 Score=467.92 Aligned_cols=326 Identities=24% Similarity=0.431 Sum_probs=260.8
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
+..+.||||+++|++||+.++...+++..+.+++++||+||++++++.++++++||+.+++|+.++...|+.++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 34467899999999999998855678999999999999999999999999999999999999976666677654432222
Q ss_pred hhccCCCceEecCCChhHHHHHHHHHhhhcchhhh--hhhhhhHHHHHHHHHhh--------------------------
Q 044178 114 FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRV--QSFRSIREEEVSNLIKT-------------------------- 165 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~--~~~~~~~~~~~~~l~~~-------------------------- 165 (366)
... .+.++.+. +|+.|+++|+++ .+.|+...+ +.+.+.+.++++.+++.
T Consensus 87 ~~~-~~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~ 163 (476)
T 2fdv_A 87 WVF-KGYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163 (476)
T ss_dssp HHH-TTCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred hhc-CCCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence 111 23455444 599999999986 333422111 11111111111111100
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 164 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~ 243 (476)
T 2fdv_A 164 VFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR 243 (476)
T ss_dssp HHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCC
T ss_pred HcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence
Q ss_pred -------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHH
Q 044178 166 -------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAA 214 (366)
Q Consensus 166 -------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~ 214 (366)
++++||+|||+.+++|++++|++||++|+|+++||++++++++.++.++
T Consensus 244 d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~ 323 (476)
T 2fdv_A 244 DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFED 323 (476)
T ss_dssp SHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGG
T ss_pred cHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhh
Confidence 4688999999999999999999999999999999999998777799999
Q ss_pred hhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCC
Q 044178 215 IHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRG 294 (366)
Q Consensus 215 l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~ 294 (366)
+++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++++.. .
T Consensus 324 ~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~~-~ 402 (476)
T 2fdv_A 324 RAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQF-K 402 (476)
T ss_dssp GGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCB-C
T ss_pred hhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCCC-C
Confidence 999999999999999999999966689999999999999999999999999999999999999999999999765432 2
Q ss_pred CCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCccc-ccceeeecCCceEEeeecC
Q 044178 295 KDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSE-VFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 295 ~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~ 366 (366)
.+..++|||+|+|.|+|++||.+|+++++++++++|++++.++.. ..+... ..++++.| .++++++++|
T Consensus 403 ~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~p-~~~~v~~~~R 472 (476)
T 2fdv_A 403 KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPK--DIDVSPKHVGFATIP-RNYTMSFLPR 472 (476)
T ss_dssp CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGG--GCCCSCSEESSSEEC-CCCCEEEEEC
T ss_pred CCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCC--CCCccccccceeecC-CceEEEEEec
Confidence 456899999999999999999999999999999999999887653 122333 45667777 4777777766
No 12
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=3.2e-63 Score=468.00 Aligned_cols=325 Identities=28% Similarity=0.414 Sum_probs=251.3
Q ss_pred CCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccch
Q 044178 35 SQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKF 114 (366)
Q Consensus 35 ~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~ 114 (366)
..+.||||+++|++||+.++..++++..+.+++++||+||++++++.++++++||+.+++|+.++...|++++.......
T Consensus 9 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~ 88 (477)
T 1r9o_A 9 RGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER 88 (477)
T ss_dssp CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT
T ss_pred CCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh
Confidence 34578999999999999887335788999999999999999999999999999999999999776666776543322221
Q ss_pred hccCCCceEecCCChhHHHHHHHHHhhhcchh--hhhhhhhhHHHHHHH-------------------------------
Q 044178 115 TSYDYTNIGLAPYGSYWRQLRRICTVELLSTK--RVQSFRSIREEEVSN------------------------------- 161 (366)
Q Consensus 115 ~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~--~~~~~~~~~~~~~~~------------------------------- 161 (366)
.. .+.++.+. +|+.|+++|+++ .+.|+.. ..+.+.+.+.++++.
T Consensus 89 ~~-~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~ 165 (477)
T 1r9o_A 89 AN-RGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSII 165 (477)
T ss_dssp TT-CTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHH
T ss_pred cc-CCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHH
Confidence 11 23444444 699999999864 2222211 000000000000000
Q ss_pred --------------------------------------------------------------------------------
Q 044178 162 -------------------------------------------------------------------------------- 161 (366)
Q Consensus 162 -------------------------------------------------------------------------------- 161 (366)
T Consensus 166 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d 245 (477)
T 1r9o_A 166 FHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQD 245 (477)
T ss_dssp HSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCS
T ss_pred ccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchH
Confidence
Q ss_pred ----HHhh----------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHh
Q 044178 162 ----LIKT----------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAI 215 (366)
Q Consensus 162 ----l~~~----------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l 215 (366)
+++. ++++||+|||+.+++|++++|++||++|+|+++||++++++++.++.+++
T Consensus 246 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~ 325 (477)
T 1r9o_A 246 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR 325 (477)
T ss_dssp HHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGG
T ss_pred HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChHhh
Confidence 0000 67889999999999999999999999999999999999987778999999
Q ss_pred hcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCC
Q 044178 216 HELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGK 295 (366)
Q Consensus 216 ~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~ 295 (366)
++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++++.. ..
T Consensus 326 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~~-~~ 404 (477)
T 1r9o_A 326 SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNF-KK 404 (477)
T ss_dssp GGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSCB-CC
T ss_pred ccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCCc-Cc
Confidence 99999999999999999999976689999999999999999999999999999999999999999999999765432 24
Q ss_pred CCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCccc-ccceeeecCCceEEeeecC
Q 044178 296 DFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSE-VFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 296 ~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~ 366 (366)
+..|+|||+|+|.|+|++||.+|+++++++|+++|++++.++.+. .+... ..++++.| .++++++++|
T Consensus 405 ~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~p-~~~~~~~~~R 473 (477)
T 1r9o_A 405 SKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKN--LDTTPVVNGFASVP-PFYQLCFIPI 473 (477)
T ss_dssp CTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGG--CCCCCBCCSSSCBC-CCCCEEEEEC
T ss_pred cccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCC--CCccCCcCceeecC-CCeEEEEEEe
Confidence 568999999999999999999999999999999999998776431 12222 34566677 4677777665
No 13
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=4.1e-63 Score=462.90 Aligned_cols=320 Identities=21% Similarity=0.350 Sum_probs=268.4
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
++.+.||||+++|++||++++ ..+++ ++.+++++||+||+++++|.++++++|++.+++++.+++..|+.........
T Consensus 9 ~~~~~pPgp~~~P~iG~~~~~-~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~ 86 (444)
T 2ve3_A 9 NSLPIPPGDFGLPWLGETLNF-LNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRI 86 (444)
T ss_dssp CCCCCCCCCCCBTTTBTHHHH-HHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHH
T ss_pred CCCCCCCCCCCCCccccHHHH-hcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHH
Confidence 566789999999999999888 45677 8889999999999999889999999999999999987655565322111111
Q ss_pred hhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------
Q 044178 114 FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------- 165 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------- 165 (366)
.. +..++.+ .+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 87 ~~--g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~fG~ 162 (444)
T 2ve3_A 87 LL--GPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGE 162 (444)
T ss_dssp HH--CTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred Hh--Ccccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHcCC
Confidence 11 2224433 4699999999997 67788777776666666655555542
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~~~l~~~ 242 (444)
T 2ve3_A 163 KVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLP 242 (444)
T ss_dssp HHHSCTTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHCBCTTSCBCCHH
T ss_pred CcccHHHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHhccccCCCCCCHH
Confidence
Q ss_pred -------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCC
Q 044178 166 -------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLL 238 (366)
Q Consensus 166 -------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~ 238 (366)
++++||+|||+.+++|++++|++||++|+|+++|++.++++. .++.+++++||||+|+|+|+||++|+++..
T Consensus 243 ~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~ 321 (444)
T 2ve3_A 243 ELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLIPPVGGG 321 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHHSCSSCEE
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhcCCCccCc
Confidence 678999999999999999999999999999999999998765 789999999999999999999999999986
Q ss_pred CcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHH
Q 044178 239 LPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPN 318 (366)
Q Consensus 239 ~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e 318 (366)
+|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||++++......++.++|||+|+|.|+|++||.+|
T Consensus 322 -~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e 400 (444)
T 2ve3_A 322 -FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLE 400 (444)
T ss_dssp -EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGGGCCSCHHHHHHH
T ss_pred -cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCCccCccHHHHHHH
Confidence 6999999999999999999999999999999999999999999999976532233456799999999999999999999
Q ss_pred HHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 319 IELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 319 ~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
+++++++++++|++++.++.. .. .....++.|+.++.+++++|
T Consensus 401 ~~~~la~ll~~f~~~~~~~~~---~~--~~~~~~~~~~~~l~v~~~~r 443 (444)
T 2ve3_A 401 MKLFATRLIQQFDWTLLPGQN---LE--LVVTPSPRPKDNLRVKLHSL 443 (444)
T ss_dssp HHHHHHHHHHHEEEEECSSCC---CC--EEESSSEEETTCCEEEEEEC
T ss_pred HHHHHHHHHHhCEEEeCCCCC---cc--eeccccccCCCCceEEEEeC
Confidence 999999999999999876542 22 23456789999999999887
No 14
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=4.2e-63 Score=468.41 Aligned_cols=324 Identities=23% Similarity=0.341 Sum_probs=271.4
Q ss_pred cCCCCCCCCCCCCCcceeeccccC----CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCC
Q 044178 32 KSTSQKLPPGPWRLPLIGNLHQLV----ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRP 107 (366)
Q Consensus 32 ~~~~~~~ppgp~~~P~lG~~~~~~----~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~ 107 (366)
..++.+.+|||++.|+. |++.+. ..+++..+.+|++||||||++++|+.++|+++||+.+++|+.++ ..|++++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCC
Confidence 34567779999988875 776663 23678899999999999999999999999999999999999865 4576665
Q ss_pred ccccc---chhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------
Q 044178 108 LLVSA---KFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------- 165 (366)
Q Consensus 108 ~~~~~---~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------- 165 (366)
..... ......+.++ +..+|+.|+++|+++...+|+.+.++.+.+.++++++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~ 160 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGV-LLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISD 160 (487)
T ss_dssp CCHHHHHHHHHTTCCCCG-GGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHH
T ss_pred CCcHHHHHHHHccccCCC-ccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHH
Confidence 43221 1111123343 455799999999998444688887777776666655554431
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 161 ~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (487)
T 3n9y_A 161 DLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIY 240 (487)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred -----------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 044178 166 -----------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVF 204 (366)
Q Consensus 166 -----------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~ 204 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++
T Consensus 241 i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~ 320 (487)
T 3n9y_A 241 TQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR 320 (487)
T ss_dssp HHHHHHHHHHHCCCCSSCCCHHHHHHHSCSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccchHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhh
Confidence 678999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCC
Q 044178 205 KGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPER 284 (366)
Q Consensus 205 ~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R 284 (366)
++.+.++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.||+||.|.++.+++||||++|+||++|+|||
T Consensus 321 ~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR 399 (487)
T 3n9y_A 321 HQAQGDMATMLQLVPLLKASIKETLRLHPISVTL-QRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTR 399 (487)
T ss_dssp HHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEE-EEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGG
T ss_pred cccccchhhhhhhCHHHHHHHHHHhhhCCccccc-ceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhh
Confidence 8776777999999999999999999999999865 899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeee
Q 044178 285 FLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPV 364 (366)
Q Consensus 285 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 364 (366)
|++++.. ..+..++|||+|+|.|+|++||.+|+++++++|+++|+|++.++. ++......++.|+.+++++++
T Consensus 400 ~l~~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~ 472 (487)
T 3n9y_A 400 WLSKDKN--ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLS-----DVGTTFNLILMPEKPISFTFW 472 (487)
T ss_dssp GTCSCTT--SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCC-----CCCEEESSSEEESSCCCEEEE
T ss_pred cCCCCCC--CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCc-----ccccceeeeecCCCCceeEEE
Confidence 9985542 245689999999999999999999999999999999999987763 233445678899999999998
Q ss_pred cC
Q 044178 365 PH 366 (366)
Q Consensus 365 ~~ 366 (366)
+|
T Consensus 473 ~r 474 (487)
T 3n9y_A 473 PF 474 (487)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 15
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-62 Score=466.24 Aligned_cols=325 Identities=27% Similarity=0.513 Sum_probs=259.7
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
++...+|||+++|++||+.++ .++++..+.+++++|||||++++|+.++++++||+.+++++.++...|++++......
T Consensus 13 ~~lp~~PgP~~~p~~G~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~ 91 (495)
T 2hi4_A 13 KGLKSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTST 91 (495)
T ss_dssp TTCBCCCCCCCBTTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHH
T ss_pred CCCCCCCCCCCCcceeeHHhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHH
Confidence 344445999999999999888 6789999999999999999999999999999999999999987766787765443222
Q ss_pred hhccCCCceEec-CCChhHHHHHHHHHhhhcc---hhhh---h---hhhhhHHHHHHHHHhh------------------
Q 044178 114 FTSYDYTNIGLA-PYGSYWRQLRRICTVELLS---TKRV---Q---SFRSIREEEVSNLIKT------------------ 165 (366)
Q Consensus 114 ~~~~~~~~~~~~-~~~~~w~~~R~~l~~~~~~---~~~~---~---~~~~~~~~~~~~l~~~------------------ 165 (366)
.. .++.++.+. ++|+.|+++|+++. +.|+ ..+. + .+.+.+.++++.+++.
T Consensus 92 ~~-~~~~~l~~~~~~g~~w~~~Rr~~~-~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~ 169 (495)
T 2hi4_A 92 LI-TDGQSLTFSTDSGPVWAARRRLAQ-NALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVV 169 (495)
T ss_dssp TS-TTSCCTTTSSCCSHHHHHHHHHHH-HHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHH
T ss_pred Hh-cCCCCEEEcCCCChHHHHHHHHHH-HHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHH
Confidence 21 123455555 46999999999973 3322 1111 0 2222222222222111
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 170 ~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~ 249 (495)
T 2hi4_A 170 VSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQ 249 (495)
T ss_dssp HHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred ---------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcC
Q 044178 166 ---------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKG 206 (366)
Q Consensus 166 ---------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~ 206 (366)
++++||+|||+.+++|++++|++||++|+|+++||++++++
T Consensus 250 ~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~ 329 (495)
T 2hi4_A 250 DFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGR 329 (495)
T ss_dssp TCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTT
T ss_pred hhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCC
Confidence 56889999999999999999999999999999999999988
Q ss_pred CCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCC
Q 044178 207 KENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFL 286 (366)
Q Consensus 207 ~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l 286 (366)
++.++.+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+
T Consensus 330 ~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl 409 (495)
T 2hi4_A 330 ERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL 409 (495)
T ss_dssp SSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTTSCCGGGGB
T ss_pred CCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcCccCccccc
Confidence 77899999999999999999999999999986689999999999999999999999999999999999999999999999
Q ss_pred CCCCCCC--CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeee
Q 044178 287 NSSIDYR--GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPV 364 (366)
Q Consensus 287 ~~~~~~~--~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 364 (366)
+++++.. ..+..++|||+|+|.|+|++||.+|+++++++++++|++++.++.. .+.....++++.|+..++++++
T Consensus 410 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~~v~~~ 486 (495)
T 2hi4_A 410 TADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVK---VDLTPIYGLTMKHARCEHVQAR 486 (495)
T ss_dssp CTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCC---CCCCCBCSSSCBCCCCCCBEEE
T ss_pred CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCC---CCccccCCceecCCCcceEEEE
Confidence 7553210 1245799999999999999999999999999999999999876642 2233344667777643244444
No 16
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=3e-62 Score=461.62 Aligned_cols=326 Identities=29% Similarity=0.466 Sum_probs=257.6
Q ss_pred CCCCCCCCCCCCcceeeccccCCCC--chHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASL--PHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~--~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
++.+.||||+++|++||+.++.... ++..+.+++++||+|+++++++.++++|+||+.+++++.++...|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 3456899999999999998873333 88999999999999999999999999999999999999877777877654332
Q ss_pred cchhccCCCceEecCCChhHHHHHHHHHhhhcchhhh--hhhhhhHHHHHHHHHhh------------------------
Q 044178 112 AKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRV--QSFRSIREEEVSNLIKT------------------------ 165 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~--~~~~~~~~~~~~~l~~~------------------------ 165 (366)
..... ++.++.+..+|+.|+++|+++ .+.|+...+ ..+.+.+.++++.+++.
T Consensus 89 ~~~~~-~~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 89 FMKMT-KMGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHH-TTCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHhhc-CCCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 22221 123444456799999999987 333322110 11111111111111100
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 167 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 246 (481)
T 3czh_A 167 LIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQL 246 (481)
T ss_dssp HHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence
Q ss_pred ---------------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCH
Q 044178 166 ---------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNE 212 (366)
Q Consensus 166 ---------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~ 212 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++++.++.
T Consensus 247 ~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~ 326 (481)
T 3czh_A 247 PQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSW 326 (481)
T ss_dssp CSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCG
T ss_pred hHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCCh
Confidence 56889999999999999999999999999999999999988778999
Q ss_pred HHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCC
Q 044178 213 AAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDY 292 (366)
Q Consensus 213 ~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~ 292 (366)
+++++||||+|||+|+||++|+++..++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++++.
T Consensus 327 ~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~- 405 (481)
T 3czh_A 327 DDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGY- 405 (481)
T ss_dssp GGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSC-
T ss_pred hhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeCCCCC-
Confidence 9999999999999999999999997668999999999999999999999999999999999999999999999976543
Q ss_pred CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecC-CceEEeeec
Q 044178 293 RGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRK-NDLLLIPVP 365 (366)
Q Consensus 293 ~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~ 365 (366)
...+..++|||+|+|.|+|++||.+|+++++++++++|++++.++.. .+.....+++..|. ..+++++|-
T Consensus 406 ~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~ 476 (481)
T 3czh_A 406 FAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELV---PDLKPRLGMTLQPQPYLICAERRH 476 (481)
T ss_dssp BCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCC---CCCCCCSSSSCCCCCCCBEEEECC
T ss_pred CcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCC---CCcccCCCceecCCceEEEEEecc
Confidence 23567899999999999999999999999999999999999876542 22222345566555 566666653
No 17
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=9.5e-63 Score=462.85 Aligned_cols=323 Identities=21% Similarity=0.343 Sum_probs=271.8
Q ss_pred CCCCCCCCC-CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 33 STSQKLPPG-PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 33 ~~~~~~ppg-p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
.++.+.||| |+++|++||++++ ..+++.++.+++++||+||+++++|+++++|++++.+++++.++...+........
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~-~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~ 85 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSR 85 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhh-ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHH
Confidence 356678999 8999999999999 67899999999999999999999999999999999999999877665554322211
Q ss_pred cchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------
Q 044178 112 AKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------- 165 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------- 165 (366)
... ...+.++.+..+++.|+++|+++ .+.|+...++.+.+.+.+++.++++.
T Consensus 86 ~~~-~~~g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~~~ 163 (461)
T 3i3k_A 86 LTT-PVFGKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLH 163 (461)
T ss_dssp HHH-HHHCTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHT
T ss_pred hhh-hhcCCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHHHc
Confidence 111 11245555666689999999998 66788888777777777776666654
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 164 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~~~~ 243 (461)
T 3i3k_A 164 GKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYK 243 (461)
T ss_dssp CHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHHHHHTCBCT
T ss_pred cHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHhhhc
Confidence
Q ss_pred ---------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCC-CCCHHHhhcChhHHHHHHHHh
Q 044178 166 ---------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKE-NVNEAAIHELKFLKLVVKETL 229 (366)
Q Consensus 166 ---------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~-~~~~~~l~~l~~l~a~i~E~l 229 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++.. .++.++++++||++|+++|+|
T Consensus 244 ~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~l 323 (461)
T 3i3k_A 244 DGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETL 323 (461)
T ss_dssp TSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHH
Confidence 6789999999999999999999999999999999999998653 568999999999999999999
Q ss_pred ccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCC
Q 044178 230 RLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRIC 309 (366)
Q Consensus 230 Rl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C 309 (366)
|++|+++.. +|.+.+|++++||.||+|+.|+++.+++|+||++|+||++|+||||++++.. ...+..++|||+|+|.|
T Consensus 324 Rl~p~~~~~-~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~-~~~~~~~~~Fg~G~r~C 401 (461)
T 3i3k_A 324 RLRPPIMIM-MRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPA-SGEKFAYVPFGAGRHRC 401 (461)
T ss_dssp HHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHH-HHSSSSSCTTCCGGGCC
T ss_pred hcCCCcccc-ccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCC-CCCCcceeCCCCCCCCC
Confidence 999999765 7999999999999999999999999999999999999999999999976532 22456899999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeee
Q 044178 310 PGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPV 364 (366)
Q Consensus 310 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 364 (366)
+|++||.+|++++++.++++|||+++++.. +... ....++.|++++.+.-+
T Consensus 402 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~---~~~~-~~~~~~~p~~~~~~~~~ 452 (461)
T 3i3k_A 402 IGENFAYVQIKTIWSTMLRLYEFDLIDGYF---PTVN-YTTMIHTPENPVIRYKR 452 (461)
T ss_dssp SCHHHHHHHHHHHHHHHHHHEEEECSTTCC---CCBC-CSSSSCCBSSCEEEEEE
T ss_pred cCHHHHHHHHHHHHHHHHHhCeEEeCCCCC---CCcc-cceeecCCCCceEEeec
Confidence 999999999999999999999999988753 1222 23556789999888654
No 18
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3.5e-62 Score=459.70 Aligned_cols=315 Identities=26% Similarity=0.447 Sum_probs=255.5
Q ss_pred CCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCccc-CCCCcccccch
Q 044178 36 QKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVF-AQRPLLVSAKF 114 (366)
Q Consensus 36 ~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~-~~~~~~~~~~~ 114 (366)
..+||||+++|++||++++ ..+++.++.++++ |||||++++++.++++|+|++.+++++.++ .| ...........
T Consensus 22 ~eppPgP~~~P~iG~~~~~-~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~ 97 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRL-ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEG 97 (467)
T ss_dssp CBCCEECCCCSTTHHHHHH-HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCCCCCCcccchHHh-ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHH
Confidence 5568899999999999999 6789999999988 999999999999999999999999999866 44 33222211111
Q ss_pred hccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------
Q 044178 115 TSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------- 165 (366)
Q Consensus 115 ~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------- 165 (366)
. .+..++ +..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 98 ~-~g~~~l-~~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g~~ 174 (467)
T 3dbg_A 98 L-LGKEGV-ATANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQ 174 (467)
T ss_dssp --------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSCSS
T ss_pred h-cCCCCc-ccCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhCCc
Confidence 1 111344 445699999999998 77788888888877777777777654
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~dll~~ll~~~~~ 254 (467)
T 3dbg_A 175 YMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEAKDD 254 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCCSSCCSHHHHHTTC---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHhhccC
Confidence
Q ss_pred ---------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhc
Q 044178 166 ---------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLR 230 (366)
Q Consensus 166 ---------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR 230 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++ +.++.+++++||||+|+|+|+||
T Consensus 255 ~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~l~yl~a~i~E~lR 333 (467)
T 3dbg_A 255 NGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVEAMR 333 (467)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhhCHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999876 67899999999999999999999
Q ss_pred cCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCc
Q 044178 231 LHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICP 310 (366)
Q Consensus 231 l~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~ 310 (366)
++|+++.. +|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||++++.. ...+..++|||+|+|.|+
T Consensus 334 l~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~-~~~~~~~~~FG~G~r~C~ 411 (467)
T 3dbg_A 334 LRPAVWVL-TRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAA-NVPKYAMKPFSAGKRKCP 411 (467)
T ss_dssp HSCSCCCE-EEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHT-TSCTTSCCSSCSSSSSCT
T ss_pred cCCCcccc-ceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccc-cCCCccccCCCCCCCCCc
Confidence 99999875 7999999999999999999999999999999999999999999999975433 234568999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 311 GITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 311 G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
|++||.+|+++++++|+++|++++.++.. .....+++++|+ ++.+.+..|
T Consensus 412 G~~lA~~e~~~~la~ll~~f~~~~~~~~~-----~~~~~~~~~~p~-~l~~~~~~~ 461 (467)
T 3dbg_A 412 SDHFSMAQLTLITAALATKYRFEQVAGSN-----DAVRVGITLRPH-DLLVRPVAR 461 (467)
T ss_dssp THHHHHHHHHHHHHHHHHHEEEEECTTCE-----EEEEESSSEEEE-ECEEEEEEC
T ss_pred cHHHHHHHHHHHHHHHHHhceeEeCCCCC-----CccceeeEecCC-CCccchhhh
Confidence 99999999999999999999999987653 344567788888 777776543
No 19
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=9.3e-62 Score=455.15 Aligned_cols=319 Identities=19% Similarity=0.296 Sum_probs=247.6
Q ss_pred CCCCC-CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchh
Q 044178 37 KLPPG-PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFT 115 (366)
Q Consensus 37 ~~ppg-p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~ 115 (366)
++||| |+++|++||+.++ ..+++.++.+++++||+||++++++.++++|+|++.+++++.+++..|+.++........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF-RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH
T ss_pred CCCCCCCCCCCCccCHHHH-hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh
Confidence 57898 8899999999998 678999999999999999999999999999999999999998766667665443222111
Q ss_pred ccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------
Q 044178 116 SYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------ 165 (366)
Q Consensus 116 ~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------ 165 (366)
. +.++ +. +++.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 83 -~-g~~~-~~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 157 (455)
T 2cib_A 83 -F-GEGV-VF-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF 157 (455)
T ss_dssp -H-C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHH
T ss_pred -c-CCcc-cc-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCCc
Confidence 1 2333 23 589999999987 55666655555554444444444432
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~~~~~ 237 (455)
T 2cib_A 158 RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETG 237 (455)
T ss_dssp HTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHCBCTTS
T ss_pred chhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHhhhhcC
Confidence
Q ss_pred --------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhcc
Q 044178 166 --------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRL 231 (366)
Q Consensus 166 --------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl 231 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++++.++.+++++||||+|||+|+||+
T Consensus 238 ~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl 317 (455)
T 2cib_A 238 TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRL 317 (455)
T ss_dssp SBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHHhc
Confidence 567899999999999999999999999999999999999876778999999999999999999999
Q ss_pred CCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCcc
Q 044178 232 HPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPG 311 (366)
Q Consensus 232 ~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G 311 (366)
+|+++.. +|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||++++......+..++|||+|+|.|+|
T Consensus 318 ~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G~r~C~G 396 (455)
T 2cib_A 318 HPPLIIL-MRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396 (455)
T ss_dssp SCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCGGGCCTT
T ss_pred CCccccc-ceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCCCCCCCc
Confidence 9999875 799999999999999999999999999999999999999999999997543211125679999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcc-cccceeeecCCceEEeeecC
Q 044178 312 ITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMS-EVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 312 ~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~ 366 (366)
++||.+|+++++++|+++|++++.++. .+.. .....+..|+.++++++++|
T Consensus 397 ~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~~~~~~~~~~p~~~~~v~~~~R 448 (455)
T 2cib_A 397 AAFAIMQIKAIFSVLLREYEFEMAQPP----ESYRNDHSKMVVQLAQPAAVRYRRR 448 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEESSCG----GGCCEECSSSSCEECSCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHheEEEeCCCc----cccccccccccccCCCCceEEEEEC
Confidence 999999999999999999999986321 1221 11345667888888888876
No 20
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=2e-61 Score=452.45 Aligned_cols=312 Identities=19% Similarity=0.298 Sum_probs=268.7
Q ss_pred CCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcC-CeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 36 QKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHG-PLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 36 ~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
.++||||++ +|++||++++ ..+++.++.+|+++|| +||++++++.++++|+||+.+++++.++...++.++......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 80 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF-GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV 80 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH-HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred CCCCCCCCCCcchhccHHHH-ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence 467899665 9999999998 6789999999999999 999999999999999999999999998777787765443322
Q ss_pred hhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHh-h---------------------------
Q 044178 114 FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIK-T--------------------------- 165 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~--------------------------- 165 (366)
.. .+.++.+..+++.|+++|+++ .+.|+.+.++.+.+.+.+++.++++ .
T Consensus 81 ~~--~g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~~f 157 (450)
T 3gw9_A 81 PV--FGEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLF 157 (450)
T ss_dssp HH--HCTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred HH--hcCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHHHc
Confidence 21 134555555799999999997 7778888888888777777777766 2
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 158 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ 237 (450)
T 3gw9_A 158 GEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSG 237 (450)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSHHHH
T ss_pred CcchhhhhhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchHHHH
Confidence
Q ss_pred ----------------------hhhhccccchHHHHHHHHHHHh--hCHHHHHHHHHHHHHHhcCCCCCCHHHh-hcChh
Q 044178 166 ----------------------DIFVAGSDTSSTSVEWAMAEML--KNPRILKEAQAEVRRVFKGKENVNEAAI-HELKF 220 (366)
Q Consensus 166 ----------------------~~~~ag~~tt~~~l~~~l~~l~--~~p~~~~kl~~Ei~~~~~~~~~~~~~~l-~~l~~ 220 (366)
++++||+|||+.+++|++++|+ .||++|+|+++|++++ ...++.+++ ++|||
T Consensus 238 ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~~~~~~lpy 314 (450)
T 3gw9_A 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNVMDEMPF 314 (450)
T ss_dssp HHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHHHHHHHCHH
T ss_pred HHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChHHHHHhcHH
Confidence 6789999999999999999999 9999999999999987 456789999 99999
Q ss_pred HHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCccc
Q 044178 221 LKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYI 300 (366)
Q Consensus 221 l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~ 300 (366)
|+||++|+||++|+++.. +|.+.+|++++||.||+||.|.++.+++||||++|+||++|+|||+. ..+..++
T Consensus 315 l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~-------~~~~~~~ 386 (450)
T 3gw9_A 315 AERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDE-------KVEGAFI 386 (450)
T ss_dssp HHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC-------SSTTCCC
T ss_pred HHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCc-------CCCCcee
Confidence 999999999999999876 79999999999999999999999999999999999999999999931 1356899
Q ss_pred ccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecC-CceEEeeecC
Q 044178 301 PFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRK-NDLLLIPVPH 366 (366)
Q Consensus 301 ~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 366 (366)
|||+|+|.|+|++||.+|+++++++++++|||++.++.. ++.. ....++.|+ .++++++++|
T Consensus 387 ~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~---~~~~~~~p~~~~~~v~~~~R 449 (450)
T 3gw9_A 387 GFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEV-PDPD---YHTMVVGPTASQCRVKYIRR 449 (450)
T ss_dssp TTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSC-CCEE---TTSSSCEECGGGCEEEEEEC
T ss_pred CCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCC-CCCc---cccceecCCCCceEeEeeec
Confidence 999999999999999999999999999999999976532 1111 234577888 8999999887
No 21
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=7e-61 Score=453.68 Aligned_cols=328 Identities=22% Similarity=0.319 Sum_probs=249.3
Q ss_pred cCCCCCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCc-ccCCCCcc
Q 044178 32 KSTSQKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDL-VFAQRPLL 109 (366)
Q Consensus 32 ~~~~~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~-~~~~~~~~ 109 (366)
..+..+.||||++ +|++||++++ ..+++.++.+++++||+||++++++.++++|+||+.+++++.++.. .+......
T Consensus 8 ~~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~ 86 (491)
T 3dax_A 8 RRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA 86 (491)
T ss_dssp CCCCTTCCCEEEEEESCTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH
T ss_pred hccCCCCCCcCCCcccchhhHHHH-hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH
Confidence 3345578899988 8999999998 6789999999999999999999999999999999999999976542 22221111
Q ss_pred cccchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHh-------------------------
Q 044178 110 VSAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIK------------------------- 164 (366)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------- 164 (366)
...... +.+.....+++.|+++|+.+ .+.|+.+.++.+.+.+.+++.++++
T Consensus 87 ~~~~~~---g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i 162 (491)
T 3dax_A 87 TSAKAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVM 162 (491)
T ss_dssp HHHHHH---TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHH
T ss_pred HHHHHc---CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHH
Confidence 111111 22322133477788777664 2233333222221111111111000
Q ss_pred ----------------------------h---------------------------------------------------
Q 044178 165 ----------------------------T--------------------------------------------------- 165 (366)
Q Consensus 165 ----------------------------~--------------------------------------------------- 165 (366)
.
