BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044192
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRY--YGPNQDLNLLEFAYELWKNE 58
G++ PEY+ G S K DV+ YGV+LL++I+G+R + D+ LL++ L K +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 59 EGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+ D L + ++ + +Q+ALLC Q + +RP + E++ ML +
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRY--YGPNQDLNLLEFAYELWKNE 58
G++ PEY+ G S K DV+ YGV+LL++I+G+R + D+ LL++ L K +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 59 EGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+ D L + ++ + +Q+ALLC Q + +RP + E++ ML +
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GY+ PEY KG + K DVYS+GV+L +++ + P + +NL E+A E N +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
+ DP+L D L + A+ C+ ++ DRP++ ++L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GY+ PEY KG + K DVYS+GV+L +++ + P + +NL E+A E N +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
+ DP+L D L + A+ C+ ++ DRP++ ++L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
Y+ PE +R G + K D+YS+GV+LL+II+G + Q L L + +
Sbjct: 200 AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTI 257
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
++ D ++D+ S + +A C+ E RP + ++ +L TA+
Sbjct: 258 EDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
Y+ PE +R G + K D+YS+GV+LL+II+G + Q L L + +
Sbjct: 200 AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTI 257
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
++ D ++D+ S + +A C+ E RP + ++ +L TA+
Sbjct: 258 EDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
Y+ PE +R G + K D+YS+GV+LL+II+G + Q L L + +
Sbjct: 194 AYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTI 251
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
++ D ++D+ S + +A C+ E RP + ++ +L TA+
Sbjct: 252 EDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
Y PE +R G + K D+YS+GV+LL+II+G + Q L L + +
Sbjct: 191 AYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTI 248
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
++ D +D+ S + +A C+ E RP + ++ +L TA+
Sbjct: 249 EDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 23/132 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETANIKVPRKPA 119
+F LD + + R + +C Q N RP LEI+ +L ++ P P
Sbjct: 242 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH----PSFPE 295
Query: 120 FSVKSDEDECIP 131
S E+ P
Sbjct: 296 VSFFHSEENKAP 307
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 239
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 240 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 62 EFFDPS--LDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 243 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 243 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 243 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 243 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 243 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 19/109 (17%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ D++S+GV+L +I S L E Y+ NE+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 243
Query: 62 EFF--DPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
+F LD + + R + +C Q N RP LEI+ +L ++
Sbjct: 244 KFVMDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG--PNQDLNLLEFAYELWKNEE 59
+ PE + +S+K DV+++GVLL +I + S Y G P+Q LLE Y + + E
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
E ++LMR C Q N +DRP+ EI
Sbjct: 235 CPE----------KVYELMRA------CWQWNPSDRPSFAEI 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG--PNQDLNLLEFAYELWKNEE 59
+ PE + +S+K DV+++GVLL +I + S Y G P+Q LLE Y + + E
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
E ++LMR C Q N +DRP+ EI
Sbjct: 235 CPE----------KVYELMRA------CWQWNPSDRPSFAEI 260
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 263
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 264 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 296
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +GIY++K DV+SYG+LL +I S
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 263
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 264 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 296
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 264
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 265 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 297
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 255
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 256 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 288
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 264
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 265 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 297
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 278
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 279 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 311
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 264
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 265 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 297
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG--PNQDLNLLEFAYELWKNEE 59
+ PE + +S+K DV+++GVLL +I + S Y G P+Q LLE Y + + E
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDPSQVYELLEKDYRMERPEG 234
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
E ++LMR C Q N +DRP+ EI
Sbjct: 235 CPE----------KVYELMRA------CWQWNPSDRPSFAEI 260
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 278
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 279 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 311
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 281
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 282 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 314
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 304
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 305 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 337
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 280
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 281 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 313
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 235
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M +++ +C Q N RP+ LEI++ + E
Sbjct: 236 RFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSIKEE 282
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 278
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 279 --MDPPKNCPGPVYRIMT------QCWQHQPEDRPNFAIIL 311
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 270
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 271 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 303
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++PPE +GI++ K D +S+GVLL +I S NQ+ +LEF +
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFVTSGGR----- 290
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
DP + +++M C Q DRP IL
Sbjct: 291 --MDPPKNCPGPVYRIM------TQCWQHQPEDRPNFAIIL 323
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSR 37
++ PE +R ++S DV+SYGVLL ++++G+ R
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M +++ +C Q N RP+ LEI++ + E
Sbjct: 238 RFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG IYS K DV+SYGVLL +I S S Y G D
Sbjct: 250 YKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-LGGSPYPGVQMD 308
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
+ + EG P + QI L C + +RP E++
Sbjct: 309 EDFCS------RLREGMRMRAPE-------YSTPEIYQIMLDCWHRDPKERPRFAELVEK 355
Query: 105 LNN 107
L +
Sbjct: 356 LGD 358
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 237
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 238 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 245 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 251 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 241
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 242 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 288
