Query 044191
Match_columns 87
No_of_seqs 104 out of 196
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 21:31:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044191.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044191hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1cvja1 d.58.7.1 (A:11-90) Pol 61.6 1.4 9.8E-05 24.1 1.1 33 10-54 46-78 (80)
2 d1wg1a_ d.58.7.1 (A:) Probable 61.1 2.2 0.00016 23.8 2.0 36 10-57 44-79 (88)
3 d1fjca_ d.58.7.1 (A:) Nucleoli 50.4 8 0.00058 21.4 3.3 34 9-54 56-89 (96)
4 d1x4ha1 d.58.7.1 (A:8-105) RNA 47.6 7.4 0.00054 21.3 2.8 39 9-53 53-91 (98)
5 d2cqia1 d.58.7.1 (A:1-90) Nucl 44.4 6.3 0.00046 21.6 2.1 33 10-54 52-84 (90)
6 d1cvja2 d.58.7.1 (A:91-179) Po 44.4 10 0.00076 20.6 3.1 32 11-54 53-84 (89)
7 d1wi6a1 d.58.7.1 (A:69-143) Ri 40.6 6.6 0.00048 21.0 1.7 36 10-57 37-72 (75)
8 d2adca2 d.58.7.1 (A:444-531) P 39.7 15 0.0011 19.8 3.2 17 11-27 53-69 (88)
9 d1nm8a2 c.43.1.3 (A:386-599) C 37.5 46 0.0034 21.4 6.0 45 32-76 163-213 (214)
10 d1u6fa1 d.58.7.1 (A:1-139) RNA 36.9 12 0.0009 21.8 2.7 33 10-54 88-120 (139)
11 d1t1ua2 c.43.1.3 (A:402-616) C 36.4 27 0.002 22.6 4.7 45 31-75 163-213 (215)
12 d1x4ea1 d.58.7.1 (A:8-79) RNA- 34.8 8.9 0.00065 19.9 1.6 17 10-26 44-60 (72)
13 d1yema_ d.63.1.2 (A:) Hypothet 32.3 31 0.0023 20.6 4.2 63 8-70 72-146 (163)
14 d1x5ta1 d.58.7.1 (A:8-90) Spli 32.0 12 0.00091 19.8 2.0 32 10-53 45-76 (83)
15 d2cqpa1 d.58.7.1 (A:917-1002) 31.9 12 0.00085 20.0 1.8 19 9-27 54-72 (86)
16 d2disa1 d.58.7.1 (A:8-103) Hyp 30.9 11 0.00079 20.7 1.6 20 10-29 49-68 (96)
17 d1x4aa1 d.58.7.1 (A:9-103) Spl 30.8 11 0.0008 20.7 1.6 18 10-27 57-74 (95)
18 d2adba1 d.58.7.1 (A:177-284) P 30.6 11 0.0008 21.2 1.6 18 10-27 49-66 (108)
19 d2b0ga1 d.58.7.1 (A:1-83) Spli 30.3 11 0.00082 20.1 1.6 18 10-27 49-66 (83)
20 d1b7fa1 d.58.7.1 (A:123-204) S 29.4 12 0.00087 19.8 1.6 18 10-27 48-65 (82)
21 d2cpha1 d.58.7.1 (A:454-547) P 28.5 28 0.0021 18.9 3.2 37 10-57 55-91 (94)
22 d2cpja1 d.58.7.1 (A:65-150) No 28.1 15 0.0011 19.9 1.9 18 10-27 48-65 (86)
23 d1zcaa1 a.66.1.1 (A:83-204) Tr 27.4 18 0.0013 21.1 2.3 31 56-86 5-36 (122)
24 d1xl7a2 c.43.1.3 (A:393-610) P 27.2 74 0.0054 20.4 7.2 46 31-76 165-216 (218)
25 d1rk8a_ d.58.7.1 (A:) RNA-bind 27.1 14 0.00099 20.0 1.6 18 10-27 53-70 (88)
26 d1x4fa1 d.58.7.1 (A:8-106) Mat 26.6 34 0.0025 18.8 3.4 21 10-30 59-79 (99)
27 d2dita1 d.58.7.1 (A:8-106) HIV 26.2 19 0.0014 20.1 2.1 20 8-27 59-78 (99)
28 d2cqha1 d.58.7.1 (A:2-81) IGF- 25.8 29 0.0021 18.2 2.9 18 10-27 41-58 (80)
29 d1b7fa2 d.58.7.1 (A:205-289) S 25.5 15 0.0011 19.6 1.6 18 10-27 52-69 (85)
30 d1fxla1 d.58.7.1 (A:37-118) Hu 25.5 15 0.0011 19.2 1.6 18 10-27 48-65 (82)
31 d2cqca1 d.58.7.1 (A:109-191) A 25.0 16 0.0012 19.4 1.6 18 10-27 55-72 (83)
32 d2cq2a1 d.58.7.1 (A:25-125) Al 24.9 17 0.0013 20.4 1.8 18 10-27 60-77 (101)
33 d1no8a_ d.58.7.1 (A:) Nuclear 24.8 17 0.0012 19.2 1.6 18 10-27 45-62 (78)
34 d2cpza1 d.58.7.1 (A:383-484) C 24.8 18 0.0013 20.1 1.9 18 9-26 63-80 (102)
35 d1x4da1 d.58.7.1 (A:8-96) Matr 24.8 23 0.0017 19.3 2.3 35 10-54 49-83 (89)
36 d1wg4a_ d.58.7.1 (A:) Splicing 24.6 16 0.0012 20.3 1.6 17 10-26 54-70 (98)
37 d1azta1 a.66.1.1 (A:88-201) Tr 24.3 30 0.0022 20.2 2.9 23 64-86 9-31 (114)
38 d2cq0a1 d.58.7.1 (A:231-320) E 24.3 19 0.0014 19.5 1.8 18 10-27 54-71 (90)
39 d1x5sa1 d.58.7.1 (A:8-97) Cold 24.1 19 0.0014 19.2 1.9 18 10-27 51-68 (90)
40 d2cpia1 d.58.7.1 (A:101-189) E 24.0 17 0.0012 19.8 1.6 18 9-26 59-76 (89)
41 d1whya_ d.58.7.1 (A:) Putative 23.4 17 0.0013 19.9 1.6 23 10-33 57-79 (97)
42 d2cpfa1 d.58.7.1 (A:362-446) P 23.3 20 0.0015 18.9 1.8 18 10-27 47-64 (85)
43 d2ghpa1 d.58.7.1 (A:116-196) U 22.9 22 0.0016 18.6 1.9 17 10-26 47-63 (81)
44 d1whwa_ d.58.7.1 (A:) Probable 22.3 21 0.0015 19.5 1.8 34 10-55 54-87 (99)