T Consensus 163 ~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ 242 (491)
T 3dax_A 163 FEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISL 242 (491)
T ss_dssp HHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTSHHHHTTCBSCCHHHHH
T ss_pred HHHhHHHHcCcccccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHhhcccchhHHHHH
Confidence 0
Q ss_pred ---------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCC----------CCCHHH
Q 044178 166 ---------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKE----------NVNEAA 214 (366)
Q Consensus 166 ---------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~----------~~~~~~ 214 (366)
++++||+|||+.+++|++++|++||++|+|+++||++++++.+ .++.++
T Consensus 243 ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~ 322 (491)
T 3dax_A 243 RMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAE 322 (491)
T ss_dssp HHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHH
T ss_pred HHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHH
Confidence 5688999999999999999999999999999999999987543 368999
Q ss_pred hhcChhHHHHHHHHhccCCCCCCCCcccccCCcee----cceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCC
Q 044178 215 IHELKFLKLVVKETLRLHPPAPLLLPRESRESCEI----NGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSI 290 (366)
Q Consensus 215 l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l----~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~ 290 (366)
+++||||+||++|+||++|+ +.. +|.+.+|+++ +||.||+||.|.++.+++|+||++|+||++|+||||+++++
T Consensus 323 l~~lpyl~a~i~E~lRl~p~-~~~-~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~ 400 (491)
T 3dax_A 323 LNDLPVLDSIIKESLRLSSA-SLN-IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENG 400 (491)
T ss_dssp HHCCHHHHHHHHHHHHHHEE-ECE-EEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTTS
T ss_pred HhcCHHHHHHHHHHHhcCCC-ccc-eeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCccccCCCc
Confidence 99999999999999999975 554 7999999999 78999999999999999999999999999999999997543
Q ss_pred CCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC-CCCCCcccccceeeecCCceEE
Q 044178 291 DYR--------GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMK-QDHLDMSEVFGLTIRRKNDLLL 361 (366)
Q Consensus 291 ~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~ 361 (366)
... ..+..|+|||+|+|+|+|++||.+|+++++++||++|||++.++.. +.+++.......+++|++++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 480 (491)
T 3dax_A 401 KTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEF 480 (491)
T ss_dssp SBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEE
T ss_pred cccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceE
Confidence 211 2356899999999999999999999999999999999999877642 1222211122336799999999
Q ss_pred eeecC
Q 044178 362 IPVPH 366 (366)
Q Consensus 362 ~~~~~ 366 (366)
++|.+
T Consensus 481 ~~r~~ 485 (491)
T 3dax_A 481 KYKFK 485 (491)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99864
No 22
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=3.2e-60 Score=446.39 Aligned_cols=315 Identities=23% Similarity=0.422 Sum_probs=254.5
Q ss_pred CCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccch-h
Q 044178 37 KLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKF-T 115 (366)
Q Consensus 37 ~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~-~ 115 (366)
+.||||+++|++||+.++..++++..+.+|+++|||||++++++.++++|+|++.+++|+.+. .|..... ..... .
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 457999999999999998545788899999999999999999999999999999999999642 2432111 11111 1
Q ss_pred ccCCCceEec-CCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------
Q 044178 116 SYDYTNIGLA-PYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------- 165 (366)
Q Consensus 116 ~~~~~~~~~~-~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------- 165 (366)
...+.++.+. .+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~f 158 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGF 158 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHc
Confidence 1113444444 4799999999997 56676665555544444444333321
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 159 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~dll~~ll 238 (470)
T 2ij2_A 159 NYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHML 238 (470)
T ss_dssp SCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHH
T ss_pred CCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Confidence
Q ss_pred ---------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHH
Q 044178 166 ---------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLV 224 (366)
Q Consensus 166 ---------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~ 224 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++ +.++.+++++||||+||
T Consensus 239 ~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~a~ 317 (470)
T 2ij2_A 239 NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQVKQLKYVGMV 317 (470)
T ss_dssp HCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHHHTCHHHHHH
T ss_pred hccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHHHHhCCHHHHHH
Confidence 67889999999999999999999999999999999999876 45899999999999999
Q ss_pred HHHHhccCCCCCCCCcccccCCceecc-eeeCCCCEEeecchhhhcCCCCC-CCCCCcCCCCCCCCCCCCCCCCCccccc
Q 044178 225 VKETLRLHPPAPLLLPRESRESCEING-YAIPENTRIIVNAWAIGRDPSYW-SEAEALYPERFLNSSIDYRGKDFEYIPF 302 (366)
Q Consensus 225 i~E~lRl~~~~~~~~~R~~~~d~~l~g-~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~F 302 (366)
|+|+||++|+++.. +|.+.+|++++| |.||+||.|.++.+++||||++| +||++|+|||| ++ .. ...+..++||
T Consensus 318 i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~~-~~~~~~~~pF 393 (470)
T 2ij2_A 318 LNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-PS-AIPQHAFKPF 393 (470)
T ss_dssp HHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-GG-GSCTTSCCTT
T ss_pred HHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-CC-cCCCccccCC
Confidence 99999999999986 699999999999 99999999999999999999999 99999999999 32 11 1234679999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 303 GAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 303 g~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
|+|+|.|+|++||.+|+++++++|+++|+++ .+.. .++.....+++.|+ ++++++++|
T Consensus 394 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~-~~~~----~~~~~~~~~~~~p~-~~~v~~~~R 451 (470)
T 2ij2_A 394 GNGQRACIGQQFALHEATLVLGMMLKHFDFE-DHTN----YELDIKETLTLKPE-GFVVKAKSK 451 (470)
T ss_dssp CCGGGSCTTHHHHHHHHHHHHHHHHHHEEEE-CTTC----CCCCEEESSSEEET-TCEEEEEEC
T ss_pred CCCCCcCCcHHHHHHHHHHHHHHHHHHeeEe-eCCC----CccccccceEecCC-CeEEEEEEc
Confidence 9999999999999999999999999999998 2221 12333345678888 888888876
No 23
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.1e-59 Score=441.38 Aligned_cols=299 Identities=24% Similarity=0.413 Sum_probs=253.4
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc--chh--ccCCCceEecCCChhH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA--KFT--SYDYTNIGLAPYGSYW 131 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~w 131 (366)
++.+++.+.+|+++|||||++++++.++++|+||+.+++++.+ ..+..++..... ... ...+.++.+..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4568899999999999999999999999999999999999964 234433221111 000 1123455555579999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------------------
Q 044178 132 RQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------------------- 165 (366)
Q Consensus 132 ~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------------------- 165 (366)
+++|+++ .+.|+.+.++.+.+.+.++++.+++.
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 165 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ 165 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence 9999997 67888888777776666666555542
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~ 245 (456)
T 3mdm_A 166 AVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEGLL 245 (456)
T ss_dssp HHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTSSCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcCCCCCHHHHH
Confidence
Q ss_pred ----hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcc
Q 044178 166 ----DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPR 241 (366)
Q Consensus 166 ----~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R 241 (366)
++++||+|||+.+++|++++|++||++|+|+++|+++++++.+.++.+++++||||+|||+|+||++|+++.. +|
T Consensus 246 ~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~r 324 (456)
T 3mdm_A 246 DNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGT-FR 324 (456)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSSCCE-EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCcccc-cc
Confidence 6789999999999999999999999999999999999999888999999999999999999999999999976 69
Q ss_pred cccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 044178 242 ESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIEL 321 (366)
Q Consensus 242 ~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 321 (366)
.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||+++.. .....++|||+|+|.|+|++||.+|+++
T Consensus 325 ~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~---~~~~~~~pFg~G~r~C~G~~lA~~e~~~ 401 (456)
T 3mdm_A 325 LLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP---KPRFTYFPFSLGHRSCIGQQFAQMEVKV 401 (456)
T ss_dssp EECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC---CCSSSCCTTCCGGGSCTTHHHHHHHHHH
T ss_pred ccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC---CCCCcccCCCCCCcCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997642 2456899999999999999999999999
Q ss_pred HHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 322 PLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 322 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++++|+++|+|++.++.. +.. ....++.|+.++++++++|
T Consensus 402 ~la~ll~~f~~~~~~~~~---~~~--~~~~~~~p~~~~~~~~~~r 441 (456)
T 3mdm_A 402 VMAKLLQRLEFRLVPGQR---FGL--QEQATLKPLDPVLCTLRPR 441 (456)
T ss_dssp HHHHHHHHEEEEECTTCC---CCE--EESSSEEESSCCEEEEEEC
T ss_pred HHHHHHHhCeEEeCCCCc---cee--ecceEEecCCCeEEEEEEc
Confidence 999999999999987643 222 3456889999999998876
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1.2e-60 Score=451.95 Aligned_cols=327 Identities=22% Similarity=0.324 Sum_probs=269.9
Q ss_pred ccCCCCCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCc-ccCCCCc
Q 044178 31 TKSTSQKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDL-VFAQRPL 108 (366)
Q Consensus 31 ~~~~~~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~-~~~~~~~ 108 (366)
.+++..+.||||++ +|++||++++ ..+++.++.+++++|||||++++++.++++|+||+.+++++.++.. .++.+..
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~-~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~ 85 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF 85 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHH-hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence 34456778999999 6999999999 7899999999999999999999999999999999999999975542 2333222
Q ss_pred ccccchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHh----------h-------------
Q 044178 109 LVSAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIK----------T------------- 165 (366)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----------~------------- 165 (366)
....... +.+.....+|+.|+++|+.+ .+.|+.+.++.+.+.+.+++.++++ .
T Consensus 86 ~~~~~~~---g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3v8d_A 86 ALSAKAF---GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp HHHHHHH---TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred HHHHHhc---CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence 2122222 22333334599999999986 7788888888888888777777765 1
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 162 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~d~l~ 241 (491)
T 3v8d_A 162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELIS 241 (491)
T ss_dssp HHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCBSCCHHHH
T ss_pred HHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHH
Confidence
Q ss_pred ----------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCC----------CCCCHH
Q 044178 166 ----------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGK----------ENVNEA 213 (366)
Q Consensus 166 ----------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~----------~~~~~~ 213 (366)
.+++||++||+.+++|++++|++||++|+++++||++++++. ..++.+
T Consensus 242 ~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~ 321 (491)
T 3v8d_A 242 LRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQA 321 (491)
T ss_dssp HHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHH
T ss_pred HHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHH
Confidence 678999999999999999999999999999999999998643 457899
Q ss_pred HhhcChhHHHHHHHHhccCCCCCCCCcccccCCcee----cceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCC
Q 044178 214 AIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEI----NGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSS 289 (366)
Q Consensus 214 ~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l----~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~ 289 (366)
+++++|||+++++|+||++|+ +.. +|.+.+|+++ +||.||+|+.|.++.+++|+||++|+||++|+||||++++
T Consensus 322 ~l~~~~~l~a~i~E~lRl~p~-~~~-~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~~~~~ 399 (491)
T 3v8d_A 322 ELNDLPVLDSIIKESLRLSSA-SLN-IRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDEN 399 (491)
T ss_dssp HHHCCHHHHHHHHHHHHHHEE-ECE-EEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTT
T ss_pred HHhcChHHHHHHHHHhhcCCC-Ccc-ceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCcccccCCC
Confidence 999999999999999999974 444 6999999999 9999999999999999999999999999999999999765
Q ss_pred CCCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC-CCCCCcccccceeeecCCceE
Q 044178 290 IDYR--------GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMK-QDHLDMSEVFGLTIRRKNDLL 360 (366)
Q Consensus 290 ~~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~ 360 (366)
+... ..+..|+|||+|+|.|+|++||.+|++++++.|+++|||++.++.. .+.++.......+++|+++|+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~ 479 (491)
T 3v8d_A 400 GKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIE 479 (491)
T ss_dssp SSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCE
T ss_pred CCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeE
Confidence 4311 1356789999999999999999999999999999999999987743 233444334455779999999
Q ss_pred Eeee
Q 044178 361 LIPV 364 (366)
Q Consensus 361 ~~~~ 364 (366)
++++
T Consensus 480 v~~~ 483 (491)
T 3v8d_A 480 FKYK 483 (491)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 25
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=1e-58 Score=439.60 Aligned_cols=325 Identities=18% Similarity=0.251 Sum_probs=241.4
Q ss_pred CCCCCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 33 STSQKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 33 ~~~~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
.+..+.||||++ +|++||++++ ..+++.++.+|++||||||++++++.++++++||+.+++++.++...++.+.....
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 92 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDF-GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF 92 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHh-ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence 355678999998 8999999998 56789999999999999999999999999999999999999765532333221111
Q ss_pred cchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhh----------------------------------------
Q 044178 112 AKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSF---------------------------------------- 151 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~---------------------------------------- 151 (366)
... ...+.+.. ..+++.|++.++. .|+.+.++.+
T Consensus 93 ~~~-~~~g~~~~-~~~~~~~rr~~~~----~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~ 166 (498)
T 3b6h_A 93 LME-RIFDVQLP-HYSPSDEKARMKL----TLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAG 166 (498)
T ss_dssp HHH-HTSCCCCT-TCCHHHHHHHHHT----TSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHH
T ss_pred HHH-HHcCCCcc-ccCHHHHHHHHHH----hhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHH
Confidence 100 01122222 3346677643221 0100000000
Q ss_pred ------------------------hhhHHH----------------------HH----HHHH------------------
Q 044178 152 ------------------------RSIREE----------------------EV----SNLI------------------ 163 (366)
Q Consensus 152 ------------------------~~~~~~----------------------~~----~~l~------------------ 163 (366)
...+.. .. ..+.
T Consensus 167 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l 246 (498)
T 3b6h_A 167 YLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRSKWL 246 (498)
T ss_dssp HHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHHHTTCBSCCHHH
T ss_pred HHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhccccHHHHH
Confidence 000000 00 0000
Q ss_pred hh--------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCC-------CCCHHHhh
Q 044178 164 KT--------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKE-------NVNEAAIH 216 (366)
Q Consensus 164 ~~--------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~-------~~~~~~l~ 216 (366)
+. .+++||++||+.+++|++++|++||++|+|+++|+++++++.+ .++.++++
T Consensus 247 ~~ll~~~~~~~~~~~~~~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~ 326 (498)
T 3b6h_A 247 ESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLD 326 (498)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHHHHh
Confidence 00 5678999999999999999999999999999999999998654 25899999
Q ss_pred cChhHHHHHHHHhccCCCCCCCCcccccCCcee-----cceeeCCCCEEeecchh-hhcCCCCCCCCCCcCCCCCCCCCC
Q 044178 217 ELKFLKLVVKETLRLHPPAPLLLPRESRESCEI-----NGYAIPENTRIIVNAWA-IGRDPSYWSEAEALYPERFLNSSI 290 (366)
Q Consensus 217 ~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l-----~g~~ip~g~~v~~~~~~-~~~d~~~~~dp~~F~P~R~l~~~~ 290 (366)
+||||+||++|+||++|+ +.. +|.+.+|+++ +||.||+||.|.++.++ +|+||++|+||++|+||||+++++
T Consensus 327 ~lpyl~a~i~E~lRl~p~-~~~-~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~ 404 (498)
T 3b6h_A 327 STPVLDSVLSESLRLTAA-PFI-TREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDG 404 (498)
T ss_dssp SCHHHHHHHHHHHHHHBC-BCE-EEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTS
T ss_pred cCHHHHHHHHHHHhccCC-Ccc-eeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccCCCc
Confidence 999999999999999975 554 7999999998 68999999999999999 999999999999999999997543
Q ss_pred CCC--------CCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC-CCCCCcccccceeeecCCceEE
Q 044178 291 DYR--------GKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMK-QDHLDMSEVFGLTIRRKNDLLL 361 (366)
Q Consensus 291 ~~~--------~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~ 361 (366)
... ..+..++|||+|+|+|||++||.+|+++++++||++|||++.++.. .+.++.......+++|++++++
T Consensus 405 ~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 484 (498)
T 3b6h_A 405 SEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPV 484 (498)
T ss_dssp SBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEE
T ss_pred ccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccE
Confidence 211 1356799999999999999999999999999999999999877642 1222211123345688899999
Q ss_pred eeecC
Q 044178 362 IPVPH 366 (366)
Q Consensus 362 ~~~~~ 366 (366)
++++|
T Consensus 485 ~~~~~ 489 (498)
T 3b6h_A 485 RYRIR 489 (498)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 88876
No 26
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=1.2e-58 Score=436.66 Aligned_cols=321 Identities=17% Similarity=0.227 Sum_probs=233.8
Q ss_pred CCCCCCCCCCCC-CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc
Q 044178 33 STSQKLPPGPWR-LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS 111 (366)
Q Consensus 33 ~~~~~~ppgp~~-~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~ 111 (366)
+++.+.||||++ +|++||++++ ..+++.++.+++++|||||++++++.++++|+|++.+++++.++.. ++.......
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~ 91 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEF-GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQV 91 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHH-hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHH
Confidence 345678999998 9999999998 6789999999999999999999999999999999999999986542 332211110
Q ss_pred cchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHh---------------------------
Q 044178 112 AKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIK--------------------------- 164 (366)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------------------------- 164 (366)
... ...+.+.. ..+++.|++..+ +.|+.+.++.+.+.+.+++.++++
T Consensus 92 ~~~-~~~g~~~~-~~~~~~~R~~~~----~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (475)
T 3b98_A 92 LMK-RIFNMILP-SHNPESEKKRAE----MHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKT 165 (475)
T ss_dssp HHH-HTTCCCCT-TCCHHHHHHHHH----HHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHH
T ss_pred HHH-HHhCCCCC-CCChHHHHHHHH----HHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHH
Confidence 000 01122322 334677764321 112221111111111111111000
Q ss_pred -------------------------------------------------------h------------------------
Q 044178 165 -------------------------------------------------------T------------------------ 165 (366)
Q Consensus 165 -------------------------------------------------------~------------------------ 165 (366)
.
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 245 (475)
T 3b98_A 166 GYLTVFGAENNNSAALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSWLGSYVKQLQ 245 (475)
T ss_dssp HHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSCTTSCCCCCTTSHHHHHHHHHH
T ss_pred hhhheeCCccccchhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 0
Q ss_pred --------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhcc
Q 044178 166 --------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRL 231 (366)
Q Consensus 166 --------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl 231 (366)
.+++||+|||+.+++|++++|++||++|+|+++|++. + ...++.+++++||||+|+|+|+||+
T Consensus 246 ~~~~~~~~~i~~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~~--~-~~~~~~~~~~~lpyl~a~i~E~lRl 322 (475)
T 3b98_A 246 DEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQG--G-KHLRLEERQKNTPVFDSVLWETLRL 322 (475)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC---------------CCHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHhc--C-CCCCCHHHHhcCHHHHHHHHHHHhc
Confidence 5678999999999999999999999999999999982 2 2346899999999999999999999
Q ss_pred CCCCCCCCcccccCCcee-----cceeeCCCCEEeecchh-hhcCCCCCCCCCCcCCCCCCCCCCCC--------CCCCC
Q 044178 232 HPPAPLLLPRESRESCEI-----NGYAIPENTRIIVNAWA-IGRDPSYWSEAEALYPERFLNSSIDY--------RGKDF 297 (366)
Q Consensus 232 ~~~~~~~~~R~~~~d~~l-----~g~~ip~g~~v~~~~~~-~~~d~~~~~dp~~F~P~R~l~~~~~~--------~~~~~ 297 (366)
+|+ +.. +|.+.+|+++ +||.||+|+.|.++.++ +||||++|+||++|+||||+++++.. ...+.
T Consensus 323 ~p~-~~~-~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~ 400 (475)
T 3b98_A 323 TAA-ALI-TRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKY 400 (475)
T ss_dssp HEE-ECE-EEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCCCCBSSSCBCSC
T ss_pred CCc-cce-eEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCcccccccccccccc
Confidence 986 654 7999999999 89999999999999999 99999999999999999999754321 11346
Q ss_pred cccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCC-CCCCCcccccceeeecCCceEEeeecC
Q 044178 298 EYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMK-QDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 298 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.++|||+|+|.|+|++||.+|+++++++|+++|+|+++++.. .+.++.......+++|+.++++++++|
T Consensus 401 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R 470 (475)
T 3b98_A 401 PSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIR 470 (475)
T ss_dssp SCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC
T ss_pred CccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEec
Confidence 799999999999999999999999999999999999977642 111121112334678999999999987
No 27
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=4.5e-55 Score=406.88 Aligned_cols=296 Identities=21% Similarity=0.232 Sum_probs=226.8
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA 112 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~ 112 (366)
+.++.||||+++|++||+......+++.++.++ ++||||+++++ ++.++++++|++.+++++.++ .|++++.....
T Consensus 23 ~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 99 (436)
T 2cd8_A 23 RTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTT 99 (436)
T ss_dssp -----------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSS
T ss_pred hhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccc
Confidence 345668999999999998632256899999999 99999999998 788999999999999999865 46655431111
Q ss_pred chh---ccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------
Q 044178 113 KFT---SYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------ 165 (366)
Q Consensus 113 ~~~---~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------ 165 (366)
... ...+.++. ..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 100 ~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi 177 (436)
T 2cd8_A 100 PLTEAEAALNHNML-ESDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVI 177 (436)
T ss_dssp CCCTTGGGTCCSGG-GCCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHH
T ss_pred cccccccccccccc-ccCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 110 11234443 45699999999997 67787776665555544444433321
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 178 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~ 257 (436)
T 2cd8_A 178 SELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMA 257 (436)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHSCSSTTHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHCTTTSCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhhhccCCCCCHHHHHHHH
Confidence
Q ss_pred -hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCccccc
Q 044178 166 -DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESR 244 (366)
Q Consensus 166 -~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~ 244 (366)
++++||+|||+.+++|++++|++||++|+|+++|+ .|++|||+|+||++|+++..++|.+.
T Consensus 258 ~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~ 319 (436)
T 2cd8_A 258 HILLVAGHETTVNLIANGMYALLSHPDQLAALRADM------------------TLLDGAVEEMLRYEGPVESATYRFPV 319 (436)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBSSCCCBEES
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh------------------hhHHHHHHHHHHhcCcccCceeEEeC
Confidence 57889999999999999999999999999999974 36899999999999999955589999
Q ss_pred CCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHH
Q 044178 245 ESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLA 324 (366)
Q Consensus 245 ~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 324 (366)
+|++++||.||+|+.|.++.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|++++++
T Consensus 320 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~~pFG~G~r~C~G~~lA~~e~~~~la 389 (436)
T 2cd8_A 320 EPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT----------AGHLAFGHGIHFCIGAPLARLEARIAVR 389 (436)
T ss_dssp SCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCCTTHHHHHHHHHHHHH
T ss_pred CCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999951 3689999999999999999999999999
Q ss_pred HHHHhc-eeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 325 QLLFHF-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 325 ~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.|+++| ++++..+.. ++... ...++++..++.+++++|
T Consensus 390 ~ll~~f~~~~~~~~~~--~~~~~--~~~~~~~~~~l~v~~~~r 428 (436)
T 2cd8_A 390 ALLERCPDLALDVSPG--ELVWY--PNPMIRGLKALPIRWRRG 428 (436)
T ss_dssp HHHHSCTTCCBCSCGG--GCCBC--CCTTBCCBSCCEEC----
T ss_pred HHHHhCCCceecCCCc--cceec--cCcccCCcceeEEEEecC
Confidence 999999 699864321 23332 234556777888887775
No 28
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=3.7e-54 Score=399.15 Aligned_cols=291 Identities=17% Similarity=0.236 Sum_probs=239.9
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcC-CeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceE
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHG-PLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIG 123 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (366)
.|++||+.++ ..+++.++.+++++|| |||+++++|.+++++++++.++.++. . ..|+..............+.+..
T Consensus 8 ~P~lG~~~~~-~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l 84 (417)
T 1izo_A 8 DKSLDNSLTL-LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAI 84 (417)
T ss_dssp CCCTTHHHHH-HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCG
T ss_pred CCccchHHHH-hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhccccce
Confidence 4999999998 6789999999999999 89999999999999999999985543 2 33543322111000011122223
Q ss_pred ecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------------
Q 044178 124 LAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------------- 165 (366)
Q Consensus 124 ~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------------- 165 (366)
+..+|+.|+++|+++ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 85 ~~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~~G~~~~~~~~~~~~ 163 (417)
T 1izo_A 85 QGMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERA 163 (417)
T ss_dssp GGCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHHHH
T ss_pred eecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHcCCCCCchHHHHHH
Confidence 455699999999997 77888888888877777777666653
Q ss_pred --------------------------------------------------------------------------hhhhcc
Q 044178 166 --------------------------------------------------------------------------DIFVAG 171 (366)
Q Consensus 166 --------------------------------------------------------------------------~~~~ag 171 (366)
..+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~l~~~~~~~~~~~~~ag 243 (417)
T 1izo_A 164 DDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRP 243 (417)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCCccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHHHhccccCCCCCHHHHHHHHHHHHhh
Confidence 235689
Q ss_pred ccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecc
Q 044178 172 SDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEING 251 (366)
Q Consensus 172 ~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g 251 (366)
++||+.+++|++++|++||++|+++++| +++|++++|+|+||++|+++.. +|.+.+|++++|
T Consensus 244 ~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g 305 (417)
T 1izo_A 244 IVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPFL-GALVKKDFVWNN 305 (417)
T ss_dssp HHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHHHHHHSCCCCEE-EEEECSCEEETT
T ss_pred hhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHHHHhhcCCccccc-ceeecCCeeECC
Confidence 9999999999999999999999999986 4799999999999999999985 799999999999
Q ss_pred eeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCC----CCCCccHHHHHHHHHHHHHHHH
Q 044178 252 YAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAG----RRICPGITFAIPNIELPLAQLL 327 (366)
Q Consensus 252 ~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~e~~~~l~~ll 327 (366)
|.||+|+.|.++.+++||||++|+||++|+||||++++ ..+..++|||+| +|.|+|++||.+|+++++++++
T Consensus 306 ~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll 381 (417)
T 1izo_A 306 CEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE----ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLV 381 (417)
T ss_dssp EEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC----CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHHHHHHH
T ss_pred EEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC----CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999753 245689999999 5999999999999999999999
Q ss_pred HhceeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 328 FHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 328 ~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++|+|++.++. .... ...++++|+.|+++++++|
T Consensus 382 ~~~~~~~~~~~----~~~~-~~~~~~~p~~~~~~~~~~r 415 (417)
T 1izo_A 382 HQIEYDVPEQS----LHYS-LARMPSLPESGFVMSGIRR 415 (417)
T ss_dssp HTEEEECCSCC----CCCC-SSSSSCCCTTCCEEEEEEE
T ss_pred HhCeEEeCCCC----cCcc-cccCCCCCCCCceEeeeeC
Confidence 99999987643 2222 2356789999999999876
No 29
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=9.2e-55 Score=399.42 Aligned_cols=287 Identities=21% Similarity=0.308 Sum_probs=235.3
Q ss_pred CCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCC-cccccchhccCC
Q 044178 41 GPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRP-LLVSAKFTSYDY 119 (366)
Q Consensus 41 gp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~-~~~~~~~~~~~~ 119 (366)
+++.+|++||+.++ ..+++.++.+++++||||++ ++++.++++++||+.+++++.++ .|++++ ........ . +
T Consensus 3 ~~~~~p~iGnl~~~-~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~-~-g 76 (389)
T 1n97_A 3 RLSLREAWPYLKDL-QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRL-T-G 76 (389)
T ss_dssp ECCHHHHHHHHHHH-HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHH-H-C
T ss_pred ccccccccccHHHH-hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHH-h-C
Confidence 45668999999988 56899999999999999999 99999999999999999999865 676654 22111111 1 2
Q ss_pred CceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------
Q 044178 120 TNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------- 165 (366)
Q Consensus 120 ~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------- 165 (366)
.++.+ .+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 77 ~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~~~~ 154 (389)
T 1n97_A 77 RGLLT-DWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLA 154 (389)
T ss_dssp SSTTT-CCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCHHHH
T ss_pred Ccccc-CCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence 44443 4699999999997 66676655444433333322222211
Q ss_pred --------------------------------------------------------------hhhhccccchHHHHHHHH
Q 044178 166 --------------------------------------------------------------DIFVAGSDTSSTSVEWAM 183 (366)
Q Consensus 166 --------------------------------------------------------------~~~~ag~~tt~~~l~~~l 183 (366)
++++||+|||+.+++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~rll~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l 234 (389)
T 1n97_A 155 EHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHETVASALTWSF 234 (389)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHcCchhHHHHHHHHH
Confidence 457899999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeec
Q 044178 184 AEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVN 263 (366)
Q Consensus 184 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~ 263 (366)
++|++||++|+|+++|++.+. |+++|+||++|+++.. +|.+.+|++++||.||+|+.|.++
T Consensus 235 ~~L~~~P~~~~~l~~E~~~~~------------------a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~ 295 (389)
T 1n97_A 235 LLLSHRPDWQKRVAESEEAAL------------------AAFQEALRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLS 295 (389)
T ss_dssp HHHTTCHHHHHHHHHCHHHHH------------------HHHHHHHHHSCSSCCE-EEEESSCEEETTEEECTTCEEEEC
T ss_pred HHHHcCHHHHHHHHHHHHHHH------------------HHHHHHHhcCCCcccc-ceeeCCCceECCEEeCCCCEEEEC
Confidence 999999999999999998863 9999999999999987 899999999999999999999999
Q ss_pred chhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCCCCCCCC
Q 044178 264 AWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNGMKQDHL 343 (366)
Q Consensus 264 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~ 343 (366)
.+++||| +|+||++|+||||++++ ...+..++|||+|+|.|+|+++|.+|+++++++++++|++++.++..
T Consensus 296 ~~~~~rd--~~~dp~~F~PeR~l~~~---~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~---- 366 (389)
T 1n97_A 296 PYVTQRL--HFPDGEAFRPERFLEER---GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPLPFPR---- 366 (389)
T ss_dssp HHHHHHH--SSTTTTSCCTTHHHHSC---CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCCCCCC----
T ss_pred HHHHhhh--cCCCccccCCccCCCCC---CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeCCCCc----
Confidence 9999999 99999999999998652 12456899999999999999999999999999999999999876643
Q ss_pred CcccccceeeecCCceEEeeecC
Q 044178 344 DMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 344 ~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
. ..+.+++|+.++.+++++|
T Consensus 367 -~--~~~~~~~p~~~~~v~~~~~ 386 (389)
T 1n97_A 367 -V--LAQVTLRPEGGLPARPREE 386 (389)
T ss_dssp -E--EESSSEEETTCCEECCBC-
T ss_pred -c--cceEEeeeCCCceEEEeec
Confidence 1 3467889999999988875
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=5.1e-53 Score=389.94 Aligned_cols=267 Identities=17% Similarity=0.225 Sum_probs=220.1
Q ss_pred CCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC-CeeEEEeCCHHHHHHHHhhCC-cccCCCCcccccch-
Q 044178 38 LPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-EVSTIVVSSQEIAKEVLKTHD-LVFAQRPLLVSAKF- 114 (366)
Q Consensus 38 ~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-~~~~vvv~~~~~v~~il~~~~-~~~~~~~~~~~~~~- 114 (366)
.||||+++|++||+.+ +++..+.+++ +||||+++.++ |.+.++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~ 76 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSAS 76 (404)
T ss_dssp ----CCBSSCCCSSTT----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHH
T ss_pred CCCCCCCCCCCCCcCC----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccccc
Confidence 4899999999999754 7899999996 69999999874 677788999999999998653 22333332221110
Q ss_pred ---hccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------
Q 044178 115 ---TSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------- 165 (366)
Q Consensus 115 ---~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------- 165 (366)
...+..++ +..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 77 ~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~ 154 (404)
T 1jfb_A 77 GKQAAKAKPTF-VDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYII 154 (404)
T ss_dssp HHHHTTSCCCG-GGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHH
T ss_pred ccchhcccCcc-cccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHH
Confidence 11122333 344699999999997 78899888888877777766666543
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 155 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~ei~~~~ 234 (404)
T 1jfb_A 155 YTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSDAVQIA 234 (404)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHhhccCCCCCHHHHHHHH
Confidence
Q ss_pred -hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCccccc
Q 044178 166 -DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESR 244 (366)
Q Consensus 166 -~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~ 244 (366)
++++||+|||+.+++|++++|++||++|+|++++ .+|++|||+|+||++|+++..++|.+.