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 240
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 241 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 287
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 250
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 251 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 297
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 244
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 245 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 244 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 243
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 244 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 290
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE ++ G+++ DV+S+GV+L +I + L E Y+ NE+
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVL 272
Query: 62 EF-FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNE 108
F + L D M ++ +C Q N RP+ LEI++ + E
Sbjct: 273 RFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPKMRPSFLEIISSIKEE 319
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQ 43
Y+ PE +R G Y K DV+S GV+L ++SG T +YG N+
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG+++ +++S + NQD + +E Y L
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------ 253
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D + +LM L C Q+ +DRP +I+ ML+ N
Sbjct: 254 ----PPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 236
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 237 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 229
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 230 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 233
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 234 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 262
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 227
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 228 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 256
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 227
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 228 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 256
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 228
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 229 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 257
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 227
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRP 96
P + ++LMR LC +E DRP
Sbjct: 228 RMVRPD-NCPEELYQLMR------LCWKERPEDRP 255
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 235
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 236 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 264
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 233
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 234 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 237
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 238 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 266
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG+++ +++S + NQD + +E Y L
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------ 232
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D + +LM L C Q+ +DRP +I+ ML+ N
Sbjct: 233 ----PPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 232
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 233 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 227
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 228 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 256
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG+++ +++S + NQD + +E Y L
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------ 238
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D + +LM L C Q+ +DRP +I+ ML+ N
Sbjct: 239 ----PPPMDCPIALHQLM------LDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 223
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 224 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 252
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG+++ +++S + NQD + +E Y L
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL------ 246
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETANIKVPRKPA 119
PS D +A Q+ L C Q+ RP EI+ ML+ K+ R PA
Sbjct: 247 -----PSPMDCPAA-----LYQLMLDCWQKERNSRPKFDEIVNMLD------KLIRNPA 289
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 34.3 bits (77), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE + G +++K DV+S+G+LL +I++ R P + E L E G
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI-----PYPGMTNPEVIQNL---ERGY 222
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPA 97
P + ++LMR LC +E DRP
Sbjct: 223 RMVRPD-NCPEELYQLMR------LCWKERPEDRPT 251
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 249 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 307
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 308 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
Query: 105 LNN 107
L N
Sbjct: 355 LGN 357
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 251 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 309
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 310 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
Query: 105 LNN 107
L N
Sbjct: 357 LGN 359
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 259
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 260 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
Query: 105 LNN 107
L N
Sbjct: 307 LGN 309
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 257
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 258 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
Query: 105 LNN 107
L N
Sbjct: 305 LGN 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 248
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 249 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Query: 105 LNN 107
L N
Sbjct: 296 LGN 298
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 302
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 303 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
Query: 105 LNN 107
L N
Sbjct: 350 LGN 352
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQ 43
Y+ PE +R G Y K DV+S GV+L ++SG T +YG N+
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQ 43
Y+ PE +R G Y K DV+S GV+L ++SG T +YG N+
Sbjct: 189 YIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE ++ ++ DV+SYG+++ +++S + NQD +N +E Y L
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL------ 259
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D S+ +LM L C Q++ RP +I+ L+ N
Sbjct: 260 ----PPPMDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 242 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 300
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 301 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
Query: 105 LNN 107
L N
Sbjct: 348 LGN 350
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 253
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 254 ---EEFXRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
Query: 105 LNN 107
L N
Sbjct: 301 LGN 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 248
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 249 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
Query: 105 LNN 107
L N
Sbjct: 296 LGN 298
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 253
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 254 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
Query: 105 LNN 107
L N
Sbjct: 301 LGN 303
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE + G +++K DV+S+G+LL++I++ R
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 268
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 269 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 2 YVPPEYVRKG-----------------IYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y P+YVRKG +Y+++ DV+S+GVLL +I S S Y G D