45 d1cipa1 a.66.1.1 (A:61-181) Tr 22.1 43 0.0031 19.3 3.3 28 58-85 7-35 (121)
46 d3begb1 d.58.7.1 (B:121-207) S 21.6 20 0.0015 19.2 1.6 17 10-26 39-55 (87)
47 d1p5dx4 d.129.2.1 (X:368-463) 21.6 65 0.0048 17.8 5.8 66 7-72 7-86 (96)
48 d2cqba1 d.58.7.1 (A:1-89) Pept 21.3 22 0.0016 19.1 1.7 32 10-53 51-82 (89)
49 d2cpxa1 d.58.7.1 (A:291-392) R 21.3 27 0.0019 19.0 2.1 33 9-53 63-95 (102)
50 d2cpea1 d.58.7.1 (A:353-453) R 21.2 23 0.0017 19.1 1.8 19 9-27 61-79 (101)
51 d1fxla2 d.58.7.1 (A:119-203) H 21.1 21 0.0015 19.0 1.6 18 10-27 52-69 (85)
52 d1tada1 a.66.1.1 (A:57-177) Tr 20.7 49 0.0035 19.1 3.4 30 56-85 5-35 (121)
53 d1p1ta_ d.58.7.1 (A:) Cleavage 20.1 29 0.0021 19.0 2.1 34 10-55 54-87 (104)
54 d1x5ua1 d.58.7.1 (A:7-99) Spli 20.1 25 0.0018 19.1 1.8 18 10-27 55-72 (93)
No 1
>d1cvja1 d.58.7.1 (A:11-90) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.59 E-value=1.4 Score=24.13 Aligned_cols=33 Identities=6% Similarity=0.153 Sum_probs=23.7
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
-|.|.++++|+.|++.|.= ..+.|..|.|.|..
T Consensus 46 FV~f~~~~~a~~ai~~l~g------------~~~~gr~i~v~~a~ 78 (80)
T d1cvja1 46 YVNFQQPADAERALDTMNF------------DVIKGKPVRIMWSQ 78 (80)
T ss_dssp EEEESSHHHHHHHHTTSTT------------CEETTEECEEEECC
T ss_pred EEEECCHHHHHHHHHHcCC------------CEECCEEEEEEEeC
Confidence 3889999999999987741 22456667777654
No 2
>d1wg1a_ d.58.7.1 (A:) Probable RNA-binding protein KIAA1579 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.08 E-value=2.2 Score=23.78 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=27.7
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEeccC
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEAVEA 57 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a~d~ 57 (87)
-|-|.++++|+-|.+.|. ...++|..|.|+|.-.+.
T Consensus 44 fV~f~~~~~A~~Ai~~ln------------~~~~~G~~l~V~~a~~~~ 79 (88)
T d1wg1a_ 44 FVTLLNGEQAQNAIQMFH------------QYSFRGKDLIVQLQPTDA 79 (88)
T ss_dssp EECCSCHHHHHHHHHHHT------------TEEETTEEEEEEECCCCC
T ss_pred EEEECCHHHHHHHHHHhC------------CCEECCEEEEEEEcCCCC
Confidence 388999999999998883 134678888888875543
No 3
>d1fjca_ d.58.7.1 (A:) Nucleolin {Golden hamster (Mesocricetus auratus) [TaxId: 10036]}
Probab=50.39 E-value=8 Score=21.40 Aligned_cols=34 Identities=6% Similarity=0.101 Sum_probs=25.9
Q ss_pred EEEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 9 FEVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
--|.|.+.++|+-|++.|. ...+.|..|.|.|..
T Consensus 56 afV~f~~~~~A~~A~~~l~------------~~~~~gr~i~V~~a~ 89 (96)
T d1fjca_ 56 AYIEFKSEADAEKNLEEKQ------------GAEIDGRSVSLYYTG 89 (96)
T ss_dssp EEEEESSHHHHHHHHHHTT------------EEEETTEEEEEEECS
T ss_pred EEEEeCCHHHHHHHHHHcC------------CCEECCEEEEEEEeC
Confidence 3589999999999999883 234567778887754
No 4
>d1x4ha1 d.58.7.1 (A:8-105) RNA-binding protein 28 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=47.58 E-value=7.4 Score=21.26 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=27.4
Q ss_pred EEEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEE
Q 044191 9 FEVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFE 53 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~ 53 (87)
--|.|.+++.|+-|.+.+.-..... .+.++|..|.|.|+
T Consensus 53 afV~F~~~~~a~~ai~~l~~~~~~~------g~~~~gr~l~v~~a 91 (98)
T d1x4ha1 53 AFAQFMTQEAAQKCLAAASLEAEGG------GLKLDGRQLKVDLA 91 (98)
T ss_dssp EEEEESSHHHHHHHHHHHCTTTTTC------CEESSSCEEEEECC
T ss_pred EEEEEcCHHHHHHHHHHcccccccC------CcEECCEEEEEEEC
Confidence 3488999999999999875333322 23466777888774
No 5
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.43 E-value=6.3 Score=21.62 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=24.0
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
-|.|.+.++|+-|.+.+. ...+.|..|.|.|..