T Consensus 235 ~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------------------~~yl~a~i~E~lRl~p~~~~~~~R~~~ 296 (404)
T 1jfb_A 235 FLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------PSLAPQFVEELCRYHTASALAIKRTAK 296 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSCCSCCEEEES
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC------------------hHhHHHHHHHHHhhCCCccccceeeeC
Confidence 6789999999999999999999999999999982 379999999999999999965689999
Q ss_pred CCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHH
Q 044178 245 ESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLA 324 (366)
Q Consensus 245 ~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 324 (366)
+|++++||.||+|+.|.++.+++||||++|+||++|+||||+++ ..++|||+|+|.|+|++||.+|++++++
T Consensus 297 ~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~--------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~ 368 (404)
T 1jfb_A 297 EDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP--------QDPLGFGFGDHRCIAEHLAKAELTTVFS 368 (404)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS--------SCCCTTCCGGGSCTTHHHHHHHHHHHHH
T ss_pred CCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC--------CCCCCCCCCCccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999753 1489999999999999999999999999
Q ss_pred HHHHhc-eeecCCC
Q 044178 325 QLLFHF-DWKLPNG 337 (366)
Q Consensus 325 ~ll~~f-~~~~~~~ 337 (366)
+++++| ++++.++
T Consensus 369 ~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 369 TLYQKFPDLKVAVP 382 (404)
T ss_dssp HHHHHCTTCEESSC
T ss_pred HHHHHCCCceecCC
Confidence 999999 7998653
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=5.2e-53 Score=389.75 Aligned_cols=284 Identities=17% Similarity=0.240 Sum_probs=232.7
Q ss_pred CCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEe----c-CC-eeEEEeCCHHHHHHHH-hhCCcccCCCC
Q 044178 35 SQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLK----L-GE-VSTIVVSSQEIAKEVL-KTHDLVFAQRP 107 (366)
Q Consensus 35 ~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~----~-~~-~~~vvv~~~~~v~~il-~~~~~~~~~~~ 107 (366)
..++||||+++|+. + ..+++..+.++ ++||||++++ + ++ .++++++|++.+++++ .++ . +++++
T Consensus 8 ~~~lppgp~~~p~~-----~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~-~~~~~ 78 (406)
T 1ued_A 8 VAPLLREPANFQLR-----T-NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-H-FTTRP 78 (406)
T ss_dssp CCCEEECCTTTTCE-----E-TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-S-EECCC
T ss_pred CCCCcccCcccCCC-----C-CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-c-ccccc
Confidence 35678999999987 4 56899999999 9999999999 7 88 9999999999999999 543 2 44443
Q ss_pred ccccc--chh-c-cCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------
Q 044178 108 LLVSA--KFT-S-YDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------ 165 (366)
Q Consensus 108 ~~~~~--~~~-~-~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------ 165 (366)
..... ... . ..+.++ +..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l-~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~ 156 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFVGQI-STYDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPV 156 (406)
T ss_dssp CC---------CGGGTTCG-GGCCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHH
T ss_pred ccccccccccccccccccc-ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHh
Confidence 21110 010 0 012344 345799999999998 77888888777777776666665543
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 157 ~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~ls~~ei~ 236 (406)
T 1ued_A 157 GAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELK 236 (406)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHH
Confidence
Q ss_pred ----hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcc
Q 044178 166 ----DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPR 241 (366)
Q Consensus 166 ----~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R 241 (366)
++++||+|||+.+++|++++|++||++|+|+++|+. |++|||+|+||++|+++..++|
T Consensus 237 ~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R 298 (406)
T 1ued_A 237 GLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE------------------KAERVVNELVRYLSPVQAPNPR 298 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH------------------HHHHHHHHHHHHHCSSCSCSCE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH------------------HHHHHHHHHHhcCCCcccCcce
Confidence 568899999999999999999999999999999763 5899999999999999975589
Q ss_pred cccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHH
Q 044178 242 ESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIEL 321 (366)
Q Consensus 242 ~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~ 321 (366)
.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|+++
T Consensus 299 ~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~pFG~G~r~C~G~~lA~~e~~~ 368 (406)
T 1ued_A 299 LAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA----------VSDVGFGHGIHYCVGAALARSMLRM 368 (406)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------CCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred ecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC----------CCCCCCCCCCcCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999981 3689999999999999999999999
Q ss_pred HHHHHHHhc-eeecCCCCCCCCCCcccccceeeecCCceEEe
Q 044178 322 PLAQLLFHF-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLI 362 (366)
Q Consensus 322 ~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 362 (366)
++++++++| ++++.++.. ++. .....++++ .++.|+
T Consensus 369 ~la~ll~~f~~~~~~~~~~--~~~--~~~~~~~~~-~~lpv~ 405 (406)
T 1ued_A 369 AYQTLWRRFPGLRLAVPIE--EVK--YRSAFVDCP-DQVPVT 405 (406)
T ss_dssp HHHHHHHHCTTCEESSCGG--GCC--BCCSSSCCB-SCCEEE
T ss_pred HHHHHHHhCCCceecCCcc--ccc--ccccccccC-Ceeeee
Confidence 999999999 799865422 222 233556777 888775
No 32
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=8.9e-54 Score=405.40 Aligned_cols=302 Identities=16% Similarity=0.202 Sum_probs=231.6
Q ss_pred cCCCCCCCCCCCCCcceeeccccC----CCCchHHHHHHHHhcCC-eeEEecCCeeE-------EEeCCHHHHHHHHhhC
Q 044178 32 KSTSQKLPPGPWRLPLIGNLHQLV----ASLPHHSLRDLTQKHGP-LMHLKLGEVST-------IVVSSQEIAKEVLKTH 99 (366)
Q Consensus 32 ~~~~~~~ppgp~~~P~lG~~~~~~----~~~~~~~~~~~~~kyG~-i~~~~~~~~~~-------vvv~~~~~v~~il~~~ 99 (366)
...+.+.||||++||++||+++++ ..+++.++.++++|||+ ||++++++.++ +++.+++..+.++...
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 445778899999999999998885 57899999999999999 99999988888 6667776666555432
Q ss_pred C----cccCCCCcccccchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------
Q 044178 100 D----LVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------- 165 (366)
Q Consensus 100 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------- 165 (366)
. +.+...... .....+.......+..+|+.|+++|+++ .+.|+... +.+.+.+++.++++++.
T Consensus 103 ~v~k~~~~~~~~~~-~~~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~~~~~~~ 179 (495)
T 3dsk_A 103 KVEKKDLLTGTYMP-STELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKELSLKGK 179 (495)
T ss_dssp TEECSSCTTSSSCC-CGGGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cccccccccccCCC-CccccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 1 111111111 1122221112233445699999999997 44455432 44444443333333321
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 180 vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (495)
T 3dsk_A 180 ADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLY 259 (495)
T ss_dssp EESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHHHH
Confidence
Q ss_pred ------------------------------hhhhccccchHHHHHHHHHHHhh-CHHHHHHHHHHHHHHhcCC-CCCCHH
Q 044178 166 ------------------------------DIFVAGSDTSSTSVEWAMAEMLK-NPRILKEAQAEVRRVFKGK-ENVNEA 213 (366)
Q Consensus 166 ------------------------------~~~~ag~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~~~~~-~~~~~~ 213 (366)
.+++||++||+.+++|++++|+. ||++|+++++|+++++++. +.++.+
T Consensus 260 ~~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~ 339 (495)
T 3dsk_A 260 EFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMG 339 (495)
T ss_dssp HHHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHH
Confidence 23489999999999999999995 9999999999999998754 679999
Q ss_pred HhhcChhHHHHHHHHhccCCCCCCCCcccccCCceec----ceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCC
Q 044178 214 AIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEIN----GYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSS 289 (366)
Q Consensus 214 ~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~----g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~ 289 (366)
++++||||+|+|+|+||++|+++... |.+.+|+++. ||.||||+.|+++.+++|+||++|+||++|+||||++++
T Consensus 340 ~~~~lp~l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~~~ 418 (495)
T 3dsk_A 340 AIEKMELTKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEE 418 (495)
T ss_dssp HHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCHHH
T ss_pred HHhcCHHHHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCCCC
Confidence 99999999999999999999999985 7799999994 999999999999999999999999999999999999753
Q ss_pred CCC------CCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhceeecCCC
Q 044178 290 IDY------RGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFDWKLPNG 337 (366)
Q Consensus 290 ~~~------~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~ 337 (366)
+.. -+....+++||+|+|.|+|++||.+|++++++.|+++|++...++
T Consensus 419 ~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 472 (495)
T 3dsk_A 419 GEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV 472 (495)
T ss_dssp HHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence 210 001113455555669999999999999999999999999876543
No 33
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=6.8e-53 Score=390.43 Aligned_cols=292 Identities=16% Similarity=0.242 Sum_probs=236.8
Q ss_pred CCCCCCCcceeeccccCCCCchHHHHHHHHhc-CCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhcc
Q 044178 39 PPGPWRLPLIGNLHQLVASLPHHSLRDLTQKH-GPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSY 117 (366)
Q Consensus 39 ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~ 117 (366)
|||| |++||++++ ..+++.++.+++++| |||+++++++.+++++++++.++ ++.++ ..|+.............
T Consensus 4 pPg~---P~iG~~~~~-~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~ 77 (415)
T 3awm_A 4 TPHT---KGPDETLSL-LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL 77 (415)
T ss_dssp --------CCCCHHHH-HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT
T ss_pred CCCC---CccchHHHH-HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc
Confidence 5665 899999998 578999999999999 79999999899999999999987 66543 34554322111000011
Q ss_pred CCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------
Q 044178 118 DYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------- 165 (366)
Q Consensus 118 ~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------- 165 (366)
.+.+..+..+|+.|+++|+++ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 78 ~g~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~~G~~~~~~ 156 (415)
T 3awm_A 78 LGQGGVQGLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAWAGVPLPDD 156 (415)
T ss_dssp SCSSSGGGCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHHHTCCCCGG
T ss_pred cCCcceeecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHHcCCCCCcc
Confidence 122223445699999999997 78888888887777777766666643
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~~~~~~~~~~~ 236 (415)
T 3awm_A 157 EAGNRAGELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSPHVAAVEL 236 (415)
T ss_dssp GHHHHHHHHHHHHHSTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHhhhhccCCCCCHHHHHHHH
Confidence
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccC
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRE 245 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~ 245 (366)
..+++|++||+.+++|++++|++||++|+++++| ++|++++|+|+||++|+++.. +|.+.+
T Consensus 237 ~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~lRl~p~~~~~-~R~~~~ 297 (415)
T 3awm_A 237 VNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDYAELFVQEVRRFYPFFPAV-VARASQ 297 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTHHHHHHHHHHHHSCCSCEE-EEEESS
T ss_pred HHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHHHHHHHHHHhhcCCCcccc-ceeecC
Confidence 2355899999999999999999999999999985 689999999999999999985 799999
Q ss_pred CceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCC----CCCCccHHHHHHHHHH
Q 044178 246 SCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAG----RRICPGITFAIPNIEL 321 (366)
Q Consensus 246 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G----~r~C~G~~~A~~e~~~ 321 (366)
|++++||.||+|+.|.++.+++||||++|+||++|+||||++++ ..+..++|||+| +|.|+|++||.+|+++
T Consensus 298 d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~----~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~ 373 (415)
T 3awm_A 298 DFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWD----EDSFNFIPQGGGDHYLGHRCPGEWIVLAIMKV 373 (415)
T ss_dssp CEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCC----CCSSSCCTTCCSCTTTSCCCTTHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCC----CCCCCccCCCCCCCCCCCcCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754 235689999999 5999999999999999
Q ss_pred HHHHHHHhceeecCCCCCCCCCCcccccceeeecCCceEEeeec
Q 044178 322 PLAQLLFHFDWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 322 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
++++|+++|++++.++.. ... ...++++|++|+++++++
T Consensus 374 ~l~~ll~~f~~~~~~~~~----~~~-~~~~~~~p~~~~~~~~~~ 412 (415)
T 3awm_A 374 AAHLLVNAMRYDVPDQDL----SID-FARLPALPKSGFVMRNVH 412 (415)
T ss_dssp HHHHHHHTCEEECCSCCC----CBC-TTSSSCCBTTCCEEEEEE
T ss_pred HHHHHHHhcEEEeCCCCC----CcC-cCCCccccCCCceEEEEe
Confidence 999999999999866432 222 235678999999999875
No 34
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=3e-51 Score=377.19 Aligned_cols=249 Identities=14% Similarity=0.201 Sum_probs=217.4
Q ss_pred CCCchHHHHHHHHhc--CCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHH
Q 044178 56 ASLPHHSLRDLTQKH--GPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQ 133 (366)
Q Consensus 56 ~~~~~~~~~~~~~ky--G~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 133 (366)
..+++.++.+|+++| |||+++++++ +.++|+|++.+++++. +.+.|++++.......... +....+..+|+.|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGE-FELMMAGQDDPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCcc-cccCcccCCchHHHH
Confidence 578999999999999 9999999976 5899999999999995 5556776654433211111 222335567999999
Q ss_pred HHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------------------------
Q 044178 134 LRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------------ 165 (366)
Q Consensus 134 ~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------------ 165 (366)
+|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 95 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~ 173 (398)
T 4fb2_A 95 YRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAILLGLPPEDGDTYRRWVWAITHVEN 173 (398)
T ss_dssp HHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHHHTTSCGGGHHHHHHHHHHHHHCCC
T ss_pred HHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCC
Confidence 99998 78899999888888888888888764
Q ss_pred ------------------------------------------------------hhhhccccchHHHHHHHHHHHhhCHH
Q 044178 166 ------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPR 191 (366)
Q Consensus 166 ------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~ 191 (366)
++++||+|||+.+++|++++|++||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~ 253 (398)
T 4fb2_A 174 PEEGAEIFAELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIE 253 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcccCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHH
Confidence 67899999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCC
Q 044178 192 ILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDP 271 (366)
Q Consensus 192 ~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~ 271 (366)
+|+|+++|++ +++|+|+|+||++|+++ . +|.+.+|++++||.||+|+.|.++.+++||||
T Consensus 254 ~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp 313 (398)
T 4fb2_A 254 LRRRLIAHPE------------------LIPNAVDELLRFYGPAM-V-GRLVTQEVTVGDITMKPGQTAMLWFPIASRDR 313 (398)
T ss_dssp HHHHHHHCGG------------------GHHHHHHHHHHHHCCBC-E-EEEECSCEEETTEEECTTCEEEECHHHHTTCT
T ss_pred HHHHHHhCHH------------------HHHHHHHHHHHhCCCcC-C-CeeeCCCEEECCEEECCCCEEEechHhhcCCh
Confidence 9999999863 57999999999999999 4 79999999999999999999999999999999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCC
Q 044178 272 SYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGM 338 (366)
Q Consensus 272 ~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~ 338 (366)
++|+||++|+||||- ..++|||+|+|.|+|++||.+|+++++++++++| +++++++.
T Consensus 314 ~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~ 371 (398)
T 4fb2_A 314 SAFDSPDNIVIERTP----------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK 371 (398)
T ss_dssp TTSSSTTSCCTTCCS----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS
T ss_pred hhCCCcCeeCCCCCC----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence 999999999999972 3689999999999999999999999999999999 99998764
No 35
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1.4e-50 Score=373.71 Aligned_cols=274 Identities=17% Similarity=0.224 Sum_probs=225.3
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc-----chhccCCCceEecCCChh
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA-----KFTSYDYTNIGLAPYGSY 130 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 130 (366)
..+++.++.++ ++||||+++++++.++++|+|++.+++++.++. |++++..... ......+.++ +..+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMM-ILMDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCG-GGCCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccccccc-ccCCchH
Confidence 56899999999 999999999999999999999999999998653 7665432211 1111123444 3456999
Q ss_pred HHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------------
Q 044178 131 WRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------------- 165 (366)
Q Consensus 131 w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------------- 165 (366)
|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 95 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 173 (411)
T 3a4g_A 95 HTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLVD 173 (411)
T ss_dssp HHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHTT
T ss_pred HHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 99999998 66788777666666555555555443
Q ss_pred ----------------------------------------------------------hhhhccccchHHHHHHHHHHHh
Q 044178 166 ----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEML 187 (366)
Q Consensus 166 ----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~ 187 (366)
++++||+|||+.+++|++++|+
T Consensus 174 ~~p~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~ 253 (411)
T 3a4g_A 174 DSPADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALL 253 (411)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Confidence 5688999999999999999999
Q ss_pred hCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhh
Q 044178 188 KNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAI 267 (366)
Q Consensus 188 ~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~ 267 (366)
+||++|+|+++|+ .|++|+|+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++
T Consensus 254 ~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~ 315 (411)
T 3a4g_A 254 THPDQRKLLAEDP------------------SLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAA 315 (411)
T ss_dssp TCHHHHHHHHHCG------------------GGHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHH
T ss_pred hCHHHHHHHhcCH------------------HHHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhh
Confidence 9999999999975 2799999999999999995558999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCcc
Q 044178 268 GRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDMS 346 (366)
Q Consensus 268 ~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~ 346 (366)
||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.. ++...
T Consensus 316 ~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~~~ 383 (411)
T 3a4g_A 316 NRDADWMPEPDRLDITRDA----------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLD--ELVYR 383 (411)
T ss_dssp TTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--GCCBC
T ss_pred CCChhhcCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCcc--ccccc
Confidence 9999999999999999973 2589999999999999999999999999999999 799875422 22222
Q ss_pred cccceeeecCCceEEeeecC
Q 044178 347 EVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 347 ~~~~~~~~p~~~~~~~~~~~ 366 (366)
...++++..++.+++++|
T Consensus 384 --~~~~~~~~~~lpv~~~~r 401 (411)
T 3a4g_A 384 --ESTLVRGLSRMPVTMGPR 401 (411)
T ss_dssp --CCTTBCCBSCCEEECCCC
T ss_pred --cCccccCcceeEEEecCc
Confidence 244567777888887775
No 36
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=1.1e-50 Score=374.13 Aligned_cols=285 Identities=20% Similarity=0.258 Sum_probs=230.3
Q ss_pred CCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEec-CCee-EEEeCCHHHHHHHHhhCCcccCCCCcccccc-
Q 044178 37 KLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL-GEVS-TIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK- 113 (366)
Q Consensus 37 ~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~-~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~- 113 (366)
+.+|+|+++|+.++ . ..+++.++.+++ +||||+++++ +|.+ +++|+|++.+++++.+ ..|+.++......
T Consensus 8 ~~~~~~~~~p~~~~---~-~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~ 80 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---P-GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVT 80 (406)
T ss_dssp CCSCCEEECCCCCC---C-TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBC
T ss_pred hhccCCCCCCCCcc---c-ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcc
Confidence 55688888999877 3 568999999985 7999999996 6777 9999999999999985 3466554321111
Q ss_pred -h---hccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------
Q 044178 114 -F---TSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------ 165 (366)
Q Consensus 114 -~---~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------ 165 (366)
. ....+.++.+ .+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 81 ~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~ 158 (406)
T 1s1f_A 81 RLAPHFIPARGAVGF-LDPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVIC 158 (406)
T ss_dssp BSSSSCSSCTTSGGG-CCTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHH
T ss_pred ccccccccccccccc-CCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHHHHH
Confidence 0 1111344444 4699999999998 66788887777776666666555432
Q ss_pred -------------------------------------------------------------------------------h
Q 044178 166 -------------------------------------------------------------------------------D 166 (366)
Q Consensus 166 -------------------------------------------------------------------------------~ 166 (366)
+
T Consensus 159 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~ls~~el~~~~~~ 238 (406)
T 1s1f_A 159 ELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVL 238 (406)
T ss_dssp HHHTCCGGGHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcccCCCHHHHHHHHHH
Confidence 5
Q ss_pred hhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCC-CCCcccccC
Q 044178 167 IFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAP-LLLPRESRE 245 (366)
Q Consensus 167 ~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~-~~~~R~~~~ 245 (366)
+++|| |||+.+++|++++|++||++|+|+++|++ |++|+|+|+||++|+++ ..++|.+.+
T Consensus 239 l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~ 299 (406)
T 1s1f_A 239 LQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE------------------IRPRAIDELLRWIPHRNAVGLSRIALE 299 (406)
T ss_dssp HHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHSCCBSSCCCCEEESS
T ss_pred HHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhCCCccccCcceEeCC
Confidence 68899 99999999999999999999999999852 78999999999999999 445899999
Q ss_pred CceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 044178 246 SCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQ 325 (366)
Q Consensus 246 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 325 (366)
|++++||.||+|+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|+++++++
T Consensus 300 d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ 369 (406)
T 1s1f_A 300 DVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP----------NPHVSFGFGPHYCPGGMLARLESELLVDA 369 (406)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC------------CCCCTTCCSTTCCTTHHHHHHHHHHHHHH
T ss_pred CEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999995 25799999999999999999999999999
Q ss_pred HHHhc-eeecCCCCCCCCCCcccccceeeecCCceEEee
Q 044178 326 LLFHF-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIP 363 (366)
Q Consensus 326 ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 363 (366)
++++| ++++.++.. ++.. ..+.+.++..++.+++
T Consensus 370 ll~~f~~~~l~~~~~--~~~~--~~~~~~~~~~~lpv~~ 404 (406)
T 1s1f_A 370 VLDRVPGLKLAVAPE--DVPF--KKGALIRGPEALPVTW 404 (406)
T ss_dssp HHHHSTTCEESSCGG--GSCB--CSSCSBCCBSCCEEEC
T ss_pred HHHhCCCcEeCCCCc--ccee--ccCcccCCcceeEEee
Confidence 99999 799876532 2222 2344567777887765
No 37
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=8.3e-51 Score=374.65 Aligned_cols=274 Identities=17% Similarity=0.260 Sum_probs=226.5
Q ss_pred CCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCc--c-cccchh-c-cCCCceEecCCCh
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPL--L-VSAKFT-S-YDYTNIGLAPYGS 129 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~--~-~~~~~~-~-~~~~~~~~~~~~~ 129 (366)
..+++.++.++ ++||||+++++ ++.++++++|++.+++++.++ .|++++. . ...... . ..+.++ +..+|+
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~ 93 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSL-LWQDEP 93 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCC-TTCCTT
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccc-ccCCch
Confidence 56889999999 89999999997 899999999999999999864 3555431 1 111001 1 123444 345699
Q ss_pred hHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------------------
Q 044178 130 YWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------------------- 165 (366)
Q Consensus 130 ~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------------------- 165 (366)
.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 172 (403)
T 3aba_A 94 EHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAM 172 (403)
T ss_dssp HHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH
T ss_pred hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999998 67788888777776666666555432
Q ss_pred ------------------------------------------------------------hhhhccccchHHHHHHHHHH
Q 044178 166 ------------------------------------------------------------DIFVAGSDTSSTSVEWAMAE 185 (366)
Q Consensus 166 ------------------------------------------------------------~~~~ag~~tt~~~l~~~l~~ 185 (366)
++++||+|||+.+++|++++
T Consensus 173 ~~~~~~p~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~ 252 (403)
T 3aba_A 173 MRVDQDAAATEAAGMRLGGLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTAL 252 (403)
T ss_dssp SBSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecch
Q 044178 186 MLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAW 265 (366)
Q Consensus 186 l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~ 265 (366)
|++||++|+|+++|+ .|++|+|+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+
T Consensus 253 L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~ 314 (403)
T 3aba_A 253 LLDSPDQLALLREDP------------------SLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVL 314 (403)
T ss_dssp HHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHH
T ss_pred HHHCHHHHHHHHhCH------------------HHHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCCEEEechh
Confidence 999999999999974 37999999999999999955589999999999999999999999999
Q ss_pred hhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCC
Q 044178 266 AIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLD 344 (366)
Q Consensus 266 ~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~ 344 (366)
++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.. ++.
T Consensus 315 ~~~rdp~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~ 382 (403)
T 3aba_A 315 AADFDPAFVEEPERFDITRRP----------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVE--ELR 382 (403)
T ss_dssp HHTTCTTTSSSTTSCCTTSCC----------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--GSC
T ss_pred hhCCChhhCCCccccCCCCCC----------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceecCCcc--ccc
Confidence 999999999999999999983 2589999999999999999999999999999999 689866422 222
Q ss_pred cccccceeeecCCceEEeeecC
Q 044178 345 MSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 345 ~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
. ..+.+.++..++.+++++|
T Consensus 383 ~--~~~~~~~~~~~lpv~~~~r 402 (403)
T 3aba_A 383 F--RHDMVFYGVHELPVTWHHH 402 (403)
T ss_dssp B--CTTBSSCCBSCCEEECCCC
T ss_pred c--ccCcccCCcceeEEEecCC
Confidence 2 2355678888999998887
No 38
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=1.1e-50 Score=374.81 Aligned_cols=268 Identities=20% Similarity=0.251 Sum_probs=215.9
Q ss_pred CCCCCCCCCCcceeeccccCCCCchHHHHHHHHhc-CCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 36 QKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKH-GPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 36 ~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
...||+|+++|.+..-..+ ..+++..+.++ ++| |||+++++ ++.++++|+|++.+++++.++. ++.++......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~-~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~ 79 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSC-PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFP 79 (412)
T ss_dssp ----CCCCSSCBSSCCCSS-TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSC
T ss_pred CCCCCCCCCCCCCCCCchh-ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccc
Confidence 3456888888876333345 67899999999 788 99999998 8999999999999999998642 34332211111
Q ss_pred hh-----cc--CCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------
Q 044178 114 FT-----SY--DYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------- 165 (366)
Q Consensus 114 ~~-----~~--~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------- 165 (366)
.. .. ...++ +..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 80 ~~~~~~~~~~~~~~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~ 157 (412)
T 2zbx_A 80 ATSPRFEAVRESPQAF-IGLDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSM 157 (412)
T ss_dssp CCSGGGC----CCCCG-GGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHH
T ss_pred cccccccccccccccc-ccCCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHH
Confidence 00 00 12233 345699999999997 66677776666555555444444432
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 158 vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~ 237 (412)
T 2zbx_A 158 VICRLLGVPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGLVGALVADQLANGEIDREELIST 237 (412)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHTTTTTTSSCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcccCCCCCHHHHHHH
Confidence
Q ss_pred --hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccc
Q 044178 166 --DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRES 243 (366)
Q Consensus 166 --~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~ 243 (366)
++++||+|||+.+++|++++|++||++|+|+++|+ .|++|+|+|+||++|+++..++|.+
T Consensus 238 ~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~ 299 (412)
T 2zbx_A 238 AMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR------------------SLVPGAVEELLRYLAIADIAGGRVA 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhCCccccccceee
Confidence 67889999999999999999999999999999874 2799999999999999996558999
Q ss_pred cCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHH
Q 044178 244 RESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPL 323 (366)
Q Consensus 244 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 323 (366)
.+|++++||.||+|+.|.++.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|+++++
T Consensus 300 ~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l 369 (412)
T 2zbx_A 300 TADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA----------RHHLAFGFGVHQCLGQNLARLELEVIL 369 (412)
T ss_dssp SSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTSCTTHHHHHHHHHHHH
T ss_pred CCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC----------CCccCCCCCCCcCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999971 368999999999999999999999999
Q ss_pred HHHHHhc-eeecCCC
Q 044178 324 AQLLFHF-DWKLPNG 337 (366)
Q Consensus 324 ~~ll~~f-~~~~~~~ 337 (366)
+.++++| ++++.++
T Consensus 370 ~~ll~~f~~~~~~~~ 384 (412)
T 2zbx_A 370 NALMDRVPTLRLAVP 384 (412)
T ss_dssp HHHHHHCTTCEESSC
T ss_pred HHHHHhcCcccccCC
Confidence 9999999 7998654
No 39
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=6.8e-51 Score=375.72 Aligned_cols=272 Identities=19% Similarity=0.255 Sum_probs=227.9
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc----chhccCCCceEecCCChhH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA----KFTSYDYTNIGLAPYGSYW 131 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~w 131 (366)
..+++.++.++ ++||||+++++++.++++++|++.+++++.++ ..|+.++..... ......+.++ +..+|+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMM-LFQNQPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSG-GGCCTTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcch-hhcCCchH
Confidence 45789999988 58999999999999999999999999999866 567666532111 0111113344 44569999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------------------
Q 044178 132 RQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------------------- 165 (366)
Q Consensus 132 ~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------------------- 165 (366)
+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 89 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~ 167 (404)
T 3ejb_B 89 RRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLIQT 167 (404)
T ss_dssp HHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHGG
T ss_pred HHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence 9999998 78899998888888888887777764
Q ss_pred --------------------------------------------------------------hhhhccccchHHHHHHHH
Q 044178 166 --------------------------------------------------------------DIFVAGSDTSSTSVEWAM 183 (366)
Q Consensus 166 --------------------------------------------------------------~~~~ag~~tt~~~l~~~l 183 (366)
.+++||+|||+.+++|++
T Consensus 168 ~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l 247 (404)
T 3ejb_B 168 IDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAASTCILLAIAGHETTVNLISNSV 247 (404)
T ss_dssp GSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHhcccCCCCCHHHHHHHHHHHHHcchHHHHHHHHHHH
Confidence 678899999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeec
Q 044178 184 AEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVN 263 (366)
Q Consensus 184 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~ 263 (366)
++|++||++|+|+++|++ |++++++|+||++|+++.. +|.+.+|++++||.||+|+.|.++
T Consensus 248 ~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~ 308 (404)
T 3ejb_B 248 LCLLQHPEQLLKLRENPD------------------LIGTAVEECLRYESPTQMT-ARVASEDIDICGVTIRQGEQVYLL 308 (404)
T ss_dssp HHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCEE-EEEESSCEEETTEEECTTCEEEEE
T ss_pred HHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCccccc-ceEeCCCeEECCEEECCCCEEEec
Confidence 999999999999999853 6899999999999999954 899999999999999999999999
Q ss_pred chhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCC
Q 044178 264 AWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDH 342 (366)
Q Consensus 264 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~ 342 (366)
.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|+++++++++++| ++++.+++
T Consensus 309 ~~~~~rdp~~~~dp~~F~p~R~~----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~---- 374 (404)
T 3ejb_B 309 LGAANRDPSIFTNPDVFDITRSP----------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLNLADFE---- 374 (404)
T ss_dssp HHHHTTCTTTSSSTTSCCTTCSS----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEEC--C----
T ss_pred HHHhCCChhhCCCcceeCCCCCC----------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccccCCCC----
Confidence 99999999999999999999982 2579999999999999999999999999999999 99997542
Q ss_pred CCcccccceeeecCCceEEeeecC
Q 044178 343 LDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 343 ~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
+. ...+.++++..++.|+++||
T Consensus 375 ~~--~~~~~~~~~~~~lpv~~~~~ 396 (404)
T 3ejb_B 375 WR--YRPLFGFRALEELPVTFEAS 396 (404)
T ss_dssp CC--BCSCSSBCCBSCCEEECC--
T ss_pred ce--eccCcccCCcceeEEEEecc
Confidence 22 23355667778888888775
No 40
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=2e-51 Score=387.06 Aligned_cols=296 Identities=17% Similarity=0.226 Sum_probs=225.4
Q ss_pred CCCCCCCCCCCCcceeeccccC----CC-CchHHHHHHHHhcCC-eeEEecCC-------eeEEEeCCHHHHHHHHhh--
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLV----AS-LPHHSLRDLTQKHGP-LMHLKLGE-------VSTIVVSSQEIAKEVLKT-- 98 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~----~~-~~~~~~~~~~~kyG~-i~~~~~~~-------~~~vvv~~~~~v~~il~~-- 98 (366)
.+.+.||||++||++||+.+++ .. +++.++.++++|||+ ||++++++ ...+++.+.+..+.++..
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 5677889999999999998863 44 789999999999999 99999864 344555555554444431
Q ss_pred --CCcccCCCCcccccchhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------
Q 044178 99 --HDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------- 165 (366)
Q Consensus 99 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------- 165 (366)
....+..... ......+.......+..+++.|+++|+++ .+.|+.+ ++.+.+.++++++++++.
T Consensus 86 ~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~~~~~~~v 162 (473)
T 3dan_A 86 VEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAELAKNGKA 162 (473)
T ss_dssp EECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred eecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 1111111111 11111111112233445699999999997 5666663 555555555544444332
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 163 dl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (473)
T 3dan_A 163 AFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYD 242 (473)
T ss_dssp ECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhchhhhHH
Confidence
Q ss_pred --------------------------hhh---hccccchHHHHHHHHHHHhh-CHHHHHHHHHHHHHHhcC-C-CCCCHH
Q 044178 166 --------------------------DIF---VAGSDTSSTSVEWAMAEMLK-NPRILKEAQAEVRRVFKG-K-ENVNEA 213 (366)
Q Consensus 166 --------------------------~~~---~ag~~tt~~~l~~~l~~l~~-~p~~~~kl~~Ei~~~~~~-~-~~~~~~ 213 (366)
.++ ++|++||+.+++|++++|++ ||++|+++++|+++++++ . +.++.+
T Consensus 243 ~~~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~ 322 (473)
T 3dan_A 243 YFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLE 322 (473)
T ss_dssp HHHHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHH
T ss_pred HHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHH
Confidence 112 55666699999999999999 799999999999999765 3 688999
Q ss_pred HhhcChhHHHHHHHHhccCCCCCCCCcccccCCcee----cceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCC
Q 044178 214 AIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEI----NGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSS 289 (366)
Q Consensus 214 ~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l----~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~ 289 (366)
++++||||+|+++|+||++|+++... |.+.+|+++ +||.||+|+.|.++.+++||||++|+||++||||||++++
T Consensus 323 ~l~~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p~R~~~~~ 401 (473)
T 3dan_A 323 AIEQMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG 401 (473)
T ss_dssp HHHTCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTTTSGGG
T ss_pred HHhcCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCccccCCCc
Confidence 99999999999999999999999985 669999999 9999999999999999999999999999999999999862
Q ss_pred CCCCCCCCcccccCC---------CCCCCccHHHHHHHHHHHHHHHHHhceeecCCC
Q 044178 290 IDYRGKDFEYIPFGA---------GRRICPGITFAIPNIELPLAQLLFHFDWKLPNG 337 (366)
Q Consensus 290 ~~~~~~~~~~~~Fg~---------G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~ 337 (366)
. ....+++||. |+|.|+|++||.+|+++++++++++|++...++
T Consensus 402 ~----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 454 (473)
T 3dan_A 402 E----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL 454 (473)
T ss_dssp G----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred c----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence 1 2234455554 559999999999999999999999999765544
No 41
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.2e-50 Score=377.36 Aligned_cols=277 Identities=19% Similarity=0.289 Sum_probs=223.0
Q ss_pred CCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHHHH
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLRR 136 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~ 136 (366)
.+++.++.++ ++||||+++..++ +++|++++.+++++.++.. |+.++....... ..+.+..+..+|+.|+++|+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~--~~~~~~l~~~dg~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEP--VMRGPVLAQMHGKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCC--SCC-------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-cccccccccccc--ccCCCccccCCcHHHHHHHH
Confidence 4778888876 6899999988766 8999999999999986544 766544332221 11233344556999999999
Q ss_pred HHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------------------
Q 044178 137 ICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------------------- 165 (366)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------------------- 165 (366)
++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 127 ~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 205 (441)
T 3nc3_A 127 IV-VRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSIS 205 (441)
T ss_dssp HH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHCSC
T ss_pred HH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccccc
Confidence 98 78899999999888888888888765
Q ss_pred -----------------------------------------------------------hhhhccccchHHHHHHHHHHH
Q 044178 166 -----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEM 186 (366)
Q Consensus 166 -----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l 186 (366)
.+++||+|||+.+++|++++|
T Consensus 206 ~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~Dll~~Ll~~~~~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L 285 (441)
T 3nc3_A 206 QSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHL 285 (441)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 678999999999999999999
Q ss_pred hhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchh
Q 044178 187 LKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWA 266 (366)
Q Consensus 187 ~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~ 266 (366)
++||++|+++++|+ +|++++|+|+||++|+++.. +|.+.+|++++||.||+|+.|.++.++
T Consensus 286 ~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~ 346 (441)
T 3nc3_A 286 LNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQLI-PRQLSQDTVVGGMEIKKDTIVFCMIGA 346 (441)
T ss_dssp HTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEE-EEEESSCEESSSCEECTTCEEEEEHHH
T ss_pred HhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcccCc-cEEECCCEEECCEEECCCCEEEechHH
Confidence 99999999999874 68999999999999999985 799999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCc
Q 044178 267 IGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDM 345 (366)
Q Consensus 267 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~ 345 (366)
+||||++|+||++|+||||+.++......+..++|||+|+|.|+|++||.+|+++++++|+++| ++++.++..