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID 294
Query: 45 LNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTM 104
EF L +EGT P + Q L C + RP E++
Sbjct: 295 ---EEFCRRL---KEGTRMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
Query: 105 LNN 107
L N
Sbjct: 342 LGN 344
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 268
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 269 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE ++ ++ DV+SYG+++ +++S + NQD +N +E Y L
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL------ 233
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D S+ +LM L C Q++ RP +I+ L+ N
Sbjct: 234 ----PPPMDCPSALHQLM------LDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 268
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 269 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 259
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 260 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 268
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 269 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 307
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE + +Y+++ DV+S+GVLL +I S S Y G D EF L +EGT
Sbjct: 207 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-LGASPYPGVKID---EEFCRRL---KEGT 259
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNN 107
P + Q L C + RP E++ L N
Sbjct: 260 RMRAPD-------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 298
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE + G +++K DV+S+G+LL++I++ R
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE + G +++K DV+S+G+LL++I++ R
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 437
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 438 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 469
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 476
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 477 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 508
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 235
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 236 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 235
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 236 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 235
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 236 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE +R+ +S K DV+S+G+LL +I S R
Sbjct: 171 WTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 232
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 233 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 234
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 235 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 231
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 232 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 231
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 232 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 235
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 236 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 235
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 236 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 434
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 435 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 466
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 232
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 233 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 232
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 233 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 264
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 33.1 bits (74), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 230
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 231 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYG----PNQDLN----LLEFAYE 53
+ PE + +S+K DV+++GVLL +I + YG P DL+ LLE Y
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT-------YGMSPYPGIDLSQVYELLEKDYR 243
Query: 54 LWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
+ + E E ++LMR C Q N +DRP+ EI
Sbjct: 244 MERPEGCPE----------KVYELMRA------CWQWNPSDRPSFAEI 275
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 240
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 241 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 240
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 241 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 267
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 268 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 257
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 258 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE ++ ++ DV+SYG+++ +++S + NQD + +E Y L
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL------ 267
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P+ D + Q+ L C Q+ A+RP +I+ +L+ N
Sbjct: 268 -----PAPMDCPAG-----LHQLMLDCWQKERAERPKFEQIVGILDKMIRN 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ DV+SYG++L +++S + NQD + ++ Y L
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETAN 111
P +D ++ ++LM L C Q++ +RP +I+++L+ N
Sbjct: 270 ----PPPMDCPAALYQLM------LDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE +R+ +S K DV+S+G+LL +I S R
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE +R+ +S K DV+S+G+LL +I S R
Sbjct: 180 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
+ PE + G +++K DV+S+G+LL +I++
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE +R+ +S K DV+S+G+LL +I S R
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 224
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 225 RLYKPRLAST-------HVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 222
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 223 RLYKPRLAST-------HVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 226 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.6 bits (70), Expect = 0.17, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE +RK Y K DV+S GV+L ++ G +G D +L+ + E+G
Sbjct: 172 YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILK------RVEKGK 221
Query: 62 EFFDPS-----LDDSSSAWKLMRCMQIALLCVQENAADRPAVLE 100
FDP D++ KLM + + E A + P +++
Sbjct: 222 FSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 265
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ E + +Y+ DV+SYGVLL +I+S T P + E YE K +G
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAEL-YE--KLPQGY 248
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLN 106
P L+ + LMR C +E +RP+ +IL LN
Sbjct: 249 RLEKP-LNCDDEVYDLMR------QCWREKPYERPSFAQILVSLN 286
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ E + +Y+ DV+SYGVLL +I+S T P + E YE K +G
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAEL-YE--KLPQGY 255
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLN 106
P L+ + LMR C +E +RP+ +IL LN
Sbjct: 256 RLEKP-LNCDDEVYDLMR------QCWREKPYERPSFAQILVSLN 293
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 221
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 222 RLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ E + +Y+ DV+SYGVLL +I+S T P + E YE K +G
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAEL-YE--KLPQGY 258
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLN 106
P L+ + LMR C +E +RP+ +IL LN
Sbjct: 259 RLEKP-LNCDDEVYDLMR------QCWREKPYERPSFAQILVSLN 296
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ PN DL+ + + + KN
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGE------PPNSDLHPMRVLFLIPKNSP-- 233
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
P+L+ S + C+ ++ RP E+L
Sbjct: 234 ----PTLEGQHSK----PFKEFVEACLNKDPRFRPTAKELL 266
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 232 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.2 bits (69), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 221
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 222 RLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 219