T Consensus 52 fV~f~~~~~A~~A~~~l~------------~~~~~g~~i~v~~a~ 84 (90)
T d2cqia1 52 FVEFYEHRDAAAALAAMN------------GRKILGKEVKVNWAT 84 (90)
T ss_dssp EEEESSHHHHHHHHHHHT------------TEEETTEEEEEEECC
T ss_pred EEEECCHHHHHHHHHHcC------------CCEECCEEEEEEEcC
Confidence 488999999999998874 113456677777753
No 6
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.35 E-value=10 Score=20.57 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=23.8
Q ss_pred EeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 11 VDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 11 VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
|-|.++++|+-|.+.|. ...+.|..|.|.+.-
T Consensus 53 V~f~~~~~A~~Ai~~l~------------g~~~~g~~i~V~~a~ 84 (89)
T d1cvja2 53 VHFETQEAAERAIEKMN------------GMLLNDRKVFVGRFK 84 (89)
T ss_dssp EEESCHHHHHHHTTSSS------------EEEETTEEEEEEECC
T ss_pred EEECCHHHHHHHHHHcC------------CCEECCEEEEEEECC
Confidence 78999999999987763 134567778877653
No 7
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.56 E-value=6.6 Score=20.97 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=25.6
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEeccC
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEAVEA 57 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a~d~ 57 (87)
-|-|.+.++|+-|.+.|. ..+ ++|..|.|+|...|+
T Consensus 37 fv~f~~~~~A~~Ai~~ln-~~~-----------~~g~~l~V~~a~~d~ 72 (75)
T d1wi6a1 37 FVTLLNGEQAEAAINTFH-QSR-----------LRERELSVQLQPTDA 72 (75)
T ss_dssp EEEESSHHHHHHHHHHHT-TEE-----------SSSCEEEEEECCSTT
T ss_pred EEEECCHHHHHHHHHHhC-Ccc-----------CCCCEEEEEEeCCCC
Confidence 478999999999999874 222 245667777765543
No 8
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.69 E-value=15 Score=19.75 Aligned_cols=17 Identities=24% Similarity=0.182 Sum_probs=15.3
Q ss_pred EeCCChhHHHHHHhhcc
Q 044191 11 VDYESNENASIVYAALA 27 (87)
Q Consensus 11 VpF~s~~~A~ia~~sL~ 27 (87)
|.|.+.++|.-|++.|.
T Consensus 53 V~f~~~~~A~~A~~~l~ 69 (88)
T d2adca2 53 IQMGSVEEAVQALIDLH 69 (88)
T ss_dssp EEESSHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHhcc
Confidence 78999999999998774
No 9
>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.45 E-value=46 Score=21.37 Aligned_cols=45 Identities=9% Similarity=0.024 Sum_probs=33.0
Q ss_pred cCccceEEEEEEECCEEEEEEEe------ccCchHHHHHHHHHHHHHHHHH
Q 044191 32 LQPDKVKRQISVIDGKLLVHFEA------VEARFPRALFSAFVDVLTLETK 76 (87)
Q Consensus 32 ~~p~~v~r~l~v~g~~L~v~~~a------~d~r~LRvsvnsfld~l~Lv~~ 76 (87)
..|+.....|.+.++.+.+.+++ ++...+.-++...++.++-+++
T Consensus 163 ~~~dGyGi~Y~i~~~~i~f~iss~~~~~~t~~~~f~~~L~~al~dm~~ll~ 213 (214)
T d1nm8a2 163 VVPDGYGVCYNPMEAHINFSLSAYNSCAETNAARLAHYLEKALLDMRALLQ 213 (214)
T ss_dssp SSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEecCCEEEEEEEecCCCcccCHHHHHHHHHHHHHHHHHHHh
Confidence 45778889999999999999987 4555666666666666665554
No 10
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=36.86 E-value=12 Score=21.82 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=24.5
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
-|-|.+.++|+.|.+.|. . ..+.|..|.|.|..
T Consensus 88 fV~f~~~~~A~~Ai~~ln-g-----------~~~~gr~l~V~~a~ 120 (139)
T d1u6fa1 88 FVKFQSGSSAQQAIAGLN-G-----------FNILNKRLKVALAA 120 (139)
T ss_dssp EEEESSHHHHHHHHHHTT-T-----------EECSSCEEEEEESS
T ss_pred eEEECCHHHHHHHHHHhC-C-----------CEECCEEEEEEEcC
Confidence 489999999999999873 1 23356777777753
No 11
>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.36 E-value=27 Score=22.62 Aligned_cols=45 Identities=4% Similarity=-0.133 Sum_probs=34.5
Q ss_pred ccCccceEEEEEEECCEEEEEEEe------ccCchHHHHHHHHHHHHHHHH
Q 044191 31 ELQPDKVKRQISVIDGKLLVHFEA------VEARFPRALFSAFVDVLTLET 75 (87)
Q Consensus 31 e~~p~~v~r~l~v~g~~L~v~~~a------~d~r~LRvsvnsfld~l~Lv~ 75 (87)
...|+.....|.+.++.+.+.+++ ++...++-++...++.++-++
T Consensus 163 p~~~dGyGi~Y~i~~d~i~f~iss~~s~~~t~~~~f~~~L~~al~~m~~ll 213 (215)
T d1t1ua2 163 PVVPNGYGACYNPQPEAITFCISSFHSCKETSSVEFAEAVGASLVDMRDLC 213 (215)
T ss_dssp CSSTTCEEEEEEECSSCEEEEEEEETTSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCceEEEEEecCCEEEEEEEeCCCCcccCHHHHHHHHHHHHHHHHHHH
Confidence 345778889999999999999988 456667777777777766554
No 12
>d1x4ea1 d.58.7.1 (A:8-79) RNA-binding motif, single-stranded-interacting protein 2, RBMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.81 E-value=8.9 Score=19.85 Aligned_cols=17 Identities=35% Similarity=0.387 Sum_probs=15.0
Q ss_pred EEeCCChhHHHHHHhhc
Q 044191 10 EVDYESNENASIVYAAL 26 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL 26 (87)
-|.|.++++|+-|.+.|
T Consensus 44 fV~f~~~~~A~~Ai~~l 60 (72)
T d1x4ea1 44 FVDFDSPSAAQKAVTAL 60 (72)
T ss_dssp EEEESCHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHh
Confidence 58999999999999875
No 13
>d1yema_ d.63.1.2 (A:) Hypothetical protein PF0863 {Pyrococcus furiosus [TaxId: 2261]}
Probab=32.27 E-value=31 Score=20.59 Aligned_cols=63 Identities=10% Similarity=0.051 Sum_probs=39.6
Q ss_pred EEEEeCCChhHHHHHHhhcccCcccCccceEEEEEEE------------CCEEEEEEEeccCchHHHHHHHHHHH
Q 044191 8 DFEVDYESNENASIVYAALAIDKELQPDKVKRQISVI------------DGKLLVHFEAVEARFPRALFSAFVDV 70 (87)
Q Consensus 8 ~L~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~------------g~~L~v~~~a~d~r~LRvsvnsfld~ 70 (87)
..+++..+++.+.-+..+|...+-..-.+.+..+... |..+.|.....+...++..+..++..