T Consensus 347 ~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~------ 420 (441)
T 3nc3_A 347 ANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDFC------ 420 (441)
T ss_dssp HHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTCC------
T ss_pred hcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCCc------
Confidence 9999999999999999999865543222356899999999999999999999999999999999 999976531
Q ss_pred ccccceeeecCCceEEeeec
Q 044178 346 SEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 346 ~~~~~~~~~p~~~~~~~~~~ 365 (366)
....+.+++...++.|+++|
T Consensus 421 ~~~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 421 YAESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp CCEECSSBCEESCCEEECC-
T ss_pred ccccCccccCcceeEEEEec
Confidence 22334566777788887764
No 42
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=3.2e-50 Score=371.76 Aligned_cols=293 Identities=16% Similarity=0.182 Sum_probs=227.4
Q ss_pred ccCCCCCCCCCCCCCcce--eecccc----CCCCchHHHHHHHHhcC--CeeEEecCCeeEEEeCCHHHHHHHHhhCCcc
Q 044178 31 TKSTSQKLPPGPWRLPLI--GNLHQL----VASLPHHSLRDLTQKHG--PLMHLKLGEVSTIVVSSQEIAKEVLKTHDLV 102 (366)
Q Consensus 31 ~~~~~~~~ppgp~~~P~l--G~~~~~----~~~~~~~~~~~~~~kyG--~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~ 102 (366)
.+..+.++||||.+.|.. +.+-.+ ...+++.++.+|+ +|| ||++++..| ++++++|++.+++++.+ ...
T Consensus 5 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~ 81 (415)
T 2zwu_A 5 TIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRH 81 (415)
T ss_dssp ------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTT
T ss_pred cccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccc
Confidence 456788899999999875 533211 1357889999995 899 999999333 69999999999999974 446
Q ss_pred cCCCC-cccccchhccCCCc-eEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------
Q 044178 103 FAQRP-LLVSAKFTSYDYTN-IGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------- 165 (366)
Q Consensus 103 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------- 165 (366)
|++++ ...... ... +.+ +. ..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 82 f~~~~~~~~~~~-~~~-~~~~l~-~~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~ 157 (415)
T 2zwu_A 82 FSSECPFIPREA-GEA-YDFIPT-SMDPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAE 157 (415)
T ss_dssp EETTSCSSSHHH-HHH-CCCTTT-TCCTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTT
T ss_pred cCCCcccCCCCc-ccc-ccccCc-cCCCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 77665 211111 111 233 43 34699999999997 56677666555555444444443322
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 158 ~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ 237 (415)
T 2zwu_A 158 PFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSD 237 (415)
T ss_dssp HHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhhcCCCCCHH
Confidence
Q ss_pred -------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCC
Q 044178 166 -------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLL 238 (366)
Q Consensus 166 -------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~ 238 (366)
++++||+|||+.+++|++++|++||++|+|+++|++ |++|+|+|+||++|+++ .
T Consensus 238 ~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~ 298 (415)
T 2zwu_A 238 EAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE------------------RIPAACEELLRRFSLVA-D 298 (415)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCCBC-C
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhcCCcC-C
Confidence 678999999999999999999999999999999852 79999999999999999 4
Q ss_pred CcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHH
Q 044178 239 LPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPN 318 (366)
Q Consensus 239 ~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e 318 (366)
+ |.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||- ..++|||+|+|.|+|++||.+|
T Consensus 299 ~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e 367 (415)
T 2zwu_A 299 G-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK----------VSHTTFGHGSHLCLGQHLARRE 367 (415)
T ss_dssp E-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCSS----------CCCCTTCCGGGCCSSHHHHHHH
T ss_pred c-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHH
Confidence 6 9999999999999999999999999999999999999999999951 3589999999999999999999
Q ss_pred HHHHHHHHHHhce-eecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 319 IELPLAQLLFHFD-WKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 319 ~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
+++++++++++|+ +++.++. ... ....+.++..++.+++++|
T Consensus 368 ~~~~la~ll~~f~~~~~~~~~-----~~~-~~~~~~~~~~~lpv~~~~r 410 (415)
T 2zwu_A 368 IIVTLKEWLTRIPDFSIAPGA-----QIQ-HKSGIVSGVQALPLVWDPA 410 (415)
T ss_dssp HHHHHHHHHHHCCSCEECTTC-----CCC-EECSSBCEESCCEEECCGG
T ss_pred HHHHHHHHHHhCCCCEECCCc-----ccc-cCCccccCcceeEEEEecC
Confidence 9999999999998 9987632 121 2344566667788877765
No 43
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=1.4e-50 Score=373.91 Aligned_cols=275 Identities=16% Similarity=0.251 Sum_probs=222.7
Q ss_pred ccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccch---hcc----CCCceEe
Q 044178 53 QLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKF---TSY----DYTNIGL 124 (366)
Q Consensus 53 ~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~ 124 (366)
.+ ..+++..+.+| ++||||+++++ ++.++++|+|++.+++++.++. ++.++....... ... ...++ +
T Consensus 21 ~~-~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 95 (408)
T 3abb_A 21 TC-PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPL-I 95 (408)
T ss_dssp SS-TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTT-T
T ss_pred cc-ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCcccccccccc-c
Confidence 45 56899999999 89999999998 8999999999999999998642 333322011100 000 11233 3
Q ss_pred cCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------
Q 044178 125 APYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------- 165 (366)
Q Consensus 125 ~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------- 165 (366)
..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 96 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~ 174 (408)
T 3abb_A 96 GVDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICELLGVPYGDHDFFEE 174 (408)
T ss_dssp TCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHH
T ss_pred cCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 45799999999998 67788777766666665555555432
Q ss_pred ----------------------------------------------------------------hhhhccccchHHHHHH
Q 044178 166 ----------------------------------------------------------------DIFVAGSDTSSTSVEW 181 (366)
Q Consensus 166 ----------------------------------------------------------------~~~~ag~~tt~~~l~~ 181 (366)
++++||+|||+.+++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~ 254 (408)
T 3abb_A 175 CSRNFVGAATSAEADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIAL 254 (408)
T ss_dssp HHHHHC------CCSSHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEe
Q 044178 182 AMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRII 261 (366)
Q Consensus 182 ~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~ 261 (366)
++++|++||++|+|+++|++ |++|+|+|+||++|+++ .++|.+.+|++++||.||+|+.|.
T Consensus 255 ~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~G~~Ip~Gt~V~ 315 (408)
T 3abb_A 255 GALTLIQHPEQIDVLLRDPG------------------AVSGVVEELLRFTSVSD-HIVRMAKEDIEVGGATIKAGDAVL 315 (408)
T ss_dssp HHHHHHTCGGGGGGGGSCHH------------------HHHHHHHHHHHHHCSSC-EEEEEESSCEEETTEEECTTCEEE
T ss_pred HHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCccc-ccceEeCCCeEECCEEECCCCEEE
Confidence 99999999999999998753 68999999999999999 558999999999999999999999
Q ss_pred ecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCC
Q 044178 262 VNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQ 340 (366)
Q Consensus 262 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~ 340 (366)
++.+++||||++|+||++|+|||| +..++|||+|+|.|+|++||.+|+++++++++++| ++++.++..
T Consensus 316 ~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~- 384 (408)
T 3abb_A 316 VSITLMNRDAKAYENPDIFDARRN----------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLD- 384 (408)
T ss_dssp EEHHHHHTCTTTSSSTTSCCTTSC----------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG-
T ss_pred eChHHhcCCcccCCCcccCCCCCC----------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCcc-
Confidence 999999999999999999999996 13689999999999999999999999999999999 899865422
Q ss_pred CCCCcccccceeeecCCceEEeeecC
Q 044178 341 DHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 341 ~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++... ...+.++..++.+.+++|
T Consensus 385 -~~~~~--~~~~~~~~~~lpv~~~~~ 407 (408)
T 3abb_A 385 -EVPIK--AGHDAQGPIELPVVWHHH 407 (408)
T ss_dssp -GSCBC--CTTSCCSBSCCEEECSCC
T ss_pred -ccccc--cCcccCCcceeEEEeCCC
Confidence 22222 244667788898888876
No 44
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=3.3e-50 Score=373.97 Aligned_cols=269 Identities=17% Similarity=0.190 Sum_probs=225.4
Q ss_pred CCCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEe--------cCCeeEEEeCCHHHHHHHHhhCCcccC
Q 044178 33 STSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLK--------LGEVSTIVVSSQEIAKEVLKTHDLVFA 104 (366)
Q Consensus 33 ~~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~--------~~~~~~vvv~~~~~v~~il~~~~~~~~ 104 (366)
......||+|.++++++..... ..+++.++.++ ++||||+++. +|+.++++|++++.+++++.+. ..|+
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~-~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs 90 (433)
T 3ivy_A 14 RTTVPSPNLPPGFDFTDPAIYA-ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFS 90 (433)
T ss_dssp ------CCCCTTCCTTCHHHHT-TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEE
T ss_pred ecccCCCCCCCCCCCCCHHHhh-cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhcc
Confidence 3445567788888887765433 45799999999 7899999998 5558999999999999999744 5576
Q ss_pred CCCcccccc--------hhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------
Q 044178 105 QRPLLVSAK--------FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------- 165 (366)
Q Consensus 105 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------- 165 (366)
.++...... .....+.++ +..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~ 168 (433)
T 3ivy_A 91 SYENGVIPRFKNDIAREDIEVQRFVM-LNMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVE 168 (433)
T ss_dssp STTTCSCCCCCTTCCHHHHHGGGGSG-GGCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHHH
T ss_pred CCcccccccccccccccccccccCCc-cccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHHH
Confidence 655432221 111223343 355699999999998 88899999999888888888777764
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 169 ~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~ 248 (433)
T 3ivy_A 169 QVSCELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADI 248 (433)
T ss_dssp HTTSHHHHHHHHHHHTCCHHHHHHHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHHC-------CHHHHHSCC-
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHhhhc
Confidence
Q ss_pred ---------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhc
Q 044178 166 ---------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLR 230 (366)
Q Consensus 166 ---------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR 230 (366)
.+++||+|||+.+++|++++|++||++|+|+++|++ +++|+|+||
T Consensus 249 ~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~a~i~E~LR 308 (433)
T 3ivy_A 249 DGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP--------------------ETAADEIVR 308 (433)
T ss_dssp -CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC--------------------TTHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc--------------------cchhHHHhh
Confidence 678999999999999999999999999999999974 789999999
Q ss_pred cCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccC-CCCCCC
Q 044178 231 LHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFG-AGRRIC 309 (366)
Q Consensus 231 l~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg-~G~r~C 309 (366)
++|+++.. +|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||. ..++||| +|+|.|
T Consensus 309 l~p~~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~----------~~~l~FGg~G~r~C 377 (433)
T 3ivy_A 309 WATPVTAF-QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP----------NPHVGFGGTGAHYC 377 (433)
T ss_dssp HHCSBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS----------CCCCTTCSSSTTCC
T ss_pred hCcchhce-eeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC----------CCCCCCCCCCCccC
Confidence 99999986 79999999999999999999999999999999999999999999983 2589999 999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhce-eecCCC
Q 044178 310 PGITFAIPNIELPLAQLLFHFD-WKLPNG 337 (366)
Q Consensus 310 ~G~~~A~~e~~~~l~~ll~~f~-~~~~~~ 337 (366)
+|++||.+|++++++.|+++|+ +++.++
T Consensus 378 ~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 406 (433)
T 3ivy_A 378 IGANLARMTINLIFNAVADHMPDLKPISA 406 (433)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCccEECCC
Confidence 9999999999999999999999 998754
No 45
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=6.6e-50 Score=369.33 Aligned_cols=275 Identities=24% Similarity=0.337 Sum_probs=223.5
Q ss_pred ccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCc--cccc-ch------hc-cCCCce
Q 044178 53 QLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPL--LVSA-KF------TS-YDYTNI 122 (366)
Q Consensus 53 ~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~--~~~~-~~------~~-~~~~~~ 122 (366)
.+ ..+++..+.++ ++||||+++++++.++++|+|++.+++++.++. ++.++. .... .. .. ..+.++
T Consensus 12 ~~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (408)
T 1odo_A 12 PT-GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENM 87 (408)
T ss_dssp TT-CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSG
T ss_pred cc-cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccc
Confidence 44 67899999999 999999999998999999999999999997543 333321 1100 00 00 012333
Q ss_pred EecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------
Q 044178 123 GLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------- 165 (366)
Q Consensus 123 ~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------- 165 (366)
+..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 88 -~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~ 165 (408)
T 1odo_A 88 -FTAYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRD 165 (408)
T ss_dssp -GGCCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHH
T ss_pred -cccCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHHHhCCCHHHHH
Confidence 445699999999998 67788877777666666555554432
Q ss_pred ------------------------------------------------------------------------hhhhcccc
Q 044178 166 ------------------------------------------------------------------------DIFVAGSD 173 (366)
Q Consensus 166 ------------------------------------------------------------------------~~~~ag~~ 173 (366)
++++||+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~d 245 (408)
T 1odo_A 166 GFRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYE 245 (408)
T ss_dssp HHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhHH
Confidence 56789999
Q ss_pred chHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceec-ce
Q 044178 174 TSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEIN-GY 252 (366)
Q Consensus 174 tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~-g~ 252 (366)
||+.+++|++++|++||++|+|+++|+ .|++|||+|+||++|+++..++|.+.+|++++ ||
T Consensus 246 Tt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~ 307 (408)
T 1odo_A 246 TTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGR 307 (408)
T ss_dssp THHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTSC
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCCc
Confidence 999999999999999999999999863 36999999999999999975589999999999 99
Q ss_pred eeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-e
Q 044178 253 AIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-D 331 (366)
Q Consensus 253 ~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~ 331 (366)
.||+|+.|.++.+++||||++|+||++|+|||+ +..++|||+|+|.|+|++||.+|++++++.++++| +
T Consensus 308 ~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~----------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~ 377 (408)
T 1odo_A 308 TIARGEPILASYAAANRHPDWHEDADTFDATRT----------VKEHLAFGHGVHFCLGAPLARMEVTLALESLFGRFPD 377 (408)
T ss_dssp EECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS----------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTT
T ss_pred EECCCCEEEeChhhhcCChhhcCCccccCCCCC----------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999993 13689999999999999999999999999999999 7
Q ss_pred eecCCCCCCCCCCcccccceeeecCCceEEeeec
Q 044178 332 WKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
+++.++.. ++. ...+.++++..++.++++|
T Consensus 378 ~~~~~~~~--~~~--~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 378 LRLADPAE--ELP--PVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp CEESCTTS--CCC--BCSCSSBCCBSCCEEECC-
T ss_pred ceecCCcc--ccc--cccCccccCcccceEEecC
Confidence 99865422 222 2345677888899998875
No 46
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=7.4e-50 Score=369.35 Aligned_cols=281 Identities=17% Similarity=0.242 Sum_probs=223.0
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAK 113 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~ 113 (366)
++...+|||. + ..+++.++.++++ |||| ++++.++++++|++.+++++.++ ..|++++......
T Consensus 16 ~pl~~~PGp~----------~-~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~ 79 (411)
T 2jjn_A 16 TTIDEVPGMA----------D-ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVIEG 79 (411)
T ss_dssp -CCCSCCCSS----------C-HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGSTT
T ss_pred CCCCCCCCcc----------c-ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccCCc
Confidence 5666778877 1 2478899999976 9998 56777899999999999999864 4577665322111
Q ss_pred hhccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------
Q 044178 114 FTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------- 165 (366)
Q Consensus 114 ~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------- 165 (366)
....+.++ +..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 80 -~~~~~~~~-~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~vi~~~fG~~~ 156 (411)
T 2jjn_A 80 -ASPTPGMI-HEIDPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVAELLGLPP 156 (411)
T ss_dssp -CCCCTTCG-GGCCTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHHHHHHHHTCCS
T ss_pred -cccccccc-ccCCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHcCCCH
Confidence 11123344 344699999999998 67788877777776666666555531
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~ 236 (411)
T 2jjn_A 157 MDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVDGRALDDEEAANFST 236 (411)
T ss_dssp CCCSTTCCHHHHHHHSCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHH
Confidence
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccC
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRE 245 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~ 245 (366)
++++||+|||+.+++|++++|++||++|+|+++|++ |++|+|+|+||++|+++. ++|.+.+
T Consensus 237 ~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~ 297 (411)
T 2jjn_A 237 ALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------------RIPAIVEEVLRYRPPFPQ-MQRTTTK 297 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG------------------GHHHHHHHHHHHSCSSCE-EEEEESS
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHhhhCCCcCC-cceEECC
Confidence 678999999999999999999999999999999863 799999999999999997 4899999
Q ss_pred CceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 044178 246 SCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQ 325 (366)
Q Consensus 246 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 325 (366)
|++++||.||+|+.|.++.+++||||++|+||++|+||||.+ ...++|||+|+|.|+|++||.+|+++++++
T Consensus 298 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ 369 (411)
T 2jjn_A 298 ATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG--------GAAQLSFGHGVHFCLGAPLARLENRVALEE 369 (411)
T ss_dssp CEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS--------SCCCGGGCSSTTCCTTHHHHHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC--------CCCccCCCCCCccCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999752 135899999999999999999999999999
Q ss_pred HHHhce-eecCCCCCCCCCCcccccceeeecCCceEEeeec
Q 044178 326 LLFHFD-WKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 326 ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
++++|+ +++.++.. .......+.++..++.+++++
T Consensus 370 ll~~f~~~~~~~~~~-----~~~~~~~~~~~~~~lpv~~~~ 405 (411)
T 2jjn_A 370 IIARFGRLTVDRDDE-----RLRHFEQIVLGTRHLPVLAGS 405 (411)
T ss_dssp HHHHHSCCEECCSSC-----CCCBCCSSSSSBSCCEEECSC
T ss_pred HHHhCCcceECCCCc-----eeccccccccCcceeEEEecC
Confidence 999995 99864321 111223344555555555544
No 47
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=5.9e-50 Score=371.95 Aligned_cols=287 Identities=16% Similarity=0.208 Sum_probs=224.8
Q ss_pred CCCCCCCCCCCcceeeccccC---C-CCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCc-
Q 044178 35 SQKLPPGPWRLPLIGNLHQLV---A-SLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPL- 108 (366)
Q Consensus 35 ~~~~ppgp~~~P~lG~~~~~~---~-~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~- 108 (366)
..++||| ++|++.+.. . .+++..+.++++ ||||+++++ |+.++++|++++.+++++.++ ..|+.++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 4566777 899876652 1 357888998876 799999998 688999999999999999754 46777654
Q ss_pred cccc-----c-h---hc---cCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------
Q 044178 109 LVSA-----K-F---TS---YDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------- 165 (366)
Q Consensus 109 ~~~~-----~-~---~~---~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------- 165 (366)
.... . . .+ ....++. ..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~-~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~ 154 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLT-SMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFM 154 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGG-GCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEHH
T ss_pred ccCCcccccchhccccccccccccccc-cCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeehH
Confidence 2211 1 1 11 0012343 44699999999997 56676665555444444433333321
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 155 ~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 234 (428)
T 1cpt_A 155 TDCALYYPLHVVMTALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSCP 234 (428)
T ss_dssp HHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence
Q ss_pred ----------------------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhc
Q 044178 166 ----------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHE 217 (366)
Q Consensus 166 ----------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~ 217 (366)
++++||+|||+.+++|++++|++||++|+|+++|++
T Consensus 235 ~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------------- 298 (428)
T 1cpt_A 235 KDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA---------------- 298 (428)
T ss_dssp CSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------------
T ss_pred CCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH----------------
Confidence 678999999999999999999999999999999863
Q ss_pred ChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCC
Q 044178 218 LKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDF 297 (366)
Q Consensus 218 l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~ 297 (366)
|++|+|+|+||++|+++.. +|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||.+
T Consensus 299 --~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~---------- 365 (428)
T 1cpt_A 299 --LIPRLVDEAVRWTAPVKSF-MRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN---------- 365 (428)
T ss_dssp --GHHHHHHHHHHHHCCBCCC-EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSC----------
T ss_pred --HHHHHHHHHHHhCCccccc-ceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCCC----------
Confidence 7999999999999999865 899999999999999999999999999999999999999999999951
Q ss_pred cccccCCCCCCCccHHHHHHHHHHHHHHHHHhce-eecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 298 EYIPFGAGRRICPGITFAIPNIELPLAQLLFHFD-WKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 298 ~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.++|||+|+|.|+|+++|.+|+++++++++++|+ +++.++.. .. .....+...++.++++||
T Consensus 366 ~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~-----~~--~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 366 RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPR-----LV--ATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCCE-----EC--CCSSBCSEEECEEEEEEC
T ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCcc-----cc--cCccccCcceeeEEeeCC
Confidence 3899999999999999999999999999999997 88764321 11 122334444677777664
No 48
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=5.5e-50 Score=368.71 Aligned_cols=250 Identities=14% Similarity=0.201 Sum_probs=216.9
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHHH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLR 135 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R 135 (366)
..+++.++.+++++ |||++++.++ +.++|+|++.+++++.+. +.|++++...........+. ..+..+|+.|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~-~~~~~~g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQF-IPLQQDGAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCC-TTTTCCHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccccccc-CccccCCcHHHHHH
Confidence 56899999999999 9999998874 488899999999999654 56766653222111111122 23455699999999
Q ss_pred HHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------------------------
Q 044178 136 RICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------------------------- 165 (366)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------------------------- 165 (366)
+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 99 ~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 177 (396)
T 3oft_A 99 TPV-MKGLASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSM 177 (396)
T ss_dssp HHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCSSC
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCHH
Confidence 998 78899999999998888888888765
Q ss_pred ----------------------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHH
Q 044178 166 ----------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRIL 193 (366)
Q Consensus 166 ----------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~ 193 (366)
.+++||+|||+.+++|++++|++||++|
T Consensus 178 ~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~ 257 (396)
T 3oft_A 178 TVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQ 257 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHH
Confidence 6789999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCC
Q 044178 194 KEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSY 273 (366)
Q Consensus 194 ~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~ 273 (366)
+|+++|++ |++++++|+||++|++ .. +|.+.+|++++||.||+|+.|.++.+++||||++
T Consensus 258 ~~l~~E~~------------------~l~a~i~E~lRl~p~~-~~-~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~ 317 (396)
T 3oft_A 258 RLLRERPD------------------LIPAAADELMRRYPTV-AV-SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPAS 317 (396)
T ss_dssp HHHHHCGG------------------GHHHHHHHHHHHCCCB-EE-EEEESSCEEETTEEECTTCEEEEETHHHHTCTTT
T ss_pred HHHHhCHH------------------hHHHHHHHHHHhcCcc-cC-ceecCCCEEECCEEECCCCEEEeChHHhCCCccc
Confidence 99999864 7899999999999999 54 7999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCC
Q 044178 274 WSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGM 338 (366)
Q Consensus 274 ~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~ 338 (366)
|+||++|+||||++ +..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.
T Consensus 318 ~~dp~~F~PeR~~~--------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~ 375 (396)
T 3oft_A 318 FEAPEEVRFDRGLA--------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDK 375 (396)
T ss_dssp SSSTTSCCSCCCCC--------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSS
T ss_pred CCCcCccCCCCCCC--------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCC
Confidence 99999999999973 34799999999999999999999999999999999 99998664
No 49
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=2.9e-49 Score=365.58 Aligned_cols=270 Identities=20% Similarity=0.290 Sum_probs=221.0
Q ss_pred CCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCcc-cccchh-c-cCCCceEecCCChhH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLL-VSAKFT-S-YDYTNIGLAPYGSYW 131 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~w 131 (366)
..+++.++.++ ++||||+++++ ++.++++|+|++.+++++.++ .|++++.. ...... . ..+.++ +..+|+.|
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l-~~~dg~~h 111 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGL-LSMDPPEH 111 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSG-GGCCTTHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccC-ccCCchHH
Confidence 56899999999 89999999997 899999999999999999864 35554332 111101 1 123444 34569999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------------------
Q 044178 132 RQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------------------- 165 (366)
Q Consensus 132 ~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------------------- 165 (366)
+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 112 ~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 190 (417)
T 2y5n_A 112 SRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLS 190 (417)
T ss_dssp HHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTST
T ss_pred HHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHhc
Confidence 9999998 67788888877777766666655532
Q ss_pred -----------------------------------------------------------hhhhccccchHHHHHHHHHHH
Q 044178 166 -----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEM 186 (366)
Q Consensus 166 -----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l 186 (366)
++++||+|||+.+++|++++|
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L 270 (417)
T 2y5n_A 191 TAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLL 270 (417)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 678999999999999999999
Q ss_pred hhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCC-CCCcccccCCceecceeeCCCCEEeecch
Q 044178 187 LKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAP-LLLPRESRESCEINGYAIPENTRIIVNAW 265 (366)
Q Consensus 187 ~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~-~~~~R~~~~d~~l~g~~ip~g~~v~~~~~ 265 (366)
++||++|+|+++|+ .|++|+|+|+||++|+++ ..++|.+.+|++++||.||+|+.|.++.+
T Consensus 271 ~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~ 332 (417)
T 2y5n_A 271 MTRPELRRQLLDRP------------------ELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTG 332 (417)
T ss_dssp HHCHHHHHHHHHCG------------------GGHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHH
T ss_pred HHCHHHHHHHHhCH------------------HHHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCCCEEEeChh
Confidence 99999999999974 279999999999999999 45589999999999999999999999999
Q ss_pred hhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCC
Q 044178 266 AIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLD 344 (366)
Q Consensus 266 ~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~ 344 (366)
++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.. ++.
T Consensus 333 ~~~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~ 400 (417)
T 2y5n_A 333 AANRDQAQFPDADRIDVDRTP----------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIPET--QLR 400 (417)
T ss_dssp HHTTCTTTSTTTTSCCTTCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--GCC
T ss_pred hhCCCcccCCCccccCCCCCC----------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCc--cce
Confidence 999999999999999999983 2589999999999999999999999999999999 699876422 222
Q ss_pred cccccceeeecCCceEEe
Q 044178 345 MSEVFGLTIRRKNDLLLI 362 (366)
Q Consensus 345 ~~~~~~~~~~p~~~~~~~ 362 (366)
.. .+.+++...++.|+
T Consensus 401 ~~--~~~~~~~~~~lpv~ 416 (417)
T 2y5n_A 401 WS--EGMLLRGPLELPVV 416 (417)
T ss_dssp BC--CCSSBCCBSCCEEE
T ss_pred ec--cCcccCCcceeEEe
Confidence 22 24455666666654
No 50
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=1.6e-49 Score=368.16 Aligned_cols=271 Identities=15% Similarity=0.163 Sum_probs=224.9
Q ss_pred CCCchHHHHHHHHhcC-CeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHH
Q 044178 56 ASLPHHSLRDLTQKHG-PLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQL 134 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 134 (366)
..+++.++.++++++| ||+++..++ ++++|+|++.+++++. +...|+.++...........+.+ .+..+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~-~~~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMV-PTKLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCT-TTTCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccC-CccCCcHHHHHH
Confidence 3589999999988766 899998876 5899999999999995 45567766532222111111223 344569999999
Q ss_pred HHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------------------
Q 044178 135 RRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------------- 165 (366)
Q Consensus 135 R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------------- 165 (366)
|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 114 R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 192 (421)
T 3lxh_A 114 RKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGN 192 (421)
T ss_dssp HHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCCS
T ss_pred HHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccC
Confidence 9998 78899999999988888888888765
Q ss_pred -----------------------------------------------------------hhhhccccchHHHHHHHHHHH
Q 044178 166 -----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEM 186 (366)
Q Consensus 166 -----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l 186 (366)
.+++||+|||+.+++|++++|
T Consensus 193 ~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L 272 (421)
T 3lxh_A 193 TPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYL 272 (421)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 678999999999999999999
Q ss_pred hhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchh
Q 044178 187 LKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWA 266 (366)
Q Consensus 187 ~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~ 266 (366)
++||++|+|+++|++ |++++|+|+||++|++ .. +|.+.+|++++||.||+|+.|.++.++
T Consensus 273 ~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~ 332 (421)
T 3lxh_A 273 SRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV-SD-ARYVVSDMEFHGTMLKEGDLILLPTAL 332 (421)
T ss_dssp TTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-EE-EEEECSCEEETTEEECTTCEEEEETHH
T ss_pred HhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-CC-ceeeCCCeeECCEEECCCCEEEEchhh
Confidence 999999999999975 6899999999999999 55 799999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCc
Q 044178 267 IGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDM 345 (366)
Q Consensus 267 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~ 345 (366)
+||||++|+||++|+|||| +..++|||+|+|.|+|++||.+|++++++.|+++| ++++.++.. ..
T Consensus 333 ~~rdp~~~~dP~~F~PeR~----------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~~---~~- 398 (421)
T 3lxh_A 333 HGLDDRHHDDPMTVDLSRR----------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRAV---PI- 398 (421)
T ss_dssp HHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTCC---CE-
T ss_pred hCCChhhCCCcCeeCCCCC----------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCCC---ce-
Confidence 9999999999999999994 34799999999999999999999999999999999 999986643 12
Q ss_pred ccccceeeecCCceEEeeecC
Q 044178 346 SEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 346 ~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.....+..++ .+.++++||
T Consensus 399 -~~~~~~~~~~-~lpv~~~p~ 417 (421)
T 3lxh_A 399 -YHSGIVAAVE-NIPLEWEPQ 417 (421)
T ss_dssp -EECSSBCEEE-CCEEECCCC
T ss_pred -eccccccCce-eeeEEEecc
Confidence 2223333443 577776664
No 51
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=3.3e-50 Score=371.45 Aligned_cols=277 Identities=22% Similarity=0.283 Sum_probs=227.4
Q ss_pred ccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCC-ccccc---c------hhc-cC-C
Q 044178 53 QLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRP-LLVSA---K------FTS-YD-Y 119 (366)
Q Consensus 53 ~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~-~~~~~---~------~~~-~~-~ 119 (366)
.+ ..+++..+.++ ++||||+++++ ++.++++++|++.+++++.++. ++.++ ..... . ... .. +
T Consensus 14 ~~-~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (411)
T 1gwi_A 14 PF-VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPG 89 (411)
T ss_dssp TT-CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCC
T ss_pred cc-cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccc
Confidence 44 56899999999 99999999998 8999999999999999998653 33332 11100 0 000 01 2
Q ss_pred CceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------
Q 044178 120 TNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------- 165 (366)
Q Consensus 120 ~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------- 165 (366)
.++ +..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 90 ~~l-~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~ 167 (411)
T 1gwi_A 90 RSM-LTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARL 167 (411)
T ss_dssp SSG-GGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGH
T ss_pred ccc-ccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHHHhCCCHHHH
Confidence 333 445799999999998 67888888777777776666666542
Q ss_pred ----------------------------------------------------------------------hhhhccccch
Q 044178 166 ----------------------------------------------------------------------DIFVAGSDTS 175 (366)
Q Consensus 166 ----------------------------------------------------------------------~~~~ag~~tt 175 (366)
++++||+|||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~~AG~dTt 247 (411)
T 1gwi_A 168 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMVAAGHETT 247 (411)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHhhHH
Confidence 6789999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeC
Q 044178 176 STSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIP 255 (366)
Q Consensus 176 ~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip 255 (366)
+.+++|++++|++||++|+|+++|+ +|++|||+|+||++|+++..++|.+.+|++++||.||
T Consensus 248 ~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip 309 (411)
T 1gwi_A 248 ISLIVNAVVNLSTHPEQRALVLSGE------------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIP 309 (411)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHhChHHHHHHHcCh------------------HHHHHHHHHHHHhCCcccCCceeeeCCCeEECCEEEC
Confidence 9999999999999999999999863 3699999999999999997558999999999999999
Q ss_pred CCCEEeecchhhhcCCCCC-CCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eee
Q 044178 256 ENTRIIVNAWAIGRDPSYW-SEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWK 333 (366)
Q Consensus 256 ~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~ 333 (366)
+|+.|.++.+++||||++| +||++|+||||.+ ..++|||+|+|.|+|++||.+|++++++.++++| +++
T Consensus 310 ~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 380 (411)
T 1gwi_A 310 AGDALIVSYGALGRDERAHGPTADRFDLTRTSG---------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPHLD 380 (411)
T ss_dssp TTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS---------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCEEEecHHHhcCChhhcCCChhhcCCCCCCC---------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccce
Confidence 9999999999999999999 9999999999952 3689999999999999999999999999999999 799
Q ss_pred cCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 334 LPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
+.++.. ++.. ....+.++..++.+.+++|
T Consensus 381 ~~~~~~--~~~~--~~~~~~~~~~~lpv~~~~r 409 (411)
T 1gwi_A 381 LAVPAA--ELRN--KPVVTQNDLFELPVRLAHH 409 (411)
T ss_dssp ESSCGG--GCCB--CSCTTBCCBSCCEEESSCC
T ss_pred eCCCcc--cccc--cccccccCcceeEEEecCC
Confidence 865422 2222 2344667888999998886
No 52
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=3.8e-49 Score=364.45 Aligned_cols=267 Identities=21% Similarity=0.260 Sum_probs=215.5
Q ss_pred CCCCCCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc
Q 044178 34 TSQKLPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA 112 (366)
Q Consensus 34 ~~~~~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~ 112 (366)
++....+||.. |+- ..+ ..+++.++.+|+ +||||+++++ ++.++++|+|++.+++++.++ .|+.++.....