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 220 RLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PE YS K DV+S+GVL+ ++ S + P ++ + E ++ G
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI-----PYENRSNSEVVEDI---STGF 241
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTML 105
+ P L + QI C +E DRPA +L L
Sbjct: 242 RLYKPRLAST-------HVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+++ DV+SYG+LL +I S
Sbjct: 234 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE + + Y+ K D++S G LL ++ + + S +YG +L Y L K E
Sbjct: 202 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYGDKMNL------YSLCKKIEQC 253
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAV 98
++ P L + +L Q+ +C+ + RP V
Sbjct: 254 DY--PPLPSDHYSEEL---RQLVNMCINPDPEKRPDV 285
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 231
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 232 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 231
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 232 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 216
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 217 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 222
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 223 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 264
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++++ R
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 167 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 211
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 212 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 253
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V + +S D +SYGVL+ ++++G
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 215
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 216 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 257
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 258 GARDLISRLLKHNPSQRPMLR 278
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
+ PPE + +S K D++++GVL+ +I S L + YE + N E
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS---------------LGKMPYERFTNSETA 216
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
E L + I C E A +RP +L+
Sbjct: 217 EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 198 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 258 GARDLISRLLKHNPSQRPMLR 278
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPN--QDLNLLEFAYELWKNEE 59
+ PE + +S+K DV+++GVLL +I + S Y G + Q +LLE Y + E
Sbjct: 197 WTAPESLAYNTFSIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYDLLEKGYRM----E 251
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLE 100
E P + ++LMR C + + ADRP+ E
Sbjct: 252 QPEGCPPKV------YELMRA------CWKWSPADRPSFAE 280
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+PPE + ++ K D++S GVL + + GK
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4DKC|A Chain A, Crystal Structure Of Human Interleukin-34
pdb|4DKC|B Chain B, Crystal Structure Of Human Interleukin-34
pdb|4DKE|A Chain A, Crystal Structure Of Human Interleukin-34 Bound To Fab1.1
pdb|4DKE|B Chain B, Crystal Structure Of Human Interleukin-34 Bound To Fab1.1
pdb|4DKF|A Chain A, Crystal Structure Of Human Interleukin-34 Bound To Fab2
pdb|4DKF|B Chain B, Crystal Structure Of Human Interleukin-34 Bound To Fab2
Length = 190
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAAD---RPAVLEILTMLNNETANIKVPR 116
TE L + +WK ++ ++ LL VQ+ D P V +L++LN N+K+ R
Sbjct: 84 ATESVQDVLLEGHPSWKYLQEVETLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVR 143
Query: 117 KPAF 120
A
Sbjct: 144 PKAL 147
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DKD|A Chain A, Crystal Structure Of Human Interleukin-34 Bound To Human
Csf-1r
pdb|4DKD|B Chain B, Crystal Structure Of Human Interleukin-34 Bound To Human
Csf-1r
Length = 185
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 60 GTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAAD---RPAVLEILTMLNNETANIKVPR 116
TE L + +WK ++ ++ LL VQ+ D P V +L++LN N+K+ R
Sbjct: 84 ATESVQDVLLEGHPSWKYLQEVETLLLNVQQGLTDVEVSPKVESVLSLLNAPGPNLKLVR 143
Query: 117 KPAF 120
A
Sbjct: 144 PKAL 147
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R K YS + DVY++G++L ++++G+
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 233 GARDLISRLLKHNPSQRPMLR 253
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 233 GARDLISRLLKHNPSQRPMLR 253
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 234 GARDLISRLLKHNPSQRPMLR 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 237 GARDLISRLLKHNPSQRPMLR 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 237 GARDLISRLLKHNPSQRPMLR 257
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 234 GARDLISRLLKHNPSQRPMLR 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 237 GARDLISRLLKHNPSQRPMLR 257
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
+ PE + G +++K +V+S+G+LL +I++
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 231 GARDLISRLLKHNPSQRPMLR 251
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GYV PE + + YS D +S GV+ ++ G Y P D N + ++ K E
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDAKLFEQILKAE-- 234
Query: 61 TEFFDPSLDD-SSSAWKLMRCM 81
EF P DD S SA +R +
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHL 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+PPE + ++ K D++S GVL + + GK
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+PPE + ++ K D++S GVL + + GK
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GYV PE + + YS D +S GV+ ++ G Y P D N + ++ K E
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDAKLFEQILKAE-- 234
Query: 61 TEFFDPSLDD-SSSAWKLMRCM 81
EF P DD S SA +R +
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHL 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 229 GARDLISRLLKHNPSQRPMLR 249
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 236 GARDLISRLLKHNPSQRPMLR 256
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 235 GARDLISRLLKHNPSQRPMLR 255
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GYV PE + + YS D +S GV+ ++ G Y P D N + ++ K E
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDAKLFEQILKAE-- 234
Query: 61 TEFFDPSLDD-SSSAWKLMRCM 81
EF P DD S SA +R +
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHL 256
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GYV PE + + YS D +S GV+ ++ G Y P D N + ++ K E
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDAKLFEQILKAE-- 234
Query: 61 TEFFDPSLDD-SSSAWKLMRCM 81
EF P DD S SA +R +
Sbjct: 235 YEFDSPYWDDISDSAKDFIRHL 256
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + G +S+ D++SYGV+L ++ S
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK---RTSRYYGPNQDLNLLEFAYELWKNE 58
Y+PPE + ++ K D++S GVL + + GK + Y + ++ +EF + + E
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
Query: 59 EGTEFFDPSLDDSSSAWKLMR 79
+ L + S ++R
Sbjct: 232 GARDLISRLLKHNPSQRPMLR 252
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + G +S+ D++SYGV+L ++ S
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 7/32 (21%), Positives = 24/32 (75%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE + + +Y+ + D++S G+++++++ G+
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLE--FAYELWKNEE 59
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE F + EE
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVG----RYPIPPPDAKELEAIFGRPVVDGEE 234
Query: 60 G 60
G
Sbjct: 235 G 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE +RK Y K DV+S GV+L +++G
Sbjct: 204 YIAPEVLRKK-YDEKCDVWSIGVILFILLAG 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
++ PE YS K DV+S+G++L ++I+ ++
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE ++K YS D+++ GV+L ++ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE ++K YS D+++ GV+L ++ G
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
GY+ PE V+ Y+ D ++ G LL ++I+G+
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