T Consensus 72 E~e~~v~~~~~~~~~l~~lg~~~~~~~~K~R~~y~~~~~~i~lD~v~~lg~f~EiE~~~~~~~~~~~~i~~l~~~ 146 (163)
T d1yema_ 72 EVEFEIGDFEKAVEVFKRLGFKIQATIKKKRWVYKLNGVTLEVNRVEGIGDFVDIEVISDSPEEAKEKIWEVAKM 146 (163)
T ss_dssp EEEEEESCHHHHHHHHHHTTCCEEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred EEEecccchHHHHHHHhhcCceEEEEEEEEEEEEEECCEEEEEEeeCCCCcEEEEEEEecChHHHHHHHHHHHHH
Confidence 5678888999999999998866655544445555432 34566666666654444444444433
No 14
>d1x5ta1 d.58.7.1 (A:8-90) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.98 E-value=12 Score=19.79 Aligned_cols=32 Identities=9% Similarity=0.251 Sum_probs=22.8
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEE
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFE 53 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~ 53 (87)
-|.|.++++|+-|.+.+. .. .+.|..|.|+|.
T Consensus 45 fV~f~~~~~a~~Ai~~~~-g~-----------~~~gr~l~v~~a 76 (83)
T d1x5ta1 45 FINFASFDASDAAIEAMN-GQ-----------YLCNRPITVSYA 76 (83)
T ss_dssp EEEBSSHHHHHHHHHTTT-TC-----------EETTEECEEEES
T ss_pred EEEECCHHHHHHHHHhCC-Cc-----------EECCEEEEEEEe
Confidence 489999999999998763 11 235666777664
No 15
>d2cqpa1 d.58.7.1 (A:917-1002) RNA-binding protein 12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.86 E-value=12 Score=20.05 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=16.2
Q ss_pred EEEeCCChhHHHHHHhhcc
Q 044191 9 FEVDYESNENASIVYAALA 27 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL~ 27 (87)
--|-|.++++|+.|.+.|.
T Consensus 54 afV~f~~~e~a~~Ai~~l~ 72 (86)
T d2cqpa1 54 AMVAFESRDEATAAVIDLN 72 (86)
T ss_dssp EEEEESCHHHHHHHHHHTT
T ss_pred EEEEEcCcHHHHHHHHHcC
Confidence 4589999999999998764
No 16
>d2disa1 d.58.7.1 (A:8-103) Hypothetical protein FLJ20273 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.90 E-value=11 Score=20.73 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=17.3
Q ss_pred EEeCCChhHHHHHHhhcccC
Q 044191 10 EVDYESNENASIVYAALAID 29 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD 29 (87)
-|-|.+.+.|..|.+.|.-.
T Consensus 49 FV~F~~~~~A~~Ai~~l~~~ 68 (96)
T d2disa1 49 FVEYESHRAAAMARRKLMPG 68 (96)
T ss_dssp EEEESSHHHHHHHHTTTTTC
T ss_pred EEEEcCHHHHHHHHHHHcCC
Confidence 48899999999999998643
No 17
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.76 E-value=11 Score=20.72 Aligned_cols=18 Identities=17% Similarity=0.126 Sum_probs=16.0
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|+++++|+.|.+.|.
T Consensus 57 fV~f~~~e~a~~Ai~~l~ 74 (95)
T d1x4aa1 57 FVEFEDPRDAEDAVYGRD 74 (95)
T ss_dssp EEEESCHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 489999999999998883
No 18
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.61 E-value=11 Score=21.24 Aligned_cols=18 Identities=17% Similarity=0.156 Sum_probs=16.2
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.+.+.|+-|++.|.
T Consensus 49 FV~f~~~e~A~~Ai~~ln 66 (108)
T d2adba1 49 LLQYADPVSAQHAKLSLD 66 (108)
T ss_dssp EEEESCHHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHC
Confidence 489999999999999885
No 19
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=30.26 E-value=11 Score=20.14 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=16.2
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.+.++|..|.+.|.
T Consensus 49 fV~f~~~~~A~~A~~~l~ 66 (83)
T d2b0ga1 49 FVEFTTELQSNAAKEALQ 66 (83)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred EEecCCHHHHHHHHHHhC
Confidence 488999999999999885
No 20
>d1b7fa1 d.58.7.1 (A:123-204) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=29.44 E-value=12 Score=19.77 Aligned_cols=18 Identities=22% Similarity=0.265 Sum_probs=16.1
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.++++|+-|.+.|.