T Consensus 4 ~~~~~~~g~~~-~~~---~~~-~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 75 (413)
T 2z36_A 4 NVADELAGLEL-PVE---RGC-PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGF 75 (413)
T ss_dssp ------CCCEE-CCC---CCB-TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTC
T ss_pred cHHHHhccccC-CCC---ccc-ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCc
Confidence 44555577763 442 234 568999999997 7899999997 899999999999999999863 46655422111
Q ss_pred c----hhcc-----CCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------
Q 044178 113 K----FTSY-----DYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------ 165 (366)
Q Consensus 113 ~----~~~~-----~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------ 165 (366)
. .... .+.+..+..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~ 154 (413)
T 2z36_A 76 PLFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLP 154 (413)
T ss_dssp CCSSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTH
T ss_pred cccccccccccccccccccccccCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhh
Confidence 1 0011 234412344699999999998 66788777776666666555555432
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 155 ~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~e 234 (413)
T 2z36_A 155 VPSLVICELLGVPYTDHDFFQSRTTMMVSRTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQEGTLDHAG 234 (413)
T ss_dssp HHHHHHHHHHTCCGGGHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHSCCCHHH
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcCCCCCCHHH
Confidence
Q ss_pred ------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCC
Q 044178 166 ------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLL 239 (366)
Q Consensus 166 ------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~ 239 (366)
++++||+|||+.+++|++++|++||++|+|+++|+ .|++|+|+|+||++|+++..+
T Consensus 235 i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~ 296 (413)
T 2z36_A 235 LVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP------------------GRTPMAVEELLRYFTIADGVT 296 (413)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCTTTTCE
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HHHHHHHHHHHHhCCCcccce
Confidence 67899999999999999999999999999999985 279999999999999999555
Q ss_pred cccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHH
Q 044178 240 PRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNI 319 (366)
Q Consensus 240 ~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~ 319 (366)
+|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|+
T Consensus 297 ~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~ 366 (413)
T 2z36_A 297 SRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA----------RHHLAFGFGPHQCLGQNLARMEL 366 (413)
T ss_dssp EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC----------CCCCTTCCSTTSCTTHHHHHHHH
T ss_pred eeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC----------CCCCCCCCCCccCccHHHHHHHH
Confidence 89999999999999999999999999999999999999999999983 25799999999999999999999
Q ss_pred HHHHHHHHHhc-eeecCCC
Q 044178 320 ELPLAQLLFHF-DWKLPNG 337 (366)
Q Consensus 320 ~~~l~~ll~~f-~~~~~~~ 337 (366)
+++++.++++| ++++.++
T Consensus 367 ~~~la~ll~~f~~~~l~~~ 385 (413)
T 2z36_A 367 QIVFDTLFRRIPSLRLAVP 385 (413)
T ss_dssp HHHHHHHHHHSTTCEESSC
T ss_pred HHHHHHHHHhCCCccccCC
Confidence 99999999999 5898765
No 53
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=2.1e-49 Score=367.04 Aligned_cols=250 Identities=18% Similarity=0.261 Sum_probs=215.8
Q ss_pred CCCchHHHHHHHHhcCCeeEEecC-CeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchh-c------cCCCceEecCC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLG-EVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFT-S------YDYTNIGLAPY 127 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~-~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~ 127 (366)
..|++..+.+++++ |||++++++ |.++++|+|++.+++++.++ .|+.++........ . ..+.++ +..+
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPF-IRTD 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCG-GGCC
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccch-hhcC
Confidence 57899999999998 999999986 69999999999999999865 46554221111100 0 122333 4456
Q ss_pred ChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------------------
Q 044178 128 GSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------ 165 (366)
Q Consensus 128 ~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------ 165 (366)
|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 104 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 182 (417)
T 3tyw_A 104 APEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICELLGIPRHDLEFFRDVTR 182 (417)
T ss_dssp HHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHHHTCCTTTTTHHHHHHH
T ss_pred CcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999998 78899999888888887777777654
Q ss_pred --------------------------------------------------------------hhhhccccchHHHHHHHH
Q 044178 166 --------------------------------------------------------------DIFVAGSDTSSTSVEWAM 183 (366)
Q Consensus 166 --------------------------------------------------------------~~~~ag~~tt~~~l~~~l 183 (366)
.+++||+|||+.+++|++
T Consensus 183 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~el~~~~~~l~~AG~eTta~~l~~~l 262 (417)
T 3tyw_A 183 ISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALST 262 (417)
T ss_dssp HHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 678999999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeec
Q 044178 184 AEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVN 263 (366)
Q Consensus 184 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~ 263 (366)
++|++||++|+|+++|++ |++++|+|+||++|+++..++|.+.+|++++||.||+|+.|.++
T Consensus 263 ~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~ 324 (417)
T 3tyw_A 263 LLLLDRPELPAELRKDPD------------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIAL 324 (417)
T ss_dssp HHHHHCTHHHHHHHHCGG------------------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEEC
T ss_pred HHHHcCHHHHHHHHhChH------------------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEe
Confidence 999999999999999853 68999999999999999866899999999999999999999999
Q ss_pred chhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCC
Q 044178 264 AWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGM 338 (366)
Q Consensus 264 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~ 338 (366)
.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.|+++| ++++.++.
T Consensus 325 ~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~ 390 (417)
T 3tyw_A 325 LAGANHDPEQFDDPERVDFHRTD----------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGER 390 (417)
T ss_dssp HHHHTTCTTTSSSTTSCCTTCSC----------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSCT
T ss_pred hhhhcCChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCCC
Confidence 99999999999999999999993 3689999999999999999999999999999999 99987543
No 54
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=3.3e-49 Score=364.48 Aligned_cols=273 Identities=17% Similarity=0.236 Sum_probs=225.3
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCC--eeEEEeCCHHHHHHHHhhCCcccCCCCccccc--chhc-cC--CCceEecCCC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGE--VSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA--KFTS-YD--YTNIGLAPYG 128 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~--~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~--~~~~-~~--~~~~~~~~~~ 128 (366)
+++++.++.+++ +||||+++++++ .+++++++++.+++++.+ ..|+..+..... .... .+ +.++ +..+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSL-AFADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCS-TTCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhcccccc-ccCCc
Confidence 456779999997 899999999764 789999999999999975 346554332110 0001 11 3344 34579
Q ss_pred hhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------------
Q 044178 129 SYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------- 165 (366)
Q Consensus 129 ~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------- 165 (366)
+.|+++|+.+ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~ 180 (411)
T 2dkk_A 102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSEVMGVPAADRERVHSWTRQ 180 (411)
T ss_dssp THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCSSHHHHHHHHHGG
T ss_pred hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 9999999998 77799888888777777766666543
Q ss_pred ------------------------------------------------------------hhhhccccchHHHHHHHHHH
Q 044178 166 ------------------------------------------------------------DIFVAGSDTSSTSVEWAMAE 185 (366)
Q Consensus 166 ------------------------------------------------------------~~~~ag~~tt~~~l~~~l~~ 185 (366)
.+++|| |||+.+++|++++
T Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~ 259 (411)
T 2dkk_A 181 IISTSGGAEAAERAKRGLYGWITETVRARAGSEGGDVYSMLGAAVGRGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYL 259 (411)
T ss_dssp GCSSCSCSHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHHHHTTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHH
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 567899 9999999999999
Q ss_pred HhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCC-CcccccCCceecceeeCCCCEEeecc
Q 044178 186 MLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLL-LPRESRESCEINGYAIPENTRIIVNA 264 (366)
Q Consensus 186 l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~-~~R~~~~d~~l~g~~ip~g~~v~~~~ 264 (366)
|++||++|+|+++|++ |++++|+|+||++|+++.. ++|.+.+|++++||.||+|+.|.++.
T Consensus 260 L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~ 321 (411)
T 2dkk_A 260 LLTRRELMARMRERPG------------------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSY 321 (411)
T ss_dssp HHHSHHHHHHHHHCTT------------------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECH
T ss_pred HHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCEEEeCh
Confidence 9999999999999852 6899999999999999954 58999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCC
Q 044178 265 WAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHL 343 (366)
Q Consensus 265 ~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~ 343 (366)
+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.|+++| ++++.++.. ++
T Consensus 322 ~~~~rdp~~f~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~ 389 (411)
T 2dkk_A 322 LAANRDPDVFPDPDRIDLDRDP----------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE--QV 389 (411)
T ss_dssp HHHTTCTTTSSSTTSCCCSCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG--GC
T ss_pred hhhcCChhhCCCCCCCCCCCCC----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCcc--cc
Confidence 9999999999999999999995 2589999999999999999999999999999999 999876522 22
Q ss_pred CcccccceeeecCCceEEeeecC
Q 044178 344 DMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 344 ~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.. ..+.++++..++.+++++|
T Consensus 390 ~~--~~~~~~~~~~~lpv~~~~R 410 (411)
T 2dkk_A 390 AW--RRKTMIRGPRTLPCTWHHH 410 (411)
T ss_dssp CB--CCSSSBCCBSCCEEECCCC
T ss_pred cc--ccCcccCCcceeEEEeccC
Confidence 22 2345667788999999887
No 55
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=4.7e-49 Score=363.19 Aligned_cols=270 Identities=21% Similarity=0.264 Sum_probs=218.8
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcc--c----ccc---hh--c---cCCCc
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLL--V----SAK---FT--S---YDYTN 121 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~--~----~~~---~~--~---~~~~~ 121 (366)
..+++.++.++ ++||||+++++++.++++++|++.+++++.++ .|+.++.. . ... .. . ..+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 56899999999 99999999999999999999999999999865 46665432 1 110 11 0 01344
Q ss_pred eEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------------
Q 044178 122 IGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------ 165 (366)
Q Consensus 122 ~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------ 165 (366)
+. ..+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 90 l~-~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~ 167 (404)
T 1z8o_A 90 MG-TSDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEF 167 (404)
T ss_dssp GG-GCCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGGGTTTH
T ss_pred cc-cCCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 43 44699999999997 56677666555554444444443332
Q ss_pred ---------------------------------------------------------------------hhhhccccchH
Q 044178 166 ---------------------------------------------------------------------DIFVAGSDTSS 176 (366)
Q Consensus 166 ---------------------------------------------------------------------~~~~ag~~tt~ 176 (366)
++++||+|||+
T Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~l~~~ei~~~~~~~~~AG~~Tt~ 247 (404)
T 1z8o_A 168 GRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASV 247 (404)
T ss_dssp HHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhcccCCCCCHHHHHHHHHHHHhcchHHHH
Confidence 56889999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCC
Q 044178 177 TSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPE 256 (366)
Q Consensus 177 ~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~ 256 (366)
.+++|++++|++||++|+|+++|+ .|++|+|+|+||++|+++ .++|.+.+|++++||.||+
T Consensus 248 ~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~ 308 (404)
T 1z8o_A 248 SLIGIGTYLLLTHPDQLALVRRDP------------------SALPNAVEEILRYIAPPE-TTTRFAAEEVEIGGVAIPQ 308 (404)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHTCSSC-CEEEEESSCEEETTEEECT
T ss_pred HHHHHHHHHHHHCHHHHHHHHhCH------------------HhHHHHHHHHHHhcCCcc-CcceEECCCEEECCEEECC
Confidence 999999999999999999999984 269999999999999999 4589999999999999999
Q ss_pred CCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecC
Q 044178 257 NTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLP 335 (366)
Q Consensus 257 g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~ 335 (366)
|+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++| ++++.
T Consensus 309 Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 378 (404)
T 1z8o_A 309 YSTVLVANGAANRDPKQFPDPHRFDVTRDT----------RGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLG 378 (404)
T ss_dssp TCEEEECHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEES
T ss_pred CCEEEecchhhcCCcccCCChhhcCCCCCC----------CCccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEec
Confidence 999999999999999999999999999983 2589999999999999999999999999999999 58987
Q ss_pred CCCCCCCCCcccccceeeecCCceEEee
Q 044178 336 NGMKQDHLDMSEVFGLTIRRKNDLLLIP 363 (366)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 363 (366)
++.. ++.. ..+.++++..++.+++
T Consensus 379 ~~~~--~~~~--~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 379 IDAD--DVVW--RRSLLLRGIDHLPVRL 402 (404)
T ss_dssp SCGG--GCCC--CCCSSSCCCSCCEEET
T ss_pred CCCC--ccee--ccccccCCcceeEEEe
Confidence 5422 2222 2355667778888775
No 56
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=1.1e-48 Score=360.00 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=217.0
Q ss_pred CCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCcccc-cchhccCCCce-EecCCC----
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVS-AKFTSYDYTNI-GLAPYG---- 128 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~---- 128 (366)
..+++.++.++ ++||||+++++ ++.++++|+|++.+++++.++ .|+.++.... .... ..+.+. .+..+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~-~~~~~~~l~~~~g~~~~ 100 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQY-VRSPFLDLLISDADAES 100 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCS-SCCHHHHTTCBCSCHHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcc-cccccccceeeCCCCCC
Confidence 56899999999 89999999997 899999999999999999864 3555443211 1110 112331 234468
Q ss_pred --hhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------------------
Q 044178 129 --SYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------------------- 165 (366)
Q Consensus 129 --~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------------------- 165 (366)
+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 101 ~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~ 179 (404)
T 2xbk_A 101 GRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCEVIGVPPQRRAELTTLL 179 (404)
T ss_dssp HHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHH
T ss_pred CCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999997 66787776666655555444444432
Q ss_pred ---------------------------------------------------------hhhhccccchHHHHHHHHHHHhh
Q 044178 166 ---------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLK 188 (366)
Q Consensus 166 ---------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~ 188 (366)
++++||+|||+.+++|++++|++
T Consensus 180 ~~~~~~~~~p~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~l~~~~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~ 259 (404)
T 2xbk_A 180 AGIAKLDDREGAVRAQDDLFGYVAGLVEHKRAEPGPDIISRLNDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAA 259 (404)
T ss_dssp HHHTBSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHSSSCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhhcCCCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh
Confidence 35789999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCC-CCCcccccCCceecceeeCCCCEEeecchhh
Q 044178 189 NPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAP-LLLPRESRESCEINGYAIPENTRIIVNAWAI 267 (366)
Q Consensus 189 ~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~-~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~ 267 (366)
||++|+|+++|++ |++|+|+|+||++|+++ ..++|.+.+|++++||.||+|+.|.++.+++
T Consensus 260 ~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~ 321 (404)
T 2xbk_A 260 HPDQRAAALADPD------------------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLP 321 (404)
T ss_dssp CHHHHHHHHHCHH------------------HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHH
T ss_pred CHHHHHHHHhCHH------------------HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHh
Confidence 9999999999863 68999999999999999 4458999999999999999999999999999
Q ss_pred hcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCcc
Q 044178 268 GRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDMS 346 (366)
Q Consensus 268 ~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~ 346 (366)
||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.. ++..
T Consensus 322 ~rdp~~~~dP~~F~PeR~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~--~~~~- 388 (404)
T 2xbk_A 322 NFDERAFTGPEEFDAARTP----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVE--QLRL- 388 (404)
T ss_dssp HTCTTTSSSTTSCCTTCSS----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--GCCB-
T ss_pred cCChhhCCCccccCCCCCC----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCC--ccee-
Confidence 9999999999999999983 2589999999999999999999999999999999 799876422 2222
Q ss_pred cccceeeecCCceEEe
Q 044178 347 EVFGLTIRRKNDLLLI 362 (366)
Q Consensus 347 ~~~~~~~~p~~~~~~~ 362 (366)
..+.+++...++.|+
T Consensus 389 -~~~~~~~~~~~lpv~ 403 (404)
T 2xbk_A 389 -KEGQLSGGFAELRVV 403 (404)
T ss_dssp -CSSBTTCCBSCCEEE
T ss_pred -ccCcccCCcceeeee
Confidence 234455666676664
No 57
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=2.1e-49 Score=366.11 Aligned_cols=271 Identities=19% Similarity=0.241 Sum_probs=225.0
Q ss_pred CCchHHHHHHHHhcCCeeEEecCC--eeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhcc--CC-CceEecCCChhH
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKLGE--VSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSY--DY-TNIGLAPYGSYW 131 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~~~--~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~w 131 (366)
.+++..+.++++ ||||+++...| .++++|++++.+++++.+ .+.|+.++.......... .. .+..+..+|+.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCccccCcHHH
Confidence 579999999987 99999997445 899999999999999964 445766544322211100 01 222345679999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------------------
Q 044178 132 RQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------------------- 165 (366)
Q Consensus 132 ~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------------------- 165 (366)
+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 115 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~ 193 (415)
T 3mgx_A 115 RKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCEILGVPAEDEDMLIDLTNHAFGG 193 (415)
T ss_dssp HHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHTSC
T ss_pred HHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcc
Confidence 9999997 78899999988888888888887764
Q ss_pred --------------------------------------------------------hhhhccccchHHHHHHHHHHHhhC
Q 044178 166 --------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKN 189 (366)
Q Consensus 166 --------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~ 189 (366)
.+++||+|||+.+++|++++|++|
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~ 273 (415)
T 3mgx_A 194 EDELFDGMTPRQAHTEILVYFDELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATV 273 (415)
T ss_dssp CC----CCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHS
T ss_pred cCcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHC
Confidence 568999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhc
Q 044178 190 PRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGR 269 (366)
Q Consensus 190 p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~ 269 (366)
|++|+|+++|+ +|++++|+|+||++|+++.. +|.+.+|++++||.||+|+.|.++.+++||
T Consensus 274 P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~r 334 (415)
T 3mgx_A 274 PGLLTALRDGS------------------ADVDTVVEEVLRWTSPAMHV-LRVTTADVTINGRDLPSGTPVVAWLPAANR 334 (415)
T ss_dssp TTHHHHHHHTS------------------SCHHHHHHHHHHHHCCBCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTT
T ss_pred HHHHHHHHhCh------------------HhHHHHHHHHHHhcCccccc-ceecCCCeeECCEEECCCCEEEechHHhCC
Confidence 99999999985 79999999999999999965 799999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCcccc
Q 044178 270 DPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDMSEV 348 (366)
Q Consensus 270 d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~ 348 (366)
||++|+||++|+||||. ..++|||+|+|.|+|++||.+|+++++++|+++| ++++.++.. . .
T Consensus 335 Dp~~~~dP~~F~P~R~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~-----~--~ 397 (415)
T 3mgx_A 335 DPAEFDDPDTFLPGRKP----------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLEREPA-----W--L 397 (415)
T ss_dssp CTTTSSSTTSCCTTCCS----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCCE-----E--C
T ss_pred ChhhcCCccccCCCCCC----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCcc-----c--c
Confidence 99999999999999973 2589999999999999999999999999999999 899864421 1 1
Q ss_pred cceeeecCCceEEeeecC
Q 044178 349 FGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 349 ~~~~~~p~~~~~~~~~~~ 366 (366)
.+...+....+.|++++|
T Consensus 398 ~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 398 RAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp SCSSBCCEEECEEEEEEC
T ss_pred cCCcccCceeeeEEEecC
Confidence 223344445777777776
No 58
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=4.9e-49 Score=365.07 Aligned_cols=270 Identities=19% Similarity=0.230 Sum_probs=220.9
Q ss_pred CCCchHHHHHHHHhcCCeeEEecC--CeeEEEeCCHHHHHHHHhhCCcccCCCCcc--------c-ccc-----hhccCC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLG--EVSTIVVSSQEIAKEVLKTHDLVFAQRPLL--------V-SAK-----FTSYDY 119 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~--~~~~vvv~~~~~v~~il~~~~~~~~~~~~~--------~-~~~-----~~~~~~ 119 (366)
..+++.++.+++ +||||+++++| +.++++|+|++.+++++.++ .|+.++.. . ... .....+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 357899999986 59999999987 78899999999999999864 57666431 1 000 011112
Q ss_pred CceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------
Q 044178 120 TNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------- 165 (366)
Q Consensus 120 ~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------- 165 (366)
.++.+. +|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 96 ~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~~G~~~~~~~ 173 (425)
T 2z3t_A 96 NWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISALLGIPEEDHT 173 (425)
T ss_dssp TCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHHHTCCGGGHH
T ss_pred cccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 444444 599999999998 77788887777776666666665543
Q ss_pred ----------------------------------------------------------------------------hhhh
Q 044178 166 ----------------------------------------------------------------------------DIFV 169 (366)
Q Consensus 166 ----------------------------------------------------------------------------~~~~ 169 (366)
++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~el~~~~~~l~~ 253 (425)
T 2z3t_A 174 WLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGGDDRDDLLTLLVRARDTGSPLSVDGIVGTCVHLLT 253 (425)
T ss_dssp HHHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 6789
Q ss_pred ccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCcee
Q 044178 170 AGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEI 249 (366)
Q Consensus 170 ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l 249 (366)
||+|||+.+++|++++|++||++|+|+++|++ |++|+|+|+||++|+++ .++|.+.+|+++
T Consensus 254 AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~~~R~~~~d~~l 314 (425)
T 2z3t_A 254 AGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------STPAAVEELMRYDPPVQ-AVTRWAYEDIRL 314 (425)
T ss_dssp HTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBC-EEEEEESSCEEE
T ss_pred hhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hHHHHHHHHHHhCCccc-CcceEeCCCeeE
Confidence 99999999999999999999999999999852 79999999999999999 458999999999
Q ss_pred cceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHh
Q 044178 250 NGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFH 329 (366)
Q Consensus 250 ~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~ 329 (366)
+||.||+|+.|.++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.++++
T Consensus 315 ~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~ 384 (425)
T 2z3t_A 315 GDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA----------ERQVGFGLGIHYCLGATLARAEAEIGLRALLDG 384 (425)
T ss_dssp TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999995 258999999999999999999999999999999
Q ss_pred c-eeecCCCCCCCCCCcccccceeeecCCceEEeeec
Q 044178 330 F-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 330 f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
| +++ .++.. . .. ....++++..++.|++++
T Consensus 385 f~~~~-~~~~~--~-~~--~~~~~~~~~~~lpv~~~~ 415 (425)
T 2z3t_A 385 IPALG-RGAHE--V-EY--ADDMVFHGPTRLLLDLPD 415 (425)
T ss_dssp CGGGG-SSCEE--E-EE--CSCSSBCCEEEEEECCC-
T ss_pred CCcCc-cCCCc--c-cc--ccccccCCcceeeEEecc
Confidence 9 899 65431 1 12 234456777777777654
No 59
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=2.5e-49 Score=364.25 Aligned_cols=268 Identities=21% Similarity=0.231 Sum_probs=220.9
Q ss_pred CCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc-------chhccCCCceEecCCCh
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA-------KFTSYDYTNIGLAPYGS 129 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 129 (366)
.+++.++.++ ++||||++ + |.++++|+|++.+++++.+ ..|+.++..... ......+.++. ..+|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIIL-FQDEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGG-GCCTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccc-cCCch
Confidence 4788889877 59999999 6 6889999999999999975 345544321100 01111033443 44699
Q ss_pred hHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------------------
Q 044178 130 YWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------------------- 165 (366)
Q Consensus 130 ~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------------------- 165 (366)
.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 164 (397)
T 3buj_A 86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVG 164 (397)
T ss_dssp HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 999999998 67788888777777776666666543
Q ss_pred ----------------------------------------------------------------hhhhccccchHHHHHH
Q 044178 166 ----------------------------------------------------------------DIFVAGSDTSSTSVEW 181 (366)
Q Consensus 166 ----------------------------------------------------------------~~~~ag~~tt~~~l~~ 181 (366)
++++||+|||+.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~ei~~~~~~~~~AG~~Tt~~~l~~ 244 (397)
T 3buj_A 165 RTLDRGASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVASQVGN 244 (397)
T ss_dssp GGGCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhhhcCCCCHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 5688999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEe
Q 044178 182 AMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRII 261 (366)
Q Consensus 182 ~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~ 261 (366)
++++|++||++|+|+++|+ .|++|+|+|+||++|+++ .++|.+.+|++++||.||+|+.|.
T Consensus 245 ~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~-~~~R~~~~d~~~~g~~Ip~Gt~V~ 305 (397)
T 3buj_A 245 AVLSLLAHPDQLDLLRRRP------------------DLLAQAVEECLRYDPSVQ-SNTRQLDVDVELRGRRLRRDDVVV 305 (397)
T ss_dssp HHHHHHHSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSCC-EEEEEESSCEEETTEEECTTCEEE
T ss_pred HHHHHHhCHHHHHHHhhCH------------------HHHHHHHHHHHhhcCccc-CcceEECCCEEECCEEECCCCEEE
Confidence 9999999999999999985 289999999999999999 458999999999999999999999
Q ss_pred ecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCC
Q 044178 262 VNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQ 340 (366)
Q Consensus 262 ~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~ 340 (366)
++.+++||||++|+||++|+||||. ..++|||+|+|.|+|++||.+|++++++.+ ++| ++++.++..
T Consensus 306 ~~~~~~~rdp~~~~dp~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~- 373 (397)
T 3buj_A 306 VLAGAANRDPRRYDRPDDFDIERDP----------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASD- 373 (397)
T ss_dssp EEHHHHTTCTTTCSSTTSCCTTSCC----------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCST-
T ss_pred EChhhhCCCccccCCccccCCCCCC----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCc-
Confidence 9999999999999999999999995 257999999999999999999999999999 999 899876522
Q ss_pred CCCCcccccceeeecCCceEEeeecC
Q 044178 341 DHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 341 ~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++.. ..+.++++..++.++++||
T Consensus 374 -~~~~--~~~~~~~~~~~l~v~~~~r 396 (397)
T 3buj_A 374 -ALAY--QPRTMFRGLASLPIAFTPG 396 (397)
T ss_dssp -TCCB--CSCSSCCCBSCCEEECCTT
T ss_pred -cccc--ccccccCCCcceeEEecCC
Confidence 2222 2355678888999999887
No 60
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=4.2e-49 Score=364.26 Aligned_cols=278 Identities=18% Similarity=0.225 Sum_probs=218.3
Q ss_pred eeeccccC----CCCchHHHHHHHHhcCCee-----EEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccc-ccc--hh
Q 044178 48 IGNLHQLV----ASLPHHSLRDLTQKHGPLM-----HLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLV-SAK--FT 115 (366)
Q Consensus 48 lG~~~~~~----~~~~~~~~~~~~~kyG~i~-----~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~-~~~--~~ 115 (366)
+|+.+++. ..+++.++.+++ +||||+ ++++ .++++|+|++.+++++.++ ..|++++... ... ..
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~ 87 (414)
T 2uuq_A 12 MSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEM 87 (414)
T ss_dssp -CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHH
T ss_pred hcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccc
Confidence 45544443 357899999985 799999 8776 6799999999999999875 5577665432 111 11
Q ss_pred -c-cCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------
Q 044178 116 -S-YDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------- 165 (366)
Q Consensus 116 -~-~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------- 165 (366)
. ..+.++.+. +|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 88 ~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~~~G~ 165 (414)
T 2uuq_A 88 IGLHDTPPMVMQ-DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAHYLGV 165 (414)
T ss_dssp HTCSSSCCGGGC-CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHHHTTC
T ss_pred cccccccccccC-CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCC
Confidence 1 224455444 699999999997 56666555444433333333222221
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~ 245 (414)
T 2uuq_A 166 PEEDWTQFDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTF 245 (414)
T ss_dssp CGGGHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHTTTTCTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccccCCCCCCHHHHHHHHH
Confidence
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccC
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRE 245 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~ 245 (366)
++++||+|||+.+++|++++|++||++|+|+++|+ +|++|+|+|+||++|+++ .++|.+.+
T Consensus 246 ~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~-~~~R~~~~ 306 (414)
T 2uuq_A 246 TMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDAVEELLRLTSPVQ-GLARTTTR 306 (414)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBC-CEEEEESS
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCCcC-CcceEECC
Confidence 56789999999999999999999999999999985 389999999999999999 55899999
Q ss_pred CceecceeeCCCCEEeecchhhhcCCCCC-CCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHH
Q 044178 246 SCEINGYAIPENTRIIVNAWAIGRDPSYW-SEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLA 324 (366)
Q Consensus 246 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~ 324 (366)
|++++||.||+|+.|.++.+++||||++| +||++|+||||. ..++|||+|+|.|+|++||.+|++++++
T Consensus 307 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la 376 (414)
T 2uuq_A 307 DVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP----------RNILTFSHGAHHCLGAAAARMQCRVALT 376 (414)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC----------CSCCTTCSSTTCCTTHHHHHHHHHHHHH
T ss_pred CEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC----------CCCcCCCCCCccCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999984 2589999999999999999999999999
Q ss_pred HHHHhc-eeecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 325 QLLFHF-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 325 ~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
.++++| ++++.++ ++.. ..+.++++..++.++++||
T Consensus 377 ~ll~~f~~~~l~~~----~~~~--~~~~~~~~~~~lpv~~~~r 413 (414)
T 2uuq_A 377 ELLARCPDFEVAES----RIVW--SGGSYVRRPLSVPFRVTSS 413 (414)
T ss_dssp HHHHHCCSEEECGG----GCEE--CCCSSBCCEEECEEEEC--
T ss_pred HHHHhCcccEECCC----Cccc--cccccccCcceeEEEecCC
Confidence 999999 6998732 1222 2345667888888888776
No 61
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-48 Score=358.14 Aligned_cols=242 Identities=17% Similarity=0.207 Sum_probs=206.3
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHHH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLR 135 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R 135 (366)
..+++.++.++++ |||||++. . ++++|+|++.+++++.++. .|++++... ... ..+.++. ..+|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~--~~~~~l~-~~~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQ--PALPMMI-DMDDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTS--CCCSSGG-GCCTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcc-cccCccccC-Ccc--ccccccc-ccCchHHHHHH
Confidence 3578999999987 99999764 3 7899999999999997643 576665322 111 1233443 44699999999
Q ss_pred HHHHhhhcchhhhhhhhhhHHHHHHHHHhh--------------------------------------------------
Q 044178 136 RICTVELLSTKRVQSFRSIREEEVSNLIKT-------------------------------------------------- 165 (366)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------------------------------- 165 (366)
+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 166 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSH 166 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHTSC
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcc
Confidence 998 77788877777776666666665543
Q ss_pred -----------------------------------------------------------hhhhccccchHHHHHHHHHHH
Q 044178 166 -----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEM 186 (366)
Q Consensus 166 -----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l 186 (366)
++++||+|||+.+++|++++|
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L 246 (398)
T 2xkr_A 167 VSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQL 246 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 678899999999999999999
Q ss_pred hhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchh
Q 044178 187 LKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWA 266 (366)
Q Consensus 187 ~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~ 266 (366)
++||++|+|+++|++ |++|+|+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.++
T Consensus 247 ~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~ 307 (398)
T 2xkr_A 247 LRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKN-MCRVLTADTEFHGTALCAGEKMMLLFES 307 (398)
T ss_dssp HHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCE-EEEEESSCEEETTEEECTTCEEEEEHHH
T ss_pred HHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccC-cceEECCCeeECCEEECCCCEEEeChhh
Confidence 999999999999864 799999999999999998 5899999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCC
Q 044178 267 IGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPN 336 (366)
Q Consensus 267 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~ 336 (366)
+||||++|+||++|+||||.+ .++|||+|+|.|+|++||.+|++++++.++++| ++++.+
T Consensus 308 ~~rdp~~~~dP~~F~PeR~~~----------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~ 368 (398)
T 2xkr_A 308 ANFDEAVFCEPEKFDVQRNPN----------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVA 368 (398)
T ss_dssp HHTCTTTSSSTTSCCTTCSSC----------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESC
T ss_pred hcCChhhCCCCCeeCCCCCCC----------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECC
Confidence 999999999999999999742 489999999999999999999999999999999 599864
No 62
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=2.1e-48 Score=356.75 Aligned_cols=267 Identities=17% Similarity=0.198 Sum_probs=219.5
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCC----eeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhH
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGE----VSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYW 131 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~----~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 131 (366)
..+++.++.++ ++||||+++++++ .++++|+|++.+++++. +...|+.++.......... ..+..+..+|+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRAL-LPGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CC-CTTCGGGCCTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccc-cccccccCCChhH
Confidence 56899999999 5999999999986 89999999999999995 5567777655432221111 2233455679999
Q ss_pred HHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh----------------------------------------------
Q 044178 132 RQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT---------------------------------------------- 165 (366)
Q Consensus 132 ~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------------------------------------------- 165 (366)
+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 88 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~ 166 (384)
T 3oo3_A 88 TRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESRE 166 (384)
T ss_dssp HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhc
Confidence 9999998 78899999888888888877777654
Q ss_pred -------------------------------------------------------hhhhccccchHHHHHHHHHHHhhCH
Q 044178 166 -------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNP 190 (366)
Q Consensus 166 -------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p 190 (366)
++++||+|||+.+++|++++|++||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~l~~ll~~~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P 246 (384)
T 3oo3_A 167 SRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMIGVIVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHP 246 (384)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCH
Confidence 6789999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcC
Q 044178 191 RILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRD 270 (366)
Q Consensus 191 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d 270 (366)
++|+|+++|++. ++|+|+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++||
T Consensus 247 ~~~~~l~~E~~~------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r- 307 (384)
T 3oo3_A 247 DQMALLREKPEL------------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR- 307 (384)
T ss_dssp HHHHHHHHCGGG------------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC-
T ss_pred HHHHHHHhCHHH------------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC-
Confidence 999999999765 7999999999999999766899999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCccccc
Q 044178 271 PSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDMSEVF 349 (366)
Q Consensus 271 ~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~ 349 (366)
+||++|+|||| +..++|||+|+|.|+|++||.+|++++++.++++| ++++.++.. ++...+.