GY+ PE V+ Y+ D ++ G LL ++I+G+
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
++ PE YS K DV+S+G++L ++I+ ++
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++PPE + Y+ + DV++YGV+L +I S
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE ++K YS D+++ GV+L ++ G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ PN D++ + + + KN T
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEP------PNSDMHPMRVLFLIPKNNPPT 239
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
+ D + ++K + C+ ++ + RP E+L
Sbjct: 240 -----LVGDFTKSFK-----EFIDACLNKDPSFRPTAKELL 270
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 23/119 (19%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ D +SYG+++ +++S + NQD +N +E Y L
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL------ 240
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETANIKVPRKPA 119
P D +S +LM L C Q++ RP ++++ L+ K+ R PA
Sbjct: 241 ----PPPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSALD------KMIRNPA 283
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE V + Y K D++S G++ +++I G+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE ++K YS D+++ GV+L ++ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE V + Y K D++S G++ +++I G+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE V + Y K D++S G++ +++I G+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE V + Y K D++S G++ +++I G+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE V + Y K D++S G++ +++I G+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.3 bits (64), Expect = 0.98, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V G Y K DV+S GV+L ++SG
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 23/119 (19%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD-LNLLEFAYELWKNEEG 60
+ PE + ++ D +SYG+++ +++S + NQD +N +E Y L
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL------ 242
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLNNETANIKVPRKPA 119
P D +S +LM L C Q++ RP ++++ L+ K+ R PA
Sbjct: 243 ----PPPPDCPTSLHQLM------LDCWQKDRNARPRFPQVVSALD------KMIRNPA 285
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
GYV PE + + YS D +S GV+ ++ G Y P D N + ++ K E
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDSKLFEQILKAE-- 238
Query: 61 TEFFDPSLDD-SSSAWKLMRCM 81
EF P DD S SA +R +
Sbjct: 239 YEFDSPYWDDISDSAKDFIRNL 260
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQII 30
Y+ PE + YS K D++S G++L +++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+PPE + + K D++S GVL + + GK
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGP--NQDLNLLEFAYEL 54
Y+ PE +R Y D ++ GVL+ ++++G+ G N D N ++ +++
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 241
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQII 30
Y+ PE + YS K D++S G++L +++
Sbjct: 196 YMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGP--NQDLNLLEFAYEL 54
Y+ PE +R Y D ++ GVL+ ++++G+ G N D N ++ +++
Sbjct: 219 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V G Y K DV+S GV+L ++SG
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+SYG+ L ++ S
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRT 35
+ PE G +++K DV+S+G+LL ++ + R
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V G Y K DV+S GV+L ++SG
Sbjct: 217 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V G Y K DV+S GV+L ++SG
Sbjct: 218 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE +RK Y K DV+S GV+L ++ G +G D +L+ + E+G
Sbjct: 189 YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILK------RVEKGK 238
Query: 62 EFFDP-----SLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEI 101
FDP D++ KLM + + E A + P +++
Sbjct: 239 FSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGP--NQDLNLLEFAYEL 54
Y+ PE +R Y D ++ GVL+ ++++G+ G N D N ++ +++
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R +S + DVYSYG++L ++++G+
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGP--NQDLNLLEFAYEL 54
Y+ PE +R Y D ++ GVL+ ++++G+ G N D N ++ +++
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.9 bits (63), Expect = 1.2, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE ++K Y+ K DV+S GV++ ++ G +G D ++++ K E+G
Sbjct: 214 YIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPP---FGGQNDQDIIK------KVEKGK 263
Query: 62 EFFDPS-----LDDSSSAWKLMRCMQIALLCVQENA 92
+FD + D++ KLM C E A
Sbjct: 264 YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+SYG+ L ++ S
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + IY+ + DV+S+GVLL +I +
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
+ PE + G YS + DV+S+G+LL + S
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
Y+ PE + + Y++ D +S+G L + I+G R
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKR 34
Y+ PE + + Y++ D +S+G L + I+G R
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y+ PE + Y+ D +S+GVLL +++ G+ S ++G +++
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 225
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+SYG+ L ++ S
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1A6A|A Chain A, The Structure Of An Intermediate In Class Ii Mhc
Maturation: Clip Bound To Hla-dr3
Length = 176
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 9 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 61
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 62 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 109
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R YS + DVY++G++L ++++G+
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
+ PE + G YS + DV+S+G+LL + S
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R YS + DVY++G++L ++++G+
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4I0P|C Chain C, Hla-do In Complex With Hla-dm
pdb|4I0P|G Chain G, Hla-do In Complex With Hla-dm
Length = 181
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 49 EFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAV---LEILTML 105
+F +E +EE + F L S + W+L A Q A A+ L+IL
Sbjct: 21 QFTHEF--DEE--QLFSVDLKKSEAVWRLPEFGDFARFDPQGGLAGIAAIKAHLDILVER 76
Query: 106 NNETANIKVPRKPAFSVKSDEDECIPEVKICSVND 140
+N + I VP + KS + P + IC V++
Sbjct: 77 SNRSRAINVPPRVTVLPKSRVELGQPNILICIVDN 111
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y+ PE + Y+ D +S+GVLL +++ G+ S ++G +++
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 224
>pdb|1KLG|A Chain A, Crystal Structure Of Hla-Dr1TPI(23-37, Thr28-->ile Mutant)
Complexed With Staphylococcal Enterotoxin C3 Variant 3b2
(Sec3-3b2)
Length = 177
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 10 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 62
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 63 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 110
>pdb|4H1L|A Chain A, Tcr Interaction With Peptide Mimics Of Nickel Offers
Structural Insights In Nickel Contact Allergy
pdb|4H1L|D Chain D, Tcr Interaction With Peptide Mimics Of Nickel Offers
Structural Insights In Nickel Contact Allergy
Length = 178
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 11 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 63
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 64 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 111
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+SYG+ L ++ S
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2IPK|A Chain A, Crystal Structure Of The Mhc Class Ii Molecule Hla-Dr1 In
Complex With The Fluorogenic Peptide, Acpkxvkqntlklat
(X3-
[5-(Dimethylamino)-1,3-Dioxo-1,
3-Dihydro-2h-Isoindol-2-Yl]- L-Alanine) And The
Superantigen, Sec3 Variant 3b2
Length = 183
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 14 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 66
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 67 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 114
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 2 YVPPEYVR---KGIYSMKYDVYSYGVLLLQIISGK 33
++ PE +R YS + DVY++G++L ++++G+