T Consensus 48 fV~f~~~~~A~~ai~~ln 65 (82)
T d1b7fa1 48 FVDFTSEMDSQRAIKVLN 65 (82)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred eEEECCHHHHHHHHHHhC
Confidence 488999999999999876
No 21
>d2cpha1 d.58.7.1 (A:454-547) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.52 E-value=28 Score=18.90 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=25.2
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEeccC
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEAVEA 57 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a~d~ 57 (87)
-|.|.++++|+-|.+.|.--.+ +.|..|.|.|+-.+.
T Consensus 55 fV~f~~~~~A~~Ai~~l~~~~~-----------~~Gr~l~V~~A~~~~ 91 (94)
T d2cpha1 55 FVDFITKQDAKKAFNALCHSTH-----------LYGRRLVLEWADSEV 91 (94)
T ss_dssp EEEESSHHHHHHHHHHHHTCCB-----------SSSCBCEEEECCCCC
T ss_pred EEEECCHHHHHHHHHHccCCcE-----------ECCEEEEEEEcCCCC
Confidence 4889999999999998832222 235566666665543
No 22
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.14 E-value=15 Score=19.87 Aligned_cols=18 Identities=22% Similarity=0.180 Sum_probs=15.6
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.+.++|+-|++.|.
T Consensus 48 fV~f~~~~~A~~A~~~l~ 65 (86)
T d2cpja1 48 FIRLETRTLAEIAKVELD 65 (86)
T ss_dssp EEECSSSHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 378999999999999873
No 23
>d1zcaa1 a.66.1.1 (A:83-204) Transducin (alpha subunit), insertion domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.45 E-value=18 Score=21.10 Aligned_cols=31 Identities=6% Similarity=-0.039 Sum_probs=23.1
Q ss_pred cCchHHHHH-HHHHHHHHHHHHHHHhhCCCCC
Q 044191 56 EARFPRALF-SAFVDVLTLETKTIEQFGQGTE 86 (87)
Q Consensus 56 d~r~LRvsv-nsfld~l~Lv~~tm~~f~~~~~ 86 (87)
+.+..|..| ++.++.++.+++.|+.||.+.+
T Consensus 5 E~~~~r~~I~~Nii~~~~~Li~am~~l~i~~~ 36 (122)
T d1zcaa1 5 ALLEFRDTIFDNILKGSRVLVDARDKLGIPWQ 36 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCS
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 344455555 4599999999999999997653
No 24
>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.18 E-value=74 Score=20.41 Aligned_cols=46 Identities=7% Similarity=-0.010 Sum_probs=32.6
Q ss_pred ccCccceEEEEEEECCEEEEEEEe------ccCchHHHHHHHHHHHHHHHHH
Q 044191 31 ELQPDKVKRQISVIDGKLLVHFEA------VEARFPRALFSAFVDVLTLETK 76 (87)
Q Consensus 31 e~~p~~v~r~l~v~g~~L~v~~~a------~d~r~LRvsvnsfld~l~Lv~~ 76 (87)
...|+.....|.+.++.+.+.+++ +++..+.-++..-++.++-+++
T Consensus 165 P~~~dGyGi~Y~i~~d~i~~~vss~~s~~~t~~~~f~~~L~~al~dm~~ll~ 216 (218)
T d1xl7a2 165 PMVHNGYGFFYHIRDDRFVVACSSWRSCPETDAEKLVQMIFHAFHDMIQLMN 216 (218)
T ss_dssp CSSTTCEEEEEEEETTEEEEEEEEETTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeeEEEEEecCCEEEEEEEecCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence 345678899999999999999887 2444566666666655555544
No 25
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=27.15 E-value=14 Score=20.04 Aligned_cols=18 Identities=33% Similarity=0.425 Sum_probs=15.8
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.+.++|+-|.+.|.
T Consensus 53 fV~f~~~~~A~~A~~~ln 70 (88)
T d1rk8a_ 53 LVEYETHKQALAAKEALN 70 (88)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred eEEECCHHHHHHHHHHcC
Confidence 488999999999998874
No 26
>d1x4fa1 d.58.7.1 (A:8-106) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.58 E-value=34 Score=18.79 Aligned_cols=21 Identities=14% Similarity=0.126 Sum_probs=17.2
Q ss_pred EEeCCChhHHHHHHhhcccCc
Q 044191 10 EVDYESNENASIVYAALAIDK 30 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~ 30 (87)
-|-|.+.+.|+-|.+.+..++
T Consensus 59 fV~f~~~~~A~~Ai~~~~~~~ 79 (99)
T d1x4fa1 59 FIEMETREDAMAMVDHCLKKA 79 (99)
T ss_dssp EEECSSHHHHHHHHHHHHHSC
T ss_pred EEEecchHHHHHHHHHHhcCC
Confidence 478999999999998775554
No 27
>d2dita1 d.58.7.1 (A:8-106) HIV Tat-specific factor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.19 E-value=19 Score=20.08 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=17.4
Q ss_pred EEEEeCCChhHHHHHHhhcc
Q 044191 8 DFEVDYESNENASIVYAALA 27 (87)
Q Consensus 8 ~L~VpF~s~~~A~ia~~sL~ 27 (87)
..-|-|.+++.|+.|.+.|.
T Consensus 59 ~~fV~f~~~e~A~~A~~~ln 78 (99)
T d2dita1 59 VASVSFRDPEEADYCIQTLD 78 (99)
T ss_dssp EEEEECSCHHHHHHHHHHST
T ss_pred EEEEEECCHHHHHHHHHHhC
Confidence 35689999999999999884
No 28
>d2cqha1 d.58.7.1 (A:2-81) IGF-II mRNA-binding protein 2 isoform A {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.83 E-value=29 Score=18.21 Aligned_cols=18 Identities=28% Similarity=0.248 Sum_probs=16.0
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.++++|+-|.+.|.