T Consensus 308 ----~dp~~F~PeR~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~--~~~~~~~- 370 (384)
T 3oo3_A 308 ----APGDRFDITRE----------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEE--DLRFKPG- 370 (384)
T ss_dssp ----CTTCCCCTTCS----------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--GCCEECS-
T ss_pred ----CCcceeCCCCC----------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCc--cceeecc-
Confidence 89999999995 24689999999999999999999999999999999 999876543 2332220
Q ss_pred ceeeecCCceEEe
Q 044178 350 GLTIRRKNDLLLI 362 (366)
Q Consensus 350 ~~~~~p~~~~~~~ 362 (366)
..+.++...+.|+
T Consensus 371 ~~~~~~~~~lpv~ 383 (384)
T 3oo3_A 371 RPAPFAVEELPLE 383 (384)
T ss_dssp SSSCCEESCCEEE
T ss_pred cccccCcceeeee
Confidence 3344444455543
No 63
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=1.3e-48 Score=361.84 Aligned_cols=269 Identities=19% Similarity=0.277 Sum_probs=220.0
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCc-----cc-c--cchhccC-CCceEecC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPL-----LV-S--AKFTSYD-YTNIGLAP 126 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~ 126 (366)
..+++.++.++ ++||||++ + ++.++++|+|++.+++++.++. |+.++. .. . ....... +.++. ..
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~ 98 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLF-GL 98 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTT-TS
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccc-cC
Confidence 56899999999 78999999 6 7789999999999999998653 776651 11 1 0111000 22333 34
Q ss_pred CChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------------------
Q 044178 127 YGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------------------- 165 (366)
Q Consensus 127 ~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------------------- 165 (366)
+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 99 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~ 177 (419)
T 1q5d_A 99 PPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRFGS 177 (419)
T ss_dssp CHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHHHH
T ss_pred CchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 699999999997 66777776666665555555555443
Q ss_pred ------------------------------------------------------------------------hhhhcccc
Q 044178 166 ------------------------------------------------------------------------DIFVAGSD 173 (366)
Q Consensus 166 ------------------------------------------------------------------------~~~~ag~~ 173 (366)
++++||+|
T Consensus 178 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~d 257 (419)
T 1q5d_A 178 ATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTD 257 (419)
T ss_dssp HHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHSH
T ss_pred HHHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhH
Confidence 56889999
Q ss_pred chHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceeccee
Q 044178 174 TSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYA 253 (366)
Q Consensus 174 tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ 253 (366)
||+.+++|++++|++||++|+|+++|+ .|++|+|+|+||++|+++..++|.+.+|++++||.
T Consensus 258 Tta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~ 319 (419)
T 1q5d_A 258 TTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNALDEVLRFDNILRIGTVRFARQDLEYCGAS 319 (419)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBSSEEEEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCccccccceeeCCCeEECCEE
Confidence 999999999999999999999999983 37999999999999999955589999999999999
Q ss_pred eCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ee
Q 044178 254 IPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DW 332 (366)
Q Consensus 254 ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~ 332 (366)
||+|+.|.++.+++||||++|+||++|+|||+ + ..++|||+|+|.|+|++||.+|+++++++|+++| ++
T Consensus 320 Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~--~--------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~ 389 (419)
T 1q5d_A 320 IKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD--T--------SASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRFPEM 389 (419)
T ss_dssp ECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC--C--------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ECCCCEEEecHHHhcCChhhCCChhhcCCCCC--C--------CCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhCCCe
Confidence 99999999999999999999999999999994 1 3589999999999999999999999999999999 89
Q ss_pred ecCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 333 KLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
++.++. ... ...++++..++.+++++|
T Consensus 390 ~~~~~~-----~~~--~~~~~~~~~~l~v~~~~r 416 (419)
T 1q5d_A 390 KLKETP-----VFG--YHPAFRNIESLNVILKPS 416 (419)
T ss_dssp EECSCC-----EEC--CCSSBCCEEECEEESSCC
T ss_pred EECCCc-----ccc--cccccCCCceeEEEEecC
Confidence 987642 122 244667778899988876
No 64
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=9.7e-48 Score=354.80 Aligned_cols=282 Identities=19% Similarity=0.256 Sum_probs=229.4
Q ss_pred CCCCccee-ec--cccCCCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc---chh
Q 044178 42 PWRLPLIG-NL--HQLVASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA---KFT 115 (366)
Q Consensus 42 p~~~P~lG-~~--~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~---~~~ 115 (366)
+.++|.+| +. .++ ..||+..+.++++ +|||++ ..+..+++|++++.|++++.+. ..|+........ ...
T Consensus 17 ~~~~P~~~~dp~~~~~-~~dP~~~~~~lR~-~gPV~~--~~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~ 91 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDY-FADPYPEQETLRE-AGPVVY--LDKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEK 91 (412)
T ss_dssp STTSCEECCCTTSHHH-HHSCHHHHHHHHH-HCSSEE--ETTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSC
T ss_pred CCCCCccCCCCCCHHH-HhCcHHHHHHHHh-cCCEEE--ECCCCEEEECCHHHHHHHHcCC-ccccCCCccccccccccc
Confidence 44688877 11 223 4588999988864 699975 4566789999999999999754 344332211111 111
Q ss_pred ccCCCceEecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------
Q 044178 116 SYDYTNIGLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------ 165 (366)
Q Consensus 116 ~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------ 165 (366)
.....+..+..+|+.|+++|+++ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 92 ~~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~~~~~~D~v~~~~~~~~~~~i~~l~g~~ 170 (412)
T 4dnj_A 92 PWRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLARGGNIDAIADLAEAYPLSVFPDAMGLK 170 (412)
T ss_dssp CSSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTSEEETCCCCCCHHHHHHHHHHHTCC
T ss_pred cccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhccCCCceeHHHHHhhhhHhHHHHHcCCc
Confidence 11123334556799999999998 78899999999999998888888765
Q ss_pred ----------------------------------------------------------------------------hhhh
Q 044178 166 ----------------------------------------------------------------------------DIFV 169 (366)
Q Consensus 166 ----------------------------------------------------------------------------~~~~ 169 (366)
.+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~e~~~~~~~l~~ 250 (412)
T 4dnj_A 171 QEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGACIHAFSDTGEITPEEAPLLVRSLLS 250 (412)
T ss_dssp STTGGGHHHHHHHHHHHTSCSSHHHHHHHHTCHHHHHHHHHHTSGGGSCTTSHHHHHHHTTTTTSSCTTHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHhhhhccchhHHHHHHHHHHHHh
Confidence 6789
Q ss_pred ccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCcee
Q 044178 170 AGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEI 249 (366)
Q Consensus 170 ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l 249 (366)
||+|||+.+++|++++|++||++|+|+++| ..++.++++|++|++|+++.. +|.+.+|+++
T Consensus 251 AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~------------------~~~~~~~~eE~lR~~pp~~~~-~R~a~~d~~l 311 (412)
T 4dnj_A 251 AGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSLARNAFEEAVRFESPVQTF-FRTTTRDVEL 311 (412)
T ss_dssp HSSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHHCSBCEE-EEEESSCEEE
T ss_pred ccchhHHHHHHHHHHHHhhCHHHHHHHHhC------------------ccccccccceeeeecCCcccc-cccCCCCeEE
Confidence 999999999999999999999999999974 356799999999999999987 7999999999
Q ss_pred cceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHh
Q 044178 250 NGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFH 329 (366)
Q Consensus 250 ~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~ 329 (366)
+||.||+|+.|.++.+++||||++|+||++|+||||. ..|+|||+|+|.|+|++||++|+++++++|+++
T Consensus 312 ~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~----------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~r 381 (412)
T 4dnj_A 312 AGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT----------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381 (412)
T ss_dssp TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC----------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999974 258999999999999999999999999999999
Q ss_pred c-eeecCCCCCCCCCCcccccceeeecCCceEEeeec
Q 044178 330 F-DWKLPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 330 f-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
| ++++.++. ....+.++++..++.|+++|
T Consensus 382 f~~~~l~~~~-------~~~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 382 VAAIEIAGPL-------KRRFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp EEEEEECSCC-------EEEECSSBEEEEECEEEEEE
T ss_pred CCCCeECCCC-------eeecCCCccCCcceeEEEEe
Confidence 9 89986542 22345566777788888775
No 65
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.6e-47 Score=354.84 Aligned_cols=270 Identities=16% Similarity=0.205 Sum_probs=223.3
Q ss_pred CCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccCCCCc---ccccc------hhccCCCceEecC
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFAQRPL---LVSAK------FTSYDYTNIGLAP 126 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~~~~~---~~~~~------~~~~~~~~~~~~~ 126 (366)
.+++.++.+++++ |||+++.. ++.++++|++++.+++++.+. ..|+..+. ..... .....+.+ .+..
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~ 114 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPN-FIAM 114 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCC-GGGC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCc-cccc
Confidence 4689999999876 99999987 567899999999999999865 44554331 11110 01111222 3455
Q ss_pred CChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------------------
Q 044178 127 YGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------------------- 165 (366)
Q Consensus 127 ~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------------------- 165 (366)
+|+.|+++|+++ .+.|+.+.++.+.+.+.+.+.++++.
T Consensus 115 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~ 193 (426)
T 3rwl_A 115 DRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWSD 193 (426)
T ss_dssp CTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHHHHTCCGGGTHHHHHHHH
T ss_pred CchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 699999999997 78899999999998888888888765
Q ss_pred -------------------------------------------------------------------hhhhccccchHHH
Q 044178 166 -------------------------------------------------------------------DIFVAGSDTSSTS 178 (366)
Q Consensus 166 -------------------------------------------------------------------~~~~ag~~tt~~~ 178 (366)
.+++||+|||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~ 273 (426)
T 3rwl_A 194 VTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNS 273 (426)
T ss_dssp HHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHCGGGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCC
Q 044178 179 VEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENT 258 (366)
Q Consensus 179 l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~ 258 (366)
++|++++|++||++|+++++|+ +|++++|+|+||++|+++.. +|.+.+|++++||.||+|+
T Consensus 274 l~~~l~~L~~~P~~~~~lr~E~------------------~~l~a~i~E~LRl~p~~~~~-~R~~~~d~~l~G~~Ip~G~ 334 (426)
T 3rwl_A 274 MTGGVLALHKNPDQFAKLKANP------------------ALVETMVPEIIRWQTPLAHM-RRTAIADSELGGKTIRKGD 334 (426)
T ss_dssp HHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBCCE-EEEESSCEEETTEEECTTC
T ss_pred HHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHHHHHhcCccccC-ceecCCCeEECCEEECCCC
Confidence 9999999999999999999973 48999999999999999985 7999999999999999999
Q ss_pred EEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCC
Q 044178 259 RIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNG 337 (366)
Q Consensus 259 ~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 337 (366)
.|.++.+++||||++|+||++|+|+||.+ ..++|||+|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 335 ~V~~~~~~~~rDp~~f~dP~~F~p~R~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 405 (426)
T 3rwl_A 335 KVVMWYYSGNRDDEVIDRPEEFIIDRPRP---------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAE 405 (426)
T ss_dssp EEEECHHHHTTCTTTSSSTTSCCTTCSCT---------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred EEEechHHhCCCccccCCcCccCCCCCCC---------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCC
Confidence 99999999999999999999999999943 3689999999999999999999999999999999 9998754
Q ss_pred CCCCCCCcccccceeeecCCceEEeeec
Q 044178 338 MKQDHLDMSEVFGLTIRRKNDLLLIPVP 365 (366)
Q Consensus 338 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 365 (366)
.. . ......+...++.|+++|
T Consensus 406 ~~-----~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 406 PE-----R--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp CE-----E--CCCSSBCCEEECEEEEEC
T ss_pred Cc-----c--cccccccCcceeeEEEeC
Confidence 32 1 122334445566666654
No 66
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=6e-48 Score=357.60 Aligned_cols=268 Identities=20% Similarity=0.263 Sum_probs=221.5
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhc--------cCCCceEecCC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTS--------YDYTNIGLAPY 127 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 127 (366)
..+++.++.++ ++||||+++++| +++|++++.+++++.+ ...+++++......... ..+.++. ..+
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~d 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQRQLAAETQPRPQGPASFL-FLD 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHHHHHC---------CCCGG-GCC
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccccccccccccccccccchh-hcC
Confidence 56899999998 578999998775 8999999999999975 34445544322111110 1123333 446
Q ss_pred ChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh------------------------------------------
Q 044178 128 GSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------ 165 (366)
Q Consensus 128 ~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------ 165 (366)
|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 102 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 180 (418)
T 3r9b_A 102 PPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLDAVDGPEFNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALL 180 (418)
T ss_dssp TTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHHTCCSSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH
T ss_pred CchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHhhhccCCeehHHHHhCcCCHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999998 78899999888888887777766641
Q ss_pred -----------------------------------------------------------------------hhhhccccc
Q 044178 166 -----------------------------------------------------------------------DIFVAGSDT 174 (366)
Q Consensus 166 -----------------------------------------------------------------------~~~~ag~~t 174 (366)
.+++||+||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eT 260 (418)
T 3r9b_A 181 AAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCNLLLIAGHET 260 (418)
T ss_dssp HHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHT
T ss_pred HhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhhccCCCCHHHHHHHHHHHHHHhHHH
Confidence 678999999
Q ss_pred hHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceee
Q 044178 175 SSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAI 254 (366)
Q Consensus 175 t~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~i 254 (366)
|+.+++|++++|++||++|+|+++|++ |++++|+|+||++|+++.. +|.+.+|++++||.|
T Consensus 261 Ta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~-~R~~~~d~~l~g~~I 321 (418)
T 3r9b_A 261 TVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEETMRYDPPVQLV-SRYAGDDLTIGTHTV 321 (418)
T ss_dssp HHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCCE-EEEESSCEEETTEEE
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHHHHHhCCccccc-eeEeCCCeEECCEEE
Confidence 999999999999999999999999853 6899999999999999987 699999999999999
Q ss_pred CCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eee
Q 044178 255 PENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWK 333 (366)
Q Consensus 255 p~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~ 333 (366)
|+|+.|.++.+++||||++|+||++|+|||. ...++|||+|+|.|+|++||.+|+++++++++++| +++
T Consensus 322 p~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~----------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 391 (418)
T 3r9b_A 322 PKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA----------QIRHLGFGKGAHFCLGAPLARLEATVALPALAARFPEAR 391 (418)
T ss_dssp CTTCEEEECHHHHTTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCCEEEEChHHhcCCcccCCCcCcCCCCCC----------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHHHhCccce
Confidence 9999999999999999999999999999992 23689999999999999999999999999999999 899
Q ss_pred cCCCCCCCCCCcccccceeeecCCceEEeeecC
Q 044178 334 LPNGMKQDHLDMSEVFGLTIRRKNDLLLIPVPH 366 (366)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 366 (366)
+.++. ....+.++++..++.|++++|
T Consensus 392 l~~~~-------~~~~~~~~~~~~~lpv~~~~r 417 (418)
T 3r9b_A 392 LSGEP-------EYKRNLTLRGMSTLSIAVHHH 417 (418)
T ss_dssp ECSCC-------EECSCSSBCCEEECEEEC---
T ss_pred eCCCC-------ccccCCcccCcceeEEEecCC
Confidence 87542 223355678888888888876
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=4.1e-48 Score=356.20 Aligned_cols=243 Identities=19% Similarity=0.286 Sum_probs=199.5
Q ss_pred HHHHHHhcCCeeEEecC-Ce---eEEEeCCHHHHHHHHhhCCcccCCCCc------ccccchh--ccCCCceEecCCChh
Q 044178 63 LRDLTQKHGPLMHLKLG-EV---STIVVSSQEIAKEVLKTHDLVFAQRPL------LVSAKFT--SYDYTNIGLAPYGSY 130 (366)
Q Consensus 63 ~~~~~~kyG~i~~~~~~-~~---~~vvv~~~~~v~~il~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~ 130 (366)
+.+|+++ |||++++++ |. ++++|+|++.+++++.++. .|+.++. ....... ...+.++.+ .+|+.
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~ 95 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMD-YDPPE 95 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGG-CCTTH
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccc-cCCHH
Confidence 4457766 999999875 55 8999999999999993232 3555543 1101100 112334444 46999
Q ss_pred HHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------------
Q 044178 131 WRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------------- 165 (366)
Q Consensus 131 w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------------- 165 (366)
|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 96 ~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 174 (398)
T 1lfk_A 96 HTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRDMFMKLCHGHL 174 (398)
T ss_dssp HHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHTT
T ss_pred HHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999998 67789888888877777777666643
Q ss_pred ---------------------------------------------------------hhhhccccchHHHHHHHHHHHhh
Q 044178 166 ---------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLK 188 (366)
Q Consensus 166 ---------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~ 188 (366)
++++||+|||+.+++|++++|++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~ 254 (398)
T 1lfk_A 175 DASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLR 254 (398)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 56789999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhh
Q 044178 189 NPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIG 268 (366)
Q Consensus 189 ~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~ 268 (366)
||++|+|+++|++ |++|+|+|+||++|+++..++|.+.+|++++||.||+|+.|.++.+++|
T Consensus 255 ~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~ 316 (398)
T 1lfk_A 255 HPEQIDAFRGDEQ------------------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAAN 316 (398)
T ss_dssp SGGGGGGGSSCHH------------------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHT
T ss_pred CHHHHHHHHhCHH------------------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhC
Confidence 9999999999864 6899999999999999965589999999999999999999999999999
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCC
Q 044178 269 RDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNG 337 (366)
Q Consensus 269 ~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 337 (366)
|||++|+||++|+||||. ..++|||+|+|.|+|++||.+|+++++++++++| ++++.++
T Consensus 317 rdp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 376 (398)
T 1lfk_A 317 RDPALAPDVDRLDVTREP----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADP 376 (398)
T ss_dssp TCTTTCTTTTSCCTTSCC----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESST
T ss_pred CCchhcCCccccCCCCCC----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCC
Confidence 999999999999999983 2589999999999999999999999999999999 8998643
No 68
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.5e-47 Score=352.15 Aligned_cols=267 Identities=16% Similarity=0.247 Sum_probs=203.9
Q ss_pred CCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhhCCcccC-C-CCcc--cccc---hhccCCCceEecCC
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKTHDLVFA-Q-RPLL--VSAK---FTSYDYTNIGLAPY 127 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~~~~~~~-~-~~~~--~~~~---~~~~~~~~~~~~~~ 127 (366)
..+++..+.+| ++||||+++++ ++.++++++|++.+++++.++ .|+ . ++.. .... .....+.++.+.
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 56899999999 99999999998 899999999999999999864 254 3 3221 1110 001012233222
Q ss_pred ChhHHHHHHHHHhhhcchhhhhhhhhhHHHHH------------------------------------------------
Q 044178 128 GSYWRQLRRICTVELLSTKRVQSFRSIREEEV------------------------------------------------ 159 (366)
Q Consensus 128 ~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 159 (366)
.|+++|+.+ .+.|+.+ ++.+.+.+.+++
T Consensus 90 --~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 165 (396)
T 1n40_A 90 --ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLS 165 (396)
T ss_dssp --HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHHHTHH
T ss_pred --HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHHHhCCChhhHHHHHHHHH
Confidence 788888876 3334432 222111111111
Q ss_pred --------------------------------------HHHHh-----h--------------hhhhccccchHHHHHHH
Q 044178 160 --------------------------------------SNLIK-----T--------------DIFVAGSDTSSTSVEWA 182 (366)
Q Consensus 160 --------------------------------------~~l~~-----~--------------~~~~ag~~tt~~~l~~~ 182 (366)
..+++ . ++++||+|||+.+++|+
T Consensus 166 ~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~~~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~ 245 (396)
T 1n40_A 166 IAFMSSADPIPAAKINWDRDIEYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTA 245 (396)
T ss_dssp HHTBCCSSCCHHHHHHHHHHHHHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccCCCHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 11110 0 56789999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEee
Q 044178 183 MAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIV 262 (366)
Q Consensus 183 l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~ 262 (366)
+++|++||++|+|+++|+ .|++|+|+|+||++|+++..++|.+.+|++++||.||+|+.|.+
T Consensus 246 l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~ 307 (396)
T 1n40_A 246 LISLIQRPQLRNLLHEKP------------------ELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLV 307 (396)
T ss_dssp HHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEE
T ss_pred HHHHHcChHHHHHHHhCH------------------HHHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCCEEEe
Confidence 999999999999999985 37999999999999999955589999999999999999999999
Q ss_pred cchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCC
Q 044178 263 NAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQD 341 (366)
Q Consensus 263 ~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~ 341 (366)
+.+++||||++|+||++|+||||.+ ..++|||+|+|.|+|+++|.+|++++++.++++| ++++.++..
T Consensus 308 ~~~~~~rdp~~~~dP~~F~PeR~~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~-- 376 (396)
T 1n40_A 308 LLEGANFDPEHFPNPGSIELDRPNP---------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPID-- 376 (396)
T ss_dssp CHHHHHTCTTTSSSTTSCCTTCSST---------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG--
T ss_pred chHHhhCChhhCCChhhCCCCCCCC---------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCcc--
Confidence 9999999999999999999999963 3689999999999999999999999999999999 599876422
Q ss_pred CCCcccccceeeecCCceEEe
Q 044178 342 HLDMSEVFGLTIRRKNDLLLI 362 (366)
Q Consensus 342 ~~~~~~~~~~~~~p~~~~~~~ 362 (366)
++.. ..+.+++...++.++
T Consensus 377 ~~~~--~~~~~~~~~~~lpv~ 395 (396)
T 1n40_A 377 QLVW--RTRFQRRIPERLPVL 395 (396)
T ss_dssp GCCB--CCSBSBCCBSCCEEE
T ss_pred cccc--ccccccCCcceeeee
Confidence 2222 234456666777665
No 69
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.2e-47 Score=356.54 Aligned_cols=245 Identities=20% Similarity=0.256 Sum_probs=210.4
Q ss_pred chHHHHHHHHhcCCee--EEe-cCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhc-------------cCCCce
Q 044178 59 PHHSLRDLTQKHGPLM--HLK-LGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTS-------------YDYTNI 122 (366)
Q Consensus 59 ~~~~~~~~~~kyG~i~--~~~-~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 122 (366)
++..+.++ ++||||+ +++ +++.++++|++++.+++++.++ ..|+.++......... ..+.+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~- 123 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVES- 123 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCC-
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccC-
Confidence 78888888 6789999 888 6889999999999999999755 6677665433211100 01123
Q ss_pred EecCCChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------
Q 044178 123 GLAPYGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------- 165 (366)
Q Consensus 123 ~~~~~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------- 165 (366)
.+..+|+.|+++|+++ .+.|+.+.++.+.+.+.++++++++.
T Consensus 124 l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~ 202 (450)
T 3tkt_A 124 LVQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEPKM 202 (450)
T ss_dssp GGGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHH
T ss_pred cccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHHcCCChhHHHHH
Confidence 3455699999999998 78899999888888887777777654
Q ss_pred --------------------------------------------------------------------------------
Q 044178 166 -------------------------------------------------------------------------------- 165 (366)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (366)
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~ 282 (450)
T 3tkt_A 203 LFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAVVDGEPMSDRDTAGY 282 (450)
T ss_dssp HHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECCHHHHHHH
T ss_pred HHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhccccCCCCCHHHHHHH
Confidence
Q ss_pred --hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccc
Q 044178 166 --DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRES 243 (366)
Q Consensus 166 --~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~ 243 (366)
.+++||+|||+.+++|++++|++||++|+|+++|+ +|++++|+|+||++|+++.. +|.+
T Consensus 283 ~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~-~R~~ 343 (450)
T 3tkt_A 283 YIITASAGHDTTSASSAGAALALARDPDLFARVKADR------------------NLLPGIVEEAIRWTTPVQHF-MRTA 343 (450)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBCEE-EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH------------------HHHHHHHHHHHHhCCCccCc-ceee
Confidence 67899999999999999999999999999999985 47999999999999999954 8999
Q ss_pred cCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHH
Q 044178 244 RESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPL 323 (366)
Q Consensus 244 ~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l 323 (366)
.+|++++||.||+|+.|.++.+++||||++|+||++|+|||+- ..++|||+|+|.|+|++||.+|+++++
T Consensus 344 ~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l 413 (450)
T 3tkt_A 344 ATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA----------NRHLAFGAGSHQCLGLHLARLEMRVLL 413 (450)
T ss_dssp SSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT----------TCSSTTCCSTTCCTTHHHHHHHHHHHH
T ss_pred CCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC----------CCCCCCCCcCccCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999942 258999999999999999999999999
Q ss_pred HHHHHhce-eecCC
Q 044178 324 AQLLFHFD-WKLPN 336 (366)
Q Consensus 324 ~~ll~~f~-~~~~~ 336 (366)
+.|+++|+ +++.+
T Consensus 414 ~~ll~~f~~~~l~~ 427 (450)
T 3tkt_A 414 DVLLDRVDSLELAG 427 (450)
T ss_dssp HHHHHHEEEEEESS
T ss_pred HHHHHhCCCceeCC
Confidence 99999998 67653
No 70
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=4.9e-47 Score=352.51 Aligned_cols=248 Identities=14% Similarity=0.204 Sum_probs=208.7
Q ss_pred CCchHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHhhCCcccCCCCcc--c-ccchhccCCCceEecC
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLKTHDLVFAQRPLL--V-SAKFTSYDYTNIGLAP 126 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 126 (366)
.+++.++.+++ +||||++++++ +.++++|+|++.+++++.++ ..|++++.. . ........+.++.+ .
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~-~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIV-L 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGG-C
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhcccccc-C
Confidence 46888999996 79999999986 77899999999999999865 457766531 1 11111111234444 4
Q ss_pred CChhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-----------------------------------------
Q 044178 127 YGSYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT----------------------------------------- 165 (366)
Q Consensus 127 ~~~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------------------- 165 (366)
+|+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~ 199 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFH 199 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHH
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 699999999998 67788877777666666555555432
Q ss_pred ----------------------------------------------------------------------hhhhccccch
Q 044178 166 ----------------------------------------------------------------------DIFVAGSDTS 175 (366)
Q Consensus 166 ----------------------------------------------------------------------~~~~ag~~tt 175 (366)
.+++||+|||
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~dTt 279 (435)
T 2wm5_A 200 WTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETT 279 (435)
T ss_dssp HHHHHHHTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhhHHH
Confidence 6789999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeC
Q 044178 176 STSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIP 255 (366)
Q Consensus 176 ~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip 255 (366)
+.+++|++++|++||++|+|+++|++ +|++|+|+|+||++|+++. ++|.+.+|++++||.||
T Consensus 280 ~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip 341 (435)
T 2wm5_A 280 RNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEEIVRWASPVVY-MRRTLTQDIELRGTKMA 341 (435)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHHHHHHHCSBCC-EEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHHHHhhcCcccC-cceEeCCCeeECCEEEC
Confidence 99999999999999999999999975 3799999999999999994 58999999999999999
Q ss_pred CCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCC-CCCCCccHHHHHHHHHHHHHHHHHhce-ee
Q 044178 256 ENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGA-GRRICPGITFAIPNIELPLAQLLFHFD-WK 333 (366)
Q Consensus 256 ~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~-G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~ 333 (366)
+|+.|.++.+++||||++|+||++|+|||+ + ..++|||+ |+|.|+|++||.+|++++++.++++|+ ++
T Consensus 342 ~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~--~--------~~~lpFG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~ 411 (435)
T 2wm5_A 342 AGDKVSLWYCSANRDESKFADPWTFDLARN--P--------NPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVV 411 (435)
T ss_dssp TTCEEEECHHHHTTCTTTSSSTTCCCTTCC--S--------CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred CCCEEEeCHHHhcCCcccCcCCCccCCCCC--C--------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccE
Confidence 999999999999999999999999999993 1 35899999 999999999999999999999999997 99
Q ss_pred cCC
Q 044178 334 LPN 336 (366)
Q Consensus 334 ~~~ 336 (366)
+.+
T Consensus 412 l~~ 414 (435)
T 2wm5_A 412 ATE 414 (435)
T ss_dssp ECS
T ss_pred ECC
Confidence 865
No 71
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=2.4e-45 Score=334.33 Aligned_cols=261 Identities=17% Similarity=0.275 Sum_probs=204.3
Q ss_pred chHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCc-----cccc--ch--hcc-CCCceEecCCC
Q 044178 59 PHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPL-----LVSA--KF--TSY-DYTNIGLAPYG 128 (366)
Q Consensus 59 ~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~~~~~~~~ 128 (366)
++..+.++ ++||||+++ + +.+++++++.+++++.+. ..|++++. .... .. ... .+.++. ..+|
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTML-TSDP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGG-GCCT
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccc-cCCC
Confidence 45677888 599999987 4 589999999999999864 45776653 1100 01 110 113343 4469
Q ss_pred hhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------------
Q 044178 129 SYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------- 165 (366)
Q Consensus 129 ~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------- 165 (366)
+.|+++|+.+ .+.|+.+.++.+.+.+.++++++++.
T Consensus 74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 152 (368)
T 1io7_A 74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVA 152 (368)
T ss_dssp THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCT
T ss_pred hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 9999999997 56676665555444444433333321
Q ss_pred ----------------------------------------------------hhhhccccchHHHHHHHHHHHhhCHHHH
Q 044178 166 ----------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLKNPRIL 193 (366)
Q Consensus 166 ----------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~ 193 (366)
++++||+|||+.+++|++++|++|| +|
T Consensus 153 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~d~l~~ll~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~ 231 (368)
T 1io7_A 153 FRLGKPGEIFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LW 231 (368)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTSSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CH
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhccCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HH
Confidence 4578999999999999999999999 99
Q ss_pred HHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcCCCC
Q 044178 194 KEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSY 273 (366)
Q Consensus 194 ~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~ 273 (366)
+|+++| + |++|+|+|+||++|+++. ++|.+.+|++++||.||+|+.|.++.+++||||++
T Consensus 232 ~~l~~E--~-----------------~l~a~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~ 291 (368)
T 1io7_A 232 QRIREE--N-----------------LYLKAIEEALRYSPPVMR-TVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEV 291 (368)
T ss_dssp HHHHHH--T-----------------CHHHHHHHHHHHSCSBCC-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred HHHHhc--c-----------------hHHHHHHHHHHhCccccc-CceeeCCCeeECCEEECCCCEEEecHhhhCCChhh
Confidence 999998 2 689999999999999994 48999999999999999999999999999999999
Q ss_pred CCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhce-eecCCCCCCCCCCccccccee
Q 044178 274 WSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFD-WKLPNGMKQDHLDMSEVFGLT 352 (366)
Q Consensus 274 ~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~ 352 (366)
|+||++|+|||+ + ..++|||+|+|.|+|+++|.+|+++++++++++|+ +++.+ . ... ...+
T Consensus 292 ~~dP~~F~PeR~--~--------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~-----~~~--~~~~ 353 (368)
T 1io7_A 292 FHDGEKFIPDRN--P--------NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD-T-----EKV--PNEV 353 (368)
T ss_dssp STTTTSCCTTCC--S--------CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE-E-----EEC--CCSS
T ss_pred CCCcceeCCCCC--C--------CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC-c-----eec--cCCc
Confidence 999999999993 1 25899999999999999999999999999999996 99864 1 111 1334
Q ss_pred eecCCceEEeeecC
Q 044178 353 IRRKNDLLLIPVPH 366 (366)
Q Consensus 353 ~~p~~~~~~~~~~~ 366 (366)
.++..++.+++++|
T Consensus 354 ~~~~~~lpv~~~~r 367 (368)
T 1io7_A 354 LNGYKRLVVRLKSN 367 (368)
T ss_dssp BCCEEEEEEEEEC-
T ss_pred ccCCceeEEEeccC
Confidence 56666888888876
No 72
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=2.1e-45 Score=337.52 Aligned_cols=246 Identities=20% Similarity=0.254 Sum_probs=205.5
Q ss_pred CCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHHHH
Q 044178 57 SLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLRR 136 (366)
Q Consensus 57 ~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~ 136 (366)
.+++.++.+++++ |||+++..| .++|++++.+++++.+. .|+.++...........+.+ .+..+|+.|+++|+
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~-l~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDT-ALGSDPPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGS-GGGCCTTHHHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccchhcccc-cccCCchHHHHHHH
Confidence 4788999888665 899987643 68999999999999643 34433211111100011223 34567999999999
Q ss_pred HHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------------------
Q 044178 137 ICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------------------- 165 (366)
Q Consensus 137 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------------------- 165 (366)
++ .+.|+++.++.+.+.+.+.++++++.