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+SYG+ L ++ S
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1BX2|A Chain A, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed
With A Peptide From Human Myelin Basic Protein
pdb|1BX2|D Chain D, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed
With A Peptide From Human Myelin Basic Protein
pdb|1T5W|A Chain A, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr)
pdb|1T5W|D Chain D, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr)
Length = 180
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 12 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 64
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 65 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 112
>pdb|1SEB|A Chain A, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And
The Bacterial Superantigen Seb
pdb|1SEB|E Chain E, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And
The Bacterial Superantigen Seb
pdb|2SEB|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With A
Peptide From Human Collagen Ii
pdb|1D5M|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptide
And Seb
pdb|1D5X|A Chain A, X-ray Crystal Structure Of Hla-dr4 Complexed With
Dipeptide Mimetic And Seb
pdb|1D5Z|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With
Peptidomimetic And Seb
pdb|1D6E|A Chain A, Crystal Structure Of Hla-Dr4 Complex With Peptidomimetic
And Seb
pdb|1FV1|A Chain A, Structural Basis For The Binding Of An Immunodominant
Peptide From Myelin Basic Protein In Different Registers
By Two Hla-Dr2 Alleles
pdb|1FV1|D Chain D, Structural Basis For The Binding Of An Immunodominant
Peptide From Myelin Basic Protein In Different Registers
By Two Hla-Dr2 Alleles
pdb|1FYT|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell
Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii
Molecule, Hla-Dr1
pdb|1HQR|A Chain A, Crystal Structure Of A Superantigen Bound To The High-
Affinity, Zinc-Dependent Site On Mhc Class Ii
pdb|1J8H|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell
Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii
Molecule, Hla-Dr4
pdb|1ZGL|A Chain A, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|D Chain D, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|G Chain G, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|1ZGL|J Chain J, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
pdb|3C5J|A Chain A, Crystal Structure Of Hla Dr52c
Length = 181
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|1KLU|A Chain A, Crystal Structure Of Hla-Dr1TPI(23-37) Complexed With
Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)
Length = 179
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 10 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 62
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 63 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 110
>pdb|1HXY|A Chain A, Crystal Structure Of Staphylococcal Enterotoxin H In
Complex With Human Mhc Class Ii
pdb|1H15|A Chain A, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed
With A Peptide From Epstein Barr Virus Dna Polymerase
pdb|1H15|D Chain D, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed
With A Peptide From Epstein Barr Virus Dna Polymerase
pdb|1LO5|A Chain A, Crystal Structure Of The D227a Variant Of Staphylococcal
Enterotoxin A In Complex With Human Mhc Class Ii
pdb|1JWM|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1(Ha Peptide 306-318) With The
Superantigen Sec3
pdb|1JWS|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1 (Ha Peptide 306-318) With The
Superantigen Sec3 Variant 3b1
pdb|1JWU|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii
Molecule Hla-Dr1 (Ha Peptide 306-318) With The
Superantigen Sec3 Variant 3b2
pdb|1PYW|A Chain A, Human Class Ii Mhc Protein Hla-Dr1 Bound To A Designed
Peptide Related To Influenza Virus Hemagglutinin,
Fvkqna(Maa)al, In Complex With Staphylococcal
Enterotoxin C3 Variant 3b2 (Sec3-3b2)
pdb|2G9H|A Chain A, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In
Complex With A Human Mhc Class Ii Molecule
pdb|2IAM|A Chain A, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|A Chain A, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|F Chain F, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|K Chain K, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2IAN|P Chain P, Structural Basis For Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted Tcr
pdb|2Q6W|A Chain A, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound
Platelet Integrin Peptide Associated With Fetal And
Neonatal Alloimmune Thrombocytopenia
pdb|2Q6W|D Chain D, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound
Platelet Integrin Peptide Associated With Fetal And
Neonatal Alloimmune Thrombocytopenia
pdb|2XN9|D Chain D, Crystal Structure Of The Ternary Complex Between Human T
Cell Receptor, Staphylococcal Enterotoxin H And Human
Major Histocompatibility Complex Class Ii
pdb|3O6F|A Chain A, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound
To Mhc Class Ii Self-Ligand MbpHLA-Dr4
pdb|3O6F|E Chain E, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound
To Mhc Class Ii Self-Ligand MbpHLA-Dr4
pdb|3QXA|A Chain A, Hla-Dr1 Bound With Clip Peptide
pdb|3QXA|D Chain D, Hla-Dr1 Bound With Clip Peptide
pdb|3T0E|A Chain A, Crystal Structure Of A Complete Ternary Complex Of T Cell
Receptor, Peptide-Mhc And Cd4
pdb|4E41|A Chain A, Structural Basis For The Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor
G4
pdb|4E41|F Chain F, Structural Basis For The Recognition Of Mutant Self By A
Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor
G4
Length = 182
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|3L6F|A Chain A, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With
Phosphopeptide Mart-1
pdb|3S4S|A Chain A, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S4S|D Chain D, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S5L|A Chain A, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
pdb|3S5L|D Chain D, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
Length = 182
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|1T5X|A Chain A, Hla-Dr1 In Complex With A Synthetic Peptide
(Aaysdqatplllspr) And The Superantigen Sec3-3b2
Length = 181
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 12 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 64
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 65 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 112
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V + ++ D +S+GVL+ ++++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 277
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1DLH|A Chain A, Crystal Structure Of The Human Class Ii Mhc Protein
Hla-dr1 Complexed With An Influenza Virus Peptide
pdb|1DLH|D Chain D, Crystal Structure Of The Human Class Ii Mhc Protein
Hla-dr1 Complexed With An Influenza Virus Peptide
pdb|1KG0|A Chain A, Structure Of The Epstein-Barr Virus Gp42 Protein Bound To
The Mhc Class Ii Receptor Hla-Dr1
pdb|1SJE|A Chain A, Hla-Dr1 Complexed With A 16 Residue Hiv Capsid Peptide
Bound In A Hairpin Conformation
pdb|1SJH|A Chain A, Hla-Dr1 Complexed With A 13 Residue Hiv Capsid Peptide
Length = 180
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 11 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 63
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 64 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 111
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V + ++ D +S+GVL+ ++++G
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V + ++ D +S+GVL+ ++++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+ PE V G Y K DV+S GV+L ++SG
Sbjct: 200 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 12 IYSMKYDVYSYGVLLLQIIS-GKRTSRYYGPNQDLNLLEFAYEL 54