T Consensus 41 FV~f~~~~~A~~Ai~~ln 58 (80)
T d2cqha1 41 FVDYPDQNWAIRAIETLS 58 (80)
T ss_dssp EECCSCHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 388999999999999875
No 29
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=25.51 E-value=15 Score=19.57 Aligned_cols=18 Identities=33% Similarity=0.359 Sum_probs=16.0
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.++++|+-|.+.|.
T Consensus 52 fV~f~~~~~A~~Ai~~l~ 69 (85)
T d1b7fa2 52 FVRYNKREEAQEAISALN 69 (85)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHHC
Confidence 389999999999999874
No 30
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.48 E-value=15 Score=19.20 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=15.9
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.++++|+-|.+.|.
T Consensus 48 fv~f~~~~~a~~a~~~l~ 65 (82)
T d1fxla1 48 FVNYIDPKDAEKAINTLN 65 (82)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 488999999999998884
No 31
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.04 E-value=16 Score=19.36 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=15.5
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.++++|+-|.+.|.
T Consensus 55 fV~f~~~~~A~~Ai~~l~ 72 (83)
T d2cqca1 55 FVYFENVDDAKEAKERAN 72 (83)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHcC
Confidence 488999999999998763
No 32
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.93 E-value=17 Score=20.39 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=16.2
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.+.++|+-|++.|.
T Consensus 60 FV~f~~~e~A~~A~~~ln 77 (101)
T d2cq2a1 60 FARYRTTEESKRAYVTLN 77 (101)
T ss_dssp EEEESSHHHHHHHHHHTT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 378999999999999886
No 33
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.84 E-value=17 Score=19.18 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=15.5
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.++++|+-|.+.+.
T Consensus 45 fV~f~~~~~A~~Ai~~l~ 62 (78)
T d1no8a_ 45 DVHFERKADALKAMKQYN 62 (78)
T ss_dssp EEEESCHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 488999999999998763
No 34
>d2cpza1 d.58.7.1 (A:383-484) CUG triplet repeat RNA-binding protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.83 E-value=18 Score=20.10 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=16.1
Q ss_pred EEEeCCChhHHHHHHhhc
Q 044191 9 FEVDYESNENASIVYAAL 26 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL 26 (87)
--|.|.++++|+.|.+.|
T Consensus 63 afV~f~~~~~A~~Ai~~l 80 (102)
T d2cpza1 63 GFVSYDNPVSAQAAIQSM 80 (102)
T ss_dssp EEEECSSHHHHHHHHHHH
T ss_pred eEEEeCCHHHHHHHHHHh
Confidence 468999999999999887
No 35
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.79 E-value=23 Score=19.27 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=24.1
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEe
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEA 54 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a 54 (87)
=|-|.+.+.|+-|.+.+.-++. .+.|..|.|.|+-
T Consensus 49 fV~f~~~~~A~~A~~~l~~~~~----------~~~gr~l~V~~s~ 83 (89)
T d1x4da1 49 FIEMATTEDAQAAVDYYTTTPA----------LVFGKPVRVHLSQ 83 (89)
T ss_dssp EEEESSHHHHHHHHHHHHHSCC----------EETTEECEEEEEC
T ss_pred EEEEcchhhHHHHHHHHhhCCC----------ccCCceEEEEECC
Confidence 3789999999999998865442 2344556666643
No 36
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9 (SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.60 E-value=16 Score=20.34 Aligned_cols=17 Identities=24% Similarity=0.343 Sum_probs=15.0
Q ss_pred EEeCCChhHHHHHHhhc
Q 044191 10 EVDYESNENASIVYAAL 26 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL 26 (87)
-|.|.++++|+.|.+.|
T Consensus 54 fV~f~~~~~a~~Ai~~l 70 (98)
T d1wg4a_ 54 MVEYLRKEDMEYALRKL 70 (98)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHh
Confidence 47899999999999875
No 37
>d1azta1 a.66.1.1 (A:88-201) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.31 E-value=30 Score=20.24 Aligned_cols=23 Identities=4% Similarity=0.049 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCC
Q 044191 64 FSAFVDVLTLETKTIEQFGQGTE 86 (87)
Q Consensus 64 vnsfld~l~Lv~~tm~~f~~~~~ 86 (87)
-++.++.++.+++.|+.|+.+.+
T Consensus 9 ~~Nii~sm~~li~Am~~L~~~i~ 31 (114)
T d1azta1 9 KNNLKEAIETIVAAMSNLVPPVE 31 (114)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC
Confidence 36788999999999999976643
No 38
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.25 E-value=19 Score=19.47 Aligned_cols=18 Identities=17% Similarity=0.324 Sum_probs=16.0
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.+.++|+-|.+.|.
T Consensus 54 fV~f~~~~~A~~Ai~~l~ 71 (90)
T d2cq0a1 54 FISFHRREDAARAIAGVS 71 (90)
T ss_dssp EEEESSHHHHHHHHHHTT
T ss_pred eEEECCHHHHHHHHHHhC
Confidence 589999999999999874
No 39
>d1x5sa1 d.58.7.1 (A:8-97) Cold-inducible RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.11 E-value=19 Score=19.22 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=16.1
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.++++|+-|.+.|.