T Consensus 93 ~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~p 171 (394)
T 2wiy_A 93 QT-NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLMQSAEP 171 (394)
T ss_dssp HH-HTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGGGSSSC
T ss_pred HH-HhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHhccCCc
Confidence 97 78899888888887777777777764
Q ss_pred ---------------------------------------------------------hhhhccccchHHHHHHHHHHHhh
Q 044178 166 ---------------------------------------------------------DIFVAGSDTSSTSVEWAMAEMLK 188 (366)
Q Consensus 166 ---------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l~~ 188 (366)
.+++||+|||+.+++|++++|++
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~Ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~ 251 (394)
T 2wiy_A 172 ADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIELFAR 251 (394)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHhhhcCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 67889999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhh
Q 044178 189 NPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIG 268 (366)
Q Consensus 189 ~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~ 268 (366)
||++|+++++|+ .|++++|+|+||++|+++.. +|.+.+|++++||.||+|+.|.++.+++|
T Consensus 252 ~P~~~~~l~~e~------------------~~l~a~i~E~LRl~pp~~~~-~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~ 312 (394)
T 2wiy_A 252 RPEVFTAFRNDE------------------SARAAIINEMVRMDPPQLSF-LRFPTEDVEIGGVLIEAGSPIRFMIGAAN 312 (394)
T ss_dssp CHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEE-EEEESSCEEETTEEECTTCCEEEEHHHHT
T ss_pred CHHHHHHHHhCh------------------HhHHHHHHHHHhhCCCccCe-eEEECCCEEEcCeecCCCCEEEeChHhhc
Confidence 999999999875 46899999999999999865 79999999999999999999999999999
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhce-eecCCC
Q 044178 269 RDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFD-WKLPNG 337 (366)
Q Consensus 269 ~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~ 337 (366)
|||++|+||++|+||||+++ ..++|||+|+|.|+|++||++|+++++++++++|+ +++.++
T Consensus 313 rdp~~~~dP~~F~p~R~~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~ 374 (394)
T 2wiy_A 313 RDPEVFDDPDVFDHTRPPAA--------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEE 374 (394)
T ss_dssp TCTTTSSSTTSCCTTCCGGG--------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSC
T ss_pred CCcccCCCccccCCCCCCCC--------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCC
Confidence 99999999999999999742 25899999999999999999999999999999998 998753
No 73
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=6.6e-46 Score=343.23 Aligned_cols=250 Identities=20% Similarity=0.306 Sum_probs=207.0
Q ss_pred CCCchHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCccccc-----chhccCCCceEecCCChh
Q 044178 56 ASLPHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSA-----KFTSYDYTNIGLAPYGSY 130 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 130 (366)
..+++.+ ++.++|||++++++++.. ++|++++.+++++.++...+..+...... ..... ..+..+..+|+.
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~ 107 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDF-MVDFLQSLDGAD 107 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHH-HHHSGGGCCHHH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhh-hcCccccCCchH
Confidence 4567777 566789999999887666 99999999999998653211111100000 00000 012334567999
Q ss_pred HHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHhh---------------------------------------------
Q 044178 131 WRQLRRICTVELLSTKRVQSFRSIREEEVSNLIKT--------------------------------------------- 165 (366)
Q Consensus 131 w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------------------------------------- 165 (366)
|+++|+++ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 108 h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~g~~d~~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~ 186 (416)
T 3p3o_A 108 HRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQGDFDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETNLG 186 (416)
T ss_dssp HHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTCCSSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHTTCGG
T ss_pred HHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhh
Confidence 99999998 78899999988888888888777653
Q ss_pred --------------------------------------------------------------hhhhccccchHHHHHHHH
Q 044178 166 --------------------------------------------------------------DIFVAGSDTSSTSVEWAM 183 (366)
Q Consensus 166 --------------------------------------------------------------~~~~ag~~tt~~~l~~~l 183 (366)
.+++||+|||+.+++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l 266 (416)
T 3p3o_A 187 LALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAM 266 (416)
T ss_dssp GTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhccCCCCHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 578999999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeec
Q 044178 184 AEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVN 263 (366)
Q Consensus 184 ~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~ 263 (366)
++|++||++|+|+++|++ |++++++|+||++|+++...+|.+.+|++++||.||+|+.|.++
T Consensus 267 ~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~ 328 (416)
T 3p3o_A 267 YDFAQHPDQWMKIKENPE------------------LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMC 328 (416)
T ss_dssp HHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEEC
T ss_pred HHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhccccccCcceEeCCCeEECCEEECCCCEEEEC
Confidence 999999999999999853 78999999999999997666899999999999999999999999
Q ss_pred chhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCC
Q 044178 264 AWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNG 337 (366)
Q Consensus 264 ~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 337 (366)
.+++||||++|+||++|+|+||.+ ..++|||+|+|.|+|++||.+|++++++.|+++| ++++.++
T Consensus 329 ~~~~~rdp~~~~dp~~F~p~R~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~ 394 (416)
T 3p3o_A 329 AHVAHRDPRVFADADRFDITVKRE---------APSIAFGGGPHFCLGTALARLELTEAVAALATRLDPPQIAGE 394 (416)
T ss_dssp HHHHTTCTTTCTTTTSCCTTCCCS---------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSC
T ss_pred hHHhcCChhccCCccccCCCCCCC---------CCeecCCCCCccCcCHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 999999999999999999999742 2589999999999999999999999999999999 5887654
No 74
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=6.2e-45 Score=331.21 Aligned_cols=257 Identities=16% Similarity=0.217 Sum_probs=198.9
Q ss_pred chHHHHHHHHhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCc-cc-cc-----chhccC---CCceEecCCC
Q 044178 59 PHHSLRDLTQKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPL-LV-SA-----KFTSYD---YTNIGLAPYG 128 (366)
Q Consensus 59 ~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~-~~-~~-----~~~~~~---~~~~~~~~~~ 128 (366)
++..+.++ ++||||++++ | ++++++++.+++++.++ ..|+.++. .. .. .....+ ..++.+. +|
T Consensus 1 p~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DP 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cc
Confidence 35677777 4799999987 3 89999999999999865 35666532 11 11 100111 1444444 69
Q ss_pred hhHHHHHHHHHhhhcchhhhhhhhhhHHHHHHHHHh--------------------------------------------
Q 044178 129 SYWRQLRRICTVELLSTKRVQSFRSIREEEVSNLIK-------------------------------------------- 164 (366)
Q Consensus 129 ~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-------------------------------------------- 164 (366)
+.|+++|+++ .+.|+.+.++. +.+.+.++++++
T Consensus 74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 150 (367)
T 3b4x_A 74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALR 150 (367)
T ss_dssp THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHHHcCCCCcHHHHHHHHHHHHhc
Confidence 9999999997 56676554431 111111111000
Q ss_pred --------------------------h----------------------------hhhhccccchHHHHHHHHHHHhhCH
Q 044178 165 --------------------------T----------------------------DIFVAGSDTSSTSVEWAMAEMLKNP 190 (366)
Q Consensus 165 --------------------------~----------------------------~~~~ag~~tt~~~l~~~l~~l~~~p 190 (366)
. ++++||+|||+.+++|++++|++ |
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P 229 (367)
T 3b4x_A 151 LGRADEIFSIGRKYLELISFSKKELDSRKGKEIVDLTGKIANSNLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-Y 229 (367)
T ss_dssp TTSTTGGGCCCHHHHHHHHHHHHHHHHHTTTCCSSHHHHHHTSSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-T
T ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhccCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-H
Confidence 0 57889999999999999999999 9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchhhhcC
Q 044178 191 RILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWAIGRD 270 (366)
Q Consensus 191 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d 270 (366)
++|+|+++|++ +++|+|+||++|+++ .++|.+.+|++++||.||+|+.|.++.+++|||
T Consensus 230 ~~~~~l~~e~~--------------------~a~i~E~lRl~p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd 288 (367)
T 3b4x_A 230 NSWDYVREKGA--------------------LKAVEEALRFSPPVM-RTIRVTKEKVKIRDQVIDEGELVRVWIASANRD 288 (367)
T ss_dssp TCHHHHHHHCS--------------------HHHHHHHHHHSCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTC
T ss_pred HHHHHHHhCCc--------------------hHHHHHHHHhcCccc-CeeEEeCCCeEECCEEECCCCEEEEChhhhcCC
Confidence 99999999853 899999999999999 448999999999999999999999999999999
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCCCCCCCCccccc
Q 044178 271 PSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGMKQDHLDMSEVF 349 (366)
Q Consensus 271 ~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~ 349 (366)
|++|+||++|+||||. ..++|||+|+|.|+|+++|.+|+++++++++++| ++++.++ . ...
T Consensus 289 p~~~~dp~~F~PeR~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~-----~~~-- 350 (367)
T 3b4x_A 289 EEVFKDPDSFIPDRTP----------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK-E-----KID-- 350 (367)
T ss_dssp TTTSSSTTSCCTTCSS----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-E-----ECC--
T ss_pred cccCCCccccCCCCCC----------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc-c-----ccc--
Confidence 9999999999999984 2589999999999999999999999999999999 7998653 2 221
Q ss_pred ceeeecCCceEEeeec
Q 044178 350 GLTIRRKNDLLLIPVP 365 (366)
Q Consensus 350 ~~~~~p~~~~~~~~~~ 365 (366)
+...++..++.+++++
T Consensus 351 ~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 351 NEVLNGYRKLVVRVER 366 (367)
T ss_dssp CSSBCSEEEEEEEEEE
T ss_pred cccccCcceEEEEecC
Confidence 3344556677777654
No 75
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=1.4e-44 Score=326.06 Aligned_cols=226 Identities=21% Similarity=0.278 Sum_probs=182.4
Q ss_pred HhcCCeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHHHHHHHhhhcchhh
Q 044178 68 QKHGPLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQLRRICTVELLSTKR 147 (366)
Q Consensus 68 ~kyG~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~R~~l~~~~~~~~~ 147 (366)
++||||+++ | +++|+|++.+++++.++ ..|++++...... ..+.++.+ .+|+.|+++|+.+ .+.|+.+.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGISFIT-MDNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGG-CCHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---cccccccc-CCchHHHHHHHHh-hhhcCHHH
Confidence 589999986 4 89999999999999865 4576664211111 12344444 4699999999997 55566554
Q ss_pred hhhhhhhHHHHHHH------------------------------------------------------------------
Q 044178 148 VQSFRSIREEEVSN------------------------------------------------------------------ 161 (366)
Q Consensus 148 ~~~~~~~~~~~~~~------------------------------------------------------------------ 161 (366)
++.+.+.+.+++++
T Consensus 71 l~~~~~~i~~~~~~l~~~l~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 150 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNIDNKDIISEYAVRLPVNIISKILGIPDSDMPLFKLWSDYIIGNKRDENFNYVNNRMVSRLLE 150 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCTTSCHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHTSCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCHHHHHhhhhhHHHHHHHcCCCHHHHHHHHHHHHHHhhccCcchhhHHHHHHHHHHHH
Confidence 43332222211111
Q ss_pred ------------HHhh-----------------hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCH
Q 044178 162 ------------LIKT-----------------DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNE 212 (366)
Q Consensus 162 ------------l~~~-----------------~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~ 212 (366)
+++. ++++||+|||+.+++|++++|++||++|+|+++|+
T Consensus 151 ~~~~~i~~dl~~ll~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------ 218 (343)
T 2rfb_A 151 IFKSDSHGIINVLAGSSLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR------------ 218 (343)
T ss_dssp HHHSCCSSHHHHHHTCBCSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH------------
T ss_pred HHHHHHhccHHHHHhhhcCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc------------
Confidence 1110 56789999999999999999999999999999985
Q ss_pred HHhhcChhHHHHHHHHhccCCCC-CCCCcccccCCceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCC
Q 044178 213 AAIHELKFLKLVVKETLRLHPPA-PLLLPRESRESCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSID 291 (366)
Q Consensus 213 ~~l~~l~~l~a~i~E~lRl~~~~-~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~ 291 (366)
+|+|+|+||++|++ +. ++|.+.+|++++||.||+|+.|.++.+++||||++|+||++|+|||+
T Consensus 219 ---------~a~i~E~lRl~p~~~~~-~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~------ 282 (343)
T 2rfb_A 219 ---------SGFVEETLRYYSPIQFL-PHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGRR------ 282 (343)
T ss_dssp ---------HHHHHHHHHHSCSBCCB-CCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS------
T ss_pred ---------HHHHHHHHhhCcccccc-cceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCCC------
Confidence 89999999999999 84 58999999999999999999999999999999999999999999994
Q ss_pred CCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhce-eecCCC
Q 044178 292 YRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHFD-WKLPNG 337 (366)
Q Consensus 292 ~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~ 337 (366)
..++|||+|+|.|+|+++|.+|++++++.++++|+ +++.++
T Consensus 283 -----~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~ 324 (343)
T 2rfb_A 283 -----EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYK 324 (343)
T ss_dssp -----SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred -----CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCC
Confidence 25899999999999999999999999999999996 998763
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=4.5e-41 Score=309.96 Aligned_cols=249 Identities=15% Similarity=0.192 Sum_probs=199.4
Q ss_pred CCCchHHHHHHHHhcC-CeeEEecCCeeEEEeCCHHHHHHHHhhCCcccCCCCcccccchhccCCCceEecCCChhHHHH
Q 044178 56 ASLPHHSLRDLTQKHG-PLMHLKLGEVSTIVVSSQEIAKEVLKTHDLVFAQRPLLVSAKFTSYDYTNIGLAPYGSYWRQL 134 (366)
Q Consensus 56 ~~~~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~~~~~v~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~ 134 (366)
..+++..+.+++++.+ +++....+| .+++|++++.|++++.+. ..|+......... ............+++.|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDP-TRFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCc-hhccCCCcccccc-cccccccCcccCCcHHHHHH
Confidence 3578888888877654 355443333 578999999999999743 4565443221111 11112223344579999999
Q ss_pred HHHHHhhhcchhhhhhhhhhHHHHHHHHHhh-------------------------------------------------
Q 044178 135 RRICTVELLSTKRVQSFRSIREEEVSNLIKT------------------------------------------------- 165 (366)
Q Consensus 135 R~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~------------------------------------------------- 165 (366)
|+++ .+.|+.+.++.+.+.+.+.++++++.
T Consensus 113 Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~~~~~ 191 (417)
T 4dxy_A 113 RKAL-DKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTRPEGN 191 (417)
T ss_dssp HHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHTTSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCCS
T ss_pred HHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhcccccc
Confidence 9998 78899999999999999999888875
Q ss_pred -----------------------------------------------------------hhhhccccchHHHHHHHHHHH
Q 044178 166 -----------------------------------------------------------DIFVAGSDTSSTSVEWAMAEM 186 (366)
Q Consensus 166 -----------------------------------------------------------~~~~ag~~tt~~~l~~~l~~l 186 (366)
.+++||+|||+.+++|++++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~~ddl~s~L~~~~~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~~L 271 (417)
T 4dxy_A 192 TPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMIHL 271 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTCEETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhccccccCCccchhHHHHHHHHHHhhcccchhhHHHHHHHHH
Confidence 678999999999999999999
Q ss_pred hhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccCCceecceeeCCCCEEeecchh
Q 044178 187 LKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRESCEINGYAIPENTRIIVNAWA 266 (366)
Q Consensus 187 ~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~d~~l~g~~ip~g~~v~~~~~~ 266 (366)
++||++++++++|...+ ..++ |.+|++++.+.. +|.+.+|++++|+.||+|+.|.++.++
T Consensus 272 ~~~P~~~~~l~~e~~~~------------------~~av-ee~~~~~~~~~~-~R~a~~d~~l~G~~Ip~G~~V~~~~~a 331 (417)
T 4dxy_A 272 ARHPELVAELRSDPLKL------------------MRGA-EEMFRRFPVVSE-ARMVAKDQEYKGVFLKRGDMILLPTAL 331 (417)
T ss_dssp HTCHHHHHHHHHCHHHH------------------HHTH-HHHHHHSCCBEE-EEEECSCEEETTEEECTTCEEEEETHH
T ss_pred HhCchhhhhhccCcccc------------------ccce-eeeecccccccc-ccccccceEecCccccCCCEEEEeehh
Confidence 99999999999975543 2233 444444444444 699999999999999999999999999
Q ss_pred hhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-eeecCCCC
Q 044178 267 IGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQLLFHF-DWKLPNGM 338 (366)
Q Consensus 267 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~ 338 (366)
+||||++|+||++|+|||+ +..|+|||+|+|.|+|++||++|+++++++|+++| ++++.+++
T Consensus 332 ~~rDp~~f~dP~~FdpeR~----------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~ 394 (417)
T 4dxy_A 332 HGLDDAANPEPWKLDFSRR----------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGE 394 (417)
T ss_dssp HHTCTTTSSSTTSCCTTCS----------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTC
T ss_pred hcCChhhCCCccccCCCCC----------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCC
Confidence 9999999999999999993 24689999999999999999999999999999999 99987764
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.5e-42 Score=313.52 Aligned_cols=143 Identities=18% Similarity=0.180 Sum_probs=125.3
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhcCCCCCCHHHhhcChhHHHHHHHHhccCCCCCCCCcccccC
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFKGKENVNEAAIHELKFLKLVVKETLRLHPPAPLLLPRESRE 245 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~~~~~~~~~R~~~~ 245 (366)
.+++||+|||+.+++|++++|++||++++++++|++ |++++|+|+||++|+++.. +|.+.+
T Consensus 218 ~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~~~i~E~LR~~pp~~~~-~R~a~~ 278 (381)
T 2yjn_B 218 RALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA------------------AAQRTVAEVLRLHPALHLE-RRTATA 278 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------------------HHHHHHHHHHSCSCSEE-EEEESS
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH------------------HHHHHhCeeeeecCCCcce-eEEECC
Confidence 578999999999999999999999999999998752 8999999999999999975 799999
Q ss_pred CceecceeeCCCCEEeecchhhhcCCCCCCCCCCcCCCCCCCCCCCCCCCCCcccccCCCCCCCccHHHHHHHHHHHHHH
Q 044178 246 SCEINGYAIPENTRIIVNAWAIGRDPSYWSEAEALYPERFLNSSIDYRGKDFEYIPFGAGRRICPGITFAIPNIELPLAQ 325 (366)
Q Consensus 246 d~~l~g~~ip~g~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ 325 (366)
|++++|+.||+|+.|.++.+++|+||++|+||++|+|+||++ ..+++||+| |.|+|+++|.+|++++++.
T Consensus 279 d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~---------~~~l~FG~G-h~C~G~~lA~~e~~~~l~~ 348 (381)
T 2yjn_B 279 EVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA---------DRALSAHRG-HPGRLEELVTALATAALRA 348 (381)
T ss_dssp CEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC---------CCCCC-----CCSSHHHHHHHHHHHHHHH
T ss_pred CeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC---------CCccCCCCC-CCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999974 368999999 9999999999999999999
Q ss_pred HHHhc-eeecCCC
Q 044178 326 LLFHF-DWKLPNG 337 (366)
Q Consensus 326 ll~~f-~~~~~~~ 337 (366)
++++| ++++.++
T Consensus 349 ll~~~p~~~l~~~ 361 (381)
T 2yjn_B 349 AAKALPGLTPSGP 361 (381)
T ss_dssp TTTTCCC-----C
T ss_pred HHHhCCCcEECCC
Confidence 99999 9998765
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=66.00 E-value=27 Score=24.01 Aligned_cols=59 Identities=15% Similarity=0.251 Sum_probs=41.7
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
.--++|++..- -..+.+.+.-.+||+|..+.+. |.-+|...+.+.++..+..+...+.+
T Consensus 12 ~~lfV~~Lp~~---~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~g 78 (103)
T 1s79_A 12 RSVYIKGFPTD---ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKE 78 (103)
T ss_dssp GCEEEECCCTT---CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTT
T ss_pred CEEEEECCCCC---CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECC
Confidence 35678887544 2456788888999998888763 45667778999999888744433433
No 79
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=63.32 E-value=27 Score=22.46 Aligned_cols=51 Identities=14% Similarity=0.143 Sum_probs=37.0
Q ss_pred ceeeccccCCCC----chHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHhh
Q 044178 47 LIGNLHQLVASL----PHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 47 ~lG~~~~~~~~~----~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~~ 98 (366)
++||+..- ..+ ..+.+.+.-.+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 5 ~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCC-CTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCC-cHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 57887543 222 347788888999999988875 4456667899988887763
No 80
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=61.04 E-value=26 Score=21.97 Aligned_cols=56 Identities=16% Similarity=0.272 Sum_probs=37.7
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
++||+..- -..+.+.++-.+||+|..+.+. |.-++-..+++.++..+..+...+.+
T Consensus 3 ~v~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 67 (75)
T 1iqt_A 3 FVGGLSPD---TPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL 67 (75)
T ss_dssp EESCCCSS---CCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCBTT
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeECC
Confidence 46666433 2456788888999999888763 34456668888888888754433333
No 81
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=60.23 E-value=40 Score=23.40 Aligned_cols=57 Identities=25% Similarity=0.350 Sum_probs=41.8
Q ss_pred CCCCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEec------CCeeEEEeCCHHHHHHHHh
Q 044178 38 LPPGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL------GEVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 38 ~ppgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~------~~~~~vvv~~~~~v~~il~ 97 (366)
.||.|...-++||+..- -..+.+.++-.+||+|..+.+ -|.-+|-..+.+.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK---ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 45566667789998644 245678889999999988876 2455677788888877765
No 82
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=54.68 E-value=37 Score=21.26 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=37.7
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
++||+..- -..+.+.++-.+||+|..+.+. |.-++-..+.+.++..+..+...+.+
T Consensus 3 ~v~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g 67 (75)
T 2mss_A 3 FVGGLSVN---TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 67 (75)
T ss_dssp EEECCCSS---CCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCSSS
T ss_pred EEecCCCC---CCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEECC
Confidence 46776433 2456788899999998888763 23445668899988887644444443
No 83
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.73 E-value=42 Score=22.96 Aligned_cols=64 Identities=17% Similarity=0.193 Sum_probs=43.9
Q ss_pred CcceeeccccCCCC-chHHHHHHHHhcC-CeeEEecCCeeEEEeCCHHHHHHHHhh-CCcccCCCCcc
Q 044178 45 LPLIGNLHQLVASL-PHHSLRDLTQKHG-PLMHLKLGEVSTIVVSSQEIAKEVLKT-HDLVFAQRPLL 109 (366)
Q Consensus 45 ~P~lG~~~~~~~~~-~~~~~~~~~~kyG-~i~~~~~~~~~~vvv~~~~~v~~il~~-~~~~~~~~~~~ 109 (366)
+-+++|+..-...+ ....+.++..+|| .|..+ .+|.-+|...+.+.++..+.+ +...+.+++..
T Consensus 11 ~lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~ 77 (96)
T 2diu_A 11 LLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRII 77 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCE
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEE
Confidence 35589986552211 2235778889995 98888 679999999999998777643 55555555543
No 84
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=45.64 E-value=69 Score=21.78 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=42.8
Q ss_pred CCCcceeeccccCCCC----chHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 43 WRLPLIGNLHQLVASL----PHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~----~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
...-++||+..- ..+ ..+.+.++-.+||+|..+.+. |.-+|...+++.++..+.. ++..+.+
T Consensus 15 ~~~l~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g 88 (105)
T 2nlw_A 15 DSVIVVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDK 88 (105)
T ss_dssp CSEEEEESCCCC-CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECST
T ss_pred CCEEEEeCCCcc-hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCC
Confidence 346789998754 222 457789999999999998875 4556667888877776653 4444444
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=44.14 E-value=78 Score=21.99 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=42.1
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--CeeEEEeCCHHHHHHHHhh-CCcccCCCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--EVSTIVVSSQEIAKEVLKT-HDLVFAQRP 107 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--~~~~vvv~~~~~v~~il~~-~~~~~~~~~ 107 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|...+.+.++..+.. +...+..+.
T Consensus 18 ~l~V~nLp~~---~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 18 RVVVSGLPPS---GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp CEEEEECCSS---CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 5678998644 2356688888999998888774 5667777888888777653 444455443
No 86
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=42.78 E-value=47 Score=21.50 Aligned_cols=56 Identities=16% Similarity=0.230 Sum_probs=38.8
Q ss_pred CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCC
Q 044178 42 PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHD 100 (366)
Q Consensus 42 p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~ 100 (366)
+..--++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+..+.
T Consensus 10 ~~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~ 74 (87)
T 3s7r_A 10 DAGKMFVGGLSWD---TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKE 74 (87)
T ss_dssp CTTEEEEECCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCC
Confidence 3446688988644 2467788889999998887762 123455678888888776543
No 87
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=41.79 E-value=72 Score=20.93 Aligned_cols=53 Identities=8% Similarity=0.169 Sum_probs=38.0
Q ss_pred CCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC----CeeEEEeCCHHHHHHH
Q 044178 40 PGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG----EVSTIVVSSQEIAKEV 95 (366)
Q Consensus 40 pgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~vvv~~~~~v~~i 95 (366)
+-|+..-++|++..- -..+.+++.-.+||+|..+.+. |.-+|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~~---~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTED---MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCCC---CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 344456788997544 2456789999999999998875 5666777898888753
No 88
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=40.63 E-value=58 Score=22.93 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=43.1
Q ss_pred CCCCCCCcceeeccccCC-------CCchHHHHHHHHhcCCeeEEecC-----CeeEEEeCCHHHHHHHHh-hCCcccCC
Q 044178 39 PPGPWRLPLIGNLHQLVA-------SLPHHSLRDLTQKHGPLMHLKLG-----EVSTIVVSSQEIAKEVLK-THDLVFAQ 105 (366)
Q Consensus 39 ppgp~~~P~lG~~~~~~~-------~~~~~~~~~~~~kyG~i~~~~~~-----~~~~vvv~~~~~v~~il~-~~~~~~~~ 105 (366)
+|.|...-.|-|++.-.. .+..+.+++...+||.|..+.+. |.-+|-..+++.++..+. -++..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 567777777788776631 11223456666789999888763 445566678877765543 35555555
Q ss_pred CC
Q 044178 106 RP 107 (366)
Q Consensus 106 ~~ 107 (366)
|.
T Consensus 83 R~ 84 (114)
T 3s6e_A 83 KM 84 (114)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 89
>1jb0_M Photosystem 1 reaction centre subunit XII; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.19.1 PDB: 3pcq_M*
Probab=37.36 E-value=46 Score=17.37 Aligned_cols=27 Identities=19% Similarity=0.069 Sum_probs=17.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHh
Q 044178 1 MELQFPSFILISSLLLFLFKVAKILQQ 27 (366)
Q Consensus 1 m~~~~~~~~~~~~~~l~~~~~~~~~~~ 27 (366)
|.++...++.+.++.++...+...+..
T Consensus 1 m~Isd~Qi~iAL~~Al~~~iLA~rLg~ 27 (31)
T 1jb0_M 1 MALTDTQVYVALVIALLPAVLAFRLST 27 (31)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777777666666665555555544
No 90
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=36.66 E-value=79 Score=22.14 Aligned_cols=58 Identities=12% Similarity=0.155 Sum_probs=38.8
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|...+.+.++..+..+...+.+
T Consensus 38 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~~g 104 (124)
T 2jwn_A 38 SVYVGNVDYG---STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRG 104 (124)
T ss_dssp EEEEEEECTT---CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEETT
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeECC
Confidence 3568887543 2466788999999998877662 23456678888888877444444443
No 91
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=35.54 E-value=95 Score=20.51 Aligned_cols=60 Identities=13% Similarity=0.222 Sum_probs=42.3
Q ss_pred CCcceeeccc-cCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 44 RLPLIGNLHQ-LVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 44 ~~P~lG~~~~-~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
.--++||+.. - -..+.+.++..+||+|..+.+ -|.-+|-..+.+.++..+.. +...+.++
T Consensus 11 ~~l~V~nlp~~~---~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 73 (96)
T 2kvi_A 11 SRLFIGNLPLKN---VSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGK 73 (96)
T ss_dssp EEEEEESSTTSC---CCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBTT
T ss_pred CEEEEeCCCccc---CCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCCc
Confidence 3567888864 3 245778899999999888876 45666777899998887764 44444443
No 92
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.94 E-value=97 Score=20.44 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=39.7
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC------------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG------------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~------------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
.--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.. +...+.+
T Consensus 6 ~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 77 (98)
T 2cpf_A 6 SGLFIKNLNFS---TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDG 77 (98)
T ss_dssp CCEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETT
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 35678887544 2456788888999998777663 2345566889998888764 3333333
No 93
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=32.66 E-value=83 Score=21.60 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=41.4
Q ss_pred CCCCCCcceeeccccC--CCCchHHHHHHHHhcCCeeEEecC----------CeeEEEeCCHHHHHHHHh-hCCcccCCC
Q 044178 40 PGPWRLPLIGNLHQLV--ASLPHHSLRDLTQKHGPLMHLKLG----------EVSTIVVSSQEIAKEVLK-THDLVFAQR 106 (366)
Q Consensus 40 pgp~~~P~lG~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~~----------~~~~vvv~~~~~v~~il~-~~~~~~~~~ 106 (366)
+-|...-+++|++.-. ..+..+.+++...+||.|..+++. |.-+|-..+++.+..... -++..|.+|
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 3455667788876421 234567788888899998887652 223455578777665543 355556554
Q ss_pred C
Q 044178 107 P 107 (366)
Q Consensus 107 ~ 107 (366)
.
T Consensus 85 ~ 85 (105)
T 2pe8_A 85 V 85 (105)
T ss_dssp E
T ss_pred E
Confidence 3
No 94
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=32.51 E-value=1.3e+02 Score=21.06 Aligned_cols=60 Identities=10% Similarity=0.229 Sum_probs=42.4
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh-CCcccCCCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT-HDLVFAQRP 107 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~-~~~~~~~~~ 107 (366)
.-++||+..- -..+.+.++..+||+|..+.+. |.-+|...+.+.++..+.. +...+.++.
T Consensus 24 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 93 (126)
T 3ex7_B 24 ILFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 93 (126)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 5778887644 2456788889999999988773 4556777899998887753 444455443
No 95
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=32.48 E-value=1.1e+02 Score=20.47 Aligned_cols=53 Identities=15% Similarity=0.241 Sum_probs=36.5
Q ss_pred CcceeeccccCC---CCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVA---SLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~---~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
.-++||++.... .-..+.+.++-.+||+|..+.+. |.-+|...+++.++..+.
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 456788764310 11345688888899999988874 445677788888887764
No 96
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=32.30 E-value=1.2e+02 Score=20.86 Aligned_cols=58 Identities=17% Similarity=0.276 Sum_probs=39.8
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
--|+||+..- --.+.+.++-.+||+|..+.+. |.-+|-..+++.++..+.. +...+.+
T Consensus 7 ~lfV~nLp~~---~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~~g 72 (115)
T 4f25_A 7 NIFIKNLDKS---IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND 72 (115)
T ss_dssp EEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred EEEECCCCCC---CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEECC
Confidence 4678888644 2457788999999998877653 2345667899998887753 4443443
No 97
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=32.27 E-value=1.1e+02 Score=20.45 Aligned_cols=58 Identities=9% Similarity=0.185 Sum_probs=39.3
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
--++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+.. +...+.+
T Consensus 25 ~l~V~nlp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 92 (106)
T 1p27_B 25 ILFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG 92 (106)
T ss_dssp EEEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHHHTTCBSSS
T ss_pred EEEEeCCCCC---CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHHhcCCEECC
Confidence 4678887544 2456788999999998888763 2344556888888877753 4443443
No 98
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.11 E-value=85 Score=21.56 Aligned_cols=55 Identities=7% Similarity=0.072 Sum_probs=37.1
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCccc
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVF 103 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~ 103 (366)
-++||+..- -..+.+.++..+||.|..+.+. |.-+|-..+.+.++..+..+...+
T Consensus 28 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 91 (114)
T 2cq4_A 28 VFCMQLAAR---IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 91 (114)
T ss_dssp EEEESCCTT---CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEE
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEe
Confidence 568887543 2456788899999999888874 234566678777777664444333
No 99
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.89 E-value=1e+02 Score=21.24 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=39.6
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|...+.+.++..+..+...+.+
T Consensus 29 ~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 95 (116)
T 1x4b_A 29 KLFIGGLSFE---TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 95 (116)
T ss_dssp EEEEECCTTC---CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETT
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEECC
Confidence 4578887543 2456788899999998777652 24456668899998888754333333
No 100
>1jdm_A Sarcolipin; helix, membrane protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.51 E-value=39 Score=17.08 Aligned_cols=15 Identities=13% Similarity=0.178 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHH
Q 044178 12 SSLLLFLFKVAKILQ 26 (366)
Q Consensus 12 ~~~~l~~~~~~~~~~ 26 (366)
.++++++.++.+.+.