IY+ + DV+S+GVLL +I++ G P + NLL+ + +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 12 IYSMKYDVYSYGVLLLQIIS-GKRTSRYYGPNQDLNLLEFAYEL 54
IY+ + DV+S+GVLL +I++ G P + NLL+ + +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
>pdb|1YMM|A Chain A, TcrHLA-Dr2bMBP-Peptide Complex
Length = 191
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 12 IYSMKYDVYSYGVLLLQIIS-GKRTSRYYGPNQDLNLLEFAYEL 54
IY+ + DV+S+GVLL +I++ G P + NLL+ + +
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
>pdb|3PDO|A Chain A, Crystal Structure Of Hla-Dr1 With Clip102-120
pdb|3PGC|A Chain A, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped
Peptide Orientation
pdb|3PGC|D Chain D, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped
Peptide Orientation
pdb|3PGD|A Chain A, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical
Peptide Orientation
pdb|3PGD|D Chain D, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical
Peptide Orientation
pdb|4AH2|A Chain A, Hla-Dr1 With Covalently Linked Clip106-120 In Canonical
Orientation
Length = 193
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 14 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 66
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 67 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 114
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + Y K DV+S+G++L +II
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|4AEN|A Chain A, Hla-Dr1 With Covalently Linked Clip106-120 In Reversed
Orientation
Length = 207
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 28 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 80
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 81 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 128
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1AQD|A Chain A, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|D Chain D, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|G Chain G, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
pdb|1AQD|J Chain J, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility
Protein (Extracellular Domain) Complexed With Endogenous
Peptide
Length = 192
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
GY+ PE +RK Y D+++ GV+L ++ G
Sbjct: 189 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLL------EFAYELW 55
Y+ PE +++ +Y D ++ GVLL +++ G + + N+D +L E Y W
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH--APFEAENED-DLFEAILNDEVVYPTW 246
Query: 56 KNEEGT 61
+E+ T
Sbjct: 247 LHEDAT 252
>pdb|2WBJ|A Chain A, Tcr Complex
pdb|2WBJ|E Chain E, Tcr Complex
Length = 194
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 27.7 bits (60), Expect = 2.3, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y+ PE + Y D +++GVLL ++++G+ + + G ++D
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDED 548
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIIS-GKRTSRYYGPNQDLNLLEFAYELWKNEEGTEF 63
PE YS K DV+++G+L+ ++ S GK Y N ++ L K +G
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLY-TNSEVVL--------KVSQGHRL 224
Query: 64 FDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
+ P L + QI C E RP ++L+
Sbjct: 225 YRPHLASDT-------IYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 242
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+PPE + ++ K D++S GVL + + G
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+PPE + ++ K D++S GVL + + G
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++ PE + +Y+ + DV+S+GVL+ +I +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 215
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 215
>pdb|4FQX|A Chain A, Crystal Structure Of Hla-Dm Bound To Hla-Dr1
pdb|4GBX|A Chain A, Crystal Structure Of An Immune Complex At Ph 6.5
Length = 191
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAC 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + Y D ++YGVLL ++++G+
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAY 52
Y+ PE ++ YS++ D++S G+ L+++ G RY P D LE +
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVG----RYPIPPPDAKELELMF 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE R + DVYS G +L ++++G+
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + DV+S G ++ ++ GK
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEE 59
Y+ PE V Y+ D +S+G+L+ ++++G Y P D N ++ YE N E
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAG------YTPFYDSNTMK-TYEKILNAE 219
>pdb|1F3J|A Chain A, Histocompatibility Antigen I-Ag7
pdb|1F3J|D Chain D, Histocompatibility Antigen I-Ag7
Length = 182
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 59 EGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAADRPAVLEILTMLNNET-ANIKV 114
+G E F LD + W+L Q+ L Q +N A L ILT +N T A +
Sbjct: 28 DGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNFTPATNEA 87
Query: 115 PRKPAFSVKSDEDECIPEVKICSVND 140
P+ F KS P IC V++
Sbjct: 88 PQATVFP-KSPVLLGQPNTLICFVDN 112
>pdb|3QXD|A Chain A, F54c Hla-Dr1 Bound With Clip Peptide
pdb|3QXD|D Chain D, F54c Hla-Dr1 Bound With Clip Peptide
Length = 182
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFMFDF----DGDEIFHVDMAKKETVWRLEEFGRFASCEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI+T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 27/104 (25%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKN-----EE 59
PE +KG YS+K D++S G+ +++ L +L F Y+ W ++
Sbjct: 227 PELNQKG-YSVKSDIWSLGITMIE----------------LAILRFPYDSWGTPFQQLKQ 269
Query: 60 GTEFFDPSL-DDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
E P L D SA + C+++N+ +RP E++
Sbjct: 270 VVEEPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELM 309
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ P+ +L+ ++ + + KN
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPKNNP-- 236
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
P+L+ + S + C+ + + RP E+L
Sbjct: 237 ----PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELL 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ P+ +L+ ++ + + KN
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPKNN--- 220
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
P+L+ + S + C+ + + RP E+L
Sbjct: 221 ---PPTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++PPE + ++ + DV+S+GV+L +I +
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ P+ +L+ ++ + + KN
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPKNN--- 220
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
P+L+ + S + C+ + + RP E+L
Sbjct: 221 ---PPTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELL 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/106 (19%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS-GKRTSRYYGPNQDLNLLEFAYELWKNEEG 60
+ PE + ++ DV+S+G+++ ++++ G+R ++ + + + L
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL------ 269
Query: 61 TEFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILTMLN 106
P+ D SA Q+ + C Q+ A RP +I+++L+
Sbjct: 270 -----PTPMDCPSA-----IYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 16/101 (15%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
++ PE +++ Y K D++S G+ +++ G+ P+ +L+ ++ + + KN
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEP------PHSELHPMKVLFLIPKNNP-- 241
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
P+L+ + S + C+ + + RP E+L
Sbjct: 242 ----PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELL 274
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
Y+PPE + +++ K D++ GVL +++ G
Sbjct: 187 YLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEF 50
++ PE +R + K DVYS+GV+L ++ + ++ P Q + + F
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y PE + + Y D++S GV+L ++SG+
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++PPE + ++ + DV+S+GV+L +I +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++PPE + ++ + DV+S+GV+L +I +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEF 50
++ PE +R + K DVYS+GV+L ++ + ++ P Q + + F
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE + K +S + D++S G +L ++ GK P + L E + KNE