T Consensus 51 fV~f~~~~~a~~Ai~~l~ 68 (90)
T d1x5sa1 51 FVTFENIDDAKDAMMAMN 68 (90)
T ss_dssp EEECSSHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHHHHcC
Confidence 489999999999999874
No 40
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.96 E-value=17 Score=19.76 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=15.8
Q ss_pred EEEeCCChhHHHHHHhhc
Q 044191 9 FEVDYESNENASIVYAAL 26 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL 26 (87)
--|-|.++++|+-|.+.|
T Consensus 59 aFV~f~~~~~A~~Ai~~l 76 (89)
T d2cpia1 59 AYVTYIRSEDALRAIQCV 76 (89)
T ss_dssp EEEEESSHHHHHHHHHHH
T ss_pred EEEecccchhHHHHHHHh
Confidence 358999999999999876
No 41
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.44 E-value=17 Score=19.93 Aligned_cols=23 Identities=26% Similarity=0.280 Sum_probs=18.2
Q ss_pred EEeCCChhHHHHHHhhcccCcccC
Q 044191 10 EVDYESNENASIVYAALAIDKELQ 33 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~ 33 (87)
-|.|.+.++|+-|.+.|. ..++.
T Consensus 57 fV~f~~~~~A~~A~~~l~-~~~i~ 79 (97)
T d1whya_ 57 YIQYESLDAAQAACAKMR-GFPLG 79 (97)
T ss_dssp EEEESSHHHHHHHHHHHT-TCBCS
T ss_pred EeccCCHHHHHHHHHHhC-CCEeC
Confidence 478999999999999987 34443
No 42
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.35 E-value=20 Score=18.93 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=15.8
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.++++|+-|++.+.
T Consensus 47 fV~f~~~~~A~~A~~~~~ 64 (85)
T d2cpfa1 47 FVEYKKPEQAQKALKQLQ 64 (85)
T ss_dssp EEEESSHHHHHHHHHHST
T ss_pred EEEECCHHHHHHHHHHhC
Confidence 389999999999998774
No 43
>d2ghpa1 d.58.7.1 (A:116-196) U4/U6 snRNA-associated-splicing factor PRP24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.89 E-value=22 Score=18.62 Aligned_cols=17 Identities=29% Similarity=0.329 Sum_probs=14.9
Q ss_pred EEeCCChhHHHHHHhhc
Q 044191 10 EVDYESNENASIVYAAL 26 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL 26 (87)
-|.|.+++.|+-|.+.|
T Consensus 47 fV~f~~~e~A~~Ai~~l 63 (81)
T d2ghpa1 47 YIDVTSKEDARYCVEKL 63 (81)
T ss_dssp EEECSSHHHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHh
Confidence 38899999999999876
No 44
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.33 E-value=21 Score=19.52 Aligned_cols=34 Identities=21% Similarity=0.071 Sum_probs=24.6
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEec
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEAV 55 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a~ 55 (87)
-|.|.+.+.|+-|++.|.- ..+.|..|.|++...
T Consensus 54 fV~f~~~~~a~~A~~~l~g------------~~~~gr~i~V~~a~~ 87 (99)
T d1whwa_ 54 FVTFMFPEHAVKAYAEVDG------------QVFQGRMLHVLPSTI 87 (99)
T ss_dssp EEEESSHHHHHHHHHHTTT------------EESSSCEEEEEECCC
T ss_pred EEEECCHHHHHHHHHHcCC------------CEECCEEEEEEECCC
Confidence 4889999999999988731 234567777777543
No 45
>d1cipa1 a.66.1.1 (A:61-181) Transducin (alpha subunit), insertion domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.06 E-value=43 Score=19.25 Aligned_cols=28 Identities=7% Similarity=0.095 Sum_probs=21.0
Q ss_pred chHHHHH-HHHHHHHHHHHHHHHhhCCCC
Q 044191 58 RFPRALF-SAFVDVLTLETKTIEQFGQGT 85 (87)
Q Consensus 58 r~LRvsv-nsfld~l~Lv~~tm~~f~~~~ 85 (87)
+..|..| ++.++.++.+++.|+.+|.+.
T Consensus 7 ~~~~~~I~~Ni~~~~~~ll~a~~~l~i~~ 35 (121)
T d1cipa1 7 KQYKAVVYSNTIQSIIAIIRAMGRLKIDF 35 (121)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3334333 678999999999999998764
No 46
>d3begb1 d.58.7.1 (B:121-207) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.59 E-value=20 Score=19.22 Aligned_cols=17 Identities=18% Similarity=0.313 Sum_probs=15.0
Q ss_pred EEeCCChhHHHHHHhhc
Q 044191 10 EVDYESNENASIVYAAL 26 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL 26 (87)
-|.|.++++|+-|++.|
T Consensus 39 fV~f~~~~~a~~Ai~~l 55 (87)
T d3begb1 39 VVEFVRKEDMTYAVRKL 55 (87)
T ss_dssp EEEESSHHHHHHHHHHH
T ss_pred eEEeCCHHHHHHHHHHh
Confidence 48899999999999876
No 47
>d1p5dx4 d.129.2.1 (X:368-463) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.56 E-value=65 Score=17.83 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=41.3
Q ss_pred eEEEEeCCChhHHHHHHhhcc----cCcccC-ccceEEEEE-------EE--CCEEEEEEEeccCchHHHHHHHHHHHHH
Q 044191 7 NDFEVDYESNENASIVYAALA----IDKELQ-PDKVKRQIS-------VI--DGKLLVHFEAVEARFPRALFSAFVDVLT 72 (87)
Q Consensus 7 ~~L~VpF~s~~~A~ia~~sL~----vD~e~~-p~~v~r~l~-------v~--g~~L~v~~~a~d~r~LRvsvnsfld~l~ 72 (87)
-.+.|+++.++...++.+... .+.+.. -+.++..+. -. ...|.|.++|.+...+..=.+-+.+.|+
T Consensus 7 pEi~i~~~d~~K~~ii~~l~~~~~~~~~~i~~iDGvrv~~~dgW~liR~SnTEP~lri~~Ea~s~~~~~~l~~~~~~~l~ 86 (96)
T d1p5dx4 7 PEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLK 86 (96)
T ss_dssp CCEEEECCTTTHHHHHHHHHHHCCCCSSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCcccccCcHHHHHHHHHHHHHhhhccCceeeecceEEEecccEEEEEeCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH
Confidence 368899999888777666543 222222 255565542 11 3589999999988777666655555544
No 48
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.29 E-value=22 Score=19.09 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=24.1
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEE
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFE 53 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~ 53 (87)
-|-|.++++|+.|.+.|.- ..+.|..|.|.|.