T Consensus 12 Ft~vLI~vlLi~llV 26 (31)
T 1jdm_A 12 FTIVLITVILMWLLV 26 (31)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444444443
No 101
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.65 E-value=1e+02 Score=19.62 Aligned_cols=53 Identities=17% Similarity=0.071 Sum_probs=36.6
Q ss_pred CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 42 PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 42 p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
|..--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 4 ~~~~l~v~nlp~~---~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 4 GSSGLYIRGLQPG---TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CCCEEEEESCCTT---CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3445678887544 2456688888899998887752 234566788888877765
No 102
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=30.61 E-value=1.3e+02 Score=21.12 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=39.1
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
.--++||+ .. ..+.+.++-.+||+|..+.+. |.-+|...+.+.++..+.. +...+.++
T Consensus 40 ~~lfVgnl-~~----te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~~g~ 101 (121)
T 2bz2_A 40 NTLYVYGE-DM----TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESV 101 (121)
T ss_dssp CEEEEECS-SC----CHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSC
T ss_pred CEEEEcCC-CC----CHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 35678883 33 467789999999998777764 4556667888888777643 44444433
No 103
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=30.40 E-value=1.1e+02 Score=19.88 Aligned_cols=51 Identities=20% Similarity=0.321 Sum_probs=36.3
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--------CeeEEEeCCHHHHHHHHh
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~vvv~~~~~v~~il~ 97 (366)
.--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 17 ~~l~v~nlp~~---~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 17 RTVFVGNLEAR---VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp GEEEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred CEEEEECCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 45678887544 2456789999999998887763 234556678888877765
No 104
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=29.60 E-value=1.3e+02 Score=20.43 Aligned_cols=54 Identities=17% Similarity=0.128 Sum_probs=39.2
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTH 99 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~ 99 (366)
..--++||+..- -..+.+.++..+||+|..+.+. |.-+|...+.+.++..+...
T Consensus 25 ~~~lfV~nLp~~---~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 25 GCKMFIGGLSWQ---TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp -CCEEEESCCTT---CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 346678987533 2456788899999999888763 24567778999998888654
No 105
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=29.40 E-value=1.3e+02 Score=20.13 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=41.8
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
..--++||+..- -..+.+.++-.+||+|..+.+ -+.-+|-..+.+.++..+.. +...+..
T Consensus 11 ~~~l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g 72 (103)
T 2dgu_A 11 VKVLFVRNLANT---VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEG 72 (103)
T ss_dssp CCCEEEECCCTT---CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHHHCCCccCC
Confidence 346688988644 245778899999999988876 34555667889988887763 4433433
No 106
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=28.69 E-value=1.2e+02 Score=19.46 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=36.2
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+++.++..+..+...+.+
T Consensus 10 ~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~~g 74 (89)
T 3ucg_A 10 YVGNVDYG---ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRG 74 (89)
T ss_dssp EEESCCTT---CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEETT
T ss_pred EEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEECC
Confidence 56776543 2456788888999998877652 13445567888887776544444443
No 107
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=28.61 E-value=1.4e+02 Score=20.34 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=39.5
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHhh-CCcccC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLKT-HDLVFA 104 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~~-~~~~~~ 104 (366)
--++||+..- -..+.+.++-.+||+|..+.+ -|.-+|-..+.+.++..+.. ++..+.
T Consensus 33 ~l~V~nLp~~---~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~l~g~~~~ 91 (108)
T 2jvo_A 33 RLFVRPFPLD---VQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFA 91 (108)
T ss_dssp EEEECSSCTT---CCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHHHTTCEET
T ss_pred EEEEECCCCC---CCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 4568887543 245678899999999877766 56666777888888877653 433333
No 108
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.39 E-value=1e+02 Score=19.09 Aligned_cols=51 Identities=18% Similarity=0.203 Sum_probs=32.8
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCC
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHD 100 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~ 100 (366)
++||+..- -..+.+.+.-.+||+|..+.+. |.-+|-..+++.++..+...+
T Consensus 4 ~v~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 63 (77)
T 1uaw_A 4 FIGGLSWQ---TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 63 (77)
T ss_dssp EEESCCSS---CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTT
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCC
Confidence 56776533 2356688888999987776652 223444577888877776443
No 109
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=28.22 E-value=1.6e+02 Score=20.94 Aligned_cols=63 Identities=21% Similarity=0.310 Sum_probs=39.5
Q ss_pred CCcceeeccccCCC-CchHHHHHHHHhcCCeeEEecC------CeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 44 RLPLIGNLHQLVAS-LPHHSLRDLTQKHGPLMHLKLG------EVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 44 ~~P~lG~~~~~~~~-~~~~~~~~~~~kyG~i~~~~~~------~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
.--++||+..-... +.-+.+.++-.+||+|..+.+. |.-+|...+.+.+...+.. ++..+.++
T Consensus 30 ~~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr 100 (127)
T 2a3j_A 30 QVVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGN 100 (127)
T ss_dssp SEEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTS
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCC
Confidence 35788998644211 1122356788899999888763 4566777888888777643 33334443
No 110
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=27.98 E-value=1.4e+02 Score=20.05 Aligned_cols=52 Identities=15% Similarity=0.199 Sum_probs=36.4
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--------CeeEEEeCCHHHHHHHHhh
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~vvv~~~~~v~~il~~ 98 (366)
..-++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 30 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 30 GKLLVSNLDFG---VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 36778887544 2456788888999998777653 2345556888888877763
No 111
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=27.79 E-value=1.6e+02 Score=20.84 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=42.2
Q ss_pred CCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 41 GPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 41 gp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
.|...-++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+.. +...+.+
T Consensus 44 ~~~~~l~V~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~lng~~i~g 115 (129)
T 2kxn_B 44 DPNCCLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDG 115 (129)
T ss_dssp CCSSCBCEETCTTS---CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHHHTTCCSSS
T ss_pred CCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 44456788887644 2456788899999998888763 2345667889988887763 4333443
No 112
>4h6h_A Fibrinogen-binding protein; complement system, innate immunity, staphylococcus aureus ST biology, immune system; 2.50A {Staphylococcus aureus subsp} PDB: 4h6i_A
Probab=27.56 E-value=1.1e+02 Score=20.04 Aligned_cols=39 Identities=10% Similarity=0.139 Sum_probs=24.1
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVF 204 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~ 204 (366)
+++.++.-.-+..-+.-+--++.-....++++.||++++
T Consensus 47 ~Imm~~y~AK~Alksknf~kMa~AK~~LE~IY~eIde~i 85 (87)
T 4h6h_A 47 TIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEII 85 (87)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444445556666677888999998875
No 113
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=27.25 E-value=1.4e+02 Score=19.93 Aligned_cols=50 Identities=20% Similarity=0.203 Sum_probs=35.2
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC-----C----eeEEEeCCHHHHHHHHhh
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-----E----VSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-----~----~~~vvv~~~~~v~~il~~ 98 (366)
-|+||+..- -..+.+.++-.+||+|..+.+. | .-+|-..+++.++..+..
T Consensus 22 lfV~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN---MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 578888644 2457788899999998887652 1 234566888888777653
No 114
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.20 E-value=1.5e+02 Score=20.27 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=41.6
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCC---------eeEEEeCCHHHHHHHHhhCCcccCC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGE---------VSTIVVSSQEIAKEVLKTHDLVFAQ 105 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~vvv~~~~~v~~il~~~~~~~~~ 105 (366)
..--++||+..- -..+.+.++-.+||+|..+.+.. .-+|-..+.+.++..+......+..
T Consensus 17 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 85 (116)
T 2cqd_A 17 FTKIFVGGLPYH---TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDG 85 (116)
T ss_dssp SSEEEEECCCSS---CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETT
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCCcCCC
Confidence 345778887644 24567888899999998887743 3456678999998888654333333
No 115
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=27.18 E-value=1.4e+02 Score=19.79 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=37.8
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEec----CCeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKL----GEVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~----~~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
++||+..- -..+.+.++-.+||+|..+.+ -|.-+|-..+++.++..+.. +...+.++
T Consensus 4 ~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 65 (101)
T 2hvz_A 4 YVGNLGTG---AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGS 65 (101)
T ss_dssp EEECCCSS---CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSC
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCc
Confidence 56776533 245678899999999888776 24555667888888877653 33334443
No 116
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=27.14 E-value=1.5e+02 Score=20.07 Aligned_cols=50 Identities=8% Similarity=0.185 Sum_probs=37.4
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
.-++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 28 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 28 ILFVTSIHEE---AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEEESCCTT---CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 4678887643 2456788999999999888874 345666788888887775
No 117
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.87 E-value=1.3e+02 Score=19.52 Aligned_cols=63 Identities=24% Similarity=0.309 Sum_probs=42.0
Q ss_pred CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh-CCcccCCCC
Q 044178 42 PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT-HDLVFAQRP 107 (366)
Q Consensus 42 p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~-~~~~~~~~~ 107 (366)
|..--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.. +...+.++.
T Consensus 4 ~~~~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 76 (95)
T 2dnz_A 4 GSSGLYVGSLHFN---ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRP 76 (95)
T ss_dssp CCCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSSC
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCcE
Confidence 3345678887543 2456788999999998887763 2445667889988887763 444444443
No 118
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=26.80 E-value=1.2e+02 Score=19.03 Aligned_cols=49 Identities=14% Similarity=0.252 Sum_probs=33.8
Q ss_pred ceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh
Q 044178 47 LIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 47 ~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~ 98 (366)
++||+..- -..+.+.+.-.+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 5 ~V~nlp~~---~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNVN---VDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCTT---CCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 46776433 2356788888999998877652 2345667888888887763
No 119
>2qff_A Hypothetical protein; complement, inhibitor, inflammation, bacterial, molecular BI hydrolase inhibitor; HET: MSE; 1.80A {Staphylococcus aureus subsp} PDB: 3l5n_M* 3l3o_M* 3nms_M* 3nsa_M* 3ohx_M*
Probab=26.59 E-value=1.1e+02 Score=19.76 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=23.2
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVF 204 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~ 204 (366)
+++.++.-.-+..-+--+..++.-..-.++++.||++++
T Consensus 43 ~Imm~~y~AK~Alkskn~~kM~~AK~~LE~IY~eIde~~ 81 (82)
T 2qff_A 43 TIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEAL 81 (82)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444444444444445555555667788899988764
No 120
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.42 E-value=99 Score=21.13 Aligned_cols=50 Identities=10% Similarity=0.157 Sum_probs=35.7
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~ 97 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 31 ~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 31 RLHVSNIPFR---FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp EEEEESCCTT---CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred EEEEECCCCc---CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 5678887543 2456788899999998887763 445566678888777665
No 121
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=26.39 E-value=1.6e+02 Score=20.31 Aligned_cols=60 Identities=22% Similarity=0.265 Sum_probs=41.1
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--------CeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--------EVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
.--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.. +...+.++
T Consensus 8 ~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 76 (116)
T 2fy1_A 8 GKLFIGGLNRE---TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 (116)
T ss_dssp CEEEEECCTTT---CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSS
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 34578887543 2467788999999998887763 3456667889988887753 44444444
No 122
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.34 E-value=1.4e+02 Score=19.62 Aligned_cols=52 Identities=19% Similarity=0.156 Sum_probs=37.9
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
..--++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 8 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 68 (99)
T 1whw_A 8 SGRLFVRNLSYT---SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYA 68 (99)
T ss_dssp CEEEEEECCCTT---CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 345678887544 2456788899999999888873 345566788998888774
No 123
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.11 E-value=1.4e+02 Score=19.40 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=40.8
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC-CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
..--++||+..- -..+.+.++..+||+|..+.+. +.-+|-..+.+.++..+.. +...+.+
T Consensus 10 ~~~l~V~nLp~~---~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g 71 (92)
T 2dgt_A 10 STKLHVGNISPT---CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQG 71 (92)
T ss_dssp SEEEEEESCCSS---CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHHHTTEEETT
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHHhCCCeeCC
Confidence 345678888544 2467789999999998888764 3445556888888777653 4433433
No 124
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.78 E-value=1.4e+02 Score=19.38 Aligned_cols=56 Identities=20% Similarity=0.236 Sum_probs=39.2
Q ss_pred CCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhh
Q 044178 40 PGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 40 pgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~ 98 (366)
|.|...-++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 12 ~~~~~~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 12 PDPNCCLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CCGGGCEEEESCCSS---CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCC---CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 445557788988644 2456788999999998887762 1234556888888887763
No 125
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.67 E-value=1.6e+02 Score=20.03 Aligned_cols=56 Identities=14% Similarity=0.091 Sum_probs=40.5
Q ss_pred CCCCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHh
Q 044178 40 PGPWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 40 pgp~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~ 97 (366)
+.|...-++||+..- .-..+.++++-.+||.|..+++. +.-+|-..+.+.+...+.
T Consensus 12 ~~p~~~l~V~nLp~~--~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 12 VETRRVVHIMDFQRG--KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCCEEEEESCCCS--SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCC--cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 345567889998641 22456788999999999998875 345677788888877665
No 126
>2win_M Staphylococcal complement inhibitor; serine protease, immune response, innate immunity, zymogen, secreted, protease, glycation; HET: NDG NAG MAN BMA; 3.90A {Staphylococcus aureus}
Probab=24.84 E-value=1.1e+02 Score=20.09 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=24.7
Q ss_pred hhhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHhc
Q 044178 166 DIFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVFK 205 (366)
Q Consensus 166 ~~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~~ 205 (366)
+++.++.-.-+..-+--+.-++.-..-.++++.||++.+.
T Consensus 50 ~Imm~~y~AK~Alksknf~kM~~AK~~LEnIY~eIde~i~ 89 (92)
T 2win_M 50 TIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEALK 89 (92)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444444455566666678899999988764
No 127
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=24.82 E-value=1.6e+02 Score=20.69 Aligned_cols=67 Identities=10% Similarity=0.052 Sum_probs=42.1
Q ss_pred CCCCcceeeccccC--CCCchHHHHHHHHhcCCeeEEecC-------------CeeEEEeCCHHHHHHHHh-hCCcccCC
Q 044178 42 PWRLPLIGNLHQLV--ASLPHHSLRDLTQKHGPLMHLKLG-------------EVSTIVVSSQEIAKEVLK-THDLVFAQ 105 (366)
Q Consensus 42 p~~~P~lG~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~~-------------~~~~vvv~~~~~v~~il~-~~~~~~~~ 105 (366)
|...-+|.|++.-. ..+..+.+++...+||+|..+++. |.-+|-..+++.++..+. -++..|.+
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 44566778876542 235667788888899998887653 223344578877655443 35666666
Q ss_pred CCc
Q 044178 106 RPL 108 (366)
Q Consensus 106 ~~~ 108 (366)
|..
T Consensus 99 R~i 101 (118)
T 3ue2_A 99 RKV 101 (118)
T ss_dssp EEC
T ss_pred cEE
Confidence 543
No 128
>3t49_A SCIN-B, fibrinogen-binding protein; secreted, virulence, immune system; HET: GOL; 1.45A {Staphylococcus aureus subsp} PDB: 3t4a_G
Probab=24.64 E-value=86 Score=19.60 Aligned_cols=38 Identities=11% Similarity=0.142 Sum_probs=21.8
Q ss_pred hhhccccchHHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Q 044178 167 IFVAGSDTSSTSVEWAMAEMLKNPRILKEAQAEVRRVF 204 (366)
Q Consensus 167 ~~~ag~~tt~~~l~~~l~~l~~~p~~~~kl~~Ei~~~~ 204 (366)
++.++.-.-+..-+.-+-.++.-....++++.||++++
T Consensus 34 Imm~~y~AK~Alksknf~kMa~AK~~LE~IY~eI~e~i 71 (73)
T 3t49_A 34 IMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEII 71 (73)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334444455555667788899988764
No 129
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=24.17 E-value=1.5e+02 Score=19.29 Aligned_cols=52 Identities=13% Similarity=0.324 Sum_probs=37.2
Q ss_pred CCcceeeccccCCCCchHHHH----HHHHhcCCeeEEecC------CeeEEEeCCHHHHHHHHhh
Q 044178 44 RLPLIGNLHQLVASLPHHSLR----DLTQKHGPLMHLKLG------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~----~~~~kyG~i~~~~~~------~~~~vvv~~~~~v~~il~~ 98 (366)
.--++||+..-. ..+.+. +...+||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 9 ~~l~V~nLp~~~---~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 9 HTIYINNLNEKI---KKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp SEEEEESCCTTS---CHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCCC---CHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 456788876442 233444 888999999888775 5667778899988877753
No 130
>3arc_T Photosystem II reaction center protein T; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_T* 2axt_T* 3bz1_T* 3bz2_T* 3kzi_T* 3prq_T* 3prr_T* 3a0b_T* 3a0h_T*
Probab=24.15 E-value=55 Score=17.15 Aligned_cols=22 Identities=32% Similarity=0.469 Sum_probs=9.4
Q ss_pred CCcchhHHHHHHHHHHHHHHHH
Q 044178 1 MELQFPSFILISSLLLFLFKVA 22 (366)
Q Consensus 1 m~~~~~~~~~~~~~~l~~~~~~ 22 (366)
|+-..-.+++++++.++.++++
T Consensus 1 MEa~vYt~ll~~tlgiiFFAI~ 22 (32)
T 3arc_T 1 METITYVFIFACIIALFFFAIF 22 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHhhh
Confidence 3333334444444444444433
No 131
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=24.06 E-value=1.9e+02 Score=21.41 Aligned_cols=50 Identities=18% Similarity=0.341 Sum_probs=35.4
Q ss_pred cceeeccccCCCCchHHHHHHHHhcC--CeeEEecC---------CeeEEEeCCHHHHHHHHhh
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHG--PLMHLKLG---------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG--~i~~~~~~---------~~~~vvv~~~~~v~~il~~ 98 (366)
-|+||+..- -..+.+.++-.+|| +|..+.+. |.-+|...+.+.++..+..
T Consensus 58 lfVgnLp~~---~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 58 VYVGSFSWW---TTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEEECCCTT---CCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 467776433 24567889999999 88887762 2346667899998888765
No 132
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.96 E-value=1.6e+02 Score=19.49 Aligned_cols=50 Identities=20% Similarity=0.319 Sum_probs=35.1
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 10 ~l~V~nlp~~---~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 68 (104)
T 1p1t_A 10 SVFVGNIPYE---ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 68 (104)
T ss_dssp CEEEESCCTT---SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCc---CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 4567887533 2456788888999998777653 233455688888888775
No 133
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=23.74 E-value=2e+02 Score=20.91 Aligned_cols=59 Identities=12% Similarity=0.223 Sum_probs=39.9
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecCC---------eeEEEeCCHHHHHHHHhhCCcccCCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGE---------VSTIVVSSQEIAKEVLKTHDLVFAQR 106 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~vvv~~~~~v~~il~~~~~~~~~~ 106 (366)
--++||+..- -..+.+.+.-.+||+|..+.+.. .-+|-..+.+.+...+..+...+.++
T Consensus 89 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 156 (167)
T 2cjk_A 89 KIFVGGIGPD---VRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDR 156 (167)
T ss_dssp EEEEEEECTT---CCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSEECSSSS
T ss_pred eEEECCCCCC---CCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCCEEeCCe
Confidence 4567777543 24567888889999988887642 34566788999988887444444443
No 134
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.54 E-value=82 Score=21.63 Aligned_cols=61 Identities=15% Similarity=0.196 Sum_probs=40.0
Q ss_pred CCCcceeeccccCCCCchHHHH---HHHHhcCCeeEEecC------------CeeEEEeCCHHHHHHHHhh-CCcccCCC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLR---DLTQKHGPLMHLKLG------------EVSTIVVSSQEIAKEVLKT-HDLVFAQR 106 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~---~~~~kyG~i~~~~~~------------~~~~vvv~~~~~v~~il~~-~~~~~~~~ 106 (366)
...-++||+..-. ..+.+. ++-.+||+|..+.+. |.-+|-..+.+.++..+.. +...+.++
T Consensus 15 ~~~l~V~nLp~~~---~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~gr 91 (111)
T 2cpi_A 15 KNLVFVVGLSQRL---ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 91 (111)
T ss_dssp SSCEEEEEECTTT---CCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred CCEEEEECCCCCC---CHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECCE
Confidence 3466889986542 234566 777899998887763 2445666888888877764 54445444
No 135
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.48 E-value=1.8e+02 Score=19.85 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=40.9
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHhh-CCcccCCCC
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLKT-HDLVFAQRP 107 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~~-~~~~~~~~~ 107 (366)
.-++||+..- -..+.+.++-.+||+|..+.+. +.-+|...+.+.++..+.. +...+.++.
T Consensus 12 ~l~V~nLp~~---~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 12 VILAKNLPAG---TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 4567887533 2467789999999999888863 4456667888888776643 444455544
No 136
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.43 E-value=1.7e+02 Score=19.46 Aligned_cols=56 Identities=16% Similarity=0.094 Sum_probs=39.4
Q ss_pred CCCCCCcceeeccccCCCCchHHHHHHHHh-cCCeeEEecC--------CeeEEEeCCHHHHHHHHhh
Q 044178 40 PGPWRLPLIGNLHQLVASLPHHSLRDLTQK-HGPLMHLKLG--------EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 40 pgp~~~P~lG~~~~~~~~~~~~~~~~~~~k-yG~i~~~~~~--------~~~~vvv~~~~~v~~il~~ 98 (366)
+.|..--++||+..- -..+.+.++..+ ||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 6 ~~~~~~l~V~nLp~~---~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 6 SGPEYSLFVGDLTPD---VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SSCCCCEEEECCCTT---CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC---CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 345556789998644 245678888888 9998887762 2345666899988887763
No 137
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.28 E-value=1.6e+02 Score=19.30 Aligned_cols=62 Identities=11% Similarity=0.144 Sum_probs=43.1
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccCCCC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFAQRP 107 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~~~~ 107 (366)
..--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+..+...+.++.
T Consensus 10 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~ 80 (99)
T 2dgs_A 10 SNKIFVGGIPHN---CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 80 (99)
T ss_dssp CCEEEEESCCSS---CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSCB
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCeE
Confidence 345678887544 2456788999999999888763 3345667899998888765555555443
No 138
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=22.84 E-value=1.9e+02 Score=19.95 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=41.5
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcC-CeeEEecC-----CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHG-PLMHLKLG-----EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~~-----~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
.--++||+..- -..+.++++-.+|| .|..+.+. |.-+|-..+.+.++..+.. +...+.+
T Consensus 29 ~~l~VgnLp~~---~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l~G 94 (111)
T 2jvr_A 29 YRITMKNLPEG---CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRG 94 (111)
T ss_dssp EEEEEECSSCC---CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEETT
T ss_pred CEEEEECCCCC---CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 35678987643 24677899999999 78877773 5667778899988877753 3333443
No 139
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=22.66 E-value=1.6e+02 Score=22.85 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=37.4
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC--------CeeEEEeCCHHHHHHHHhhCC
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--------EVSTIVVSSQEIAKEVLKTHD 100 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--------~~~~vvv~~~~~v~~il~~~~ 100 (366)
-++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++..+....
T Consensus 112 l~V~nLp~~---~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~~ 171 (193)
T 2voo_A 112 VYIKGFPTD---ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPG 171 (193)
T ss_dssp EEEECCCTT---CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCTT
T ss_pred EEecCCCCc---CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhCC
Confidence 478887533 3567899999999998877653 344566688999888876443
No 140
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.47 E-value=1.8e+02 Score=19.33 Aligned_cols=52 Identities=19% Similarity=0.146 Sum_probs=37.8
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC-------CeeEEEeCCHHHHHHHHh
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-------~~~~vvv~~~~~v~~il~ 97 (366)
..--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 15 ~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 15 PRTLYVGNLSRD---VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp CCEEEEESCCTT---CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCcc---CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 346778887644 2466788999999998887763 345566788888877765
No 141
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=22.21 E-value=1.8e+02 Score=19.88 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=36.5
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEEecCC---------eeEEEeCCHHHHHHHHhh
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLGE---------VSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~---------~~~vvv~~~~~v~~il~~ 98 (366)
.--++||+..- -..+.+.++..+||+|..+.+.. .-+|-..+.+.++..+..
T Consensus 26 ~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 26 ANLFIYHLPQE---FGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp CCEEEESCCSS---CCHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred cEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 35678888644 24577889999999987776521 235556888888877743
No 142
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=21.91 E-value=1.9e+02 Score=21.84 Aligned_cols=59 Identities=17% Similarity=0.162 Sum_probs=41.1
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHhhCCcccC
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLKTHDLVFA 104 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~~~~~~~~ 104 (366)
..--++||+..- -..+.+.++-.+||+|..+.+. |.-+|...+.+.++..+..+...+.
T Consensus 13 ~~~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~~ 80 (196)
T 1l3k_A 13 LRKLFIGGLSFE---TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD 80 (196)
T ss_dssp GGEEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEET
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEEC
Confidence 346688988644 2467788999999998777652 2345667899999888875443333
No 143
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=21.68 E-value=1.9e+02 Score=19.47 Aligned_cols=51 Identities=10% Similarity=0.094 Sum_probs=38.9
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC--CeeEEEeCCHHHHHHHHhh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG--EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~--~~~~vvv~~~~~v~~il~~ 98 (366)
--++||+..- -..+.+.++..+||+|..+.+. +.-+|...+.+.++..+..
T Consensus 17 ~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPPS---GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCSS---CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 4678887643 2467789999999998887763 6677778899988887763
No 144
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=21.57 E-value=2e+02 Score=19.57 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCeeEEecC-----------CeeEEEeCCHHHHHHHH-hhCCcccCCCC
Q 044178 61 HSLRDLTQKHGPLMHLKLG-----------EVSTIVVSSQEIAKEVL-KTHDLVFAQRP 107 (366)
Q Consensus 61 ~~~~~~~~kyG~i~~~~~~-----------~~~~vvv~~~~~v~~il-~~~~~~~~~~~ 107 (366)
+.+++...+||+|..+.+. |.-+|-..+++.++..+ .-++..|.+|.
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR~ 88 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRV 88 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCCE
Confidence 4567777799999998874 33356667888776654 33555566554
No 145
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=21.27 E-value=2e+02 Score=19.63 Aligned_cols=52 Identities=19% Similarity=0.282 Sum_probs=37.4
Q ss_pred CCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 43 WRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 43 ~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
..--++||+..- -..+.+.++-.+||+|..+.+. |.-+|...+.+.++..+.
T Consensus 6 ~~~lfV~nL~~~---~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~ 66 (110)
T 3s8s_A 6 LKEVTFARLNDN---VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVK 66 (110)
T ss_dssp CCEEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHH
T ss_pred CcEEEEECCCCC---CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHH
Confidence 345678887543 2467788999999998888762 233566788999887765
No 146
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.18 E-value=1.3e+02 Score=19.37 Aligned_cols=48 Identities=15% Similarity=0.293 Sum_probs=35.0
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC----CeeEEEeCCHHHHHHH
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG----EVSTIVVSSQEIAKEV 95 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----~~~~vvv~~~~~v~~i 95 (366)
--++||+..- -..+.+.++-.+||+|..+.+. |.-+|-..+.+.++.+
T Consensus 7 ~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 7 GVFVGRCTGD---MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEEESCCSS---SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEEeCCCCC---CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 4567887543 2456788888999999888874 4556777888888754
No 147
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.15 E-value=2.1e+02 Score=19.68 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=39.0
Q ss_pred CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHh
Q 044178 42 PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 42 p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~ 97 (366)
|..--++||+..- -..+.++++-.+||.|..+.+. |.-+|-..+.+.++..+.
T Consensus 15 ~~~~LfV~nLp~~---vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPID---VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCTT---SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 4456788997643 2456789999999998888763 456677788888877665
No 148
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.11 E-value=2e+02 Score=19.39 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=37.1
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~ 97 (366)
--++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.+...+.
T Consensus 27 ~l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~ 79 (109)
T 1x4g_A 27 TVYCGGIASG---LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIV 79 (109)
T ss_dssp EEEEECCSSC---CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 5678887644 2456788888999998888763 556677788888877764
No 149
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=21.04 E-value=2.7e+02 Score=21.01 Aligned_cols=50 Identities=12% Similarity=0.103 Sum_probs=35.2
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC-----CeeEEEeCCHHHHHHHHhh
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG-----EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~-----~~~~vvv~~~~~v~~il~~ 98 (366)
-++||+..- -..+.+.++-.+||.|-++++. +.-+|-..|.+.++..+..
T Consensus 49 l~VgNL~~~---vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 49 IIVENLFYP---VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EEECSCCSC---CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCcCCC---CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 457887432 2456789999999998888773 2456667888887766553
No 150
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.92 E-value=1.9e+02 Score=19.00 Aligned_cols=52 Identities=12% Similarity=0.139 Sum_probs=37.7
Q ss_pred CCCCcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHhh
Q 044178 42 PWRLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLKT 98 (366)
Q Consensus 42 p~~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~~ 98 (366)
+..--++||+ .. ..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 14 ~~~~l~V~n~-~~----t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 14 KGNTLYVYGE-DM----TPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp CCSEEEEECS-SC----CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEcCC-CC----CHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3345678883 33 467789999999999888774 4556667888888887753
No 151
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.73 E-value=1.8e+02 Score=18.89 Aligned_cols=51 Identities=20% Similarity=0.229 Sum_probs=35.8
Q ss_pred CCcceeeccccCCCCchHHHHHHHHhcCCeeEE-ecC---------CeeEEEeCCHHHHHHHHh
Q 044178 44 RLPLIGNLHQLVASLPHHSLRDLTQKHGPLMHL-KLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 44 ~~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~-~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
.--++||+..- -..+.+.++..+||+|..+ ++. |.-+|-..+++.++..+.
T Consensus 6 ~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 66 (96)
T 1x5t_A 6 SGIFIGNLDPE---IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 66 (96)
T ss_dssp CEEEEECCCTT---CCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHH
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 34578887544 2467788999999987655 442 344566788999988876
No 152
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=20.71 E-value=2.9e+02 Score=21.15 Aligned_cols=49 Identities=16% Similarity=0.288 Sum_probs=36.6
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
-++||+..- -..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 31 l~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 88 (216)
T 2qfj_A 31 VYVGSIYYE---LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALE 88 (216)
T ss_dssp EEEECCCTT---CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHH
Confidence 567887544 2456788999999999888773 345667789999888876
No 153
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=20.66 E-value=2.6e+02 Score=20.71 Aligned_cols=50 Identities=8% Similarity=0.185 Sum_probs=36.4
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---------CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---------EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---------~~~~vvv~~~~~v~~il~ 97 (366)
.-||||+..- -....+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 74 ~l~V~nLp~~---~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 132 (165)
T 1rk8_A 74 ILFVTSIHEE---AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 132 (165)
T ss_dssp EEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHH
Confidence 4778887644 2467788999999998887763 344566688888877765
No 154
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=20.46 E-value=1.9e+02 Score=19.05 Aligned_cols=50 Identities=16% Similarity=0.299 Sum_probs=37.4
Q ss_pred Ccceeeccc-cCCCCchHHHHHHHHhcCCeeEEec-CCeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQ-LVASLPHHSLRDLTQKHGPLMHLKL-GEVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~-~~~~~~~~~~~~~~~kyG~i~~~~~-~~~~~vvv~~~~~v~~il~ 97 (366)
--++||+.. - -..+.+.++-.+||+|..+.+ -|.-+|-..+.+.++..+.
T Consensus 24 ~l~V~nLp~~~---~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~ 75 (97)
T 2xnq_A 24 RLFIGNLPLKN---VSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIE 75 (97)
T ss_dssp EEEEESCCSSC---CCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCccc---CCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHH
Confidence 567888864 3 245678899999999988877 3555666788888887775
No 155
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=20.33 E-value=1.7e+02 Score=18.48 Aligned_cols=57 Identities=12% Similarity=0.182 Sum_probs=38.2
Q ss_pred cceeeccccCCCCchHHHHHHHHhcCCeeEEecC----------CeeEEEeCCHHHHHHHHhh-CCcccCC
Q 044178 46 PLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG----------EVSTIVVSSQEIAKEVLKT-HDLVFAQ 105 (366)
Q Consensus 46 P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~----------~~~~vvv~~~~~v~~il~~-~~~~~~~ 105 (366)
-++||+..- -..+.+.+.-.+||+|..+.+. |.-+|-..+++.++..+.. ++..+.+
T Consensus 7 l~V~nlp~~---~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 74 (88)
T 4a8x_A 7 VHIGRLTRN---VTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 74 (88)
T ss_dssp EEEECCCTT---CCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHHcCCCeECC
Confidence 467777543 2456788888999998887762 3445667889998887763 4433433
No 156
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=20.09 E-value=2e+02 Score=18.98 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=35.6
Q ss_pred CcceeeccccCCCCchHHHHHHHHhcCCeeEEecC---CeeEEEeCCHHHHHHHHh
Q 044178 45 LPLIGNLHQLVASLPHHSLRDLTQKHGPLMHLKLG---EVSTIVVSSQEIAKEVLK 97 (366)
Q Consensus 45 ~P~lG~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~---~~~~vvv~~~~~v~~il~ 97 (366)
--++||+..- -..+.+.++..+||.|..+.+. |.-+|...+.+.+...+.
T Consensus 29 ~l~V~nlp~~---~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~ 81 (101)
T 2la4_A 29 TAYIGNIPHF---ATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIV 81 (101)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred EEEEcCCCcc---cCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 4578887543 2457788899999998887763 455566678888777664
Done!