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK------PPFETSCLKETYIRIKKNE--- 258
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
+ + A L+R M + + RP+V E+LT
Sbjct: 259 --YSVPRHINPVASALIRRM------LHADPTLRPSVAELLT 292
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE + K +S + D++S G +L ++ GK P + L E + KNE
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK------PPFETSCLKETYIRIKKNE--- 258
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
+ + A L+R M + + RP+V E+LT
Sbjct: 259 --YSVPRHINPVASALIRRM------LHADPTLRPSVAELLT 292
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQD 44
Y+ PE + Y D +++GVLL ++++G+ + + G ++D
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDED 227
>pdb|1ES0|A Chain A, Crystal Structure Of The Murine Class Ii Allele I-A(G7)
Complexed With The Glutamic Acid Decarboxylase (Gad65)
Peptide 207-220
pdb|3CUP|A Chain A, Crystal Structure Of The Mhc Class Ii Molecule I-Ag7 In
Complex With The Peptide Gad221-235
pdb|3MBE|A Chain A, Tcr 21.30 In Complex With Mhc Class Ii I-Ag7hel(11-27)
pdb|3MBE|E Chain E, Tcr 21.30 In Complex With Mhc Class Ii I-Ag7hel(11-27)
Length = 190
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 59 EGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAADRPAVLEILTMLNNET-ANIKV 114
+G E F LD + W+L Q+ L Q +N A L ILT +N T A +
Sbjct: 31 DGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNFTPATNEA 90
Query: 115 PRKPAFSVKSDEDECIPEVKICSVND 140
P+ F KS P IC V++
Sbjct: 91 PQATVFP-KSPVLLGQPNTLICFVDN 115
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 21/30 (70%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIIS 31
++PPE + ++ + DV+S+GV+L +I +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGT 61
Y+ PE + K +S + D++S G +L ++ GK P + L E + KNE
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK------PPFETSCLKETYIRIKKNE--- 258
Query: 62 EFFDPSLDDSSSAWKLMRCMQIALLCVQENAADRPAVLEILT 103
+ + A L+R M + + RP+V E+LT
Sbjct: 259 --YSVPRHINPVASALIRRM------LHADPTLRPSVAELLT 292
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 13 YSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSS 72
Y K D++S+G+ +++ +G Y P + L L +N+ PSL+
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML------TLQNDP------PSLETGV 251
Query: 73 SAWKLMR-----CMQIALLCVQENAADRPAVLEIL 102
++++ ++ LC+Q++ RP E+L
Sbjct: 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
+V PE + + Y D++S GVLL +++G
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 17/95 (17%)
Query: 13 YSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSS 72
Y K D++S+G+ +++ +G Y P + L L +N+ PSL+
Sbjct: 199 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLML------TLQNDP------PSLETGV 246
Query: 73 SAWKLMR-----CMQIALLCVQENAADRPAVLEIL 102
++++ ++ LC+Q++ RP E+L
Sbjct: 247 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIIS 31
PE + I+S + DV+S+GV+L ++ +
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIIS 31
PE + I+S + DV+S+GV+L ++ +
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1IAO|A Chain A, Class Ii Mhc I-Ad In Complex With Ovalbumin Peptide
323-339
pdb|2IAD|A Chain A, Class Ii Mhc I-ad In Complex With An Influenza
Hemagglutinin Peptide 126-138
Length = 194
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Query: 59 EGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAADRPAVLEILTMLNNET-ANIKV 114
+G E F LD + W+L Q+ L Q +N A L ILT +N T A +
Sbjct: 31 DGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNFTPATNEA 90
Query: 115 PRKPAFSVKSDEDECIPEVKICSVND 140
P+ F KS P IC V++
Sbjct: 91 PQATVFP-KSPVLLGQPNTLICFVDN 115
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE + K +S + D++S G +L ++ GK
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDL 45
++ PE V++ Y DV+ GV+L ++SG +YG + L
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 242
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDL 45
++ PE V++ Y DV+ GV+L ++SG +YG + L
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 240
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIIS 31
PE + I+S + DV+S+GV+L ++ +
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 27/106 (25%)
Query: 3 VPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDLNLLEFAYELWKN----- 57
+ PE +KG YS+K D++S G+ +++ L +L F Y+ W
Sbjct: 181 INPELNQKG-YSVKSDIWSLGITMIE----------------LAILRFPYDSWGTPFQQL 223
Query: 58 EEGTEFFDPSL-DDSSSAWKLMRCMQIALLCVQENAADRPAVLEIL 102
++ E P L D SA + C+++N+ +RP E++
Sbjct: 224 KQVVEEPSPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELM 265
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGPNQDL 45
++ PE V++ Y DV+ GV+L ++SG +YG + L
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 240
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 5 PEYVRKGIYSMKYDVYSYGVLLLQIIS 31
PE + I+S + DV+S+GV+L ++ +
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
+V PE +++ Y D++S G+LL +++G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
+V PE +++ Y D++S G+LL +++G
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 8/32 (25%), Positives = 22/32 (68%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
++ PE + + Y + D++S G++++++I G+
Sbjct: 207 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|1R5I|A Chain A, Crystal Structure Of The Mam-Mhc Complex
pdb|1R5I|E Chain E, Crystal Structure Of The Mam-Mhc Complex
Length = 181
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + W+L + A Q N A
Sbjct: 13 YLNPDQSG---EFXFDF----DGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAV 65
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI T +N T VP + S + P V IC ++ T
Sbjct: 66 DKANLEIXTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 113
>pdb|2OJE|A Chain A, Mycoplasma Arthritidis-Derived Mitogen Complexed With
Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE
OF EDTA
pdb|2OJE|E Chain E, Mycoplasma Arthritidis-Derived Mitogen Complexed With
Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE
OF EDTA
Length = 180
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + W+L + A Q N A
Sbjct: 12 YLNPDQSG---EFXFDF----DGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAV 64
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI T +N T VP + S + P V IC ++ T
Sbjct: 65 DKANLEIXTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 112
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2ICW|A Chain A, Crystal Structure Of A Complete Ternary Complex Between
Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule
pdb|2ICW|D Chain D, Crystal Structure Of A Complete Ternary Complex Between
Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule
Length = 179
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 38 YYGPNQDLNLLEFAYELWKNEEGTEFFDPSLDDSSSAWKLMRCMQIALLCVQ---ENAAD 94
Y P+Q EF ++ +G E F + W+L + A Q N A
Sbjct: 11 YLNPDQSG---EFXFDF----DGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAV 63
Query: 95 RPAVLEILTMLNNETANIKVPRKPAFSVKSDEDECIPEVKICSVNDAT 142
A LEI T +N T VP + S + P V IC ++ T
Sbjct: 64 DKANLEIXTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFT 111
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISGK 33
Y+ PE ++ YS++ D++S G+ L+++ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 16/84 (19%)
Query: 1 GYVPPEYVRKGIYSMKYDVYSYGVLLLQIISGKRTSRYYGP---NQDLNLLEFAYELWKN 57
GYV PE + + YS D +S GV+ ++ G Y P + L E K
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCG------YPPFYEETESKLFE------KI 219
Query: 58 EEG-TEFFDPSLDDSSSAWKLMRC 80
+EG EF P DD S + K C
Sbjct: 220 KEGYYEFESPFWDDISESAKDFIC 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 2 YVPPEYVRKGIYSMKYDVYSYGVLLLQIISG 32
+V PE + + Y D++S GVLL ++G
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,555,932
Number of Sequences: 62578
Number of extensions: 173469
Number of successful extensions: 1048
Number of sequences better than 100.0: 414
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 649
Number of HSP's gapped (non-prelim): 419
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)