T Consensus 51 fV~f~~~~~A~~ai~~l~~------------~~i~g~~l~v~~a 82 (89)
T d2cqba1 51 FVEFELAEDAAAAIDNMNE------------SELFGRTIRVNLA 82 (89)
T ss_dssp EECCSSHHHHHHHHHHHTT------------EEETTEEEEEEEC
T ss_pred EEEECCHHHHHHHHHHcCC------------CEECCEEEEEEEe
Confidence 4889999999999988731 2346777888774
No 49
>d2cpxa1 d.58.7.1 (A:291-392) RNA-binding protein 41, RBM41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.26 E-value=27 Score=18.97 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=23.7
Q ss_pred EEEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEE
Q 044191 9 FEVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFE 53 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~ 53 (87)
--|-|.+++.|+-|.+.|.- . .+.|..|.|.|.
T Consensus 63 ~fV~f~~~~~A~~Ai~~l~g-~-----------~~~g~~l~V~~a 95 (102)
T d2cpxa1 63 AFITFPNKEIAWQALHLVNG-Y-----------KLYGKILVIEFG 95 (102)
T ss_dssp EEEECSSHHHHHHHHHHSTT-C-----------BCSSCBCEEEEC
T ss_pred ceEEeccHHHHHHHHHHhCC-C-----------EECCEEEEEEeC
Confidence 35899999999999998731 1 234666777765
No 50
>d2cpea1 d.58.7.1 (A:353-453) RNA-binding protein EWS {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.23 E-value=23 Score=19.14 Aligned_cols=19 Identities=21% Similarity=0.200 Sum_probs=16.1
Q ss_pred EEEeCCChhHHHHHHhhcc
Q 044191 9 FEVDYESNENASIVYAALA 27 (87)
Q Consensus 9 L~VpF~s~~~A~ia~~sL~ 27 (87)
--|-|.++++|.-|++.|.
T Consensus 61 afV~f~~~~~a~~Ai~~l~ 79 (101)
T d2cpea1 61 ATVSYEDPPTAKAAVEWFD 79 (101)
T ss_dssp EEEEBSSHHHHHHHHHHHT
T ss_pred eeEEecCHHHHHHHHHHhC
Confidence 4589999999999988764
No 51
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.10 E-value=21 Score=19.05 Aligned_cols=18 Identities=11% Similarity=0.158 Sum_probs=15.8
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|-|.+++.|+-|.+.|.
T Consensus 52 fV~f~~~~~a~~Ai~~ln 69 (85)
T d1fxla2 52 FIRFDKRIEAEEAIKGLN 69 (85)
T ss_dssp EEEESSHHHHHHHHHHHT
T ss_pred EEEEcCHHHHHHHHHHhC
Confidence 378999999999999874
No 52
>d1tada1 a.66.1.1 (A:57-177) Transducin (alpha subunit), insertion domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.71 E-value=49 Score=19.08 Aligned_cols=30 Identities=7% Similarity=-0.014 Sum_probs=22.4
Q ss_pred cCchHHHHH-HHHHHHHHHHHHHHHhhCCCC
Q 044191 56 EARFPRALF-SAFVDVLTLETKTIEQFGQGT 85 (87)
Q Consensus 56 d~r~LRvsv-nsfld~l~Lv~~tm~~f~~~~ 85 (87)
+.+..|..| ++.++.++.+++.|+.+|.+.
T Consensus 5 E~~~~~~~I~~Nii~~m~~li~a~~~l~i~~ 35 (121)
T d1tada1 5 ECLEFIAIIYGNTLQSILAIVRAMTTLNIQY 35 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 334444444 678999999999999999664
No 53
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.14 E-value=29 Score=18.98 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=24.0
Q ss_pred EEeCCChhHHHHHHhhcccCcccCccceEEEEEEECCEEEEEEEec
Q 044191 10 EVDYESNENASIVYAALAIDKELQPDKVKRQISVIDGKLLVHFEAV 55 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~vD~e~~p~~v~r~l~v~g~~L~v~~~a~ 55 (87)
-|.|.+.+.|+-|.+.|. ... +.|..|.|++...
T Consensus 54 fV~f~~~~~a~~ai~~l~-~~~-----------~~g~~i~V~~a~~ 87 (104)
T d1p1ta_ 54 FCEYQDQETALSAMRNLN-GRE-----------FSGRALRVDNAAS 87 (104)
T ss_dssp EEECSCHHHHHHHHHHSS-SBS-----------CSSSCBEEEETTC
T ss_pred EEEECCHHHHHHHHHHcC-CCE-----------ECCEEEEEEECCC
Confidence 488999999999998873 222 2356677777443
No 54
>d1x5ua1 d.58.7.1 (A:7-99) Splicing factor 3B subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.11 E-value=25 Score=19.07 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=15.9
Q ss_pred EEeCCChhHHHHHHhhcc
Q 044191 10 EVDYESNENASIVYAALA 27 (87)
Q Consensus 10 ~VpF~s~~~A~ia~~sL~ 27 (87)
-|.|.+.+.|+-|.+.|.
T Consensus 55 fV~f~~~~~A~~Ai~~l~ 72 (93)
T d1x5ua1 55 FVEFLSEEDADYAIKIMD 72 (93)
T ss_dssp EEEESSHHHHHHHHHHSS
T ss_pred EEEECCHHHHHHHHHHcC
Confidence 488999999999999874
Done!